Your job contains 1 sequence.
>043190
VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA
ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP
QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW
GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL
RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGW
DEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKI
SILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVD
RQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYL
GYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSEL
FTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTS
HTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTIS
AELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMAL
LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISS
QTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM
NSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQM
VLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAE
GLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDT
SLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFS
RLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDS
ALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPRIQVK
LRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYAL
KRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQSVI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043190
(1492 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 4088 0. 2
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 4085 0. 2
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 4080 0. 2
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 4067 0. 2
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 4065 0. 2
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 4001 0. 2
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 3977 0. 1
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ... 3831 0. 2
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 3791 0. 2
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he... 3500 0. 1
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co... 3468 0. 2
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch... 3457 0. 1
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer... 3440 0. 2
UNIPROTKB|O75643 - symbol:SNRNP200 "U5 small nuclear ribo... 3434 0. 1
UNIPROTKB|E1BH78 - symbol:LOC100850262 "Uncharacterized p... 3430 0. 1
UNIPROTKB|F1LNJ2 - symbol:Ascc3l1 "Protein Ascc3l1" speci... 3420 0. 1
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150... 3389 0. 1
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ... 3378 0. 1
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat... 3326 0. 2
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi... 3310 0. 1
FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie... 3291 0. 1
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 3054 0. 1
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 3054 0. 1
ASPGD|ASPL0000051297 - symbol:AN10194 species:162425 "Eme... 2919 3.5e-304 1
DICTYBASE|DDB_G0270042 - symbol:ascc3l "U5 small nuclear ... 2898 5.9e-302 1
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit... 2786 4.4e-290 1
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh... 2328 5.6e-254 3
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 1602 2.4e-234 2
SGD|S000000974 - symbol:BRR2 "RNA-dependent ATPase RNA he... 2008 1.2e-207 1
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 805 2.5e-206 5
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 805 2.5e-206 5
GENEDB_PFALCIPARUM|PFD1060w - symbol:PFD1060w "u5 small n... 651 5.6e-176 6
UNIPROTKB|Q8IFP1 - symbol:PFD1060w "U5 small nuclear ribo... 651 5.6e-176 6
UNIPROTKB|B4E0P5 - symbol:SNRNP200 "U5 small nuclear ribo... 1268 3.2e-129 1
UNIPROTKB|F1RYR3 - symbol:LOC100517018 "Uncharacterized p... 1189 7.4e-121 1
UNIPROTKB|F1SU36 - symbol:SNRNP200 "Uncharacterized prote... 1062 3.3e-107 1
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 933 6.8e-93 1
UNIPROTKB|I3LAA7 - symbol:I3LAA7 "Uncharacterized protein... 921 1.4e-91 1
UNIPROTKB|I3LT20 - symbol:LOC100525691 "Uncharacterized p... 860 5.3e-85 1
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN... 882 5.4e-85 1
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 888 2.4e-84 2
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ... 888 3.0e-84 2
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ... 870 1.1e-83 1
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 868 3.6e-82 2
UNIPROTKB|F1SU44 - symbol:F1SU44 "Uncharacterized protein... 825 3.1e-81 1
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot... 838 4.6e-80 1
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 810 1.3e-79 1
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 785 3.0e-75 1
ASPGD|ASPL0000030426 - symbol:AN5514 species:162425 "Emer... 526 8.0e-70 2
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:... 725 2.5e-68 1
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 712 9.1e-67 1
UNIPROTKB|H9L351 - symbol:H9L351 "Uncharacterized protein... 665 4.4e-64 1
UNIPROTKB|I3LAH4 - symbol:I3LAH4 "Uncharacterized protein... 526 3.1e-49 1
UNIPROTKB|H9L1I7 - symbol:SNRNP200 "Uncharacterized prote... 427 2.2e-36 1
UNIPROTKB|F1PXD9 - symbol:POLQ "Uncharacterized protein" ... 233 5.0e-29 2
UNIPROTKB|F1NYH9 - symbol:HELQ "Uncharacterized protein" ... 350 9.5e-28 1
UNIPROTKB|F1NMU1 - symbol:POLQ "Uncharacterized protein" ... 202 3.4e-26 2
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO... 337 1.1e-24 2
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 198 1.9e-24 2
UNIPROTKB|E1BMC0 - symbol:POLQ "Uncharacterized protein" ... 195 7.1e-24 2
FB|FBgn0002905 - symbol:mus308 "mutagen-sensitive 308" sp... 212 2.0e-23 3
MGI|MGI:2176740 - symbol:Helq "helicase, POLQ-like" speci... 300 2.6e-22 1
UNIPROTKB|D4A4G4 - symbol:Hfm1 "Protein Hfm1" species:101... 285 3.5e-22 1
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the... 198 4.6e-22 3
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)... 198 4.7e-22 3
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71... 195 6.7e-22 4
WB|WBGene00020964 - symbol:polq-1 species:6239 "Caenorhab... 295 1.7e-21 1
ZFIN|ZDB-GENE-060503-421 - symbol:helq "helicase, POLQ-li... 291 2.2e-21 1
UNIPROTKB|J9P160 - symbol:HELQ "Uncharacterized protein" ... 291 2.4e-21 1
UNIPROTKB|E2RST3 - symbol:HELQ "Uncharacterized protein" ... 291 2.5e-21 1
UNIPROTKB|E9PSY5 - symbol:Helq "Protein Helq" species:101... 281 1.7e-20 1
UNIPROTKB|E9PT19 - symbol:Helq "Protein Helq" species:101... 281 2.0e-20 1
UNIPROTKB|Q8TDG4 - symbol:HELQ "Helicase POLQ-like" speci... 279 4.8e-20 1
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab... 274 1.3e-19 1
UNIPROTKB|F1RVE2 - symbol:HELQ "Uncharacterized protein" ... 265 1.5e-18 1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 176 1.8e-18 3
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 203 2.2e-18 2
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 216 3.1e-18 3
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 201 4.1e-18 2
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 181 5.5e-18 2
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 199 1.0e-17 2
FB|FBgn0002899 - symbol:mus301 "mutagen-sensitive 301" sp... 174 1.0e-17 2
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 185 3.4e-17 3
RGD|1560014 - symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box po... 167 7.7e-17 2
UNIPROTKB|H9L353 - symbol:H9L353 "Uncharacterized protein... 222 7.9e-17 1
TAIR|locus:2020573 - symbol:EMB25 "EMBRYO DEFECTIVE 25" s... 165 1.9e-16 3
UNIPROTKB|Q8IY21 - symbol:DDX60 "Probable ATP-dependent R... 172 2.3e-16 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 179 2.7e-16 2
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 186 3.8e-16 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 175 3.9e-16 4
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 170 4.2e-16 2
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 177 8.1e-16 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 193 1.1e-15 3
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 188 1.1e-15 2
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 186 1.4e-15 2
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 184 2.3e-15 2
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 184 2.4e-15 2
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 179 3.0e-15 2
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 184 3.0e-15 2
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 184 3.1e-15 2
WARNING: Descriptions of 56 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 4088 (1444.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 774/1344 (57%), Positives = 993/1344 (73%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLFFFD +RP+PL Q ++GI N
Sbjct: 635 VESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFFFDGRFRPVPLGQTFLGIKSANKV 694
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F P
Sbjct: 695 QQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNNGQICYFLPTQGP 754
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ +K V KSRN+ + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 755 EYGHAEKQVQKSRNRQVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAW 814
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+IKGTQ+Y K G + DLG+LD IFGRAGRPQFD+ GEGIIIT+HDKL+
Sbjct: 815 GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS 874
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPL YG
Sbjct: 875 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYG 934
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L+ + LV + R LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 935 ISHKAYQIDPTLAKHREQLVIEVGRKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNT 994
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE+ H +S++ +VS + EF+ I VR+EE EL+TL+ C + GG N +
Sbjct: 995 IETFNELFDAHKTESDIFAIVSKAEEFDQIKVREEEIEELDTLLSNFCELSAPGGVENSY 1054
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1055 GKINILLQTYISRGEVDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSK 1114
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1115 VIDKRLWGWTSPLRQFSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVK 1173
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L+I+P+F+W D HG + WWI V+D +DHIY
Sbjct: 1174 QCVHQIPSVTMEASIQPITRTVLRVTLSISPDFSWNDQVHGTVGEPWWIWVEDPTNDHIY 1233
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1234 HSEYFLVLKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1293
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLPVTALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1294 ERHPPHTELLDLQPLPVTALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1353
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1354 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKVRIEEKLGKKVIELTGDVTP 1413
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +RNYVK+V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1414 DMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTILIIDEIHLLGEERGPVLEVIVSRT 1473
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1474 NFISSHTEKPVRIVGLSTALANARDLADWLNIRQMGLFNFRPSVRPVPLEVHIQGFPGQH 1533
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKP + AI +HSP KPVLIFVSSRRQTRLTAL+LI F A++E P+Q+L M E
Sbjct: 1534 YCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+++ ++ + D NL+ TL FGIG+HHAGL+++DR VEELF N KIQVL+ TSTLAWGV
Sbjct: 1594 REMENIIGTIRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGV 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1714 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLS 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS LV+ + +LE S C+++ ED ++EP G IAS YYL + TV MF
Sbjct: 1774 DVSHDSVNKFLSNLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFK 1833
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ E L ILS A EY +LPVRHNED+ N L++ + + + D PH KA+L
Sbjct: 1834 ERLKPECGTEELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHL 1893
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR LP DY TD K+VLDQ++R+ QAM+D+ A+ GWL + + L+QMV+QG
Sbjct: 1894 LLQAHLSRTMLPCPDYDTDTKTVLDQALRVCQAMLDVAAHQGWLVTVLNITSLVQMVIQG 1953
Query: 1314 LWFEQDSALWMFPCMNNDLLGTLR 1337
W + DS+L P + N L R
Sbjct: 1954 RWLK-DSSLLTIPHIENHHLHIFR 1976
Score = 984 (351.4 bits), Expect = 4.7e-103, Sum P(3) = 4.7e-103
Identities = 259/818 (31%), Positives = 422/818 (51%)
Query: 650 HNLALPQARTSHTELLDL----KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDN 705
+N + + +TE + + KP+ + L A N IQ+ +F Y+T+
Sbjct: 434 NNKIYEEVKIPYTEPMPIGFEEKPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNE 493
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNT--------QSDMKVVYIAPLKAIVRERMNDWKDR 757
N+L+ APTG+GKT A L +LH +++ K+VY+AP+KA+ E N + R
Sbjct: 494 NMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKR 553
Query: 758 LVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDE 816
L LG + E+TGD +L ++++TPEKWD ++R + + V L+ILDE
Sbjct: 554 L-EPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 612
Query: 817 IHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFN 874
+HLL +RGP+LE IV+R +R + S T+ +R +GLS L N D+A +L V IGLF
Sbjct: 613 VHLLHEDRGPVLESIVARTLRQVES-TQSMIRILGLSATLPNYLDVATFLHVNPCIGLFF 671
Query: 875 FKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLT 933
F RPVPL G ++N+M++ Y ++ V++FV +R T T
Sbjct: 672 FDGRFRPVPLGQTFLGIKSANKVQQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRT 731
Query: 934 ALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQF---GIGLHHAGLNDKDR 990
A+ LI+ A ++ FL + QV RQ + G +HHAG+ +DR
Sbjct: 732 AMSLIERAKNNGQICYFLPTQGPEYGHAEKQVQKSRNRQVRELFPDGFSIHHAGMLRQDR 791
Query: 991 SLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMG 1050
+LVE LF+N I+VLVCT+TLAWGVNLPAH VIIKGT+ Y K +VD I D++Q+ G
Sbjct: 792 NLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFG 851
Query: 1051 RAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKE 1110
RAGRPQ+D+ G+ +I+ K S Y L + P+ES + L D+ NAEI GT+ + E
Sbjct: 852 RAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVE 911
Query: 1111 DAVHYLSWTYLFRRLAINPAYYGLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTE 1167
+AV ++S+TYL+ R+ NP YG+ + L+ + +LV L+ + ++ E
Sbjct: 912 EAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTLAKHREQLVIEVGRKLDKARMIRFEE 971
Query: 1168 DT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPD-TSLEVFLHILSGASEYDELPVRHNE 1224
T T LG AS YY+ Y T+ F T ++F I+S A E+D++ VR E
Sbjct: 972 RTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTESDIFA-IVSKAEEFDQIKVREEE 1030
Query: 1225 -DNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRI 1283
+ + LS + +++ + K N+L Q + SR ++ ++D V + RI
Sbjct: 1031 IEELDTLLSNFCELSAPGG-VENSYGKINILLQTYISRGEVDSFSLISDSAYVAQNAARI 1089
Query: 1284 IQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGIST 1343
++A+ +I W + + ++L +++ + LW S L F + +L L + + T
Sbjct: 1090 VRALFEIALRKRWPAMTYRLLNLSKVIDKRLW-GWTSPLRQFSVLPPHILTRLEEKNL-T 1147
Query: 1344 VQQLLDIPKENLQTVIGNFPVS-RLHQDLQRFPRIQVKLRLQ--RRDIDGENSLTLNIRM 1400
V +L D+ K+ + ++ + + ++ Q + + P + ++ +Q R + +TL+I
Sbjct: 1148 VDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTV---LRVTLSISP 1204
Query: 1401 DKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELY 1438
D SW + E WW+ + + +Y
Sbjct: 1205 DF--SWNDQVHGTV-------GEPWWIWVEDPTNDHIY 1233
Score = 135 (52.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 41/117 (35%), Positives = 58/117 (49%)
Query: 1382 RLQRRDIDGENSLTLNIRMDKM--NSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYA 1439
R R D E L ++++ + + K S A RFPK KDE W+L+LG + EL A
Sbjct: 2070 RWVRLHADQEYVLQVSLQRVSLGFHKGKQDSHAVTPRFPKSKDEGWFLILGEVDKRELIA 2129
Query: 1440 LKRISFSDRLNTHMELPSGITT-FQGM---KLVVVSDCYLGFEQEHSIEALVEQSVI 1492
LKR+ + + HM S T G L +SDCYLG +Q++ I V + I
Sbjct: 2130 LKRVGYVR--SHHMVSISFYTPEVPGRYIYTLYFMSDCYLGLDQQYDIHLHVTPASI 2184
Score = 38 (18.4 bits), Expect = 4.7e-103, Sum P(3) = 4.7e-103
Identities = 8/20 (40%), Positives = 8/20 (40%)
Query: 332 FDEKSGNFYCTELGRIASHF 351
F S C RI SHF
Sbjct: 122 FPSSSATAACDATNRITSHF 141
Score = 37 (18.1 bits), Expect = 6.0e-103, Sum P(3) = 6.0e-103
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 534 RLVKQYLGYFPSIQLSATVSPITR 557
+ +KQ G FPS +A R
Sbjct: 113 KAIKQMFGPFPSSSATAACDATNR 136
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 4085 (1443.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 771/1333 (57%), Positives = 987/1333 (74%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++GI N
Sbjct: 636 VESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSTNKM 695
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F P
Sbjct: 696 QQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPTEGP 755
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ K V KSRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 756 EYGHALKQVQKSRNKQVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW 815
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH VVIKGTQ+Y K G + DLG+LD IFGRAGRPQFD+ GEGIIIT+HDKL+
Sbjct: 816 GVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS 875
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPLAYG
Sbjct: 876 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYVRMRANPLAYG 935
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L + L+ + + LDKAKM+RF+E++G F T+LGR ASHFYI+Y++
Sbjct: 936 ISHKAYQIDPTLRKHREQLLIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHFYIKYNT 995
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE+ H + ++ +VS + EF+ I VR+EE EL+ L+ C + GG N +
Sbjct: 996 IETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVENSY 1055
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1056 GKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSK 1115
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1116 VIDKRLWGWASPLRQFSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVK 1174
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L I P+F+W D HG + WWI V+D +DHIY
Sbjct: 1175 QCVHQIPSVTMEASIQPITRTVLRVSLNIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHIY 1234
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1235 HSEYFLALKKQVINKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1294
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLP+TALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1295 ERHPPHTELLDLQPLPITALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1354
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1355 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKIRIEEKLGKKVIELTGDVTP 1414
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +R+YV++V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1415 DMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNILIIDEIHLLGEERGPVLEVIVSRT 1474
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1475 NFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQH 1534
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKPA+ AI +HSP KPVLIFVSSRRQTRLTAL+LI F A++E P+Q+L M E
Sbjct: 1535 YCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDE 1594
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+++ ++ V D NL+ TL FGIG+HHAGL+++DR VEELF N K+QVL+ TSTLAWGV
Sbjct: 1595 QEMDNIIGTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGV 1654
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1655 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1714
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1715 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLG 1774
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS L+ + +LE S C+++ ED T+EP G IAS YYL + TV MF
Sbjct: 1775 DVSQDSINKFLSHLIGQSLVELELSHCIEVGEDNRTIEPLTCGRIASYYYLKHKTVKMFK 1834
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ S E L ILS A EY +LPVRHNED+ N L++ + ++ + D PH KA+L
Sbjct: 1835 DRLKPECSTEELLSILSDAEEYTDLPVRHNEDHTNNELAKCLPIELNPHSFDSPHTKAHL 1894
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR LP DY TD K+VLDQ++R+ QAM+D+ A+ GWL + + HL+QMV+QG
Sbjct: 1895 LLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTVLNITHLIQMVIQG 1954
Query: 1314 LWFEQDSALWMFP 1326
W + DS+L P
Sbjct: 1955 RWLK-DSSLLTIP 1966
Score = 986 (352.1 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 253/795 (31%), Positives = 413/795 (51%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
KP+ + L A N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH
Sbjct: 457 KPVYIKDLDEVGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILH 516
Query: 728 LFNT--------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA 779
+++ K+VY+AP+KA+ E N + RL LG + E+TGD
Sbjct: 517 EIRQHFHQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRL-EPLGIVVKELTGDMQLSKSE 575
Query: 780 LLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRY 837
+L ++++TPEKWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R
Sbjct: 576 ILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQ 635
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFY 896
+ S T+ +R +GLS L N D+A +L V IGLF F RPVPL G
Sbjct: 636 VES-TQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSTNK 694
Query: 897 CPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
++N+M++ Y ++ V++FV +R T TA+ LI+ A + FL
Sbjct: 695 MQQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPTEG 754
Query: 956 EDLQMVLSQVT---DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ L QV ++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLA
Sbjct: 755 PEYGHALKQVQKSRNKQVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLA 814
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAH V+IKGT+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K
Sbjct: 815 WGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 874
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
S Y L + P+ES + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP Y
Sbjct: 875 SHYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYVRMRANPLAY 934
Query: 1133 GLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYV 1187
G+ + L + +L+ + L+ + ++ E T T LG AS +Y+ Y
Sbjct: 935 GISHKAYQIDPTLRKHREQLLIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHFYIKYN 994
Query: 1188 TVSMFGSNIGPD-TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDD 1246
T+ F T ++F I+S A E+D++ VR E +AL +++
Sbjct: 995 TIETFNELFDAHKTEGDIFA-IVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVEN 1053
Query: 1247 PHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHL 1306
+ K N+L Q + SR ++ ++D V + RI++A+ +I W + + ++L
Sbjct: 1054 SYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNL 1113
Query: 1307 LQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVS- 1365
+++ + LW S L F + +L L + + TV +L D+ K+ + ++ + +
Sbjct: 1114 SKVIDKRLW-GWASPLRQFSVLPPHILTRLEEKNL-TVDKLKDMRKDEIGHILHHVNIGL 1171
Query: 1366 RLHQDLQRFPRIQVKLRLQ--RRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDE 1423
++ Q + + P + ++ +Q R + ++LNI D SW + E
Sbjct: 1172 KVKQCVHQIPSVTMEASIQPITRTV---LRVSLNIHPDF--SWNDQVHGTV-------GE 1219
Query: 1424 AWWLVLGNTNTSELY 1438
WW+ + + +Y
Sbjct: 1220 PWWIWVEDPTNDHIY 1234
Score = 142 (55.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 1407 KNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQ--G 1464
K+ + A RFPK+KDE W+L+LG + EL A+KR+ F + TH + T + G
Sbjct: 2098 KHENHAVTPRFPKLKDEGWFLILGEVDKRELMAVKRVGF---VRTHHDASISFFTPETPG 2154
Query: 1465 ---MKLVVVSDCYLGFEQEHSI 1483
L ++SDCYLG +Q++ I
Sbjct: 2155 RYIFTLYLMSDCYLGLDQQYDI 2176
Score = 42 (19.8 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 332 FDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEV 374
F S C RI SHF + + +M ND V
Sbjct: 122 FPSSSATSACNATNRIISHF--SQDDLTAFVQMAENPCNDRVV 162
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 4080 (1441.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 769/1333 (57%), Positives = 987/1333 (74%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++G+ N
Sbjct: 635 VESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKV 694
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F
Sbjct: 695 QQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPSQGS 754
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ +K V KSRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 755 EYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW 814
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+IKGTQ+Y K G + DLG+LD IFGRAGRPQFDR GEGIIIT+HDKL+
Sbjct: 815 GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKLS 874
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPL YG
Sbjct: 875 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYG 934
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L+ + LV + R LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 935 ISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNT 994
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE H +S++ +VS + EF+ I VR+EE EL+ L+ C + GG N +
Sbjct: 995 IETFNEFFDAHKTESDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELAAPGGVENSY 1054
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1055 GKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSK 1114
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1115 VIDKRLWGWASPLRQFSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVK 1173
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L+I P+FTW D HG + WWI V+D +DHIY
Sbjct: 1174 QCVHQIPSVTMEASIQPITRTVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIY 1233
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1234 HSEYFLVLKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1293
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLP+TALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1294 ERHPPHTELLDLQPLPITALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1353
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1354 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKVRIEEKLGKKVIELTGDVTP 1413
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +RNYVK+V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1414 DMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTILIIDEIHLLGEERGPVLEVIVSRT 1473
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1474 NFISSHTEKPVRIVGLSTALANARDLADWLNIHQMGLFNFRPSVRPVPLEVHIQGFPGQH 1533
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKP + AI +HSP KPVLIFVSSRRQTRLTAL+LI F A++E P+Q+L M E
Sbjct: 1534 YCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+++ ++ + D NL+ TL FGIG+HHAGL+++DR VEELF N K+QVL+ TSTLAWGV
Sbjct: 1594 REMENIIGTLRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGV 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1714 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLS 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS LV+ + +LE S C+++ ED ++EP G IAS YYL + TV MF
Sbjct: 1774 DVSHDSVNKFLSSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFK 1833
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ E L ILS A EY +LPVRHNED+ N L++ + + + D PH KA+L
Sbjct: 1834 ERLKPECGTEELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHL 1893
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR LP DY TD K+VLDQ++R+ QAM+D+ AN GWL +++ +L+QMV+QG
Sbjct: 1894 LLQAHLSRTMLPCPDYDTDTKTVLDQALRVCQAMLDVAANQGWLVTALNITNLVQMVIQG 1953
Query: 1314 LWFEQDSALWMFP 1326
W + DS+L P
Sbjct: 1954 RWLK-DSSLLSIP 1965
Score = 980 (350.0 bits), Expect = 2.6e-103, Sum P(3) = 2.6e-103
Identities = 244/739 (33%), Positives = 393/739 (53%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
KP+ + L A N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH
Sbjct: 456 KPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLH 515
Query: 728 LFNT--------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA 779
+++ K+VY+AP+KA+ E N + RL LG + E+TGD
Sbjct: 516 EIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRL-EPLGIVVKELTGDMQLSKNE 574
Query: 780 LLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRY 837
+L ++++TPEKWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R
Sbjct: 575 ILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQ 634
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFY 896
+ S T+ +R +GLS L N D+A +L V IGLF F RPVPL G
Sbjct: 635 VES-TQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANK 693
Query: 897 CPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
++N+M++ Y ++ V++FV +R T TA+ LI+ A + FL
Sbjct: 694 VQQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPSQG 753
Query: 956 EDLQMVLSQVT---DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ QV ++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLA
Sbjct: 754 SEYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLA 813
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAH VIIKGT+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K
Sbjct: 814 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKL 873
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
S Y L + P+ES + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP Y
Sbjct: 874 SHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVY 933
Query: 1133 GLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYV 1187
G+ + L+ + +LV L+ + ++ E T T LG AS YY+ Y
Sbjct: 934 GISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYN 993
Query: 1188 TVSMFGSNIGPD-TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDD 1246
T+ F T ++F I+S A E+D++ VR E +AL +++
Sbjct: 994 TIETFNEFFDAHKTESDIFA-IVSKAEEFDQIKVREEEIEELDALLNNFCELAAPGGVEN 1052
Query: 1247 PHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHL 1306
+ K N+L Q + SR ++ ++D V + RI++A+ +I W + + ++L
Sbjct: 1053 SYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNL 1112
Query: 1307 LQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVS- 1365
+++ + LW S L F + +L L + + TV +L D+ K+ + ++ + +
Sbjct: 1113 SKVIDKRLW-GWASPLRQFSVLPPHILTRLEEKNL-TVDKLKDMRKDEIGHMLHHVNIGL 1170
Query: 1366 RLHQDLQRFPRIQVKLRLQ 1384
++ Q + + P + ++ +Q
Sbjct: 1171 KVKQCVHQIPSVTMEASIQ 1189
Score = 142 (55.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 1407 KNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITT-FQGM 1465
K S A RFPK+KDE W+L+LG + EL ALKR+ + N H+ S T G
Sbjct: 2097 KQDSHAVTPRFPKLKDEGWFLILGEVDKRELIALKRVGYVR--NHHVVSISFYTPELPGR 2154
Query: 1466 ---KLVVVSDCYLGFEQEHSIEALV-EQSV 1491
L ++SDCYLG +Q++ + V E SV
Sbjct: 2155 YIYTLYLMSDCYLGLDQQYDLHLHVTEASV 2184
Score = 38 (18.4 bits), Expect = 2.6e-103, Sum P(3) = 2.6e-103
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 534 RLVKQYLGYFPSIQLSATVSPITR 557
+ +KQ G FPS +A + R
Sbjct: 113 KAIKQMFGPFPSSSATAACNATNR 136
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 4067 (1436.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 771/1337 (57%), Positives = 991/1337 (74%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLFFFD +RP+PL Q ++GI N
Sbjct: 635 VESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFFFDGRFRPVPLGQTFLGIKCANKM 694
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F
Sbjct: 695 QQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNCGHIPFFFPTQGH 754
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
L +K V +SRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 755 DYVLAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW 814
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+IKGTQ+Y K G + DLG+LD IFGRAGRPQFD+ GEGIIIT+HDKL+
Sbjct: 815 GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS 874
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT + PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPLAYG
Sbjct: 875 HYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYG 934
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L + LV + R LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 935 ISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKYNT 994
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE+ H + ++ +VS + EF+ I VR+EE EL+TL+ C + GG N +
Sbjct: 995 IETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEIEELDTLLSNFCELSTPGGVENSY 1054
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1055 GKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSK 1114
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1115 VIDKRLWGWASPLRQFSI-LPPHILTRLEEKKLTVDKLKDMRKDEIGHILHHVNIGLKVK 1173
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L+I +FTW D HG + WWI V+D +DHIY
Sbjct: 1174 QCVHQIPSVMMEASIQPITRTVLRVTLSIYADFTWNDQVHGTVGEPWWIWVEDPTNDHIY 1233
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1234 HSEYFLALKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1293
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLP+TALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1294 ERHPPHTELLDLQPLPITALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1353
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1354 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKVRIEEKLGKKVIELTGDVTP 1413
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +RNYV++V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1414 DMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRT 1473
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1474 NFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQH 1533
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKPA+ AI +HSP KPVLIFVSSRRQTRLTAL+LI F A++E P+Q+L M E
Sbjct: 1534 YCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+++ +++ V D NL+ TL FGIG+HHAGL+++DR VEELF N K+QVL+ TSTLAWGV
Sbjct: 1594 REMENIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGV 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1714 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLG 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS L++ + +LE S C+++ ED ++EP G IAS YYL + TV MF
Sbjct: 1774 DVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFK 1833
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ S E L ILS A EY +LPVRHNED+ N L++ + + + D PH KA+L
Sbjct: 1834 DRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPIESNPHSFDSPHTKAHL 1893
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR LP DY TD K+VLDQ++R+ QAM+D+ AN GWL + + +L+QMV+QG
Sbjct: 1894 LLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAANQGWLVTVLNITNLIQMVIQG 1953
Query: 1314 LWFEQDSALWMFPCMNN 1330
W + DS+L P + N
Sbjct: 1954 RWLK-DSSLLTLPNIEN 1969
Score = 971 (346.9 bits), Expect = 6.0e-102, Sum P(3) = 6.0e-102
Identities = 258/818 (31%), Positives = 422/818 (51%)
Query: 650 HNLALPQARTSHTELLDL----KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDN 705
+N + R ++E + L KP+ + L A N IQ+ +F Y+T+
Sbjct: 434 NNKLYEEVRIPYSEPMPLSFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNE 493
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNT--------QSDMKVVYIAPLKAIVRERMNDWKDR 757
N+L+ APTG+GKT A L +LH +++ K+VY+AP+KA+ E M D+ R
Sbjct: 494 NMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAE-MTDYFSR 552
Query: 758 LVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDE 816
+ LG + E+TGD +L ++++TPEKWD ++R + + V L+ILDE
Sbjct: 553 RLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDE 612
Query: 817 IHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFN 874
+HLL +RGP+LE IV+R +R + S T+ +R +GLS L N D+A +L V IGLF
Sbjct: 613 VHLLHEDRGPVLESIVARTLRQVES-TQSMIRILGLSATLPNYLDVATFLHVNPYIGLFF 671
Query: 875 FKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLT 933
F RPVPL G ++N+M++ Y + V++FV +R T T
Sbjct: 672 FDGRFRPVPLGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRT 731
Query: 934 ALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT---DQNLRQTLQFGIGLHHAGLNDKDR 990
A+ LI+ A + F D + QV ++ +R+ G +HHAG+ +DR
Sbjct: 732 AMSLIERAKNCGHIPFFFPTQGHDYVLAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQDR 791
Query: 991 SLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMG 1050
+LVE LF+N I+VLVCT+TLAWGVNLPAH VIIKGT+ Y K +VD I D++Q+ G
Sbjct: 792 NLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFG 851
Query: 1051 RAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKE 1110
RAGRPQ+D+ G+ +I+ K S Y L + P+ES + L D+ NAEI GT+ + E
Sbjct: 852 RAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVE 911
Query: 1111 DAVHYLSWTYLFRRLAINPAYYGLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTE 1167
+AV ++S+TYL+ R+ NP YG+ + L + +LV L+ + ++ E
Sbjct: 912 EAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEE 971
Query: 1168 DT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPD-TSLEVFLHILSGASEYDELPVRHNE 1224
T T LG AS YY+ Y T+ F T ++F I+S A E+D++ VR E
Sbjct: 972 RTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFA-IVSKAEEFDQIKVREEE 1030
Query: 1225 -DNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRI 1283
+ + LS + +++ + K N+L Q + SR ++ ++D V + RI
Sbjct: 1031 IEELDTLLSNFCELSTPGG-VENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARI 1089
Query: 1284 IQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGIST 1343
++A+ +I W + + ++L +++ + LW S L F + +L L + + T
Sbjct: 1090 VRALFEIALRKRWPTMTYRLLNLSKVIDKRLW-GWASPLRQFSILPPHILTRLEEKKL-T 1147
Query: 1344 VQQLLDIPKENLQTVIGNFPVS-RLHQDLQRFPRIQVKLRLQ--RRDIDGENSLTLNIRM 1400
V +L D+ K+ + ++ + + ++ Q + + P + ++ +Q R + +TL+I
Sbjct: 1148 VDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVMMEASIQPITRTV---LRVTLSIYA 1204
Query: 1401 DKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELY 1438
D +W + E WW+ + + +Y
Sbjct: 1205 DF--TWNDQVHGTV-------GEPWWIWVEDPTNDHIY 1233
Score = 134 (52.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 1407 KNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITT-FQGM 1465
K S A RFPK KDE W+L+LG + EL ALKR+ + N H+ S T G
Sbjct: 2097 KPESCAVTPRFPKSKDEGWFLILGEVDKRELIALKRVGYIR--NHHVASLSFYTPEIPGR 2154
Query: 1466 ---KLVVVSDCYLGFEQEHSIEALVEQS 1490
L +SDCYLG +Q++ I V Q+
Sbjct: 2155 YIYTLYFMSDCYLGLDQQYDIYLNVTQA 2182
Score = 43 (20.2 bits), Expect = 6.0e-102, Sum P(3) = 6.0e-102
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 534 RLVKQYLGYFPSIQLSATVSPITRTVLKIG---LAITPEFTWKDH 575
+ +KQ G FPS +A + R + L + T K+H
Sbjct: 113 KAIKQMFGPFPSSSATAACNATNRIISHFSQDDLTALVQMTEKEH 157
Score = 38 (18.4 bits), Expect = 2.0e-101, Sum P(3) = 2.0e-101
Identities = 8/20 (40%), Positives = 8/20 (40%)
Query: 332 FDEKSGNFYCTELGRIASHF 351
F S C RI SHF
Sbjct: 122 FPSSSATAACNATNRIISHF 141
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 4065 (1436.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 774/1333 (58%), Positives = 984/1333 (73%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FDS +RP+PL Q +IGI N
Sbjct: 644 VESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDSRFRPVPLGQTFIGIKTTNKV 703
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ + GHQ MVFVH+R TV+TA L + A+ + F +
Sbjct: 704 QQLNHMDEVCYENVLKQIMAGHQVMVFVHARNATVRTAMALREKAKNNGHICHFLSPQGS 763
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+K V +SRNK L ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 764 DYGQAEKQVQRSRNKQLRELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAW 823
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH VVIKGTQ+Y K G + DLG+LD IFGRAGRPQFD+ GEGIIIT+HDKL+
Sbjct: 824 GVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS 883
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPL YG
Sbjct: 884 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYG 943
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP L + LV + R LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 944 ISHKAYQMDPGLEKHREQLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNT 1003
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE+ H + +++ +VS + EFE I VR+EE EL+TL+ C + GG N +
Sbjct: 1004 IETFNELFDAHKTEGDILAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNY 1063
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1064 GKINILLQTYISRGELDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSK 1123
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP +L KLEE+ +D++++M + +IG ++ + G VK
Sbjct: 1124 VIDKRLWGWVSPLRQFSV-LPPSVLSKLEEKNLTVDKMKDMRKDEIGHMLHHVKIGLKVK 1182
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PSI + AT+ PITRTVL++ L ITP+FTW D HG + WWI V+D +DHIY
Sbjct: 1183 QCVHQIPSIAMEATIQPITRTVLRVRLNITPDFTWNDQVHGTVGEPWWIWVEDPTNDHIY 1242
Query: 597 HSELFTLTKRMA-RGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F + K+ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1243 HSEYFIIQKKQVITKEPQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1302
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLPVTALG+ YE LY F+HFNPIQTQIFH LYHTD NVLLGAPTGS
Sbjct: 1303 ERHPPHTELLDLQPLPVTALGHPEYEVLYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGS 1362
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRER+ DWK R+ +LGK++VE+TGD TP
Sbjct: 1363 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTP 1422
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ A+ AD+I++TPEKWDG+SR+W +R+YV+KV ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1423 DMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVSILIIDEIHLLGDERGPVLEVIVSRT 1482
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1483 NFISSHTEKPVRVVGLSTALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQH 1542
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM MNKPA+ AI +HSP KPVLIFVSSRRQTRLT+LDLI F A+++ P+Q+L M E
Sbjct: 1543 YCPRMARMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTSLDLIAFLATEDDPKQWLKMDE 1602
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
++ ++ V D NL+ TL FGIG+HHAGL+++DR VEELF N KIQVL+ TSTLAWGV
Sbjct: 1603 REMNDIIGTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGV 1662
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVI+KGTEYYDGKT+RYVD+PITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1663 NFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1722
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL D L DH NAEI +GTI K+DA+ Y++WTY FRRL +NP YY L+
Sbjct: 1723 KKFLYEPFPVESSLLDVLADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLD 1782
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
+ + ++ YLS LV+ + DLE S C+++ ED T+EP G IAS YYL + T+ MF
Sbjct: 1783 NVSHDTMNKYLSSLVEKSLFDLECSYCIEIGEDNRTIEPLTYGRIASYYYLKHPTIGMFK 1842
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P++S+E L IL+ A EY +LPVRHNED N L++ + V+ + D H K +L
Sbjct: 1843 DQLKPESSVEELLLILTNADEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHL 1902
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAHFS LP DY TD K+VLDQ+IRI QAM+D+ A+ GWL +++ +L+QMV+QG
Sbjct: 1903 LLQAHFSHAILPCPDYATDTKTVLDQAIRICQAMLDVTAHHGWLVAALNITNLVQMVVQG 1962
Query: 1314 LWFEQDSALWMFP 1326
W DS+L P
Sbjct: 1963 RWIH-DSSLLTVP 1974
Score = 970 (346.5 bits), Expect = 9.3e-103, Sum P(3) = 9.3e-103
Identities = 241/724 (33%), Positives = 382/724 (52%)
Query: 682 ALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNT--------QS 733
A N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH +
Sbjct: 479 AFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHVQHGVIKKD 538
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+ K+VY+AP+KA+ E N + RL LG + E+TGD +L ++++TPEKW
Sbjct: 539 EFKIVYVAPMKALAAEMTNYFSKRL-EPLGITVKELTGDMQLSKGEILRTQMLVTTPEKW 597
Query: 794 DGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGL 851
D ++R + + V L+ILDE+HLL +RGP+LE IV+R +R + S T+ +R +GL
Sbjct: 598 DVVTRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESIVARTLRQVES-TQSMIRILGL 656
Query: 852 STALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAA 910
S L N D+A +L V IGLF F RPVPL G ++N M++ Y
Sbjct: 657 SATLPNYLDVATFLHVNPYIGLFYFDSRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYEN 716
Query: 911 ICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT--- 966
+ V++FV +R T TA+ L + A ++ FL D QV
Sbjct: 717 VLKQIMAGHQVMVFVHARNATVRTAMALREKAKNNGHICHFLSPQGSDYGQAEKQVQRSR 776
Query: 967 DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
++ LR+ G +HHAG+ +DRSLVE LF+N I+VLVCT+TLAWGVNLPAH V+IKG
Sbjct: 777 NKQLRELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKG 836
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVE 1086
T+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K S Y L + P+E
Sbjct: 837 TQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIE 896
Query: 1087 SSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAE---GLS 1143
S + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP YG+ + GL
Sbjct: 897 SQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLE 956
Query: 1144 SYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS 1201
+ +LV L+ + ++ E T T LG AS YY+ Y T+ F +
Sbjct: 957 KHREQLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKT 1016
Query: 1202 LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSR 1261
L I+S A E++++ VR E + L +++ + K N+L Q + SR
Sbjct: 1017 EGDILAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISR 1076
Query: 1262 LDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSA 1321
+L ++D V + RI++A+ +I W + + ++L +++ + LW S
Sbjct: 1077 GELDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLW-GWVSP 1135
Query: 1322 LWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVS-RLHQDLQRFPRIQVK 1380
L F + +L L + + TV ++ D+ K+ + ++ + + ++ Q + + P I ++
Sbjct: 1136 LRQFSVLPPSVLSKLEEKNL-TVDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIAME 1194
Query: 1381 LRLQ 1384
+Q
Sbjct: 1195 ATIQ 1198
Score = 144 (55.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 1389 DGENSLTLNIRMDKMN-SWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSD 1447
D E L ++++ +M K S+A A RFPK+KDE W+L+LG + EL ALKR +
Sbjct: 2087 DQEYVLQIHLQRTQMGYQGKQDSKAVAPRFPKVKDEGWFLILGEVDKKELIALKRTGYVR 2146
Query: 1448 RLNT-HMELPSGITTFQGM-KLVVVSDCYLGFEQEHSI 1483
NT + + T + + L ++SD YLG +Q++ I
Sbjct: 2147 NRNTVSVAFYTPETPGKCIYTLYLMSDSYLGMDQQYDI 2184
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 941 AASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHA-GLNDKDRSLVEELFAN 999
AA + T R EE L ++ +QN + FG + + ++D D S EEL N
Sbjct: 129 AACNATCRIASHFTEEQLTALIQMAEEQNGDNRVFFGKNIVFSFDMHDLDHS--EELPVN 186
Query: 1000 NK 1001
+
Sbjct: 187 GE 188
Score = 42 (19.8 bits), Expect = 9.3e-103, Sum P(3) = 9.3e-103
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 319 DAARALDKAKMMRFDEKSGNFYCTELGRIASHF 351
D +A+ K F S C RIASHF
Sbjct: 110 DETKAI-KQMFGPFPSSSATAACNATCRIASHF 141
Score = 37 (18.1 bits), Expect = 3.1e-102, Sum P(3) = 3.1e-102
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 534 RLVKQYLGYFPSIQLSATVSPITR 557
+ +KQ G FPS +A + R
Sbjct: 113 KAIKQMFGPFPSSSATAACNATCR 136
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 4001 (1413.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 753/1333 (56%), Positives = 979/1333 (73%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++GI N
Sbjct: 636 VESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKM 695
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F P
Sbjct: 696 QQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPTQGP 755
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ K V KSRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 756 EYGHALKQVQKSRNKQVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW 815
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+IKGTQ+Y K G + DLG+LD IFGRAGRPQFD+ GEGIIIT+HDKL+
Sbjct: 816 GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS 875
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPLAYG
Sbjct: 876 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAYG 935
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L + L+ + + LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 936 ISHKAYQMDPTLRKHREQLLIEVGQKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNT 995
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE+ H + ++ +VS + EF+ I VR+EE EL+ L+ C + GG N +
Sbjct: 996 IETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVENSY 1055
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1056 GKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSK 1115
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1116 VIDKRLWGWASPLRQFSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVK 1174
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L I P+F+W D HG + WWI V+D +DHIY
Sbjct: 1175 QCVHQIPSVTMEASIQPITRTVLRVSLNIYPDFSWNDQVHGTVGEPWWIWVEDPTNDHIY 1234
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1235 HSEYFLALKKQVINKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1294
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLPVTALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1295 ERHPPHTELLDLQPLPVTALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1354
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1355 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKIRIEEKLGKKVIELTGDVTP 1414
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +R+YV++V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1415 DMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNILIIDEIHLLGEERGPVLEVIVSRT 1474
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1475 NFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQH 1534
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKPA+ TH P +P L+ + R + +T L+LI F A++E P+Q+L M E
Sbjct: 1535 YCPRMASMNKPAFQESHTHCPDRPCLL-LPERMLSSMTKLELIAFLATEEDPKQWLNMDE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
++++ +++ V D NL+ TL FGIG+HHAGL+++DR VEELF N K+QVL+ TSTLAWGV
Sbjct: 1594 QEMENIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGV 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1714 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLG 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS L+ + +LE S C+++ ED ++EP G IAS YYL + TV MF
Sbjct: 1774 DVSQDAINKFLSHLIGQSLVELELSHCIEVGEDNRSIEPLTCGRIASYYYLKHKTVKMFK 1833
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ S E L ILS A EY +LPVRHNED+ N L++ + ++ + D PH KA+L
Sbjct: 1834 DRLKPECSTEELLSILSDAEEYTDLPVRHNEDHTNNELAKCLPIELNPHSFDSPHTKAHL 1893
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR LP DY TD K+VLDQ++R+ QAM+D+ A+ GWL +++ HL+QMV+QG
Sbjct: 1894 LLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTTLNITHLIQMVIQG 1953
Query: 1314 LWFEQDSALWMFP 1326
W + DS+L P
Sbjct: 1954 RWLK-DSSLLTIP 1965
Score = 987 (352.5 bits), Expect = 7.0e-105, Sum P(3) = 7.0e-105
Identities = 255/795 (32%), Positives = 413/795 (51%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
KP+ + L A N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH
Sbjct: 457 KPVYIQDLDEVGQLAFKGMKRLNRIQSIVFDTAYNTNENMLICAPTGAGKTNIAMLTVLH 516
Query: 728 LFNT--------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA 779
+++ K+VY+AP+KA+ E N + RL LG + E+TGD
Sbjct: 517 EIRQHFHQGVLKKNEFKIVYVAPMKALAAEMTNYFSKRL-EPLGIVVKELTGDMQLSKSE 575
Query: 780 LLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRY 837
+L ++++TPEKWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R
Sbjct: 576 ILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQ 635
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFY 896
+ S T+ +R +GLS L N D+A +L V IGLF F RPVPL G
Sbjct: 636 VES-TQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANK 694
Query: 897 CPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
++N+M++ Y ++ V++FV +R T TA+ LI+ A + FL
Sbjct: 695 MQQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPTQG 754
Query: 956 EDLQMVLSQVT---DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ L QV ++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLA
Sbjct: 755 PEYGHALKQVQKSRNKQVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLA 814
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAH VIIKGT+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K
Sbjct: 815 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 874
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
S Y L + P+ES + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP Y
Sbjct: 875 SHYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAY 934
Query: 1133 GLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYV 1187
G+ + L + +L+ + L+ + ++ E T T LG AS YY+ Y
Sbjct: 935 GISHKAYQMDPTLRKHREQLLIEVGQKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYN 994
Query: 1188 TVSMFGSNIGPD-TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDD 1246
T+ F T ++F I+S A E+D++ VR E +AL +++
Sbjct: 995 TIETFNELFDAHKTEGDIFA-IVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVEN 1053
Query: 1247 PHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHL 1306
+ K N+L Q + SR ++ ++D V + RI++A+ +I W + + ++L
Sbjct: 1054 SYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNL 1113
Query: 1307 LQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVS- 1365
+++ + LW S L F + +L L + + TV +L D+ K+ + ++ + +
Sbjct: 1114 SKVIDKRLW-GWASPLRQFSVLPPHILTRLEEKNL-TVDKLKDMRKDEIGHILHHVNIGL 1171
Query: 1366 RLHQDLQRFPRIQVKLRLQ--RRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDE 1423
++ Q + + P + ++ +Q R + ++LNI D SW + E
Sbjct: 1172 KVKQCVHQIPSVTMEASIQPITRTV---LRVSLNIYPDF--SWNDQVHGTV-------GE 1219
Query: 1424 AWWLVLGNTNTSELY 1438
WW+ + + +Y
Sbjct: 1220 PWWIWVEDPTNDHIY 1234
Score = 149 (57.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 1407 KNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQG-- 1464
K+ S A RFPK+KDE W+L+LG + EL A+KR+ F + TH E T +
Sbjct: 2097 KHESHAVTPRFPKLKDEGWFLILGEVDKRELVAVKRVGF---VRTHHEASISFFTPEAPG 2153
Query: 1465 ---MKLVVVSDCYLGFEQEHSI 1483
L ++SDCYLG +Q++ I
Sbjct: 2154 RYIFTLYLMSDCYLGLDQQYDI 2175
Score = 38 (18.4 bits), Expect = 7.0e-105, Sum P(3) = 7.0e-105
Identities = 8/20 (40%), Positives = 8/20 (40%)
Query: 332 FDEKSGNFYCTELGRIASHF 351
F S C RI SHF
Sbjct: 122 FPSSSATSACNATSRIISHF 141
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 3977 (1405.0 bits), Expect = 0., P = 0.
Identities = 750/1292 (58%), Positives = 958/1292 (74%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++G+ N
Sbjct: 635 VESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKV 694
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F
Sbjct: 695 QQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPSQGS 754
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ +K V KSRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAW
Sbjct: 755 EYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW 814
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+IKGTQ+Y K G + DLG+LD IFGRAGRPQFDR GEGIIIT+HDKL+
Sbjct: 815 GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKLS 874
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT Q PIESQF+ SL DNLNAE+ALGTVTNV+EA W+ YTYL +RM+ NPL YG
Sbjct: 875 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYG 934
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I DP+L+ + LV + R LDKA+M+RF+E++G F T+LGR ASH+YI+Y++
Sbjct: 935 ISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNT 994
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ET+NE H +S++ +VS + EF+ I VR+EE EL+ L+ C + GG N +
Sbjct: 995 IETFNEFFDAHKTESDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELAAPGGVENSY 1054
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GKI+IL+Q YISRG +D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K
Sbjct: 1055 GKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSK 1114
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF LP IL +LEE+ +D+L++M + +IG ++ + G VK
Sbjct: 1115 VIDKRLWGWASPLRQFSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVK 1173
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIY 596
Q + PS+ + A++ PITRTVL++ L+I P+FTW D HG + WWI V+D +DHIY
Sbjct: 1174 QCVHQIPSVTMEASIQPITRTVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIY 1233
Query: 597 HSELF-TLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSE F L K++ E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP
Sbjct: 1234 HSEYFLVLKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILP 1293
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ HTELLDL+PLP+TALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGS
Sbjct: 1294 ERHPPHTELLDLQPLPITALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGS 1353
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKT++AELA+ +FN K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TP
Sbjct: 1354 GKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKVRIEEKLGKKVIELTGDVTP 1413
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D+ ++ AD+I++TPEKWDG+SR+W +RNYVK+V ++I+DEIHLLG ERGP+LEVIVSR
Sbjct: 1414 DMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTILIIDEIHLLGEERGPVLEVIVSRT 1473
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+ISS TE+ VR +GLSTALANA DLADWL + ++GLFNF+PSVRPVPLEVHIQG+PG+
Sbjct: 1474 NFISSHTEKPVRIVGLSTALANARDLADWLNIHQMGLFNFRPSVRPVPLEVHIQGFPGQH 1533
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
YCPRM SMNKP + AI +HSP KPVLIFVSSRRQTRLTAL+LI F A++E P+Q+L M E
Sbjct: 1534 YCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+++ ++ + D NL+ TL FGIG+HHAGL+++DR VEELF N K+QVL+ TSTLAWGV
Sbjct: 1594 REMENIIGTLRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGV 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N PAHLVIIKGTEYYDGKT+RYVDFPITD+LQMMGRAGRPQ+D GKAVILVH+ KK FY
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFY 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEPFPVESSL L DH NAEI GTI K+DA+ Y++WTY FRRL +NP+YY L
Sbjct: 1714 KKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLS 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLSYVTVSMFG 1193
D + ++ +LS LV+ + +LE S C+++ ED ++EP G IAS YYL + TV MF
Sbjct: 1774 DVSHDSVNKFLSSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFK 1833
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ P+ E L ILS A EY +LPVRHNED+ N L++ + + + D PH KA+L
Sbjct: 1834 ERLKPECGTEELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHL 1893
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQ 1285
L QAH SR LP DY TD K+VLDQ++R+ Q
Sbjct: 1894 LLQAHLSRTMLPCPDYDTDTKTVLDQALRVCQ 1925
Score = 909 (325.0 bits), Expect = 1.0e-85, Sum P(2) = 1.0e-85
Identities = 221/667 (33%), Positives = 360/667 (53%)
Query: 732 QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPE 791
+++ K+VY+AP+KA+ E N + RL LG + E+TGD +L ++++TPE
Sbjct: 528 KNEFKIVYVAPMKALAAEMTNYFSKRL-EPLGIVVKELTGDMQLSKNEILRTQMLVTTPE 586
Query: 792 KWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFI 849
KWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R + S T+ +R +
Sbjct: 587 KWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVES-TQSMIRIL 645
Query: 850 GLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAY 908
GLS L N D+A +L V IGLF F RPVPL G ++N+M++ Y
Sbjct: 646 GLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCY 705
Query: 909 AAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT- 966
++ V++FV +R T TA+ LI+ A + FL + QV
Sbjct: 706 ESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPSQGSEYGHAEKQVQK 765
Query: 967 --DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII 1024
++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLAWGVNLPAH VII
Sbjct: 766 SRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVII 825
Query: 1025 KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
KGT+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K S Y L + P
Sbjct: 826 KGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKLSHYLTLLTQQNP 885
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAE---G 1141
+ES + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP YG+ +
Sbjct: 886 IESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQVDPT 945
Query: 1142 LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPD 1199
L+ + +LV L+ + ++ E T T LG AS YY+ Y T+ F
Sbjct: 946 LAKHREQLVIEVGRKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNEFFDAH 1005
Query: 1200 -TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAH 1258
T ++F I+S A E+D++ VR E +AL +++ + K N+L Q +
Sbjct: 1006 KTESDIFA-IVSKAEEFDQIKVREEEIEELDALLNNFCELAAPGGVENSYGKINILLQTY 1064
Query: 1259 FSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQ 1318
SR ++ ++D V + RI++A+ +I W + + ++L +++ + LW
Sbjct: 1065 ISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLW-GW 1123
Query: 1319 DSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVS-RLHQDLQRFPRI 1377
S L F + +L L + + TV +L D+ K+ + ++ + + ++ Q + + P +
Sbjct: 1124 ASPLRQFSVLPPHILTRLEEKNL-TVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSV 1182
Query: 1378 QVKLRLQ 1384
++ +Q
Sbjct: 1183 TMEASIQ 1189
Score = 811 (290.5 bits), Expect = 7.1e-75, Sum P(2) = 7.1e-75
Identities = 193/520 (37%), Positives = 290/520 (55%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
KP+ + L A N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH
Sbjct: 456 KPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLH 515
Query: 728 LFNT--------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA 779
+++ K+VY+AP+KA+ E N + RL LG + E+TGD
Sbjct: 516 EIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRL-EPLGIVVKELTGDMQLSKNE 574
Query: 780 LLSADIIISTPEKWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRY 837
+L ++++TPEKWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R
Sbjct: 575 ILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQ 634
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFY 896
+ S T+ +R +GLS L N D+A +L V IGLF F RPVPL G
Sbjct: 635 VES-TQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANK 693
Query: 897 CPRMNSMNKPAYAAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
++N+M++ Y ++ V++FV +R T TA+ LI+ A + FL
Sbjct: 694 VQQLNNMDEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPSQG 753
Query: 956 EDLQMVLSQVT---DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ QV ++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLA
Sbjct: 754 SEYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLA 813
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAH VIIKGT+ Y K +VD I D++Q+ GRAGRPQ+D+ G+ +I+ K
Sbjct: 814 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKL 873
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
S Y L + P+ES + L D+ NAEI GT+ + E+AV ++S+TYL+ R+ NP Y
Sbjct: 874 SHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVY 933
Query: 1133 GLEDTEAE---GLSSYLSRLVQNTFEDLEDSGCVKMTEDT 1169
G+ + L+ + +LV L+ + ++ E T
Sbjct: 934 GISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRFEERT 973
Score = 38 (18.4 bits), Expect = 1.0e-85, Sum P(2) = 1.0e-85
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 534 RLVKQYLGYFPSIQLSATVSPITR 557
+ +KQ G FPS +A + R
Sbjct: 113 KAIKQMFGPFPSSSATAACNATNR 136
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 3831 (1353.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 750/1431 (52%), Positives = 1017/1431 (71%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPN-- 58
VE+TQ MIRIVGLSATLPNY +VA+F+R P G FFDSSYRP+PL Q +IG+ +
Sbjct: 641 VETTQEMIRIVGLSATLPNYKDVARFIRA-PASGTHFFDSSYRPVPLTQNFIGVKDNQGI 699
Query: 59 FAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDT 118
+N + +++CY+++ SL++GHQ M+FVHSRKDTVK+A+ L D+A+ E F+N+
Sbjct: 700 MVMKNNM-NQLCYERLEKSLKEGHQVMIFVHSRKDTVKSAEILSDMAK--EKHFRFSNE- 755
Query: 119 HPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
P KK+ K ++K++ LF + VHHAG+LRSDR + E+ F+ G +KVLVCTATL
Sbjct: 756 EPSFGA-KKEFEKVKSKEIRSLFQHGISVHHAGLLRSDRNVVEKYFANGTIKVLVCTATL 814
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPAHTV+IKGTQ+Y+ K GG+ DLG+ D IFGRAGRPQFD SGEG ++TS DK
Sbjct: 815 AWGVNLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAGRPQFDTSGEGFLLTSKDK 874
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
L +YL L++S +PIES+FI++L+D+LNAE+ LGTV+NV EA WL YTYL IRM NPL
Sbjct: 875 LDHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLV 934
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
YGI + DP L +R ++ AA+ L++ KM RFDE+S N TELGRIASH+YI++
Sbjct: 935 YGIPSSQRSKDPQLEEFKREIIIRAAKKLEQCKMTRFDEQSENLGMTELGRIASHYYIKH 994
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
S+ET+NEML + +V+ ++S+SSEFENI +R+EE EL+ L + C E+ +
Sbjct: 995 PSIETFNEMLNDQLGQDQVLNILSNSSEFENITLREEESTELDKLAENQCYYELT--VLD 1052
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
H K+ L+Q + SR ID FSLVSD+ Y + +RI+R LFE L++GWC +S +L+
Sbjct: 1053 SHSKVKCLLQAFFSRANIDGFSLVSDSNYTVQNSSRILRGLFEISLKKGWCTVSKTILDL 1112
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
CK VD Q+W + PLRQ K L + +RK+EER +R+ +ME ++ ++ +
Sbjct: 1113 CKMVDHQLWHFESPLRQA-KVLSLDTIRKIEERDWTPERICDMEIGELSFVLGNQLIAKT 1171
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
++ FP + V PIT +++I + + P F+W D HG +Q +WI VQD+ES +I
Sbjct: 1172 TRKIAQQFPQLDFEIQVQPITANIIRINMTLIPMFSWNDKMHGDSQPFWIWVQDNESQYI 1231
Query: 596 YHSELFTLTKRMARGETQKLSFT--VPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLA 653
+HSE F LTK++ +T+ ++ T +P+ P P Q+++ +SD WL +E ISF +L
Sbjct: 1232 FHSEYFMLTKKIYN-QTEPITLTCIIPLPNPMPSQFFLHYISDRWLGSEGIREISFRHLV 1290
Query: 654 LPQA-RTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAP 712
LPQ R +TELLDL+PLP AL N +E+L+ FSHFNPIQTQ+FH LY+T+NNVLLG+P
Sbjct: 1291 LPQQDRVVNTELLDLQPLPKEALKNKDFESLFKFSHFNPIQTQVFHTLYYTNNNVLLGSP 1350
Query: 713 TGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
TGSGKTI AELAM +F + MKVVYIAPLKA+VRERMNDWK + +LGK++VE+TGD
Sbjct: 1351 TGSGKTICAELAMFKVFRDEPHMKVVYIAPLKALVRERMNDWKVKFQEKLGKKLVELTGD 1410
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
YTP+++AL +ADI+ +TPEKWDGISRNW +R+YV V L+I+DEIHL+G RGPILEVIV
Sbjct: 1411 YTPNMIALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLIIDEIHLIGELRGPILEVIV 1470
Query: 833 SRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYP 892
SRM+ IS QT +R +GLSTA+ANA DL++W+G+ +GLFNF+PS RPVP+EVHIQG+
Sbjct: 1471 SRMKLISKQTGVNIRVVGLSTAMANAIDLSEWMGIDRVGLFNFRPSCRPVPIEVHIQGFQ 1530
Query: 893 GKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
GK YCPRM +MNKP++AAI T+SP KPVLIFVSSRRQTRLTALDLI + D P Q++
Sbjct: 1531 GKNYCPRMQTMNKPSFAAIATYSPKKPVLIFVSSRRQTRLTALDLISYLVVDNDPLQWI- 1589
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
D++ L++V DQ+LR TL FGIG+HHAGLND DR++VE LF NKIQ+L+ TSTLA
Sbjct: 1590 QKGFDIEPTLARVKDQHLRHTLSFGIGMHHAGLNDGDRTIVESLFGENKIQILISTSTLA 1649
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAHLVIIKGTEY+DGKTKRYVDFP+TD+LQM+GRAGRPQ+D+ GKA+++VHEPKK
Sbjct: 1650 WGVNLPAHLVIIKGTEYFDGKTKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHEPKK 1709
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
FYKKFLY+PFPVES L+D LHDH NAEIVSGTI K+ A++YL T+ FRRL ++P+YY
Sbjct: 1710 QFYKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYY 1769
Query: 1133 GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE-DTVEPTMLGTIASQYYLSYVTVSM 1191
GLED E ++ YLS L+ +T DLE S C+++ E D + P +G IAS YYL+Y TV
Sbjct: 1770 GLEDNSVEAVNQYLSDLLDSTLADLEQSSCIEINEYDEIIPMSMGKIASFYYLNYKTVQN 1829
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKA 1251
F NI D+ ++ L +LS A+EY E PVRHNE+ N+ L++ + + N +D H K
Sbjct: 1830 FSDNIKRDSDIKTLLRVLSDAAEYSEFPVRHNEEILNQELNENLPIKIGN--YEDSHTKV 1887
Query: 1252 NLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVM 1311
+LL QAHF R LPI+D+ TD KS LDQ IRI+QAMID+ G+ +++I + LLQM++
Sbjct: 1888 HLLLQAHFQRCPLPITDFTTDTKSALDQGIRILQAMIDVSFEYGYFATAIQVIRLLQMLV 1947
Query: 1312 QGLWFEQDSALWMFPCMNNDLLGTLRAR-----G--ISTVQQLLDIPKENLQTVIGNFPV 1364
QG W + DS+L P +N D L + G IS + +L IP++ + + N +
Sbjct: 1948 QGRW-DYDSSLMTLPHINKDFADFLSSNLILSNGEQISNLSDMLKIPRDKIHLSLTNIGL 2006
Query: 1365 S--RLHQDLQ---RFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTS 1410
S ++ + L P+++++ + + + N+ N + N+ KN +
Sbjct: 2007 SDSQIKETLNVIDHLPKVKIEYFINTNN-NSNNNDDNNNENNNNNNKKNNN 2056
Score = 1019 (363.8 bits), Expect = 4.0e-102, Sum P(3) = 4.0e-102
Identities = 256/757 (33%), Positives = 402/757 (53%)
Query: 675 LGNNIYE----ALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN 730
+G +I E A + N IQ+++F Y ++ N+L+ APTG+GKT A L +LH
Sbjct: 465 IGESIAEISRAAFGSIKKLNRIQSRVFESAYKSNENILISAPTGAGKTNIALLTILHEIE 524
Query: 731 T---------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALL 781
+ + + K++YIAPLKA+ E + + + L LG E+TGD L
Sbjct: 525 SNINPYGYLDKDNFKIIYIAPLKALASEMVEKFSNSL-KYLGIVSKELTGDMQLTQKELK 583
Query: 782 SADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISS 840
II++TPEKWD I+R K V L+I+DEIHLL ERGP+LE IV+R +R + +
Sbjct: 584 ETQIIVTTPEKWDVITRKSSDVALTKLVRLIIIDEIHLLHEERGPVLECIVARTLRQVET 643
Query: 841 QTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM 900
T+ +R +GLS L N D+A ++ G F S RPVPL + G M
Sbjct: 644 -TQEMIRIVGLSATLPNYKDVARFIRAPASGTHFFDSSYRPVPLTQNFIGVKDNQGIMVM 702
Query: 901 -NSMNKPAYAAI-CTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDL 958
N+MN+ Y + + V+IFV SR+ T +A +++ A ++ R P
Sbjct: 703 KNNMNQLCYERLEKSLKEGHQVMIFVHSRKDTVKSA-EILSDMAKEKHFRFSNEEPSFGA 761
Query: 959 QMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP 1018
+ +V + +R Q GI +HHAGL DR++VE+ FAN I+VLVCT+TLAWGVNLP
Sbjct: 762 KKEFEKVKSKEIRSLFQHGISVHHAGLLRSDRNVVEKYFANGTIKVLVCTATLAWGVNLP 821
Query: 1019 AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF 1078
AH VIIKGT+ Y+ K ++D I+D++Q+ GRAGRPQ+D G+ +L + K Y
Sbjct: 822 AHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAGRPQFDTSGEGFLLTSKDKLDHYLSL 881
Query: 1079 LYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTE 1138
+ P+ES L DH NAEIV GT+ + +AV++LS+TYLF R+ NP YG+ ++
Sbjct: 882 MSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLVYGIPSSQ 941
Query: 1139 AEG---LSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTVSMFG 1193
L + ++ + LE + E + + T LG IAS YY+ + ++ F
Sbjct: 942 RSKDPQLEEFKREIIIRAAKKLEQCKMTRFDEQSENLGMTELGRIASHYYIKHPSIETFN 1001
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ + L+ILS +SE++ + +R E + L++ + + LD H K
Sbjct: 1002 EMLNDQLGQDQVLNILSNSSEFENITLREEESTELDKLAENQCY-YELTVLDS-HSKVKC 1059
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QA FSR ++ V+D + S RI++ + +I GW + S T + L +MV
Sbjct: 1060 LLQAFFSRANIDGFSLVSDSNYTVQNSSRILRGLFEISLKKGWCTVSKTILDLCKMVDHQ 1119
Query: 1314 LW-FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDL- 1371
LW FE S L ++ D + + R T +++ D+ L V+GN +++ + +
Sbjct: 1120 LWHFE--SPLRQAKVLSLDTIRKIEERDW-TPERICDMEIGELSFVLGNQLIAKTTRKIA 1176
Query: 1372 QRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKN 1408
Q+FP++ ++++Q I N + +N+ + M SW +
Sbjct: 1177 QQFPQLDFEIQVQ--PITA-NIIRINMTLIPMFSWND 1210
Score = 84 (34.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 1396 LNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRIS--FSDRLNTHM 1453
+ I++ + N + AFA + K KDE W +VL + ++ KR+ S+ + +
Sbjct: 2074 IKIKVTRENKKFSNGHAFAPLYSKDKDEGWIMVLTDEK-EQMIGFKRVPQMISNSVTANF 2132
Query: 1454 ELPSG-ITTFQGMKLVVVSDCYLGFEQEHSIE 1484
++P + + + SD Y+G + H+ +
Sbjct: 2133 KIPKAPFQSSTNYNVKLYSDTYMGLDYFHTFQ 2164
Score = 40 (19.1 bits), Expect = 4.0e-102, Sum P(3) = 4.0e-102
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 493 FDKELPA---EILRKLEERGADLDRLQE 517
FD+++ A EI++K E+ + DR+ E
Sbjct: 29 FDEQVVARNKEIMKKRNEKKKEKDRIIE 56
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 3791 (1339.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 724/1425 (50%), Positives = 1000/1425 (70%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VES+Q MIRIVGLSATLPNY++VA FLRVNP GLF+FDS +RP+PL ++GI
Sbjct: 645 VESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLFYFDSRFRPVPLDTNFVGIKSVKQL 704
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+ + + CY+K V+ +++GHQ MVFVH+R TV+TA + +LA++ +F
Sbjct: 705 QQIADMDQCCYQKCVEMVQEGHQIMVFVHARNATVRTANVIRELAQQNNTSALFLPKDSA 764
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
L + + +SRNK L+ELF + +HHAGMLR+DR + E+ F EG + VLVCTATLAW
Sbjct: 765 AHGLATRSIQRSRNKQLVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAW 824
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAH V+I+GT +YD K G + DLG+LD IFGRAGRPQFD+SG G IITS+DKL
Sbjct: 825 GVNLPAHAVIIRGTDIYDAKHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKLN 884
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LLT+Q PIES F++ L DNLNAE+ LGT+TNV EA WL YTYL +RM++NP YG
Sbjct: 885 HYLSLLTNQFPIESNFVNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYG 944
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I + E+ DP+L ++RAL+ AA +LDKA+MMRF++++ + T+LGR AS+FYI+Y +
Sbjct: 945 IEYSELEKDPTLEARRRALIMSAAMSLDKARMMRFNQRTMDMNITDLGRTASYFYIKYDT 1004
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
VET+NE+++ M +E++ M+S + EF+ + VRD+E EL+ L C ++ GG N H
Sbjct: 1005 VETFNELMKPFMTQAEILAMISQAQEFQQLKVRDDEMEELDELKNAYCKIKPYGGSENVH 1064
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
GK++ILIQ Y+S G++ +FSL SD +YI+ ++ RI RALF LR+ +S ML+ CK
Sbjct: 1065 GKVNILIQTYLSNGYVKSFSLSSDMSYITTNIGRISRALFSIVLRQNNAVLSGNMLQLCK 1124
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+R+ W L+QF + AE + KLE RG + RL++ME +++ +R LV
Sbjct: 1125 MFERRQWDFDCHLKQFPT-INAETIDKLERRGLSVYRLRDMEHRELKEWLRSNTYADLVI 1183
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHG-AAQRWWIIVQDSESDHIY 596
+ P +++ A++ PITRTVL+I + I P FTW D HG Q +W+ ++D ES++IY
Sbjct: 1184 RSAHELPLLEVEASLQPITRTVLRIKVDIWPSFTWNDRVHGKTCQSFWLWIEDPESNYIY 1243
Query: 597 HSELFTLTKRMAR-GETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
HSELF +T+++ G++Q+L T+P+ EP PPQYYIR SD+WL + +SF +L LP
Sbjct: 1244 HSELFQVTRKLVMSGQSQQLVMTIPLKEPLPPQYYIRVSSDNWLGSTTCIPLSFQHLVLP 1303
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ TELL L+PLPV+ L N +YE+LY F+HFNPIQTQIFH LYHTDNNVLLGAPTGS
Sbjct: 1304 EHHPPLTELLPLRPLPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGS 1363
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLV-SQLGKEMVEMTGDYT 774
GKTI AE+A+ N KVVYIAPLKA+V+ER+ DW+ R S LG ++VE+TGD T
Sbjct: 1364 GKTIVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTGDVT 1423
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR 834
PD+ A+ + +I++TPEKWDGISR+W +R YV+ V L+++DEIHLLG +RGP++EVIVSR
Sbjct: 1424 PDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVIDEIHLLGEDRGPVIEVIVSR 1483
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
+ISS T RA+R +GLSTALANA DLA+WLG+ ++GL+NFKPSVRPVPL+VHI G+PGK
Sbjct: 1484 TNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMGLYNFKPSVRPVPLQVHINGFPGK 1543
Query: 895 FYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMP 954
YCPRM +MN+P + AI T+SP +P ++FVSSRRQTRLTALDLI F A + P+QFL +P
Sbjct: 1544 HYCPRMATMNRPTFQAIRTYSPCEPTIVFVSSRRQTRLTALDLITFVAGESNPKQFLHIP 1603
Query: 955 EEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWG 1014
E++++++L + +QNL+ L FGIGLHHAGL ++DR VEELF N KIQ+LV T+TLAWG
Sbjct: 1604 EDEIELILQNIREQNLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQILVATATLAWG 1663
Query: 1015 VNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSF 1074
VNLPAHLV+IKGTEY+DGK K+YVD PITD+LQMMGRAGRPQ+D G AV+LVH+ KK+F
Sbjct: 1664 VNLPAHLVVIKGTEYFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKNF 1723
Query: 1075 YKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGL 1134
YKKFLY+PFPVESSL L +H NAEIV+GT+ K+ A+ YL+WTY FRRL NP+YY L
Sbjct: 1724 YKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQL 1783
Query: 1135 EDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGS 1194
+D E E +++++S LV+ +L + C+ + + PT LG I+S YYLSY T+ F
Sbjct: 1784 QDIEPENVNNFMSNLVERVVYELSAAACLVERDGCLIPTFLGRISSYYYLSYRTMKHFLE 1843
Query: 1195 NIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
++ P + + L ++ + E+D+LPVRHNED HNE +++ RF ++ D + K LL
Sbjct: 1844 DLQPGMNTKKVLLAIADSYEFDQLPVRHNEDKHNEEMAEVSRFRPPSSSWDSSYTKTFLL 1903
Query: 1255 FQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGL 1314
QAHF+R LP SDY+TD KS LD + R++QAM+D A GWLS+++ L+Q V+Q
Sbjct: 1904 LQAHFARQSLPNSDYLTDTKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQAR 1963
Query: 1315 WFEQDSALWMFPCMNNDLLGTLRA-----RGISTVQQLLDIPKEN-------LQTVIGNF 1362
WF+ L + P +N D L T+ L ++ K+ L+
Sbjct: 1964 WFDGSEFLTL-PGVNEDNLDAFLNIPHDDYDYLTLPVLKELCKQEYEVLAKPLRDAFEEH 2022
Query: 1363 PVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLT-LNIRMDKMNSW 1406
+ ++++ +Q P I +++ ++ R ++ E + L++ D W
Sbjct: 2023 EIEKMYKVIQDLPEIAIQIFVEGRHMENEYAKRPLSLSDDTRGEW 2067
Score = 937 (334.9 bits), Expect = 8.4e-97, Sum P(2) = 8.4e-97
Identities = 240/728 (32%), Positives = 383/728 (52%)
Query: 682 ALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN--------TQS 733
A N N IQ+ +F + YH++ N+L+ APTG+GKT A L+++H +
Sbjct: 480 AFANCKELNRIQSVVFPVAYHSNENMLVCAPTGAGKTNVAMLSIVHTIRCHLEQGVINRD 539
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+ K+VYIAP+KA+ E ++++ RL S L + E+TGD + + I+++TPEKW
Sbjct: 540 EFKIVYIAPMKALAAEMVDNFSKRLKS-LQIAVRELTGDIQLTKAEMAATQILVTTPEKW 598
Query: 794 DGISRNWHSR-NYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLS 852
D ++R + V L+I+DE+HLL ERGP++E +V+R + ++ +R +GLS
Sbjct: 599 DVVTRKGSGDVALISLVELLIIDEVHLLHGERGPVVEALVARTLRLVESSQSMIRIVGLS 658
Query: 853 TALANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAI 911
L N D+A +L V + GLF F RPVPL+ + G ++ M++ Y
Sbjct: 659 ATLPNYIDVAHFLRVNPMKGLFYFDSRFRPVPLDTNFVGIKSVKQLQQIADMDQCCYQK- 717
Query: 912 CTHSPTK--PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN 969
C + +++FV +R T TA + + A + T FL P++ L+ + Q
Sbjct: 718 CVEMVQEGHQIMVFVHARNATVRTANVIRELAQQNNTSALFL--PKDSAAHGLATRSIQR 775
Query: 970 LR--QTLQF---GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII 1024
R Q ++ G+ +HHAG+ DR +VE+ F I VLVCT+TLAWGVNLPAH VII
Sbjct: 776 SRNKQLVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVII 835
Query: 1025 KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
+GT+ YD K +VD I D+LQ+ GRAGRPQ+D+ G I+ K + Y L FP
Sbjct: 836 RGTDIYDAKHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKLNHYLSLLTNQFP 895
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEG--- 1141
+ES+ + L D+ NAEI GTI + ++A+ +LS+TYLF R+ INP YG+E +E E
Sbjct: 896 IESNFVNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYGIEYSELEKDPT 955
Query: 1142 LSSYLSRLVQNTFEDLEDSGCVKMTEDTVEP--TMLGTIASQYYLSYVTVSMFGSNIGPD 1199
L + L+ + L+ + ++ + T++ T LG AS +Y+ Y TV F + P
Sbjct: 956 LEARRRALIMSAAMSLDKARMMRFNQRTMDMNITDLGRTASYFYIKYDTVETFNELMKPF 1015
Query: 1200 TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHF 1259
+ L ++S A E+ +L VR +E + L ++ H K N+L Q +
Sbjct: 1016 MTQAEILAMISQAQEFQQLKVRDDEMEELDELKNAYCKIKPYGGSENVHGKVNILIQTYL 1075
Query: 1260 SRLDLPISDYVTDLKSVLDQSIRIIQAMIDICA--NSGWLSSSITCMHLLQMVMQGLWFE 1317
S + +D+ + RI +A+ I N+ LS ++ + L +M + W +
Sbjct: 1076 SNGYVKSFSLSSDMSYITTNIGRISRALFSIVLRQNNAVLSGNM--LQLCKMFERRQW-D 1132
Query: 1318 QDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVI-GNFPVSRLHQDLQRFPR 1376
D L FP +N + + L RG+S V +L D+ L+ + N + + P
Sbjct: 1133 FDCHLKQFPTINAETIDKLERRGLS-VYRLRDMEHRELKEWLRSNTYADLVIRSAHELPL 1191
Query: 1377 IQVKLRLQ 1384
++V+ LQ
Sbjct: 1192 LEVEASLQ 1199
Score = 116 (45.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 1416 RFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQG---MKLVVVSD 1472
++PK K+EAW+L LG+ EL A+KR+S + T+ + T G + L ++SD
Sbjct: 2104 KYPKPKNEAWFLTLGSQANDELLAMKRVSIRGQRCTN-RISFQATPRLGRLQLTLYLMSD 2162
Query: 1473 CYLGFEQEHSIE 1484
C +GF+Q++ ++
Sbjct: 2163 CLMGFDQQYDLQ 2174
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 3500 (1237.1 bits), Expect = 0., P = 0.
Identities = 714/1512 (47%), Positives = 1001/1512 (66%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGIS-EPNF 59
VE++Q+MIRIVGLSATLPNYL+VA FL VN GLF+F S++RP P+ Q +IG P
Sbjct: 445 VETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLFYFSSAFRPCPIEQHFIGAKGSPKI 504
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
N + E C+ KV+ +++GHQ M+FVHSRK+T+ +A+KL + + ++ +N H
Sbjct: 505 VNSN--IDEACFDKVLKLIQEGHQVMIFVHSRKETINSAKKLREQFFHEGEADLLDNSQH 562
Query: 120 PQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLA 179
+ SL ++DV KS+NK+L ELF ++G+H+AGMLRSDR LTERLFS G+LK+L CTATLA
Sbjct: 563 EKYSLAQRDVSKSKNKELKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKILCCTATLA 622
Query: 180 WGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKL 236
WGVNLPA+ V+IKGTQLYDP+ G + DLG+LD IFGRAGRPQF+ S IIT+HDKL
Sbjct: 623 WGVNLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHDKL 682
Query: 237 AYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAY 296
++Y+ ++T Q PIES+F L DNLNAEV+LGTVTN+ EA +WLGYTYL IRM+ NPL Y
Sbjct: 683 SHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVY 742
Query: 297 GIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYS 356
GI +DE++ DP L K+R LV+ AA L +M+ +++K+G +LGRIAS++YI Y
Sbjct: 743 GIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQ 802
Query: 357 SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNK 416
+V T N +L+ M+++++I ++S SEF I R+ E ELE+L++ P +++ SN
Sbjct: 803 TVSTLNNLLKSKMSEADIIALLSQCSEFSQIKSRENEHRELESLMENSSPCQLRDSISNT 862
Query: 417 HGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYC 476
GK+++++Q YISR ++ F+L SD Y++ + RI RALFE + R W + +L
Sbjct: 863 SGKVNVILQSYISRAHVEDFTLTSDTNYVAQNAGRITRALFEIAMSRTWAS-AFTILSLN 921
Query: 477 KAVDRQIWPHQHPLRQFDKELPAEILRKLEER-GA-DLDRLQEMEEKDIGALIRYTPGGR 534
K++DR+ W +HPL QFD LP ++ K+E + G+ L+ L +M ++G LI G
Sbjct: 922 KSIDRRQWSFEHPLLQFD--LPHDLAVKVENQCGSLSLEELSDMSTGELGDLIHNRKMGP 979
Query: 535 LVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDH 594
VK+++ P + ++ + P+T+ VL++ L ITP F W +HG +Q +WI V+DS
Sbjct: 980 TVKKFISKLPLLNINVDLLPLTKNVLRLVLNITPNFNWDMRYHGNSQMFWIFVEDSNGLE 1039
Query: 595 IYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLAL 654
I H E L KR + LSFT+P+ P P Q YI AVSD WL AE +S N+
Sbjct: 1040 ILHHEQLLLNKRNV-STSHLLSFTIPVSNPLPSQLYIIAVSDKWLGAETVTPVSLSNVVF 1098
Query: 655 PQARTSHTELLDLKPLPVTALGNNIYEALY--NFSHFNPIQTQIFHILYHTDNNVLLGAP 712
TELLDL+PLP+TAL + + E + FS FN +QTQ FH +YHTD N+ +GAP
Sbjct: 1099 HDDSNPITELLDLQPLPITALHDPVLEGICAKRFSFFNAVQTQFFHTIYHTDTNIFVGAP 1158
Query: 713 TGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
TGSGKT++AELA + KVVYIAP+KA+V+ER+ DW RLV +G M+E+TGD
Sbjct: 1159 TGSGKTMAAELATWRALHNYPKSKVVYIAPMKALVKERVKDWGHRLVEPMGISMIELTGD 1218
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
PD+ A+ +A+III+TPEKWDGI+R+W SR YV+ V L+ILDEIHLLG++RGP+LE+IV
Sbjct: 1219 TNPDVKAVTNANIIITTPEKWDGITRSWKSRKYVQDVSLIILDEIHLLGSDRGPVLEMIV 1278
Query: 833 SRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYP 892
SRM Y++SQT + VR +GLSTA+ANA DLA+WL + + GLFNF+ SVRPVPLE++I G+P
Sbjct: 1279 SRMNYVASQTNKKVRVLGLSTAVANANDLANWLNIRD-GLFNFRHSVRPVPLEIYIDGFP 1337
Query: 893 GKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
G+ YCPRM SMNKPA+ AI THSPT+PVLIFVSSRRQTRLTA DLI F ++ PR+FL
Sbjct: 1338 GRAYCPRMMSMNKPAFQAIKTHSPTQPVLIFVSSRRQTRLTAKDLIAFCGLEDNPRRFLY 1397
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
M EE+L+M++S+V D++L+ L FGI LHHAGL + DR + EELF NNK+Q+L+ TSTLA
Sbjct: 1398 MDEEELEMIVSEVEDKSLKLALPFGIALHHAGLTENDRKISEELFVNNKVQILIATSTLA 1457
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVN PAHLVI+KGTEYYD K Y D +TD+LQM+GRAGRPQ+D G A I V + KK
Sbjct: 1458 WGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQDIKK 1517
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
SFYK FL+ FPVES L L +H NAEI +GTI + A+ +L+ TY +RR+ NP YY
Sbjct: 1518 SFYKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYY 1577
Query: 1133 GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCV-KMTEDTVEPTMLGTIASQYYLSYVTVSM 1191
G + + + + +YLS+LV F +LE S C+ ++ E+T PT LG I S YYL + T+
Sbjct: 1578 GADGDDQKSIDTYLSKLVVTAFNELEKSACIYRVNEETYAPTTLGRIVSYYYLFHTTIRN 1637
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVD--NNRLDDPHV 1249
F I + ++ L +L+ ASE+D+L +RHNED N +++ ++++ N + D HV
Sbjct: 1638 FVQKITENAEFDLALQLLAEASEFDDLAIRHNEDLINIEINKSLKYSAACLNLPMVDAHV 1697
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
KA +L QAH +RL LP+ DYVTD +VLDQ IRIIQ+ ID+ A G+ + + L+Q
Sbjct: 1698 KAFILTQAHMARLKLPVDDYVTDTSTVLDQVIRIIQSYIDVSAELGYSHVCLQYISLMQC 1757
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGN----FPVS 1365
+ Q + + P +N AR + + + L ++ N F +
Sbjct: 1758 LKQAC-YPSEIYRASLPGLNAS--SEKEARDY--LNKFAGNKTDELYQMLCNDPNVFDIE 1812
Query: 1366 RLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTS-RAFALRFPKIKDEA 1424
L L +P++ +++ D L L +R ++N N FA FPK + E
Sbjct: 1813 SLVNSLISYPKMNIEVSQSSSD-----KLLLYLR--RLNQPLNPDFYIFAPLFPKPQSEG 1865
Query: 1425 WWLVLGNTNTSELYALKRISFSDRLNTH---------MELPSGITTFQGMKLVVVSDCYL 1475
+++++ ++ T EL+A++R SF+ R N M++P + +K++VV D Y
Sbjct: 1866 FFVLIIDSETQELFAIRRASFAGRRNDDSIRLSLRISMDIPPTCRN-RNVKVMVVCDGY- 1923
Query: 1476 GFEQEHSIEALV 1487
EH I ++
Sbjct: 1924 PLIYEHKIVLMI 1935
Score = 823 (294.8 bits), Expect = 1.4e-87, Sum P(2) = 1.4e-87
Identities = 234/767 (30%), Positives = 401/767 (52%)
Query: 732 QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPE 791
+ D K+VYIAP+KA+ E + RL + LG + E+TGD + I+++TPE
Sbjct: 338 RDDFKIVYIAPMKALAAEVVEKMGKRL-AWLGLKTRELTGDMQLTKTEIAETQILVTTPE 396
Query: 792 KWDGISR-NWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIG 850
KWD ++R + +KV L+I+DE+H+L ERG ++E +V+R + + +++ +R +G
Sbjct: 397 KWDVVTRKSVGDTQLAEKVRLVIIDEVHMLHDERGAVIESLVARTQRLVETSQQMIRIVG 456
Query: 851 LSTALANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRM-NS-MNKPA 907
LS L N D+AD+LGV GLF F + RP P+E H G G P++ NS +++
Sbjct: 457 LSATLPNYLDVADFLGVNRYKGLFYFSSAFRPCPIEQHFIGAKGS---PKIVNSNIDEAC 513
Query: 908 YAAICTH-SPTKPVLIFVSSRRQTRLTALDLI-QFAASDETPRQFLGMPEE-DL-QMVLS 963
+ + V+IFV SR++T +A L QF E E+ L Q +S
Sbjct: 514 FDKVLKLIQEGHQVMIFVHSRKETINSAKKLREQFFHEGEADLLDNSQHEKYSLAQRDVS 573
Query: 964 QVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVI 1023
+ ++ L++ ++ +G+H+AG+ DR L E LF+ +++L CT+TLAWGVNLPA+ V+
Sbjct: 574 KSKNKELKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKILCCTATLAWGVNLPAYAVL 633
Query: 1024 IKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF 1083
IKGT+ YD + +VD + D+LQ+ GRAGRPQ++ A I+ K S Y + +
Sbjct: 634 IKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHDKLSHYISVVTQQS 693
Query: 1084 PVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGL---EDTEAE 1140
P+ES D+L D+ NAE+ GT+ + ++AV +L +TYL+ R+ NP YG+ E E
Sbjct: 694 PIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDP 753
Query: 1141 GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGP 1198
L S LV L D+ + + + P LG IAS YY++Y TVS + +
Sbjct: 754 LLGSKRRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQTVSTLNNLLKS 813
Query: 1199 DTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAH 1258
S + +LS SE+ ++ R NE E+L + + + + K N++ Q++
Sbjct: 814 KMSEADIIALLSQCSEFSQIKSRENEHRELESLMENSSPCQLRDSISNTSGKVNVILQSY 873
Query: 1259 FSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW-FE 1317
SR + +D V + RI +A+ +I + W +S+ T + L + + + W FE
Sbjct: 874 ISRAHVEDFTLTSDTNYVAQNAGRITRALFEIAMSRTW-ASAFTILSLNKSIDRRQWSFE 932
Query: 1318 QDSALWMFPCMNNDLLGTLRAR-GISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPR 1376
+ P +DL + + G ++++L D+ L +I N ++ +++F
Sbjct: 933 HPLLQFDLP---HDLAVKVENQCGSLSLEELSDMSTGELGDLIHN---RKMGPTVKKF-- 984
Query: 1377 IQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSE 1436
I KL L ++D LT N+ +N N + + +R+ + +W+ + ++N E
Sbjct: 985 IS-KLPLLNINVD-LLPLTKNVLRLVLNITPNFN--WDMRYHG-NSQMFWIFVEDSNGLE 1039
Query: 1437 LYALKRISFSDR-LNT-HM---ELPSGITTFQGMKLVVVSDCYLGFE 1478
+ +++ + R ++T H+ +P + ++ VSD +LG E
Sbjct: 1040 ILHHEQLLLNKRNVSTSHLLSFTIPVSNPLPSQLYIIAVSDKWLGAE 1086
Score = 146 (56.5 bits), Expect = 1.4e-87, Sum P(2) = 1.4e-87
Identities = 43/166 (25%), Positives = 80/166 (48%)
Query: 649 FHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
+ + +P A+ + ++ K L ++++ + ++ N IQ+ ++ I Y T+ N+L
Sbjct: 239 YEEIIVPHAQRA-PQMQGEKLLEISSMDILCRKTFLSYQTLNRIQSLVYPIAYKTNENML 297
Query: 709 LGAPTGSGKTISAELAMLHLFNT---------QSDMKVVYIAPLKAIVRERMNDWKDRLV 759
+ APTG+GKT A LAML + +S+ V+ K + M +V
Sbjct: 298 ICAPTGAGKTDVALLAMLQTISNYVESMNLMDESEPLDVHRDDFKIVYIAPMKALAAEVV 357
Query: 760 SQLGKEMV-------EMTGDYTPDLMALLSADIIISTPEKWDGISR 798
++GK + E+TGD + I+++TPEKWD ++R
Sbjct: 358 EKMGKRLAWLGLKTRELTGDMQLTKTEIAETQILVTTPEKWDVVTR 403
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 3468 (1225.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 700/1470 (47%), Positives = 977/1470 (66%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGIS-EPNF 59
VESTQ +IRIVGLSATLPN+++VA FL+VN GLF+FD+S+RP+PL Q +IG+ +
Sbjct: 460 VESTQSLIRIVGLSATLPNFIDVADFLKVNRMQGLFYFDASFRPVPLEQHFIGVKGKAGT 519
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
E L E+ + KV + L + HQ MVFVHSR+DT++TA+ L + A L++F+ H
Sbjct: 520 KQSRENLDEVAFDKVREMLEKDHQVMVFVHSRRDTLQTAKMLHERAVDQACLDLFDPSMH 579
Query: 120 PQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLA 179
P+ +D+ + ++L +L +G+HHAGM RSDR L ERLF+EG+LKVL CTATLA
Sbjct: 580 PKYDAAIRDMKTCKARELRDLVPKGMGIHHAGMTRSDRNLMERLFAEGVLKVLCCTATLA 639
Query: 180 WGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKL 236
WGVNLPA VVIKGTQ+Y + G + DLG+LD IFGRAGRPQF+ +G G+I T+ DKL
Sbjct: 640 WGVNLPAAAVVIKGTQVYSAQEGKFVDLGILDVLQIFGRAGRPQFEDTGIGMICTTADKL 699
Query: 237 AYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAY 296
++YL +T QLPIES+F S L DNLNAE+ALGTVT++ EA W+GY+YL +RM+ NP+AY
Sbjct: 700 SHYLTAVTDQLPIESRFSSKLVDNLNAEIALGTVTSIPEAVQWIGYSYLYVRMRKNPMAY 759
Query: 297 GIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYS 356
GI W E DP L ++R L AAR L + +M+ F+E + ++GRIAS +YI ++
Sbjct: 760 GISWAEFEEDPELVQRRRTLAIQAARTLQECQMVIFNETTEELRSKDIGRIASQYYILHT 819
Query: 357 SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLC--PVEVKGGPS 414
S++ +N M+ + +++V++M++ S EF+NI RD E EL + + P +V GG
Sbjct: 820 SIQVFNTMMSPYATEADVLKMIAMSGEFDNIQSRDSEAKELTRMKDSRAAVPCDVAGGID 879
Query: 415 NKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLE 474
K +IL+Q YIS+ + F+L +D Y++ RI RA+F L R W L +L
Sbjct: 880 TPQAKTNILLQAYISKVQPEDFALGNDLNYVAQQAGRICRAIFMIALNRRWGHQCLVLLT 939
Query: 475 YCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGA-DLDRLQEMEEKDIGALIRYTPGG 533
K++++++WP QHPL QF ELP IL +L+ + + ++ +++ME +IGAL+ G
Sbjct: 940 LAKSIEKRVWPFQHPLHQF--ELPKPILNQLDAKDSLSVEAMRDMEAAEIGALVHNHGAG 997
Query: 534 RLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESD 593
+ + FP++ + A ++P+ R VL+I L ITP+F W D HG ++ ++I V +SE+
Sbjct: 998 TKLANMISNFPTVSVEAEIAPLNRDVLRIRLFITPDFRWNDRLHGTSESYYIWVDNSETS 1057
Query: 594 HIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLA 653
IYH E F L++R + +L+FT+P+ +P P Q Y+RAVSD WL AE +SF +L
Sbjct: 1058 EIYHHEFFILSRRKLYDD-HELNFTIPLSDPLPTQIYVRAVSDRWLGAETVTPVSFQHLI 1116
Query: 654 LPQARTSHTELLDLKPLPVTALGNNIYEALY--NFSHFNPIQTQIFHILYHTDNNVLLGA 711
P + +T+LL+L+PLP+ AL N I E +Y F +FNP+QTQIFH LYHT NVLLG+
Sbjct: 1117 RPDTESVYTDLLNLQPLPIGALKNPILEHVYAQRFQYFNPMQTQIFHTLYHTPANVLLGS 1176
Query: 712 PTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTG 771
PTGSGKT++AELAM F + KVVYIAP+KA+VRER+ DW RL +G ++VE+TG
Sbjct: 1177 PTGSGKTVAAELAMWWAFRERPGSKVVYIAPMKALVRERVKDWGARLAQPMGLKLVELTG 1236
Query: 772 DYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVI 831
D TPD + AD+II+TPEKWDGISR+W +R YV++V L+I+DEIHLL +RGPILE+I
Sbjct: 1237 DNTPDTRTIKDADVIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLAGDRGPILEII 1296
Query: 832 VSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGY 891
VSRM YI++ T+ +VR +G+STA ANA DL +WLGV E GLFNF+ SVRPVPLE++I G+
Sbjct: 1297 VSRMNYIAASTKNSVRLLGMSTACANATDLGNWLGVKE-GLFNFRHSVRPVPLELYIDGF 1355
Query: 892 PG-KFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQF 950
P + +CP M SMN+P + A+ HSPTKPV++FV SRRQTRLTA DLI ++ PR+F
Sbjct: 1356 PEVRGFCPLMQSMNRPTFLAVKNHSPTKPVIVFVPSRRQTRLTAKDLINMCGMEDNPRRF 1415
Query: 951 LGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTST 1010
L M E+DLQ+ L++V D L++ + FGIGLHHAGL + DR L EELF NNKIQ+LV TST
Sbjct: 1416 LNMDEDDLQLNLTRVKDDALKEAISFGIGLHHAGLVESDRQLAEELFLNNKIQILVATST 1475
Query: 1011 LAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEP 1070
LAWGVNLPAHLV++KGT++YD K + Y D +TD+LQM+GRAGRPQ+D G A I +
Sbjct: 1476 LAWGVNLPAHLVVVKGTQFYDAKIEGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFTQDS 1535
Query: 1071 KKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPA 1130
KK FYK FL+ FPVESSL L +H AEI + TI K+DA+ YL+WT+ FRRL NP+
Sbjct: 1536 KKDFYKHFLHTGFPVESSLHTVLDNHLCAEISAETIITKQDALDYLTWTFFFRRLHKNPS 1595
Query: 1131 YYGLEDTEAEGLS--------SYLSRLVQNTFEDLEDSGCVKMTED-TVEPTMLGTIASQ 1181
YYGLE E S Y+ ++ ++ ++L S CV++ + V+PT LG I S
Sbjct: 1596 YYGLEIPVEEQTSIAAQQAANDYIISMIDSSLDELATSKCVEVYPNGDVDPTPLGKIMSY 1655
Query: 1182 YYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVD- 1240
YYLS+ T+ N + L + A EYDELPVRHNED N LS+ + A D
Sbjct: 1656 YYLSHKTIRSLVKNAKAGATFADVLSWMCRAIEYDELPVRHNEDLINIELSKALPIATDL 1715
Query: 1241 --NNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLS 1298
+ + DPHVKA LL QAH SR+ LPI+DYV D SVLDQ+IRIIQA ID+ G LS
Sbjct: 1716 FGSLPMWDPHVKAFLLLQAHMSRIPLPITDYVGDQTSVLDQAIRIIQASIDVLTELGHLS 1775
Query: 1299 SSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTV 1358
S + + LLQ + W DS L + P + + L T +G T+ +L +P + L +
Sbjct: 1776 SCLEMIKLLQCIKSARW-PTDSPLAILPGLEPESLATKGNKGSVTLGKLASLPNKQLGSA 1834
Query: 1359 IGNFPVSRLHQD-LQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNT-SRAFALR 1416
I V Q+ Q+ + L ++ DI + +L++ + + N + +R +A +
Sbjct: 1835 IKELGVPASQQNKFQKAVSMLPDLSVKVEDI---TAASLSVVLRRANPLVDREARVYAPK 1891
Query: 1417 FPKIKDEAWWLVLGNTNTSELYALKRISFS 1446
+PK + E W +++G+ T ++ A+KR+ +S
Sbjct: 1892 YPKPQTEGWLVLVGDIATDDVVAVKRVGWS 1921
Score = 844 (302.2 bits), Expect = 5.6e-86, Sum P(3) = 5.6e-86
Identities = 239/767 (31%), Positives = 378/767 (49%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
D K+VY+AP+KA+ E RL + LG E TGD ++ II++TPEKW
Sbjct: 355 DFKIVYVAPMKALAAEITEKLGKRL-AWLGIRCREYTGDMHLTKTEIVQTQIIVTTPEKW 413
Query: 794 DGISRNWHS-RNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLS 852
D ++R V+KV L+I+DE+H+L ERG +LE +V+R T+ +R +GLS
Sbjct: 414 DVVTRKGTGDTELVQKVRLLIIDEVHMLHDERGAVLESLVARTERQVESTQSLIRIVGLS 473
Query: 853 TALANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN-SMNKPAYAA 910
L N D+AD+L V + GLF F S RPVPLE H G GK + ++++ A+
Sbjct: 474 ATLPNFIDVADFLKVNRMQGLFYFDASFRPVPLEQHFIGVKGKAGTKQSRENLDEVAFDK 533
Query: 911 ICTH-SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQF-LGM-PEEDLQMV-LSQVT 966
+ V++FV SRR T TA L + A F M P+ D + +
Sbjct: 534 VREMLEKDHQVMVFVHSRRDTLQTAKMLHERAVDQACLDLFDPSMHPKYDAAIRDMKTCK 593
Query: 967 DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
+ LR + G+G+HHAG+ DR+L+E LFA ++VL CT+TLAWGVNLPA V+IKG
Sbjct: 594 ARELRDLVPKGMGIHHAGMTRSDRNLMERLFAEGVLKVLCCTATLAWGVNLPAAAVVIKG 653
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVE 1086
T+ Y + ++VD I D+LQ+ GRAGRPQ++ G +I K S Y + + P+E
Sbjct: 654 TQVYSAQEGKFVDLGILDVLQIFGRAGRPQFEDTGIGMICTTADKLSHYLTAVTDQLPIE 713
Query: 1087 SSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYL 1146
S +L D+ NAEI GT+ +AV ++ ++YL+ R+ NP YG+ E E +
Sbjct: 714 SRFSSKLVDNLNAEIALGTVTSIPEAVQWIGYSYLYVRMRKNPMAYGISWAEFEEDPELV 773
Query: 1147 SR---LVQNTFEDLEDSGCVKMTEDTVEPTM--LGTIASQYYLSYVTVSMFGSNIGPDTS 1201
R L L++ V E T E +G IASQYY+ + ++ +F + + P +
Sbjct: 774 QRRRTLAIQAARTLQECQMVIFNETTEELRSKDIGRIASQYYILHTSIQVFNTMMSPYAT 833
Query: 1202 LEVFLHILSGASEYDELPVRHNEDNHNEALSQ-RVRFAVD-NNRLDDPHVKANLLFQAHF 1259
L +++ + E+D + R +E + R D +D P K N+L QA+
Sbjct: 834 EADVLKMIAMSGEFDNIQSRDSEAKELTRMKDSRAAVPCDVAGGIDTPQAKTNILLQAYI 893
Query: 1260 SRLDLPISDYV--TDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFE 1317
S++ P D+ DL V Q+ RI +A+ I N W + + L + + + +W
Sbjct: 894 SKVQ-P-EDFALGNDLNYVAQQAGRICRAIFMIALNRRWGHQCLVLLTLAKSIEKRVWPF 951
Query: 1318 QDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV-SRLHQDLQRFPR 1376
Q L F + +L L A+ +V+ + D+ + ++ N ++L + FP
Sbjct: 952 QHP-LHQFE-LPKPILNQLDAKDSLSVEAMRDMEAAEIGALVHNHGAGTKLANMISNFPT 1009
Query: 1377 IQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSE 1436
+ V+ + + D L IR+ ++ R E++++ + N+ TSE
Sbjct: 1010 VSVEAEIAPLNRD-----VLRIRLFITPDFRWNDRLHGT------SESYYIWVDNSETSE 1058
Query: 1437 LY-----ALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFE 1478
+Y L R D + +P + + VSD +LG E
Sbjct: 1059 IYHHEFFILSRRKLYDDHELNFTIPLSDPLPTQIYVRAVSDRWLGAE 1105
Score = 100 (40.3 bits), Expect = 5.6e-86, Sum P(3) = 5.6e-86
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH----------LFNTQSDM 735
+ N +Q+ ++ I Y T+ N+L+ APTG+GKT +A L +LH L NT +
Sbjct: 289 YQTLNRMQSLVYPIAYKTNENMLVCAPTGAGKTDAAMLTILHAIGQYVTPNPLQNTTATD 348
Query: 736 KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEM---TGDYTPDLMALLSADII 786
V+ K + M + +LGK + + +YT D M L +I+
Sbjct: 349 FAVHTEDFKIVYVAPMKALAAEITEKLGKRLAWLGIRCREYTGD-MHLTKTEIV 401
Score = 60 (26.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 1456 PSGITTFQGMKL--VVVSDCYLGFEQEHSIEALVEQSV 1491
P I +G KL +VVSD YLG E SI SV
Sbjct: 1955 PQSIAGREGRKLDVIVVSDAYLGLEYRTSIHVPALPSV 1992
Score = 41 (19.5 bits), Expect = 8.7e-80, Sum P(3) = 8.7e-80
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 704 DNNVLLGAPTGSG 716
DN+ L GAP G G
Sbjct: 80 DNDYLDGAPNGDG 92
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 3457 (1222.0 bits), Expect = 0., P = 0.
Identities = 657/1498 (43%), Positives = 987/1498 (65%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VE TQ +R++GLSATLPNY +VA LRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 636 VELTQEDVRLIGLSATLPNYEDVATCLRVDPSKGLFYFDNSFRPVPLEQTYVGITEKKAI 695
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 696 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 754
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + + +N +L +L +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 755 STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAW 814
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D GEGI+ITSH +L
Sbjct: 815 GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDSKGEGILITSHGELQ 874
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL LL QLPIESQ + L D LNAE+ LG V N K+A WLGYTYL +RM NP YG
Sbjct: 875 YYLSLLNQQLPIESQMVGKLADMLNAEIVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYG 934
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+ D+ DP L ++ LV AA L+K ++++D++SG+F T+LGRIASHFYI + S
Sbjct: 935 VSHDDRSIDPLLERRRMDLVHTAATVLEKNNLVKYDKRSGSFQVTDLGRIASHFYITHES 994
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ TYN++L+ +++ E+ + S SSEF NI VR+EE+ EL+ L++ + P+ VK
Sbjct: 995 IMTYNQLLKPTLSEIELFRVFSLSSEFRNITVREEEKLELQKLLERV-PIPVKESIEEPS 1053
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI++L+Q YIS+ ++ F+L++D Y++ S R+MRA+FE L RGW +++ L CK
Sbjct: 1054 AKINVLLQAYISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLSRGWAQLTDKTLNLCK 1113
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF K LP E+++K+E++ +RL ++ +IG LIR G+ +
Sbjct: 1114 MIDKRMWQSMSPLRQFRK-LPEEVIKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIH 1172
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+Y+ FP + L+ + PITR+ LK+ L ITP+F W D HG+++ +WI+V+D +S+ + H
Sbjct: 1173 KYVHQFPKLDLAVHLQPITRSTLKVELTITPDFQWDDKIHGSSEAFWILVEDVDSEVVLH 1232
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L + A+ E ++F VP+FEP PPQY+IR SD WL E +SF +L LP+
Sbjct: 1233 HEYFLLKAKYAQDE-HLVTFFVPVFEPLPPQYFIRIASDRWLSCETQLPVSFRHLILPEK 1291
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALY-NFSHFNPIQTQIFHILYHTDNNVLLGAPTGSG 716
TELLDL+PLPV+AL N +E+LY NF FNPIQTQ+F+ +Y++D+NV +GAPTGSG
Sbjct: 1292 YPPPTELLDLQPLPVSALRNGAFESLYQNFPFFNPIQTQVFNAVYNSDDNVFVGAPTGSG 1351
Query: 717 KTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPD 776
KTI AE A+L + ++ + VYI P++A+ + DW + L K++V +TG+ + D
Sbjct: 1352 KTICAEFAILRMLLHNAEGRCVYITPMEALAEQVFLDWHQKFQENLNKKVVLLTGETSTD 1411
Query: 777 LMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMR 836
L L DII+STP+KWD +SR W R V+ V L I+DE+HL+G + GP+LEVI SRMR
Sbjct: 1412 LKLLGKGDIIVSTPDKWDILSRRWKQRKNVQNVSLFIIDEVHLIGGDNGPVLEVICSRMR 1471
Query: 837 YISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFY 896
YISSQ ER +R + LS++L+NA D+A WLG FNF P+VRPVPLE+HIQG+
Sbjct: 1472 YISSQIERPIRIVALSSSLSNAKDVAHWLGCSTTATFNFHPNVRPVPLELHIQGFNVSHT 1531
Query: 897 CPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEE 956
R+ SM KP Y AI HSP+KPVL+FV SRRQTRLTA+D++ F A+D P++FL E+
Sbjct: 1532 QTRLLSMAKPVYHAIMKHSPSKPVLVFVPSRRQTRLTAIDILTFCAADVVPQRFLHSTEK 1591
Query: 957 DLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVN 1016
DL + ++D L++TL G+G H GL+ +R +VE LF + IQV+V + +L WG N
Sbjct: 1592 DLVPFMENLSDVTLKETLSNGVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTN 1651
Query: 1017 LPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYK 1076
+ AHLVI+ T+YY+GK YVD+PI D+LQM+G+A RP D G+ VI+ KK F+K
Sbjct: 1652 ISAHLVIVMDTQYYNGKIHAYVDYPIYDVLQMVGKANRPLQDDEGRCVIMCQGSKKDFFK 1711
Query: 1077 KFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLED 1136
KFLYEP PVES L LHDHFNAEIV+ T+ +K+DAV YL+WT+L+RR+ NP YY L+
Sbjct: 1712 KFLYEPLPVESHLDHCLHDHFNAEIVTKTVENKQDAVDYLTWTFLYRRMTQNPNYYNLQG 1771
Query: 1137 TEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGSN 1195
LS +LS LV+NT +DLE S C+ + ++ V P LG IA+ YY++Y T+ +F +
Sbjct: 1772 MSHRHLSDHLSELVENTLQDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMS 1831
Query: 1196 IGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLF 1255
+ T + + I+S A+EY +P+RH+ED L+Q+V ++N + +DPHVK NLL
Sbjct: 1832 LNAKTKVRGLIEIISNAAEYKNIPIRHHEDTLLRQLAQKVPHKLNNPKFNDPHVKTNLLL 1891
Query: 1256 QAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW 1315
QAH SR+ L ++ +D + +L +++R+IQA +D+ +++GWLS ++ M L QMV Q +W
Sbjct: 1892 QAHLSRMQLS-AELQSDTEEILSKAVRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMW 1950
Query: 1316 FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVI--GNFPVSRLHQDLQR 1373
+DS L P ++L+ +G+ ++ ++++ E+ ++ + V+ + + R
Sbjct: 1951 -SKDSYLRQLPHFTSELIKRCTDKGVESIFDIMEMEDEDRTGLLQLSDVQVADVARFCNR 2009
Query: 1374 FPRIQVKLRL-QRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNT 1432
+P I++ + + DI + + + +++++ + T A FP+ ++E WW+V+G+
Sbjct: 2010 YPNIELSYEVVDKDDIKSGSPVVVQVQLEREE--EVTGPVIAPLFPQKREEGWWVVIGDP 2067
Query: 1433 NTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS 1490
++ L ++KR++ + ++ + + L +SD Y+G +QE+ V+++
Sbjct: 2068 KSNSLISIKRLTLQQKAKVKLDFVAPVVGVHNYTLYFMSDAYMGCDQEYKFSTEVKEA 2125
Score = 1025 (365.9 bits), Expect = 6.5e-99, Sum P(2) = 6.5e-99
Identities = 260/763 (34%), Positives = 412/763 (53%)
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAML-----HL-----FNTQSDM 735
F N IQ+++F TD N+L+ APTG+GKT A +AML H+ N +D
Sbjct: 475 FKSLNRIQSKLFKTTMETDENLLVCAPTGAGKTNVALMAMLREIGKHINMDGTINV-ADF 533
Query: 736 KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDG 795
K++YIAP++++V+E + + RL S G + E+TGD+ + + II+ TPEKWD
Sbjct: 534 KIIYIAPMRSLVQEMVGSFGKRLASY-GIIVSELTGDHQLCKEEINATQIIVCTPEKWDI 592
Query: 796 ISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTAL 855
I+R R Y + V L+I+DEIHLL +RGP+LE +++R T+ VR IGLS L
Sbjct: 593 ITRKGGERTYTQLVRLIIIDEIHLLHDDRGPVLESLIARTIRNVELTQEDVRLIGLSATL 652
Query: 856 ANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTH 914
N D+A L V GLF F S RPVPLE G K R MN+ Y I H
Sbjct: 653 PNYEDVATCLRVDPSKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEH 712
Query: 915 SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL--GMPE-EDLQMVLSQVTDQNLR 971
+ VL+FV SR++T TA + +T FL G E L+ Q + L+
Sbjct: 713 AGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELK 772
Query: 972 QTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYD 1031
L +G +HHAG+ DR+LVE+LFA+ IQVLV T+TLAWGVNLPAH VIIKGT+ Y
Sbjct: 773 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYS 832
Query: 1032 GKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRD 1091
+ R+ + DILQM+GRAGRPQYD G+ +++ + +Y L + P+ES +
Sbjct: 833 PEKGRWTELGALDILQMLGRAGRPQYDSKGEGILITSHGELQYYLSLLNQQLPIESQMVG 892
Query: 1092 QLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSR--- 1148
+L D NAEIV G + + +DAV++L +TYL+ R+ NP YG+ + + L R
Sbjct: 893 KLADMLNAEIVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYGVSHDD-RSIDPLLERRRM 951
Query: 1149 -LVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS-LEV 1204
LV LE + VK + + + T LG IAS +Y+++ ++ + + P S +E+
Sbjct: 952 DLVHTAATVLEKNNLVKYDKRSGSFQVTDLGRIASHFYITHESIMTYNQLLKPTLSEIEL 1011
Query: 1205 FLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDL 1264
F + S +SE+ + VR E + L +RV V + +++P K N+L QA+ S+L L
Sbjct: 1012 F-RVFSLSSEFRNITVREEEKLELQKLLERVPIPVKES-IEEPSAKINVLLQAYISQLKL 1069
Query: 1265 PISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWM 1324
+ D+ V + R+++A+ +I + GW + ++L +M+ + +W + S L
Sbjct: 1070 EGFALMADMVYVTQSAGRLMRAIFEIVLSRGWAQLTDKTLNLCKMIDKRMW-QSMSPLRQ 1128
Query: 1325 FPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LHQDLQRFPRIQVKLRL 1383
F + +++ + + ++L D+ + +I + + +H+ + +FP++ + + L
Sbjct: 1129 FRKLPEEVIKKIEKKNFP-FERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKLDLAVHL 1187
Query: 1384 Q---RRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDE 1423
Q R + E ++T + + D + +S AF + + E
Sbjct: 1188 QPITRSTLKVELTITPDFQWD--DKIHGSSEAFWILVEDVDSE 1228
Score = 40 (19.1 bits), Expect = 6.5e-99, Sum P(2) = 6.5e-99
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 351 FYIQYSSVETYNEMLRRHMNDSEVIEMVSHSS---EFENIVV 389
F++Q YN+ + EV+E++ +S E EN +V
Sbjct: 265 FWLQRQLSRFYNDAIVSQKKADEVLEILKTASDDRECENQLV 306
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 3440 (1216.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 708/1455 (48%), Positives = 969/1455 (66%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGIS-EPNF 59
VESTQ +IRIVGLSATLPNY++VA FL+VN GLFFFDSS+RP+PL Q +IG+ +P
Sbjct: 454 VESTQSLIRIVGLSATLPNYVDVADFLKVNKMAGLFFFDSSFRPVPLEQHFIGVKGKPGS 513
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
+ + + ++KV D L +GHQ MVFVHSRKDTV TA+ L +A + +F+ H
Sbjct: 514 KQSRDNIDTVTFEKVRDMLERGHQVMVFVHSRKDTVLTARMLKQMAVQDGCEALFSCHEH 573
Query: 120 PQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLA 179
S +D+ +R ++L +LF G HHAGM RSDR L E TLA
Sbjct: 574 ENYSNALRDMKHARARELRDLFASGFGTHHAGMSRSDRNLME--------------PTLA 619
Query: 180 WGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDKL 236
WGVNLPA VVIKGTQLY+P+ G + DLG+LD IFGRAGRPQF +G G I T+HDKL
Sbjct: 620 WGVNLPAAAVVIKGTQLYNPQEGKFVDLGILDVLQIFGRAGRPQFQDTGIGFICTTHDKL 679
Query: 237 AYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAY 296
+YL +TSQ PIES+F S L DNLNAE+ALGTVT++ E WLGY+YL +RMK P Y
Sbjct: 680 NHYLSAVTSQQPIESRFSSRLVDNLNAEIALGTVTSISEGVQWLGYSYLFVRMKREPRNY 739
Query: 297 GIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYS 356
GI + E+I DP L L++R L+ AA L K++M+ ++EK+ ++GRIAS +Y+ +
Sbjct: 740 GIDYTELIDDPGLVLRRRQLIIQAALVLQKSQMIIYNEKTEELRAKDVGRIASQYYVLQT 799
Query: 357 SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNK 416
S+E +NE++R +++V+ M+S S EF+NI R+ E EL L + EV+GG +
Sbjct: 800 SIEIFNELMRPRSGEADVLRMISMSGEFDNIQSRENESKELTRLREEAVQTEVEGGNDSA 859
Query: 417 HGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYC 476
K +IL+Q YISR I+ F+LVSD Y++ + ARI RALF L R W +L C
Sbjct: 860 QAKTNILLQSYISRAKIEDFALVSDTGYVAQNAARICRALFMIALNRRWGYQCQVLLSMC 919
Query: 477 KAVDRQIWPHQHPLRQFDKELPAEILRKLEER--GADLDRLQEMEEKDIGALIRYTPGGR 534
K++++Q+WP HP RQFD LP ILR LEE+ + ++ +++ME ++G L+ G+
Sbjct: 920 KSIEKQMWPFDHPFRQFD--LPQPILRNLEEKLPTSSVESMRDMETAELGQLVHNHKMGK 977
Query: 535 LVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDH 594
+ + L FP++ + A ++P+ R VL++ L + PEFTW D HGA++ +WI V++SE+
Sbjct: 978 TLAKLLDNFPTLSVEAEIAPLNRDVLRVRLMLYPEFTWNDRHHGASESYWIWVENSETSE 1037
Query: 595 IYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLAL 654
IYH E F L+++ + +L+FT+P+ +P P Q Y+RA+SD WL AE ISF +L
Sbjct: 1038 IYHHEYFILSRKKLYDD-HELNFTIPLSDPLPNQIYVRAISDRWLGAETVTPISFQHLIR 1096
Query: 655 PQARTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAP 712
P + +T+LL+L+PLP++AL N I E LY F +FNP+QTQ+FH+LYHT NVLLG+P
Sbjct: 1097 PDTESVYTDLLELQPLPISALKNPILEELYGQRFQYFNPMQTQLFHVLYHTAANVLLGSP 1156
Query: 713 TGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
TGSGKT++AELAM F + KVVYIAP+KA+VRER+ DW RL + +G ++VE+TGD
Sbjct: 1157 TGSGKTVAAELAMWWAFRERPGSKVVYIAPMKALVRERVMDWGRRLTAPMGLKLVELTGD 1216
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
TPD + ADIII+TPEKWDGISR+W +R+YV+KV L+I+DEIHLLG +RGPILE+IV
Sbjct: 1217 NTPDTRTIRDADIIITTPEKWDGISRSWQTRDYVRKVSLVIIDEIHLLGGDRGPILEIIV 1276
Query: 833 SRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYP 892
SRM YI+SQ++ +VR +G+STA ANA DLA+WLGV E GL+NF+ SVRPVPLE++I G+P
Sbjct: 1277 SRMNYIASQSKGSVRLMGMSTACANASDLANWLGVKE-GLYNFRHSVRPVPLEIYIDGFP 1335
Query: 893 G-KFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL 951
+ +CP M SMN+P + AI HSP KPV++FV+SRRQTRLTA DLI F ++ PR+F+
Sbjct: 1336 EQRGFCPLMQSMNRPTFLAIKNHSPEKPVIVFVASRRQTRLTAKDLINFCGMEDNPRRFV 1395
Query: 952 GMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
M E+DLQ+ L +V D LR+ L FGIGLHHAGL + DR L EELFANNKIQ+LV TSTL
Sbjct: 1396 RMSEDDLQLNLERVKDDALREALSFGIGLHHAGLVESDRQLAEELFANNKIQILVATSTL 1455
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
AWGVNLPAHLV++KGT+++D KT+ Y D +TD+LQM+GRAGRPQ+D G A I + K
Sbjct: 1456 AWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDVLQMLGRAGRPQFDSSGIARIFTQDSK 1515
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
K+FYK FL+ FPVES+L L +H AE+ +GTI K+DA+ YL+WT+ FRRL NP+Y
Sbjct: 1516 KAFYKHFLHTGFPVESTLHKVLDNHLGAEVSAGTIATKQDALDYLTWTFFFRRLHKNPSY 1575
Query: 1132 YGLE-------DTEAEGLSS-YLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQ 1181
YGLE EA+ L+ ++ LV + +L +S C+ T V+PT G I S
Sbjct: 1576 YGLEISADQHNSLEAQTLAQDFMIDLVDKSLSELSESSCIIFDSATGEVDPTPFGKIMSY 1635
Query: 1182 YYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVD- 1240
YYL++ T+ S+ P S L + A+E+DELPVRHNED N LS+ + AVD
Sbjct: 1636 YYLAHKTIRYLLSHAKPAPSFHDVLSWMCSATEFDELPVRHNEDLINAELSRNLPLAVDP 1695
Query: 1241 --NNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLS 1298
+ + DPHVKA LL QA+ SR+DLPISDYV D SVLDQSIRIIQA ID A G+ +
Sbjct: 1696 MGDLPMWDPHVKAFLLLQAYMSRIDLPISDYVGDQTSVLDQSIRIIQASIDAMAELGYTA 1755
Query: 1299 SSITCMHLLQMVMQGLWFEQDSALWMFPCMN--NDLLGTLRARGISTVQQLLDIPKENLQ 1356
+ T + LLQ + W D L + P ++ + + R S++ L +P +
Sbjct: 1756 ACRTFITLLQCIKSARW-PTDHPLSILPGVDPSTNTDKDSKTRLPSSLTSLTSLPHGAIT 1814
Query: 1357 TVIGNFPV-SRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTS-RAFA 1414
T+ G + + LH + +L + + E L++++ + N N R +A
Sbjct: 1815 TLPGKLHLPASLHSQFTKATSYLPRLAVSV-PLSSERGLSVSLT--RKNHPSNPDFRIYA 1871
Query: 1415 LRFPKIKDEAWWLVL 1429
RFPK + E ++L++
Sbjct: 1872 PRFPKPQTEGFFLLV 1886
Score = 779 (279.3 bits), Expect = 5.6e-76, Sum P(3) = 5.6e-76
Identities = 229/768 (29%), Positives = 368/768 (47%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
D K+VY+AP+KA+ E RL + LG ++ E+TGD ++ II++TPEKW
Sbjct: 349 DFKIVYVAPMKALAAEVTEKLGKRL-AWLGIKVRELTGDMQLTKREIVETQIIVTTPEKW 407
Query: 794 DGISR-NWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLS 852
D ++R + V+KV L+I+DE+H+L ERG ++E +V+R + T+ +R +GLS
Sbjct: 408 DVVTRKSTGDTELVQKVRLLIIDEVHMLHDERGAVIESLVARTQRQVESTQSLIRIVGLS 467
Query: 853 TALANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRM-NSMNKPAYAA 910
L N D+AD+L V ++ GLF F S RPVPLE H G GK + ++++ +
Sbjct: 468 ATLPNYVDVADFLKVNKMAGLFFFDSSFRPVPLEQHFIGVKGKPGSKQSRDNIDTVTFEK 527
Query: 911 ICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTD-- 967
+ V++FV SR+ T LTA L Q A D F E+ L +
Sbjct: 528 VRDMLERGHQVMVFVHSRKDTVLTARMLKQMAVQDGCEALFSCHEHENYSNALRDMKHAR 587
Query: 968 -QNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
+ LR G G HHAG++ DR+L+E TLAWGVNLPA V+IKG
Sbjct: 588 ARELRDLFASGFGTHHAGMSRSDRNLMEP--------------TLAWGVNLPAAAVVIKG 633
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVE 1086
T+ Y+ + ++VD I D+LQ+ GRAGRPQ+ G I K + Y + P+E
Sbjct: 634 TQLYNPQEGKFVDLGILDVLQIFGRAGRPQFQDTGIGFICTTHDKLNHYLSAVTSQQPIE 693
Query: 1087 SSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEA---EGLS 1143
S +L D+ NAEI GT+ + V +L ++YLF R+ P YG++ TE GL
Sbjct: 694 SRFSSRLVDNLNAEIALGTVTSISEGVQWLGYSYLFVRMKREPRNYGIDYTELIDDPGLV 753
Query: 1144 SYLSRLVQNTFEDLEDSGCVKMTEDTVEPTM--LGTIASQYYLSYVTVSMFGSNIGPDTS 1201
+L+ L+ S + E T E +G IASQYY+ ++ +F + P +
Sbjct: 754 LRRRQLIIQAALVLQKSQMIIYNEKTEELRAKDVGRIASQYYVLQTSIEIFNELMRPRSG 813
Query: 1202 LEVFLHILSGASEYDELPVRHNEDNHNEALSQR-VRFAVDNNRLDDPHVKANLLFQAHFS 1260
L ++S + E+D + R NE L + V+ V+ D K N+L Q++ S
Sbjct: 814 EADVLRMISMSGEFDNIQSRENESKELTRLREEAVQTEVEGGN-DSAQAKTNILLQSYIS 872
Query: 1261 RLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW-FEQD 1319
R + V+D V + RI +A+ I N W + + + + + +W F+
Sbjct: 873 RAKIEDFALVSDTGYVAQNAARICRALFMIALNRRWGYQCQVLLSMCKSIEKQMWPFDHP 932
Query: 1320 SALWMFPCMNNDLLGTLRAR-GISTVQQLLDIPKENLQTVIGNFPVSR-LHQDLQRFPRI 1377
+ P +L L + S+V+ + D+ L ++ N + + L + L FP +
Sbjct: 933 FRQFDLP---QPILRNLEEKLPTSSVESMRDMETAELGQLVHNHKMGKTLAKLLDNFPTL 989
Query: 1378 QVKLRLQ--RRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTS 1435
V+ + RD+ L + + + +W + + E++W+ + N+ TS
Sbjct: 990 SVEAEIAPLNRDV-----LRVRLMLYPEFTWNDRHHGAS--------ESYWIWVENSETS 1036
Query: 1436 ELY-----ALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFE 1478
E+Y L R D + +P + + +SD +LG E
Sbjct: 1037 EIYHHEYFILSRKKLYDDHELNFTIPLSDPLPNQIYVRAISDRWLGAE 1084
Score = 93 (37.8 bits), Expect = 5.6e-76, Sum P(3) = 5.6e-76
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
K +P++++ + N +Q+ ++ + Y T N+L+ APTG+GKT +A L +L+
Sbjct: 265 KLVPISSMDGLCQGTFKGYKTLNRMQSLLYDVAYKTSENMLICAPTGAGKTDAAMLTILN 324
Score = 41 (19.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1453 MELPSGITTFQGMKLVVVSDCYLGFEQEHS-IEALVE 1488
++ P I Q + + V+SD Y G E S +E + E
Sbjct: 1947 VKFPRDIPVPQRVNVRVISDSYPGMEWVVSGVEVVAE 1983
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 3434 (1213.9 bits), Expect = 0., P = 0.
Identities = 662/1499 (44%), Positives = 991/1499 (66%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E TQ +R++GLSATLPNY +VA FLRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 639 IEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAI 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 699 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 757
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + + +N +L +L +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 758 STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW 817
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D GEGI+ITSH +L
Sbjct: 818 GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ 877
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL LL QLPIESQ +S L D LNAE+ LG V N K+A WLGY YL IRM +P YG
Sbjct: 878 YYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYG 937
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I D++ DP L ++ LV AA LDK ++++D+K+GNF TELGRIASH+YI +
Sbjct: 938 ISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDT 997
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
V+TYN++L+ +++ E+ + S SSEF+NI VR+EE+ EL+ L++ + P+ VK
Sbjct: 998 VQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLERV-PIPVKESIEEPS 1056
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI++L+Q +IS+ ++ F+L++D Y++ S R+MRA+FE L RGW +++ L CK
Sbjct: 1057 AKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCK 1116
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF K LP E+++K+E++ +RL ++ +IG LIR G+ +
Sbjct: 1117 MIDKRMWQSMCPLRQFRK-LPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIH 1175
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+Y+ FP ++LS + PITR+ LK+ L ITP+F W + HG+++ +WI+V+D +S+ I H
Sbjct: 1176 KYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILH 1235
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L + A+ E ++F VP+FEP PPQY+IR VSD WL E +SF +L LP+
Sbjct: 1236 HEYFLLKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEK 1294
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
TELLDL+PLPV+AL N+ +E+LY F FNPIQTQ+F+ +Y++D+NV +GAPTGS
Sbjct: 1295 YPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGS 1354
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKTI AE A+L + S+ + VYI P++A+ + DW ++ +L K++V +TG+ +
Sbjct: 1355 GKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLTGETST 1414
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
DL L +IIISTPEKWD +SR W R V+ + L ++DE+HL+G E GP+LEVI SRM
Sbjct: 1415 DLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVHLIGGENGPVLEVICSRM 1474
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
RYISSQ ER +R + LS++L+NA D+A WLG FNF P+VRPVPLE+HIQG+
Sbjct: 1475 RYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISH 1534
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R+ SM KP Y AI HSP KPV++FV SR+QTRLTA+D++ A+D ++FL E
Sbjct: 1535 TQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTE 1594
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+DL L +++D L++TL G+G H GL+ +R LVE+LF++ IQV+V + +L WG+
Sbjct: 1595 KDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGM 1654
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N+ AHLVII T+YY+GK YVD+PI D+LQM+G A RP D G+ VI+ KK F+
Sbjct: 1655 NVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFF 1714
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEP PVES L +HDHFNAEIV+ TI +K+DAV YL+WT+L+RR+ NP YY L+
Sbjct: 1715 KKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQ 1774
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGS 1194
LS +LS LV+ T DLE S C+ + ++ V P LG IA+ YY++Y T+ +F
Sbjct: 1775 GISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSM 1834
Query: 1195 NIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
++ T + + I+S A+EY+ +P+RH+EDN L+Q+V ++N + +DPHVK NLL
Sbjct: 1835 SLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLL 1894
Query: 1255 FQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGL 1314
QAH SR+ L ++ +D + +L ++IR+IQA +D+ +++GWLS ++ M L QMV Q +
Sbjct: 1895 LQAHLSRMQLS-AELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAM 1953
Query: 1315 WFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKE--NLQTVIGNFPVSRLHQDLQ 1372
W +DS L P ++ + +G+ +V ++++ E N + + ++ + +
Sbjct: 1954 W-SKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCN 2012
Query: 1373 RFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGN 1431
R+P I++ + +D I + + +++++ + T A FP+ ++E WW+V+G+
Sbjct: 2013 RYPNIELSYEVVDKDSIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQKREEGWWVVIGD 2070
Query: 1432 TNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS 1490
++ L ++KR++ + ++ + T L +SD Y+G +QE+ V+++
Sbjct: 2071 AKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEA 2129
Score = 1040 (371.2 bits), Expect = 8.2e-102, P = 8.2e-102
Identities = 274/800 (34%), Positives = 426/800 (53%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +LL ++ LP A +E F N IQ++++ TD N+L
Sbjct: 446 HVPALKPKPFGSEEQLLPVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALETDENLL 500
Query: 709 LGAPTGSGKTISAELAML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRL 758
L APTG+GKT A + ML H+ N D K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVD-DFKIIYIAPMRSLVQEMVGSFGKRL 559
Query: 759 VSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIH 818
+ G + E+TGD+ + + II+ TPEKWD I+R R Y + V L+ILDEIH
Sbjct: 560 ATY-GITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIH 618
Query: 819 LLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFK 876
LL +RGP+LE +V+R +R I T+ VR IGLS L N D+A +L V GLF F
Sbjct: 619 LLHDDRGPVLEALVARAIRNIE-MTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFD 677
Query: 877 PSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALD 936
S RPVPLE G K R MN+ Y I H+ VL+FV SR++T TA
Sbjct: 678 NSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARA 737
Query: 937 LIQFAASDETPRQFL--GMPE-EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLV 993
+ +T FL G E L+ Q + L+ L +G +HHAG+ DR+LV
Sbjct: 738 IRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLV 797
Query: 994 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAG 1053
E+LFA+ IQVLV T+TLAWGVNLPAH VIIKGT+ Y + R+ + DILQM+GRAG
Sbjct: 798 EDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAG 857
Query: 1054 RPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAV 1113
RPQYD G+ +++ + +Y L + P+ES + +L D NAEIV G + + +DAV
Sbjct: 858 RPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAV 917
Query: 1114 HYLSWTYLFRRLAINPAYYGLEDTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT- 1169
++L + YL+ R+ +P YG+ + +G L LV L+ + VK + T
Sbjct: 918 NWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTG 977
Query: 1170 -VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNH 1227
+ T LG IAS YY++ TV + + P S +E+F + S +SE+ + VR E
Sbjct: 978 NFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELF-RVFSLSSEFKNITVREEEKLE 1036
Query: 1228 NEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAM 1287
+ L +RV V + +++P K N+L QA S+L L + D+ V + R+++A+
Sbjct: 1037 LQKLLERVPIPVKES-IEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAI 1095
Query: 1288 IDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL 1347
+I N GW + ++L +M+ + +W + L F + +++ + + ++L
Sbjct: 1096 FEIVLNRGWAQLTDKTLNLCKMIDKRMW-QSMCPLRQFRKLPEEVVKKIEKKNFP-FERL 1153
Query: 1348 LDIPKENLQTVIGNFPVSR-LHQDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMDKM 1403
D+ + +I + + +H+ + FP++++ + LQ R + E ++T + + D+
Sbjct: 1154 YDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDE- 1212
Query: 1404 NSWKNTSRAFALRFPKIKDE 1423
+S AF + + E
Sbjct: 1213 -KVHGSSEAFWILVEDVDSE 1231
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 3430 (1212.5 bits), Expect = 0., P = 0.
Identities = 660/1499 (44%), Positives = 990/1499 (66%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E TQ +R++GLSATLPNY +VA FLRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 639 IEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAI 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 699 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 757
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + + +N +L +L +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 758 STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW 817
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D GEGI+ITSH +L
Sbjct: 818 GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ 877
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL LL QLPIESQ +S L D LNAEV LG V N K+A WLGY YL IRM +P YG
Sbjct: 878 YYLSLLNQQLPIESQMVSKLPDMLNAEVVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYG 937
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I D++ DP L ++ LV AA LDK ++++D+K+GNF TELGRIASH+YI +
Sbjct: 938 ISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDT 997
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
V+TYN++L+ +++ E+ + S SSEF+NI VR+EE+ EL+ L++ + P+ VK
Sbjct: 998 VQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLERV-PIPVKESIEEPS 1056
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI++L+Q +IS+ ++ F+L++D Y++ S R+MRA+FE L RGW +++ L CK
Sbjct: 1057 AKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCK 1116
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF K LP E+++K+E++ +RL ++ +IG LIR G+ +
Sbjct: 1117 MIDKRMWQSMCPLRQFRK-LPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIH 1175
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+Y+ FP ++LS + PITR+ LK+ L ITP+F W + HG+++ +WI+V+D +S+ I H
Sbjct: 1176 KYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILH 1235
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L + A+ E ++F VP+FEP PPQY+IR VSD WL E +SF +L LP+
Sbjct: 1236 HEYFLLKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEK 1294
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
TELLDL+PLPV+AL N+ +E+LY F FNPIQTQ+F+ +Y++D+NV +GAPTGS
Sbjct: 1295 YPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGS 1354
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKTI AE A+L + S+ + VYI P++A+ + DW ++ +L K++V +TG+ +
Sbjct: 1355 GKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVYMDWYEKFQDRLSKKVVLLTGETST 1414
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
DL L +I+STPEKWD +SR W R V+ + L ++DE+HL+G E GP+LEVI SRM
Sbjct: 1415 DLKLLGKGSVIVSTPEKWDILSRRWKQRKNVQNINLFVVDEVHLIGGENGPVLEVICSRM 1474
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
RYISSQ ER +R + LS++L+NA D+A WLG FNF P+VRPVPLE+HIQG+
Sbjct: 1475 RYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISH 1534
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R+ SM KP Y AI HSP KPV++FV SR+QTRLTA+D++ A+D ++FL E
Sbjct: 1535 TQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTE 1594
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+DL L +++D L++TL G+G H GL+ +R LVE+LF++ IQV+V + +L WG+
Sbjct: 1595 KDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPLERRLVEQLFSSGAIQVVVASRSLCWGL 1654
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
N+ AHLVII T+YY+GKT YVD+PI D+LQM+G A RP D G+ VI+ KK F+
Sbjct: 1655 NVAAHLVIIMDTQYYNGKTHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFF 1714
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKFLYEP PVES L +HDHFNAEIV+ TI +K+DAV YL+WT+L+RR+ NP YY L+
Sbjct: 1715 KKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQ 1774
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGS 1194
LS +LS LV+ T DLE S C+ + ++ V P LG IA+ YY++Y T+ +F
Sbjct: 1775 GISHRHLSDHLSELVEQTLSDLEQSKCISVEDEMDVAPLNLGMIAAYYYINYTTIELFSM 1834
Query: 1195 NIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
++ T + + I+S A+EY+ +P+RH+ED+ L+Q+V ++N + +DPHVK NLL
Sbjct: 1835 SLNAKTKVRGLIEIISNAAEYENIPIRHHEDSLLRQLAQKVPHKLNNPKFNDPHVKTNLL 1894
Query: 1255 FQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGL 1314
QAH SR+ L ++ +D + +L ++IR+IQA +D+ +++GWLS ++ M L QM Q +
Sbjct: 1895 LQAHLSRMQLS-AELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMATQAM 1953
Query: 1315 WFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKE--NLQTVIGNFPVSRLHQDLQ 1372
W +DS L P ++ + +G+ +V ++++ E N + + ++ + +
Sbjct: 1954 W-SKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLSDSQIADVARFCN 2012
Query: 1373 RFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGN 1431
R+P I++ + +D I + + +++++ + T A FP+ ++E WW+V+G+
Sbjct: 2013 RYPNIELSYEVVDKDAIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQKREEGWWVVIGD 2070
Query: 1432 TNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS 1490
++ L ++KR++ + ++ + T L +SD Y+G +QE+ V+++
Sbjct: 2071 AKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEA 2129
Score = 1039 (370.8 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 273/800 (34%), Positives = 426/800 (53%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +LL ++ LP A +E F N IQ++++ TD N+L
Sbjct: 446 HVPALKPKPFGSEEQLLPVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALETDENLL 500
Query: 709 LGAPTGSGKTISAELAML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRL 758
L APTG+GKT A + ML H+ N D K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVD-DFKIIYIAPMRSLVQEMVGSFGKRL 559
Query: 759 VSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIH 818
+ G + E+TGD+ + + II+ TPEKWD I+R R Y + V L+ILDEIH
Sbjct: 560 ATY-GITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLVILDEIH 618
Query: 819 LLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFK 876
LL +RGP+LE +V+R +R I T+ VR IGLS L N D+A +L V GLF F
Sbjct: 619 LLHDDRGPVLEALVARAIRNIE-MTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFD 677
Query: 877 PSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALD 936
S RPVPLE G K R MN+ Y I H+ VL+FV SR++T TA
Sbjct: 678 NSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARA 737
Query: 937 LIQFAASDETPRQFL--GMPE-EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLV 993
+ +T FL G E L+ Q + L+ L +G +HHAG+ DR+LV
Sbjct: 738 IRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLV 797
Query: 994 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAG 1053
E+LFA+ IQVLV T+TLAWGVNLPAH VIIKGT+ Y + R+ + DILQM+GRAG
Sbjct: 798 EDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAG 857
Query: 1054 RPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAV 1113
RPQYD G+ +++ + +Y L + P+ES + +L D NAE+V G + + +DAV
Sbjct: 858 RPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEVVLGNVQNAKDAV 917
Query: 1114 HYLSWTYLFRRLAINPAYYGLEDTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT- 1169
++L + YL+ R+ +P YG+ + +G L LV L+ + VK + T
Sbjct: 918 NWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTG 977
Query: 1170 -VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNH 1227
+ T LG IAS YY++ TV + + P S +E+F + S +SE+ + VR E
Sbjct: 978 NFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELF-RVFSLSSEFKNITVREEEKLE 1036
Query: 1228 NEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAM 1287
+ L +RV V + +++P K N+L QA S+L L + D+ V + R+++A+
Sbjct: 1037 LQKLLERVPIPVKES-IEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAI 1095
Query: 1288 IDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL 1347
+I N GW + ++L +M+ + +W + L F + +++ + + ++L
Sbjct: 1096 FEIVLNRGWAQLTDKTLNLCKMIDKRMW-QSMCPLRQFRKLPEEVVKKIEKKNFP-FERL 1153
Query: 1348 LDIPKENLQTVIGNFPVSR-LHQDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMDKM 1403
D+ + +I + + +H+ + FP++++ + LQ R + E ++T + + D+
Sbjct: 1154 YDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDE- 1212
Query: 1404 NSWKNTSRAFALRFPKIKDE 1423
+S AF + + E
Sbjct: 1213 -KVHGSSEAFWILVEDVDSE 1231
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 3420 (1209.0 bits), Expect = 0., P = 0.
Identities = 662/1502 (44%), Positives = 991/1502 (65%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E TQ +R++GLSATLPNY +VA FLRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 639 IEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAI 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 699 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 757
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + + +N +L +L +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 758 STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW 817
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D GEGI+ITSH +L
Sbjct: 818 GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ 877
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL LL QLPIESQ +S L D LNAE+ LG V N K+A WLGY YL IRM +P YG
Sbjct: 878 YYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYG 937
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I D++ DP L ++ LV AA LDK ++++D+K+GNF TELGRIASH+YI +
Sbjct: 938 ISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDT 997
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
V+TYN++L+ +++ E+ + S SSEF+NI VR+EE+ EL+ L++ + P+ VK
Sbjct: 998 VQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLERV-PIPVKESIEEPS 1056
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI++L+Q +IS+ ++ F+L++D Y++ S R+MRA+FE L RGW +++ L CK
Sbjct: 1057 AKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCK 1116
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+D+++W PLRQF K LP E+++K+E++ +RL ++ +IG LIR G+ +
Sbjct: 1117 MIDKRMWQSMCPLRQFRK-LPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIH 1175
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDH---FHGAAQRWWIIVQDSESDH 594
+Y+ FP ++LS + PITR+ LK+ L ITP+F W + HG+++ +WI+V+D +S+
Sbjct: 1176 KYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKARLVHGSSEAFWILVEDVDSEV 1235
Query: 595 IYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLAL 654
I H E F L + A+ E ++F VP+FEP PPQY+IR VSD WL E +SF +L L
Sbjct: 1236 ILHHEYFLLKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLIL 1294
Query: 655 PQARTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAP 712
P+ TELLDL+PLPV+AL N+ +E+LY F FNPIQTQ+F+ +Y++D+NV +GAP
Sbjct: 1295 PEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAP 1354
Query: 713 TGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
TGSGKTI AE A+L + S+ + VYI P++A+ + DW ++ +L K++V +TG+
Sbjct: 1355 TGSGKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLTGE 1414
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
+ DL L +IIISTPEKWD +SR W R V+ + L ++DE+HL+G E GP+LEVI
Sbjct: 1415 TSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVHLIGGENGPVLEVIC 1474
Query: 833 SRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYP 892
SRMRYISSQ ER +R + LS++L+NA D+A WLG FNF P+VRPVPLE+HIQG+
Sbjct: 1475 SRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFN 1534
Query: 893 GKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
R+ SM KP Y AI HSP KPV++FV SR+QTRLTA+D++ A+D ++FL
Sbjct: 1535 ISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLH 1594
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
E+DL L +++D L++TL G+G H GL+ +R LVE+LF++ IQV+V + +L
Sbjct: 1595 CTEKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLC 1654
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WG+N+ AHLVII T+YY+GK YVD+PI D+LQM+G A RP D G+ VI+ KK
Sbjct: 1655 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1714
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
F+KKFLYEP PVES L +HDHFNAEIV+ TI +K+DAV YL+WT+L+RR+ NP YY
Sbjct: 1715 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1774
Query: 1133 GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSM 1191
L+ LS +LS LV+ T DLE S C+ + ++ V P LG IA+ YY++Y T+ +
Sbjct: 1775 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIEL 1834
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKA 1251
F ++ T + + I+S A+EY+ +P+RH+EDN L+Q+V ++N + +DPHVK
Sbjct: 1835 FSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKT 1894
Query: 1252 NLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVM 1311
NLL QAH SR+ L ++ +D + +L ++IR+IQA +D+ +++GWLS ++ M L QMV
Sbjct: 1895 NLLLQAHLSRMQLS-AELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVT 1953
Query: 1312 QGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKE--NLQTVIGNFPVSRLHQ 1369
Q +W +DS L P ++ + +G+ +V ++++ E N + + ++ + +
Sbjct: 1954 QAMW-SKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVAR 2012
Query: 1370 DLQRFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLV 1428
R+P I++ + +D I + + +++++ + T A FP+ ++E WW+V
Sbjct: 2013 FCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQKREEGWWVV 2070
Query: 1429 LGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVE 1488
+G+ ++ L ++KR++ + ++ + T L +SD Y+G +QE+ V+
Sbjct: 2071 IGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGGHNYTLYFMSDAYMGCDQEYKFSVDVK 2130
Query: 1489 QS 1490
++
Sbjct: 2131 EA 2132
Score = 1042 (371.9 bits), Expect = 4.8e-102, P = 4.8e-102
Identities = 274/801 (34%), Positives = 426/801 (53%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +LL ++ LP A +E F N IQ++++ TD N+L
Sbjct: 446 HVPALKPKPFGSEEQLLPVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALETDENLL 500
Query: 709 LGAPTGSGKTISAELAML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRL 758
L APTG+GKT A + ML H+ N D K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVD-DFKIIYIAPMRSLVQEMVGSFGKRL 559
Query: 759 VSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIH 818
+ G + E+TGD+ + + II+ TPEKWD I+R R Y + V L++LDEIH
Sbjct: 560 ATY-GITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIVLDEIH 618
Query: 819 LLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFK 876
LL +RGP+LE +V+R +R I T+ VR IGLS L N D+A +L V GLF F
Sbjct: 619 LLHDDRGPVLEALVARAIRNIE-MTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFD 677
Query: 877 PSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALD 936
S RPVPLE G K R MN+ Y I H+ VL+FV SR++T TA
Sbjct: 678 NSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARA 737
Query: 937 LIQFAASDETPRQFL--GMPE-EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLV 993
+ +T FL G E L+ Q + L+ L +G +HHAG+ DR+LV
Sbjct: 738 IRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLV 797
Query: 994 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAG 1053
E+LFA+ IQVLV T+TLAWGVNLPAH VIIKGT+ Y + R+ + DILQM+GRAG
Sbjct: 798 EDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAG 857
Query: 1054 RPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAV 1113
RPQYD G+ +++ + +Y L + P+ES + +L D NAEIV G + + +DAV
Sbjct: 858 RPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAV 917
Query: 1114 HYLSWTYLFRRLAINPAYYGLEDTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT- 1169
++L + YL+ R+ +P YG+ + +G L LV L+ + VK + T
Sbjct: 918 NWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTG 977
Query: 1170 -VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNH 1227
+ T LG IAS YY++ TV + + P S +E+F + S +SE+ + VR E
Sbjct: 978 NFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELF-RVFSLSSEFKNITVREEEKLE 1036
Query: 1228 NEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAM 1287
+ L +RV V + +++P K N+L QA S+L L + D+ V + R+++A+
Sbjct: 1037 LQKLLERVPIPVKES-IEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAI 1095
Query: 1288 IDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL 1347
+I N GW + ++L +M+ + +W + L F + +++ + + ++L
Sbjct: 1096 FEIVLNRGWAQLTDKTLNLCKMIDKRMW-QSMCPLRQFRKLPEEVVKKIEKKNFP-FERL 1153
Query: 1348 LDIPKENLQTVIGNFPVSR-LHQDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMD-K 1402
D+ + +I + + +H+ + FP++++ + LQ R + E ++T + + D K
Sbjct: 1154 YDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEK 1213
Query: 1403 MNSWKNTSRAFALRFPKIKDE 1423
+S AF + + E
Sbjct: 1214 ARLVHGSSEAFWILVEDVDSE 1234
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 3389 (1198.0 bits), Expect = 0., P = 0.
Identities = 688/1511 (45%), Positives = 972/1511 (64%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E+T+ IR+VGLSATLPNY +VA FLRV+ + GLF FD SYRP+PL QQYIGIS
Sbjct: 663 IETTKENIRLVGLSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPL 722
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R +L++++CY+KV+ + HQ ++FVHSRK+T KTA+ + D A + L F +
Sbjct: 723 QRFQLMNDLCYQKVLAGAGK-HQVLIFVHSRKETSKTARAIRDTAMANDTLSRFLKEDSV 781
Query: 121 QLSLIK--KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
++ +D++K N DL ++ +HHAG+ R DR + E LFS+G ++VLV TATL
Sbjct: 782 TRDVLHSHEDIVK--NSDLKDILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATL 839
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPAHTV+IKGTQ+Y+P+ G W +L LD+ GRAGRPQ+D+ GEGIIIT + +
Sbjct: 840 AWGVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDQHGEGIIITGYSE 899
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
L YYL L+ QLPIESQFIS L D LNAE+ LGTV N +EAC WLGYTYL IRM NP
Sbjct: 900 LQYYLSLMNEQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTL 959
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
YG+ D + D L ++ L+ AA LDK ++++D KSG F T+LGRIAS++YI +
Sbjct: 960 YGLAPDALAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 1019
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
++ TYNE L+ M D ++ + S S EF+ + VR +E+ EL L+ + P+ +K
Sbjct: 1020 GTIATYNEHLKPTMGDIDLYRLFSLSDEFKYVTVRQDEKMELAKLLDRV-PIPIKETLEE 1078
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
KI++L+Q YIS+ ++ SL SD YI+ S R++RAL+E L+RGW +++ L
Sbjct: 1079 PSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNL 1138
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
K V +++W Q PLRQF L +IL +LE++ +R ++ +++G LIR G+
Sbjct: 1139 SKMVGKRMWSVQTPLRQFHG-LSNDILMQLEKKDLVWERYYDLSAQELGELIRSPKMGKP 1197
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
+ +++ FP + LSA V PITRTVL + L +TP+F W + H + +WIIV+D++ + I
Sbjct: 1198 LHKFIHQFPKVTLSAHVQPITRTVLNVELTVTPDFLWDEKIHKYVEPFWIIVEDNDGEKI 1257
Query: 596 YHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
H E F L K+ E L FTVPIFEP PPQY++R VSD WL +E +SF +L LP
Sbjct: 1258 LHHEYFLLKKQYI-DEDHTLHFTVPIFEPLPPQYFVRVVSDKWLGSETVLPVSFRHLILP 1316
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALY-NFSHFNPIQTQIFHILYHTDNNVLLGAPTG 714
+ TELLDL+PLPVTAL N YE LY +F HFNP+QTQ+F +LY+T++NVL+ APTG
Sbjct: 1317 EKYPPPTELLDLQPLPVTALRNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTG 1376
Query: 715 SGKTISAELAML--HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
SGKTI AE A+L H + M+VVYIAPL+AI +E+ W+ + LG +VE+TG+
Sbjct: 1377 SGKTICAEFAILRNHHEGPDATMRVVYIAPLEAIAKEQFRIWEGKFGKGLGLRVVELTGE 1436
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
DL L IIISTPEKWD +SR W R YV++V L I+DE+HL+G + GP+LEVIV
Sbjct: 1437 TALDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIGGQHGPVLEVIV 1496
Query: 833 SRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYP 892
SRMRYISSQ +R + LST+LANA DL +W+G GLFNF P VRPVPLE+HIQG
Sbjct: 1497 SRMRYISSQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVD 1556
Query: 893 GKFYCPRMNSMNKPAYAAICTHSPTK-PVLIFVSSRRQTRLTALDLIQFAASD--ETPRQ 949
+ RM +M KP Y AI H+ K P ++FV +R+ RLTA+DL+ ++ D ++P
Sbjct: 1557 ISSFEARMQAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPDF 1616
Query: 950 FLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
LG EE L + Q+ ++ L++TL GIG H GL+ D+ +V +LF +IQV V +S
Sbjct: 1617 LLGKLEE-LDPFVEQIREETLKETLCHGIGYLHEGLSSLDQEIVTQLFEAGRIQVCVMSS 1675
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+L WG L AHLV++ GT+YYDG+ + D+P+ D+LQMMGRA RP D GK VI H
Sbjct: 1676 SLCWGTPLTAHLVVVMGTQYYDGRENSHSDYPVPDLLQMMGRASRPLLDNAGKCVIFCHA 1735
Query: 1070 PKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINP 1129
P+K +YKKFLYE FPVES L+ LHD+FNAE+V+G I +K+DAV YL+WT+++RRL NP
Sbjct: 1736 PRKEYYKKFLYEAFPVESQLQHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLPQNP 1795
Query: 1130 AYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVE--PTMLGTIASQYYLSYV 1187
YY L+ LS +LS LV+NT DLE S C+++ ED +E P LG IAS YY+SY
Sbjct: 1796 NYYNLQGVSHRHLSDHLSELVENTLSDLEASKCIEV-EDEMELSPLNLGMIASYYYISYT 1854
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ F S + T ++ L IL+ ASEYD +P+R E++ L RF+ +N + DP
Sbjct: 1855 TIERFSSLLSSKTKMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQRFSFENPKCTDP 1914
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
HVKAN L QAHFSR ++ + D + VL + R++QAM+D+ +++GWL+ ++ M +
Sbjct: 1915 HVKANALLQAHFSRQNIG-GNLAMDQRDVLLSATRLLQAMVDVISSNGWLNLALLAMEVS 1973
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLR---ARGISTVQQLLDIPKENLQTVI--GNF 1362
QMV QG+W E+DS L P DL + + I TV L+++ E Q ++ +
Sbjct: 1974 QMVTQGMW-ERDSMLLQLPHFTKDLAKRCQENPGKNIETVFDLVEMEDEERQELLKMSDA 2032
Query: 1363 PVSRLHQDLQRFPRIQVKLRLQ-RRDIDGENSLTLNIRMDK-MNSWKNTSRAFALRFPKI 1420
+ + + RFP I + + +++ +TL + +++ M +LR+PK
Sbjct: 2033 QLLDIARFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKT 2092
Query: 1421 KDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQ-GMKLVVVSDCYLGFEQ 1479
K+E WWLV+G+T T++L A+KR+S ++ ++ + + L + D YLG +Q
Sbjct: 2093 KEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQ 2152
Query: 1480 EHSIEALVEQS 1490
E+S V+ S
Sbjct: 2153 EYSFSVDVKGS 2163
Score = 1015 (362.4 bits), Expect = 5.7e-99, P = 5.7e-99
Identities = 270/837 (32%), Positives = 439/837 (52%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
K + +T + + A N +Q++++ N+LL APTG+GKT A L +L
Sbjct: 484 KLVKITEMPDWAQPAFKGMQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQ 543
Query: 728 LF----NTQS-----DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLM 778
NT D K+VY+AP+KA+V E + + +RL G + E++GD +
Sbjct: 544 QLEMNRNTDGTYNHGDYKIVYVAPMKALVAEVVGNLSNRL-KDYGVIVRELSGDQSLTGR 602
Query: 779 ALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRY 837
+ II++TPEKWD I+R R Y + V L+I+DEIHLL RGP+LE IV+R +R
Sbjct: 603 EIEETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQ 662
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVHIQGYPGKFY 896
I + T+ +R +GLS L N D+A +L V + GLF F S RPVPL G K
Sbjct: 663 IET-TKENIRLVGLSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKP 721
Query: 897 CPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEE 956
R MN Y + + VLIFV SR++T TA + A +++T +FL
Sbjct: 722 LQRFQLMNDLCYQKVLAGAGKHQVLIFVHSRKETSKTARAIRDTAMANDTLSRFLKEDSV 781
Query: 957 DLQMVLSQ---VTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAW 1013
++ S V + +L+ L +G +HHAGL+ DR +VE LF+ +QVLV T+TLAW
Sbjct: 782 TRDVLHSHEDIVKNSDLKDILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAW 841
Query: 1014 GVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKS 1073
GVNLPAH VIIKGT+ Y+ + +++ D++QM+GRAGRPQYDQHG+ +I+ +
Sbjct: 842 GVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDQHGEGIIITGYSELQ 901
Query: 1074 FYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYG 1133
+Y + E P+ES +L D NAEIV GT+ + +A H+L +TYL+ R+ NP YG
Sbjct: 902 YYLSLMNEQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYG 961
Query: 1134 LE-DTEAEG--LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVT 1188
L D A+ L + L+ + L+ + VK + + T LG IAS YY+++ T
Sbjct: 962 LAPDALAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1021
Query: 1189 VSMFGSNIGPDTSLEVFLH-ILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
++ + ++ P T ++ L+ + S + E+ + VR +E L RV + L++P
Sbjct: 1022 IATYNEHLKP-TMGDIDLYRLFSLSDEFKYVTVRQDEKMELAKLLDRVPIPIKET-LEEP 1079
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
K N+L QA+ S+L L +D+ + + R+++A+ +I GW + ++L
Sbjct: 1080 SAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNLS 1139
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR- 1366
+MV + +W Q + L F ++ND+L L + + ++ D+ + L +I + + +
Sbjct: 1140 KMVGKRMWSVQ-TPLRQFHGLSNDILMQLEKKDL-VWERYYDLSAQELGELIRSPKMGKP 1197
Query: 1367 LHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWW 1426
LH+ + +FP++ + +Q N + L + D + W + E +W
Sbjct: 1198 LHKFIHQFPKVTLSAHVQPITRTVLN-VELTVTPDFL--WDEKIHKYV--------EPFW 1246
Query: 1427 LVLGNTNTSEL----YALKRISFSDRLNT-HMELPSGITTFQGMKLVVVSDCYLGFE 1478
+++ + + ++ Y L + + D +T H +P + VVSD +LG E
Sbjct: 1247 IIVEDNDGEKILHHEYFLLKKQYIDEDHTLHFTVPIFEPLPPQYFVRVVSDKWLGSE 1303
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 3378 (1194.2 bits), Expect = 0., P = 0.
Identities = 681/1470 (46%), Positives = 967/1470 (65%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGI-SEPNF 59
VESTQ MIR+VGLSATLPNY++VA FL VN +G+F+FD S+RP+PL QQ +G+ +
Sbjct: 422 VESTQSMIRVVGLSATLPNYMDVADFLGVNRSVGMFYFDQSFRPVPLQQQILGVRGKAGS 481
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
E + ++ Y+K+ D + QG Q MVFVHSRKDTV TA+ + +A Y + E+FN
Sbjct: 482 KLARENIDKVSYEKLADYINQGLQVMVFVHSRKDTVNTARTFIRMAVEYGESEIFNCSEA 541
Query: 120 PQLSLIKKDVM-KSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
K++ K+R+K+L ELF GVHHAGMLRSDR LTE++F G +KVL CTATL
Sbjct: 542 DSYEKYKREASNKNRSKELKELFVHGFGVHHAGMLRSDRNLTEKMFESGAIKVLCCTATL 601
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPA V++KGTQ+YD KAGG+ DLG+ D IFGRAGRPQ+++ G GI+ T+ DK
Sbjct: 602 AWGVNLPAAVVIVKGTQVYDSKAGGFVDLGISDVIQIFGRAGRPQYEKFGTGILCTTSDK 661
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
L +Y+ LLT Q PIES+F L DNLNAE++LGTVTNV+EA WLGYTY+ +RMK NP A
Sbjct: 662 LDHYVSLLTQQHPIESKFGDKLIDNLNAEISLGTVTNVEEAVQWLGYTYMMVRMKQNPFA 721
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
YGI W E+ DPSL+ ++R +V A+ L +M+ FDE S F +LGRIAS FY+
Sbjct: 722 YGIDWKELQEDPSLTNRRREMVFTCAKRLHHLQMIIFDENSEAFTPKDLGRIASDFYLLS 781
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
+SVE +N+M+ +++++ M+S SSEF++I R+EE EL+ LV+ P +V G +
Sbjct: 782 NSVEIFNQMMNPLATEADILSMISMSSEFDSIKFREEESKELKQLVEEDAPCQVAGDVDS 841
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
GK +IL+Q ++S+ I +L+SD+ Y++ + ARI R+LF + R W ++ ML
Sbjct: 842 PQGKTNILLQAFVSQAHIKDSALISDSNYVAQNSARICRSLFLIAMNRRWGKLMNIMLSL 901
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
CK++D++IW +HP+ QF ELP +LR ++ + + L++ME ++G L+ G +
Sbjct: 902 CKSIDKRIWAFEHPMTQF--ELPQPVLRNIKAKNPSMLALRDMEAGELGDLVHNFKMGSI 959
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
+ + +G FP I + + + PIT V+++ + + P+F W D +HG+AQ +W+ V++S+ I
Sbjct: 960 LYKLIGKFPFIDIESEIFPITTNVMRVHVDLQPDFVWDDKYHGSAQFFWLTVEESDRSEI 1019
Query: 596 YHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
H E F L K+ ++ F +P+ +P P Q +R VSDSW+ +E + +SF +L P
Sbjct: 1020 LHVEKFILHKKQLHSP-HEMDFMIPLSDPLPAQVVVRVVSDSWIGSETVHAVSFQHLIRP 1078
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAPT 713
T T+LL L+PLPVTAL N E +Y+ F +FNP+QT +FH LY+T+++V +G+PT
Sbjct: 1079 SNETIKTDLLHLQPLPVTALHNPDVEQIYSSKFKYFNPMQTMVFHSLYNTNSSVFVGSPT 1138
Query: 714 GSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY 773
GSGKT+ AELA+ H FN KVVYIAP+KA+VRER++DW++R+ +VE+TGD
Sbjct: 1139 GSGKTVVAELAIWHAFNEFPSSKVVYIAPMKALVRERVDDWRERICKNTSHRLVELTGDS 1198
Query: 774 TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVS 833
P + + ADIII+TPEK+DGISRNW +R +V++V L+I+DEIHLL ++RGPILE+IVS
Sbjct: 1199 LPTIQEVKEADIIITTPEKFDGISRNWQTRKFVQQVSLVIMDEIHLLASDRGPILEMIVS 1258
Query: 834 RMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPG 893
RM YISSQT++ +R +G+STA++NA D+A WLGV GLFNF SVRPVPL+++I G+P
Sbjct: 1259 RMNYISSQTKKPIRLLGMSTAVSNAFDMAGWLGVKN-GLFNFPQSVRPVPLQMYIDGFPE 1317
Query: 894 KF-YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
+CP M +MNKPA+ AI HSP KPVLIFV+SRRQTRLTALDLI + PR+FL
Sbjct: 1318 NLAFCPLMKTMNKPAFMAIKQHSPNKPVLIFVASRRQTRLTALDLIHLCGMESNPRRFLK 1377
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ +++LQ +L V D LR +LQFG+GLHHAGL + DR + +LF KIQ+L+ TSTLA
Sbjct: 1378 ISDDELQDILENVKDDTLRLSLQFGMGLHHAGLVESDRQISHKLFEQGKIQILIATSTLA 1437
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
WGVNLPAHLVIIKGT+++D K + Y D +TDILQMMGRAGRP YD G A++ E KK
Sbjct: 1438 WGVNLPAHLVIIKGTQFFDAKIEAYRDMDLTDILQMMGRAGRPAYDTSGIAIVYTKESKK 1497
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
FYK FL FPVESSL L +H AEI +GTI +++A+ +L+WT+L+RR NP YY
Sbjct: 1498 VFYKHFLNLGFPVESSLHKVLDNHIGAEISAGTITTRQEAMDFLTWTFLYRRAHNNPTYY 1557
Query: 1133 GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMT-EDTVEPTMLGTIASQYYLSYVTVSM 1191
G+ED G+S YL++L+ +T E+L +S CV D + T I+S YYLS++T+
Sbjct: 1558 GIEDISQYGISQYLAKLIDSTIENLVESKCVYTGGSDELHATPFLEISSYYYLSHLTMRN 1617
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLD---DPH 1248
F +N+ PD L +L A+EY+EL RH E+ N +SQ +R+ ++ + DPH
Sbjct: 1618 FVNNVTPDFEFRDCLRVLCQATEYNELATRHGEELINMEMSQAMRYPAEDLNCEFIWDPH 1677
Query: 1249 VKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQ 1308
VKA LL QA+ SR++LPI+DY D SVLDQ++RI+QA ID A G+ ++ + L+Q
Sbjct: 1678 VKAYLLIQAYMSRVELPIADYAQDTISVLDQALRILQAYIDAAAELGYFKVVMSFIQLMQ 1737
Query: 1309 MVMQGLWFEQD--SALWMFPCM-----NNDL--LGTLRARGISTVQQLLDIPKENLQTVI 1359
+ Q W++ D SAL + N L LG+++ + + + L + EN++
Sbjct: 1738 CIKQRYWYDDDPVSALPGLKLISEGKTNQTLKQLGSMKPGQLFGLAKKLGVKGENIENKE 1797
Query: 1360 GNFPVSRLHQD---LQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALR 1416
N+ D ++F +I L +I + ++ + + N N F +
Sbjct: 1798 TNYDYGDGDSDEMAKKQFVKIASHLPTGNLEIKQQEQDSIKVVLTHDNYPLNND--FKVY 1855
Query: 1417 FPKIK--DEAWWLVLGNTNTSELYALKRIS 1444
P W V+ + EL+ LKR S
Sbjct: 1856 CPHFPKPQRESWFVILHDG-EELHLLKRAS 1884
Score = 889 (318.0 bits), Expect = 9.0e-95, Sum P(2) = 9.0e-95
Identities = 239/771 (30%), Positives = 397/771 (51%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+ K+VY+APLKA+ E + + +L LG + E+TGD +++ II++TPEKW
Sbjct: 317 EFKIVYVAPLKALAAEIVEKYSKKL-KWLGINVRELTGDMQLTRQEIINTQIIVTTPEKW 375
Query: 794 DGISR-NWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGL 851
D ++R + V KV L+I+DE+HLL +RG ++E +V+R +R + S T+ +R +GL
Sbjct: 376 DVVTRKSTGDSELVAKVKLLIIDEVHLLHEDRGSVIETLVARTLRQVES-TQSMIRVVGL 434
Query: 852 STALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFYCP-RMNSMNKPAYA 909
S L N D+AD+LGV +G+F F S RPVPL+ I G GK +++K +Y
Sbjct: 435 SATLPNYMDVADFLGVNRSVGMFYFDQSFRPVPLQQQILGVRGKAGSKLARENIDKVSYE 494
Query: 910 AICTH-SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQ 968
+ + + V++FV SR+ T TA I+ A F + + + +++
Sbjct: 495 KLADYINQGLQVMVFVHSRKDTVNTARTFIRMAVEYGESEIFNCSEADSYEKYKREASNK 554
Query: 969 N----LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII 1024
N L++ G G+HHAG+ DR+L E++F + I+VL CT+TLAWGVNLPA +VI+
Sbjct: 555 NRSKELKELFVHGFGVHHAGMLRSDRNLTEKMFESGAIKVLCCTATLAWGVNLPAAVVIV 614
Query: 1025 KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
KGT+ YD K +VD I+D++Q+ GRAGRPQY++ G ++ K Y L + P
Sbjct: 615 KGTQVYDSKAGGFVDLGISDVIQIFGRAGRPQYEKFGTGILCTTSDKLDHYVSLLTQQHP 674
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSS 1144
+ES D+L D+ NAEI GT+ + E+AV +L +TY+ R+ NP YG++ E + S
Sbjct: 675 IESKFGDKLIDNLNAEISLGTVTNVEEAVQWLGYTYMMVRMKQNPFAYGIDWKELQEDPS 734
Query: 1145 YLSRLVQNTFEDLEDSGCVKM-----TEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPD 1199
+R + F + ++M + P LG IAS +YL +V +F + P
Sbjct: 735 LTNRRREMVFTCAKRLHHLQMIIFDENSEAFTPKDLGRIASDFYLLSNSVEIFNQMMNPL 794
Query: 1200 TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHF 1259
+ L ++S +SE+D + R E + L + +D P K N+L QA
Sbjct: 795 ATEADILSMISMSSEFDSIKFREEESKELKQLVEEDAPCQVAGDVDSPQGKTNILLQAFV 854
Query: 1260 SRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW-FEQ 1318
S+ + S ++D V S RI +++ I N W + L + + + +W FE
Sbjct: 855 SQAHIKDSALISDSNYVAQNSARICRSLFLIAMNRRWGKLMNIMLSLCKSIDKRIWAFEH 914
Query: 1319 DSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV-SRLHQDLQRFPRI 1377
+ P +L ++A+ S + L D+ L ++ NF + S L++ + +FP I
Sbjct: 915 PMTQFELP---QPVLRNIKAKNPSMLA-LRDMEAGELGDLVHNFKMGSILYKLIGKFPFI 970
Query: 1378 QVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSE- 1436
++ + I N + +++ + W + A F WL + ++ SE
Sbjct: 971 DIESEIF--PIT-TNVMRVHVDLQPDFVWDDKYHGSAQFF--------WLTVEESDRSEI 1019
Query: 1437 LYALKRISFSDRLNTHMELPSGITTFQGM--KLVV--VSDCYLGFEQEHSI 1483
L+ K I +L++ E+ I + ++VV VSD ++G E H++
Sbjct: 1020 LHVEKFILHKKQLHSPHEMDFMIPLSDPLPAQVVVRVVSDSWIGSETVHAV 1070
Score = 145 (56.1 bits), Expect = 9.0e-95, Sum P(2) = 9.0e-95
Identities = 38/130 (29%), Positives = 69/130 (53%)
Query: 685 NFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN---TQS-----DMK 736
N+ + N +Q+ ++ + Y+T+ N+L+ APTG+GKT A L +LH N T++ D+
Sbjct: 251 NYKNLNKMQSLVYPVAYNTNENMLVCAPTGAGKTDVALLTILHTINQFVTETVTEDGDVS 310
Query: 737 V-VYIAPLKAIVRERMNDWKDRLVSQLGKEMV-------EMTGDYTPDLMALLSADIIIS 788
V + K + + +V + K++ E+TGD +++ II++
Sbjct: 311 VDIDYDEFKIVYVAPLKALAAEIVEKYSKKLKWLGINVRELTGDMQLTRQEIINTQIIVT 370
Query: 789 TPEKWDGISR 798
TPEKWD ++R
Sbjct: 371 TPEKWDVVTR 380
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 3326 (1175.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 648/1334 (48%), Positives = 906/1334 (67%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGI-SEPNF 59
VES+Q MIRI+GLSATLPN+++VA FL VN ++G+F+FD S+RP PL QQ +G +
Sbjct: 451 VESSQSMIRIIGLSATLPNFMDVADFLGVNRQIGMFYFDQSFRPKPLEQQLLGCRGKAGS 510
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
E + ++ Y K+ + +++G+Q MVFVHSRK+TVK+A+ + LA ++++F D
Sbjct: 511 RQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKETVKSARNFIKLAESNHEVDLFAPDPI 570
Query: 120 PQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLA 179
+ + ++K+R+KD+ E+F G+HHAGM RSDR LTE++F +G +KVL CTATLA
Sbjct: 571 EK-DKYSRSLVKNRDKDMKEIFQFGFGIHHAGMARSDRNLTEKMFKDGAIKVLCCTATLA 629
Query: 180 WGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQF-DRSGEGIIITSHDK 235
WGVNLPA V+IKGTQ+YD K GG+ DLG+ D IFGR GRP F +G GI+ TS+D+
Sbjct: 630 WGVNLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDR 689
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
L +Y+ L+T Q PIES+F S L DNLNAE++LG+VTNV EA WLGYTY+ +RM+ NP
Sbjct: 690 LDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFT 749
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
YGI W+E+ DP L ++R ++ AAR L +M+ FDE S +F +LGR++S FY+
Sbjct: 750 YGIDWEEIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGRVSSDFYLLN 809
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
SVE +N+M +++V+ M+S SSEF+ I R+EE EL+ L ++
Sbjct: 810 ESVEIFNQMCDPRATEADVLSMISMSSEFDGIKFREEESKELKRLSDESVECQIGSQLDT 869
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
GK ++L+Q YIS+ I +L SD+ Y++ + RI RALF + R W + S ML
Sbjct: 870 PQGKANVLLQAYISQTRIFDSALSSDSNYVAQNSVRICRALFLIGVNRRWGKFSNVMLNI 929
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
CK++++++W HPL QFD LP I+R++ + ++ L E+E ++G L+ G
Sbjct: 930 CKSIEKRLWAFDHPLCQFD--LPENIIRRIRDTKPSMEHLLELEADELGELVHNKKAGSR 987
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
+ + L FP I + A + PIT V++I +A+ P+F W HG AQ +W+ V++S+ I
Sbjct: 988 LYKILSRFPKINIEAEIFPITTNVMRIHIALGPDFVWDSRIHGDAQFFWVFVEESDKSQI 1047
Query: 596 YHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
H E F L +R + ++ F +P+ +P PPQ ++ VSD+W+ E+ + ISF +L P
Sbjct: 1048 LHFEKFILNRRQLNNQ-HEMDFMIPLSDPLPPQVVVKVVSDTWIGCESTHAISFQHLIRP 1106
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
T T+LL L+PLP +AL N + E++Y F +FNP+QT F+ LY+T+ N +G+PTGS
Sbjct: 1107 FNETLQTKLLKLRPLPTSALQNPLIESIYPFKYFNPMQTMTFYTLYNTNENAFVGSPTGS 1166
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GKTI AELA+ H F T K+VYIAP+KA+VRER++DW+ ++ G ++VE+TGD P
Sbjct: 1167 GKTIVAELAIWHAFKTFPGKKIVYIAPMKALVRERVDDWRKKITPVTGDKVVELTGDSLP 1226
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
D + A I+I+TPEK+DGISRNW +R +V+ V L+I+DEIHLL ++RGPILE+IVSRM
Sbjct: 1227 DPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVSLIIMDEIHLLASDRGPILEMIVSRM 1286
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
YISSQT++ VR +G+STA++NA D+A WLGV + GL+NF SVRPVPL+++I G+P
Sbjct: 1287 NYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKDHGLYNFPSSVRPVPLKMYIDGFPDNL 1346
Query: 896 -YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMP 954
+CP M +MNKP + AI HSP KP LIFV+SRRQTRLTALDLI ++ PR+FL +
Sbjct: 1347 AFCPLMKTMNKPVFMAIKQHSPDKPALIFVASRRQTRLTALDLIHLCGMEDNPRRFLNID 1406
Query: 955 -EEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAW 1013
EE+LQ LSQVTD L+ +LQFGIGLHHAGL KDRS+ +LF NKIQ+L+ TSTLAW
Sbjct: 1407 DEEELQYYLSQVTDDTLKLSLQFGIGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLAW 1466
Query: 1014 GVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKS 1073
GVNLPAHLVIIKGT+++D K + Y D +TDILQMMGRAGRP YD G A++ E KK
Sbjct: 1467 GVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKESKKM 1526
Query: 1074 FYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYG 1133
FYK FL FPVESSL L DH AEI SG+I +K++A+ +LSWT+LFRR NP YYG
Sbjct: 1527 FYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYG 1586
Query: 1134 LED-TEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMF 1192
+ED T G+S +LS L+ +T E+L +S CV + D + T +I+S YY+S++T+
Sbjct: 1587 IEDDTSTAGVSEHLSSLIDSTLENLRESQCVLLHGDDIVATPFLSISSYYYISHLTIRQL 1646
Query: 1193 GSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLD------- 1245
I + + L LS A EY+ELPVR E NE +SQ+ R++V++ D
Sbjct: 1647 LKQIHDHATFQEVLRWLSLAVEYNELPVRGGEIIMNEEMSQQSRYSVESTFTDEFELPMW 1706
Query: 1246 DPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMH 1305
DPHVK LL QAH SR+DLPI+DY+ D SVLDQS+RI+QA ID+ + G+ + +T +
Sbjct: 1707 DPHVKTFLLLQAHLSRVDLPIADYIQDTVSVLDQSLRILQAYIDVASELGYFHTVLTMIK 1766
Query: 1306 LLQMVMQGLWFEQD 1319
++Q + QG W+E D
Sbjct: 1767 MMQCIKQGYWYEDD 1780
Score = 962 (343.7 bits), Expect = 1.8e-90, Sum P(3) = 1.8e-90
Identities = 266/868 (30%), Positives = 454/868 (52%)
Query: 652 LALPQA-RTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLG 710
+ +P A + S+ L K L ++ L ++ + ++ + N IQ+ ++ + Y T+ N+L+
Sbjct: 251 IIIPAADQASNKNYLYTKLLKISDL-DHFCKTVFPYETLNQIQSLVYPVAYKTNENMLIC 309
Query: 711 APTGSGKTISAELAMLHLFNT----------------QSDMKVVYIAPLKAIVRERMNDW 754
APTG+GKT ++A+L + NT D KV+Y+APLKA+ E ++ +
Sbjct: 310 APTGAGKT---DIALLTIINTIKQFSVVNGENEIDIQYDDFKVIYVAPLKALAAEIVDKF 366
Query: 755 KDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN-YVKKVGLMI 813
+L + ++ E+TGD +L+ +I++TPEKWD ++R + N V KV L+I
Sbjct: 367 SKKL-APFNIQVRELTGDMQLTKAEILATQVIVTTPEKWDVVTRKANGDNDLVSKVKLLI 425
Query: 814 LDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVG-EIG 871
+DE+HLL +RG ++E +V+R +R + S ++ +R IGLS L N D+AD+LGV +IG
Sbjct: 426 IDEVHLLHEDRGSVIETLVARTLRQVES-SQSMIRIIGLSATLPNFMDVADFLGVNRQIG 484
Query: 872 LFNFKPSVRPVPLEVHIQGYPGKFYCPRMN-SMNKPAYAAICTHSPTK-PVLIFVSSRRQ 929
+F F S RP PLE + G GK + +++K AY + V++FV SR++
Sbjct: 485 MFYFDQSFRPKPLEQQLLGCRGKAGSRQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKE 544
Query: 930 TRLTALDLIQFAASDETPRQFLGMP-EED-LQMVLSQVTDQNLRQTLQFGIGLHHAGLND 987
T +A + I+ A S+ F P E+D L + D+++++ QFG G+HHAG+
Sbjct: 545 TVKSARNFIKLAESNHEVDLFAPDPIEKDKYSRSLVKNRDKDMKEIFQFGFGIHHAGMAR 604
Query: 988 KDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQ 1047
DR+L E++F + I+VL CT+TLAWGVNLPA VIIKGT+ YD K ++D I+D++Q
Sbjct: 605 SDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFIDLGISDVIQ 664
Query: 1048 MMGRAGRPQYDQ-HGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTI 1106
+ GR GRP + +G ++ + Y + + P+ES +L D+ NAEI G++
Sbjct: 665 IFGRGGRPGFGSANGTGILCTSNDRLDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSV 724
Query: 1107 FHKEDAVHYLSWTYLFRRLAINPAYYGLEDTE-AEGLSSYLSR--LVQNTFEDLEDSGCV 1163
+ ++A+ +L +TY+F R+ NP YG++ E A Y R ++ L +
Sbjct: 725 TNVDEAIEWLGYTYMFVRMRKNPFTYGIDWEEIANDPQLYERRRKMIVVAARRLHALQMI 784
Query: 1164 KMTEDTVE--PTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVR 1221
E ++ LG ++S +YL +V +F P + L ++S +SE+D + R
Sbjct: 785 VFDEVSMHFIAKDLGRVSSDFYLLNESVEIFNQMCDPRATEADVLSMISMSSEFDGIKFR 844
Query: 1222 HNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSI 1281
E + LS ++LD P KAN+L QA+ S+ + S +D V S+
Sbjct: 845 EEESKELKRLSDESVECQIGSQLDTPQGKANVLLQAYISQTRIFDSALSSDSNYVAQNSV 904
Query: 1282 RIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGI 1341
RI +A+ I N W S +++ + + + LW D L F N ++ +R
Sbjct: 905 RICRALFLIGVNRRWGKFSNVMLNICKSIEKRLW-AFDHPLCQFDLPEN-IIRRIRDTKP 962
Query: 1342 STVQQLLDIPKENLQTVIGNFPV-SRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRM 1400
S ++ LL++ + L ++ N SRL++ L RFP+I ++ + I N + ++I +
Sbjct: 963 S-MEHLLELEADELGELVHNKKAGSRLYKILSRFPKINIEAEIF--PIT-TNVMRIHIAL 1018
Query: 1401 DKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDR-LNTHMELPSGI 1459
W + A F W+ + ++ S++ ++ + R LN E+ I
Sbjct: 1019 GPDFVWDSRIHGDAQFF--------WVFVEESDKSQILHFEKFILNRRQLNNQHEMDFMI 1070
Query: 1460 TTFQGM--KLVV--VSDCYLGFEQEHSI 1483
+ ++VV VSD ++G E H+I
Sbjct: 1071 PLSDPLPPQVVVKVVSDTWIGCESTHAI 1098
Score = 567 (204.7 bits), Expect = 3.1e-48, Sum P(2) = 3.1e-48
Identities = 166/571 (29%), Positives = 279/571 (48%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARN 63
T++ +R++G+S + N ++A +L V + GL+ F SS RP+PL + YI N A
Sbjct: 1293 TKQPVRLLGMSTAVSNAYDMAGWLGVK-DHGLYNFPSSVRPVPL-KMYIDGFPDNLAFCP 1350
Query: 64 ELLSEICYKKVVDSLRQGHQ----AMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNN-DT 118
L + K V +++Q H A++FV SR+ T TA L+ L ++ F N D
Sbjct: 1351 --LMKTMNKPVFMAIKQ-HSPDKPALIFVASRRQTRLTALDLIHLCGMEDNPRRFLNIDD 1407
Query: 119 HPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
+L V K ++ FG +G+HHAG+++ DR ++ +LF + +++L+ T+TL
Sbjct: 1408 EEELQYYLSQVTDDTLKLSLQ-FG--IGLHHAGLVQKDRSISHQLFQKNKIQILIATSTL 1464
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPAH V+IKGTQ +D K G+RD+ + DI GRAGRP +D +G I+ T K
Sbjct: 1465 AWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKESK 1524
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
+Y L P+ES L D+L AE+ G++TN +EA +L +T+L R NP
Sbjct: 1525 KMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTY 1584
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
YGI D A S L +L+ L +++ + + T I+S++YI +
Sbjct: 1585 YGIEDDTSTAGVSEHLS--SLIDSTLENLRESQCVLLH--GDDIVATPFLSISSYYYISH 1640
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVR------DEEQNELETL-VQTLCPVE 408
++ + + H EV+ +S + E+ + VR +EE ++ V++ E
Sbjct: 1641 LTIRQLLKQIHDHATFQEVLRWLSLAVEYNELPVRGGEIIMNEEMSQQSRYSVESTFTDE 1700
Query: 409 VKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEM 468
+ + H K +L+Q ++SR + + D + RI++A + G+
Sbjct: 1701 FELPMWDPHVKTFLLLQAHLSRVDLPIADYIQDTVSVLDQSLRILQAYIDVASELGYFHT 1760
Query: 469 SLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEME-EKDIGALI 527
L M++ + + + W P+ LP LR++++ EM ++ L+
Sbjct: 1761 VLTMIKMMQCIKQGYWYEDDPV----SVLPGLQLRRIKDYTFSEQGFIEMTPQQKKKKLL 1816
Query: 528 RYTPGGRL-VKQYLGYFPSIQLSATVSPITR 557
GR K+ L F + T S T+
Sbjct: 1817 TLEEIGRFGYKKLLNVFDQLTFGMTESEDTK 1847
Score = 62 (26.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 1291 CANSG-WLSSS-ITCMHLLQMV-MQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL 1347
C G W ++ + LQ+ ++ F + + M P L TL G ++L
Sbjct: 1770 CIKQGYWYEDDPVSVLPGLQLRRIKDYTFSEQGFIEMTPQQKKKKLLTLEEIGRFGYKKL 1829
Query: 1348 LDIPKE-NLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSW 1406
L++ + R QR P ++ ++ + + EN+ L ++S
Sbjct: 1830 LNVFDQLTFGMTESEDTKKRFVSVCQRLPVLE-GMKFEEQ----ENNEVLTFYSKHLSSK 1884
Query: 1407 KNTS-RAFALRFPKIKDEAWWLVLGNTNTSELYALKR 1442
N + +FPKI+ E W+L+ G+ EL +KR
Sbjct: 1885 HNNGFEVYCDKFPKIQKELWFLI-GHKG-DELLMIKR 1919
Score = 37 (18.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 1437 LYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDC 1473
L + R + LN +L G+T + K VS C
Sbjct: 1818 LEEIGRFGYKKLLNVFDQLTFGMTESEDTKKRFVSVC 1854
Score = 37 (18.1 bits), Expect = 1.8e-90, Sum P(3) = 1.8e-90
Identities = 12/60 (20%), Positives = 25/60 (41%)
Query: 83 QAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFG 142
Q+++ + K+ V +K+ L E N L ++ K + K+L++ G
Sbjct: 83 QSIIDSYKTKNAVAVYKKIGKLINEAETTLSSNVLLETVLQMVYKHQKQELEKELLDFLG 142
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 3310 (1170.2 bits), Expect = 0., P = 0.
Identities = 678/1510 (44%), Positives = 956/1510 (63%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+EST+ IR+VGLSATLPN +VA FLRV+ + GLF FD SYRP+PL QQYIGI+
Sbjct: 664 IESTKEHIRLVGLSATLPNCDDVASFLRVDLKNGLFIFDRSYRPVPLGQQYIGINVKKPL 723
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R +L+++ICY+KVV ++ HQ ++FVHSRK+T KTA+ + D A + L F +
Sbjct: 724 RRFQLMNDICYQKVV-AVAGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQ 782
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
++K +N DL EL +HHAG+ R+DR + E F G L+VL+ TATLAW
Sbjct: 783 SREILKCLAGLLKNNDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAW 842
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y+P+ G W +L LD+ GRAGRPQ+D+ GEGIIIT + KL
Sbjct: 843 GVNLPAHTVIIKGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSKLQ 902
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYLRL+ QLPIESQFIS L D LNAE+ LGT+ N +EAC WLGYTYL +RM NP YG
Sbjct: 903 YYLRLMNEQLPIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVRMVRNPTLYG 962
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+ D + D L ++ L+ AA LDK ++++D KSG+F T+LGRIAS++YI + +
Sbjct: 963 VSPDALAKDLLLEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIASYYYISHGT 1022
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ YNE L+ MND E+ + S S EF+ + VR +E+ EL L+ + P+ VK +
Sbjct: 1023 IAAYNENLKPTMNDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRV-PIPVKETLEDPS 1081
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI++L+Q+YIS+ ++ SL SD YI+ S R++RA+FE L+RGW ++S L K
Sbjct: 1082 AKINVLLQVYISKLKLEGLSLTSDMVYITQSAGRLLRAIFEIVLKRGWAQLSQKALNLSK 1141
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
V +++W Q PL QF +P EIL KLE+ +R ++ +++G LI GR +
Sbjct: 1142 MVGKRMWSVQTPLWQFPG-IPKEILMKLEKNDLVWERYYDLSSQELGELICNPKMGRPLH 1200
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+Y+ FP ++L+A V PI+R+VL++ L +TP+F W D + + +WIIV+D++ + I H
Sbjct: 1201 KYIHQFPKLKLAAHVQPISRSVLQVELTVTPDFHWDDKANKYVEPFWIIVEDNDGEKILH 1260
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F KR+ E L+FTVPI EP PPQY+IR VSD WL + +SF +L LP+
Sbjct: 1261 HEYFLFKKRVI-DEDHTLNFTVPISEPIPPQYFIRVVSDKWLDSPTVLPVSFRHLILPEK 1319
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALY-NFSHFNPIQTQIFHILYHTDNNVLLGAPTGSG 716
TELLDL+PLPV AL N YE LY +F HFNP+QTQ+F +LY+T +NV++ APTGSG
Sbjct: 1320 YPPPTELLDLQPLPVMALRNPSYETLYQDFKHFNPVQTQVFTVLYNTSDNVVVAAPTGSG 1379
Query: 717 KTISAELAML--HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT 774
KTI AE A+L HL S M+VVYIAPL+AI +E+ DW+ + LG +VE+TG+
Sbjct: 1380 KTICAEFAILRNHLEGPDSAMRVVYIAPLEAIAKEQFRDWEKKFGKGLGLRVVELTGETL 1439
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR 834
DL L IIISTPEKWD +SR W R Y+++V L I+DE+HL+G + G +LEVIVSR
Sbjct: 1440 LDLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIGGQGGQVLEVIVSR 1499
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
MRYISSQ +R + LST+LANA DL +W+G G+FNF P+VRPVPLE+HI G
Sbjct: 1500 MRYISSQVGNKIRIVALSTSLANAKDLGEWIGASSCGVFNFPPNVRPVPLEIHIHGVDIL 1559
Query: 895 FYCPRMNSMNKPAYAAICTHSPTK-PVLIFVSSRRQTRLTALDLIQFAASD--ETPRQFL 951
+ RM +M KP Y AI H+ K P ++FV +R+ RLTA+DLI ++ D ++P L
Sbjct: 1560 SFEARMQAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPDFLL 1619
Query: 952 GMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
G EE L+ L Q+ ++ L++TL+ GIG H GL++ D+ +V +LF +IQV V +S+L
Sbjct: 1620 GNLEE-LEPFLIQICEETLKETLRHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSL 1678
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
WG L AHLV++ GT +YDG+ + D+PI+++LQMMGR RP D GK VI H P+
Sbjct: 1679 CWGTPLKAHLVVVMGTHFYDGRENSHSDYPISNLLQMMGRGSRPLLDDAGKCVIFCHAPR 1738
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
K +YKKFLYE PVES L+ LHD+FNAE+V+ I +K+DAV YL+W++++RRL NP Y
Sbjct: 1739 KEYYKKFLYEALPVESHLQHFLHDNFNAEVVARVIENKQDAVDYLTWSFMYRRLPQNPNY 1798
Query: 1132 YGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVS 1190
Y L LS +LS LV+NT DLE S C+++ + + P LG IAS YY++Y T+
Sbjct: 1799 YNLLGVSHRHLSDHLSELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYYYINYTTIE 1858
Query: 1191 MFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVK 1250
F S + T ++ L IL+ ASEYD +P+R E++ L RF+ N R DP VK
Sbjct: 1859 RFSSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQRFSFQNPRCTDPRVK 1918
Query: 1251 ANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMV 1310
+ L QAHFSR + + V D VL + R++QAM+D+ +++G L+ ++ M + QMV
Sbjct: 1919 TSALLQAHFSRQKIS-GNLVMDQCEVLLSATRLLQAMVDVISSNGCLNLALLAMEVSQMV 1977
Query: 1311 MQGLWFEQDSALWMFPCMNNDLLGTLR---ARGISTVQQLLDIPKENLQTVI--GNFPVS 1365
QG+W ++DS L P DL I T+ L+++ + Q ++ + +
Sbjct: 1978 TQGMW-DRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDLVEMEDDKRQELLQMSDAQLL 2036
Query: 1366 RLHQDLQRFPRIQVKLRLQ-RRDIDGENSLTLNIRMDK-MNSWKNTSRAFALRFPKIKDE 1423
+ + RFP I + + ++ +TL + +++ M A R+PK K+E
Sbjct: 2037 DIARFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGPVDAPRYPKTKEE 2096
Query: 1424 AWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMK---LVVVSDCYLGFEQE 1480
WWLV+G T++L A+KRIS + +E + T G K L + D YLG +QE
Sbjct: 2097 GWWLVVGEAKTNQLMAIKRISLQRKAQVKLEF--AVPTETGEKSYTLYFMCDSYLGCDQE 2154
Query: 1481 HSIEALVEQS 1490
+S V+ S
Sbjct: 2155 YSFTVDVKDS 2164
Score = 1043 (372.2 bits), Expect = 6.4e-101, Sum P(2) = 6.4e-101
Identities = 263/772 (34%), Positives = 411/772 (53%)
Query: 660 SHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTI 719
S+ +L+ + LP A A N +Q++++ +N+LL APTG+GKT
Sbjct: 482 SNEKLVKISDLPEWA-----QPAFRGMQQLNRVQSKVYGTALFKADNILLCAPTGAGKTN 536
Query: 720 SAELAMLH----------LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEM 769
A L +LH FN + K+VY+AP+KA+V E ++ RL G + E+
Sbjct: 537 VAVLTILHQLGLNMNPGGTFN-HGNYKIVYVAPMKALVAEVVDSLSQRL-KDFGVTVKEL 594
Query: 770 TGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILE 829
+GD + + II++TPEKWD I+R R Y + V L+I+DEIHLL RGP+LE
Sbjct: 595 SGDQSLTGQEIKETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLDDNRGPVLE 654
Query: 830 VIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVH 887
IV+R +R I S T+ +R +GLS L N D+A +L V + GLF F S RPVPL
Sbjct: 655 SIVARTLRQIES-TKEHIRLVGLSATLPNCDDVASFLRVDLKNGLFIFDRSYRPVPLGQQ 713
Query: 888 IQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETP 947
G K R MN Y + + VLIFV SR++T TA + A +++T
Sbjct: 714 YIGINVKKPLRRFQLMNDICYQKVVAVAGKHQVLIFVHSRKETAKTARAIRDTAMANDTL 773
Query: 948 RQFL---GMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQV 1004
+FL E L+ + + + +L++ L +G +HHAGL DR +VE F +QV
Sbjct: 774 SRFLKEDSQSREILKCLAGLLKNNDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQV 833
Query: 1005 LVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAV 1064
L+ T+TLAWGVNLPAH VIIKGT+ Y+ + +++ D++QM+GRAGRPQYDQ G+ +
Sbjct: 834 LISTATLAWGVNLPAHTVIIKGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGI 893
Query: 1065 ILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRR 1124
I+ K +Y + + E P+ES +L D NAEIV GTI + +A H+L +TYL+ R
Sbjct: 894 IITGYSKLQYYLRLMNEQLPIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVR 953
Query: 1125 LAINPAYYGLE-DTEAEGLSSYLSR--LVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIA 1179
+ NP YG+ D A+ L R L+ + L+ + +K + + T LG IA
Sbjct: 954 MVRNPTLYGVSPDALAKDLLLEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIA 1013
Query: 1180 SQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAV 1239
S YY+S+ T++ + N+ P + + S + E+ + VR +E L RV V
Sbjct: 1014 SYYYISHGTIAAYNENLKPTMNDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV 1073
Query: 1240 DNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSS 1299
L+DP K N+L Q + S+L L +D+ + + R+++A+ +I GW
Sbjct: 1074 KET-LEDPSAKINVLLQVYISKLKLEGLSLTSDMVYITQSAGRLLRAIFEIVLKRGWAQL 1132
Query: 1300 SITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVI 1359
S ++L +MV + +W Q + LW FP + ++L L + ++ D+ + L +I
Sbjct: 1133 SQKALNLSKMVGKRMWSVQ-TPLWQFPGIPKEILMKLEKNDL-VWERYYDLSSQELGELI 1190
Query: 1360 GNFPVSR-LHQDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMD-KMNSW 1406
N + R LH+ + +FP++++ +Q R + E ++T + D K N +
Sbjct: 1191 CNPKMGRPLHKYIHQFPKLKLAAHVQPISRSVLQVELTVTPDFHWDDKANKY 1242
Score = 39 (18.8 bits), Expect = 6.4e-101, Sum P(2) = 6.4e-101
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 499 AEILRKLEERGADLDRLQEMEEKDI 523
A I+++L + A +E EKDI
Sbjct: 371 AAIVKELHAKRATAKEREEKREKDI 395
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 3291 (1163.5 bits), Expect = 0., P = 0.
Identities = 643/1499 (42%), Positives = 974/1499 (64%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E+TQ +R+VGLSATLPNY +VA FLRV P+ GLF+FD+SYRP+ L QQYIG++E
Sbjct: 639 IETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKAL 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K ++ + +Q +VFVHSRK+T KTA+ + D+ + L F +
Sbjct: 699 KRFQVMNEIVYEKTMEHAGR-NQVLVFVHSRKETGKTARAVRDMCLEQDTLGSFLKEGSA 757
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ +++ + + +N +L EL +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 758 SMEVLRTEAEQVKNTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAW 817
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y+P+ G W +L LD+ GRAGRPQ+D GEGI+IT+H +L
Sbjct: 818 GVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQ 877
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
+YL LL QLPIESQFIS L D LNAE+ LGTV ++++A WLGYTYL IRM NP YG
Sbjct: 878 FYLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYG 937
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+ D + ADP L + L+ AA L+++ ++++D K+G+F T+LGRIASH+Y+ + +
Sbjct: 938 VSHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHET 997
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ TYN++L++ +++ E+ + S SSEF +I VR+EE+ EL+ L++ + P+ +K
Sbjct: 998 MLTYNQLLKQTLSEIELFRVFSLSSEFRHISVREEEKLELQKLMERV-PIPIKESIEEHS 1056
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
K+++L+Q YIS+ ++ F+L+SD +I+ S AR+MRA+FE L RGW +++ L CK
Sbjct: 1057 AKVNVLLQAYISQLKLEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCK 1116
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+DR++W PLRQF K++P EI +KLE++ RL ++E ++G LIR G+ +
Sbjct: 1117 MIDRRMWQSMTPLRQF-KKMPDEIAKKLEKKHFPWGRLYDLEPHELGELIRVPKLGKTIH 1175
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+++ FP ++LS + PITR L++ L ITP+F W + HG ++ +W++++D +S+ I H
Sbjct: 1176 KFVHQFPKLELSTHIQPITRGTLRVELTITPDFQWDEKVHGQSEGFWVLIEDVDSELILH 1235
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L ++ ++ E Q L F VP+FEP PPQY++R VSD W+ AE +SF +L LP+
Sbjct: 1236 HEFFLLKQKYSQDEHQ-LKFFVPVFEPLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEK 1294
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
TELLDL+PLP++AL +E+ Y+ F FNPIQTQ+F+ +Y++D NV +GAPTGS
Sbjct: 1295 NMPPTELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGS 1354
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTP 775
GK AE A++ LF TQSD + VY+ +A+ DW + S L ++V++TG+
Sbjct: 1355 GKMTIAEFAIMRLFTTQSDARCVYLVSEEALADLVFADWHSKFGS-LDIKVVKLTGETGT 1413
Query: 776 DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRM 835
DL + ++I+T +KWD +SR W R V+ V L I+DE+ L+G E GP+LE++ SRM
Sbjct: 1414 DLKLIAKGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRM 1473
Query: 836 RYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKF 895
RYISSQ E+ +R + LS +L +A D+A WLG FNF PSVRP+PLE+HIQGY
Sbjct: 1474 RYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQGYNVTH 1533
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R+ +M+KP Y AI +S KPV++FVSSR+Q RLTA+D++ +AASD P +F E
Sbjct: 1534 NATRIATMSKPVYNAILKYSAHKPVIVFVSSRKQARLTAIDVLTYAASDLQPNRFFHAEE 1593
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
ED++ L ++TD+ L++TL G+ H GL+ D LVE+LF + +QV V + L WG+
Sbjct: 1594 EDIKPFLERMTDKTLKETLAQGVAYLHEGLSASDHRLVEQLFDSGAVQVAVISRDLCWGM 1653
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
++ AHLVII T++Y+GK Y D+PITD+LQM+GRA RP D K V++ KK F+
Sbjct: 1654 SISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFF 1713
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
KKF+ EP P+ES L ++HDHFNAE+V+ TI +K+DAV YL+WT+L+RRL NP YY L+
Sbjct: 1714 KKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQ 1773
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGS 1194
LS +LS LV+NT DLE S C+ + +D P LG IA+ YY++Y T+ +F
Sbjct: 1774 GVTHRHLSDHLSELVENTLSDLEQSKCISVEDDMDTLPLNLGMIAAYYYINYTTIELFSL 1833
Query: 1195 NIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRV--RFAVDNN---RLDDPHV 1249
++ T + L I+S A+EY+++ VRH+E+ LSQR+ + N + +DPH+
Sbjct: 1834 SLNSKTKVRGLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHI 1893
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
K NLL QAH SRL L + D + +L ++IR+IQA +D+ +++GWLS ++ M L QM
Sbjct: 1894 KTNLLLQAHLSRLQLG-PELQGDTEQILSKAIRLIQACVDVLSSNGWLSPAVAAMELAQM 1952
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVI--GNFPVSRL 1367
V Q +W +DS L P + +++ + I TV ++++ E+ ++ + ++ +
Sbjct: 1953 VTQAMW-SKDSYLKQLPHFSPEIVKRCTEKKIETVFDIMELEDEDRTRLLQLSDLQMADV 2011
Query: 1368 HQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWL 1427
+ R+P I++ + +D S T+N+ + + T A FP+ ++E WW+
Sbjct: 2012 ARFCNRYPNIELNYEVVDKDRINSGS-TVNVVVQLEREDEVTGPVIAPFFPQKREEGWWV 2070
Query: 1428 VLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEH--SIE 1484
V+G+ T+ L ++KR++ + ++ + L +SD YLG +QE+ SIE
Sbjct: 2071 VIGDPKTNSLLSIKRLTLQQKAKVKLDFVAPSPGKHDYTLYYMSDSYLGCDQEYKFSIE 2129
Score = 1048 (374.0 bits), Expect = 1.0e-102, P = 1.0e-102
Identities = 278/839 (33%), Positives = 446/839 (53%)
Query: 671 PVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAML---- 726
PV L + F N IQ++++ +D N+LL APTG+GKT A L M+
Sbjct: 463 PVDKLPKYVQPVFEGFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIG 522
Query: 727 -HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMAL 780
H+ N Q D K++Y+AP+K++V+E + ++ RL + E+TGD+ +
Sbjct: 523 KHINEDGTINAQ-DFKIIYVAPMKSLVQEMVGNFGRRLACY-NLTVSELTGDHQLTREQI 580
Query: 781 LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYIS 839
+ +I+ TPEKWD I+R R +V V L+I+DEIHLL ERGP+LE +V+R +R I
Sbjct: 581 AATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIE 640
Query: 840 SQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVHIQGYPGKFYCP 898
+ T+ VR +GLS L N D+A +L V + GLF F S RPV LE G K
Sbjct: 641 T-TQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALK 699
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL--GMPE- 955
R MN+ Y H+ VL+FV SR++T TA + +T FL G
Sbjct: 700 RFQVMNEIVYEKTMEHAGRNQVLVFVHSRKETGKTARAVRDMCLEQDTLGSFLKEGSASM 759
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
E L+ QV + L++ L +G +HHAG+ DR+LVE+LFA+ IQVLV T+TLAWGV
Sbjct: 760 EVLRTEAEQVKNTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGV 819
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPAH VIIKGT+ Y+ + R+V+ D+LQM+GRAGRPQYD G+ +++ + + FY
Sbjct: 820 NLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFY 879
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
L + P+ES +L D NAEIV GT+ H +DAV++L +TYL+ R+ NP YG+
Sbjct: 880 LSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVS 939
Query: 1136 DTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVS 1190
+ L + + L+ LE SG +K T + T LG IAS YYL++ T+
Sbjct: 940 HDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHETML 999
Query: 1191 MFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
+ + S +E+F + S +SE+ + VR E + L +RV + + +++
Sbjct: 1000 TYNQLLKQTLSEIELF-RVFSLSSEFRHISVREEEKLELQKLMERVPIPIKES-IEEHSA 1057
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
K N+L QA+ S+L L ++D+ + + R+++A+ +I GW + + L +M
Sbjct: 1058 KVNVLLQAYISQLKLEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKM 1117
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LH 1368
+ + +W + + L F M +++ L + +L D+ L +I + + +H
Sbjct: 1118 IDRRMW-QSMTPLRQFKKMPDEIAKKLEKKHFPW-GRLYDLEPHELGELIRVPKLGKTIH 1175
Query: 1369 QDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAW 1425
+ + +FP++++ +Q R + E ++T + + D+ S F + + E
Sbjct: 1176 KFVHQFPKLELSTHIQPITRGTLRVELTITPDFQWDE--KVHGQSEGFWVLIEDVDSE-- 1231
Query: 1426 WLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMK----LVVVSDCYLGFEQE 1480
L+L + E + LK+ +S + H +L + F+ + L +VSD ++G E +
Sbjct: 1232 -LILHH----EFFLLKQ-KYSQ--DEH-QLKFFVPVFEPLPPQYFLRIVSDRWIGAETQ 1281
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 3054 (1080.1 bits), Expect = 0., P = 0.
Identities = 615/1508 (40%), Positives = 933/1508 (61%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E R+VGLSATLPNY +VA FLRV PE L FFD+SYRP+PL QQYIG++E
Sbjct: 633 MEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LHFFDNSYRPVPLEQQYIGVTEKKAL 691
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R + ++E+ Y K+++ + Q +VFVHSRK+T KTA+ + D + L F +
Sbjct: 692 KRFQAMNEVVYDKIMEHAGKS-QVLVFVHSRKETAKTAKAIRDACLEKDTLSAFMREGSA 750
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + +++N DL +L +HHAGM R DR L E LF++ ++VL TATLAW
Sbjct: 751 STEILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAW 810
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y+P+ G W +LG LDI GRAGRPQ+D GEGI+IT+H +L
Sbjct: 811 GVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQ 870
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL L+ QLP+ESQ +S L D LNAEV LGTV++V EA WLGYT+L +RM NP YG
Sbjct: 871 YYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYG 930
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I ++ ADP L ++ L+ A LDKA ++++D++SG TELGRIASHFY Y S
Sbjct: 931 ITHEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYES 990
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
++TYN++L +D ++ + S SSEF+ + VRDEE+ EL+ + + P+ +K
Sbjct: 991 MQTYNKLLVETCSDIDLFRIFSMSSEFKLLSVRDEEKLELQKMAEH-APIPIKENLDEAS 1049
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
K ++L+Q YIS+ ++ F+L +D +++ S R+ RALFE L RGW ++ +L CK
Sbjct: 1050 AKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCK 1109
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
V ++ W +PL QF K++P+E++R ++++ DRL ++++ +G LI+ G+ +
Sbjct: 1110 MVTQRQWGSLNPLHQF-KKIPSEVVRSIDKKNYSFDRLYDLDQHQLGDLIKMPKMGKPLF 1168
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+++ FP ++++ + PITRT ++I L ITP+F W + HG+A+ +WI ++D++ + I H
Sbjct: 1169 KFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWDEKVHGSAEGFWIFIEDTDGEKILH 1228
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L ++ E + VP+F+P PP YY+R VSD W+ AE ISF +L LP+
Sbjct: 1229 HEFFLLKQKFCSDE-HVVKMIVPMFDPMPPLYYVRIVSDRWIGAETVLPISFRHLILPEK 1287
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALY---NFSHFNPIQTQIFHILYHTDNNVLLGAPTG 714
TELLDL+PLP++A+ N ++ ++ F FNPIQTQ+F ++ ++ NV++ AP G
Sbjct: 1288 YPPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNG 1347
Query: 715 SGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT 774
SGKT AELA+L F + K VYI P++ + + DWK RL +G +V +TG+ T
Sbjct: 1348 SGKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADWKRRLEPAIGHTIVLLTGEQT 1407
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR 834
DL +IISTPE+WD ISR W R V+ V L I D++H++GA G + EV+ SR
Sbjct: 1408 MDLKLAQRGQLIISTPERWDNISRRWKQRKSVQNVKLFIADDLHMIGASNGAVFEVVCSR 1467
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
RYISSQ E AVR + LS++L NA DL WLG FNF PS RPVPL++ I+ +
Sbjct: 1468 TRYISSQLESAVRVVALSSSLTNARDLGMWLGCSASATFNFMPSTRPVPLDLEIKSFNLS 1527
Query: 895 FYCPRMNSMNKPAYAAICTHS---PTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL 951
R +M +P Y AIC H+ KP L+FV RRQTR A+ L+ A +D P++FL
Sbjct: 1528 HNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRRQTRPVAVALLTMALADGAPKRFL 1587
Query: 952 GMPEED--LQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+ E D Q +L+ + D++LR+++ G+G H G KD +V++LF +N IQV V
Sbjct: 1588 RLAEHDDTFQALLADIEDESLRESVSCGVGFLHEGTAPKDVHIVQQLFESNAIQVCVVPR 1647
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+ + + + A+LV++ T++Y+GK Y D+PI D+L M+G A RP D K V++
Sbjct: 1648 GMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPILDSDAKCVVMCQT 1707
Query: 1070 PKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINP 1129
K+++YKKFL +P PVES L LHDHFNAEIV+ TI +K+DA+ YL+WT L+RR+ NP
Sbjct: 1708 SKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNP 1767
Query: 1130 AYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYV 1187
YY L+ T LS LS LV+ T +DLE+S C+ + + DTV LG IAS YY+SY
Sbjct: 1768 NYYNLQGTTHRHLSDALSELVELTLKDLENSKCIAVKDEMDTVSLN-LGMIASYYYISYQ 1826
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ +F ++ T + I+S +SE+ +P+RH ED L++R+ + N + DP
Sbjct: 1827 TIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVILRQLAERLPGQLKNQKFTDP 1886
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
HVK NLL AH SR+ L ++ D + ++ ++ R++QA +D+ +++GWLS +I M L
Sbjct: 1887 HVKVNLLIHAHLSRVKLT-AELNKDTELIVLRACRLVQACVDVLSSNGWLSPAIHAMELS 1945
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRL 1367
QM+ Q + + + L P + LL +A+ +++V +LL++ ++ ++ + L
Sbjct: 1946 QMLTQAM-YSNEPYLKQLPHCSAALLERAKAKEVTSVFELLELENDDRSDIL-QMEGAEL 2003
Query: 1368 HQDLQRF----PRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSR-AFALRFP-KIK 1421
D+ RF P I+V L+ + ++L L + +++ N + A FP K K
Sbjct: 2004 -ADVARFCNHYPSIEVATELENDVVTSNDNLMLAVSLERDNDIDGLAPPVVAPLFPQKRK 2062
Query: 1422 DEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEH 1481
+E WWLV+G++ ++ L +KR+ +++ + ++ + KL +SD YLG +QE
Sbjct: 2063 EEGWWLVIGDSESNALLTIKRLVINEKSSVQLDFAAPRPGHHKFKLFFISDSYLGADQEF 2122
Query: 1482 SIEALVEQ 1489
+ VE+
Sbjct: 2123 DVAFKVEE 2130
Score = 962 (343.7 bits), Expect = 4.0e-93, P = 4.0e-93
Identities = 247/757 (32%), Positives = 398/757 (52%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAML- 726
K + V+ L A + N IQ+++ + ++LL APTG+GKT A L ML
Sbjct: 454 KLVSVSELPKWAQPAFDGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQ 513
Query: 727 ----HLFNTQS----DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLM 778
HL S + K+VYIAP+K++V+E + + RL + G + EMTGD
Sbjct: 514 EIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMVGSFSKRL-APFGITVGEMTGDAQMSKE 572
Query: 779 ALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYI 838
++ +I+ TPEK+D ++R R Y + V L+I+DEIHLL +RGP+LE IV R
Sbjct: 573 QFMATQVIVCTPEKYDVVTRKGGERAYNQMVRLLIIDEIHLLHDDRGPVLESIVVRTIRQ 632
Query: 839 SSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCP 898
Q R +GLS L N D+A +L V L F S RPVPLE G K
Sbjct: 633 MEQNHDECRLVGLSATLPNYQDVATFLRVKPEHLHFFDNSYRPVPLEQQYIGVTEKKALK 692
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL---GMPE 955
R +MN+ Y I H+ VL+FV SR++T TA + +T F+
Sbjct: 693 RFQAMNEVVYDKIMEHAGKSQVLVFVHSRKETAKTAKAIRDACLEKDTLSAFMREGSAST 752
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
E L+ Q + +L+ L +G +HHAG+N DR+LVE+LFA+ IQVL T+TLAWGV
Sbjct: 753 EILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGV 812
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPAH VIIKGT+ Y+ + R+ + DI+QM+GRAGRPQYD G+ +++ + + +Y
Sbjct: 813 NLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYY 872
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
+ + PVES + +L D NAE+V GT+ +A ++L +T+LF R+ NP YG+
Sbjct: 873 LSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGIT 932
Query: 1136 DTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVS 1190
+A L + L+ L+ +G +K + + ++ T LG IAS +Y +Y ++
Sbjct: 933 HEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYESMQ 992
Query: 1191 MFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
+ + S +++F I S +SE+ L VR E + +++ + N LD+
Sbjct: 993 TYNKLLVETCSDIDLF-RIFSMSSEFKLLSVRDEEKLELQKMAEHAPIPIKEN-LDEASA 1050
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
K N+L QA+ S+L L D+ V + R+ +A+ +I GW + + L +M
Sbjct: 1051 KTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCKM 1110
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LH 1368
V Q W + L F + ++++ ++ + S +L D+ + L +I + + L
Sbjct: 1111 VTQRQWGSLNP-LHQFKKIPSEVVRSIDKKNYS-FDRLYDLDQHQLGDLIKMPKMGKPLF 1168
Query: 1369 QDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMDK 1402
+ +++FP++++ +Q R + E ++T + + D+
Sbjct: 1169 KFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWDE 1205
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 3054 (1080.1 bits), Expect = 0., P = 0.
Identities = 615/1508 (40%), Positives = 933/1508 (61%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E R+VGLSATLPNY +VA FLRV PE L FFD+SYRP+PL QQYIG++E
Sbjct: 633 MEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LHFFDNSYRPVPLEQQYIGVTEKKAL 691
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R + ++E+ Y K+++ + Q +VFVHSRK+T KTA+ + D + L F +
Sbjct: 692 KRFQAMNEVVYDKIMEHAGKS-QVLVFVHSRKETAKTAKAIRDACLEKDTLSAFMREGSA 750
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + +++N DL +L +HHAGM R DR L E LF++ ++VL TATLAW
Sbjct: 751 STEILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAW 810
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y+P+ G W +LG LDI GRAGRPQ+D GEGI+IT+H +L
Sbjct: 811 GVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQ 870
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL L+ QLP+ESQ +S L D LNAEV LGTV++V EA WLGYT+L +RM NP YG
Sbjct: 871 YYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYG 930
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
I ++ ADP L ++ L+ A LDKA ++++D++SG TELGRIASHFY Y S
Sbjct: 931 ITHEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYES 990
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
++TYN++L +D ++ + S SSEF+ + VRDEE+ EL+ + + P+ +K
Sbjct: 991 MQTYNKLLVETCSDIDLFRIFSMSSEFKLLSVRDEEKLELQKMAEH-APIPIKENLDEAS 1049
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
K ++L+Q YIS+ ++ F+L +D +++ S R+ RALFE L RGW ++ +L CK
Sbjct: 1050 AKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCK 1109
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
V ++ W +PL QF K++P+E++R ++++ DRL ++++ +G LI+ G+ +
Sbjct: 1110 MVTQRQWGSLNPLHQF-KKIPSEVVRSIDKKNYSFDRLYDLDQHQLGDLIKMPKMGKPLF 1168
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+++ FP ++++ + PITRT ++I L ITP+F W + HG+A+ +WI ++D++ + I H
Sbjct: 1169 KFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWDEKVHGSAEGFWIFIEDTDGEKILH 1228
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L ++ E + VP+F+P PP YY+R VSD W+ AE ISF +L LP+
Sbjct: 1229 HEFFLLKQKFCSDE-HVVKMIVPMFDPMPPLYYVRIVSDRWIGAETVLPISFRHLILPEK 1287
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALY---NFSHFNPIQTQIFHILYHTDNNVLLGAPTG 714
TELLDL+PLP++A+ N ++ ++ F FNPIQTQ+F ++ ++ NV++ AP G
Sbjct: 1288 YPPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNG 1347
Query: 715 SGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT 774
SGKT AELA+L F + K VYI P++ + + DWK RL +G +V +TG+ T
Sbjct: 1348 SGKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADWKRRLEPAIGHTIVLLTGEQT 1407
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR 834
DL +IISTPE+WD ISR W R V+ V L I D++H++GA G + EV+ SR
Sbjct: 1408 MDLKLAQRGQLIISTPERWDNISRRWKQRKSVQNVKLFIADDLHMIGASNGAVFEVVCSR 1467
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
RYISSQ E AVR + LS++L NA DL WLG FNF PS RPVPL++ I+ +
Sbjct: 1468 TRYISSQLESAVRVVALSSSLTNARDLGMWLGCSASATFNFMPSTRPVPLDLEIKSFNLS 1527
Query: 895 FYCPRMNSMNKPAYAAICTHS---PTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL 951
R +M +P Y AIC H+ KP L+FV RRQTR A+ L+ A +D P++FL
Sbjct: 1528 HNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRRQTRPVAVALLTMALADGAPKRFL 1587
Query: 952 GMPEED--LQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+ E D Q +L+ + D++LR+++ G+G H G KD +V++LF +N IQV V
Sbjct: 1588 RLAEHDDTFQALLADIEDESLRESVSCGVGFLHEGTAPKDVHIVQQLFESNAIQVCVVPR 1647
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+ + + + A+LV++ T++Y+GK Y D+PI D+L M+G A RP D K V++
Sbjct: 1648 GMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPILDSDAKCVVMCQT 1707
Query: 1070 PKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINP 1129
K+++YKKFL +P PVES L LHDHFNAEIV+ TI +K+DA+ YL+WT L+RR+ NP
Sbjct: 1708 SKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNP 1767
Query: 1130 AYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYV 1187
YY L+ T LS LS LV+ T +DLE+S C+ + + DTV LG IAS YY+SY
Sbjct: 1768 NYYNLQGTTHRHLSDALSELVELTLKDLENSKCIAVKDEMDTVSLN-LGMIASYYYISYQ 1826
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ +F ++ T + I+S +SE+ +P+RH ED L++R+ + N + DP
Sbjct: 1827 TIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVILRQLAERLPGQLKNQKFTDP 1886
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
HVK NLL AH SR+ L ++ D + ++ ++ R++QA +D+ +++GWLS +I M L
Sbjct: 1887 HVKVNLLIHAHLSRVKLT-AELNKDTELIVLRACRLVQACVDVLSSNGWLSPAIHAMELS 1945
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRL 1367
QM+ Q + + + L P + LL +A+ +++V +LL++ ++ ++ + L
Sbjct: 1946 QMLTQAM-YSNEPYLKQLPHCSAALLERAKAKEVTSVFELLELENDDRSDIL-QMEGAEL 2003
Query: 1368 HQDLQRF----PRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSR-AFALRFP-KIK 1421
D+ RF P I+V L+ + ++L L + +++ N + A FP K K
Sbjct: 2004 -ADVARFCNHYPSIEVATELENDVVTSNDNLMLAVSLERDNDIDGLAPPVVAPLFPQKRK 2062
Query: 1422 DEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEH 1481
+E WWLV+G++ ++ L +KR+ +++ + ++ + KL +SD YLG +QE
Sbjct: 2063 EEGWWLVIGDSESNALLTIKRLVINEKSSVQLDFAAPRPGHHKFKLFFISDSYLGADQEF 2122
Query: 1482 SIEALVEQ 1489
+ VE+
Sbjct: 2123 DVAFKVEE 2130
Score = 962 (343.7 bits), Expect = 4.0e-93, P = 4.0e-93
Identities = 247/757 (32%), Positives = 398/757 (52%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAML- 726
K + V+ L A + N IQ+++ + ++LL APTG+GKT A L ML
Sbjct: 454 KLVSVSELPKWAQPAFDGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQ 513
Query: 727 ----HLFNTQS----DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLM 778
HL S + K+VYIAP+K++V+E + + RL + G + EMTGD
Sbjct: 514 EIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMVGSFSKRL-APFGITVGEMTGDAQMSKE 572
Query: 779 ALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYI 838
++ +I+ TPEK+D ++R R Y + V L+I+DEIHLL +RGP+LE IV R
Sbjct: 573 QFMATQVIVCTPEKYDVVTRKGGERAYNQMVRLLIIDEIHLLHDDRGPVLESIVVRTIRQ 632
Query: 839 SSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCP 898
Q R +GLS L N D+A +L V L F S RPVPLE G K
Sbjct: 633 MEQNHDECRLVGLSATLPNYQDVATFLRVKPEHLHFFDNSYRPVPLEQQYIGVTEKKALK 692
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL---GMPE 955
R +MN+ Y I H+ VL+FV SR++T TA + +T F+
Sbjct: 693 RFQAMNEVVYDKIMEHAGKSQVLVFVHSRKETAKTAKAIRDACLEKDTLSAFMREGSAST 752
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
E L+ Q + +L+ L +G +HHAG+N DR+LVE+LFA+ IQVL T+TLAWGV
Sbjct: 753 EILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGV 812
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPAH VIIKGT+ Y+ + R+ + DI+QM+GRAGRPQYD G+ +++ + + +Y
Sbjct: 813 NLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYY 872
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
+ + PVES + +L D NAE+V GT+ +A ++L +T+LF R+ NP YG+
Sbjct: 873 LSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGIT 932
Query: 1136 DTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVS 1190
+A L + L+ L+ +G +K + + ++ T LG IAS +Y +Y ++
Sbjct: 933 HEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYESMQ 992
Query: 1191 MFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
+ + S +++F I S +SE+ L VR E + +++ + N LD+
Sbjct: 993 TYNKLLVETCSDIDLF-RIFSMSSEFKLLSVRDEEKLELQKMAEHAPIPIKEN-LDEASA 1050
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
K N+L QA+ S+L L D+ V + R+ +A+ +I GW + + L +M
Sbjct: 1051 KTNVLLQAYISQLKLEGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCKM 1110
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LH 1368
V Q W + L F + ++++ ++ + S +L D+ + L +I + + L
Sbjct: 1111 VTQRQWGSLNP-LHQFKKIPSEVVRSIDKKNYS-FDRLYDLDQHQLGDLIKMPKMGKPLF 1168
Query: 1369 QDLQRFPRIQVKLRLQ---RRDIDGENSLTLNIRMDK 1402
+ +++FP++++ +Q R + E ++T + + D+
Sbjct: 1169 KFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWDE 1205
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 2919 (1032.6 bits), Expect = 3.5e-304, P = 3.5e-304
Identities = 591/1503 (39%), Positives = 920/1503 (61%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
VE T +RIVGLSATLPNY +VA FLRV+P GLF FD SYRP PL Q++IG+++
Sbjct: 692 VEQTGDAVRIVGLSATLPNYRDVASFLRVDPAKGLFHFDGSYRPCPLKQEFIGVTDKKPI 751
Query: 61 ARNELLSEICYKKVVDSLRQG-HQAMVFVHSRKDTVKTAQKLVDLARRYEDL-EVFNNDT 118
+ +++++ICY KV++ + Q +Q ++FVHSRK+T KTA+ L D A E + ++ +D+
Sbjct: 752 KQLKIMNDICYNKVIEHVGQNRNQMLIFVHSRKETAKTAKYLRDKALEMETIGQILKSDS 811
Query: 119 HPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
+ +++ ++ + L ++ G+HHAG+ +DR + LF +G ++VLVCTATL
Sbjct: 812 ASR-AILAEEAESVNDAALKDILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATL 870
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLG---MLDIFGRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPAHTV+IKGTQ+Y P+ G W +L +L + GRAGRPQ+D GEGIIIT+ +
Sbjct: 871 AWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQAE 930
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
+ YYL L+ QLPIESQ +S L DN+NAE+ LG + E WLGYTYL +RM +P
Sbjct: 931 IQYYLSLMNQQLPIESQLVSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGL 990
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
Y +G D D +L K+ LV AA L+KA ++++D+K+G TELGRIASH+YI +
Sbjct: 991 YSVGADYE-NDDALEQKRVDLVHSAAVLLEKAGLVKYDKKTGRLQSTELGRIASHYYIGH 1049
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
+S+ TYN+ L+ + + E+ + + S EF+ I VR +E+ EL ++ + PV VK G
Sbjct: 1050 NSMLTYNQHLQPSIGNIELFRIFALSDEFKYIPVRQDEKLELAKMLGRV-PVPVKEGIDE 1108
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
H KI++L+Q YISR ++ +L++D Y++ S RI+RALFE CLRRGW ++ L+
Sbjct: 1109 PHAKINVLLQAYISRLKLEGLALMADLVYVTQSAGRILRALFEICLRRGWASVAKNALDL 1168
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
CK +R++WP PLRQF + P +IL+K E +++ +G L+ G+
Sbjct: 1169 CKMAERRMWPTMSPLRQFPR-CPRDILQKSERIDVPWGSYFDLDPPRMGELLGMPRAGKT 1227
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
V + FP +++ A V PITR++L++ L ITP F W + HG AQ +WI+V+D + + I
Sbjct: 1228 VCDLVSKFPRLEVQAQVQPITRSMLRVELTITPNFVWDEELHGTAQDFWIMVEDCDGEEI 1287
Query: 596 YHSELFTLTKRMARGETQK--LSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLA 653
+ F L K A E + + FTVPI EP PP Y+I VSD W+H+E +SF L
Sbjct: 1288 LFHDQFVLRKDYAESEMNEHLVEFTVPITEPMPPNYFISLVSDRWMHSETRIAVSFQKLI 1347
Query: 654 LPQARTSHTELLDLKPLPVTALGNNIYEALY-NFSHFNPIQTQIFHILYHTDNNVLLGAP 712
LP+ HT LLD++ PV AL + Y+ LY ++ +FN IQTQ F L+ +D+NV +GAP
Sbjct: 1348 LPERFPPHTPLLDMQRAPVKALKRDEYQRLYPDWEYFNKIQTQTFKTLFESDDNVFIGAP 1407
Query: 713 TGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLG-KEMVEMTG 771
TGSGKT+ AELA+L + + + VY+AP + ++ R+ DWK RL G K + ++TG
Sbjct: 1408 TGSGKTVCAELAILRHWAKEDSGRAVYVAPFQELIDSRLEDWKKRLSGLAGGKSIAKLTG 1467
Query: 772 DYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVI 831
+ T DL L +D++++TP +WD +SR W R V+ V L + DE+H+LG G + EV+
Sbjct: 1468 EMTADLKILAGSDLVLATPTQWDVLSRQWQKRKNVRAVELFVADELHMLGGYGGYVYEVV 1527
Query: 832 VSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGY 891
VSRM I+ QTE +R +GLS L+NA D+ +W+G + ++NF P RPVPLE+HIQ +
Sbjct: 1528 VSRMHSIALQTESGMRIVGLSVPLSNARDIGEWIGASKHTIYNFSPHARPVPLELHIQSF 1587
Query: 892 PGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL 951
+ M +M +PAY +I S KP LIFV +R+QTR TA+DL+ + D+ +FL
Sbjct: 1588 SIPHFPSLMLAMARPAYLSILQLSADKPALIFVPNRKQTRATAIDLLTACSIDDDEDRFL 1647
Query: 952 GMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
E+LQ +L +V ++ L ++L GIG +H L+ D+ +V L+ IQV++ + +
Sbjct: 1648 HADIEELQPLLGRVHERTLAESLSHGIGYYHEALSQTDKRIVSHLYNIGAIQVVIASRDV 1707
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
W +NL HLV++ GT++++G+ RY+D+PI++ILQM G+A RP D+ G+ V++V K
Sbjct: 1708 CWELNLTGHLVVVMGTQFFEGREHRYIDYPISEILQMFGKASRPGQDKVGRGVLMVPTVK 1767
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
+ +YKKFL E PVES L+ +HD F EI GTI +D+V +L++TY +RRL NP++
Sbjct: 1768 REYYKKFLNEALPVESHLQLYMHDAFVTEISQGTIASTQDSVDWLTYTYFYRRLLANPSF 1827
Query: 1132 YGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTV 1189
YGL D EGLS++LS LV+NT ++L ++ + + E D+V P +I + Y +SY+T+
Sbjct: 1828 YGLTDISHEGLSTFLSELVENTLKELSEAKIIDLDEEDDSVSPLNAASIGAYYNISYITM 1887
Query: 1190 SMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
F ++ T L+ L I++ A+E++ + +R +E++ + RV D PH
Sbjct: 1888 QTFLLSLSARTKLKGILEIVTAATEFESVQMRRHEEHILRRVYDRVPVKTSQVAFDSPHF 1947
Query: 1250 KANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQM 1309
K+ +L QAHFSR+ LPI D D + ++ +++ ++ A +DI A+ G +++ + M + QM
Sbjct: 1948 KSFVLLQAHFSRMQLPI-DLAKDQEVIVSKALNLLSACVDILASEGHMNA-MNAMEMSQM 2005
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDI--PKEN--LQTVIG--NFP 1363
V+Q +W ++DS L P + + I+ + + +D P EN T++ N
Sbjct: 2006 VVQAMW-DRDSPLKQIPHFGPEAIKVANEYNINDIFEFMDAMDPSENKDYNTLVKRLNLD 2064
Query: 1364 VSRLHQDL----QRFPRIQVKLRLQRRD--IDGENS-LTLNIRMDKMNSWKNTSRAFALR 1416
+L Q ++P +++ ++ + GE + L + + + + + A
Sbjct: 2065 NKQLAQAAAFTNNKYPILELDFEVEDPENITAGEPAYLKIKVEREVDEDEEFDTTVHAPF 2124
Query: 1417 FPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLG 1476
+P K E WWLV+G+ T L A+KR++ +L ++ + L ++ D Y+G
Sbjct: 2125 YPGQKMENWWLVVGDEKTRNLLAIKRVTIGRKLELRLDYTVPTPGEHELTLYLMCDSYVG 2184
Query: 1477 FEQ 1479
+Q
Sbjct: 2185 VDQ 2187
Score = 1041 (371.5 bits), Expect = 7.4e-101, Sum P(2) = 7.4e-101
Identities = 267/739 (36%), Positives = 402/739 (54%)
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLF----NTQS------DMKVVY 739
N IQT+ + + D N+L+ APTGSGKT A L++L N+Q+ D K+VY
Sbjct: 534 NRIQTKCYPSAFQDDGNMLVCAPTGSGKTNVAMLSILREVGKNRNSQTGEIMLDDFKIVY 593
Query: 740 IAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRN 799
I+PLKA+V+E++ ++ RL + G ++ E+TGD + +I++TPEK+D I+R
Sbjct: 594 ISPLKALVQEQVENFGRRL-APYGIKVAELTGDRQLTKQQIAETQVIVTTPEKFDVITRK 652
Query: 800 WHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANA 858
+Y K V L+I+DEIHLL ERGP++E IVSR +R + QT AVR +GLS L N
Sbjct: 653 ASETSYTKLVRLIIIDEIHLLHDERGPVIESIVSRTIRQVE-QTGDAVRIVGLSATLPNY 711
Query: 859 GDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTH--S 915
D+A +L V GLF+F S RP PL+ G K ++ MN Y + H
Sbjct: 712 RDVASFLRVDPAKGLFHFDGSYRPCPLKQEFIGVTDKKPIKQLKIMNDICYNKVIEHVGQ 771
Query: 916 PTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQ---VTDQNLRQ 972
+LIFV SR++T TA L A ET Q L ++ + V D L+
Sbjct: 772 NRNQMLIFVHSRKETAKTAKYLRDKALEMETIGQILKSDSASRAILAEEAESVNDAALKD 831
Query: 973 TLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L +G G+HHAGL+ DR V+ LF + IQVLVCT+TLAWGVNLPAH VIIKGT+ Y
Sbjct: 832 ILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTVIIKGTQVYSP 891
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQ 1092
+ +V+ D+LQM+GRAGRPQYD +G+ +I+ + + +Y + + P+ES L +
Sbjct: 892 EKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQAEIQYYLSLMNQQLPIESQLVSK 951
Query: 1093 LHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY--GLEDTEAEGLSSYLSRLV 1150
L D+ NAEIV G I +++ V +L +TYLF R+ +P Y G + + L LV
Sbjct: 952 LADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYENDDALEQKRVDLV 1011
Query: 1151 QNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPDT-SLEVFLH 1207
+ LE +G VK + T ++ T LG IAS YY+ + ++ + ++ P ++E+F
Sbjct: 1012 HSAAVLLEKAGLVKYDKKTGRLQSTELGRIASHYYIGHNSMLTYNQHLQPSIGNIELF-R 1070
Query: 1208 ILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPIS 1267
I + + E+ +PVR +E + RV V +D+PH K N+L QA+ SRL L
Sbjct: 1071 IFALSDEFKYIPVRQDEKLELAKMLGRVPVPVKEG-IDEPHAKINVLLQAYISRLKLEGL 1129
Query: 1268 DYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPC 1327
+ DL V + RI++A+ +IC GW S + + L +M + +W S L FP
Sbjct: 1130 ALMADLVYVTQSAGRILRALFEICLRRGWASVAKNALDLCKMAERRMWPTM-SPLRQFPR 1188
Query: 1328 MNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDL-QRFPRIQVKLRLQ-- 1384
D+L + D+ + ++G + DL +FPR++V+ ++Q
Sbjct: 1189 CPRDILQKSERIDVPW-GSYFDLDPPRMGELLGMPRAGKTVCDLVSKFPRLEVQAQVQPI 1247
Query: 1385 -RRDIDGENSLTLNIRMDK 1402
R + E ++T N D+
Sbjct: 1248 TRSMLRVELTITPNFVWDE 1266
Score = 41 (19.5 bits), Expect = 7.4e-101, Sum P(2) = 7.4e-101
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 199 PKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAY 238
P G ++ ML I G+ + ++GE I+ K+ Y
Sbjct: 556 PTGSGKTNVAMLSILREVGKNRNSQTGE--IMLDDFKIVY 593
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 2898 (1025.2 bits), Expect = 5.9e-302, P = 5.9e-302
Identities = 596/1424 (41%), Positives = 893/1424 (62%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+ESTQ+M+R+VGLSATLPNY +VA FLRV P+ G+F+FDSSYRPIPL QQYIGIS+
Sbjct: 711 IESTQQMVRLVGLSATLPNYEDVATFLRVEPD-GVFYFDSSYRPIPLEQQYIGISDRGIK 769
Query: 61 ARNELLSEICYKKVVDSLRQG-HQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
+ + ++I + KV S R G HQ ++FVHSR++T KT + L D A + ++ + D
Sbjct: 770 -QLQRCNDITFTKV--SERVGDHQILIFVHSRRETAKTGKDLRDRAVEDQSIDRYIRDPA 826
Query: 120 PQLSLIKKDVMKS-RNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
+ +++ K +N +L +L +G+HHAG+ RSDR L E LF + ++VL+ TATL
Sbjct: 827 SR-EILRATASKQIQNAELKDLLPYGIGIHHAGLSRSDRSLVEDLFGDNRIQVLISTATL 885
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDI---FGRAGRPQFDRSGEGIIITSHDK 235
AWGVNLPAHTV+IKGTQ+Y+P+ G W +L LD+ GRAGRP FD+ GEGIIITS +
Sbjct: 886 AWGVNLPAHTVIIKGTQIYNPEKG-WCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQHE 944
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
L +YL LL +QL IESQFIS + DNLNAE+ LG++ V++A WLGYTYL I M NP
Sbjct: 945 LQFYLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPL 1004
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
Y I +D+ DP L ++ LV AA L+K ++++D KSG TELG++ASH+YI
Sbjct: 1005 YEISYDDFEKDPLLEQRRLDLVHSAATILEKNSLIKYDRKSGKLQSTELGKVASHYYITN 1064
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSN 415
SS+ Y E L+ M+D E++ + S SSEF+N+VVR+ E+ ELE L++ + P+ +K
Sbjct: 1065 SSMSIYQEHLKPSMSDIELLRVFSLSSEFKNVVVREGEKFELEKLLERV-PIPIKENIEE 1123
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEY 475
KI++L+Q YIS +D F+LV D YI+ S +RI RALFE L++GW +++ +L
Sbjct: 1124 PSSKINVLLQTYISNLKLDGFALVVDMFYIAQSASRITRALFEIVLKKGWAQLAKKILNL 1183
Query: 476 CKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL 535
K +D ++W Q PLRQF K P ++L +LE RG ++ L E + +G I+ G+
Sbjct: 1184 AKMIDSKMWSSQSPLRQFHKISP-KVLNQLERRGIPIEDLYEYNSQQLGNAIQNPSEGKQ 1242
Query: 536 VKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHI 595
+ + FP + L+A V PI +L++ L+ITP+F + + +H + WWIIV+D + + I
Sbjct: 1243 LFDLIHNFPKLDLTAHVQPILHGLLRVELSITPDFQYDERYHNNSIGWWIIVEDVDGERI 1302
Query: 596 YHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
+ E F+L K+M GE Q +SFTVP+ +P PPQYY+R +SD W+ AE ISF +L LP
Sbjct: 1303 LYFEYFSLKKKMVNGEDQLVSFTVPLSQPLPPQYYVRVISDHWIGAEYSLPISFQHLILP 1362
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLGAPT 713
+ LLDL+PLP+ L + E+++ FS FN IQTQ+F+ +Y +++N + APT
Sbjct: 1363 EKYPPCRPLLDLQPLPIQVLKDPKAESIFKPTFSIFNAIQTQVFNCMYQSNDNAFISAPT 1422
Query: 714 GSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDR--LVSQLGKEMVEMTG 771
SGKT+ AE+A++ F KVVY+AP++ + R+ DW ++ + S G + ++TG
Sbjct: 1423 NSGKTVCAEIALIRCFKQNPKAKVVYLAPMQDLASVRLKDWSNKFGVKSPFGLVVSDLTG 1482
Query: 772 DYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVI 831
D D L ++II++ EKWD +SR W R ++ + L+I+DE+HL+G E GP +E++
Sbjct: 1483 DAVTDNKILDRSNIIVTNCEKWDILSRKWKQRKALQSINLLIVDELHLIGGEYGPTMEIV 1542
Query: 832 VSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGY 891
VSRMRYIS+QT A+R I LS+++ANA DL W+G +NF P+VRP+P+E IQG+
Sbjct: 1543 VSRMRYISTQTGNALRVIALSSSIANARDLVLWIGATPQTCYNFHPNVRPIPVEYQIQGF 1602
Query: 892 PGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAAS--DETPRQ 949
+ RM +M KP + + + + +FV +R+ +R A D+I +S D +
Sbjct: 1603 EFPHFNARMLAMTKPTVYEVAKNKNQQSI-VFVPTRKLSRSLAADIIANVSSFEDTLTKP 1661
Query: 950 FLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+L E L L V L+Q+LQ G+ +H GL +++R +VE LF + I+VL+ T
Sbjct: 1662 YLVCEEHVLTPYLEDVDSFALKQSLQMGVAFYHDGLTERERRVVEILFRSGSIRVLIATH 1721
Query: 1010 TLAWGV-NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQ-----YDQHGKA 1063
++AW + N+ A LV+I GT+ Y GK RY+D+PI DILQM+GRAG+ + ++ K
Sbjct: 1722 SVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDYPINDILQMIGRAGKQEGGGVISNKVAKV 1781
Query: 1064 VILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFR 1123
++L H PKK +YK FL EP PVES L LHD FN+EIV+ TI K+DA+ YL+WT+L+R
Sbjct: 1782 LLLCHAPKKEYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFLYR 1841
Query: 1124 RLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQ 1181
RL NP YY L LS +LS LV+NT +LE S C+ + +D V P LG IAS
Sbjct: 1842 RLNQNPNYYNLSGVSHLHLSEHLSELVENTLVELEQSNCITIQDDQDKVSPLNLGIIASY 1901
Query: 1182 YYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDN 1241
YYL Y T+ +FGS++ T + I+S A E++ LP+RH ED L+ + +D
Sbjct: 1902 YYLKYQTIELFGSSLKSTTRRRGIMDIISNAPEFNSLPIRHREDQILMKLASHLPQKIDK 1961
Query: 1242 NRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSI 1301
+ K N+L Q HFSR + +D D K +L+ + R++QA++D+ +++ WL +I
Sbjct: 1962 PNYQEISTKVNVLLQCHFSRESIS-ADLYQDQKFILENATRLLQAIVDVISSNSWLQPAI 2020
Query: 1302 TCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKEN-LQTV-I 1359
M L QM+ Q +W + DS P MN + + ++GI +V L+ + + +Q + +
Sbjct: 2021 AAMELSQMITQAMW-DSDSVFKQLPHMNKRRIDAITSQGIESVFDLMSLDDNSRIQLLDL 2079
Query: 1360 GNFPVSRLHQDLQRFPRIQVKLRLQRRD-IDGENSLTLNIRMDK 1402
+ L Q ++P I + ++Q D + ++ +T+ + +++
Sbjct: 2080 SQQESNDLVQSFMKYPDIDISYQVQDEDDLHADSIMTVEMVIER 2123
Score = 1043 (372.2 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
Identities = 257/715 (35%), Positives = 393/715 (54%)
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSD----------MKVVY 739
N +Q+++F + TDNN+LL APT SGKT A L +LH D K+VY
Sbjct: 553 NRVQSKLFDCAFKTDNNLLLSAPTSSGKTNVAMLTILHEIGKNRDRDSGKIRLDAFKIVY 612
Query: 740 IAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRN 799
IAP+K++V+E + ++ RL S G + E+TGD + + II++TPEKWD I+R
Sbjct: 613 IAPMKSLVQEMVGNFSKRLKSY-GIVVNELTGDQSLTNKQISETQIIVTTPEKWDIITRK 671
Query: 800 WHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANA 858
R Y + V L+I+DEIHLL ERGP+LE IV+R +R I S T++ VR +GLS L N
Sbjct: 672 SGDRAYTQLVKLIIIDEIHLLHDERGPVLECIVARTLRMIES-TQQMVRLVGLSATLPNY 730
Query: 859 GDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTK 918
D+A +L V G+F F S RP+PLE G + ++ N + +
Sbjct: 731 EDVATFLRVEPDGVFYFDSSYRPIPLEQQYIGISDRGI-KQLQRCNDITFTKVSERVGDH 789
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMP--EEDLQMVLS-QVTDQNLRQTLQ 975
+LIFV SRR+T T DL A D++ +++ P E L+ S Q+ + L+ L
Sbjct: 790 QILIFVHSRRETAKTGKDLRDRAVEDQSIDRYIRDPASREILRATASKQIQNAELKDLLP 849
Query: 976 FGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTK 1035
+GIG+HHAGL+ DRSLVE+LF +N+IQVL+ T+TLAWGVNLPAH VIIKGT+ Y+ + K
Sbjct: 850 YGIGIHHAGLSRSDRSLVEDLFGDNRIQVLISTATLAWGVNLPAHTVIIKGTQIYNPE-K 908
Query: 1036 RYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHD 1095
+ + D+ QM+GRAGRP +D+ G+ +I+ + + FY L +ES ++ D
Sbjct: 909 GWCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQHELQFYLSLLNTQLSIESQFISRIAD 968
Query: 1096 HFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGL--EDTEAEGLSSYLSR-LVQN 1152
+ NAEIV G+I DAV++L +TYL+ + NP Y + +D E + L LV +
Sbjct: 969 NLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDFEKDPLLEQRRLDLVHS 1028
Query: 1153 TFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILS 1210
LE + +K + ++ T LG +AS YY++ ++S++ ++ P S L + S
Sbjct: 1029 AATILEKNSLIKYDRKSGKLQSTELGKVASHYYITNSSMSIYQEHLKPSMSDIELLRVFS 1088
Query: 1211 GASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYV 1270
+SE+ + VR E E L +RV + N +++P K N+L Q + S L L V
Sbjct: 1089 LSSEFKNVVVREGEKFELEKLLERVPIPIKEN-IEEPSSKINVLLQTYISNLKLDGFALV 1147
Query: 1271 TDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNN 1330
D+ + + RI +A+ +I GW + ++L +M+ +W Q S L F ++
Sbjct: 1148 VDMFYIAQSASRITRALFEIVLKKGWAQLAKKILNLAKMIDSKMWSSQ-SPLRQFHKISP 1206
Query: 1331 DLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDL-QRFPRIQVKLRLQ 1384
+L L RGI ++ L + + L I N + DL FP++ + +Q
Sbjct: 1207 KVLNQLERRGIP-IEDLYEYNSQQLGNAIQNPSEGKQLFDLIHNFPKLDLTAHVQ 1260
Score = 692 (248.7 bits), Expect = 9.4e-62, Sum P(2) = 9.4e-62
Identities = 153/436 (35%), Positives = 240/436 (55%)
Query: 1062 KAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYL 1121
K ++L H PKK +YK FL EP PVES L LHD FN+EIV+ TI K+DA+ YL+WT+L
Sbjct: 1780 KVLLLCHAPKKEYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFL 1839
Query: 1122 FRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIA 1179
+RRL NP YY L LS +LS LV+NT +LE S C+ + +D V P LG IA
Sbjct: 1840 YRRLNQNPNYYNLSGVSHLHLSEHLSELVENTLVELEQSNCITIQDDQDKVSPLNLGIIA 1899
Query: 1180 SQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAV 1239
S YYL Y T+ +FGS++ T + I+S A E++ LP+RH ED L+ + +
Sbjct: 1900 SYYYLKYQTIELFGSSLKSTTRRRGIMDIISNAPEFNSLPIRHREDQILMKLASHLPQKI 1959
Query: 1240 DNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSS 1299
D + K N+L Q HFSR + +D D K +L+ + R++QA++D+ +++ WL
Sbjct: 1960 DKPNYQEISTKVNVLLQCHFSRESIS-ADLYQDQKFILENATRLLQAIVDVISSNSWLQP 2018
Query: 1300 SITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKEN-LQTV 1358
+I M L QM+ Q +W + DS P MN + + ++GI +V L+ + + +Q +
Sbjct: 2019 AIAAMELSQMITQAMW-DSDSVFKQLPHMNKRRIDAITSQGIESVFDLMSLDDNSRIQLL 2077
Query: 1359 -IGNFPVSRLHQDLQRFPRIQVKLRLQRRD-IDGENSLTLNIRM------DKMNSWK-NT 1409
+ + L Q ++P I + ++Q D + ++ +T+ + + D+ N + N
Sbjct: 2078 DLSQQESNDLVQSFMKYPDIDISYQVQDEDDLHADSIMTVEMVIERDLGDDEENPIEIND 2137
Query: 1410 SR--AFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKL 1467
S A +PK K WW ++G++ + L A+KRI+F + E P+ + L
Sbjct: 2138 SINVVSAPYYPKEKICGWWALIGDSKNNHLLAIKRITFLKKTKVKFEFPTPAVGKHQLSL 2197
Query: 1468 VVVSDCYLGFEQEHSI 1483
+ SD Y G +QEH +
Sbjct: 2198 YLFSDSYNGCDQEHEL 2213
Score = 40 (19.1 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 969 NLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLV 1006
N +QT+ + L A ND++R +E+ ++N + + +
Sbjct: 394 NNKQTILYCTLLAKAE-NDQERKKIEDEMSSNPVTLSI 430
Score = 39 (18.8 bits), Expect = 9.4e-62, Sum P(2) = 9.4e-62
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 295 AYGIGWDEVIADPSLSLKQ 313
+YGI +E+ D SL+ KQ
Sbjct: 633 SYGIVVNELTGDQSLTNKQ 651
Score = 38 (18.4 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 501 ILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYL 540
I RK+ E D D +++ EK + L + P R +Q L
Sbjct: 340 IQRKISEFERDHDLSKQLAEKTLNILRQ--PNVRRCEQQL 377
Score = 38 (18.4 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 955 EEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCT 1008
+ DL L++ T LRQ L D+ +L NNK +L CT
Sbjct: 350 DHDLSKQLAEKTLNILRQPNVRRCEQQLVDLFTIDKLDFLKLIINNKQTILYCT 403
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 2786 (985.8 bits), Expect = 4.4e-290, P = 4.4e-290
Identities = 575/1502 (38%), Positives = 908/1502 (60%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAA 61
E T +R+VGLSATLPNY +VA FL V+P+ GLF+FDS+YRP PL Q++IGI+E
Sbjct: 679 EETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRPCPLKQEFIGITEKTPFK 738
Query: 62 RNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-EVFNNDTHP 120
R + +E CY+KV+ + +Q ++FVHSRK+T KTA+ + D A E + + +D
Sbjct: 739 RMQTTNEACYEKVMQHAGK-NQVLIFVHSRKETAKTARFIRDKALEEETIGHLLRSDAAS 797
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ +++ + + +++L +L +HHAGM R DR +E LF++G ++VLV TATLAW
Sbjct: 798 R-EILRAEADSTSDENLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTATLAW 856
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLG---MLDIFGRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +L +L + GRAGRPQFD GEGIIIT+H +L
Sbjct: 857 GVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAHSELQ 916
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL L+ QLPIESQF+ L D LNAEV+LGTV ++++ WLGYTYL +RM +P Y
Sbjct: 917 YYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYS 976
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+G E D L K+ L+ AA L+K K++ ++ +SG TELG++A+ +Y+ ++S
Sbjct: 977 VG-PEYDDDKYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTATELGKVAASYYVTHNS 1035
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ YN +L + + E+ + S S EF++I VR+EE+ EL L++ + P+ ++
Sbjct: 1036 MAIYNRLLMQTTSFIELFRVFSFSDEFKHIPVREEEKVELAKLLERV-PIPIRERLDEPA 1094
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI+ L+Q YISR +D F+LV+D Y++ S RIMRA+FE LRRGW ++ L+ CK
Sbjct: 1095 AKINALLQSYISRQRLDGFALVADMVYVTQSAGRIMRAIFEISLRRGWSSVATLSLDTCK 1154
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
+++++WP PLRQF P+E++R++E++ R +++ ++G L+ GR V
Sbjct: 1155 MIEKRLWPTMSPLRQFPN-CPSEVIRRVEKKEFPWQRYFDLDPAELGELVGVPKEGRRVY 1213
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
+ FP + + A V PITR+++++ L I +F W DH G ++ +WI+V+D + D + H
Sbjct: 1214 NMVQSFPRLSVEAHVQPITRSLVRVELVINSQFNWDDHLSGTSEAFWILVEDVDGDRLLH 1273
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
E F L K+ + + ++FTVP+ EP PP Y+I+ VSD WLH+ +SF L +P+
Sbjct: 1274 YEQFFLLKKY-KDDEHIVNFTVPLLEPLPPCYFIKIVSDRWLHSITKVPLSFQRLIMPEK 1332
Query: 658 RTSHTELLDLKPLPVTALGNNIYEALY-NFSHFNPIQTQIFHILYHTDNNVLLGAPTGSG 716
+ T LLDL+ PV++L N + +LY NF FN IQTQ+F+ +Y T+++V +GAP GSG
Sbjct: 1333 FPAPTPLLDLQNAPVSSLNNPSFISLYPNFKFFNKIQTQVFNSVYKTNDSVFIGAPNGSG 1392
Query: 717 KTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLG--KEMVEMTGDYT 774
KT+ AELA+LH ++ + VYIAP++ IV R +W + S LG K +V++TG+ +
Sbjct: 1393 KTVCAELALLHHWSQEDYGTAVYIAPIQEIVDRRYEEWYGKF-SDLGDGKVLVKLTGERS 1451
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSR 834
DL + AD+I TP +WD +S+ W S ++KV I DE+ LLG GP+ E+++SR
Sbjct: 1452 QDLKLIQVADLIFCTPSQWDSLSKRWRSMRSIQKVDFYICDELQLLGGFYGPLYEIVISR 1511
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
+RY++ Q E+ +R +GLS ++ANA DL +WLG +FNF P RP PL +H+Q +
Sbjct: 1512 IRYMAVQLEKNIRVVGLSVSVANARDLGEWLGTSPQCIFNFSPKDRPNPLTIHLQSFSIT 1571
Query: 895 FYCPRMNSMNKPAYAAICTH-SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGM 953
+ M +M+KP Y ++ S K ++F R+ + A DL+ F+ +DE F M
Sbjct: 1572 HFPSLMLAMSKPIYRSLKNFISQRKSTIVFTPDRKVAKQLAFDLVTFSMADEDEYLFSLM 1631
Query: 954 PEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAW 1013
E ++V D L+Q+L+ GI + D+++V+ L+ + I+VL+ + + +
Sbjct: 1632 ENE----AFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVLIASRDVIY 1687
Query: 1014 GVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKS 1073
+ ++ VI+ GT+YYDGK RY+D+PI+++LQM+G + + +++ KK
Sbjct: 1688 SLKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILMTVTTKKE 1747
Query: 1074 FYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYG 1133
+YKKFL EP P+ES L+ LHD F +EI + TI K+DAV +L+W+Y++RRL NPAYYG
Sbjct: 1748 YYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAYYG 1807
Query: 1134 LEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTVSM 1191
L+D E +S +LS LV+ T DL ++ + + + D+ L IAS Y ++Y+T+
Sbjct: 1808 LQDITHESVSEFLSDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGITYITMQT 1867
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKA 1251
F ++ T ++ L I++ A+EY++LP+R ED E + R+ + N +DPH K+
Sbjct: 1868 FALSLSERTKMKGLLEIVTSAAEYEQLPIRKYEDIVLERIHSRLPVRLSNPNYEDPHTKS 1927
Query: 1252 NLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVM 1311
+L AHFSR +LP V D K +L + ++ A +D ++ G L + I M + QMV
Sbjct: 1928 FILLAAHFSRFELP-PGLVIDQKFILTRVHNLLGACVDTLSSEGHLIACIRPMEMSQMVT 1986
Query: 1312 QGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVI--GNFPVSRLHQ 1369
Q LW ++DS L P ++ L+ G+ V ++D+ E ++ N +++ +
Sbjct: 1987 QALW-DRDSPLKQIPYFDDALIERCNKEGVHDVFDIIDLDDEKRTELLHMDNAHLAKCAE 2045
Query: 1370 DLQRFPRIQVKLRLQ-RRDIDGENSLTLNIRMDKM--NSWKNTSRAFALRFPKIKDEAWW 1426
+ ++P I + ++ D+ + L +++ + + + A FP K E WW
Sbjct: 2046 FINKYPDIDIDFEIEDSEDVHANSPSVLIVQLTRELEEDEEVDTTVIAPYFPAQKTEHWW 2105
Query: 1427 LVLGNTNTSELYALKRISFSDRLNTHME-LPSGITTFQGMKLVVVSDCYLGFEQEHSIEA 1485
LV+ + T L A+K+I+ L T ME +P + T + KL SD Y+G + E E
Sbjct: 2106 LVISDDKT--LLAIKKITLGRSLTTKMEFVPPAMGTLK-YKLSCFSDSYMGVDYEKEFEC 2162
Query: 1486 LV 1487
V
Sbjct: 2163 NV 2164
Score = 1039 (370.8 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 268/773 (34%), Positives = 413/773 (53%)
Query: 664 LLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAEL 723
L+ +K LP + ++A N N IQ+ ++ I + TD N+LL APTG+GKT A L
Sbjct: 500 LVKIKELPEWS-----HQAFLNTQSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAML 554
Query: 724 AML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY 773
+L HL FN Q+ K+VYIAPLKA+V+E +N++ RL + + E+TGD
Sbjct: 555 CILNELQKHLREDLSFNLQN-FKIVYIAPLKALVQEMVNNFSKRL-TPYNIRVAELTGDS 612
Query: 774 TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVS 833
+ II++TPEKWD I+R + +YV V L+I+DE+HLL ERGP+LE IV+
Sbjct: 613 QLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLHDERGPVLESIVA 672
Query: 834 RMRYISSQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVHIQGYP 892
R+ +T VR +GLS L N D+A +L V + GLF F + RP PL+ G
Sbjct: 673 RIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRPCPLKQEFIGIT 732
Query: 893 GKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFL- 951
K RM + N+ Y + H+ VLIFV SR++T TA + A +ET L
Sbjct: 733 EKTPFKRMQTTNEACYEKVMQHAGKNQVLIFVHSRKETAKTARFIRDKALEEETIGHLLR 792
Query: 952 --GMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
E L+ +D+NL+ L +G +HHAG+ +DR E+LFA+ IQVLV T+
Sbjct: 793 SDAASREILRAEADSTSDENLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTA 852
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
TLAWGVNLPAH VIIKGT+ Y + + + D+LQM+GRAGRPQ+D +G+ +I+
Sbjct: 853 TLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAH 912
Query: 1070 PKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINP 1129
+ +Y + + P+ES +L D NAE+ GT+ ED V +L +TYL+ R+ +P
Sbjct: 913 SELQYYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSP 972
Query: 1130 AYY--GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIASQYYLS 1185
A Y G E + + L + L+ + LE + T+ T LG +A+ YY++
Sbjct: 973 ALYSVGPEYDDDKYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTATELGKVAASYYVT 1032
Query: 1186 YVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRL 1244
+ +++++ + TS +E+F + S + E+ +PVR E L +RV + RL
Sbjct: 1033 HNSMAIYNRLLMQTTSFIELF-RVFSFSDEFKHIPVREEEKVELAKLLERVPIPI-RERL 1090
Query: 1245 DDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCM 1304
D+P K N L Q++ SR L V D+ V + RI++A+ +I GW S + +
Sbjct: 1091 DEPAAKINALLQSYISRQRLDGFALVADMVYVTQSAGRIMRAIFEISLRRGWSSVATLSL 1150
Query: 1305 HLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV 1364
+M+ + LW S L FP ++++ + + Q+ D+ L ++G P
Sbjct: 1151 DTCKMIEKRLWPTM-SPLRQFPNCPSEVIRRVEKKEFPW-QRYFDLDPAELGELVG-VPK 1207
Query: 1365 S--RLHQDLQRFPRIQVKLRLQ--RRDIDGENSLTLNIRMDKMNSWKNTSRAF 1413
R++ +Q FPR+ V+ +Q R + L +N + + + TS AF
Sbjct: 1208 EGRRVYNMVQSFPRLSVEAHVQPITRSLV-RVELVINSQFNWDDHLSGTSEAF 1259
Score = 38 (18.4 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 357 SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELE 398
+VE E+ +N+S V + + + E E V EE E
Sbjct: 213 TVEQEEELNEEGVNESGVPVLFNEADEEEEAVEAMEEDEVAE 254
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 2328 (824.6 bits), Expect = 5.6e-254, Sum P(3) = 5.6e-254
Identities = 473/1018 (46%), Positives = 670/1018 (65%)
Query: 369 MNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGP-SNKHGKISILIQLY 427
M D VI ++S S+EF N+ R+EE +LE L+ C + V+GG ++ GK+++L+Q
Sbjct: 855 MPDDMVIGLISMSTEFANLKCREEEIGDLEELMSYGCMMNVRGGGLASVAGKVNVLLQSL 914
Query: 428 ISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQ 487
ISR +L+S+ Y+ + R+ RA+FE L+ GW + + L K V++Q+W +Q
Sbjct: 915 ISRTSTRNSALMSEQLYVQQNAGRLCRAMFEMVLKNGWSQAANAFLGIAKCVEKQMWMNQ 974
Query: 488 HPLRQFDK--ELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPS 545
LRQF + +P + K+E + A L E+ KD+G + G RL YL Y P
Sbjct: 975 CALRQFIQIINIPITWIEKIERKKARESDLLELSAKDLGYMFS-CDGDRLYT-YLRYLPR 1032
Query: 546 IQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA--QRWWIIVQDSESDHIYHSELFTL 603
+ + A PIT T++++ + +TP F W D HG + Q +++++++ + I H E +
Sbjct: 1033 MDVQAKFKPITYTIVQVEVTLTPTFIWNDQIHGKSGQQSFYLVLENLNENLIIHQERIGI 1092
Query: 604 TK-RMARGETQKLSFTVPIFEPH-PPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSH 661
K ++ R ETQ L FT+PI + + +R S+ ++ + +S HN LP++ SH
Sbjct: 1093 GKMKVNRQETQNLVFTIPIVDCQLTNNFQLRLASEYFVTDDVVVPMSLHNCILPKSFKSH 1152
Query: 662 TELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISA 721
T+LLDL+PLP+ L N+ +EA+YNF +FNPIQ Q+F LY TD + L+GAPTGSGKT+ A
Sbjct: 1153 TDLLDLEPLPIKTLKNSKFEAIYNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCA 1212
Query: 722 ELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALL 781
ELAM L MKVVYIAPLK++VRER++DWK + +G +VE++GD TPD L
Sbjct: 1213 ELAMFRLLQDHPGMKVVYIAPLKSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDPEELA 1272
Query: 782 SADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQ 841
++ I+I+TPEKWDGISR+W +R YV++VGL++LDE+HLLG +RG +LE IVSR++ I+ +
Sbjct: 1273 ASSILITTPEKWDGISRSWATREYVRRVGLIVLDEVHLLGVDRGAVLEAIVSRLKMITRR 1332
Query: 842 ---TERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCP 898
TE VR +GLSTALANAGD+A+WLG+ + +NF+PSVRPVP+ VHIQG+PG+ YCP
Sbjct: 1333 SHVTEEPVRLLGLSTALANAGDVAEWLGIPDEACYNFRPSVRPVPISVHIQGFPGQHYCP 1392
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDL 958
RM MNKPAY AI T+SP KPVLIFVSSRRQTRLTAL + +D P+Q+L M +L
Sbjct: 1393 RMGLMNKPAYKAILTYSPRKPVLIFVSSRRQTRLTALAFVNLLIADHNPKQWLNMDMLEL 1452
Query: 959 QMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP 1018
+ +++ + D+NL+ TL FGIG+HHAGL+ +R++VE+LF KIQVL+ T+TLAWG+N P
Sbjct: 1453 EDLMAAIKDENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCP 1512
Query: 1019 AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF 1078
AHLVI+KGTEY+DGK +YVDFP+TD+LQMMGRAGRPQ+D AVI V + KK+FYKKF
Sbjct: 1513 AHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKKTFYKKF 1572
Query: 1079 LYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTE 1138
LYEPFPVESSL L +H NAEI +GTI K+ V YLS TYL+RRL NP YYGLE+
Sbjct: 1573 LYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYRRLFANPNYYGLEEDS 1632
Query: 1139 AEGLSSYLSRLVQNTFEDLEDSGCVKMT--EDTVEPTMLGTIASQYYLSYVTVSMFGSNI 1196
E + +++++V ++ +L S C+ + +D ++PT G IAS YYL + TV ++
Sbjct: 1633 EEAMLKFITKIVDDSVAELLASECIHVDSEQDVIKPTPCGRIASVYYLQHETVRFLVKSL 1692
Query: 1197 GPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQ 1256
S+E L IL+ EY E+PVRHNED N L +++R + + KA+LLFQ
Sbjct: 1693 HSGCSVENMLKILTDVPEYAEIPVRHNEDLINTELQKKLRIRFSTSVMGTSACKAHLLFQ 1752
Query: 1257 AHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWF 1316
AHF R LP +DY TDLKSVLDQ IRI+QAM ++ WLS+++ + L QM W
Sbjct: 1753 AHFMRTVLP-TDYRTDLKSVLDQCIRILQAMREMARLKNWLSATMNIILLQQMCHSARWH 1811
Query: 1317 EQDSALWMFPCMNNDLLGTLR-ARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQR 1373
+ D L P ++++ ++ I +Q L+I K T + + ++R Q L R
Sbjct: 1812 D-DHPLLCLPHLSHEDARSIGDGMTIPQLQNHLEIEKS---TSLDDAKLARRAQKLFR 1865
Score = 1870 (663.3 bits), Expect = 3.5e-202, Sum P(2) = 3.5e-202
Identities = 386/865 (44%), Positives = 553/865 (63%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEP-NF 59
VE +Q IRIVGLSATLPN+++VA+FLRVNP GLFFFD +RP+PL Q++IG + NF
Sbjct: 471 VEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFFFDGRFRPVPLTQKFIGTRKAGNF 530
Query: 60 AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
L+ +CY +VVD +++GHQ +VFVH+R T K + A +++F
Sbjct: 531 RDNLTLMDNVCYDEVVDFVKRGHQVLVFVHTRNGTAKLGEAFCARASVLGQMDLFLPKDR 590
Query: 120 PQLSLIKKD--VMKSRNKDLIE-LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTA 176
I+ D + RN+ I LF +G+HHAG+ R DR L ER F+EG + VL CTA
Sbjct: 591 ASSKYIQADKAINICRNRAQISPLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVLFCTA 650
Query: 177 TLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLD---IFGRAGRPQFDRSGEGIIITSH 233
TLAWGVNLPAH VVIKGT ++D + G + DLG+LD IFGRAGRPQF+ G GIIIT+
Sbjct: 651 TLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTR 710
Query: 234 DKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNP 293
DK+ YL +L Q PIESQF + L DNLNAEVALGTV+ V E WL YTY+ R NP
Sbjct: 711 DKIDKYLTMLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYTRALKNP 770
Query: 294 LAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI 353
+AYGI ++ + DP+L ++ +AA LD+ KM+RFD + T+LGRIAS+FY+
Sbjct: 771 MAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRIASNFYV 830
Query: 354 QYSSVETYNEMLR---------RHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTL 404
+Y +++ NE + M D VI ++S S+EF N+ R+EE +LE L+
Sbjct: 831 KYETIQLLNEAEKGVGLPVTFTSFMPDDMVIGLISMSTEFANLKCREEEIGDLEELMSYG 890
Query: 405 CPVEVKGGP-SNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRR 463
C + V+GG ++ GK+++L+Q ISR +L+S+ Y+ + R+ RA+FE L+
Sbjct: 891 CMMNVRGGGLASVAGKVNVLLQSLISRTSTRNSALMSEQLYVQQNAGRLCRAMFEMVLKN 950
Query: 464 GWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDK--ELPAEILRKLEERGADLDRLQEMEEK 521
GW + + L K V++Q+W +Q LRQF + +P + K+E + A L E+ K
Sbjct: 951 GWSQAANAFLGIAKCVEKQMWMNQCALRQFIQIINIPITWIEKIERKKARESDLLELSAK 1010
Query: 522 DIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAA- 580
D+G + G RL YL Y P + + A PIT T++++ + +TP F W D HG +
Sbjct: 1011 DLGYMFS-CDGDRLYT-YLRYLPRMDVQAKFKPITYTIVQVEVTLTPTFIWNDQIHGKSG 1068
Query: 581 -QRWWIIVQDSESDHIYHSELFTLTK-RMARGETQKLSFTVPIFEPH-PPQYYIRAVSDS 637
Q +++++++ + I H E + K ++ R ETQ L FT+PI + + +R S+
Sbjct: 1069 QQSFYLVLENLNENLIIHQERIGIGKMKVNRQETQNLVFTIPIVDCQLTNNFQLRLASEY 1128
Query: 638 WLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIF 697
++ + +S HN LP++ SHT+LLDL+PLP+ L N+ +EA+YNF +FNPIQ Q+F
Sbjct: 1129 FVTDDVVVPMSLHNCILPKSFKSHTDLLDLEPLPIKTLKNSKFEAIYNFDYFNPIQAQVF 1188
Query: 698 HILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDR 757
LY TD + L+GAPTGSGKT+ AELAM L MKVVYIAPLK++VRER++DWK +
Sbjct: 1189 FCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPLKSLVRERVDDWKKK 1248
Query: 758 LVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEI 817
+G +VE++GD TPD L ++ I+I+TPEKWDGISR+W +R YV++VGL++LDE+
Sbjct: 1249 FEDGMGYRVVEVSGDVTPDPEELAASSILITTPEKWDGISRSWATREYVRRVGLIVLDEV 1308
Query: 818 HLLGAERGPILEVIVSRMRYISSQT 842
HLLG +RG +LE IVSR++ I+ ++
Sbjct: 1309 HLLGVDRGAVLEAIVSRLKMITRRS 1333
Score = 739 (265.2 bits), Expect = 2.4e-67, Sum P(2) = 2.4e-67
Identities = 220/795 (27%), Positives = 376/795 (47%)
Query: 732 QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPE 791
+ D K++YIAP+KA+ E + RL + LG ++ E+TGD + +++ TPE
Sbjct: 364 KDDFKIIYIAPMKALATEMTESFGKRL-APLGLKVKELTGDTQLSRNEVADTQMLVLTPE 422
Query: 792 KWDGISRNWHSRN-YVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFI 849
KWD I+R S N + V L+I+DE+HLL ERGP++E +V+R +R + ++ +R +
Sbjct: 423 KWDVITRKSTSDNSLINVVRLLIIDEVHLLHDERGPVIETLVARTLRQVE-MSQSGIRIV 481
Query: 850 GLSTALANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGY--PGKFYCPRMNSMNKP 906
GLS L N D+A +L V GLF F RPVPL G G F + M+
Sbjct: 482 GLSATLPNFIDVARFLRVNPYKGLFFFDGRFRPVPLTQKFIGTRKAGNFR-DNLTLMDNV 540
Query: 907 AYAAICTHSPT-KPVLIFVSSRRQT---------RLTALDLIQ-FAASDETPRQFLGMPE 955
Y + VL+FV +R T R + L + F D +++ +
Sbjct: 541 CYDEVVDFVKRGHQVLVFVHTRNGTAKLGEAFCARASVLGQMDLFLPKDRASSKYI---Q 597
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
D + + + Q + Q G+G+HHAGL +DR L+E FA + VL CT+TLAWGV
Sbjct: 598 ADKAINICRNRAQ-ISPLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVLFCTATLAWGV 656
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPAH V+IKGT+ +D + + D + D+ Q+ GRAGRPQ++ G +I+ K Y
Sbjct: 657 NLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTRDKIDKY 716
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
L P+ES +LHD+ NAE+ GT+ ++ V +L++TY++ R NP YG+
Sbjct: 717 LTMLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYTRALKNPMAYGIA 776
Query: 1136 DTEAE---GLSSYLSRLVQNTFEDLEDSGCVK--MTEDTVEPTMLGTIASQYYLSYVTVS 1190
E L + +++ L+ + ++ M + + T LG IAS +Y+ Y T+
Sbjct: 777 YNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRIASNFYVKYETIQ 836
Query: 1191 MFGS---NIG-PDTSL-----EVFLHILSGASEYDELPVRHNE-DNHNEALSQRVRFAVD 1240
+ +G P T ++ + ++S ++E+ L R E + E +S V
Sbjct: 837 LLNEAEKGVGLPVTFTSFMPDDMVIGLISMSTEFANLKCREEEIGDLEELMSYGCMMNVR 896
Query: 1241 NNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSS 1300
L K N+L Q+ SR S +++ V + R+ +AM ++ +GW ++
Sbjct: 897 GGGLASVAGKVNVLLQSLISRTSTRNSALMSEQLYVQQNAGRLCRAMFEMVLKNGWSQAA 956
Query: 1301 ITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRA-RGISTVQQLLDIPKENLQTVI 1359
+ + + V + +W Q + +N + + R + LL++ ++L +
Sbjct: 957 NAFLGIAKCVEKQMWMNQCALRQFIQIINIPITWIEKIERKKARESDLLELSAKDLGYMF 1016
Query: 1360 GNFPVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPK 1419
+ RL+ L+ PR+ V+ + + I + + + + W + K
Sbjct: 1017 -SCDGDRLYTYLRYLPRMDVQAKF--KPIT-YTIVQVEVTLTPTFIWNDQIHG------K 1066
Query: 1420 IKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYL--GF 1477
++++LVL N N + + +RI E + + T + + DC L F
Sbjct: 1067 SGQQSFYLVLENLNENLIIHQERIGIGKMKVNRQETQNLVFT------IPIVDCQLTNNF 1120
Query: 1478 EQEHSIEALVEQSVI 1492
+ + E V V+
Sbjct: 1121 QLRLASEYFVTDDVV 1135
Score = 533 (192.7 bits), Expect = 4.2e-52, Sum P(2) = 4.2e-52
Identities = 148/498 (29%), Positives = 247/498 (49%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARN 63
T+ +R++GLS L N +VA++L + P+ + F S RP+P++ G ++ R
Sbjct: 1336 TEEPVRLLGLSTALANAGDVAEWLGI-PDEACYNFRPSVRPVPISVHIQGFPGQHYCPRM 1394
Query: 64 ELLSEICYKKVVD-SLRQGHQAMVFVHSRKDTVKTAQKLVDLA-RRYEDLEVFNNDTHPQ 121
L+++ YK ++ S R+ ++FV SR+ T TA V+L + + N D
Sbjct: 1395 GLMNKPAYKAILTYSPRK--PVLIFVSSRRQTRLTALAFVNLLIADHNPKQWLNMDMLEL 1452
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWG 181
L+ +K N L FG +G+HHAG+ +R + E+LF E ++VL+ TATLAWG
Sbjct: 1453 EDLMA--AIKDENLKLTLPFG--IGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLAWG 1508
Query: 182 VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAY 238
+N PAH V++KGT+ +D K G + D + D+ GRAGRPQFD S +I K +
Sbjct: 1509 INCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKKTF 1568
Query: 239 YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
Y + L P+ES + L +++NAE++ GT+ + + +L TYL R+ NP YG+
Sbjct: 1569 YKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYRRLFANPNYYGL 1628
Query: 299 GWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV 358
D A K +V D+ L ++ + D + T GRIAS +Y+Q+ +V
Sbjct: 1629 EEDSEEAMLKFITK---IVDDSVAELLASECIHVDSEQDVIKPTPCGRIASVYYLQHETV 1685
Query: 359 ETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQ---NELETLVQTLCPVEVKGGPSN 415
+ L + ++++++ E+ I VR E EL+ ++ V G +
Sbjct: 1686 RFLVKSLHSGCSVENMLKILTDVPEYAEIPVRHNEDLINTELQKKLRIRFSTSVMGTSAC 1745
Query: 416 KHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCE--MSLFML 473
K +L Q + R + T +D + RI++A+ E + W M++ +L
Sbjct: 1746 K---AHLLFQAHFMRTVLPT-DYRTDLKSVLDQCIRILQAMREMARLKNWLSATMNIILL 1801
Query: 474 EY-CKAVDRQIWPHQHPL 490
+ C + W HPL
Sbjct: 1802 QQMCHSAR---WHDDHPL 1816
Score = 339 (124.4 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 93/260 (35%), Positives = 138/260 (53%)
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLF----NTQSDM-----K 736
F N IQ+ +F Y T N+L+ APTG+GKT A L +L+ N++ D+ K
Sbjct: 309 FEKLNVIQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFK 368
Query: 737 VVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGI 796
++YIAP+KA+ E + RL + LG ++ E+TGD + +++ TPEKWD I
Sbjct: 369 IIYIAPMKALATEMTESFGKRL-APLGLKVKELTGDTQLSRNEVADTQMLVLTPEKWDVI 427
Query: 797 SRNWHSRN-YVKKVGLMILDEIHLLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTA 854
+R S N + V L+I+DE+HLL ERGP++E +V+R +R + ++ +R +GLS
Sbjct: 428 TRKSTSDNSLINVVRLLIIDEVHLLHDERGPVIETLVARTLRQVE-MSQSGIRIVGLSAT 486
Query: 855 LANAGDLADWLGVGEI-GLFNFKPSVRPVPLEVHIQGY--PGKFYCPRMNSMNKPAYAAI 911
L N D+A +L V GLF F RPVPL G G F + M+ Y +
Sbjct: 487 LPNFIDVARFLRVNPYKGLFFFDGRFRPVPLTQKFIGTRKAGNFR-DNLTLMDNVCYDEV 545
Query: 912 CTHSPT-KPVLIFVSSRRQT 930
VL+FV +R T
Sbjct: 546 VDFVKRGHQVLVFVHTRNGT 565
Score = 109 (43.4 bits), Expect = 5.6e-254, Sum P(3) = 5.6e-254
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 1396 LNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRI--SFSDRLNTHM 1453
L I M+++ KN S ++PK K W +V+GN + + + S S R +
Sbjct: 1922 LRIVMERVGPGKNNSSMHLPQWPKPKQAGWIIVVGNVSADMILNTTTVTGSHSTRSTAKL 1981
Query: 1454 ELPSGITTFQG-MKLVVVSDCYLGFEQEHSI 1483
++ + T + ++++SDCYLG +QE+++
Sbjct: 1982 DIRAPATKGNHELAVLILSDCYLGIDQEYTL 2012
Score = 49 (22.3 bits), Expect = 5.6e-254, Sum P(3) = 5.6e-254
Identities = 26/101 (25%), Positives = 51/101 (50%)
Query: 314 RALVTDAARALDK--AKM-MRFDEKSGNFYCTELGRI-ASHFYIQYSSVETYNEMLRRHM 369
+AL T+ + K A + ++ E +G+ T+L R + + + E ++ + R+
Sbjct: 376 KALATEMTESFGKRLAPLGLKVKELTGD---TQLSRNEVADTQMLVLTPEKWDVITRKST 432
Query: 370 NDSEVIEMVSHSSEFENIVVRDEEQNELETLV-QTLCPVEV 409
+D+ +I +V E ++ DE +ETLV +TL VE+
Sbjct: 433 SDNSLINVVRLLIIDEVHLLHDERGPVIETLVARTLRQVEM 473
Score = 42 (19.8 bits), Expect = 2.4e-67, Sum P(2) = 2.4e-67
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 753 DWKDRLVSQLGKEMVEMTGD 772
D + L+ LG E+ E+ GD
Sbjct: 104 DLQGELIDLLGVELFELAGD 123
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 1602 (569.0 bits), Expect = 2.4e-234, Sum P(2) = 2.4e-234
Identities = 326/885 (36%), Positives = 535/885 (60%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAA 61
E+T IRIVGLSATLPNY +VA+F+R PE GLF+FD+SYRP PL Q YIG+ E
Sbjct: 531 ETTGSDIRIVGLSATLPNYADVAKFIRAKPE-GLFYFDASYRPCPLEQVYIGVKEQKAIK 589
Query: 62 RNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ 121
R ++E CY ++ SL+ HQ ++FVHSRK+T TA+ L++ D+++ + +
Sbjct: 590 RIAAMNEACYDRMHQSLQDRHQLIIFVHSRKETFTTAKYLMEKL----DIDIVEQEGVKE 645
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWG 181
+ +K++ N L E+ G+HHAG+ + DRG+ E LF++G L+VLV TATLAWG
Sbjct: 646 I--LKQEGESMSNPKLKEVIPRGFGIHHAGLTKKDRGVVEDLFAQGYLRVLVSTATLAWG 703
Query: 182 VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAY 238
VNLPAHTV+IKGT+ Y P++G W L DI GRAGRP++D++GEGIIITS D++ Y
Sbjct: 704 VNLPAHTVIIKGTETYSPESGAWVQLSPQDILQMLGRAGRPRYDKNGEGIIITSQDEVQY 763
Query: 239 YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
YL +L QLPIESQ I L DN+NAE+ G++T ++E WL YTY +RM +P YG+
Sbjct: 764 YLAILNQQLPIESQLIHKLVDNINAEIVAGSITTIEEGIEWLTYTYFFVRMLQSPALYGV 823
Query: 299 -GWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+ DP+L ++ L+ A L + K++ ++ G+ TELG+IASHFYI + +
Sbjct: 824 EATYDFTNDPTLYNRRADLIYTAFCILHENKLVVYNAALGSVASTELGKIASHFYINFET 883
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
+ Y +ML+ ++++++ + S+S EF+ + VR EE+ E+ L++ CP+ +K P+
Sbjct: 884 INLYGKMLKPWHSETDILSVFSNSGEFKYVPVRQEERLEISKLMEK-CPIPIKEQPNEPL 942
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCK 477
KI+IL+Q +ISR ++ ++L++D YI+ S R++RAL+E L + W ++ +L CK
Sbjct: 943 AKINILLQTFISRLSLEGYALIADMIYITQSAGRLLRALYEIALLQKWSSLAKSILNLCK 1002
Query: 478 AVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVK 537
VD+++W + PLRQF +P +I+R E R + ++ + ++ K
Sbjct: 1003 MVDKRLWLNNSPLRQFGDVVPHQIIRASEMSHLPWIRYFHLNPDELAVALNLKGNAQIAK 1062
Query: 538 QYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYH 597
QY+ FP + + V PIT L+I + + PE++W HG+ + + + ++ + + + H
Sbjct: 1063 QYIDSFPKVSIQYMVQPITEQFLRIQVEVIPEWSWISAIHGSQEIFNVFLEGCDGNKLLH 1122
Query: 598 SELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQA 657
SE F + KR + L F VP P P Y + VS+ W+H I ++ P+
Sbjct: 1123 SEQF-IVKRKNINKPHILEFFVPFVAPPLPNYILSFVSEKWVHCTWKSSILLSDVISPKV 1181
Query: 658 RTSHTEL-LDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSG 716
+ + +DL +P +G+ L+ F+HFN +Q+ F +Y+++NNV +G+ G G
Sbjct: 1182 SPHYLDNNVDL--VPTETVGD-----LFPFTHFNKLQSSTFDTVYNSENNVFIGSSKGDG 1234
Query: 717 KTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPD 776
KT+ AELA+L+ +N + ++VYI P + +V + W S KE+ ++G+ D
Sbjct: 1235 KTVLAELAILNHWNNKKG-RIVYINPCQELVDKLFKKWST-FFSSYEKEINVLSGNLRED 1292
Query: 777 LMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMR 836
++ + +I++TPE+++ +S+ W +R + + L I D++HL+G++ E++V+R+R
Sbjct: 1293 SASVNQSHLILATPEQFNCLSKRWKTRKAFRSIDLFIWDDLHLVGSDVH--YEMLVTRVR 1350
Query: 837 YISSQ-TERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVR 880
++SQ + +R + LS+ + N+ D+A+W+GV + FNF P R
Sbjct: 1351 MLTSQWDDYKLRIVALSSPVLNSRDIAEWIGVAKSETFNFAPHSR 1395
Score = 1017 (363.1 bits), Expect = 2.9e-98, Sum P(2) = 2.9e-98
Identities = 263/760 (34%), Positives = 424/760 (55%)
Query: 648 SFHNLALPQARTSHTELLDLKPLPVTALGNNIYEAL--YNFSHFNPIQTQIFHILYHTDN 705
S+ + +P S ++ +L LP++ L + EA + FN IQ++I++ + TDN
Sbjct: 333 SYDTITVPAPAQSLSDNDEL--LPISTLPDWAQEAFPKTETTTFNRIQSKIYNQAFETDN 390
Query: 706 NVLLGAPTGSGKTISAELAMLHLF-NTQSD-------MKVVYIAPLKAIVRERMNDWKDR 757
N+L+ APTG+GKT A L +L N +++ K+VYIAPLKA+V+E+M +++ R
Sbjct: 391 NLLICAPTGAGKTNVAMLTILRTIENFRNNGHIQLKNFKIVYIAPLKALVQEQMREFQRR 450
Query: 758 LVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEI 817
L S G + E+TGD + + II++TPEKWD I+R +YVK V LMI+DEI
Sbjct: 451 LTSVYGVVVNELTGDSSLSKQQIAETQIIVTTPEKWDIITRK--DPSYVKLVKLMIIDEI 508
Query: 818 HLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP 877
HLL ERGP+LE +VSR S T +R +GLS L N D+A ++ GLF F
Sbjct: 509 HLLHDERGPVLESLVSRAIRKSETTGSDIRIVGLSATLPNYADVAKFIRAKPEGLFYFDA 568
Query: 878 SVRPVPLE-VHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTK-PVLIFVSSRRQTRLTAL 935
S RP PLE V+I G + R+ +MN+ Y + + ++IFV SR++T TA
Sbjct: 569 SYRPCPLEQVYI-GVKEQKAIKRIAAMNEACYDRMHQSLQDRHQLIIFVHSRKETFTTAK 627
Query: 936 DLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEE 995
L++ D ++ G+ +E L+ +++ L++ + G G+HHAGL KDR +VE+
Sbjct: 628 YLMEKLDIDIVEQE--GV-KEILKQEGESMSNPKLKEVIPRGFGIHHAGLTKKDRGVVED 684
Query: 996 LFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRP 1055
LFA ++VLV T+TLAWGVNLPAH VIIKGTE Y ++ +V DILQM+GRAGRP
Sbjct: 685 LFAQGYLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGAWVQLSPQDILQMLGRAGRP 744
Query: 1056 QYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHY 1115
+YD++G+ +I+ + + +Y L + P+ES L +L D+ NAEIV+G+I E+ + +
Sbjct: 745 RYDKNGEGIIITSQDEVQYYLAILNQQLPIESQLIHKLVDNINAEIVAGSITTIEEGIEW 804
Query: 1116 LSWTYLFRRLAINPAYYGLEDTE--AEGLSSYLSR--LVQNTFEDLEDSGCVKMTE--DT 1169
L++TY F R+ +PA YG+E T + Y R L+ F L ++ V +
Sbjct: 805 LTYTYFFVRMLQSPALYGVEATYDFTNDPTLYNRRADLIYTAFCILHENKLVVYNAALGS 864
Query: 1170 VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNE 1229
V T LG IAS +Y+++ T++++G + P S L + S + E+ +PVR E
Sbjct: 865 VASTELGKIASHFYINFETINLYGKMLKPWHSETDILSVFSNSGEFKYVPVRQEERLEIS 924
Query: 1230 ALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMID 1289
L ++ + + ++P K N+L Q SRL L + D+ + + R+++A+ +
Sbjct: 925 KLMEKCPIPI-KEQPNEPLAKINILLQTFISRLSLEGYALIADMIYITQSAGRLLRALYE 983
Query: 1290 ICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL-- 1347
I W S + + ++L +MV + LW +S L F + + +RA +S + +
Sbjct: 984 IALLQKWSSLAKSILNLCKMVDKRLWLN-NSPLRQFGDVVPHQI--IRASEMSHLPWIRY 1040
Query: 1348 LDIPKENLQTVI---GNFPVSRLHQDLQRFPRIQVKLRLQ 1384
+ + L + GN +++ Q + FP++ ++ +Q
Sbjct: 1041 FHLNPDELAVALNLKGNAQIAK--QYIDSFPKVSIQYMVQ 1078
Score = 681 (244.8 bits), Expect = 2.4e-234, Sum P(2) = 2.4e-234
Identities = 182/663 (27%), Positives = 327/663 (49%)
Query: 829 EVIVSRMRYISSQ-TERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVH 887
E++V+R+R ++SQ + +R + LS+ + N+ D+A+W+GV + FNF P R E
Sbjct: 1343 EMLVTRVRMLTSQWDDYKLRIVALSSPVLNSRDIAEWIGVAKSETFNFAPHSR----ENR 1398
Query: 888 IQGYPGKFYCPRMNSMNKPAYAAIC-THSPTKPVLIFVSSRRQTRLTALDLIQFAASDET 946
I K ++ K Y + +S + LIF S + A ++ +
Sbjct: 1399 ITEI--KLSVESSDNTVK-IYKDLAKVNSGLRNTLIFAPSY----IHAFEMAHSMVENNQ 1451
Query: 947 PRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLV 1006
+++ + L+ +S++ + L+ L GI + ++G+ DR +VE LF + I VL
Sbjct: 1452 AQEWRSVDLLKLEKYISKIQNPLLKNLLPKGIAVFYSGMARVDRLIVERLFESKSIGVLF 1511
Query: 1007 CT-STLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAV- 1064
CT T + A+ V + GT YDG R++D+P+ D+ +M+G Q G V
Sbjct: 1512 CTMDTSKFAPT--ANNVFVAGTRVYDGHEHRFLDYPLNDLYEMVGCC------QDGGVVH 1563
Query: 1065 ILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRR 1124
I FY FL VES L + LH+ F + +G I +++ + L++T+ +RR
Sbjct: 1564 IYTTSQMVEFYSSFLNSGLAVESLLSNSLHEFFMDAVANGIIKQRQNCIDVLTFTFFYRR 1623
Query: 1125 LAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQY 1182
L NP++Y L++ G+S+YLS L+++ F+D ++ + DT+ P IAS Y
Sbjct: 1624 LLKNPSFYDLKEVSNSGISTYLSELIESVFDDFNKEEFIEEEDEGDTISPLNKIVIASHY 1683
Query: 1183 YLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNN 1242
++ TVS S + + L+ H L+ A+E+ +LPVR ED L ++ +
Sbjct: 1684 NSTFETVSNL-SKLSNKSKLKDIFHALTNATEFSDLPVREGEDALLIKLQTKLPIKYSQD 1742
Query: 1243 RLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSIT 1302
+ P KA +L QAH SR+ +P D D KSVL + ++I+ A IDI ++ G L+ +
Sbjct: 1743 DYESPFFKAFILLQAHISRISIPF-DLRQDQKSVLTRVLQILNAAIDILSSDGSLNV-LL 1800
Query: 1303 CMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNF 1362
M L QM++Q +W D+ L P N++L + TV ++ + E ++
Sbjct: 1801 AMDLSQMIVQAVW-SSDNPLRQVPRFTNEILARCTQHNVETVYDIMSLEDEERNEIL-QL 1858
Query: 1363 PVSRLHQD---LQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPK 1419
P L++ + +P I++ + + + S + + +D+ ++ FP
Sbjct: 1859 PDQELNEVASFVNSYPNIELSYEM-KGGVTSNESKFVTVTIDRDEEIESLEVVKNENFPV 1917
Query: 1420 IKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVV--VSDCYLGF 1477
K E WW+V+G++ T LY +K+++ +++ E+ I +L + + D YL
Sbjct: 1918 TKQENWWIVVGDSKTRHLYGIKKVNIQ-KISQSFEIEFTIPNKGKHELTIYLICDSYLDA 1976
Query: 1478 EQE 1480
++E
Sbjct: 1977 DKE 1979
Score = 325 (119.5 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 154/653 (23%), Positives = 288/653 (44%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLS 67
+RIV LS+ + N ++A+++ V + F F R + + + + + + +
Sbjct: 1361 LRIVALSSPVLNSRDIAEWIGV-AKSETFNFAPHSRENRITEIKLSVESSDNTVK--IYK 1417
Query: 68 EICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKK 127
++ KV LR ++F S + A +V+ + E V L ++K
Sbjct: 1418 DLA--KVNSGLRN---TLIFAPSYIHAFEMAHSMVENNQAQEWRSV-------DLLKLEK 1465
Query: 128 DVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAH 187
+ K +N L L + V ++GM R DR + ERLF + VL CT + A+
Sbjct: 1466 YISKIQNPLLKNLLPKGIAVFYSGMARVDRLIVERLFESKSIGVLFCTMDTSKFAPT-AN 1524
Query: 188 TVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL 247
V + GT++YD + D + D++ G Q D G I T+ + +Y L S L
Sbjct: 1525 NVFVAGTRVYDGHEHRFLDYPLNDLYEMVGCCQ-D-GGVVHIYTTSQMVEFYSSFLNSGL 1582
Query: 248 PIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADP 307
+ES +SL + VA G + + L +T+ R+ NP Y + + +++
Sbjct: 1583 AVESLLSNSLHEFFMDAVANGIIKQRQNCIDVLTFTFFYRRLLKNPSFYDL---KEVSNS 1639
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRI--ASHFYIQYSSVETYNEML 365
+S L+ +K + + +E G+ + L +I ASH+ + +V +++
Sbjct: 1640 GISTYLSELIESVFDDFNKEEFIE-EEDEGDTI-SPLNKIVIASHYNSTFETVSNLSKLS 1697
Query: 366 RRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGP-SNKHGKISILI 424
+ ++ +++++EF ++ VR+ E L L QT P++ + K IL+
Sbjct: 1698 NKSKL-KDIFHALTNATEFSDLPVREGEDALLIKL-QTKLPIKYSQDDYESPFFKAFILL 1755
Query: 425 QLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIW 484
Q +ISR I F L D + + +I+ A + G + L M + + + + +W
Sbjct: 1756 QAHISRISIP-FDLRQDQKSVLTRVLQILNAAIDILSSDGSLNVLLAM-DLSQMIVQAVW 1813
Query: 485 PHQHPLRQ---FDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRL--VKQY 539
+PLRQ F E+ A + E D+ L++ E +I L P L V +
Sbjct: 1814 SSDNPLRQVPRFTNEILARCTQHNVETVYDIMSLEDEERNEILQL----PDQELNEVASF 1869
Query: 540 LGYFPSIQLSATVSP-ITRTVLK-IGLAI-------TPEFTWKDHFHGAAQR-WWIIVQD 589
+ +P+I+LS + +T K + + I + E ++F Q WWI+V D
Sbjct: 1870 VNSYPNIELSYEMKGGVTSNESKFVTVTIDRDEEIESLEVVKNENFPVTKQENWWIVVGD 1929
Query: 590 SESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAE 642
S++ H+Y + + K ++ ++ FT+P H Y+ + DS+L A+
Sbjct: 1930 SKTRHLYGIKKVNIQKI---SQSFEIEFTIPNKGKHELTIYL--ICDSYLDAD 1977
Score = 41 (19.5 bits), Expect = 2.9e-98, Sum P(2) = 2.9e-98
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 350 HFYIQYS-SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVE 408
H I S S+E+ + ++ D E + + +SS+ E + E + E E+ +T +
Sbjct: 121 HELINLSNSIESAKQNHQQGNGDDEFVAIDFNSSDDEEQAIEAEIEVEDESDKET----D 176
Query: 409 VKGGPSNKHGK 419
+ SN+H K
Sbjct: 177 TEEPTSNEHPK 187
Score = 38 (18.4 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 296 YGIGWDEVIADPSLSLKQRA 315
YG+ +E+ D SLS +Q A
Sbjct: 455 YGVVVNELTGDSSLSKQQIA 474
Score = 38 (18.4 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 363 EMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQN 395
E+L ++D ++ E+++ S+ E+ ++ N
Sbjct: 109 ELLNASISDDDLHELINLSNSIESAKQNHQQGN 141
>SGD|S000000974 [details] [associations]
symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
conformational change to release U4 (or U4atac) and U1 (or U11)"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
GO:GO:0000388 Uniprot:P32639
Length = 2163
Score = 2008 (711.9 bits), Expect = 1.2e-207, P = 1.2e-207
Identities = 431/1225 (35%), Positives = 708/1225 (57%)
Query: 5 QRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
Q RI+GLSATLPNY +V +FLRV P+ GLF+FDSS+RP PL+QQ+ GI E N + +
Sbjct: 662 QEYPRIIGLSATLPNYEDVGRFLRV-PKEGLFYFDSSFRPCPLSQQFCGIKERNSLKKLK 720
Query: 65 LLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVD-LARRYEDLEVFNNDTHPQLS 123
+++ CY+KV++S+ +G+Q +VFVHSRK+T +TA L + A ++ ND +
Sbjct: 721 AMNDACYEKVLESINEGNQIIVFVHSRKETSRTATWLKNKFAEENITHKLTKNDAGSK-Q 779
Query: 124 LIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVN 183
++K + + L +L +G HHAG+ RSDR L+E LF++GLL+VLVCTATLAWGVN
Sbjct: 780 ILKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVN 839
Query: 184 LPAHTVVIKGTQLYDPKAGGWRDLG---MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL 240
LPAHTV+IKGT +Y P+ G W L +L + GRAGRP++D GEGIIIT + YYL
Sbjct: 840 LPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYL 899
Query: 241 RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGW 300
+L QLPIESQF+S L DNLNAEV G + +A WL YTYL +RM +P+ Y +
Sbjct: 900 SVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKV-- 957
Query: 301 DEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET 360
++ +D L + +LV A L + +++ +D ++ T+LG IAS FYI ++S++
Sbjct: 958 PDISSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFYINHASMDV 1017
Query: 361 YNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKI 420
YN L H ++ + S S EF+ + VR EE+ EL+ L++ P+ ++ + K+
Sbjct: 1018 YNRELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRELKQLLEK-APIPIREDIDDPLAKV 1076
Query: 421 SILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVD 480
++L+Q Y S+ + F+L SD +I + R++RA+FE CL+RGW + +L CK+
Sbjct: 1077 NVLLQSYFSQLKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNLCKSAT 1136
Query: 481 RQIWPHQHPLRQFDKELPAEILRKLEERGADL-DRLQEMEEKDIGALIRYTPGGRLVKQY 539
++WP PLRQF K P E++++LE D LQ ++G IR G+ V
Sbjct: 1137 TKMWPTNCPLRQF-KTCPVEVIKRLEASTVPWGDYLQLETPAEVGRAIRSEKYGKQVYDL 1195
Query: 540 LGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSE 599
L FP + ++ PITR+V++ + I ++ W + HG+ + + ++++D++ D I + +
Sbjct: 1196 LKRFPKMSVTCNAQPITRSVMRFNIEIIADWIWDMNVHGSLEPFLLMLEDTDGDSILYYD 1255
Query: 600 LFTLTKRMARGETQKLSFTVPIFEPH----PPQYYIRAVSDSWLHAEAFYCISFHNLALP 655
+ +T + G LSFT + + + PP +++ +S++W H+E +SF+ LP
Sbjct: 1256 VLFITPDIV-GHEFTLSFTYELKQHNQNNLPPNFFLTLISENWWHSEFEIPVSFNGFKLP 1314
Query: 656 QARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGS 715
+ T LL+ + + LGN+ + ++ F FN IQ+Q+F LY+++++V +G+ G+
Sbjct: 1315 KKFPPPTPLLENISISTSELGNDDFSEVFEFKTFNKIQSQVFESLYNSNDSVFVGSGKGT 1374
Query: 716 GKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTG-DYT 774
GKT AELA+L+ + Q+ + VYI P + ++DW R G +++ G D +
Sbjct: 1375 GKTAMAELALLNHWR-QNKGRAVYINPSGEKIDFLLSDWNKRFSHLAGGKIINKLGNDPS 1433
Query: 775 PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIVS 833
+L L + ++++TP +++ +SR W R ++ + LMI D+ H + G + E ++S
Sbjct: 1434 LNLKLLAKSHVLLATPVQFELLSRRWRQRKNIQSLELMIYDDAHEISQGVYGAVYETLIS 1493
Query: 834 RMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPG 893
RM +I++Q E+ +RF+ LS LANA D +W G+ + ++NF PS R PLE++IQ +
Sbjct: 1494 RMIFIATQLEKKIRFVCLSNCLANARDFGEWAGMTKSNIYNFSPSERIEPLEINIQSFKD 1553
Query: 894 KFYCPRMNSMNKPAYAAICTHSPTK-PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
+ SM + A+ A + + +F+ SR+ A ++F+ + E L
Sbjct: 1554 VEHISFNFSMLQMAFEASAAAAGNRNSSSVFLPSRKDCMEVASAFMKFSKAIEW--DMLN 1611
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
+ EE + + ++TD +LR L+ G+G+ + G+ D +V+ L+ + VL+ + +
Sbjct: 1612 VEEEQIVPYIEKLTDGHLRAPLKHGVGILYKGMASNDERIVKRLYEYGAVSVLLISKDCS 1671
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
VII GT YDG +Y+ + I ++L+M+G A GK +IL K
Sbjct: 1672 -AFACKTDEVIILGTNLYDGAEHKYMPYTINELLEMVGLASGND-SMAGKVLILTSHNMK 1729
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
++YKKFL EP P ES L+ +HD N EI + I K+D V + +++Y +RR+ +NP+YY
Sbjct: 1730 AYYKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYY 1789
Query: 1133 GLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTML---GTIASQYYLSYVTV 1189
G+ DT G+S +LS LV+ DL +S +++ + E T G + +S ++
Sbjct: 1790 GVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSN 1849
Query: 1190 SMFGSNIGPDT-SLEVFLHILSGAS 1213
+ S+ G +++ F+ LS S
Sbjct: 1850 GLIASHYGVSFFTIQSFVSSLSNTS 1874
Score = 1030 (367.6 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 251/743 (33%), Positives = 411/743 (55%)
Query: 664 LLDLKPLPVTALGNNIYEALYNF--SHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISA 721
++D + +T+L + EA + + NPIQ+++FH + D+N+L+ APTGSGKT A
Sbjct: 472 VIDYELKEITSLPDWCQEAFPSSETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIA 531
Query: 722 ELAML----HLFNTQ------SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTG 771
L +L H +N + S K+VYIAPLKA+V+E++ +++ RL LG ++ E+TG
Sbjct: 532 LLTVLKALSHHYNPKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAF-LGIKVAELTG 590
Query: 772 DYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVI 831
D + +++STPEKWD +RN ++ V+ V L+I+DEIHLL +RGP+LE I
Sbjct: 591 DSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESI 650
Query: 832 VSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGY 891
V+R + S + R IGLS L N D+ +L V + GLF F S RP PL G
Sbjct: 651 VARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLSQQFCGI 710
Query: 892 PGKFYCPRMNSMNKPAYAAICTH-SPTKPVLIFVSSRRQTRLTALDLI-QFAASDET--- 946
+ ++ +MN Y + + +++FV SR++T TA L +FA + T
Sbjct: 711 KERNSLKKLKAMNDACYEKVLESINEGNQIIVFVHSRKETSRTATWLKNKFAEENITHKL 770
Query: 947 PRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLV 1006
+ G ++ L+ + V D +LR+ ++ GIG HHAGL DRSL E+LFA+ +QVLV
Sbjct: 771 TKNDAGS-KQILKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLV 829
Query: 1007 CTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVIL 1066
CT+TLAWGVNLPAH VIIKGT+ Y + + D+LQM+GRAGRP+YD G+ +I+
Sbjct: 830 CTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIII 889
Query: 1067 VHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLA 1126
+ +Y L + P+ES +L D+ NAE+V+G I + DAV++L++TYL+ R+
Sbjct: 890 TDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRML 949
Query: 1127 INPAYYGLEDTEAEG-LSSYLSRLVQNTFEDLEDSGCV--KMTEDTVEPTMLGTIASQYY 1183
+P Y + D ++G L + LV + L++ V D +E T LG IAS +Y
Sbjct: 950 ASPMLYKVPDISSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFY 1009
Query: 1184 LSYVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNN 1242
+++ ++ ++ + T+ +++F I S + E+ + VR+ E + L ++ + +
Sbjct: 1010 INHASMDVYNRELDEHTTQIDLF-RIFSMSEEFKYVSVRYEEKRELKQLLEKAPIPIRED 1068
Query: 1243 RLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSIT 1302
+DDP K N+L Q++FS+L +D+ + + R+++AM +IC GW +
Sbjct: 1069 -IDDPLAKVNVLLQSYFSQLKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRM 1127
Query: 1303 CMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQL-LDIPKENLQTVIGN 1361
++L + +W + L F +++ L A + L L+ P E + +
Sbjct: 1128 LLNLCKSATTKMW-PTNCPLRQFKTCPVEVIKRLEASTVPWGDYLQLETPAEVGRAIRSE 1186
Query: 1362 FPVSRLHQDLQRFPRIQVKLRLQ 1384
+++ L+RFP++ V Q
Sbjct: 1187 KYGKQVYDLLKRFPKMSVTCNAQ 1209
Score = 905 (323.6 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 241/895 (26%), Positives = 460/895 (51%)
Query: 626 PPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYN 685
PP +++ +S++W H+E +SF+ LP+ T LL+ + + LGN+ + ++
Sbjct: 1285 PPNFFLTLISENWWHSEFEIPVSFNGFKLPKKFPPPTPLLENISISTSELGNDDFSEVFE 1344
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKA 745
F FN IQ+Q+F LY+++++V +G+ G+GKT AELA+L+ + Q+ + VYI P
Sbjct: 1345 FKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLNHWR-QNKGRAVYINPSGE 1403
Query: 746 IVRERMNDWKDRLVSQLGKEMVEMTG-DYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
+ ++DW R G +++ G D + +L L + ++++TP +++ +SR W R
Sbjct: 1404 KIDFLLSDWNKRFSHLAGGKIINKLGNDPSLNLKLLAKSHVLLATPVQFELLSRRWRQRK 1463
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLAD 863
++ + LMI D+ H + G + E ++SRM +I++Q E+ +RF+ LS LANA D +
Sbjct: 1464 NIQSLELMIYDDAHEISQGVYGAVYETLISRMIFIATQLEKKIRFVCLSNCLANARDFGE 1523
Query: 864 WLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTK-PVLI 922
W G+ + ++NF PS R PLE++IQ + + SM + A+ A + + +
Sbjct: 1524 WAGMTKSNIYNFSPSERIEPLEINIQSFKDVEHISFNFSMLQMAFEASAAAAGNRNSSSV 1583
Query: 923 FVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHH 982
F+ SR+ A ++F+ + E L + EE + + ++TD +LR L+ G+G+ +
Sbjct: 1584 FLPSRKDCMEVASAFMKFSKAIEW--DMLNVEEEQIVPYIEKLTDGHLRAPLKHGVGILY 1641
Query: 983 AGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPI 1042
G+ D +V+ L+ + VL+ + + VII GT YDG +Y+ + I
Sbjct: 1642 KGMASNDERIVKRLYEYGAVSVLLISKDCS-AFACKTDEVIILGTNLYDGAEHKYMPYTI 1700
Query: 1043 TDILQMMGRAGRPQYDQHGKAVILVHEPK---KSFYKKFLYEPFPVESSLRDQLHDHFNA 1099
++L+M+G A ++ H K K F + L ++ + D L++
Sbjct: 1701 NELLEMVGLASGNDSMAGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNEIAN 1760
Query: 1100 EIVSG--------TIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQ 1151
I+ T + +H Y R + P +G+ + + + L+ LV+
Sbjct: 1761 SIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTS--P--HGISVFLSNLVETCLNDLVE 1816
Query: 1152 NTFEDLEDSGCVKMTE---------DTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSL 1202
++F +++D+ E + + G IAS Y +S+ T+ F S++ ++L
Sbjct: 1817 SSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSFFTIQSFVSSLSNTSTL 1876
Query: 1203 EVFLHILSGASEYDELPVRHNEDNHNEALSQRV--RFAVDNNRLDDPHVKANLLFQAHFS 1260
+ L++LS A E++ +P+R + LS+R+ RF ++ K LL QA+FS
Sbjct: 1877 KNMLYVLSTAVEFESVPLRKGDRALLVKLSKRLPLRFP-EHTSSGSVSFKVFLLLQAYFS 1935
Query: 1261 RLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDS 1320
RL+LP+ D+ DLK +L++ + +I ++DI + +G+L+++ T M L QM++QG+W + D+
Sbjct: 1936 RLELPV-DFQNDLKDILEKVVPLINVVVDILSANGYLNAT-TAMDLAQMLIQGVW-DVDN 1992
Query: 1321 ALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIG--NFPVSRLHQDLQRFPRIQ 1378
L P NN +L + + TV ++ + E ++ + ++++ + +P ++
Sbjct: 1993 PLRQIPHFNNKILEKCKEINVETVYDIMALEDEERDEILTLTDSQLAQVAAFVNNYPNVE 2052
Query: 1379 VKLRLQRRD--IDG-ENSLTLNIRMD-KMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNT 1434
+ L D I G + +T+ + D + + + TS ++P K E+WWLVLG +
Sbjct: 2053 LTYSLNNSDSLISGVKQKITIQLTRDVEPENLQVTSE----KYPFDKLESWWLVLGEVSK 2108
Query: 1435 SELYALKRISFSDRLNTH-MELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVE 1488
ELYA+K+++ + + +E + + + + V D YL ++E S E V+
Sbjct: 2109 KELYAIKKVTLNKETQQYELEFDTPTSGKHNLTIWCVCDSYLDADKELSFEINVK 2163
Score = 329 (120.9 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 145/672 (21%), Positives = 289/672 (43%)
Query: 5 QRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
++ IR V LS L N + ++ + + ++ F S R PL + + N
Sbjct: 1503 EKKIRFVCLSNCLANARDFGEWAGMT-KSNIYNFSPSERIEPLEINIQSFKDVEHISFNF 1561
Query: 65 LLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYE-D-LEVFNNDTHPQL 122
+ ++ ++ + + + VF+ SRKD ++ A + ++ E D L V P +
Sbjct: 1562 SMLQMAFEASAAAAGNRNSSSVFLPSRKDCMEVASAFMKFSKAIEWDMLNVEEEQIVPYI 1621
Query: 123 SLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV 182
+ +++ K VG+ + GM +D + +RL+ G + VL+ + +
Sbjct: 1622 EKLTDGHLRAPLKH-------GVGILYKGMASNDERIVKRLYEYGAVSVLLISKDCS-AF 1673
Query: 183 NLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRS--GEGIIITSHDKLAYYL 240
V+I GT LYD + + ++ G + S G+ +I+TSH+ AYY
Sbjct: 1674 ACKTDEVIILGTNLYDGAEHKYMPYTINELLEMVGLASGNDSMAGKVLILTSHNMKAYYK 1733
Query: 241 RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGW 300
+ L LP ES + D LN E+A + + ++ W Y+Y R+ +NP YG+
Sbjct: 1734 KFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVR- 1792
Query: 301 DEVIADPSLSLKQRALVTDAARALDKAKMMRFDE---------KSGNFYCTEL------G 345
D + +S+ LV L ++ + D+ G+ TE+ G
Sbjct: 1793 DT--SPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNG 1850
Query: 346 RIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLC 405
IASH+ + + +++++ L ++ ++S + EFE++ +R ++ L L + L
Sbjct: 1851 LIASHYGVSFFTIQSFVSSLSNTSTLKNMLYVLSTAVEFESVPLRKGDRALLVKLSKRL- 1909
Query: 406 PVEVKGGPSNKHG--KISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRR 463
P+ S+ K+ +L+Q Y SR + +D I + ++ + +
Sbjct: 1910 PLRFPEHTSSGSVSFKVFLLLQAYFSRLELPV-DFQNDLKDILEKVVPLINVVVDILSAN 1968
Query: 464 GWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGAD-LDRLQEMEEKD 522
G+ + M + + + + +W +PLRQ +IL K +E + + + +E+++
Sbjct: 1969 GYLNATTAM-DLAQMLIQGVWDVDNPLRQIP-HFNNKILEKCKEINVETVYDIMALEDEE 2026
Query: 523 IGALIRYTPGGRL-VKQYLGYFPSIQLSATV----SPITRTVLKIGLAIT----PE---F 570
++ T V ++ +P+++L+ ++ S I+ KI + +T PE
Sbjct: 2027 RDEILTLTDSQLAQVAAFVNNYPNVELTYSLNNSDSLISGVKQKITIQLTRDVEPENLQV 2086
Query: 571 TWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYY 630
T + + + WW+++ + +Y + TL K + E L F P H
Sbjct: 2087 TSEKYPFDKLESWWLVLGEVSKKELYAIKKVTLNKETQQYE---LEFDTPTSGKH--NLT 2141
Query: 631 IRAVSDSWLHAE 642
I V DS+L A+
Sbjct: 2142 IWCVCDSYLDAD 2153
Score = 44 (20.5 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 14/70 (20%), Positives = 34/70 (48%)
Query: 346 RIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLC 405
+I I S++ +NE+++ N ++ +S++ ++ D+E+++ E + +
Sbjct: 168 KIQHELGINIDSLK-FNELVKLMKNITDYETHPDNSNKQAVAILADDEKSDEEEVTEMSN 226
Query: 406 PVEVKGGPSN 415
V GG N
Sbjct: 227 NANVLGGEIN 236
Score = 42 (19.8 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 166 EGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPK 200
EG +L+C T + N+ TV+ + Y+PK
Sbjct: 512 EGDSNMLICAPTGSGKTNIALLTVLKALSHHYNPK 546
Score = 38 (18.4 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 350 HFYIQY-SSVETYNEMLR 366
H+Y + S+VETY ++L+
Sbjct: 108 HYYPKDPSNVETYEQILQ 125
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 805 (288.4 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 167/441 (37%), Positives = 258/441 (58%)
Query: 505 LEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGL 564
LE++ + ++ + +K++ +R + Y P++ + + PIT+T++KI L
Sbjct: 1187 LEKKNLTYESIEHLSKKELLFFMRNEIYTNQILYYRNIIPNLDIDGYIQPITQTIMKINL 1246
Query: 565 AITPEFT-WKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFE 623
+ T W D ++ + + I + ++ ++ I + + F++ K+ R + +SF P+
Sbjct: 1247 NVKLTNTIWSDQWNDIIENFHIFLLNTLNNDILYFQKFSIHKK-DRKKIHDISFEFPLSN 1305
Query: 624 PHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEAL 683
PPQ ++ +S +W + + + +NL + Q +E+L L PL L Y
Sbjct: 1306 QIPPQITVQFLSMNWCNLSFVHIFNTNNLFINQKINVFSEILPLTPLSTNVLNIPNYIKF 1365
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
++F +FNPIQTQ+FH +HTD N+LLGAPTGSGKT+ EL +L K VYI P+
Sbjct: 1366 FSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPM 1425
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSR 803
KAIV ER WK + S K ++E+TGD + + ++III TPEK D I+RNW ++
Sbjct: 1426 KAIVNERYKSWKSKFKSLFNKNVIELTGDKNENKENIAESNIIICTPEKLDVITRNWKNK 1485
Query: 804 NYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLA 862
+VK + L+I DEIHLLG E RG ++E++V+R + + ++ + +R IGL+T + + DL
Sbjct: 1486 KFVKNINLIIFDEIHLLGQENRGGVIEILVNRFKNMQNELNKKIRLIGLTTVITSVDDLI 1545
Query: 863 DWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLI 922
WL V E LFNF S R VP + HI G+ K YC RM+ MNK + AI ++ TK VLI
Sbjct: 1546 LWLDVKENYLFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLI 1605
Query: 923 FVSSRRQTRLTALDLIQFAAS 943
FVSSRRQTRLTA D+I S
Sbjct: 1606 FVSSRRQTRLTAYDIISLNLS 1626
Score = 803 (287.7 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 170/463 (36%), Positives = 285/463 (61%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAA 61
E++Q + RI+ +SATLPNY +V FL+V +M ++F+ YR I L + GI E N
Sbjct: 615 ETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CYYFNEKYRSIQLDKTLYGIHEENNNK 673
Query: 62 RNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ 121
+ Y ++++SL++ Q ++FV SR +T KT + L++ A + ++E F N+ +
Sbjct: 674 LYIAKNIYTYNEIINSLKKDKQCIIFVCSRNETNKTIEFLINHALKNNEIEYFVNNVYTD 733
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWG 181
IKK + KS N + + + +HHAGM RSD+ L E LF + + VL CT+TLAWG
Sbjct: 734 ND-IKKKIKKSNNLYIKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWG 792
Query: 182 VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDI---FGRAGRPQFDRSGEGIIITSHDKLAY 238
VNLP HTV+IKGT + ++G D+ +LDI FGR GRPQ++ G I+IT KL
Sbjct: 793 VNLPVHTVIIKGTNYFSSESGKLEDMDILDINQIFGRCGRPQYESHGHAILITERTKLYK 852
Query: 239 YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
Y++LLT+ IES F+ +++++LNAE+++GT+ N+++ WL YTYL IRMK NP Y +
Sbjct: 853 YIKLLTNNTVIESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNPYLYDV 912
Query: 299 GWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV 358
++ D +L K++ ++ A + L + K++R + +F T G+IA+ +Y+ Y ++
Sbjct: 913 ---DINNDLNLYNKRKDIIMKAIQNLSENKLVRRVLLTNDFIGTFYGQIAAKYYVDYKTI 969
Query: 359 ETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHG 418
+ E ++ + N E+I+++S + EFENI +R+E+ + L + C ++ + S K+
Sbjct: 970 GMFAENVQNN-NYIEIIQVISKAKEFENIQIRNEDMKDFLYL-KDKCDIKEEYDES-KNM 1026
Query: 419 KISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCL 461
+ ILI++Y+ R I+ FS++ + YI ++ RI+ A ++ CL
Sbjct: 1027 TLRILIEVYLRRLQINNFSIICEINYIVQNIIRILYAYYDICL 1069
Score = 751 (269.4 bits), Expect = 6.2e-74, Sum P(4) = 6.2e-74
Identities = 188/635 (29%), Positives = 320/635 (50%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+ K++YIAP+K++V E N ++ +L + E T +Y+ L II++ PEK
Sbjct: 504 EFKIIYIAPMKSLVFEITNLFRKKL-KIFNLNVCEYTKEYSLSSKELEQVHIIVTVPEKL 562
Query: 794 DGISRNWH------SRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVR 847
D + RN + +K + +ILDE+HLL +RG ++E IVSR S ++ R
Sbjct: 563 DILLRNSSYSTTVSDESLIKYIKCLILDEVHLLNTDRGDVIETIVSRFLQYSETSQSIRR 622
Query: 848 FIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPA 907
+ +S L N D+ D+L V + F R + L+ + G + + N
Sbjct: 623 IMAMSATLPNYKDVRDFLKVENDMCYYFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYT 682
Query: 908 YAAICTH-SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG--MPEEDLQMVLSQ 964
Y I K +IFV SR +T T LI A + F+ + D++ + +
Sbjct: 683 YNEIINSLKKDKQCIIFVCSRNETNKTIEFLINHALKNNEIEYFVNNVYTDNDIKKKIKK 742
Query: 965 VTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII 1024
+ ++Q ++G +HHAG++ D+ LVE LF VL CTSTLAWGVNLP H VII
Sbjct: 743 SNNLYIKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVII 802
Query: 1025 KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
KGT Y+ ++ + D I DI Q+ GR GRPQY+ HG A+++ K Y K L
Sbjct: 803 KGTNYFSSESGKLEDMDILDINQIFGRCGRPQYESHGHAILITERTKLYKYIKLLTNNTV 862
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSS 1144
+ES+ + +H NAEI GTI + ED + +L +TYLF R+ NP Y ++ L +
Sbjct: 863 IESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNPYLYDVDINNDLNLYN 922
Query: 1145 YLSRLVQNTFEDLEDSGCVK---MTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS 1201
++ ++L ++ V+ +T D + T G IA++YY+ Y T+ MF N+ +
Sbjct: 923 KRKDIIMKAIQNLSENKLVRRVLLTNDFIG-TFYGQIAAKYYVDYKTIGMFAENVQNNNY 981
Query: 1202 LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSR 1261
+E+ + ++S A E++ + +R NED + L + + + + ++ +L + + R
Sbjct: 982 IEI-IQVISKAKEFENIQIR-NEDM-KDFLYLKDKCDIKEEYDESKNMTLRILIEVYLRR 1038
Query: 1262 LDLPISDYVTDLKSVLDQSIRIIQAMIDICANS-GWLSSSITCMH-LLQMVMQGLWFEQD 1319
L + + ++ ++ IRI+ A DIC N +S+ I H L+ +++ L +
Sbjct: 1039 LQINNFSIICEINYIVQNIIRILYAYYDICLNILKNISNLIMNTHNLIVAILRRLPI--N 1096
Query: 1320 SALWMFPCMNNDLLGTLRARGISTVQQLLDIPKEN 1354
++ C N++L + ++ +L +I K+N
Sbjct: 1097 CGIFRHFCYKNEMLEKNKKAILTNKDRLKNIKKDN 1131
Score = 552 (199.4 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 115/296 (38%), Positives = 183/296 (61%)
Query: 959 QMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP 1018
Q L+ + +++L++ L++GIG+HHAGLN+ D+++VE LF N IQ+L+CTSTLAWG+NLP
Sbjct: 1796 QNYLNLIENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLP 1855
Query: 1019 AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF 1078
A+LVIIKG E+YD KTK+Y D P TD+LQM+GRAGRPQ+D A++LV E +K+ K F
Sbjct: 1856 AYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEKRKNAIKNF 1915
Query: 1079 LYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDT- 1137
LY P +ES++ + ++H NAEI S I +KED +YL+ +Y F+RL NP+YY E
Sbjct: 1916 LYHPMNIESNIMENFNEHINAEICSNVINNKEDIFNYLTKSYYFKRLFSNPSYYIKEVQY 1975
Query: 1138 ----EAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFG 1193
E LS++ +++ + D+ ++G +K V+ L + Y L+Y +
Sbjct: 1976 VQFFENSKLSTHAKKIIYDHLNDVIENG-IKFL---VQNKCLEVVQENYVLNY-----YA 2026
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
+ +G S+ +I + ++ + + N+ ++ +D+N +D HV
Sbjct: 2027 TPLGHIASM---YYIKCETVYFFYTSIQAGKKHKNDKMNNMNSTKIDDNTMD--HV 2077
Score = 329 (120.9 bits), Expect = 6.0e-44, Sum P(4) = 6.0e-44
Identities = 73/240 (30%), Positives = 129/240 (53%)
Query: 134 NKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKG 193
N+ L E+ +G+HHAG+ +D+ + E LF ++++L+CT+TLAWG+NLPA+ V+IKG
Sbjct: 1804 NEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLVIIKG 1863
Query: 194 TQLYDPKAGGWRDL---GMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIE 250
+ YD K ++D+ +L + GRAGRPQFD I++ + L + IE
Sbjct: 1864 NEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEKRKNAIKNFLYHPMNIE 1923
Query: 251 SQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAY--GIGWDEVIADPS 308
S + + +++NAE+ + N ++ +L +Y R+ NP Y + + + +
Sbjct: 1924 SNIMENFNEHINAEICSNVINNKEDIFNYLTKSYYFKRLFSNPSYYIKEVQYVQFFENSK 1983
Query: 309 LSLKQRALVTD--------AARALDKAKMMRFDEKSG--NFYCTELGRIASHFYIQYSSV 358
LS + ++ D + L + K + +++ N+Y T LG IAS +YI+ +V
Sbjct: 1984 LSTHAKKIIYDHLNDVIENGIKFLVQNKCLEVVQENYVLNYYATPLGHIASMYYIKCETV 2043
Score = 196 (74.1 bits), Expect = 2.5e-169, Sum P(4) = 2.5e-169
Identities = 58/213 (27%), Positives = 100/213 (46%)
Query: 1201 SLEVF--LHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAH 1258
SLE + ++ A E+D++P+RHNED +N L ++ +D N P+VK LL +
Sbjct: 2146 SLEFYDIFELVVQAKEFDDIPLRHNEDKYNVKLRNQIPLDIDMNM---PNVKTYLLLLSR 2202
Query: 1259 FSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICA---NSGWLSSSITCMHLLQMVMQGLW 1315
F DY DLK V+DQ R+I A IDIC N ++ I + + ++
Sbjct: 2203 FYECTYETVDYHIDLKLVMDQIARVINAFIDICLLFHNYNYIKKLILIFNCINQKVK--- 2259
Query: 1316 FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFP 1375
++L++ + + L+ I + QL+ K L + + F +++++ LQ P
Sbjct: 2260 -PNTNSLYIIKDITEYQIYKLKQLDIYNINQLIKFDKSYLYS-LNIFDITQINFILQ-LP 2316
Query: 1376 RIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKN 1408
+ ++L +DI EN + N KN
Sbjct: 2317 VFNMNVKLFYKDIHSENENEKEKEKENKNEEKN 2349
Score = 103 (41.3 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 6 RMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNEL 65
+ IR++GL+ + + ++ +L V E LF F SS R +P +G ++ + R +
Sbjct: 1527 KKIRLIGLTTVITSVDDLILWLDVK-ENYLFNFPSSCRIVPCKTHILGFTQKAYCNRMSV 1585
Query: 66 LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDL---ARRYEDLEVFN--ND-TH 119
+++ + ++ Q ++FV SR+ T TA ++ L + L V N ND H
Sbjct: 1586 MNKNVFD-AINQYAQTKNVLIFVSSRRQTRLTAYDIISLNLSSHNLNFLHVENLLNDKNH 1644
Query: 120 PQ--LSLIKKDVM-KSRNKDLIE 139
L+ KK+ K NKD+ E
Sbjct: 1645 IDFLLNTQKKNKKNKINNKDMNE 1667
Score = 102 (41.0 bits), Expect = 6.2e-74, Sum P(4) = 6.2e-74
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 680 YEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH---LFNTQSDMK 736
++ +++F +FN +Q+++F+ + ++ N+L+ APTG GKT A L +L LF Q+ +K
Sbjct: 331 HKYIFDFEYFNYVQSKVFNSAFRSNKNLLVCAPTGCGKTNIALLVILQQIILFCEQNKIK 390
Query: 737 V 737
+
Sbjct: 391 L 391
Score = 67 (28.6 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 21/96 (21%), Positives = 44/96 (45%)
Query: 370 NDS----EVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQ 425
NDS ++ E+V + EF++I +R E ++ ++ P+++ N + +L +
Sbjct: 2144 NDSLEFYDIFELVVQAKEFDDIPLRHNE-DKYNVKLRNQIPLDIDMNMPNVKTYLLLLSR 2202
Query: 426 LYISRGWIDTFSLVSDAAYISASLARIMRALFETCL 461
Y +T D + +AR++ A + CL
Sbjct: 2203 FYECT--YETVDYHIDLKLVMDQIARVINAFIDICL 2236
Score = 51 (23.0 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1425 WWLVLGNTNTSELYALKRISFSDRLNTHMELPSGIT-TFQGMK-------LVVVSDCYLG 1476
W+ +L +T E ++KR + N +++ S I+ T + M+ + + +D Y G
Sbjct: 2406 WFAILHDTEQDESISIKRFN-----NNNLKKVSVISFTLEDMEKGKYNFVIYIHNDTYYG 2460
Query: 1477 FEQEHSIEALVE 1488
E E I+ +E
Sbjct: 2461 IEHEVHIDLCIE 2472
Score = 45 (20.9 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1387 DIDGENSL-TLNIRMDKMNSWKNTS 1410
D D EN + +LN+ KMN NT+
Sbjct: 2083 DDDKENHVDSLNVEAIKMNDMDNTN 2107
Score = 42 (19.8 bits), Expect = 7.9e-74, Sum P(3) = 7.9e-74
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 770 TGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLM 812
T DY DL ++ D I + I +H+ NY+KK+ L+
Sbjct: 2210 TVDYHIDLKLVM--DQIARVINAFIDICLLFHNYNYIKKLILI 2250
Score = 40 (19.1 bits), Expect = 9.9e-46, Sum P(4) = 9.9e-46
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 17 LPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVD 76
+PNY++ F NP + F +++ + I + P + + ++ E+C + +
Sbjct: 1359 IPNYIKFFSFKYFNP-IQTQMFHATFH----TDENILLGAPTGSGKT-VIGELCILR--N 1410
Query: 77 SLRQGHQAMVFVHSRKDTVKTAQK 100
LR Q V++ K V K
Sbjct: 1411 LLRCEGQKSVYICPMKAIVNERYK 1434
Score = 38 (18.4 bits), Expect = 1.5e-73, Sum P(2) = 1.5e-73
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 582 RWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHA 641
+W+ I+ D+E D + F + + +SFT+ E + I +D++
Sbjct: 2405 QWFAILHDTEQDESISIKRFN-NNNLKK--VSVISFTLEDMEKGKYNFVIYIHNDTYYGI 2461
Query: 642 E 642
E
Sbjct: 2462 E 2462
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 805 (288.4 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 167/441 (37%), Positives = 258/441 (58%)
Query: 505 LEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGL 564
LE++ + ++ + +K++ +R + Y P++ + + PIT+T++KI L
Sbjct: 1187 LEKKNLTYESIEHLSKKELLFFMRNEIYTNQILYYRNIIPNLDIDGYIQPITQTIMKINL 1246
Query: 565 AITPEFT-WKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFE 623
+ T W D ++ + + I + ++ ++ I + + F++ K+ R + +SF P+
Sbjct: 1247 NVKLTNTIWSDQWNDIIENFHIFLLNTLNNDILYFQKFSIHKK-DRKKIHDISFEFPLSN 1305
Query: 624 PHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEAL 683
PPQ ++ +S +W + + + +NL + Q +E+L L PL L Y
Sbjct: 1306 QIPPQITVQFLSMNWCNLSFVHIFNTNNLFINQKINVFSEILPLTPLSTNVLNIPNYIKF 1365
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
++F +FNPIQTQ+FH +HTD N+LLGAPTGSGKT+ EL +L K VYI P+
Sbjct: 1366 FSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIGELCILRNLLRCEGQKSVYICPM 1425
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSR 803
KAIV ER WK + S K ++E+TGD + + ++III TPEK D I+RNW ++
Sbjct: 1426 KAIVNERYKSWKSKFKSLFNKNVIELTGDKNENKENIAESNIIICTPEKLDVITRNWKNK 1485
Query: 804 NYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLA 862
+VK + L+I DEIHLLG E RG ++E++V+R + + ++ + +R IGL+T + + DL
Sbjct: 1486 KFVKNINLIIFDEIHLLGQENRGGVIEILVNRFKNMQNELNKKIRLIGLTTVITSVDDLI 1545
Query: 863 DWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLI 922
WL V E LFNF S R VP + HI G+ K YC RM+ MNK + AI ++ TK VLI
Sbjct: 1546 LWLDVKENYLFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLI 1605
Query: 923 FVSSRRQTRLTALDLIQFAAS 943
FVSSRRQTRLTA D+I S
Sbjct: 1606 FVSSRRQTRLTAYDIISLNLS 1626
Score = 803 (287.7 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 170/463 (36%), Positives = 285/463 (61%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAA 61
E++Q + RI+ +SATLPNY +V FL+V +M ++F+ YR I L + GI E N
Sbjct: 615 ETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CYYFNEKYRSIQLDKTLYGIHEENNNK 673
Query: 62 RNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ 121
+ Y ++++SL++ Q ++FV SR +T KT + L++ A + ++E F N+ +
Sbjct: 674 LYIAKNIYTYNEIINSLKKDKQCIIFVCSRNETNKTIEFLINHALKNNEIEYFVNNVYTD 733
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWG 181
IKK + KS N + + + +HHAGM RSD+ L E LF + + VL CT+TLAWG
Sbjct: 734 ND-IKKKIKKSNNLYIKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWG 792
Query: 182 VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDI---FGRAGRPQFDRSGEGIIITSHDKLAY 238
VNLP HTV+IKGT + ++G D+ +LDI FGR GRPQ++ G I+IT KL
Sbjct: 793 VNLPVHTVIIKGTNYFSSESGKLEDMDILDINQIFGRCGRPQYESHGHAILITERTKLYK 852
Query: 239 YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
Y++LLT+ IES F+ +++++LNAE+++GT+ N+++ WL YTYL IRMK NP Y +
Sbjct: 853 YIKLLTNNTVIESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNPYLYDV 912
Query: 299 GWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV 358
++ D +L K++ ++ A + L + K++R + +F T G+IA+ +Y+ Y ++
Sbjct: 913 ---DINNDLNLYNKRKDIIMKAIQNLSENKLVRRVLLTNDFIGTFYGQIAAKYYVDYKTI 969
Query: 359 ETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHG 418
+ E ++ + N E+I+++S + EFENI +R+E+ + L + C ++ + S K+
Sbjct: 970 GMFAENVQNN-NYIEIIQVISKAKEFENIQIRNEDMKDFLYL-KDKCDIKEEYDES-KNM 1026
Query: 419 KISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCL 461
+ ILI++Y+ R I+ FS++ + YI ++ RI+ A ++ CL
Sbjct: 1027 TLRILIEVYLRRLQINNFSIICEINYIVQNIIRILYAYYDICL 1069
Score = 751 (269.4 bits), Expect = 6.2e-74, Sum P(4) = 6.2e-74
Identities = 188/635 (29%), Positives = 320/635 (50%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+ K++YIAP+K++V E N ++ +L + E T +Y+ L II++ PEK
Sbjct: 504 EFKIIYIAPMKSLVFEITNLFRKKL-KIFNLNVCEYTKEYSLSSKELEQVHIIVTVPEKL 562
Query: 794 DGISRNWH------SRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVR 847
D + RN + +K + +ILDE+HLL +RG ++E IVSR S ++ R
Sbjct: 563 DILLRNSSYSTTVSDESLIKYIKCLILDEVHLLNTDRGDVIETIVSRFLQYSETSQSIRR 622
Query: 848 FIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPA 907
+ +S L N D+ D+L V + F R + L+ + G + + N
Sbjct: 623 IMAMSATLPNYKDVRDFLKVENDMCYYFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYT 682
Query: 908 YAAICTH-SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG--MPEEDLQMVLSQ 964
Y I K +IFV SR +T T LI A + F+ + D++ + +
Sbjct: 683 YNEIINSLKKDKQCIIFVCSRNETNKTIEFLINHALKNNEIEYFVNNVYTDNDIKKKIKK 742
Query: 965 VTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII 1024
+ ++Q ++G +HHAG++ D+ LVE LF VL CTSTLAWGVNLP H VII
Sbjct: 743 SNNLYIKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVII 802
Query: 1025 KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
KGT Y+ ++ + D I DI Q+ GR GRPQY+ HG A+++ K Y K L
Sbjct: 803 KGTNYFSSESGKLEDMDILDINQIFGRCGRPQYESHGHAILITERTKLYKYIKLLTNNTV 862
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSS 1144
+ES+ + +H NAEI GTI + ED + +L +TYLF R+ NP Y ++ L +
Sbjct: 863 IESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFIRMKKNPYLYDVDINNDLNLYN 922
Query: 1145 YLSRLVQNTFEDLEDSGCVK---MTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS 1201
++ ++L ++ V+ +T D + T G IA++YY+ Y T+ MF N+ +
Sbjct: 923 KRKDIIMKAIQNLSENKLVRRVLLTNDFIG-TFYGQIAAKYYVDYKTIGMFAENVQNNNY 981
Query: 1202 LEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSR 1261
+E+ + ++S A E++ + +R NED + L + + + + ++ +L + + R
Sbjct: 982 IEI-IQVISKAKEFENIQIR-NEDM-KDFLYLKDKCDIKEEYDESKNMTLRILIEVYLRR 1038
Query: 1262 LDLPISDYVTDLKSVLDQSIRIIQAMIDICANS-GWLSSSITCMH-LLQMVMQGLWFEQD 1319
L + + ++ ++ IRI+ A DIC N +S+ I H L+ +++ L +
Sbjct: 1039 LQINNFSIICEINYIVQNIIRILYAYYDICLNILKNISNLIMNTHNLIVAILRRLPI--N 1096
Query: 1320 SALWMFPCMNNDLLGTLRARGISTVQQLLDIPKEN 1354
++ C N++L + ++ +L +I K+N
Sbjct: 1097 CGIFRHFCYKNEMLEKNKKAILTNKDRLKNIKKDN 1131
Score = 552 (199.4 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 115/296 (38%), Positives = 183/296 (61%)
Query: 959 QMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP 1018
Q L+ + +++L++ L++GIG+HHAGLN+ D+++VE LF N IQ+L+CTSTLAWG+NLP
Sbjct: 1796 QNYLNLIENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLP 1855
Query: 1019 AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF 1078
A+LVIIKG E+YD KTK+Y D P TD+LQM+GRAGRPQ+D A++LV E +K+ K F
Sbjct: 1856 AYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEKRKNAIKNF 1915
Query: 1079 LYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDT- 1137
LY P +ES++ + ++H NAEI S I +KED +YL+ +Y F+RL NP+YY E
Sbjct: 1916 LYHPMNIESNIMENFNEHINAEICSNVINNKEDIFNYLTKSYYFKRLFSNPSYYIKEVQY 1975
Query: 1138 ----EAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFG 1193
E LS++ +++ + D+ ++G +K V+ L + Y L+Y +
Sbjct: 1976 VQFFENSKLSTHAKKIIYDHLNDVIENG-IKFL---VQNKCLEVVQENYVLNY-----YA 2026
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHV 1249
+ +G S+ +I + ++ + + N+ ++ +D+N +D HV
Sbjct: 2027 TPLGHIASM---YYIKCETVYFFYTSIQAGKKHKNDKMNNMNSTKIDDNTMD--HV 2077
Score = 329 (120.9 bits), Expect = 6.0e-44, Sum P(4) = 6.0e-44
Identities = 73/240 (30%), Positives = 129/240 (53%)
Query: 134 NKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKG 193
N+ L E+ +G+HHAG+ +D+ + E LF ++++L+CT+TLAWG+NLPA+ V+IKG
Sbjct: 1804 NEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLVIIKG 1863
Query: 194 TQLYDPKAGGWRDL---GMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIE 250
+ YD K ++D+ +L + GRAGRPQFD I++ + L + IE
Sbjct: 1864 NEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEKRKNAIKNFLYHPMNIE 1923
Query: 251 SQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAY--GIGWDEVIADPS 308
S + + +++NAE+ + N ++ +L +Y R+ NP Y + + + +
Sbjct: 1924 SNIMENFNEHINAEICSNVINNKEDIFNYLTKSYYFKRLFSNPSYYIKEVQYVQFFENSK 1983
Query: 309 LSLKQRALVTD--------AARALDKAKMMRFDEKSG--NFYCTELGRIASHFYIQYSSV 358
LS + ++ D + L + K + +++ N+Y T LG IAS +YI+ +V
Sbjct: 1984 LSTHAKKIIYDHLNDVIENGIKFLVQNKCLEVVQENYVLNYYATPLGHIASMYYIKCETV 2043
Score = 196 (74.1 bits), Expect = 2.5e-169, Sum P(4) = 2.5e-169
Identities = 58/213 (27%), Positives = 100/213 (46%)
Query: 1201 SLEVF--LHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAH 1258
SLE + ++ A E+D++P+RHNED +N L ++ +D N P+VK LL +
Sbjct: 2146 SLEFYDIFELVVQAKEFDDIPLRHNEDKYNVKLRNQIPLDIDMNM---PNVKTYLLLLSR 2202
Query: 1259 FSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICA---NSGWLSSSITCMHLLQMVMQGLW 1315
F DY DLK V+DQ R+I A IDIC N ++ I + + ++
Sbjct: 2203 FYECTYETVDYHIDLKLVMDQIARVINAFIDICLLFHNYNYIKKLILIFNCINQKVK--- 2259
Query: 1316 FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFP 1375
++L++ + + L+ I + QL+ K L + + F +++++ LQ P
Sbjct: 2260 -PNTNSLYIIKDITEYQIYKLKQLDIYNINQLIKFDKSYLYS-LNIFDITQINFILQ-LP 2316
Query: 1376 RIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKN 1408
+ ++L +DI EN + N KN
Sbjct: 2317 VFNMNVKLFYKDIHSENENEKEKEKENKNEEKN 2349
Score = 103 (41.3 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 6 RMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNEL 65
+ IR++GL+ + + ++ +L V E LF F SS R +P +G ++ + R +
Sbjct: 1527 KKIRLIGLTTVITSVDDLILWLDVK-ENYLFNFPSSCRIVPCKTHILGFTQKAYCNRMSV 1585
Query: 66 LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDL---ARRYEDLEVFN--ND-TH 119
+++ + ++ Q ++FV SR+ T TA ++ L + L V N ND H
Sbjct: 1586 MNKNVFD-AINQYAQTKNVLIFVSSRRQTRLTAYDIISLNLSSHNLNFLHVENLLNDKNH 1644
Query: 120 PQ--LSLIKKDVM-KSRNKDLIE 139
L+ KK+ K NKD+ E
Sbjct: 1645 IDFLLNTQKKNKKNKINNKDMNE 1667
Score = 102 (41.0 bits), Expect = 6.2e-74, Sum P(4) = 6.2e-74
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 680 YEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH---LFNTQSDMK 736
++ +++F +FN +Q+++F+ + ++ N+L+ APTG GKT A L +L LF Q+ +K
Sbjct: 331 HKYIFDFEYFNYVQSKVFNSAFRSNKNLLVCAPTGCGKTNIALLVILQQIILFCEQNKIK 390
Query: 737 V 737
+
Sbjct: 391 L 391
Score = 67 (28.6 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 21/96 (21%), Positives = 44/96 (45%)
Query: 370 NDS----EVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQ 425
NDS ++ E+V + EF++I +R E ++ ++ P+++ N + +L +
Sbjct: 2144 NDSLEFYDIFELVVQAKEFDDIPLRHNE-DKYNVKLRNQIPLDIDMNMPNVKTYLLLLSR 2202
Query: 426 LYISRGWIDTFSLVSDAAYISASLARIMRALFETCL 461
Y +T D + +AR++ A + CL
Sbjct: 2203 FYECT--YETVDYHIDLKLVMDQIARVINAFIDICL 2236
Score = 51 (23.0 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1425 WWLVLGNTNTSELYALKRISFSDRLNTHMELPSGIT-TFQGMK-------LVVVSDCYLG 1476
W+ +L +T E ++KR + N +++ S I+ T + M+ + + +D Y G
Sbjct: 2406 WFAILHDTEQDESISIKRFN-----NNNLKKVSVISFTLEDMEKGKYNFVIYIHNDTYYG 2460
Query: 1477 FEQEHSIEALVE 1488
E E I+ +E
Sbjct: 2461 IEHEVHIDLCIE 2472
Score = 45 (20.9 bits), Expect = 2.5e-206, Sum P(5) = 2.5e-206
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1387 DIDGENSL-TLNIRMDKMNSWKNTS 1410
D D EN + +LN+ KMN NT+
Sbjct: 2083 DDDKENHVDSLNVEAIKMNDMDNTN 2107
Score = 42 (19.8 bits), Expect = 7.9e-74, Sum P(3) = 7.9e-74
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 770 TGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLM 812
T DY DL ++ D I + I +H+ NY+KK+ L+
Sbjct: 2210 TVDYHIDLKLVM--DQIARVINAFIDICLLFHNYNYIKKLILI 2250
Score = 40 (19.1 bits), Expect = 9.9e-46, Sum P(4) = 9.9e-46
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 17 LPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVD 76
+PNY++ F NP + F +++ + I + P + + ++ E+C + +
Sbjct: 1359 IPNYIKFFSFKYFNP-IQTQMFHATFH----TDENILLGAPTGSGKT-VIGELCILR--N 1410
Query: 77 SLRQGHQAMVFVHSRKDTVKTAQK 100
LR Q V++ K V K
Sbjct: 1411 LLRCEGQKSVYICPMKAIVNERYK 1434
Score = 38 (18.4 bits), Expect = 1.5e-73, Sum P(2) = 1.5e-73
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 582 RWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHA 641
+W+ I+ D+E D + F + + +SFT+ E + I +D++
Sbjct: 2405 QWFAILHDTEQDESISIKRFN-NNNLKK--VSVISFTLEDMEKGKYNFVIYIHNDTYYGI 2461
Query: 642 E 642
E
Sbjct: 2462 E 2462
>GENEDB_PFALCIPARUM|PFD1060w [details] [associations]
symbol:PFD1060w "u5 small nuclear
ribonucleoprotein-specific protein, putative" species:5833
"Plasmodium falciparum" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 651 (234.2 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 129/297 (43%), Positives = 194/297 (65%)
Query: 5 QRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
++ IR+VGLSATLPNY +V FLR + E G+F+FD S+RP+ + Q YIGI E +
Sbjct: 964 RKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKGIKKYA 1023
Query: 65 LLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSL 124
L++E+ Y+KV++ + +Q ++FVHSRK+T +T++ L+D + ++L F D +
Sbjct: 1024 LMNELTYEKVLEEAGK-NQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKISSEI 1082
Query: 125 IKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNL 184
+ + N++L E+ G+HHAG+ R DR L E LFS+ ++VLVCT+TLAWG+NL
Sbjct: 1083 LLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAWGINL 1142
Query: 185 PAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAYYLR 241
PAHTV+IKGT +Y+ G + +L +D+ GR+GRPQ+D+SG+ IIIT H L YL
Sbjct: 1143 PAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHKNLQLYLS 1202
Query: 242 LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
L QL IES + ++ + +NAE+ L + N+ +A WL +TY+ IRM P YG+
Sbjct: 1203 LNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGV 1259
Score = 517 (187.1 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 121/303 (39%), Positives = 178/303 (58%)
Query: 837 YISSQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+IS + ++ +R +GLS L N D+ +L E G+F F S RPV +E H G K
Sbjct: 959 HISIRRKK-IRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKK 1017
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLI-QFAASDETPRQFLGMP 954
+ MN+ Y + + +LIFV SR++T T+ LI +F SD + FL
Sbjct: 1018 GIKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSK-FLIDK 1076
Query: 955 EEDLQMVLSQ---VTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
+ +++LS+ V ++ L++ L FG G+HHAGL DR LVE+LF++ IQVLVCTSTL
Sbjct: 1077 KISSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTL 1136
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
AWG+NLPAH VIIKGT Y+ + + D+LQM+GR+GRPQYD+ GKA+I+
Sbjct: 1137 AWGINLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHKN 1196
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
Y E +ES+L + + NAEIV I + +DA+++L TY++ R+ P+
Sbjct: 1197 LQLYLSLNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSL 1256
Query: 1132 YGL 1134
YG+
Sbjct: 1257 YGV 1259
Score = 447 (162.4 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 85/282 (30%), Positives = 166/282 (58%)
Query: 324 LDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSE 383
L+K ++++++K T +G+I+S++Y+ Y S++ YN+ L ++ N+ +++++ + S+E
Sbjct: 1362 LEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLNKYTNEIDLLKIFTMSNE 1421
Query: 384 FENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAA 443
F+NI +RDEE+ EL +++ L P+ VK + + KI+IL+QLY+S ++ + + +D
Sbjct: 1422 FKNIFIRDEEKTELSIIMEKL-PIPVKESINIPYTKINILLQLYLSNIILNGYIINADMV 1480
Query: 444 YISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILR 503
YI + RI R+ FE L++ + L++CK ++R++W PLRQF L E++R
Sbjct: 1481 YIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMWSTMTPLRQFGL-LSTELIR 1539
Query: 504 KLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIG 563
+E++ M + + + + + + + +FP ++L+A + PI +LK+
Sbjct: 1540 IIEKKNITFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHFPKLELNAYIQPINHKILKVD 1599
Query: 564 LAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTK 605
L I P+F + +HG +W+ V D ++ I H +LFTL K
Sbjct: 1600 LNIAPDFIYNPKYHGYFMLFWVFVFDISNESILHYDLFTLKK 1641
Score = 389 (142.0 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 88/269 (32%), Positives = 145/269 (53%)
Query: 961 VLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH 1020
V + D+ LRQ ++ GI H + + ++ +VE LF IQ+L+ + + +N+ A+
Sbjct: 2290 VFDYINDKMLRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYAN 2349
Query: 1021 LVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY 1080
VII T + D+ I +IL+M+ AGR D I + KK +YK F+Y
Sbjct: 2350 NVIILDTIITHFHNNKEEDYSIQNILEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIY 2409
Query: 1081 EPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAE 1140
EP VES++ D L + N EIV TI + +DA+ +L+W++ +RR+ NP YYGL+ E
Sbjct: 2410 EPLTVESNIEDNLPNFLNNEIVMSTIENYQDAIDWLTWSFFYRRIKKNPNYYGLKGISNE 2469
Query: 1141 GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGP 1198
+S YLS L++N E L + C+ + E T ++P LG I+S Y L Y + F +
Sbjct: 2470 HISDYLSELIENNMEILSFANCINIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLS 2529
Query: 1199 DTSLEV--FLHILSGASEYDELPVRHNED 1225
+L+ I+ ++ ++++ HN D
Sbjct: 2530 LKTLKKSRIFEIICLSNIFNDILKIHNYD 2558
Score = 289 (106.8 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 67/189 (35%), Positives = 115/189 (60%)
Query: 663 ELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHT-DNNVLLGAPTGSGKTISA 721
+L+ + LP + ++ + N + NPIQ++++ + ++ + N+L+ APTGSGKT A
Sbjct: 692 KLIHINELPEWT--HEVFSCV-NITKLNPIQSKVYDVAFNKYEENMLICAPTGSGKTNIA 748
Query: 722 ELAMLHLFNT---------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
L +L++ N+ + D K+VYI+P+KA+V E++ + RL + ++ E+TGD
Sbjct: 749 LLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSFNLRLKC-MNIKVSELTGD 807
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
L + II+ TPEK+D ISR W+ + + K+ L+I DEIHLL RG +LE I+
Sbjct: 808 VNLSTKELDDSQIIVMTPEKFDVISRKWNEKILLHKIKLIIFDEIHLLNEMRGNVLESII 867
Query: 833 SRM-RYISS 840
+R+ RY+ +
Sbjct: 868 ARINRYMDN 876
Score = 242 (90.2 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 66/249 (26%), Positives = 126/249 (50%)
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
H+KA +L QAH R LP++ Y+ + K+VL ++ ++I ++ID+ +++ L+ + M +
Sbjct: 2628 HLKAFILLQAHIHRYSLPLN-YIQETKTVLLKAYKLINSLIDVISSNNILNFCLFVMEVS 2686
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLL---DIPKENLQTVIGNFPV 1364
QM+ Q + S L+ P + L+ I V L+ D P++ L +
Sbjct: 2687 QMLTQSMKSTDQSNLYQLPHFDEHLIKKANDLEILDVYDLINAEDEPRDILLKHLNEKQR 2746
Query: 1365 SRLHQDLQRFPRIQVKLRLQRRDIDGENSLT-LNIRMDKMNSWKNTSRAFALRFPKIKDE 1423
S + FP I+V+ + N + LN+ +++ + A +L P K+E
Sbjct: 2747 SEIANVCNIFPIIEVQYEIDLDKSYKVNEIAQLNLTIERDLTDDAVIFAHSLYLPFEKEE 2806
Query: 1424 AWWLVLGNTNTSELYALKRISFSDRLNT---HMELPSGITTFQGMKLVVVSDCYLGFEQE 1480
WW+V+G + L ++K++S +N + ELP T+ + + V++DCY+G +QE
Sbjct: 2807 MWWIVIGIKKMNLLLSIKKLSLLKSVNNIKINFELPDKPNTYD-VVIYVINDCYVGCDQE 2865
Query: 1481 HSIEALVEQ 1489
+ + VE+
Sbjct: 2866 YEFKINVEE 2874
Score = 206 (77.6 bits), Expect = 8.5e-31, Sum P(2) = 8.5e-31
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 149 HAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGT---QLYDPKAGGWR 205
H M ++ + E LF + +++L+ + + +N+ A+ V+I T ++ K +
Sbjct: 2311 HNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTIITHFHNNKEEDYS 2370
Query: 206 DLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEV 265
+L++ AGR D I T K YY + L +ES +L + LN E+
Sbjct: 2371 IQNILEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIYEPLTVESNIEDNLPNFLNNEI 2430
Query: 266 ALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALD 325
+ T+ N ++A WL +++ R+K NP YG+ + I++ +S L+ + L
Sbjct: 2431 VMSTIENYQDAIDWLTWSFFYRRIKKNPNYYGL---KGISNEHISDYLSELIENNMEILS 2487
Query: 326 KAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLR--RHMNDSEVIEMVSHSSE 383
A + +E++ + LG I+S + + Y + +N+ + + + S + E++ S+
Sbjct: 2488 FANCINIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLSLKTLKKSRIFEIICLSNI 2547
Query: 384 FENIV 388
F +I+
Sbjct: 2548 FNDIL 2552
Score = 193 (73.0 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 42/121 (34%), Positives = 69/121 (57%)
Query: 722 ELAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMAL 780
+LA L N D+ K+VYIAPL ++ + +W+ + +M +TGD D+ L
Sbjct: 1819 KLADLLYNNNLIDLIKIVYIAPLDDVIIKTFKNWQ-AMKKTFDLKMCILTGDIQIDMKLL 1877
Query: 781 LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISS 840
+ II+S P +D IS+ W + ++ V I D + LL +G I+E+++SR+RYIS+
Sbjct: 1878 QTHHIILSNPSNYDNISKKWRRKKILQTVSFYIFDHMELLDTVQGGIMEILISRIRYIST 1937
Query: 841 Q 841
Q
Sbjct: 1938 Q 1938
Score = 177 (67.4 bits), Expect = 2.7e-174, Sum P(6) = 2.7e-174
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 615 LSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTA 674
L+F +PI + P Y ++ +SD WL EA + +L LP T+LLDL+PLP+ +
Sbjct: 1675 LTFFLPINDN--PFYIVKVISDKWLECEATINLYLKDLILPSQNFYSTQLLDLQPLPIHS 1732
Query: 675 L----GNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN 730
+ + + + N +FN I TQIF ++ + NVL+ + I AEL M+ +
Sbjct: 1733 IKYDKAHTFFNNIRNLHYFNSIHTQIFSSIFENNGNVLIASSNSKHYLIPAELGMIKILK 1792
Query: 731 TQS---DMKVVYIAPLKAIVRERMNDWK--DRLVSQLGKEMVEMTGDYTPDLMALLSADI 785
+ YI K + + +ND K D L + +++++ Y L D+
Sbjct: 1793 FLHCFYNFINTYIKKEKDVYKI-INDKKLADLLYNNNLIDLIKIV--YIAPL-----DDV 1844
Query: 786 IISTPEKWDGISRNW 800
II T + W + + +
Sbjct: 1845 IIKTFKNWQAMKKTF 1859
Score = 157 (60.3 bits), Expect = 2.0e-78, Sum P(4) = 2.0e-78
Identities = 46/250 (18%), Positives = 117/250 (46%)
Query: 1140 EGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTVSMFGSNIG 1197
E + + ++ + F LE +K + +TV T +G I+S YY+ Y ++ ++ +
Sbjct: 1345 EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLN 1404
Query: 1198 PDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQA 1257
T+ L I + ++E+ + +R E + +++ V + ++ P+ K N+L Q
Sbjct: 1405 KYTNEIDLLKIFTMSNEFKNIFIRDEEKTELSIIMEKLPIPVKES-INIPYTKINILLQL 1463
Query: 1258 HFSRLDLPISDYV--TDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW 1315
+ S + L + Y+ D+ + ++RI ++ +I + + +M+ + +W
Sbjct: 1464 YLSNIIL--NGYIINADMVYIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMW 1521
Query: 1316 FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LHQDLQRF 1374
+ L F ++ +L+ + + I T + L + T+ N +++ +++ + F
Sbjct: 1522 STM-TPLRQFGLLSTELIRIIEKKNI-TFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHF 1579
Query: 1375 PRIQVKLRLQ 1384
P++++ +Q
Sbjct: 1580 PKLELNAYIQ 1589
Score = 111 (44.1 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 847 RFIGLST-ALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK 905
R + LS+ +L N+ D A+W+G + +NF +VR +P+E+++ R SM +
Sbjct: 2023 RILCLSSCSLYNSKDFAEWIGCKKNDYYNFLSTVRDIPIEIYLHAVNIMNKQNRYISMQR 2082
Query: 906 PAYAAI--CTHSPTKP----VLIFVSSRRQTRLTALDLIQFAASD 944
Y I + P K V+IFV+ ++ + ALDLI A +D
Sbjct: 2083 QVYQNIRKLKNIPKKKKMQNVIIFVTDQKLCKTLALDLILSAYND 2127
Score = 57 (25.1 bits), Expect = 1.0e-114, Sum P(4) = 1.0e-114
Identities = 45/223 (20%), Positives = 98/223 (43%)
Query: 1221 RHNEDNHN-EALSQRVRFAVDNNRLD---DPHVKANLLFQAHFSRLDLPISDYVTDLKSV 1276
+HN DN+N + L + +D ++D D + K N++ + + + D+V + ++
Sbjct: 1949 QHNNDNNNNDNLIMSI-LNIDMIKMDNVEDDNNKKNIIHNNNNNNSNSKKDDFVQTINAL 2007
Query: 1277 LDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNND---LL 1333
+ +I I I + + I C+ L+ +D A W+ C ND L
Sbjct: 2008 QNFTIDNIYDYIGL--------NRILCLSSCS-----LYNSKDFAEWI-GCKKNDYYNFL 2053
Query: 1334 GTLRARGISTVQQLLDIP-KENLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDID-GE 1391
T+R I ++I K+N + +++Q++++ I K ++Q I +
Sbjct: 2054 STVRDIPIEIYLHAVNIMNKQNRYISMQR----QVYQNIRKLKNIPKKKKMQNVIIFVTD 2109
Query: 1392 NSLTLNIRMDK-MNSWKNTSRAFALRFPKIKDEAWWLVLGNTN 1433
L + +D ++++ + + F+L F +D+ + +TN
Sbjct: 2110 QKLCKTLALDLILSAYNDNFKYFSL-FENYEDDKYDTSKSSTN 2151
Score = 51 (23.0 bits), Expect = 3.2e-119, Sum P(4) = 3.2e-119
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 1070 PKKSFYKKFLYE--PFPVESSLRDQLHDHFN 1098
P ++FY L + P P+ S D+ H FN
Sbjct: 1713 PSQNFYSTQLLDLQPLPIHSIKYDKAHTFFN 1743
Score = 46 (21.3 bits), Expect = 1.4e-133, Sum P(5) = 1.4e-133
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 948 RQFLGMPEED-LQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVE 994
R+ +P++ +Q V+ VTDQ L +TL + L N K SL E
Sbjct: 2089 RKLKNIPKKKKMQNVIIFVTDQKLCKTLALDLILSAYNDNFKYFSLFE 2136
Score = 44 (20.5 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 366 RRHMNDSEVIEM--VSHSSEFENIVVRDEEQNELE 398
R ++ND E +E+ +S +E E+I D+ +E E
Sbjct: 228 RGYINDHETMELQELSDDNEEEDISEDDDGDDEEE 262
Score = 39 (18.8 bits), Expect = 1.3e-68, Sum P(6) = 1.3e-68
Identities = 17/77 (22%), Positives = 31/77 (40%)
Query: 634 VSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQ 693
+ + W + +YC L QA+T + K + T G +I + L NF + +
Sbjct: 426 IKNRW---KIYYCT-----LLGQAQTEEEKEEIKKEMKKTEEGQDILDELCNFKNVRKNK 477
Query: 694 TQIFHILYHTDNNVLLG 710
F + + + L G
Sbjct: 478 QSEFSKIIRKEADNLFG 494
Score = 38 (18.4 bits), Expect = 2.6e-54, Sum P(4) = 2.6e-54
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 169 LKVLVCTATLAWGVNL-PAHTVVIKGTQLYDPKAGGWR 205
LK+ + T + + L H +++ YD + WR
Sbjct: 1861 LKMCILTGDIQIDMKLLQTHHIILSNPSNYDNISKKWR 1898
>UNIPROTKB|Q8IFP1 [details] [associations]
symbol:PFD1060w "U5 small nuclear
ribonucleoprotein-specific protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 651 (234.2 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 129/297 (43%), Positives = 194/297 (65%)
Query: 5 QRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
++ IR+VGLSATLPNY +V FLR + E G+F+FD S+RP+ + Q YIGI E +
Sbjct: 964 RKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKGIKKYA 1023
Query: 65 LLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSL 124
L++E+ Y+KV++ + +Q ++FVHSRK+T +T++ L+D + ++L F D +
Sbjct: 1024 LMNELTYEKVLEEAGK-NQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKISSEI 1082
Query: 125 IKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNL 184
+ + N++L E+ G+HHAG+ R DR L E LFS+ ++VLVCT+TLAWG+NL
Sbjct: 1083 LLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAWGINL 1142
Query: 185 PAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAYYLR 241
PAHTV+IKGT +Y+ G + +L +D+ GR+GRPQ+D+SG+ IIIT H L YL
Sbjct: 1143 PAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHKNLQLYLS 1202
Query: 242 LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGI 298
L QL IES + ++ + +NAE+ L + N+ +A WL +TY+ IRM P YG+
Sbjct: 1203 LNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGV 1259
Score = 517 (187.1 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 121/303 (39%), Positives = 178/303 (58%)
Query: 837 YISSQTERAVRFIGLSTALANAGDLADWLGVG-EIGLFNFKPSVRPVPLEVHIQGYPGKF 895
+IS + ++ +R +GLS L N D+ +L E G+F F S RPV +E H G K
Sbjct: 959 HISIRRKK-IRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKK 1017
Query: 896 YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLI-QFAASDETPRQFLGMP 954
+ MN+ Y + + +LIFV SR++T T+ LI +F SD + FL
Sbjct: 1018 GIKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSK-FLIDK 1076
Query: 955 EEDLQMVLSQ---VTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
+ +++LS+ V ++ L++ L FG G+HHAGL DR LVE+LF++ IQVLVCTSTL
Sbjct: 1077 KISSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTL 1136
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
AWG+NLPAH VIIKGT Y+ + + D+LQM+GR+GRPQYD+ GKA+I+
Sbjct: 1137 AWGINLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHKN 1196
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
Y E +ES+L + + NAEIV I + +DA+++L TY++ R+ P+
Sbjct: 1197 LQLYLSLNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSL 1256
Query: 1132 YGL 1134
YG+
Sbjct: 1257 YGV 1259
Score = 447 (162.4 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 85/282 (30%), Positives = 166/282 (58%)
Query: 324 LDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSE 383
L+K ++++++K T +G+I+S++Y+ Y S++ YN+ L ++ N+ +++++ + S+E
Sbjct: 1362 LEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLNKYTNEIDLLKIFTMSNE 1421
Query: 384 FENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAA 443
F+NI +RDEE+ EL +++ L P+ VK + + KI+IL+QLY+S ++ + + +D
Sbjct: 1422 FKNIFIRDEEKTELSIIMEKL-PIPVKESINIPYTKINILLQLYLSNIILNGYIINADMV 1480
Query: 444 YISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILR 503
YI + RI R+ FE L++ + L++CK ++R++W PLRQF L E++R
Sbjct: 1481 YIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMWSTMTPLRQFGL-LSTELIR 1539
Query: 504 KLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIG 563
+E++ M + + + + + + + +FP ++L+A + PI +LK+
Sbjct: 1540 IIEKKNITFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHFPKLELNAYIQPINHKILKVD 1599
Query: 564 LAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTK 605
L I P+F + +HG +W+ V D ++ I H +LFTL K
Sbjct: 1600 LNIAPDFIYNPKYHGYFMLFWVFVFDISNESILHYDLFTLKK 1641
Score = 389 (142.0 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 88/269 (32%), Positives = 145/269 (53%)
Query: 961 VLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH 1020
V + D+ LRQ ++ GI H + + ++ +VE LF IQ+L+ + + +N+ A+
Sbjct: 2290 VFDYINDKMLRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYAN 2349
Query: 1021 LVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY 1080
VII T + D+ I +IL+M+ AGR D I + KK +YK F+Y
Sbjct: 2350 NVIILDTIITHFHNNKEEDYSIQNILEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIY 2409
Query: 1081 EPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAE 1140
EP VES++ D L + N EIV TI + +DA+ +L+W++ +RR+ NP YYGL+ E
Sbjct: 2410 EPLTVESNIEDNLPNFLNNEIVMSTIENYQDAIDWLTWSFFYRRIKKNPNYYGLKGISNE 2469
Query: 1141 GLSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLSYVTVSMFGSNIGP 1198
+S YLS L++N E L + C+ + E T ++P LG I+S Y L Y + F +
Sbjct: 2470 HISDYLSELIENNMEILSFANCINIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLS 2529
Query: 1199 DTSLEV--FLHILSGASEYDELPVRHNED 1225
+L+ I+ ++ ++++ HN D
Sbjct: 2530 LKTLKKSRIFEIICLSNIFNDILKIHNYD 2558
Score = 289 (106.8 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 67/189 (35%), Positives = 115/189 (60%)
Query: 663 ELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHT-DNNVLLGAPTGSGKTISA 721
+L+ + LP + ++ + N + NPIQ++++ + ++ + N+L+ APTGSGKT A
Sbjct: 692 KLIHINELPEWT--HEVFSCV-NITKLNPIQSKVYDVAFNKYEENMLICAPTGSGKTNIA 748
Query: 722 ELAMLHLFNT---------QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
L +L++ N+ + D K+VYI+P+KA+V E++ + RL + ++ E+TGD
Sbjct: 749 LLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSFNLRLKC-MNIKVSELTGD 807
Query: 773 YTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
L + II+ TPEK+D ISR W+ + + K+ L+I DEIHLL RG +LE I+
Sbjct: 808 VNLSTKELDDSQIIVMTPEKFDVISRKWNEKILLHKIKLIIFDEIHLLNEMRGNVLESII 867
Query: 833 SRM-RYISS 840
+R+ RY+ +
Sbjct: 868 ARINRYMDN 876
Score = 242 (90.2 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 66/249 (26%), Positives = 126/249 (50%)
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
H+KA +L QAH R LP++ Y+ + K+VL ++ ++I ++ID+ +++ L+ + M +
Sbjct: 2628 HLKAFILLQAHIHRYSLPLN-YIQETKTVLLKAYKLINSLIDVISSNNILNFCLFVMEVS 2686
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLL---DIPKENLQTVIGNFPV 1364
QM+ Q + S L+ P + L+ I V L+ D P++ L +
Sbjct: 2687 QMLTQSMKSTDQSNLYQLPHFDEHLIKKANDLEILDVYDLINAEDEPRDILLKHLNEKQR 2746
Query: 1365 SRLHQDLQRFPRIQVKLRLQRRDIDGENSLT-LNIRMDKMNSWKNTSRAFALRFPKIKDE 1423
S + FP I+V+ + N + LN+ +++ + A +L P K+E
Sbjct: 2747 SEIANVCNIFPIIEVQYEIDLDKSYKVNEIAQLNLTIERDLTDDAVIFAHSLYLPFEKEE 2806
Query: 1424 AWWLVLGNTNTSELYALKRISFSDRLNT---HMELPSGITTFQGMKLVVVSDCYLGFEQE 1480
WW+V+G + L ++K++S +N + ELP T+ + + V++DCY+G +QE
Sbjct: 2807 MWWIVIGIKKMNLLLSIKKLSLLKSVNNIKINFELPDKPNTYD-VVIYVINDCYVGCDQE 2865
Query: 1481 HSIEALVEQ 1489
+ + VE+
Sbjct: 2866 YEFKINVEE 2874
Score = 206 (77.6 bits), Expect = 8.5e-31, Sum P(2) = 8.5e-31
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 149 HAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGT---QLYDPKAGGWR 205
H M ++ + E LF + +++L+ + + +N+ A+ V+I T ++ K +
Sbjct: 2311 HNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTIITHFHNNKEEDYS 2370
Query: 206 DLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEV 265
+L++ AGR D I T K YY + L +ES +L + LN E+
Sbjct: 2371 IQNILEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIYEPLTVESNIEDNLPNFLNNEI 2430
Query: 266 ALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALD 325
+ T+ N ++A WL +++ R+K NP YG+ + I++ +S L+ + L
Sbjct: 2431 VMSTIENYQDAIDWLTWSFFYRRIKKNPNYYGL---KGISNEHISDYLSELIENNMEILS 2487
Query: 326 KAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLR--RHMNDSEVIEMVSHSSE 383
A + +E++ + LG I+S + + Y + +N+ + + + S + E++ S+
Sbjct: 2488 FANCINIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLSLKTLKKSRIFEIICLSNI 2547
Query: 384 FENIV 388
F +I+
Sbjct: 2548 FNDIL 2552
Score = 193 (73.0 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 42/121 (34%), Positives = 69/121 (57%)
Query: 722 ELAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMAL 780
+LA L N D+ K+VYIAPL ++ + +W+ + +M +TGD D+ L
Sbjct: 1819 KLADLLYNNNLIDLIKIVYIAPLDDVIIKTFKNWQ-AMKKTFDLKMCILTGDIQIDMKLL 1877
Query: 781 LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISS 840
+ II+S P +D IS+ W + ++ V I D + LL +G I+E+++SR+RYIS+
Sbjct: 1878 QTHHIILSNPSNYDNISKKWRRKKILQTVSFYIFDHMELLDTVQGGIMEILISRIRYIST 1937
Query: 841 Q 841
Q
Sbjct: 1938 Q 1938
Score = 177 (67.4 bits), Expect = 2.7e-174, Sum P(6) = 2.7e-174
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 615 LSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTA 674
L+F +PI + P Y ++ +SD WL EA + +L LP T+LLDL+PLP+ +
Sbjct: 1675 LTFFLPINDN--PFYIVKVISDKWLECEATINLYLKDLILPSQNFYSTQLLDLQPLPIHS 1732
Query: 675 L----GNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN 730
+ + + + N +FN I TQIF ++ + NVL+ + I AEL M+ +
Sbjct: 1733 IKYDKAHTFFNNIRNLHYFNSIHTQIFSSIFENNGNVLIASSNSKHYLIPAELGMIKILK 1792
Query: 731 TQS---DMKVVYIAPLKAIVRERMNDWK--DRLVSQLGKEMVEMTGDYTPDLMALLSADI 785
+ YI K + + +ND K D L + +++++ Y L D+
Sbjct: 1793 FLHCFYNFINTYIKKEKDVYKI-INDKKLADLLYNNNLIDLIKIV--YIAPL-----DDV 1844
Query: 786 IISTPEKWDGISRNW 800
II T + W + + +
Sbjct: 1845 IIKTFKNWQAMKKTF 1859
Score = 157 (60.3 bits), Expect = 2.0e-78, Sum P(4) = 2.0e-78
Identities = 46/250 (18%), Positives = 117/250 (46%)
Query: 1140 EGLSSYLSRLVQNTFEDLEDSGCVKMTE--DTVEPTMLGTIASQYYLSYVTVSMFGSNIG 1197
E + + ++ + F LE +K + +TV T +G I+S YY+ Y ++ ++ +
Sbjct: 1345 EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLN 1404
Query: 1198 PDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQA 1257
T+ L I + ++E+ + +R E + +++ V + ++ P+ K N+L Q
Sbjct: 1405 KYTNEIDLLKIFTMSNEFKNIFIRDEEKTELSIIMEKLPIPVKES-INIPYTKINILLQL 1463
Query: 1258 HFSRLDLPISDYV--TDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLW 1315
+ S + L + Y+ D+ + ++RI ++ +I + + +M+ + +W
Sbjct: 1464 YLSNIIL--NGYIINADMVYIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMW 1521
Query: 1316 FEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSR-LHQDLQRF 1374
+ L F ++ +L+ + + I T + L + T+ N +++ +++ + F
Sbjct: 1522 STM-TPLRQFGLLSTELIRIIEKKNI-TFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHF 1579
Query: 1375 PRIQVKLRLQ 1384
P++++ +Q
Sbjct: 1580 PKLELNAYIQ 1589
Score = 111 (44.1 bits), Expect = 5.6e-176, Sum P(6) = 5.6e-176
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 847 RFIGLST-ALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK 905
R + LS+ +L N+ D A+W+G + +NF +VR +P+E+++ R SM +
Sbjct: 2023 RILCLSSCSLYNSKDFAEWIGCKKNDYYNFLSTVRDIPIEIYLHAVNIMNKQNRYISMQR 2082
Query: 906 PAYAAI--CTHSPTKP----VLIFVSSRRQTRLTALDLIQFAASD 944
Y I + P K V+IFV+ ++ + ALDLI A +D
Sbjct: 2083 QVYQNIRKLKNIPKKKKMQNVIIFVTDQKLCKTLALDLILSAYND 2127
Score = 57 (25.1 bits), Expect = 1.0e-114, Sum P(4) = 1.0e-114
Identities = 45/223 (20%), Positives = 98/223 (43%)
Query: 1221 RHNEDNHN-EALSQRVRFAVDNNRLD---DPHVKANLLFQAHFSRLDLPISDYVTDLKSV 1276
+HN DN+N + L + +D ++D D + K N++ + + + D+V + ++
Sbjct: 1949 QHNNDNNNNDNLIMSI-LNIDMIKMDNVEDDNNKKNIIHNNNNNNSNSKKDDFVQTINAL 2007
Query: 1277 LDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNND---LL 1333
+ +I I I + + I C+ L+ +D A W+ C ND L
Sbjct: 2008 QNFTIDNIYDYIGL--------NRILCLSSCS-----LYNSKDFAEWI-GCKKNDYYNFL 2053
Query: 1334 GTLRARGISTVQQLLDIP-KENLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDID-GE 1391
T+R I ++I K+N + +++Q++++ I K ++Q I +
Sbjct: 2054 STVRDIPIEIYLHAVNIMNKQNRYISMQR----QVYQNIRKLKNIPKKKKMQNVIIFVTD 2109
Query: 1392 NSLTLNIRMDK-MNSWKNTSRAFALRFPKIKDEAWWLVLGNTN 1433
L + +D ++++ + + F+L F +D+ + +TN
Sbjct: 2110 QKLCKTLALDLILSAYNDNFKYFSL-FENYEDDKYDTSKSSTN 2151
Score = 51 (23.0 bits), Expect = 3.2e-119, Sum P(4) = 3.2e-119
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 1070 PKKSFYKKFLYE--PFPVESSLRDQLHDHFN 1098
P ++FY L + P P+ S D+ H FN
Sbjct: 1713 PSQNFYSTQLLDLQPLPIHSIKYDKAHTFFN 1743
Score = 46 (21.3 bits), Expect = 1.4e-133, Sum P(5) = 1.4e-133
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 948 RQFLGMPEED-LQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVE 994
R+ +P++ +Q V+ VTDQ L +TL + L N K SL E
Sbjct: 2089 RKLKNIPKKKKMQNVIIFVTDQKLCKTLALDLILSAYNDNFKYFSLFE 2136
Score = 44 (20.5 bits), Expect = 2.7e-87, Sum P(4) = 2.7e-87
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 366 RRHMNDSEVIEM--VSHSSEFENIVVRDEEQNELE 398
R ++ND E +E+ +S +E E+I D+ +E E
Sbjct: 228 RGYINDHETMELQELSDDNEEEDISEDDDGDDEEE 262
Score = 39 (18.8 bits), Expect = 1.3e-68, Sum P(6) = 1.3e-68
Identities = 17/77 (22%), Positives = 31/77 (40%)
Query: 634 VSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQ 693
+ + W + +YC L QA+T + K + T G +I + L NF + +
Sbjct: 426 IKNRW---KIYYCT-----LLGQAQTEEEKEEIKKEMKKTEEGQDILDELCNFKNVRKNK 477
Query: 694 TQIFHILYHTDNNVLLG 710
F + + + L G
Sbjct: 478 QSEFSKIIRKEADNLFG 494
Score = 38 (18.4 bits), Expect = 2.6e-54, Sum P(4) = 2.6e-54
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 169 LKVLVCTATLAWGVNL-PAHTVVIKGTQLYDPKAGGWR 205
LK+ + T + + L H +++ YD + WR
Sbjct: 1861 LKMCILTGDIQIDMKLLQTHHIILSNPSNYDNISKKWR 1898
>UNIPROTKB|B4E0P5 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
Length = 595
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 250/591 (42%), Positives = 379/591 (64%)
Query: 835 MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGK 894
MRYISSQ ER +R + LS++L+NA D+A WLG FNF P+VRPVPLE+HIQG+
Sbjct: 1 MRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNIS 60
Query: 895 FYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMP 954
R+ SM KP Y AI HSP KPV++FV SR+QTRLTA+D++ A+D ++FL
Sbjct: 61 HTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHCT 120
Query: 955 EEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWG 1014
E+DL L +++D L++TL G+G H GL+ +R LVE+LF++ IQV+V + +L WG
Sbjct: 121 EKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWG 180
Query: 1015 VNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSF 1074
+N+ AHLVII T+YY+GK YVD+PI D+LQM+G A RP D G+ VI+ KK F
Sbjct: 181 MNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDF 240
Query: 1075 YKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGL 1134
+KKFLYEP PVES L +HDHFNAEIV+ TI +K+DAV YL+WT+L+RR+ NP YY L
Sbjct: 241 FKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL 300
Query: 1135 EDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFG 1193
+ LS +LS LV+ T DLE S C+ + ++ V P LG IA+ YY++Y T+ +F
Sbjct: 301 QGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFS 360
Query: 1194 SNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
++ T + + I+S A+EY+ +P+RH+EDN L+Q+V ++N + +DPHVK NL
Sbjct: 361 MSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNL 420
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQG 1313
L QAH SR+ L ++ +D + +L ++IR+IQA +D+ +++GWLS ++ M L QMV Q
Sbjct: 421 LLQAHLSRMQLS-AELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQA 479
Query: 1314 LWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKE--NLQTVIGNFPVSRLHQDL 1371
+W +DS L P ++ + +G+ +V ++++ E N + + ++ + +
Sbjct: 480 MW-SKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFC 538
Query: 1372 QRFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIK 1421
R+P I++ + +D I + + +++++ + T A FP+ +
Sbjct: 539 NRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQFR 587
Score = 547 (197.6 bits), Expect = 1.8e-51, P = 1.8e-51
Identities = 157/554 (28%), Positives = 277/554 (50%)
Query: 5 QRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
+R IRIV LS++L N +VA +L + F F + RP+PL G + + R
Sbjct: 9 ERPIRIVALSSSLSNAKDVAHWLGCSAT-STFNFHPNVRPVPLELHIQGFNISHTQTRLL 67
Query: 65 LLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSL 124
+++ Y + + +VFV SRK T TA ++ + F + T L
Sbjct: 68 SMAKPVYHAITKHSPK-KPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIP 126
Query: 125 IKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNL 184
+ + S K+ + L G VG H G+ +R L E+LFS G ++V+V + +L WG+N+
Sbjct: 127 YLEKLSDSTLKETL-LNG--VGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNV 183
Query: 185 PAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAYYLR 241
AH V+I TQ Y+ K + D + D+ G A RP D G +I+ K ++ +
Sbjct: 184 AAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKK 243
Query: 242 LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWD 301
L LP+ES + D+ NAE+ T+ N ++A +L +T+L RM NP Y +
Sbjct: 244 FLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL--- 300
Query: 302 EVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY 361
+ I+ LS LV L+++K + +++ + LG IA+++YI Y+++E +
Sbjct: 301 QGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEM-DVAPLNLGMIAAYYYINYTTIELF 359
Query: 362 NEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNK-HGKI 420
+ L +IE++S+++E+ENI +R E N L L Q + P ++ N H K
Sbjct: 360 SMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKV-PHKLNNPKFNDPHVKT 418
Query: 421 SILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVD 480
++L+Q ++SR + L SD I + R+++A + GW +L +E + V
Sbjct: 419 NLLLQAHLSRMQLSA-ELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVT 477
Query: 481 RQIWPHQHPLRQFDKELPAEILRKLEERGAD-LDRLQEMEEKDIGALIRYTPGGRL-VKQ 538
+ +W L+Q +E +++ ++G + + + EME+++ AL++ T V +
Sbjct: 478 QAMWSKDSYLKQLP-HFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVAR 536
Query: 539 YLGYFPSIQLSATV 552
+ +P+I+LS V
Sbjct: 537 FCNRYPNIELSYEV 550
>UNIPROTKB|F1RYR3 [details] [associations]
symbol:LOC100517018 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104562
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
EMBL:CU104757 Ensembl:ENSSSCT00000004816 Uniprot:F1RYR3
Length = 391
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 221/391 (56%), Positives = 292/391 (74%)
Query: 433 IDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQ 492
+D+FSL+SD+AY++ + ARI+RALFE LR+ W M+ +L K +D+++W PLRQ
Sbjct: 1 MDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWTSPLRQ 60
Query: 493 FDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATV 552
F LP IL +LEE+ +D+L++M + +IG ++ + G VKQ + PS+ + A++
Sbjct: 61 FSV-LPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASI 119
Query: 553 SPITRTVLKIGLAITPEFTWKDHFHGAA-QRWWIIVQDSESDHIYHSELF-TLTKRMARG 610
PITRTVL++ L+I P+FTW D HG + WWI V+D +DHIYHSE F L K++
Sbjct: 120 QPITRTVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISK 179
Query: 611 ETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPL 670
E Q L FT+PIFEP P QYYIRAVSD WL AEA I+F +L LP+ HTELLDL+PL
Sbjct: 180 EAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPL 239
Query: 671 PVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN 730
PVTALG YEALYNFSHFNP+QTQIFH LYHTD NVLLGAPTGSGKT++AELA+ +FN
Sbjct: 240 PVTALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFN 299
Query: 731 TQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTP 790
K VYIAPLKA+VRERM+DWK R+ +LGK+++E+TGD TPD+ ++ AD+I++TP
Sbjct: 300 KYPTSKAVYIAPLKALVRERMDDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTP 359
Query: 791 EKWDGISRNWHSRNYVKKVGLMILDEIHLLG 821
EKWDG+SR+W +RNYVK+V ++I+DEIHLLG
Sbjct: 360 EKWDGVSRSWQNRNYVKQVTILIIDEIHLLG 390
>UNIPROTKB|F1SU36 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GeneTree:ENSGT00640000091272 EMBL:CU896688
Ensembl:ENSSSCT00000008906 OMA:QSSKKEF Uniprot:F1SU36
Length = 553
Score = 1062 (378.9 bits), Expect = 3.3e-107, P = 3.3e-107
Identities = 206/546 (37%), Positives = 337/546 (61%)
Query: 949 QFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCT 1008
+FL E+DL L ++ D L++TL G+G H GL+ +R LVE+LF++ IQV+V +
Sbjct: 5 RFLHCTEKDLIPYLEKLGDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVAS 64
Query: 1009 STLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVH 1068
+L WG+N+ AHLVII T+YY+GK YVD+PI D+LQM+GRA RP D G+ VI+
Sbjct: 65 RSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGRANRPLQDDEGRCVIMCQ 124
Query: 1069 EPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAIN 1128
KK F+KKFLYEP PVES L +HDHFNAEIV+ TI +K+DAV YL+WT+L+RR+ N
Sbjct: 125 GSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQN 184
Query: 1129 PAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYV 1187
P YY L+ LS +LS LV+ T DLE S C+ + ++ V P LG IA+ YY++Y
Sbjct: 185 PNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYT 244
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ +F ++ T + + I+S A+EY+ +P+RH+EDN L+Q+V ++N + +DP
Sbjct: 245 TIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDP 304
Query: 1248 HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL 1307
HVK NLL QAH SR+ L ++ +D + +L ++IR+IQA +D+ +++GWLS ++ M L
Sbjct: 305 HVKTNLLLQAHLSRMQLS-AELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELA 363
Query: 1308 QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKE--NLQTVIGNFPVS 1365
QMV Q +W +DS L P ++ + +G+ +V ++++ E N + + ++
Sbjct: 364 QMVTQAMW-SKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLSDSQIA 422
Query: 1366 RLHQDLQRFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEA 1424
+ + R+P I++ + +D I + + +++++ + T A FP+ ++E
Sbjct: 423 DVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQKREEG 480
Query: 1425 WWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIE 1484
WW+V+G+ ++ L ++KR++ + ++ + T L +SD Y+G +QE+
Sbjct: 481 WWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFS 540
Query: 1485 ALVEQS 1490
V+++
Sbjct: 541 VDVKEA 546
Score = 508 (183.9 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 140/522 (26%), Positives = 264/522 (50%)
Query: 145 VGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGW 204
VG H G+ +R L E+LFS G ++V+V + +L WG+N+ AH V+I TQ Y+ K +
Sbjct: 34 VGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAY 93
Query: 205 RDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNL 261
D + D+ GRA RP D G +I+ K ++ + L LP+ES + D+
Sbjct: 94 VDYPIYDVLQMVGRANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHF 153
Query: 262 NAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAA 321
NAE+ T+ N ++A +L +T+L RM NP Y + + I+ LS LV
Sbjct: 154 NAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNL---QGISHRHLSDHLSELVEQTL 210
Query: 322 RALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHS 381
L+++K + +++ + LG IA+++YI Y+++E ++ L +IE++S++
Sbjct: 211 SDLEQSKCISIEDEM-DVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNA 269
Query: 382 SEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNK-HGKISILIQLYISRGWIDTFSLVS 440
+E+ENI +R E N L L Q + P ++ N H K ++L+Q ++SR + L S
Sbjct: 270 AEYENIPIRHHEDNLLRQLAQKV-PHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQS 327
Query: 441 DAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAE 500
D I + R+++A + GW +L +E + V + +W L+Q +E
Sbjct: 328 DTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLP-HFTSE 386
Query: 501 ILRKLEERGAD-LDRLQEMEEKDIGALIRYTPGGRL-VKQYLGYFPSIQLSATVSPITRT 558
+++ ++G + + + EME+++ AL++ + V ++ +P+I+LS V + +
Sbjct: 387 HIKRCTDKGVESVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEV--VDKD 444
Query: 559 VLKIG--LAITPEFTWKDHFHGAA------QR----WWIIVQDSESDHIYHSELFTLTKR 606
++ G + + + ++ G Q+ WW+++ D++S+ + + TL ++
Sbjct: 445 SIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQK 504
Query: 607 MARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCIS 648
A+ KL F P H Y + +SD+++ + Y S
Sbjct: 505 -AK---VKLDFVAPATGAH--NYTLYFMSDAYMGCDQEYKFS 540
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 933 (333.5 bits), Expect = 6.8e-93, P = 6.8e-93
Identities = 248/760 (32%), Positives = 392/760 (51%)
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQS----DMKVVYIA 741
F +FN IQ++ F L +TD N ++ APTGSGKT+ ELA+ L +MKVVY+A
Sbjct: 9 FPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEAPLPWLNMKVVYMA 68
Query: 742 PLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRNW 800
P+KA+ +R +DWK++ +G E+TGD DL + A+II++TPEKWD ++R W
Sbjct: 69 PIKALCSQRFDDWKEKF-GPIGLTCKELTGDTVMDDLFEIQHANIIMTTPEKWDSMTRKW 127
Query: 801 HSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISSQT---ERA----VRFIGLS 852
++++ V L ++DE+H++ E RGP LEV+VSRM+ + S + E A VRF+ +S
Sbjct: 128 RDNSFIQLVRLFLIDEVHVIKDENRGPTLEVVVSRMKTVQSLSKTLENASPAPVRFVAVS 187
Query: 853 TALANAGDLADWLGVGEIGLFNFK--PSVRPVPLEVHIQGYPGKFYCPRMN---SMNKPA 907
+ NA D+A+WL GE K S RPV L+ + G+P ++N
Sbjct: 188 ATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPSSSNQTEFKFDLALNYKV 247
Query: 908 YAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTD 967
Y+ I T+S KP L+F ++R+ + A L++ A T Q L LQ + D
Sbjct: 248 YSVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIITVEQKLR-----LQKSAYSIRD 302
Query: 968 QNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGT 1027
L+ TL +G+G HHAG+ DR LVEELF + + VL TSTLA GVNLPAHLV+IK T
Sbjct: 303 SKLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVVIKST 362
Query: 1028 EYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVES 1087
+Y G + ++ TDILQM+GRAGRPQ+D AVI+ + Y + L VES
Sbjct: 363 MHYTGGA--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLACNDTVES 420
Query: 1088 SLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYG-LEDTEAEGLSSYL 1146
SL L +H NAEIV TI A+ ++ T L+ R NP++YG + +G+ + L
Sbjct: 421 SLHRHLIEHLNAEIVLHTITDVSIALDWIRSTLLYIRALKNPSHYGFISGLNKDGIEAKL 480
Query: 1147 SRLVQNTFEDLEDSGCVKMTED-TVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVF 1205
L +DL +KM ED T G + + YY+++ TV F + G +T L
Sbjct: 481 QELCLKNLKDLSSLDLIKMDEDLNFRSTEAGRLMAWYYITFETVKKFCAISGKET-LSDL 539
Query: 1206 LHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKANLLFQAHFS 1260
+ ++S SE+ ++ +R +E L++ +RF ++ R+ +K N L QA
Sbjct: 540 ISMISSCSEFLDVQLRISEKRTLNTLNKDPNRITIRFPMEG-RIKTREMKVNCLIQAQLG 598
Query: 1261 RLDLPISDYVT--DLKSVLDQSIRIIQAMID-ICANSGWLSSSITCMHLLQMVMQGLWFE 1317
+ PI D+ D + RI + + D + A + + + L + LW
Sbjct: 599 CI--PIQDFALTQDTSKIFRNGSRIAKWLSDFVTAQEQKFAVLLNSVILAKCFKCKLWEN 656
Query: 1318 QDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDLQRFP 1375
+ L T+ G+++ +++ + L+ ++ P +++ + + P
Sbjct: 657 SQHVSKQLDKIGISLSNTMVNAGLTSFKKIEEANARELELILNRHPPFGTQIKEAVMYLP 716
Query: 1376 RIQVKLRLQRR--DIDGENSLTLNIRMDKMNSWKNTSRAF 1413
+ +++ R D E +T+ +R + K T+ F
Sbjct: 717 KYELEAEQIARYSDTKAEILVTIILRNFEQLQTKRTAPDF 756
Score = 528 (190.9 bits), Expect = 4.6e-47, P = 4.6e-47
Identities = 163/558 (29%), Positives = 271/558 (48%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEPNFAARNELL 66
+R V +SAT+PN ++A++L + D S+RP+ L + +G P+ + + E
Sbjct: 181 VRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGF--PSSSNQTEFK 238
Query: 67 SEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQL 122
++ YK V+ + +VF +RK + A LV A+ +E Q
Sbjct: 239 FDLALNYKVYSVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIITVE--------QK 290
Query: 123 SLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV 182
++K R+ L + VG HHAGM SDR L E LF+ G L VL T+TLA GV
Sbjct: 291 LRLQKSAYSIRDSKLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGV 350
Query: 183 NLPAHTVVIKGTQLYDPKA-GGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLR 241
NLPAH VVIK T Y A + + +L + GRAGRPQFD + +I+T Y++
Sbjct: 351 NLPAHLVVIKSTMHYTGGAFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQ 410
Query: 242 LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWD 301
+L +ES L ++LNAE+ L T+T+V A W+ T L IR NP YG +
Sbjct: 411 MLACNDTVESSLHRHLIEHLNAEIVLHTITDVSIALDWIRSTLLYIRALKNPSHYG--FI 468
Query: 302 EVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY 361
+ + K + L + L +++ DE NF TE GR+ + +YI + +V+ +
Sbjct: 469 SGLNKDGIEAKLQELCLKNLKDLSSLDLIKMDEDL-NFRSTEAGRLMAWYYITFETVKKF 527
Query: 362 NEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK----GGPSNKH 417
+ + S++I M+S SEF ++ +R E+ L TL + + ++ G +
Sbjct: 528 CAISGKETL-SDLISMISSCSEFLDVQLRISEKRTLNTLNKDPNRITIRFPMEGRIKTRE 586
Query: 418 GKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRAL--FETCLRRGWCEMSLFMLEY 475
K++ LIQ + I F+L D + I + +RI + L F T + + + L +
Sbjct: 587 MKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRIAKWLSDFVTAQEQKFAVL-LNSVIL 645
Query: 476 CKAVDRQIWPH-QHPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGALI-RYTPG 532
K ++W + QH +Q DK + + + G +++E +++ ++ R+ P
Sbjct: 646 AKCFKCKLWENSQHVSKQLDK-IGISLSNTMVNAGLTSFKKIEEANARELELILNRHPPF 704
Query: 533 GRLVKQYLGYFPSIQLSA 550
G +K+ + Y P +L A
Sbjct: 705 GTQIKEAVMYLPKYELEA 722
>UNIPROTKB|I3LAA7 [details] [associations]
symbol:I3LAA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026
Ensembl:ENSSSCT00000023674 OMA:ENDQDET Uniprot:I3LAA7
Length = 268
Score = 921 (329.3 bits), Expect = 1.4e-91, P = 1.4e-91
Identities = 164/254 (64%), Positives = 213/254 (83%)
Query: 751 MNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVG 810
M+DWK R+ +LGK+++E+TGD TPD+ ++ AD+I++TPEKWDG+SR+W +RNYVK+V
Sbjct: 1 MDDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVT 60
Query: 811 LMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI 870
++I+DEIHLLG ERGP+LEVIVSR +ISS TE+ VR +GLSTALANA DLADWL + ++
Sbjct: 61 ILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIRQM 120
Query: 871 GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQT 930
GLFNF+PSVRPVPLEVHIQG+PG+ YCPRM SMNKP + AI +HSP KPVLIFVSSRRQT
Sbjct: 121 GLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQT 180
Query: 931 RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDR 990
RLTAL+LI F A++E P+Q+L M E +++ ++ + D NL+ TL FGIG+HHAGL+++DR
Sbjct: 181 RLTALELIAFLATEEDPKQWLNMDEREMENIIGTIRDSNLKLTLAFGIGMHHAGLHERDR 240
Query: 991 SLVEELFANNKIQV 1004
VEELF N K+QV
Sbjct: 241 KTVEELFVNCKVQV 254
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARN 63
T++ +RIVGLS L N ++A +L + +MGLF F S RP+PL G ++ R
Sbjct: 92 TEKPVRIVGLSTALANARDLADWLNIR-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRM 150
Query: 64 ELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVF-NNDTHPQL 122
+++ ++ + S ++FV SR+ T TA +L+ ED + + N D
Sbjct: 151 ASMNKPTFQ-AIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREME 209
Query: 123 SLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLF 164
++I ++ N L FG +G+HHAG+ DR E LF
Sbjct: 210 NII--GTIRDSNLKLTLAFG--IGMHHAGLHERDRKTVEELF 247
>UNIPROTKB|I3LT20 [details] [associations]
symbol:LOC100525691 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000023488 Uniprot:I3LT20
Length = 354
Score = 860 (307.8 bits), Expect = 5.3e-85, P = 5.3e-85
Identities = 161/332 (48%), Positives = 232/332 (69%)
Query: 533 GRLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSES 592
G+ + +Y+ FP ++LS + PITR+ LK+ L ITP+F W + HG+++ +WI+V+D +S
Sbjct: 5 GKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVEDVDS 64
Query: 593 DHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNL 652
+ I H E F L + A+ E ++F VP+FEP PPQY+IR VSD WL E +SF +L
Sbjct: 65 EVILHHEYFLLKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHL 123
Query: 653 ALPQARTSHTELLDLKPLPVTALGNNIYEALYN--FSHFNPIQTQIFHILYHTDNNVLLG 710
LP+ TELLDL+PLPV+AL N+ +E+LY F FNPIQTQ+F+ +Y++D+NV +G
Sbjct: 124 ILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVG 183
Query: 711 APTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMT 770
APTGSGKTI AE A+L + S+ + VYI P++A+ + DW ++ +L K++V +T
Sbjct: 184 APTGSGKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLT 243
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEV 830
G+ + DL L +IIISTPEKWD +SR W R V+ + L ++DE+HL+G E GP+LEV
Sbjct: 244 GETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVHLIGGENGPVLEV 303
Query: 831 IVSRMRYISSQTERAVRFIGLSTALANAGDLA 862
I SRMRYISSQ ER +R + LS++L+NA D+A
Sbjct: 304 ICSRMRYISSQIERPIRIVALSSSLSNAKDVA 335
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 882 (315.5 bits), Expect = 5.4e-85, P = 5.4e-85
Identities = 268/877 (30%), Positives = 421/877 (48%)
Query: 570 FTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQY 629
F D+ HG+A D+E D S T+ M +G+++ S + F+ +
Sbjct: 167 FKISDNIHGSAYS-----NDNELDSHIGSVKIVQTE-MNKGKSRNYSNSKQKFQYSANVF 220
Query: 630 YIR-AVSDSWLHAEAFYCISFHNLALPQARTSHTE--LLDLKPLPVTALGNNIYEALYNF 686
A S S + F SF P TE L LK VT + F
Sbjct: 221 TANNAFSASEIGEGMFKAPSFSVAFQPHDIQEVTENGLGSLKA--VTEIPAKFRSIFKEF 278
Query: 687 SHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQS----DMKVVYIAP 742
+FN IQ++ F L +TD N ++ APTGSGKT+ ELA+ L ++K+VY+AP
Sbjct: 279 PYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAP 338
Query: 743 LKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRNWH 801
+KA+ +R +DWK++ +G E+TGD DL + A II++TPEKWD ++R W
Sbjct: 339 IKALCSQRFDDWKEKF-GPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWR 397
Query: 802 SRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISS------QTERAV--RFIGLS 852
+ V+ V L ++DE+H++ E RGP LEV+VSRM+ + S T A+ RF+ +S
Sbjct: 398 DNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVS 457
Query: 853 TALANAGDLADWLGVGEIGLFNFK--PSVRPVPLEVHIQGYPGKFYCPRMN---SMNKPA 907
+ NA D+A+WL GE K S RPV L+ + G+P ++N
Sbjct: 458 ATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNYKI 517
Query: 908 YAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTD 967
+ I +S KP L+F ++R+ + A L++ A T Q ++ LQ V D
Sbjct: 518 ASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQ-----KQRLQKYAYSVRD 572
Query: 968 QNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGT 1027
LR L+ G HHAG+ DR +VE F + VL TSTLA GVNLPAHLV+IK T
Sbjct: 573 SKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKST 632
Query: 1028 EYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVES 1087
+Y G + ++ TDILQM+GRAGRPQ+D AVI+ + Y + L VES
Sbjct: 633 MHYAGGL--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVES 690
Query: 1088 SLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLED-TEAEGLSSYL 1146
SL L +H NAEIV TI AV ++ T L+ R NP++YG +G+ + L
Sbjct: 691 SLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKL 750
Query: 1147 SRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVF 1205
L DL +KM E +PT G + + YY+++ TV F + G +T L
Sbjct: 751 QELCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITFETVKKFYTISGKET-LSDL 809
Query: 1206 LHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKANLLFQAHFS 1260
+ +++G E+ ++ +R NE L++ +RF ++ R+ +K N L QA
Sbjct: 810 VTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPMEG-RIKTREMKVNCLIQAQLG 868
Query: 1261 RLDLPISDYVT--DLKSVLDQSIRIIQAMID-ICANSGWLSSSITCMHLLQMVMQGLWFE 1317
+ PI D+ D + RI + + D + A + + + L + LW
Sbjct: 869 CI--PIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLLNSLILAKCFRCKLWEN 926
Query: 1318 QDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDLQRFP 1375
+ L + G+++ +++ + L+ ++ P +++ + + P
Sbjct: 927 SLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDARELELILNRHPPFGTQIKETVMYLP 986
Query: 1376 RIQVKLRLQRR--DIDGENSLTLNIRMDKMNSWKNTS 1410
+ ++K+ R D E +T+ +R + K T+
Sbjct: 987 KYELKVEQITRYSDTTAEILVTVILRNFEQLQTKRTA 1023
Score = 490 (177.5 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 163/573 (28%), Positives = 270/573 (47%)
Query: 3 STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEPNFAA 61
ST +R V +SAT+PN ++A++L + D S+RP+ L + +G P +
Sbjct: 446 STAIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGF--PCSSN 503
Query: 62 RNELLSEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNND 117
+ E ++ YK V+ +VF +RK + A LV A+ +E
Sbjct: 504 QTEFKFDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVE----- 558
Query: 118 THPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTAT 177
Q ++K R+ L ++ HHAGM SDR + E F+ G L VL T+T
Sbjct: 559 ---QKQRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTST 615
Query: 178 LAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIIITSH 233
LA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+T
Sbjct: 616 LAMGVNLPAHLVVIKSTMHY---AGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRL 672
Query: 234 DKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNP 293
Y+++L + +ES L ++LNAE+ L T+T+V A W+ T L IR NP
Sbjct: 673 STRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNP 732
Query: 294 LAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI 353
YG + + K + L L +++ DE NF TE GR+ + +YI
Sbjct: 733 SHYGFA--SGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDE-GVNFKPTEAGRLMAWYYI 789
Query: 354 QYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK--- 410
+ +V+ + + + S+++ +++ EF +I +R E+ L TL + + ++
Sbjct: 790 TFETVKKFYTISGKETL-SDLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPM 848
Query: 411 -GGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRAL--FETCLRRGWCE 467
G + K++ LIQ + I F+L D A I +RI R L F + +
Sbjct: 849 EGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAV 908
Query: 468 MSLFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGA 525
+ L L K ++W + H +Q +K + + + G +++E + +++
Sbjct: 909 L-LNSLILAKCFRCKLWENSLHVSKQLEK-IGITLSNAIVNAGLTSFKKIEETDARELEL 966
Query: 526 LI-RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
++ R+ P G +K+ + Y P +L V ITR
Sbjct: 967 ILNRHPPFGTQIKETVMYLPKYELK--VEQITR 997
Score = 39 (18.8 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 632 RAVSDSWLHAEAFYCISFHNLALPQ-ARTSHTEL 664
R +S+S++ + IS N A+P+ + +S T+L
Sbjct: 1320 REMSNSFVSSHEMSDISLSNSAMPKFSASSMTKL 1353
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 888 (317.7 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 253/810 (31%), Positives = 404/810 (49%)
Query: 633 AVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLP-VTALGNNIYEALYNFSHFNP 691
AVS S + + F +F + P TE DL L VT + F +FN
Sbjct: 227 AVSASEIREDIFKGPTFSVASQPHEVQGVTEN-DLDSLKAVTEIPAKFRSIFKEFPYFNY 285
Query: 692 IQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQ----SDMKVVYIAPLKAIV 747
IQ++ F L +TD N ++ APTGSGKT+ ELA+ L S++K+VY+AP+KA+
Sbjct: 286 IQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALC 345
Query: 748 RERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRNWHSRNYV 806
+R +DWK++ +G E+TGD DL + A II++TPEKWD ++R W + V
Sbjct: 346 SQRFDDWKEKF-GPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLV 404
Query: 807 KKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISS---QTERA----VRFIGLSTALANA 858
+ V L ++DE+H++ E RGP LEV+VSRM+ + S +E + +RF+ +S + NA
Sbjct: 405 QLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSATIPNA 464
Query: 859 GDLADWLGVGEIGLFNFKPSV--RPVPLEVHIQGYP-GKFYCP-RMN-SMNKPAYAAICT 913
D+A+WL GE K RPV L+ + G+P G + + ++N I T
Sbjct: 465 EDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIAGVIRT 524
Query: 914 HSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT 973
+S KP L+F ++R+ + A L++ A Q ++ LQ + D LR
Sbjct: 525 YSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVEQ-----KQRLQKYAYSIRDSKLRDI 579
Query: 974 LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGK 1033
L G+ HHAG+ DR +VE F + VL TSTLA GVNLPAHLV+IK T +Y G
Sbjct: 580 LIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGG 639
Query: 1034 TKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQL 1093
+ ++ TDILQM+GRAGRPQ+D AVI+ K Y + L VESSL L
Sbjct: 640 M--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHL 697
Query: 1094 HDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLED-TEAEGLSSYLSRLVQN 1152
+H NAEIV TI A+ ++ T L+ R NP++YG +G+ + L L
Sbjct: 698 IEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLK 757
Query: 1153 TFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSG 1211
DL ++M ED +PT G + + YY+++ TV F + G +T L++ + ++S
Sbjct: 758 NLHDLSSLDLIRMDEDVNFKPTEAGRLMAWYYITFETVKKFCTISGKETLLDL-VTMISS 816
Query: 1212 ASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPI 1266
E+ ++ +R NE L++ +RF ++ R+ +K N L QA + PI
Sbjct: 817 CKEFVDVQLRINEKKILNTLNKDPNRVTIRFPMEG-RIKTREMKINCLIQAQLGCI--PI 873
Query: 1267 SDYVT--DLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWM 1324
D+ D+ + RI + + D A + + + L + LW
Sbjct: 874 QDFALTQDISKIFRNGSRITRWLSDFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQ 933
Query: 1325 FPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDLQRFPRIQVKLR 1382
+ L + G+++ +++ + L+ ++ P +++ + + P+ +V++
Sbjct: 934 LEKIGITLSNAMVNAGLTSFKKIEETDARELELILNRHPPFGTQIKETVMYLPKYEVEVE 993
Query: 1383 LQRR--DIDGENSLTLNIRMDKMNSWKNTS 1410
R D E +T+ +R + + TS
Sbjct: 994 QIARYSDTMAEILVTIILRNFEQLQARRTS 1023
Score = 479 (173.7 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 162/571 (28%), Positives = 268/571 (46%)
Query: 3 STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEPNFAA 61
ST +R V +SAT+PN ++A++L + D +RP+ L + +G P +
Sbjct: 447 STVIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGF--PCGSN 504
Query: 62 RNELLSEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNND 117
+ E ++ YK V+ + +VF +RK + A LV A+ +E
Sbjct: 505 QTEFKFDLTLNYKIAGVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVE----- 559
Query: 118 THPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTAT 177
Q ++K R+ L ++ V HHAGM SDR + E F+ G L VL T+T
Sbjct: 560 ---QKQRLQKYAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTST 616
Query: 178 LAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIIITSH 233
LA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+T
Sbjct: 617 LAMGVNLPAHLVVIKSTMHY---AGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTRL 673
Query: 234 DKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNP 293
Y+++L +ES L ++LNAE+ L T+T+V A W+ T L IR NP
Sbjct: 674 STKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNP 733
Query: 294 LAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI 353
YG + + K + L L ++R DE NF TE GR+ + +YI
Sbjct: 734 SHYGFA--SGLNKDGIEAKLQELCLKNLHDLSSLDLIRMDEDV-NFKPTEAGRLMAWYYI 790
Query: 354 QYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK--- 410
+ +V+ + + + +++ M+S EF ++ +R E+ L TL + V ++
Sbjct: 791 TFETVKKFCTISGKETL-LDLVTMISSCKEFVDVQLRINEKKILNTLNKDPNRVTIRFPM 849
Query: 411 -GGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMS 469
G + KI+ LIQ + I F+L D + I + +RI R L + + +
Sbjct: 850 EGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIFRNGSRITRWLSDFVAVQEKFAIL 909
Query: 470 LFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGALI 527
L L K ++W + H +Q +K + + + G +++E + +++ ++
Sbjct: 910 LNSLILAKCFRCKLWENSLHVSKQLEK-IGITLSNAMVNAGLTSFKKIEETDARELELIL 968
Query: 528 -RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
R+ P G +K+ + Y P ++ V I R
Sbjct: 969 NRHPPFGTQIKETVMYLPKYEVE--VEQIAR 997
Score = 39 (18.8 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 1043 TDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIV 1102
++ L + G + + DQ V + EP + K+ L F + + + D D E+
Sbjct: 1224 SECLNIPGLSVMEERDQRDFCVKVQQEPSEYEDKEVLNVNFELGNEVWDDFDDENLLEVT 1283
Query: 1103 S 1103
S
Sbjct: 1284 S 1284
Score = 38 (18.4 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 107 RYEDLEVFNNDTHPQLSLIKKDVMK 131
+Y D+ +F S I++D+ K
Sbjct: 215 QYSDINMFTASNAVSASEIREDIFK 239
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 888 (317.7 bits), Expect = 3.0e-84, Sum P(2) = 3.0e-84
Identities = 253/810 (31%), Positives = 404/810 (49%)
Query: 633 AVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLP-VTALGNNIYEALYNFSHFNP 691
AVS S + + F +F + P TE DL L VT + F +FN
Sbjct: 227 AVSASEIREDIFKGPTFSVASQPHEVQGVTEN-DLDSLKAVTEIPAKFRSIFKEFPYFNY 285
Query: 692 IQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQ----SDMKVVYIAPLKAIV 747
IQ++ F L +TD N ++ APTGSGKT+ ELA+ L S++K+VY+AP+KA+
Sbjct: 286 IQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALC 345
Query: 748 RERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRNWHSRNYV 806
+R +DWK++ +G E+TGD DL + A II++TPEKWD ++R W + V
Sbjct: 346 SQRFDDWKEKF-GPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLV 404
Query: 807 KKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISS---QTERA----VRFIGLSTALANA 858
+ V L ++DE+H++ E RGP LEV+VSRM+ + S +E + +RF+ +S + NA
Sbjct: 405 QLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSATIPNA 464
Query: 859 GDLADWLGVGEIGLFNFKPSV--RPVPLEVHIQGYP-GKFYCP-RMN-SMNKPAYAAICT 913
D+A+WL GE K RPV L+ + G+P G + + ++N I T
Sbjct: 465 EDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIAGVIRT 524
Query: 914 HSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT 973
+S KP L+F ++R+ + A L++ A Q ++ LQ + D LR
Sbjct: 525 YSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVEQ-----KQRLQKYAYSIRDSKLRDI 579
Query: 974 LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGK 1033
L G+ HHAG+ DR +VE F + VL TSTLA GVNLPAHLV+IK T +Y G
Sbjct: 580 LIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGG 639
Query: 1034 TKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQL 1093
+ ++ TDILQM+GRAGRPQ+D AVI+ K Y + L VESSL L
Sbjct: 640 M--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHL 697
Query: 1094 HDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLED-TEAEGLSSYLSRLVQN 1152
+H NAEIV TI A+ ++ T L+ R NP++YG +G+ + L L
Sbjct: 698 IEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLK 757
Query: 1153 TFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSG 1211
DL ++M ED +PT G + + YY+++ TV F + G +T L++ + ++S
Sbjct: 758 NLHDLSSLDLIRMDEDVNFKPTEAGRLMAWYYITFETVKKFCTISGKETLLDL-VTMISS 816
Query: 1212 ASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPI 1266
E+ ++ +R NE L++ +RF ++ R+ +K N L QA + PI
Sbjct: 817 CKEFVDVQLRINEKKILNTLNKDPNRVTIRFPMEG-RIKTREMKINCLIQAQLGCI--PI 873
Query: 1267 SDYVT--DLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWM 1324
D+ D+ + RI + + D A + + + L + LW
Sbjct: 874 QDFALTQDISKIFRNGSRITRWLSDFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQ 933
Query: 1325 FPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDLQRFPRIQVKLR 1382
+ L + G+++ +++ + L+ ++ P +++ + + P+ +V++
Sbjct: 934 LEKIGITLSNAMVNAGLTSFKKIEETDARELELILNRHPPFGTQIKETVMYLPKYEVEVE 993
Query: 1383 LQRR--DIDGENSLTLNIRMDKMNSWKNTS 1410
R D E +T+ +R + + TS
Sbjct: 994 QIARYSDTMAEILVTIILRNFEQLQARRTS 1023
Score = 479 (173.7 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 162/571 (28%), Positives = 268/571 (46%)
Query: 3 STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEPNFAA 61
ST +R V +SAT+PN ++A++L + D +RP+ L + +G P +
Sbjct: 447 STVIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGF--PCGSN 504
Query: 62 RNELLSEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNND 117
+ E ++ YK V+ + +VF +RK + A LV A+ +E
Sbjct: 505 QTEFKFDLTLNYKIAGVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVE----- 559
Query: 118 THPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTAT 177
Q ++K R+ L ++ V HHAGM SDR + E F+ G L VL T+T
Sbjct: 560 ---QKQRLQKYAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTST 616
Query: 178 LAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIIITSH 233
LA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+T
Sbjct: 617 LAMGVNLPAHLVVIKSTMHY---AGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTRL 673
Query: 234 DKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNP 293
Y+++L +ES L ++LNAE+ L T+T+V A W+ T L IR NP
Sbjct: 674 STKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNP 733
Query: 294 LAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI 353
YG + + K + L L ++R DE NF TE GR+ + +YI
Sbjct: 734 SHYGFA--SGLNKDGIEAKLQELCLKNLHDLSSLDLIRMDEDV-NFKPTEAGRLMAWYYI 790
Query: 354 QYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK--- 410
+ +V+ + + + +++ M+S EF ++ +R E+ L TL + V ++
Sbjct: 791 TFETVKKFCTISGKETL-LDLVTMISSCKEFVDVQLRINEKKILNTLNKDPNRVTIRFPM 849
Query: 411 -GGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMS 469
G + KI+ LIQ + I F+L D + I + +RI R L + + +
Sbjct: 850 EGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIFRNGSRITRWLSDFVAVQEKFAIL 909
Query: 470 LFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGALI 527
L L K ++W + H +Q +K + + + G +++E + +++ ++
Sbjct: 910 LNSLILAKCFRCKLWENSLHVSKQLEK-IGITLSNAMVNAGLTSFKKIEETDARELELIL 968
Query: 528 -RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
R+ P G +K+ + Y P ++ V I R
Sbjct: 969 NRHPPFGTQIKETVMYLPKYEVE--VEQIAR 997
Score = 38 (18.4 bits), Expect = 3.0e-84, Sum P(2) = 3.0e-84
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 107 RYEDLEVFNNDTHPQLSLIKKDVMK 131
+Y D+ +F S I++D+ K
Sbjct: 215 QYSDINMFTASNAVSASEIREDIFK 239
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 870 (311.3 bits), Expect = 1.1e-83, P = 1.1e-83
Identities = 237/760 (31%), Positives = 378/760 (49%)
Query: 672 VTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNT 731
VT + F +FN IQ++ F L +TD NV++ APTGSGKT+ ELA+ L
Sbjct: 266 VTEIPAKFRSVFKEFPYFNYIQSKAFDDLLYTDRNVVVCAPTGSGKTVMFELAITRLLME 325
Query: 732 Q----SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADII 786
S++K+VY+AP+KA+ +R +DWK++ +G E+TGD DL + A II
Sbjct: 326 VPLPWSNIKIVYMAPIKALCSQRFDDWKEKF-GPIGLNCKELTGDTVMDDLFEIQHAHII 384
Query: 787 ISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMR---YISSQT 842
++TPEKWD ++R W + V+ V L ++DE+H++ E RGP LEV+VSRM+ ++S
Sbjct: 385 MTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQFLSHAV 444
Query: 843 ERA-----VRFIGLSTALANAGDLADWLGVGEIGLFNFKPSV--RPVPLEVHIQGYPGKF 895
E +RF+ +S + NA D+A+WL GE K RPV L + G+P
Sbjct: 445 ENPRNIIPMRFVAVSATIPNAEDIAEWLSDGERSAICLKMDEKHRPVKLRKVVLGFPCSN 504
Query: 896 YCPRMN---SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
++N + + T+S KP L+F ++R+ + A L++ A T Q
Sbjct: 505 NQTEFKFDLTLNYKIASVVQTYSDQKPTLVFCATRKGVQQAASILVKDAKFIMTVEQ--- 561
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
++ L + D LR L G+ HHAG+ DR +VE F + VL TSTLA
Sbjct: 562 --KQRLHKCAYSIRDSKLRDLLIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLA 619
Query: 1013 WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
GVNLPAHLV+IK T +Y G + ++ TDILQM+GRAGRPQ+D AVI+ K
Sbjct: 620 MGVNLPAHLVVIKSTMHYAGGM--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTK 677
Query: 1073 SFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYY 1132
Y + L VESSL L +H NAEIV TI A+ ++ T L+ R NP++Y
Sbjct: 678 EKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPSHY 737
Query: 1133 GLED-TEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED-TVEPTMLGTIASQYYLSYVTVS 1190
G +G+ S L L DL +KM ED +PT G + + YY+++ TV
Sbjct: 738 GFASGLNKDGIESKLQELCLKNLNDLSSLDLIKMDEDINFKPTEAGRLMAWYYVTFETVK 797
Query: 1191 MFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLD 1245
F + G +T L + +++ E+ ++ +R NE L++ +RF ++ ++
Sbjct: 798 KFCTISGKET-LSDLVTMIASCKEFLDVQLRINEKKTLNTLNKDPNRITIRFPMEG-KIK 855
Query: 1246 DPHVKANLLFQAHFSRLDLPISDYVT--DLKSVLDQSIRIIQAMIDICANSGWLSSSITC 1303
+K N L QA + PI D+ D + RI + + D A + +
Sbjct: 856 TREMKVNCLIQAQLGCI--PIQDFALTQDTSKIFRNGSRITRWLSDFVAVQEKFAVLLNS 913
Query: 1304 MHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFP 1363
+ L + LW + L + G+++ +++ + L+ ++ P
Sbjct: 914 LILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIEETDARELELILNRHP 973
Query: 1364 V--SRLHQDLQRFPRIQVKLRLQRR--DIDGENSLTLNIR 1399
+++ + + P+ ++++ R D E +T+ +R
Sbjct: 974 PFGTQIKETVMCLPKYELEVEQIARYSDTTAEVLVTVILR 1013
Score = 483 (175.1 bits), Expect = 9.5e-42, P = 9.5e-42
Identities = 160/573 (27%), Positives = 271/573 (47%)
Query: 1 VESTQRMI--RIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEP 57
VE+ + +I R V +SAT+PN ++A++L + D +RP+ L + +G
Sbjct: 444 VENPRNIIPMRFVAVSATIPNAEDIAEWLSDGERSAICLKMDEKHRPVKLRKVVLGFPCS 503
Query: 58 NFAARNELLSEICYK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFN 115
N + + YK VV + +VF +RK + A LV A+ +E
Sbjct: 504 NNQTEFKFDLTLNYKIASVVQTYSDQKPTLVFCATRKGVQQAASILVKDAKFIMTVE--- 560
Query: 116 NDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCT 175
+L + S+ +DL+ + G+A HHAGM SDR + E F+ G L VL T
Sbjct: 561 --QKQRLHKCAYSIRDSKLRDLL-IHGVAY--HHAGMELSDRKVVEGAFTVGDLPVLFTT 615
Query: 176 ATLAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIIIT 231
+TLA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+T
Sbjct: 616 STLAMGVNLPAHLVVIKSTMHY---AGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMT 672
Query: 232 SHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKL 291
Y+++L +ES L ++LNAE+ L T+T+V A W+ T L IR
Sbjct: 673 RLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALK 732
Query: 292 NPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHF 351
NP YG + + K + L L +++ DE NF TE GR+ + +
Sbjct: 733 NPSHYGFA--SGLNKDGIESKLQELCLKNLNDLSSLDLIKMDEDI-NFKPTEAGRLMAWY 789
Query: 352 YIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK- 410
Y+ + +V+ + + + S+++ M++ EF ++ +R E+ L TL + + ++
Sbjct: 790 YVTFETVKKFCTISGKETL-SDLVTMIASCKEFLDVQLRINEKKTLNTLNKDPNRITIRF 848
Query: 411 ---GGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCE 467
G + K++ LIQ + I F+L D + I + +RI R L + +
Sbjct: 849 PMEGKIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRITRWLSDFVAVQEKFA 908
Query: 468 MSLFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGA 525
+ L L K ++W + H +Q +K + + + G +++E + +++
Sbjct: 909 VLLNSLILAKCFRCKLWENSLHVSKQLEK-IGITLSNAMVNAGLTSFKKIEETDARELEL 967
Query: 526 LI-RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
++ R+ P G +K+ + P +L V I R
Sbjct: 968 ILNRHPPFGTQIKETVMCLPKYELE--VEQIAR 998
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 868 (310.6 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 240/772 (31%), Positives = 380/772 (49%)
Query: 672 VTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNT 731
VT + F +FN IQ++ F L +TD N ++ APTGSGKT+ ELA+ L
Sbjct: 266 VTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLME 325
Query: 732 Q----SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADII 786
S++K+VY+AP+KA+ +R +DWK + +G E+TGD DL + A II
Sbjct: 326 VPLPWSNIKIVYMAPIKALCSQRFDDWKKKF-GPIGLNCKELTGDTVMDDLFEIQHAHII 384
Query: 787 ISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYI---SSQT 842
++TPEKWD ++R W + V V L ++DE+H++ E RGP LEV+VSRM+ + S
Sbjct: 385 MTTPEKWDSMTRKWRDNSLVHLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQILSPAV 444
Query: 843 ERA-----VRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVR--PVPLEVHIQGYPGKF 895
E +RF+ +S + NA D+A+WL GE K R PV L + G+P
Sbjct: 445 ENTNSIIPMRFVAVSATIPNAEDIAEWLSDGERSAVCLKMDERHRPVKLRKVVLGFPSSD 504
Query: 896 YCPRMN---SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
++N + I T+S KP L+F ++R+ + A L++ A T Q
Sbjct: 505 NQTEFKFDLTLNYKIASIIQTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQ--- 561
Query: 953 MPEEDLQMVLSQVTDQNLR-QTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
++ LQ + D LR L G+ HHAG+ DR +VE F I VL TSTL
Sbjct: 562 --KQRLQKCAYSIKDSKLRVDILIHGVAYHHAGMELSDRKVVEGAFTVGDIPVLFTTSTL 619
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
A GVNLPAHLV+IK T +Y G + ++ TDILQM+GRAGRPQ+D AVI+
Sbjct: 620 AMGVNLPAHLVVIKSTMHYAGGM--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLST 677
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
K Y + L +ESSL L +H NAEIV TI + A+ ++ T L+ R NP++
Sbjct: 678 KEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITNVNIALEWIRSTLLYIRALKNPSH 737
Query: 1132 YGLED-TEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED-TVEPTMLGTIASQYYLSYVTV 1189
YG +G+ S L L DL +KM ED +PT G + + YY+++ TV
Sbjct: 738 YGFASGLNKDGIESKLQELCLKNLNDLSSLNLIKMDEDINFKPTEAGRLMAWYYITFETV 797
Query: 1190 SMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRL 1244
F + G +T L + +++ E+ ++ +R NE L++ +RF ++ R+
Sbjct: 798 KKFCTMSGKET-LSDLVTMIASCKEFLDVQLRINEKKALNTLNKDPNRTTIRFPMEG-RI 855
Query: 1245 DDPHVKANLLFQAHFSRLDLPISDYVT--DLKSVLDQSIRIIQAMIDICANSGWLSSSIT 1302
+K N L QA + P+ D+ D + RI + + D A + +
Sbjct: 856 KTREMKVNCLIQAQLGCI--PVQDFALTQDTAKIFRNGSRITRWLSDFVATQEKFAVLLN 913
Query: 1303 CMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNF 1362
+ L + LW + L + G+++ +++ + L+ ++
Sbjct: 914 SLILAKCFRCKLWENSPHVSKQLEKIGITLSNAMVNAGLTSFKKIEETDARELELILNRH 973
Query: 1363 PV--SRLHQDLQRFPRIQVKLRLQRR--DIDGENSLTLNIRMDKMNSWKNTS 1410
P +++ + + P+ ++++ R D E +T+ +R + K T+
Sbjct: 974 PPFGTQIKETVMYLPKYELEVEQITRYSDTMAEILVTVILRNFEQLQTKRTA 1025
Score = 507 (183.5 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 162/574 (28%), Positives = 271/574 (47%)
Query: 1 VESTQRMI--RIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEP 57
VE+T +I R V +SAT+PN ++A++L + D +RP+ L + +G
Sbjct: 444 VENTNSIIPMRFVAVSATIPNAEDIAEWLSDGERSAVCLKMDERHRPVKLRKVVLGFPSS 503
Query: 58 NFAARNELLSEICYK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFN 115
+ + + YK ++ + +VF +RK + A LV A+ +E
Sbjct: 504 DNQTEFKFDLTLNYKIASIIQTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVE--- 560
Query: 116 NDTHPQLSLIKKDVMKSRNKDL-IELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVC 174
Q ++K ++ L +++ V HHAGM SDR + E F+ G + VL
Sbjct: 561 -----QKQRLQKCAYSIKDSKLRVDILIHGVAYHHAGMELSDRKVVEGAFTVGDIPVLFT 615
Query: 175 TATLAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIII 230
T+TLA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+
Sbjct: 616 TSTLAMGVNLPAHLVVIKSTMHY---AGGMFEEYSETDILQMIGRAGRPQFDTTATAVIM 672
Query: 231 TSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMK 290
T Y+++L IES L ++LNAE+ L T+TNV A W+ T L IR
Sbjct: 673 TRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITNVNIALEWIRSTLLYIRAL 732
Query: 291 LNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASH 350
NP YG + + K + L L +++ DE NF TE GR+ +
Sbjct: 733 KNPSHYGFA--SGLNKDGIESKLQELCLKNLNDLSSLNLIKMDEDI-NFKPTEAGRLMAW 789
Query: 351 FYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQ----TLCP 406
+YI + +V+ + M + S+++ M++ EF ++ +R E+ L TL + T
Sbjct: 790 YYITFETVKKFCTMSGKETL-SDLVTMIASCKEFLDVQLRINEKKALNTLNKDPNRTTIR 848
Query: 407 VEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWC 466
++G + K++ LIQ + + F+L D A I + +RI R L + +
Sbjct: 849 FPMEGRIKTREMKVNCLIQAQLGCIPVQDFALTQDTAKIFRNGSRITRWLSDFVATQEKF 908
Query: 467 EMSLFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIG 524
+ L L K ++W + H +Q +K + + + G +++E + +++
Sbjct: 909 AVLLNSLILAKCFRCKLWENSPHVSKQLEK-IGITLSNAMVNAGLTSFKKIEETDARELE 967
Query: 525 ALI-RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
++ R+ P G +K+ + Y P +L V ITR
Sbjct: 968 LILNRHPPFGTQIKETVMYLPKYELE--VEQITR 999
Score = 39 (18.8 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 1342 STVQQLL-DIPKENLQTVIGNFPVSRLHQDLQRFPRIQVK 1380
ST+ L D+ N + + PV RL + + P + +K
Sbjct: 1173 STISSYLSDLRNRNAVSSLP--PVKRLKMQMNKSPSVDLK 1210
>UNIPROTKB|F1SU44 [details] [associations]
symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
Length = 1027
Score = 825 (295.5 bits), Expect = 3.1e-81, P = 3.1e-81
Identities = 174/394 (44%), Positives = 250/394 (63%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E TQ +R++GLSATLPNY +VA FLRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 639 IEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAI 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 699 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 757
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+++ + + +N +L +L +HHAGM R DR L E LF++ ++VLV TATLAW
Sbjct: 758 STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW 817
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSGEGIIITSHDKLA 237
GVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D GEGI+ITSH +L
Sbjct: 818 GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ 877
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
YYL LL QLPIESQ ++ L D LNAE+ LG V N K L + + +G
Sbjct: 878 YYLSLLNQQLPIESQMVAKLPDMLNAEIVLGNVQNAKRGLGSGSVVILCVVLWATS-TWG 936
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSG-NFYCTELGRIASHFYIQYS 356
+ S L R + + L+ + + + + TELGRIASH+YI
Sbjct: 937 ---PPTLGLTSPILMCRCFLDLSITCLNCLLLGTVEIYHAISVHVTELGRIASHYYITND 993
Query: 357 SVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVR 390
+V+TYN++L+ +++ E+ + S SSEF+NI VR
Sbjct: 994 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVR 1027
Score = 824 (295.1 bits), Expect = 4.0e-81, P = 4.0e-81
Identities = 227/597 (38%), Positives = 323/597 (54%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ +S +LL ++ LP A +E F N IQ++++ TD N+L
Sbjct: 446 HVPALKPKPFSSEEQLLPVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALETDENLL 500
Query: 709 LGAPTGSGKTISAELAML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDRL 758
L APTG+GKT A + ML H+ N D K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVD-DFKIIYIAPMRSLVQEMVGSFGKRL 559
Query: 759 VSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIH 818
+ G + E+TGD+ + + II+ TPEKWD I+R R Y + V L+ILDEIH
Sbjct: 560 ATY-GITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIH 618
Query: 819 LLGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFK 876
LL +RGP+LE +V+R +R I T+ VR IGLS L N D+A +L V GLF F
Sbjct: 619 LLHDDRGPVLEALVARAIRNIE-MTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFD 677
Query: 877 PSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALD 936
S RPVPLE G K R MN+ Y I H+ VL+FV SR++T TA
Sbjct: 678 NSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARA 737
Query: 937 LIQFAASDETPRQFL--GMPE-EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLV 993
+ +T FL G E L+ Q + L+ L +G +HHAG+ DR+LV
Sbjct: 738 IRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLV 797
Query: 994 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAG 1053
E+LFA+ IQVLV T+TLAWGVNLPAH VIIKGT+ Y + R+ + DILQM+GRAG
Sbjct: 798 EDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAG 857
Query: 1054 RPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAV 1113
RPQYD G+ +++ + +Y L + P+ES + +L D NAEIV G + + + +
Sbjct: 858 RPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVAKLPDMLNAEIVLGNVQNAKRGL 917
Query: 1114 HYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDS--GCVKM-TED-- 1168
S L L + G GL+S + L+ F DL + C+ + T +
Sbjct: 918 GSGSVVILCVVLWATSTW-G---PPTLGLTSPI--LMCRCFLDLSITCLNCLLLGTVEIY 971
Query: 1169 ---TVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTS-LEVFLHILSGASEYDELPVR 1221
+V T LG IAS YY++ TV + + P S +E+F + S +SE+ + VR
Sbjct: 972 HAISVHVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELF-RVFSLSSEFKNITVR 1027
>UNIPROTKB|G4N3Z7 [details] [associations]
symbol:MGG_05900 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
Length = 1508
Score = 838 (300.0 bits), Expect = 4.6e-80, P = 4.6e-80
Identities = 226/736 (30%), Positives = 372/736 (50%)
Query: 683 LYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLF--NTQSDMKVVYI 740
++ F FN +Q++ F +Y T++NV++ APTGSGKT ELA+ L NT + KV+Y+
Sbjct: 248 VFPFELFNAVQSKSFASVYKTNDNVVVSAPTGSGKTAIFELAICKLLSQNTDQNFKVIYV 307
Query: 741 APLKAIVRERMNDWKDRLVSQLGKEMVEMTGD-YTPDLMALLSADIIISTPEKWDGISRN 799
AP KA+ ER DW+ + L E+TGD ++ D+ + +A II++TPEK D I+R
Sbjct: 308 APTKALCSERARDWESKF-RHLNLTSAELTGDTFSTDMSRVRAAQIIVTTPEKLDSITRR 366
Query: 800 WHS-RNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANA 858
W R + V L+++DE+H L RG LEV++ RM+ +Q +R + LS + N+
Sbjct: 367 WEDYRKLLDLVQLVLIDEVHFLKDTRGATLEVLICRMK---TQVSN-IRVVALSATVPNS 422
Query: 859 GDLADWLGVGEIG------LFNFKPSVRPVPLEVHIQGYPGKFYCPRMN-SMNKPAYAAI 911
D+A WLG G L F RPV L+ H+ G + ++ I
Sbjct: 423 EDVAKWLGRGNTDNHQPARLETFGEEFRPVRLQKHVYGLHCSGNAFQFEPQLDTKLCEVI 482
Query: 912 CTHSPTKPVLIFVSSRRQTRLTALDLIQF---AASDETPRQFLGMPEEDLQMVLSQVTDQ 968
THS KP+++F +R+ LTA L Q A D+ P + G P ++++ VT+
Sbjct: 483 TTHSQKKPIIVFCFTRKSCELTAKKLSQLWISMADDKKP--WPG-PGQNMK-----VTND 534
Query: 969 NLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE 1028
L+Q +Q G+ HHAGL +DR VE+ + K+ V+ CTSTL+ GVNLP H VI+KGT
Sbjct: 535 GLQQVMQQGVAFHHAGLEQQDRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILKGTM 594
Query: 1029 -YYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVES 1087
+ DGK Y D +++QM+GRAGRPQ+D A+IL K+ Y+ +ES
Sbjct: 595 GFQDGKLLEYSDL---EVVQMLGRAGRPQFDNSAVAIILTRSETKARYEAMASGTQVLES 651
Query: 1088 SLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLS 1147
+L L H N+EI GTI + A +L T+L RL NP++Y ++ G ++
Sbjct: 652 TLHHNLIHHLNSEICLGTIRSLDSAKEWLKSTFLGVRLHANPSHYKIDSQSPNGEKLHVG 711
Query: 1148 RLVQNTFED----LEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLE 1203
R + + E L+++ ++ + +E T G S+Y + + T+ M ++ T +
Sbjct: 712 RSIDDMCEREINLLQEAKLIRFDNNVLECTTAGRSMSEYMIRFETMKMI-LDMPTGTKIH 770
Query: 1204 VFLHILSGASEYDELPVRHNEDNHNEALSQR--VRFAVDNNRLDDPHVKANLLFQAHFSR 1261
L L+ A E+ +L ++ NE L++ +R+ V + + K ++ Q
Sbjct: 771 DILMTLAKAEEFKDLRIKSNERALYRTLNESPFIRYQVRAKDITEAWHKVFIIVQLDLGG 830
Query: 1262 LDLPI--SDYVTDL---------KSVLDQSIRIIQAMIDICANSGWLSSSIT-CMHLLQM 1309
D P SD + + + V D+ +++ +ID C + S ++ + LL+
Sbjct: 831 GDFPSPKSDTSSSVSKNHFNITKRQVSDRMKWLLRCVID-CKGAERDSETVNNALELLRS 889
Query: 1310 VMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRL 1367
+ G W S L P + + L GI+ + L + ++ ++ P L
Sbjct: 890 INAGGWEGLPSQLLQVPGIGPVSMRKLTTHGITNMASLREADYMAIENILTRKPPFGKNL 949
Query: 1368 HQDLQRFPRIQVKLRL 1383
++ FP++ ++L L
Sbjct: 950 MDTMKTFPKLGLELSL 965
Score = 448 (162.8 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 163/574 (28%), Positives = 271/574 (47%)
Query: 8 IRIVGLSATLPNYLEVAQFL-RVNPE----MGLFFFDSSYRPIPLAQQYIGI--SEPNFA 60
IR+V LSAT+PN +VA++L R N + L F +RP+ L + G+ S F
Sbjct: 410 IRVVALSATVPNSEDVAKWLGRGNTDNHQPARLETFGEEFRPVRLQKHVYGLHCSGNAFQ 469
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
+L +++C +V+ + Q +VF +RK TA+KL L D D P
Sbjct: 470 FEPQLDTKLC--EVITTHSQKKPIIVFCFTRKSCELTAKKLSQLWISMAD------DKKP 521
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
+ MK N L ++ V HHAG+ + DR E+ + EG L V+ CT+TL+
Sbjct: 522 WPGPGQN--MKVTNDGLQQVMQQGVAFHHAGLEQQDRLAVEKAYLEGKLHVICCTSTLSV 579
Query: 181 GVNLPAHTVVIKGTQLY-DPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYY 239
GVNLP HTV++KGT + D K + DL ++ + GRAGRPQFD S II+T + A Y
Sbjct: 580 GVNLPCHTVILKGTMGFQDGKLLEYSDLEVVQMLGRAGRPQFDNSAVAIILTRSETKARY 639
Query: 240 LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIG 299
+ + +ES +L +LN+E+ LGT+ ++ A WL T+L +R+ NP Y I
Sbjct: 640 EAMASGTQVLESTLHHNLIHHLNSEICLGTIRSLDSAKEWLKSTFLGVRLHANPSHYKID 699
Query: 300 WDEVIADP-SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV 358
+ + + L +AK++RFD CT GR S + I++ ++
Sbjct: 700 SQSPNGEKLHVGRSIDDMCEREINLLQEAKLIRFDNNV--LECTTAGRSMSEYMIRFETM 757
Query: 359 ETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQT-LCPVEVKGGPSNK- 416
+ +M +++ ++ + EF+++ ++ E+ TL ++ +V+ +
Sbjct: 758 KMILDM-PTGTKIHDILMTLAKAEEFKDLRIKSNERALYRTLNESPFIRYQVRAKDITEA 816
Query: 417 -HGKISILIQLYISRGWI-----DTFSLVSDAAY------ISASLARIMRALFETCLRRG 464
H K+ I++QL + G DT S VS + +S + ++R + +
Sbjct: 817 WH-KVFIIVQLDLGGGDFPSPKSDTSSSVSKNHFNITKRQVSDRMKWLLRCVIDCKGAER 875
Query: 465 WCEMSLFMLEYCKAVDRQIW---PHQHPLRQFDKELPAEILRKLEERG-ADLDRLQEMEE 520
E LE ++++ W P Q L Q P +RKL G ++ L+E +
Sbjct: 876 DSETVNNALELLRSINAGGWEGLPSQ--LLQVPGIGPVS-MRKLTTHGITNMASLREADY 932
Query: 521 KDI-GALIRYTPGGRLVKQYLGYFPSIQLSATVS 553
I L R P G+ + + FP + L ++S
Sbjct: 933 MAIENILTRKPPFGKNLMDTMKTFPKLGLELSLS 966
Score = 47 (21.6 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 868 GEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLI 922
G +GL K + R VP + K RM+S+ KP + PT P+ I
Sbjct: 1057 GLVGLGVSKTAHRTVPKPASAKRASQKSL-QRMSSVTKPVKNKNSGNDPTSPIEI 1110
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 810 (290.2 bits), Expect = 1.3e-79, P = 1.3e-79
Identities = 239/835 (28%), Positives = 411/835 (49%)
Query: 685 NFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSD----MKVVYI 740
+F +FN +Q+Q + +++ N + APTGSGKT+ ELA++ L S+ ++ VY+
Sbjct: 8 DFPYFNYVQSQALDDVLYSNKNFVACAPTGSGKTVLFELAIVRLLIEASEPWHNVRAVYM 67
Query: 741 APLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRN 799
AP+KA+ ++ ++WK + LG + E+TGD D + A +I +T EKWD ++R
Sbjct: 68 APIKALCSQQYDNWKQKF-GPLGLKCKELTGDTEIDDFFEIQDAHLIFTTAEKWDSMTRR 126
Query: 800 WHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMR----Y---ISSQTERAVRFIGL 851
W + + L ++DE+H++ + RG LEV+VSRM+ Y I+ +++ +VRF+ +
Sbjct: 127 WKDNCLLTSIRLFLVDEVHVVKDKTRGATLEVVVSRMKTMHFYRQAINPESKASVRFVAV 186
Query: 852 STALANAGDLADWLG--VGEIGLFNFKPSVRPVPLEVHIQGYP-GKFYCP-RMN-SMNKP 906
S + N D+++WL G S RPV L + G+P G + + S+N
Sbjct: 187 SATIPNIQDVSEWLSDESGPATCLEMDESHRPVKLRKVVLGFPCGSNQNEFKFDLSLNYK 246
Query: 907 AYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEED-LQMVLSQV 965
I T+S KP L+F S+R+ + +A L A D R + + + L + +
Sbjct: 247 LANIIQTYSDQKPTLVFCSTRKGVQQSASVL----AKDA--RFIMSIDHKQRLVKYANSL 300
Query: 966 TDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIK 1025
D LR +GIG HHAG++ DR + E F + VL TSTLA GVN+PAHLV+IK
Sbjct: 301 LDAKLRDLFVYGIGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIK 360
Query: 1026 GTEYY-DGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP 1084
T +Y G + Y + D+LQM+GRAGRPQ+D AVI+ K Y FL
Sbjct: 361 STMHYVGGACEEYSE---ADLLQMIGRAGRPQFDTTATAVIMTRPQTKDKYMHFLSGLDC 417
Query: 1085 VESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE-DTEAEGLS 1143
+ESSL L +H NAEIV TI A+ ++ T+L+ R NP +YG + + G+
Sbjct: 418 IESSLHTNLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHYGFPPEVDKCGIE 477
Query: 1144 SYLSRLVQNTFEDLEDSGCVKMTED-TVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSL 1202
+ L L L + M ED ++PT G + ++Y +++ TV F G +T
Sbjct: 478 TKLQELCLKNLNSLASFNLITMDEDINIKPTETGKLMARYCVAFDTVKQFSMVTGTETLP 537
Query: 1203 EVFLHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKANLLFQA 1257
E+ + ++S A E+ ++ +R NE L++ +RF ++ ++ +K N L QA
Sbjct: 538 EL-IEMISKAKEFSDMQLRVNERKTLNTLNKDKNRTTIRFPIEG-KIKSNDMKVNCLIQA 595
Query: 1258 HFSRLDLPISDY--VTDLKSVLDQSIRIIQAMID-ICANS-GWLSSSITCMHLLQMVMQG 1313
+ PI ++ + D + ++R+ + + + +C +S ++ + + L +
Sbjct: 596 QLGCI--PIQEFGLIQDTGKIFRNAVRVSRYLTEFLCHHSKSNFAAQLNALILAKCFRAK 653
Query: 1314 LWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDL 1371
LW + L L G++T ++ L+ ++ P +++ + +
Sbjct: 654 LWENSPYISKQLERIGLSLATALVNAGLTTFSKIEQTSPRELELIVNRHPPFGNQIKEAI 713
Query: 1372 QRFPRIQVKL-RLQRRDID-GENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVL 1429
+ PR +V L ++ R E T+N+ K + K T+ I + V+
Sbjct: 714 SKLPRCEVSLEQIPRYSPSTAEIVFTVNMNNFKELALKRTAPDHHY-VTLIVGDCDNKVV 772
Query: 1430 GNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFE--QEHS 1482
S+ LK S+S R+ P G + + + ++S Y+G + Q++S
Sbjct: 773 FQQKISDTLLLKSGSWSKRIEVTRS-PKG----EELSIHLISSEYVGLDIQQDYS 822
Score = 497 (180.0 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 156/565 (27%), Positives = 272/565 (48%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMG---LFFFDSSYRPIPLAQQYIGISEPNFAARNE 64
+R V +SAT+PN +V+++L + E G D S+RP+ L + +G P + +NE
Sbjct: 181 VRFVAVSATIPNIQDVSEWL--SDESGPATCLEMDESHRPVKLRKVVLGF--PCGSNQNE 236
Query: 65 LLSEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
++ YK ++ + +VF +RK ++A L AR ++ H
Sbjct: 237 FKFDLSLNYKLANIIQTYSDQKPTLVFCSTRKGVQQSASVLAKDARFIMSID------HK 290
Query: 121 QLSLIK--KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
Q L+K ++ ++ +DL ++G +G HHAGM SDR +TE F+ G L VL T+TL
Sbjct: 291 Q-RLVKYANSLLDAKLRDLF-VYG--IGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTL 346
Query: 179 AWGVNLPAHTVVIKGTQLYDPKA-GGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLA 237
A GVN+PAH VVIK T Y A + + +L + GRAGRPQFD + +I+T
Sbjct: 347 AMGVNMPAHLVVIKSTMHYVGGACEEYSEADLLQMIGRAGRPQFDTTATAVIMTRPQTKD 406
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYG 297
Y+ L+ IES ++L ++LNAE+ L T+++V A W+ T+L IR NP YG
Sbjct: 407 KYMHFLSGLDCIESSLHTNLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHYG 466
Query: 298 IGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS 357
+ + + K + L +L ++ DE N TE G++ + + + + +
Sbjct: 467 --FPPEVDKCGIETKLQELCLKNLNSLASFNLITMDEDI-NIKPTETGKLMARYCVAFDT 523
Query: 358 VETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQ----TLCPVEVKGGP 413
V+ ++ M+ E+IEM+S + EF ++ +R E+ L TL + T ++G
Sbjct: 524 VKQFS-MVTGTETLPELIEMISKAKEFSDMQLRVNERKTLNTLNKDKNRTTIRFPIEGKI 582
Query: 414 SNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMS--LF 471
+ K++ LIQ + I F L+ D I + R+ R L E + L
Sbjct: 583 KSNDMKVNCLIQAQLGCIPIQEFGLIQDTGKIFRNAVRVSRYLTEFLCHHSKSNFAAQLN 642
Query: 472 MLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGALI-RY 529
L K ++W + + + + + + L G ++++ +++ ++ R+
Sbjct: 643 ALILAKCFRAKLWENSPYISKQLERIGLSLATALVNAGLTTFSKIEQTSPRELELIVNRH 702
Query: 530 TPGGRLVKQYLGYFPSIQLSATVSP 554
P G +K+ + P ++S P
Sbjct: 703 PPFGNQIKEAISKLPRCEVSLEQIP 727
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 785 (281.4 bits), Expect = 3.0e-75, P = 3.0e-75
Identities = 218/706 (30%), Positives = 350/706 (49%)
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEK 792
++K+VY+AP+KA+ +R +DWK++ +G E+TGD DL + A II++TPEK
Sbjct: 9 NIKIVYMAPIKALCSQRFDDWKEKF-GPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEK 67
Query: 793 WDGISRNWHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISS------QTERA 845
WD ++R W + V+ V L ++DE+H++ E RGP LEV+VSRM+ + S T A
Sbjct: 68 WDSMTRKWRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTA 127
Query: 846 V--RFIGLSTALANAGDLADWLGVGEIGLFNFK--PSVRPVPLEVHIQGYPGKFYCPRMN 901
+ RF+ +S + NA D+A+WL GE K S RPV L+ + G+P
Sbjct: 128 IPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPCSSNQTEFK 187
Query: 902 ---SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDL 958
++N + I +S KP L+F ++R+ + A L++ A T Q ++ L
Sbjct: 188 FDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQ-----KQRL 242
Query: 959 QMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP 1018
Q V D LR L+ G HHAG+ DR +VE F + VL TSTLA GVNLP
Sbjct: 243 QKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLP 302
Query: 1019 AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF 1078
AHLV+IK T +Y G + ++ TDILQM+GRAGRPQ+D AVI+ + Y +
Sbjct: 303 AHLVVIKSTMHYAGGL--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQM 360
Query: 1079 LYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLED-T 1137
L VESSL L +H NAEIV TI AV ++ T L+ R NP++YG
Sbjct: 361 LACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGL 420
Query: 1138 EAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDT-VEPTMLGTIASQYYLSYVTVSMFGSNI 1196
+G+ + L L DL +KM E +PT G + + YY+++ TV F +
Sbjct: 421 NKDGIEAKLQELCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITFETVKKFYTIS 480
Query: 1197 GPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQ-----RVRFAVDNNRLDDPHVKA 1251
G +T L + +++G E+ ++ +R NE L++ +RF ++ R+ +K
Sbjct: 481 GKET-LSDLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPMEG-RIKTREMKV 538
Query: 1252 NLLFQAHFSRLDLPISDYVT--DLKSVLDQSIRIIQAMID-ICANSGWLSSSITCMHLLQ 1308
N L QA + PI D+ D + RI + + D + A + + + L +
Sbjct: 539 NCLIQAQLGCI--PIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLLNSLILAK 596
Query: 1309 MVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SR 1366
LW + L + G+++ +++ + L+ ++ P ++
Sbjct: 597 CFRCKLWENSLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDARELELILNRHPPFGTQ 656
Query: 1367 LHQDLQRFPRIQVKLRLQRR--DIDGENSLTLNIRMDKMNSWKNTS 1410
+ + + P+ ++K+ R D E +T+ +R + K T+
Sbjct: 657 IKETVMYLPKYELKVEQITRYSDTTAEILVTVILRNFEQLQTKRTA 702
Score = 490 (177.5 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 163/573 (28%), Positives = 270/573 (47%)
Query: 3 STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFF-FDSSYRPIPLAQQYIGISEPNFAA 61
ST +R V +SAT+PN ++A++L + D S+RP+ L + +G P +
Sbjct: 125 STAIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGF--PCSSN 182
Query: 62 RNELLSEIC--YK--KVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNND 117
+ E ++ YK V+ +VF +RK + A LV A+ +E
Sbjct: 183 QTEFKFDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVE----- 237
Query: 118 THPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTAT 177
Q ++K R+ L ++ HHAGM SDR + E F+ G L VL T+T
Sbjct: 238 ---QKQRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTST 294
Query: 178 LAWGVNLPAHTVVIKGTQLYDPKAGG----WRDLGMLDIFGRAGRPQFDRSGEGIIITSH 233
LA GVNLPAH VVIK T Y AGG + + +L + GRAGRPQFD + +I+T
Sbjct: 295 LAMGVNLPAHLVVIKSTMHY---AGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRL 351
Query: 234 DKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNP 293
Y+++L + +ES L ++LNAE+ L T+T+V A W+ T L IR NP
Sbjct: 352 STRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNP 411
Query: 294 LAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI 353
YG + + K + L L +++ DE NF TE GR+ + +YI
Sbjct: 412 SHYGFA--SGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDE-GVNFKPTEAGRLMAWYYI 468
Query: 354 QYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK--- 410
+ +V+ + + + S+++ +++ EF +I +R E+ L TL + + ++
Sbjct: 469 TFETVKKFYTISGKETL-SDLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPM 527
Query: 411 -GGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRAL--FETCLRRGWCE 467
G + K++ LIQ + I F+L D A I +RI R L F + +
Sbjct: 528 EGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAV 587
Query: 468 MSLFMLEYCKAVDRQIWPHQ-HPLRQFDKELPAEILRKLEERG-ADLDRLQEMEEKDIGA 525
+ L L K ++W + H +Q +K + + + G +++E + +++
Sbjct: 588 L-LNSLILAKCFRCKLWENSLHVSKQLEK-IGITLSNAIVNAGLTSFKKIEETDARELEL 645
Query: 526 LI-RYTPGGRLVKQYLGYFPSIQLSATVSPITR 557
++ R+ P G +K+ + Y P +L V ITR
Sbjct: 646 ILNRHPPFGTQIKETVMYLPKYELK--VEQITR 676
Score = 39 (18.8 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 632 RAVSDSWLHAEAFYCISFHNLALPQ-ARTSHTEL 664
R +S+S++ + IS N A+P+ + +S T+L
Sbjct: 999 REMSNSFVSSHEMSDISLSNSAMPKFSASSMTKL 1032
>ASPGD|ASPL0000030426 [details] [associations]
symbol:AN5514 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 EMBL:BN001305 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 eggNOG:COG1204 EMBL:AACD01000094 GO:GO:0008026
KO:K15271 OrthoDB:EOG4WWVSR RefSeq:XP_663118.1
ProteinModelPortal:Q5B1R6 EnsemblFungi:CADANIAT00003572
GeneID:2871792 KEGG:ani:AN5514.2 HOGENOM:HOG000216651
Uniprot:Q5B1R6
Length = 1385
Score = 526 (190.2 bits), Expect = 8.0e-70, Sum P(2) = 8.0e-70
Identities = 138/373 (36%), Positives = 199/373 (53%)
Query: 650 HNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLL 709
H+LA P + T + L V L +N Y L+NF FN +Q++ FH +Y +D+NV++
Sbjct: 213 HDLAEP-FKDVPTSDRGIALLSVRELPDN-YRPLFNFPVFNAVQSKCFHAIYKSDDNVVI 270
Query: 710 GAPTGSGKTISAELAMLHLFNTQSD--MKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMV 767
APTGSGKT+ ELA+ L N + D KVVY AP K++ ER DW + + LG +
Sbjct: 271 AAPTGSGKTVVMELAICRLLNIRKDKKFKVVYQAPTKSLCSERFRDWNQKFHA-LGLQCA 329
Query: 768 EMTGDYTPDLMA-LLSADIIISTPEKWDGISRNW--HSRNYVKKVGLMILDEIHLLGAER 824
E+TGD + + + II++TPEKWD ++R W H R ++ V L ++DE+H L R
Sbjct: 330 ELTGDTDHSQLGNVQNRQIIVTTPEKWDSMTRKWKDHIR-LMQPVKLFLIDEVHTLKEAR 388
Query: 825 GPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLF------NFKPS 878
G LE +VSRM+ I S VRF+ LS + N+ D+A WLG +F
Sbjct: 389 GATLEAVVSRMKSIGSN----VRFVALSATIPNSEDIATWLGRNATSQHVPAHREHFGEE 444
Query: 879 VRPVPLEVHIQGYP---GKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTAL 935
RPV L+ + GY F ++ + N I THS KP++IF S+R T TA
Sbjct: 445 FRPVKLQKFVYGYHFSGNNFAFDKLLNSN-----IIGTHSAKKPIMIFCSTRNSTVSTAK 499
Query: 936 DLIQ-FAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVE 994
+L + ++ S R + G P + L V +L+ T G+ HHAGL +DR LVE
Sbjct: 500 ELARLWSMSSRLVRMWKG-PNKPLP-----VKHADLKVTTAAGVAFHHAGLETEDRHLVE 553
Query: 995 ELFANNKIQVLVC 1007
+ KI V +C
Sbjct: 554 NGYLQGKISV-IC 565
Score = 279 (103.3 bits), Expect = 8.0e-70, Sum P(2) = 8.0e-70
Identities = 94/374 (25%), Positives = 174/374 (46%)
Query: 1044 DILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVS 1103
+++QM+GRAGRPQ+D AVIL + + S Y++ + VESSL L +H NAEI
Sbjct: 576 EVMQMLGRAGRPQFDDSATAVILTRKERVSHYERLVSGSESVESSLHLNLIEHLNAEIGL 635
Query: 1104 GTIFHKEDAVHYLSWTYLFRRLAINPAYYGL-EDTEAEGLSSYLSRLVQNTFEDLEDSGC 1162
G I E A +L+ T+L RL NP +Y L E + L + + + L++
Sbjct: 636 GNIKSTESAASWLAGTFLSVRLRRNPTHYRLKEGANRNDTNEMLRHICEKDIKLLQEYAL 695
Query: 1163 VKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRH 1222
V TE +++ T G S+Y + Y T+ + P + + L I+ A E+ ++ +
Sbjct: 696 VD-TE-SLKSTPFGYAMSRYSIRYETMKTL-IKMKPKSDIAQILAIICQAEEFRDIRFKA 752
Query: 1223 NEDNHNEAL--SQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISD--------YVTD 1272
E + + S+ +RF ++ + + H K +LL Q+ ++ P + + +
Sbjct: 753 GEKLLYKEINRSKDIRFPIEVDIVLPAH-KISLLIQSELGAVEFPSGEQFQKHRFTFQQE 811
Query: 1273 LKSVLDQSIRIIQAMIDICANSGWLSSSIT-C--MHLLQMVMQGLWFEQDSALWMFPCMN 1329
+V R+I+ +ID A+ L S+T C + L + + +W + +N
Sbjct: 812 KSTVFAHVNRVIRCIIDCQAH---LKDSVTLCNALGLARSLAARVWDHSPFQMKQIEKLN 868
Query: 1330 NDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPV--SRLHQDLQRFPRIQVKLRLQRRD 1387
+ L A GI ++ L + + +RL + L FP+++V +++ +D
Sbjct: 869 ATAVRKLVAHGIDSIVALEKSKPHLIDIALSKNQAFGTRLQKHLANFPKLRVSVKMTGKD 928
Query: 1388 IDGENSLTLNIRMD 1401
I + +N + +
Sbjct: 929 IHPGPFVRVNFKAE 942
Score = 269 (99.8 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 91/366 (24%), Positives = 184/366 (50%)
Query: 204 WRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNA 263
+ DL ++ + GRAGRPQFD S +I+T +++++Y RL++ +ES +L ++LNA
Sbjct: 572 YSDLEVMQMLGRAGRPQFDDSATAVILTRKERVSHYERLVSGSESVESSLHLNLIEHLNA 631
Query: 264 EVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARA 323
E+ LG + + + A +WL T+LS+R++ NP Y + D + L R + +
Sbjct: 632 EIGLGNIKSTESAASWLAGTFLSVRLRRNPTHYRLKEGANRNDTNEML--RHICEKDIKL 689
Query: 324 LDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSE 383
L + ++ D +S T G S + I+Y +++T +M + + ++++ ++ + E
Sbjct: 690 LQEYALV--DTES--LKSTPFGYAMSRYSIRYETMKTLIKM-KPKSDIAQILAIICQAEE 744
Query: 384 FENIVVRDEEQ---NELETLVQTLCPVEVKGG-PSNKHGKISILIQLYISRGWIDT---- 435
F +I + E+ E+ P+EV P++K IS+LIQ + +
Sbjct: 745 FRDIRFKAGEKLLYKEINRSKDIRFPIEVDIVLPAHK---ISLLIQSELGAVEFPSGEQF 801
Query: 436 ----FSLVSDAAYISASLARIMRALFETCLRRGWCEMSLF-MLEYCKAVDRQIWPHQ-HP 489
F+ + + + A + R++R + + C ++L L +++ ++W H
Sbjct: 802 QKHRFTFQQEKSTVFAHVNRVIRCIID-CQAHLKDSVTLCNALGLARSLAARVWDHSPFQ 860
Query: 490 LRQFDKELPAEILRKLEERGAD-LDRLQEMEEKDIG-ALIRYTPGGRLVKQYLGYFPSIQ 547
++Q +K L A +RKL G D + L++ + I AL + G ++++L FP ++
Sbjct: 861 MKQIEK-LNATAVRKLVAHGIDSIVALEKSKPHLIDIALSKNQAFGTRLQKHLANFPKLR 919
Query: 548 LSATVS 553
+S ++
Sbjct: 920 VSVKMT 925
Score = 116 (45.9 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 43/173 (24%), Positives = 72/173 (41%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLF-----FFDSSYRPIPLAQQYIGISEPNFAAR 62
+R V LSAT+PN ++A +L N F +RP+ L + G +F+
Sbjct: 406 VRFVALSATIPNSEDIATWLGRNATSQHVPAHREHFGEEFRPVKLQKFVYGY---HFSGN 462
Query: 63 NELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-EVFNNDTHPQ 121
N ++ ++ + M+F +R TV TA++L L L ++ P
Sbjct: 463 NFAFDKLLNSNIIGTHSAKKPIMIFCSTRNSTVSTAKELARLWSMSSRLVRMWKGPNKP- 521
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVC 174
+ ++ DL V HHAG+ DR L E + +G + V +C
Sbjct: 522 --------LPVKHADLKVTTAAGVAFHHAGLETEDRHLVENGYLQGKISV-IC 565
Score = 39 (18.8 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 254 ISSLKDNLNAEVALGTVTNVKEACAWLG 281
+ S+ N+ T+ N ++ WLG
Sbjct: 399 MKSIGSNVRFVALSATIPNSEDIATWLG 426
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 725 (260.3 bits), Expect = 2.5e-68, P = 2.5e-68
Identities = 210/728 (28%), Positives = 347/728 (47%)
Query: 717 KTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY-TP 775
K+IS E + LH + +K VYI+P KA+V+E++ DW + S G +E+TGD T
Sbjct: 67 KSISKEGSFLH---AKGALKTVYISPSKALVQEKLRDWNQKFNSW-GISCLELTGDNETY 122
Query: 776 DLMALLSADIIISTPEKWDGISR---NWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
+ ADII++TPEK+D +SR + + L+++DE+HLL RG LE IV
Sbjct: 123 STKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPRGAALEAIV 182
Query: 833 SRMRYISSQTE------RAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEV 886
SR++ +SS E +VR + +S + N DLA+WL V G+ F +RPV L
Sbjct: 183 SRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEWLKVPTAGIKRFGEEMRPVKLTT 242
Query: 887 HIQGYPG-KFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDE 945
+ GY K + Y + +S K L+F S+R+ + A L Q A +
Sbjct: 243 KVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMTYG 302
Query: 946 TPRQFLGMPE--EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQ 1003
F+ E E L+ +D+ ++ + G+G H+ GL KDRSLVE LF N IQ
Sbjct: 303 YSNPFIKSREQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGDIQ 362
Query: 1004 VLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKA 1063
V+ T+TLA G+NLPAH V+IK T++++ + Y+++ + +LQM GRAGRP +D G
Sbjct: 363 VICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMSGRAGRPPFDDTGMV 422
Query: 1064 VILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFR 1123
+I+ Y+ L VES L L +H AEIV TI A+ ++ +YL+
Sbjct: 423 IIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYV 482
Query: 1124 RLAINPAYYGLED-TEAEGLSSYLSRLVQNTFEDLEDSGCVKMTED--TVEPTMLGTIAS 1180
R+ NP Y ++ + + +L L +L + D ++P G + +
Sbjct: 483 RMKKNPENYAIKKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMT 542
Query: 1181 QYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNE----DNHNEALSQRVR 1236
+YYL + T+ N SL+ LHI+ A E + +R NE ++ N R+R
Sbjct: 543 KYYLKFETMKYI-INTPTSYSLDEALHIVCHAEEISWIQLRRNEKKTLNDVNADKEGRLR 601
Query: 1237 FAVDNN---RLDDPHVKANLLFQAHFSRL--DLPISDY--VTDLKSVLDQSIRIIQAMID 1289
F +++N R + LF L D + D D S+ RI + M +
Sbjct: 602 FHINDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMKE 661
Query: 1290 ICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLD 1349
+++ L + + Q LW + L P + L + G+ + + L +
Sbjct: 662 YFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALAE 721
Query: 1350 IPKENLQTVIGN-FPVSR-LHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNS-W 1406
++ V G +P + + L P +V+++++ D + L + + +++
Sbjct: 722 ADPRRIEIVTGRKYPFGNTIKESLSSLPP-KVEIKVEEVDCQKQGISKLAVTLSRVSQPL 780
Query: 1407 KNTSRAFA 1414
++T R +A
Sbjct: 781 QSTKRHYA 788
Score = 475 (172.3 bits), Expect = 4.2e-41, P = 4.2e-41
Identities = 186/686 (27%), Positives = 313/686 (45%)
Query: 3 STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAAR 62
ST +R++ +SAT+PN ++A++L+V P G+ F RP+ L + G + AA+
Sbjct: 197 STLASVRLLAVSATIPNIEDLAEWLKV-PTAGIKRFGEEMRPVKLTTKVFGYA----AAK 251
Query: 63 NELLSEICYKKVV-DSLRQ---GHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDT 118
N+ L E + + D L Q G A+VF +RK + AQKL A Y F +
Sbjct: 252 NDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIK-S 310
Query: 119 HPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATL 178
QL +++ +K + VG H+ G+ + DR L E LF G ++V+ T TL
Sbjct: 311 REQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTL 370
Query: 179 AWGVNLPAHTVVIKGTQLYDPKAGGWRDLG---MLDIFGRAGRPQFDRSGEGIIITSHDK 235
A G+NLPAHTVVIK TQ ++ + G + + +L + GRAGRP FD +G II+T +
Sbjct: 371 AHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMSGRAGRPPFDDTGMVIIMTRRET 430
Query: 236 LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLA 295
+ Y LL +ESQ + L ++L AE+ T++++ A W+ +YL +RMK NP
Sbjct: 431 VHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYVRMKKNPEN 490
Query: 296 YGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQY 355
Y I + I + + L L + +M+ D E GR+ + +Y+++
Sbjct: 491 YAI--KKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMTKYYLKF 548
Query: 356 SSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVE--VKGGP 413
+++ + D E + +V H+ E I +R +NE +TL E ++
Sbjct: 549 ETMKYIINTPTSYSLD-EALHIVCHAEEISWIQLR---RNEKKTLNDVNADKEGRLRFHI 604
Query: 414 SNKHGKISILIQ-----LYI-SRGW------IDTFSLVSDAAYISASLARIMRALFETCL 461
++ GK IQ L++ + W + S+ DA I ++ +RI R + E +
Sbjct: 605 NDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMKEYFI 664
Query: 462 RRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPA--EILRK-LEERGA-DLDRLQE 517
+ + +L K++ +++W L K+LP + K L G + L E
Sbjct: 665 YKKNYKGTLSSTLLAKSLYQKLWDDSPYLL---KQLPGIGMVTAKALHSMGVRSFEALAE 721
Query: 518 MEEKDIGALI-RYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIG-LAITPEFTWKDH 575
+ + I + R P G +K+ L P ++ V + I LA+T
Sbjct: 722 ADPRRIEIVTGRKYPFGNTIKESLSSLPP-KVEIKVEEVDCQKQGISKLAVTLSRV-SQP 779
Query: 576 FHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVS 635
+ + ++ SE +++ H F RM + S TV + PH Q + +
Sbjct: 780 LQSTKRHYADLIVGSEEENLIH---FHEKIRM-EDFSSPYSVTVLLERPHQ-QTKVTVKA 834
Query: 636 DSWLHAEAFYCISFHN-LALPQARTS 660
D L E + I H L L +A +
Sbjct: 835 D--LIFEEYIGIDLHETLLLKKANNN 858
Score = 314 (115.6 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 74/199 (37%), Positives = 117/199 (58%)
Query: 660 SHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTI 719
+HT L + LP GN + + ++F +FN +Q++ F + +H+D N+++ APTGSGKT+
Sbjct: 3 THT-LKSVSDLP----GN--FRSAFSFRYFNSLQSECFPLCFHSDINMIISAPTGSGKTV 55
Query: 720 SAELAMLHLFN-----------TQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVE 768
EL +L LF+ + +K VYI+P KA+V+E++ DW + S G +E
Sbjct: 56 LFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWNQKFNSW-GISCLE 114
Query: 769 MTGDY-TPDLMALLSADIIISTPEKWDGISR---NWHSRNYVKKVGLMILDEIHLLGAER 824
+TGD T + ADII++TPEK+D +SR + + L+++DE+HLL R
Sbjct: 115 LTGDNETYSTKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPR 174
Query: 825 GPILEVIVSRMRYISSQTE 843
G LE IVSR++ +SS E
Sbjct: 175 GAALEAIVSRLKILSSNHE 193
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 712 (255.7 bits), Expect = 9.1e-67, P = 9.1e-67
Identities = 209/638 (32%), Positives = 329/638 (51%)
Query: 668 KPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLH 727
K L T L ++ + ++ F+ FN +Q++ F +Y ++ N ++ +PTGSGKT+ ELA+L
Sbjct: 119 KCLSTTILPDS-FRGVFKFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAILR 177
Query: 728 LFN-TQSDM---KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSA 783
L T SD K++YIAP K++ E +W V+ L M+ + A
Sbjct: 178 LIKETNSDTNNTKIIYIAPTKSLCYEMYKNWFPSFVN-LSVGMLTSDTSFLETEKAK-KC 235
Query: 784 DIIISTPEKWDGISRNW--HSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQ 841
+III+TPEKWD ++R W +SR + + V L+++DEIH + +RG LEVI++RM +
Sbjct: 236 NIIITTPEKWDLLTRRWSDYSRLF-ELVKLVLVDEIHTIKEKRGASLEVILTRMNTMCQN 294
Query: 842 TERAVRFIGLSTALANAGDLADWLGVG-EI--GLFNFKPSVRPVPLEVHIQGYPGKFYCP 898
+RF+ LS + N DLA WL E+ + +F S R V L + GY F C
Sbjct: 295 ----IRFVALSATVPNIEDLALWLKTNNELPANILSFDESYRQVQLTKFVYGY--SFNCK 348
Query: 899 RMNSMNKPA-YAA-----ICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG 952
N K A Y + I H+ +PVLIF +R T TA L+ ++ ++
Sbjct: 349 --NDFQKDAIYNSKLIEIIEKHADNRPVLIFCPTRASTISTAKFLLNNHIFSKSKKRCNH 406
Query: 953 MPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA 1012
P +D+ L + +Q GI HHAG++ +DR+ VE+ F I +L TSTLA
Sbjct: 407 NP-----------SDKILNECMQQGIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLA 455
Query: 1013 WGVNLPAHLVIIKGTEYYDG-KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPK 1071
GVNLPA+LVIIKGT+ ++ + + Y D D+LQM+GRAGRPQ++ HG AVI+
Sbjct: 456 VGVNLPAYLVIIKGTKSWNSSEIQEYSDL---DVLQMIGRAGRPQFETHGCAVIMTDSKM 512
Query: 1072 KSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAY 1131
K Y+ ++ +ESSL L +H AE T++ E AV++L T+ + R NPA
Sbjct: 513 KQTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRFGKNPAA 572
Query: 1132 YGLEDTEAEGLS---SYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVT 1188
Y + S S +++ Q + L + ++ + T G +++Y+S+ +
Sbjct: 573 YQEVNRYVSFHSVEDSQINQFCQYLLDTLVKVKIIDISNGEYKSTAYGNAMTRHYISFES 632
Query: 1189 VSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDN-HNEA-LSQRVR--FAVDNNR- 1243
+ F N SL+ L++L+ + E+ + VRHNE E LS ++ F + +
Sbjct: 633 MKQF-INAKKFLSLQGILNLLATSEEFSVMRVRHNEKKLFKEINLSPLLKYPFLTEKKQS 691
Query: 1244 --LDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQ 1279
+D K +LL Q L+ P + + L L Q
Sbjct: 692 QIIDRVSQKVSLLIQYELGGLEFPSYEGASKLHQTLVQ 729
Score = 392 (143.0 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 132/481 (27%), Positives = 226/481 (46%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEM--GLFFFDSSYRPIPLAQQYIGISEPNFAARNEL 65
IR V LSAT+PN ++A +L+ N E+ + FD SYR + L + G S F +N+
Sbjct: 295 IRFVALSATVPNIEDLALWLKTNNELPANILSFDESYRQVQLTKFVYGYS---FNCKNDF 351
Query: 66 LSEICYK-KVVDSLRQ---GHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ 121
+ Y K+++ + + ++F +R T+ TA+ L++ +F+
Sbjct: 352 QKDAIYNSKLIEIIEKHADNRPVLIFCPTRASTISTAKFLLNN-------HIFSKSK--- 401
Query: 122 LSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWG 181
K+ +K L E + HHAG+ DR E+ F G + +L T+TLA G
Sbjct: 402 ----KRCNHNPSDKILNECMQQGIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVG 457
Query: 182 VNLPAHTVVIKGTQLYDP-KAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL 240
VNLPA+ V+IKGT+ ++ + + DL +L + GRAGRPQF+ G +I+T Y
Sbjct: 458 VNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVIMTDSKMKQTYE 517
Query: 241 RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGW 300
L+ +ES +L ++L AE +L TV +++ A WL T+ +R NP AY
Sbjct: 518 NLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRFGKNPAAY---- 573
Query: 301 DEVIADPSLSLKQRALVTDAAR-ALDK-AKMMRFDEKSGNFYCTELGRIASHFYIQYSSV 358
EV S + + + + LD K+ D +G + T G + YI + S+
Sbjct: 574 QEVNRYVSFHSVEDSQINQFCQYLLDTLVKVKIIDISNGEYKSTAYGNAMTRHYISFESM 633
Query: 359 ETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQN-----ELETLVQTLCPVEVKGGP 413
+ + ++ ++ ++ +++ S EF + VR E+ L L++ E K
Sbjct: 634 KQFINA-KKFLSLQGILNLLATSEEFSVMRVRHNEKKLFKEINLSPLLKYPFLTEKKQSQ 692
Query: 414 --SNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLF 471
K+S+LIQ + G ++ F A+ + +L + +F C R C + F
Sbjct: 693 IIDRVSQKVSLLIQYEL--GGLE-FPSYEGASKLHQTLVQDKFLVFRHCFRLLKCMVDTF 749
Query: 472 M 472
+
Sbjct: 750 I 750
Score = 37 (18.1 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1133 GLEDTEAEGLSSYLSRLVQNTF 1154
GLE EG S LVQ+ F
Sbjct: 711 GLEFPSYEGASKLHQTLVQDKF 732
Score = 37 (18.1 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 23/82 (28%), Positives = 32/82 (39%)
Query: 473 LEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPG 532
LE CK + ++W F E+ A + G L L EK G LI +
Sbjct: 843 LENCKIENEELW------LTFKVEISATFKSSIWH-GQHLS-LDIETEKSSGELIDFR-- 892
Query: 533 GRLVKQYLGYFPSIQLSATVSP 554
RL L ++SA +SP
Sbjct: 893 -RLQVNKLQSPRGFRISAKISP 913
>UNIPROTKB|H9L351 [details] [associations]
symbol:H9L351 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
EMBL:AADN02064074 Ensembl:ENSGALT00000021750
Ensembl:ENSGALT00000036125 Uniprot:H9L351
Length = 254
Score = 665 (239.2 bits), Expect = 4.4e-64, P = 4.4e-64
Identities = 132/248 (53%), Positives = 169/248 (68%)
Query: 109 EDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGL 168
+ L +F + +++ + + +N +L +L +HHAGM R DR L E LF++
Sbjct: 6 DTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKH 65
Query: 169 LKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIF---GRAGRPQFDRSG 225
++VLV TATLAWGVNLPAHTV+IKGTQ+Y P+ G W +LG LDI GRAGRPQ+D G
Sbjct: 66 IQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKG 125
Query: 226 EGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYL 285
EGI+ITSH +L YYL LL QLPIESQ +S L D LNAE LG V N K+A WLGYTYL
Sbjct: 126 EGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAETVLGNVQNAKDAVNWLGYTYL 185
Query: 286 SIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELG 345
IRM +P YGI D++ DP L ++ LV AA LDK ++++D+K+GNF TELG
Sbjct: 186 YIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELG 245
Query: 346 RIASHFYI 353
RIASH+YI
Sbjct: 246 RIASHYYI 253
Score = 457 (165.9 bits), Expect = 7.2e-42, P = 7.2e-42
Identities = 97/235 (41%), Positives = 140/235 (59%)
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
E L+ Q + L+ L +G +HHAG+ DR+LVE+LFA+ IQVLV T+TLAWGV
Sbjct: 20 EVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGV 79
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPAH VIIKGT+ Y + R+ + DILQM+GRAGRPQYD G+ +++ + +Y
Sbjct: 80 NLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYY 139
Query: 1076 KKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE 1135
L + P+ES + +L D NAE V G + + +DAV++L +TYL+ R+ +P YG+
Sbjct: 140 LSLLNQQLPIESQMVSKLPDMLNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGIS 199
Query: 1136 DTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDT--VEPTMLGTIASQYYLS 1185
+ +G L LV L+ + VK + T + T LG IAS YY++
Sbjct: 200 HDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYIT 254
>UNIPROTKB|I3LAH4 [details] [associations]
symbol:I3LAH4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00640000091272 EMBL:CU104757
Ensembl:ENSSSCT00000025204 OMA:FMKEGSA Uniprot:I3LAH4
Length = 197
Score = 526 (190.2 bits), Expect = 3.1e-49, P = 3.1e-49
Identities = 100/186 (53%), Positives = 128/186 (68%)
Query: 7 MIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELL 66
MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++G+ N + +
Sbjct: 1 MIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNM 60
Query: 67 SEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIK 126
E+CY+ V+ ++ GHQ MVFVH+R TV+TA L++ A+ + F P+ +
Sbjct: 61 DEVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNNGQISYFLPTQGPEYGHAE 120
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
K V KSRNK + ELF +HHAGMLR DR L E LFS G +KVLVCTATLAWGVNLPA
Sbjct: 121 KQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPA 180
Query: 187 HTVVIK 192
H V+IK
Sbjct: 181 HAVIIK 186
Score = 299 (110.3 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 74/192 (38%), Positives = 107/192 (55%)
Query: 846 VRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN 904
+R +GLS L N D+A +L V IGLF F RPVPL G ++N+M+
Sbjct: 2 IRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMD 61
Query: 905 KPAYAAICTHSPT-KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGM--PEED-LQM 960
+ Y ++ V++FV +R T TA+ LI+ A ++ FL PE +
Sbjct: 62 EVCYESVLKQVKAGHQVMVFVHARNATVRTAMSLIERAKNNGQISYFLPTQGPEYGHAEK 121
Query: 961 VLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH 1020
+ + ++ +R+ G +HHAG+ +DR+LVE LF+N I+VLVCT+TLAWGVNLPAH
Sbjct: 122 QVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAH 181
Query: 1021 LVIIKGTEYYDG 1032
VIIK + G
Sbjct: 182 AVIIKVRSFAHG 193
>UNIPROTKB|H9L1I7 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
Ensembl:ENSGALT00000035545 OMA:PRKERIM Uniprot:H9L1I7
Length = 771
Score = 427 (155.4 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 117/314 (37%), Positives = 167/314 (53%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +L+ ++ LP A +E F N IQ++++ +D N+L
Sbjct: 446 HVPALKPKPFGSEEQLVSVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALESDENLL 500
Query: 709 LGAPTGSGKTISAELAMLHLFNTQSDM---------KVVYIAPLKAIVRERMNDWKDRLV 759
L APTG+GKT A + ML +M K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVDEFKIIYIAPMRSLVQEMVGSFGKRLA 560
Query: 760 SQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHL 819
+ G + E+TGD+ + + II+ TPEKWD I+R R Y + V L+ILDEIHL
Sbjct: 561 TY-GINVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLVILDEIHL 619
Query: 820 LGAERGPILEVIVSR-MRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFKP 877
L +RGP+LE +V+R +R I T+ VR +GLS L N D+A +L V GLF F
Sbjct: 620 LHDDRGPVLESLVARAIRNIE-MTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFYFDN 678
Query: 878 SVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDL 937
S RPVPLE G K R MN+ Y I H+ VL+FV SR++T TA +
Sbjct: 679 SFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAI 738
Query: 938 IQFAASDETPRQFL 951
+T FL
Sbjct: 739 RDMCLEKDTLGLFL 752
Score = 300 (110.7 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 57/134 (42%), Positives = 92/134 (68%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFA 60
+E TQ +R+VGLSATLPNY +VA FLRV+P GLF+FD+S+RP+PL Q Y+GI+E
Sbjct: 639 IEMTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAI 698
Query: 61 ARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHP 120
R ++++EI Y+K+++ + +Q +VFVHSRK+T KTA+ + D+ + L +F +
Sbjct: 699 KRFQIMNEIVYEKIMEHAGK-NQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA 757
Query: 121 QLSLIKKDVMKSRN 134
+++ + + +N
Sbjct: 758 STEVLRTEAEQCKN 771
>UNIPROTKB|F1PXD9 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AAEX03017021 Ensembl:ENSCAFT00000018256
OMA:NECHITF Uniprot:F1PXD9
Length = 1835
Score = 233 (87.1 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 112/406 (27%), Positives = 181/406 (44%)
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPS--VRPVPLEVHIQGYPGKF 895
++S AV+ +G+S L N +A WL E+ NF+P + V + I K
Sbjct: 160 LASPLSNAVQIVGMSATLPNLEIVASWLNA-ELYHTNFRPVPLLESVKIGNSIYDSSMKL 218
Query: 896 ---YCPRMNSMNKPAYA-AIC--THSPTKPVLIFVSSRRQTRLTALDLI--QF------- 940
+ P + + ++C T VLIF S++ A D+I +F
Sbjct: 219 VREFQPNLQVKGDEDHVVSLCYETICDNHSVLIFCPSKKWCEKLA-DIIACEFYNLHHQA 277
Query: 941 ---AASDETPRQFLGMPEEDLQMVLSQVT------DQNLRQTLQFGIGLHHAGLNDKDRS 991
S E P L ++ L V+ Q+ D L++T+ +G+ HHAGL ++R
Sbjct: 278 TGLVRSSELPPVVL--EQKGLLEVMDQLKRSPSGLDSVLQKTIPWGVAFHHAGLTFEERD 335
Query: 992 LVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGR 1051
++E F +I+VL TSTL+ GVNLPA VII+ T + G+ +D I QM+GR
Sbjct: 336 IIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPIFGGQP---LD--ILTYKQMVGR 389
Query: 1052 AGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF-PVESSLRDQLHDHFNAE--------IV 1102
AGR D G+++++ +KS L PV S L+ Q + A IV
Sbjct: 390 AGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSCLQRQKGEEVTASMIRAILEIIV 449
Query: 1103 SGTIFHKEDAVHYLSWTYLFRRLAINP--AYYGLEDTEAEGLSSYLSRLVQNTFEDLEDS 1160
G +D Y S T+L + + + + + + + L++N F + ++
Sbjct: 450 GGVASTSQDMQTYASCTFLAASMKEGKLGSQKNQDCVQLGAIEACVMWLLENEFIQITET 509
Query: 1161 GCVKMTEDTV-EPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVF 1205
G TE TV PT LG+ T+S S++ P +L++F
Sbjct: 510 G--DGTEGTVYHPTHLGS---------ATLS---SSLSPTDTLDIF 541
Score = 194 (73.4 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 57/191 (29%), Positives = 99/191 (51%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ APT +GKT+ AEL ML + K ++I P ++ +E+ + L ++G
Sbjct: 19 NLVYSAPTSAGKTLVAELLMLKRV-LEMRKKALFILPFVSVAKEKKY-YLQSLFQEIGIN 76
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AER 824
+ G +P S DI + T E+ +G+ N + +G++++DE+H+LG + R
Sbjct: 77 VDGYMGSTSPT-GHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHR 135
Query: 825 GPILEVIVSRMRYIS-----------SQTERAVRFIGLSTALANAGDLADWLGVGEIGLF 873
G +LE++++++ YI+ S AV+ +G+S L N +A WL E+
Sbjct: 136 GYLLELLLTKICYITHKSASCQADLASPLSNAVQIVGMSATLPNLEIVASWLNA-ELYHT 194
Query: 874 NFKPSVRPVPL 884
NF RPVPL
Sbjct: 195 NF----RPVPL 201
Score = 169 (64.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 75/286 (26%), Positives = 135/286 (47%)
Query: 32 EMGLFFFDSSYRPIPLAQQYIGISEPNFAARNEL--LSEICYKKVVDSLRQGHQAMVFVH 89
++G +DSS + L +++ +PN + + + +CY+ + D+ H ++F
Sbjct: 206 KIGNSIYDSSMK---LVREF----QPNLQVKGDEDHVVSLCYETICDN----HSVLIFCP 254
Query: 90 SRKDTVKTAQ----KLVDLARRYEDLEVFNNDTHP----QLSLIK-KDVMKSRNKDLIEL 140
S+K K A + +L + L V +++ P Q L++ D +K L +
Sbjct: 255 SKKWCEKLADIIACEFYNLHHQATGL-VRSSELPPVVLEQKGLLEVMDQLKRSPSGLDSV 313
Query: 141 FGLAV--GV--HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 196
+ GV HHAG+ +R + E F +G ++VL T+TL+ GVNLPA V+I+ T +
Sbjct: 314 LQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPI 372
Query: 197 YDPKAGGWRDLGML---DIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-PIESQ 252
+ GG + L +L + GRAGR D GE I++ + + + + LL L P+ S
Sbjct: 373 F----GG-QPLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSC 427
Query: 253 FISSLKDNLNA-------EVALGTVTNVKEAC-AWLGYTYLSIRMK 290
+ + A E+ +G V + + + T+L+ MK
Sbjct: 428 LQRQKGEEVTASMIRAILEIIVGGVASTSQDMQTYASCTFLAASMK 473
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 605 KRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYC 646
KR+ + L F+ + H P ++ + S H ++FYC
Sbjct: 841 KRLTLKKKSNLMFSDSSAK-HSPNT-VQDLEKSGEHTDSFYC 880
>UNIPROTKB|F1NYH9 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:AADN02009041 IPI:IPI00596471
Ensembl:ENSGALT00000018274 Uniprot:F1NYH9
Length = 995
Score = 350 (128.3 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 146/556 (26%), Positives = 252/556 (45%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ +L L Q D V+ I P AIV+E++ W +S G
Sbjct: 261 NLIYSLPTSGGKTLVAEILILQELLCRQKD--VLMILPYVAIVQEKV--WG---LSSFGI 313
Query: 765 EMVEMTGDYT------PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIH 818
E+ + +Y P + + + I+T EK + + + + +GL+++DE+H
Sbjct: 314 ELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIETDRIDDLGLVVVDELH 373
Query: 819 LLG-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP 877
++G RG +LE+ ++++ Y S T +G+S L N GDL +L E NF+P
Sbjct: 374 MIGEGSRGAVLEMTLAKILYASKNTH----VVGMSATLNNVGDLQKFLQA-EYYTKNFRP 428
Query: 878 -------SVRPVPLEVHIQGYPGKFYCPRMN-----SMNK--PAY-AAICTHS-PTKPVL 921
+R EV + G + +N S+ K P + A+ T P L
Sbjct: 429 VELKEYIKIRDTIYEVDSKAENGFTFSRLLNFKYSSSLEKADPDHIVALVTEVIPKYSCL 488
Query: 922 IFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN----LRQTLQFG 977
IF +++ A + ++ + R ++DL L + + + LRQT+ FG
Sbjct: 489 IFCPTKKNCENVATMVCKYLNKEF--RAHREKEKQDLIKNLKDIGNGSICPVLRQTIPFG 546
Query: 978 IGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRY 1037
+ HH+GL + +R +EE ++ + +L CT+TLA GVNLPA VI++ K+
Sbjct: 547 VAYHHSGLTNDERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYVASEFLKK- 605
Query: 1038 VDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHF 1097
QM+GRAGR D G+++++V E K + + P + + +
Sbjct: 606 -----NQYKQMIGRAGRAGIDNAGESILVVQEKDKHLVRDLITSPL-------ENCYSNL 653
Query: 1098 NAEIVSGTIFHKEDAVHYLSWTYLFRRLAINP--AY----YGLEDTEAEGL--SSYLSRL 1149
EI G + YL + + ++A+ Y + L + + L LS +
Sbjct: 654 LPEITKG--------MQYLLLSLVGLKIAVTQEEVYSFMCHTLLGVQQQLLLKEKSLSEI 705
Query: 1150 VQNTFEDLEDSGCVK------MTEDTVEPTMLG--TIASQYYLSYVTVSMFGSNIGPD-T 1200
V++ E+L + G +K ++ T+ T+LG T +SY + G +
Sbjct: 706 VRDELENLIEKGLLKGKIMDQNSKSTLTVTLLGKATYKGSIDVSYCNLLYKELRKGLEGL 765
Query: 1201 SLEVFLHILSGASEYD 1216
LE LH+L A+ YD
Sbjct: 766 VLESSLHLLYLATPYD 781
Score = 198 (74.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 103/400 (25%), Positives = 179/400 (44%)
Query: 10 IVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGIS----EPNFAARNEL 65
+VG+SATL N ++ +FL+ ++ ++RP+ L ++YI I E + A N
Sbjct: 400 VVGMSATLNNVGDLQKFLQAE------YYTKNFRPVEL-KEYIKIRDTIYEVDSKAENGF 452
Query: 66 -LSEICYKKVVDSLRQG---H-QAMVFVHSRK-------DTVKTAQKLVDLARRYEDLEV 113
S + K SL + H A+V K T K + + + +Y + E
Sbjct: 453 TFSRLLNFKYSSSLEKADPDHIVALVTEVIPKYSCLIFCPTKKNCENVATMVCKYLNKEF 512
Query: 114 FNNDTHPQLSLIK--KDVMKSRNKDLI-ELFGLAVGVHHAGMLRSDRGLTERLFSEGLLK 170
+ + LIK KD+ ++ + V HH+G+ +R E +S G+L
Sbjct: 513 RAHREKEKQDLIKNLKDIGNGSICPVLRQTIPFGVAYHHSGLTNDERKSIEEAYSRGVLC 572
Query: 171 VLVCTATLAWGVNLPAHTVVIKGTQLYDP--KAGGWRDLGMLDIFGRAGRPQFDRSGEGI 228
+L CTATLA GVNLPA V+++ + K ++ + GRAGR D +GE I
Sbjct: 573 LLACTATLAAGVNLPARRVILRAPYVASEFLKKNQYKQM-----IGRAGRAGIDNAGESI 627
Query: 229 IITSHDKLAYYLR-LLTSQLPIESQFISSLKDN-------LNAEVALGTVTNVKEACAWL 280
++ +K + +R L+TS P+E+ + + L + L + V L +E +++
Sbjct: 628 LVVQ-EKDKHLVRDLITS--PLENCYSNLLPEITKGMQYLLLSLVGLKIAVTQEEVYSFM 684
Query: 281 GYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFY 340
+T L ++ +L L E++ D +L ++ L+ K K+M + KS
Sbjct: 685 CHTLLGVQQQL--LLKEKSLSEIVRDELENLIEKGLL--------KGKIMDQNSKS-TLT 733
Query: 341 CTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
T LG+ I S + LR+ + + V+E H
Sbjct: 734 VTLLGKATYKGSIDVSYCNLLYKELRKGL-EGLVLESSLH 772
>UNIPROTKB|F1NMU1 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
Length = 904
Score = 202 (76.2 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 59/210 (28%), Positives = 110/210 (52%)
Query: 706 NVLLGAPTGSGKTISAELAML-HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ APT +GKT+ AEL +L + T+ K ++I P ++ +E+ + L ++
Sbjct: 75 NLVYSAPTSAGKTLVAELLILKRVLETRK--KALFILPFVSVAKEK-KCYLQALFQEVDM 131
Query: 765 EMVEMTGDYTP-DLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-A 822
+ G +P +LL D+ + T EK +G+ N + +G++++DE+H+LG +
Sbjct: 132 RVGGYMGSISPAGRFSLL--DVAVCTIEKANGLINRLIEENQMDSLGVVVVDELHMLGDS 189
Query: 823 ERGPILEVIVSRMRYISSQTER-----------AVRFIGLSTALANAGDLADWLGVGEIG 871
RG +LE++++++RYI+ + + ++ +G+S L N G LA WL E+
Sbjct: 190 HRGYLLELLLTKVRYITEKAAKRKTKMKSPGFGGIQVVGMSATLPNLGLLASWLDA-ELY 248
Query: 872 LFNFKPSVRPVPLEVHIQGYPGKFYCPRMN 901
+F RPVPL+ ++ Y MN
Sbjct: 249 CTDF----RPVPLKEWVK-IGNNIYDSSMN 273
Score = 191 (72.3 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 73/241 (30%), Positives = 113/241 (46%)
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
+ L+ LS + D L++TL +G+ HHAGL +R ++E F + I+VL TSTL+ GV
Sbjct: 357 DQLRRSLSGL-DSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQSTIRVLAATSTLSSGV 415
Query: 1016 NLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY 1075
NLPA VII+ T + G +D + QM GRAGR D G+++++ ++S
Sbjct: 416 NLPARRVIIR-TPMFGGTL---LD--VLTYKQMAGRAGRKGVDTEGESILVCKPSERSKG 469
Query: 1076 KKFLYEPF-PVESSLRDQLHDHFNAE--------IVSGTIFHKEDAVHYLSWTYLFRRLA 1126
L PV S L + + + IVSG +D Y S T L L
Sbjct: 470 TALLQGSLKPVRSCLLRKEGEGVASSMKRAILEIIVSGVANTPDDVQTYASCTLLASSLK 529
Query: 1127 INPAYYGLEDTEAE-G-LSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYL 1184
N E + + G + + ++ L++N F + + K + PT LG+ L
Sbjct: 530 DNKRENEKEQDKVQTGPIEACIAWLLENEFIQVLERADDKKAK-IFHPTHLGSATLSSSL 588
Query: 1185 S 1185
S
Sbjct: 589 S 589
Score = 170 (64.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 88/339 (25%), Positives = 145/339 (42%)
Query: 69 ICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDL-ARRYEDLEVFNNDTHPQLSLIKK 127
+CY+ V D GH ++F S+ +KL D+ AR + L+ + SL
Sbjct: 294 LCYETVCD----GHSVLLFCPSKN----WCEKLADIIAREFYSLQQAEKGSAKNSSLSPV 345
Query: 128 DVMKSRNKDLIE-----LFGL----------AVGVHHAGMLRSDRGLTERLFSEGLLKVL 172
V + ++++ L GL V HHAG+ +R + E F + ++VL
Sbjct: 346 VVDREGIDEVLDQLRRSLSGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQSTIRVL 405
Query: 173 VCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRD-LGMLDIFGRAGRPQFDRSGEGIIIT 231
T+TL+ GVNLPA V+I+ T ++ G D L + GRAGR D GE I++
Sbjct: 406 AATSTLSSGVNLPARRVIIR-TPMF---GGTLLDVLTYKQMAGRAGRKGVDTEGESILVC 461
Query: 232 SHDKLAYYLRLLTSQL-PIESQFI--------SSLKDNLNAEVALGTVTNVKEACAWLGY 282
+ + LL L P+ S + SS+K + + G + +
Sbjct: 462 KPSERSKGTALLQGSLKPVRSCLLRKEGEGVASSMKRAILEIIVSGVANTPDDVQTYASC 521
Query: 283 TYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCT 342
T L+ +K N D+V P + L + + L++A D+K+ F+ T
Sbjct: 522 TLLASSLKDNKRENEKEQDKVQTGPIEACIAWLLENEFIQVLERAD----DKKAKIFHPT 577
Query: 343 ELGRIA-SHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
LG S ++E +++ L+R M S V+E H
Sbjct: 578 HLGSATLSSSLSPTEAMEIFSD-LQRAMK-SFVLENDLH 614
Score = 54 (24.1 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 28/115 (24%), Positives = 54/115 (46%)
Query: 666 DLKPLPV---TALGNNIYEALYNF-SHFNP-IQTQ-----IFHILYHT--D-NNVLLGAP 712
D +P+P+ +GNNIY++ N F P +Q + + + Y T D ++VLL P
Sbjct: 251 DFRPVPLKEWVKIGNNIYDSSMNLVREFQPKLQLKGDEDHVVSLCYETVCDGHSVLLFCP 310
Query: 713 TGSGKTISAELAMLHLFNTQSDMK-VVYIAPLKAIVRERMNDWKDRLVSQLGKEM 766
+ + A++ ++ Q K + L +V +R + D ++ QL + +
Sbjct: 311 SKNWCEKLADIIAREFYSLQQAEKGSAKNSSLSPVVVDR--EGIDEVLDQLRRSL 363
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 460 CLRRGWCEMSLFMLEY 475
C R GW M L + ++
Sbjct: 731 CNRLGWHNMELLLSQF 746
>DICTYBASE|DDB_G0279107 [details] [associations]
symbol:DDB_G0279107 "Helicase POLQ-like"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
ProtClustDB:CLSZ2430718 Uniprot:Q54X98
Length = 1238
Score = 337 (123.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 139/507 (27%), Positives = 237/507 (46%)
Query: 703 TDNNVLLGA------PTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKD 756
+D+N+LLG PT GKT+ AE+ + ++ K ++I P +IV E+ +
Sbjct: 463 SDSNLLLGENLIYSLPTSGGKTLVAEIILFRNLLIKNK-KSLFIFPFVSIVCEKTESMHE 521
Query: 757 RLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDE 816
S L + VE + L ++I T EK + I + +G +++DE
Sbjct: 522 -FSSAL-QIPVEGYHGCNGTIPVLPGKRLLICTIEKANIIVNQLIEDGRLLDIGCVVVDE 579
Query: 817 IHLLG-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNF 875
IH++G ERG +LEV++S++ Y+S + ++ IG+S + N +L W G +
Sbjct: 580 IHMIGDGERGQLLEVLISKLLYMS---KGQIQIIGMSATIPNIDNLQKWFRGGV-----Y 631
Query: 876 KPSVRPVPLEVHIQGYPGKFYCPRMNSM--------NKPAYAAICTHS-PTKPVLIFVSS 926
+ + RPVPL +I+ K Y N + N+ +C P VLIF +S
Sbjct: 632 QGTFRPVPLTEYIK-IGDKLYDKENNLVKSLQGTEANENHTLQLCLEVVPKHSVLIFCAS 690
Query: 927 RRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN-------LRQTLQFGIG 979
+ T AL Q A S P+ L ++ ++++ + N ++ + G+
Sbjct: 691 KLLTVSLAL---QLAKS--FPQAILDNRRDEREILIQLIESSNGCKVEEDFKRMIMAGVA 745
Query: 980 LHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVD 1039
H+A L + +R ++E F + VL TSTL+ GVNLPA VI++ G+ +D
Sbjct: 746 YHNADLTNDEREVIERGFKERSLLVLCATSTLSTGVNLPARRVILRSPRM--GRN--VLD 801
Query: 1040 FPITDILQMMGRAGRPQYDQHGKAVILV-H-EPKKSFYKKFLYEPF-PVESSLRDQLHDH 1096
I QM+GRAGR D+ G+++++ H P K+ KK L P P+ SS+ +
Sbjct: 802 --IRSYRQMVGRAGRAGIDEFGESILMCDHFAPDKA--KKLLTSPMDPLLSSINKNVESF 857
Query: 1097 FNA---EIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNT 1153
I SG K + + S+T+ L + P + T E Y+ +LV ++
Sbjct: 858 QKIILDSICSGIASDKFSILSFFSYTFYSTHL-LPPK----DMTPYE----YIRKLVNDS 908
Query: 1154 FEDLEDSGCVKMTEDTVEPTMLGTIAS 1180
E L SG ++++ + +P TI +
Sbjct: 909 VEALIKSGHIQISCNQPDPNDKKTIGT 935
Score = 203 (76.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 78/298 (26%), Positives = 134/298 (44%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLS 67
I+I+G+SAT+PN + ++ R G F RP+PL + YI I + + N L+
Sbjct: 607 IQIIGMSATIPNIDNLQKWFRGGVYQGTF------RPVPLTE-YIKIGDKLYDKENNLVK 659
Query: 68 EICYKKVVDS--LR------QGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTH 119
+ + ++ L+ H ++F S+ TV A + LA+ + + N
Sbjct: 660 SLQGTEANENHTLQLCLEVVPKHSVLIFCASKLLTVSLA---LQLAKSFPQAILDNRRDE 716
Query: 120 PQL--SLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTAT 177
++ LI+ +D + V H+A + +R + ER F E L VL T+T
Sbjct: 717 REILIQLIESSNGCKVEEDFKRMIMAGVAYHNADLTNDEREVIERGFKERSLLVLCATST 776
Query: 178 LAWGVNLPAHTVVIKGTQLYDPKAG-GWRDL-GMLDIFGRAGRPQFDRSGEGIIITSHDK 235
L+ GVNLPA V+++ P+ G D+ + GRAGR D GE I++ H
Sbjct: 777 LSTGVNLPARRVILRS-----PRMGRNVLDIRSYRQMVGRAGRAGIDEFGESILMCDHFA 831
Query: 236 LAYYLRLLTSQL-PIESQF---ISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRM 289
+LLTS + P+ S + S + + + G ++ ++ YT+ S +
Sbjct: 832 PDKAKKLLTSPMDPLLSSINKNVESFQKIILDSICSGIASDKFSILSFFSYTFYSTHL 889
Score = 42 (19.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 354 QYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVE-VKGG 412
Q +T N+ L+R ++ + + + + + ++Q +L QT+ ++ ++G
Sbjct: 75 QQQKQQTINQPLQRKLSPPQQQQQQQQQQQQQQQQQQQQQQQQLPPPQQTIKSIQPLQGK 134
Query: 413 P--SNK 416
P +NK
Sbjct: 135 PYVNNK 140
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 453 MRALFETCLRRGWCEMSLFMLEYCKAVDRQI 483
M +LF C + GW E+ + Y + +D+ +
Sbjct: 1100 MVSLF--CKKLGWVELEALVNLYIQRLDKGV 1128
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 198 (74.8 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 78/260 (30%), Positives = 122/260 (46%)
Query: 967 DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
D L++T+ +G+ HHAGL ++R ++E F I+VL TSTL+ GVNLPA VII+
Sbjct: 402 DSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR- 460
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF-PV 1085
T + G R +D I QM+GRAGR D G+++++ +KS L PV
Sbjct: 461 TPIFGG---RPLD--ILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPV 515
Query: 1086 ESSLRDQLHDHFNA-------EIVSGTIFHKEDAVH-YLSWTYLFRRLAINPAYYGL--- 1134
S L+ + + EI+ G + +H Y + T+L ++ G+
Sbjct: 516 RSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFL--AASMKEGKQGIQRN 573
Query: 1135 -EDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTV-EPTMLGTIASQYYLSYV-TVSM 1191
E + + + + L++N F ++ + TE V PT LG+ LS T+ +
Sbjct: 574 QESVQLGAIEACVMWLLENEF--IQSTEASDGTEGKVYHPTHLGSATLSSSLSPADTLDI 631
Query: 1192 FGS--NIGPDTSLEVFLHIL 1209
F LE LHIL
Sbjct: 632 FADLQRAMKGFVLENDLHIL 651
Score = 189 (71.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 54/191 (28%), Positives = 99/191 (51%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ APT +GKT+ AEL +L + K ++I P ++ +E+ + L ++G +
Sbjct: 110 NLVYSAPTSAGKTLVAELLILKRV-LEMRKKALFILPFVSVAKEKKY-YLQSLFQEVGIK 167
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AER 824
+ G +P S DI + T E+ +G+ N + +G++++DE+H+LG + R
Sbjct: 168 VDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHR 226
Query: 825 GPILEVIVSRMRYIS-----------SQTERAVRFIGLSTALANAGDLADWLGVGEIGLF 873
G +LE++++++ YI+ S AV+ +G+S L N +A WL E+
Sbjct: 227 GYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATLPNLELVASWLNA-EL--- 282
Query: 874 NFKPSVRPVPL 884
+ RPVPL
Sbjct: 283 -YHTDFRPVPL 292
Score = 174 (66.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 71/243 (29%), Positives = 121/243 (49%)
Query: 32 EMGLFFFDSSYRPIPLAQQYIGISEPNFAARNEL--LSEICYKKVVDSLRQGHQAMVFVH 89
++G +DSS + L +++ EP + + + +CY+ + D+ H ++F
Sbjct: 297 KVGNSIYDSSMK---LVREF----EPMLQVKGDEDHVVSLCYETICDN----HSVLLFCP 345
Query: 90 SRKDTVKTAQKLVDL-ARRYEDLE-----VFNNDTHPQLSLIKKDVMKSRNKDLIEL-FG 142
S+K +KL D+ AR + +L + P + L +K++++ ++ L L G
Sbjct: 346 SKK----WCEKLADIIAREFYNLHHQAEGLVKPSECPPVILEQKELLEVMDQ-LRRLPSG 400
Query: 143 L----------AVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIK 192
L V HHAG+ +R + E F +GL++VL T+TL+ GVNLPA V+I+
Sbjct: 401 LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR 460
Query: 193 GTQLYDPKAGGWRDLGML---DIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-P 248
T ++ GG R L +L + GRAGR D GE I+I + + + + LL L P
Sbjct: 461 -TPIF----GG-RPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKP 514
Query: 249 IES 251
+ S
Sbjct: 515 VRS 517
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 657 ARTSHTELLDLKPLPV---TALGNNIYEALYNF-SHFNPI------QTQIFHILYHT--D 704
A HT D +P+P+ +GN+IY++ F P+ + + + Y T D
Sbjct: 280 AELYHT---DFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICD 336
Query: 705 NN-VLLGAPT 713
N+ VLL P+
Sbjct: 337 NHSVLLFCPS 346
Score = 45 (20.9 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 55/236 (23%), Positives = 106/236 (44%)
Query: 1066 LVHEPKKSFYKKFLYEPFPVESS-LRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRR 1124
LV + + ++K + PFP E L DH + + V GT+ D+ H + L
Sbjct: 1358 LVQQNSMNSFQKECHIPFPAEQHPLGATKIDHLDLKTV-GTMKQSSDS-HGVD--ILTPE 1413
Query: 1125 LAINPAYYGLEDTEAEGLSSYLSRL-VQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYY 1183
+P ++ E GL +L + V T L T++TV+P +L + Q
Sbjct: 1414 ---SPIFHSPILLEENGL--FLKKNEVSVTDSQLNSFLQGYQTQETVKPVIL--LIPQ-- 1464
Query: 1184 LSYVTVSMFGSNIG-PDTSLEVFLHIL--SGASEY---DELP-VRHNEDNHNEALSQRVR 1236
+ G + P+TSL + +L S + +Y ++LP ++ E +E S
Sbjct: 1465 -KRTPTGVEGECLPVPETSLNMSDSLLFDSFSDDYLVKEQLPDMQMKEPLPSEVTSNH-- 1521
Query: 1237 FAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAM--IDI 1290
F+ D+ L + +K + + + + L S+ + + S +D S+++++A+ +DI
Sbjct: 1522 FS-DSLCLQEDLIKKSNVNENQDTHQQLTCSNDESIIFSEMD-SVQMVEALDNVDI 1575
Score = 41 (19.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 17/77 (22%), Positives = 29/77 (37%)
Query: 235 KLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPL 294
K+ Y R S ++ SSL + + T+ N++ +WL + PL
Sbjct: 236 KICYITRKSAS---CQADLASSLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPL 292
Query: 295 AYGIGWDEVIADPSLSL 311
+ I D S+ L
Sbjct: 293 LESVKVGNSIYDSSMKL 309
Score = 38 (18.4 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 950 FLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
F +P + V + + D +++ +F L G D SL E +N +L C S
Sbjct: 287 FRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPS 346
Score = 37 (18.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 652 LALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFN 690
L +PQ RT + P+P T+L N+ ++L F F+
Sbjct: 1460 LLIPQKRTPTGVEGECLPVPETSL--NMSDSLL-FDSFS 1495
>UNIPROTKB|E1BMC0 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
Uniprot:E1BMC0
Length = 2728
Score = 195 (73.7 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 86/294 (29%), Positives = 135/294 (45%)
Query: 923 FVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT------DQNLRQTLQF 976
F S Q +T L S E P L ++ L V+ Q+ D L++T+ +
Sbjct: 493 FYSLHHQAEVTGL-----VRSSELPPVML--EQKGLLEVMDQLKRSPSGLDSVLQKTVPW 545
Query: 977 GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKR 1036
G+ HHAGL ++R ++E F +I+VL TSTL+ GVNLPA VII+ T + G R
Sbjct: 546 GVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPIFSG---R 601
Query: 1037 YVDFPITDILQMMGRAGRPQYD---QHGKAVILVHEPKKSFYKKFLYEPF-PVESSLRDQ 1092
+D I QM+GRAGR D G+++++ +KS L PV S L+
Sbjct: 602 LLD--ILTYKQMVGRAGRKGVDTVGNTGESILVCKNSEKSKGITLLQGSLKPVHSCLQRH 659
Query: 1093 LHDHFNAE--------IVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE---DTEAEG 1141
+ + IV G +D Y S T+L ++ G++ D+ G
Sbjct: 660 EGEEVTSSMIRAILEIIVGGVASTSQDIQTYASCTFL--AASMKEGKQGIQKNKDSVQLG 717
Query: 1142 -LSSYLSRLVQNTFEDLEDSGCVKMTEDTV-EPTMLGTIASQYYLSYV-TVSMF 1192
+ + + L++N F + ++ TE V PT LG+ LS + T+ +F
Sbjct: 718 AIEACVMWLLENEFIQITEAS--DGTEGNVYHPTHLGSATLSSSLSPIDTLDIF 769
Score = 187 (70.9 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 53/191 (27%), Positives = 100/191 (52%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ APT +GKT+ AEL +L + K ++I P ++ +E+ + L ++G +
Sbjct: 242 NLVYSAPTSAGKTLVAELLILKRV-LEMRKKALFILPFVSVAKEKKY-YLQSLFQEVGIK 299
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AER 824
+ G +P S DI + T E+ +G+ N + +G++++DE+H+LG + R
Sbjct: 300 VDGYMGSTSPT-RHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHR 358
Query: 825 GPILEVIVSRMRYISSQT-----------ERAVRFIGLSTALANAGDLADWLGVGEIGLF 873
G +LE++++++ YI+ ++ AV+ +G+S L N +A WL E+
Sbjct: 359 GYLLELLLTKICYITQKSASCQADLAIPLSNAVQIVGMSATLPNLELVASWLNA-EL--- 414
Query: 874 NFKPSVRPVPL 884
+ RPVPL
Sbjct: 415 -YHTDFRPVPL 424
Score = 159 (61.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 74/286 (25%), Positives = 130/286 (45%)
Query: 32 EMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSR 91
++G +DSS + + Q + + + ++S +CY+ V R H ++F S+
Sbjct: 429 KIGNSIYDSSMKLVREFQPMLQVK----GDEDHVVS-LCYETV----RDNHSVLLFCPSK 479
Query: 92 KDTVKTA----QKLVDLARRYEDLEVFNNDTHPQLSLIKK------DVMKSRNKDLIELF 141
K K A ++ L + E + + P + L +K D +K L +
Sbjct: 480 KWCEKLADIIAREFYSLHHQAEVTGLVRSSELPPVMLEQKGLLEVMDQLKRSPSGLDSVL 539
Query: 142 GLAV--GV--HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLY 197
V GV HHAG+ +R + E F +G ++VL T+TL+ GVNLPA V+I+ T ++
Sbjct: 540 QKTVPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPIF 598
Query: 198 DPKAGGWRD-LGMLDIFGRAGRPQFD---RSGEGIIITSHDKLAYYLRLLTSQL-PI--- 249
+G D L + GRAGR D +GE I++ + + + + LL L P+
Sbjct: 599 ---SGRLLDILTYKQMVGRAGRKGVDTVGNTGESILVCKNSEKSKGITLLQGSLKPVHSC 655
Query: 250 ----ESQFISSLKDNLNAEVALGTVTNVKEAC-AWLGYTYLSIRMK 290
E + ++S E+ +G V + + + T+L+ MK
Sbjct: 656 LQRHEGEEVTSSMIRAILEIIVGGVASTSQDIQTYASCTFLAASMK 701
Score = 84 (34.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQY-IGIS----------- 55
++IVG+SATLPN VA +L N E+ + + +RP+PL + IG S
Sbjct: 391 VQIVGMSATLPNLELVASWL--NAEL----YHTDFRPVPLLESIKIGNSIYDSSMKLVRE 444
Query: 56 -EPNFAARNEL--LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDL-ARRYEDL 111
+P + + + +CY+ V R H ++F S+K +KL D+ AR + L
Sbjct: 445 FQPMLQVKGDEDHVVSLCYETV----RDNHSVLLFCPSKK----WCEKLADIIAREFYSL 496
Score = 46 (21.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 657 ARTSHTELLDLKPLPVTA---LGNNIYEALYNF-SHFNPI------QTQIFHILYHT--D 704
A HT D +P+P+ +GN+IY++ F P+ + + + Y T D
Sbjct: 412 AELYHT---DFRPVPLLESIKIGNSIYDSSMKLVREFQPMLQVKGDEDHVVSLCYETVRD 468
Query: 705 NN-VLLGAPT 713
N+ VLL P+
Sbjct: 469 NHSVLLFCPS 478
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 238 YYLRLLTSQLPIESQFISSLKDNL-----NAEVALG---TVTNVKEACAWLGYTYLSIRM 289
Y L LL +++ +Q +S + +L NA +G T+ N++ +WL
Sbjct: 360 YLLELLLTKICYITQKSASCQADLAIPLSNAVQIVGMSATLPNLELVASWLNAELYHTDF 419
Query: 290 KLNPLAYGIGWDEVIADPSLSL 311
+ PL I I D S+ L
Sbjct: 420 RPVPLLESIKIGNSIYDSSMKL 441
>FB|FBgn0002905 [details] [associations]
symbol:mus308 "mutagen-sensitive 308" species:7227
"Drosophila melanogaster" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
Length = 2059
Score = 212 (79.7 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 53/173 (30%), Positives = 96/173 (55%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ APT +GKT+ +E+ ML + KV+ I P ++VRE+M +D L++ G
Sbjct: 251 NLVYSAPTSAGKTLVSEILMLKTV-LERGKKVLLILPFISVVREKMFYMQD-LLTPAGYR 308
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-R 824
+ G YTP S + I T EK + I + ++ +G++++DE+HL+ + R
Sbjct: 309 VEGFYGGYTPP-GGFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGR 367
Query: 825 GPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP 877
G ILE++++++ Y+S + ++ I +S L N L WL E+ + N++P
Sbjct: 368 GYILELLLAKILYMSRRNGLQIQVITMSATLENVQLLQSWLDA-ELYITNYRP 419
Score = 180 (68.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 76/295 (25%), Positives = 130/295 (44%)
Query: 871 GLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN-SMNKPAYAAICTHSPTKPVLIFVSSRRQ 929
GL N V + +E ++G +CP + N A H K + + R +
Sbjct: 452 GLENDSDDVALLCIETLLEGCSVIVFCPSKDWCENLAVQLATAIHVQIKSETV-LGQRLR 510
Query: 930 TRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKD 989
T L A E +Q +P L V+S+ + + HHAGL ++
Sbjct: 511 TNLNP------RAIAEVKQQLRDIPT-GLDGVMSKA--------ITYACAFHHAGLTTEE 555
Query: 990 RSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMM 1049
R ++E F ++VLV TSTL+ GVNLPA V+I+ + + GK + + QM+
Sbjct: 556 RDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIR-SPLFGGKQMSSLTYR-----QMI 609
Query: 1050 GRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF-PVESSLRDQLHDHFNA---EIVSGT 1105
GRAGR D G+++++ +E + + P+ S L H E++S
Sbjct: 610 GRAGRMGKDTLGESILICNEINARMGRDLVVSELQPITSCLDMDGSTHLKRALLEVISSG 669
Query: 1106 IFH-KEDAVHYLSWTYLFRRLAINPAYYGL-EDTEAEGLSSYLSRLVQNTFEDLE 1158
+ + KED +++ T L + A + E+++A ++ L LV+ F L+
Sbjct: 670 VANTKEDIDFFVNCTLLSAQKAFHAKEKPPDEESDANYINDALDFLVEYEFVRLQ 724
Score = 161 (61.7 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 51/136 (37%), Positives = 66/136 (48%)
Query: 144 AVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGG 203
A HHAG+ +R + E F G LKVLV T+TL+ GVNLPA V+I+ + L+ K
Sbjct: 543 ACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIR-SPLFGGKQ-- 599
Query: 204 WRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-PIESQFISSLKDNLN 262
L + GRAGR D GE I+I + L+ S+L PI S +L
Sbjct: 600 MSSLTYRQMIGRAGRMGKDTLGESILICNEINARMGRDLVVSELQPITSCLDMDGSTHLK 659
Query: 263 A---EVALGTVTNVKE 275
EV V N KE
Sbjct: 660 RALLEVISSGVANTKE 675
Score = 44 (20.5 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 395 NELETLVQ-TLCPVEVKGGPSNKHGKISILIQLYIS 429
+++E +Q TLC +E+ G P+ K ++ L Q ++
Sbjct: 1651 HDIEMPIQLTLCQMELVGFPAQKQ-RLQQLYQRMVA 1685
Score = 41 (19.5 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 699 ILYHTDNNVLLGAPTGSGKTISAELAM 725
++ H + ++ PTG K I+ L++
Sbjct: 2003 LVMHLHDELIFEVPTGKAKKIAKVLSL 2029
Score = 37 (18.1 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 1178 IASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRF 1237
I+ Q++ +Y + + + + + F+ ++G Y E E N+A Q V
Sbjct: 1907 ISDQFHQAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINSDVEHLKNQAERQAVNS 1966
Query: 1238 AVDNNRLD 1245
+ + D
Sbjct: 1967 TIQGSAAD 1974
>MGI|MGI:2176740 [details] [associations]
symbol:Helq "helicase, POLQ-like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
[GO:0017117 "single-stranded DNA-dependent ATP-dependent DNA
helicase complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR010995 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2176740 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
SUPFAM:SSF47794 GO:GO:0017116 CTD:113510 OMA:SRPLENC
OrthoDB:EOG4THVSJ EMBL:BC082601 EMBL:BC109169 EMBL:BC109170
EMBL:AK052427 EMBL:AF436846 IPI:IPI00226287 IPI:IPI00886160
IPI:IPI00890018 RefSeq:NP_001074576.1 UniGene:Mm.21469
ProteinModelPortal:Q2VPA6 SMR:Q2VPA6 STRING:Q2VPA6
PhosphoSite:Q2VPA6 PRIDE:Q2VPA6 Ensembl:ENSMUST00000044684
GeneID:191578 KEGG:mmu:191578 UCSC:uc008yhz.1 UCSC:uc012dzs.1
HOGENOM:HOG000110747 InParanoid:Q2VPA6 NextBio:371088 Bgee:Q2VPA6
Genevestigator:Q2VPA6 GO:GO:0017117 Uniprot:Q2VPA6
Length = 1069
Score = 300 (110.7 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 108/384 (28%), Positives = 174/384 (45%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L Q D V+ I P AIV+E+++ + +LG
Sbjct: 313 NLIYSLPTSGGKTLVAEILMLQELLCRQKD--VLMILPYVAIVQEKISSLSSFGI-ELGF 369
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + + +GL+++DE+H++G
Sbjct: 370 FVEEYAGSKGRFPPIKRREKKSLYIATIEKAHSLVNALIETSRLSTLGLVVVDELHMIGE 429
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP--SV 879
RG ILE+ ++++ Y S T+ L+ L + K V
Sbjct: 430 GSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKV 489
Query: 880 RPVPLEVHIQGYPGK-F-------YCPRMNSMNKPAYAAICTHS-PTKPVLIFVSSRRQT 930
EV Q G F Y + M+ A+ T P L+F S++
Sbjct: 490 NDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIPNYSCLVFCPSKKNC 549
Query: 931 RLTALDLIQFAASDETPRQFLGMPE--EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDK 988
A L +F + D + E + L+ + + L++T+ FGI HH+GL +
Sbjct: 550 ENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGLTSE 609
Query: 989 DRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQM 1048
+R L+EE ++ + +L CTSTLA GVNLPA VI++ + KR QM
Sbjct: 610 ERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKR------NQYKQM 663
Query: 1049 MGRAGRPQYDQHGKAVILVHEPKK 1072
+GRAGR D G++++L+ E K
Sbjct: 664 VGRAGRAGIDTAGESILLLQEKDK 687
Score = 176 (67.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 88/402 (21%), Positives = 176/402 (43%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMGLFFF--DSSYRPIPLAQQYIG 53
T + +I+G+SATL N ++ FL+ P E+ F D+ Y A +
Sbjct: 446 TSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMT 505
Query: 54 ISEPNFAARNELLSEICYKKVVDSLRQ---GHQAMVFVHSRKDTVKTAQKLVDLARRYED 110
S +E L ++ ++V + + + +VF S+K+ A+ L ++
Sbjct: 506 FSRLLSYKYSEALKKMDPDRLVALVTEVIPNYSCLVFCPSKKNCENVAEMLC----KFLS 561
Query: 111 LEVFNNDTHPQLSLIK--KDVMKSRNKDLIEL---FGLAVGVHHAGMLRSDRGLTERLFS 165
+ N+ + +IK +++ + +++ FG+A HH+G+ +R L E +S
Sbjct: 562 KDYLNHREKEKCEVIKSLRNIGNGKVCPVLKRTVPFGIAY--HHSGLTSEERKLLEEAYS 619
Query: 166 EGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP--KAGGWRDLGMLDIFGRAGRPQFDR 223
G+L +L CT+TLA GVNLPA V+++ + + K ++ + GRAGR D
Sbjct: 620 TGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQM-----VGRAGRAGIDT 674
Query: 224 SGEGIIITSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACA 278
+GE I++ L L++ L + +F ++ + + L ++ +
Sbjct: 675 AGESILLLQEKDKQQVLELISGPLETCCSHLVEEFTKGIQALFLSLIGLKIAASLGDIYQ 734
Query: 279 WLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGN 338
++ T+ ++ K+ + W E+ D L ++ L L K + +
Sbjct: 735 FMSGTFFGVQQKILLKEKSL-W-EITVDALEHLTEKGL-------LQKDSCGDNEGLECH 785
Query: 339 FYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
F T+LG+ + I + +T L++ + + V+E + H
Sbjct: 786 FRITKLGQASFKGAIDLAYCDTLYRDLKKGL-EGLVLESLLH 826
>UNIPROTKB|D4A4G4 [details] [associations]
symbol:Hfm1 "Protein Hfm1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 IPI:IPI00388911 Ensembl:ENSRNOT00000033855
Uniprot:D4A4G4
Length = 410
Score = 285 (105.4 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 71/191 (37%), Positives = 106/191 (55%)
Query: 633 AVSDSWLHAEAFYCISFHNLALP---QARTSHTELLDLKPLPVTALGNNIYEALYNFSHF 689
A S S + + F SF + P Q TS+ L LK VT + F +F
Sbjct: 224 AFSASGIEKDIFEAPSFSAASQPRDIQGITSNG-LGSLKA--VTEIPAKFRSVFKEFPYF 280
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQS----DMKVVYIAPLKA 745
N IQ++ F L +TD N ++ APTGSGKT+ ELA+ L +MKVVY+AP+KA
Sbjct: 281 NYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEAPLPWLNMKVVYMAPIKA 340
Query: 746 IVRERMNDWKDRLVSQLGKEMVEMTGDYT-PDLMALLSADIIISTPEKWDGISRNWHSRN 804
+ +R +DWK++ +G E+TGD DL + A+II++TPEKWD ++R W +
Sbjct: 341 LCSQRFDDWKEKF-GPIGLTCKELTGDTVMDDLFEIQHANIIMTTPEKWDSMTRKWRDNS 399
Query: 805 YVKKVGLMILD 815
+++ V L ++D
Sbjct: 400 FIQLVRLFLID 410
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 198 (74.8 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 73/250 (29%), Positives = 119/250 (47%)
Query: 967 DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
D L+ T+ +G+ HHAGL ++R ++E F I+VL TSTL+ GVNLPA VII+
Sbjct: 403 DSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR- 461
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF-PV 1085
T + G+ +D I QM+GRAGR D G+++++ +KS L PV
Sbjct: 462 TPVFGGQP---LD--ILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPV 516
Query: 1086 ESSLRDQ---LHDHFNA--EI-VSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE---- 1135
S L+ Q A EI VSG +D Y + T+L + G++
Sbjct: 517 HSCLQSQGEVTSTMIRAILEIIVSGVASTSQDMQTYAACTFL--AADVKEGKQGIQRNRD 574
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSN 1195
D + + + ++ L++N F EP+ GT Y+ +++ + S+
Sbjct: 575 DVQRGAVDACVTWLLENEFIQ------------AAEPSD-GTGGKVYHPTHLGSATLSSS 621
Query: 1196 IGPDTSLEVF 1205
+ P +L++F
Sbjct: 622 LSPTDTLDIF 631
Score = 180 (68.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 72/237 (30%), Positives = 117/237 (49%)
Query: 32 EMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSR 91
++G +DSS + + Q + + + ++S +CY+ V R H +VF S+
Sbjct: 298 KVGNSIYDSSMKLVREFQPLLQVK----GDEDHIVS-LCYETV----RDNHSVLVFCPSK 348
Query: 92 KDTVKTA----QKLVDLARRYEDLEVFNNDTHP----QLSLIKK-DVMKSRNKDLIELFG 142
K K A ++ +L + E L V +++ P Q SL++ D +K L +
Sbjct: 349 KWCEKVADIIAREFYNLHHQPEGL-VKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLK 407
Query: 143 LAV--GV--HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYD 198
V GV HHAG+ +R + E F +GL++VL T+TL+ GVNLPA V+I+
Sbjct: 408 NTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR-----T 462
Query: 199 PKAGGWRDLGML---DIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-PIES 251
P GG + L +L + GRAGR D GE I++ + + + + LL L P+ S
Sbjct: 463 PVFGG-QPLDILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHS 518
Score = 179 (68.1 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 53/192 (27%), Positives = 101/192 (52%)
Query: 706 NVLLGAPTGSGKTISAELAML-HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ APT +GKT+ AEL +L + T+ K ++I P ++ +E+ + L ++G
Sbjct: 111 NLVYSAPTSAGKTLVAELLILKRVLETRK--KALFILPFVSVAKEKKY-YLQSLFQEVGI 167
Query: 765 EMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AE 823
++ G +P S D+ + T E+ +G+ N + +G +++DE+H+LG +
Sbjct: 168 KVDGYMGSTSPT-GRFSSLDVAVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSH 226
Query: 824 RGPILEVIVSRMRYI-----SSQTERA------VRFIGLSTALANAGDLADWLGVGEIGL 872
RG +LE++++++ ++ S Q + A V+ +G+S L N +A WL E+
Sbjct: 227 RGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSATLPNLQLVASWLNA-EL-- 283
Query: 873 FNFKPSVRPVPL 884
+ RPVPL
Sbjct: 284 --YHTDFRPVPL 293
Score = 44 (20.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 657 ARTSHTELLDLKPLPVTA---LGNNIYEALYNF-SHFNPI------QTQIFHILYHT--D 704
A HT D +P+P+ +GN+IY++ F P+ + I + Y T D
Sbjct: 281 AELYHT---DFRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKGDEDHIVSLCYETVRD 337
Query: 705 NN-VLLGAPT 713
N+ VL+ P+
Sbjct: 338 NHSVLVFCPS 347
Score = 42 (19.8 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 1225 DNHNEALSQRVRFAV---DNNRLDDPHVKAN----LLFQAHFSRLDLPISDYVTD 1272
DN N+ LSQ +R ++ D + +D + LL QA S L I D +D
Sbjct: 1731 DNQNQDLSQELRDSLKDSDGSVVDTSFFLQSQDGLLLTQASCSSESLAIIDVASD 1785
Score = 40 (19.1 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 1193 GSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVR 1236
G GP + L H L+ SE E + + ++ L+ + R
Sbjct: 895 GVQWGPHSPLSSSTHSLTSGSEVKEHTFKSQTKSSHKRLASKSR 938
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 198 (74.8 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 73/250 (29%), Positives = 119/250 (47%)
Query: 967 DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
D L+ T+ +G+ HHAGL ++R ++E F I+VL TSTL+ GVNLPA VII+
Sbjct: 403 DSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR- 461
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF-PV 1085
T + G+ +D I QM+GRAGR D G+++++ +KS L PV
Sbjct: 462 TPVFGGQP---LD--ILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPV 516
Query: 1086 ESSLRDQ---LHDHFNA--EI-VSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLE---- 1135
S L+ Q A EI VSG +D Y + T+L + G++
Sbjct: 517 HSCLQSQGEVTSTMIRAILEIIVSGVASTSQDMQTYAACTFL--AADVKEGKQGIQRNRD 574
Query: 1136 DTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSN 1195
D + + + ++ L++N F EP+ GT Y+ +++ + S+
Sbjct: 575 DVQRGAVDACVTWLLENEFIQ------------AAEPSD-GTGGKVYHPTHLGSATLSSS 621
Query: 1196 IGPDTSLEVF 1205
+ P +L++F
Sbjct: 622 LSPTDTLDIF 631
Score = 180 (68.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 72/237 (30%), Positives = 117/237 (49%)
Query: 32 EMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSR 91
++G +DSS + + Q + + + ++S +CY+ V R H +VF S+
Sbjct: 298 KVGNSIYDSSMKLVREFQPLLQVK----GDEDHIVS-LCYETV----RDNHSVLVFCPSK 348
Query: 92 KDTVKTA----QKLVDLARRYEDLEVFNNDTHP----QLSLIKK-DVMKSRNKDLIELFG 142
K K A ++ +L + E L V +++ P Q SL++ D +K L +
Sbjct: 349 KWCEKVADIIAREFYNLHHQPEGL-VKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLK 407
Query: 143 LAV--GV--HHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYD 198
V GV HHAG+ +R + E F +GL++VL T+TL+ GVNLPA V+I+
Sbjct: 408 NTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR-----T 462
Query: 199 PKAGGWRDLGML---DIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-PIES 251
P GG + L +L + GRAGR D GE I++ + + + + LL L P+ S
Sbjct: 463 PVFGG-QPLDILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHS 518
Score = 179 (68.1 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 53/192 (27%), Positives = 101/192 (52%)
Query: 706 NVLLGAPTGSGKTISAELAML-HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ APT +GKT+ AEL +L + T+ K ++I P ++ +E+ + L ++G
Sbjct: 111 NLVYSAPTSAGKTLVAELLILKRVLETRK--KALFILPFVSVAKEKKY-YLQSLFQEVGI 167
Query: 765 EMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AE 823
++ G +P S D+ + T E+ +G+ N + +G +++DE+H+LG +
Sbjct: 168 KVDGYMGSTSPT-GRFSSLDVAVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSH 226
Query: 824 RGPILEVIVSRMRYI-----SSQTERA------VRFIGLSTALANAGDLADWLGVGEIGL 872
RG +LE++++++ ++ S Q + A V+ +G+S L N +A WL E+
Sbjct: 227 RGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSATLPNLQLVASWLNA-EL-- 283
Query: 873 FNFKPSVRPVPL 884
+ RPVPL
Sbjct: 284 --YHTDFRPVPL 293
Score = 44 (20.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 657 ARTSHTELLDLKPLPVTA---LGNNIYEALYNF-SHFNPI------QTQIFHILYHT--D 704
A HT D +P+P+ +GN+IY++ F P+ + I + Y T D
Sbjct: 281 AELYHT---DFRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKGDEDHIVSLCYETVRD 337
Query: 705 NN-VLLGAPT 713
N+ VL+ P+
Sbjct: 338 NHSVLVFCPS 347
Score = 42 (19.8 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 1225 DNHNEALSQRVRFAV---DNNRLDDPHVKAN----LLFQAHFSRLDLPISDYVTD 1272
DN N+ LSQ +R ++ D + +D + LL QA S L I D +D
Sbjct: 1738 DNQNQDLSQELRDSLKDSDGSVVDTSFFLQSQDGLLLTQASCSSESLAIIDVASD 1792
Score = 40 (19.1 bits), Expect = 7.5e-22, Sum P(3) = 7.5e-22
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 1193 GSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVR 1236
G GP + L H L+ SE E + + ++ L+ + R
Sbjct: 893 GVQWGPHSPLSSSTHSLTSGSEVKEHTFKSQTKSSHKRLASKSR 936
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 195 (73.7 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 73/255 (28%), Positives = 118/255 (46%)
Query: 949 QFLGMPEEDLQMVLSQVT------DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKI 1002
Q + + +E L VL+Q+ D L++T+ +G+ HHAGL +R ++E F I
Sbjct: 581 QSISLNQEGLLDVLAQLKRTPAGLDHVLQRTVPWGVAFHHAGLTFDERDILEGAFRQGYI 640
Query: 1003 QVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGK 1062
+VL TSTL+ GVNLPA VII+ T ++G +D I QM+GRAGR D G+
Sbjct: 641 RVLAATSTLSSGVNLPARRVIIR-TPVFNG---HLLD--ILTYKQMVGRAGRKGVDTIGE 694
Query: 1063 AVILVHEPKKSFYKKFLYEPF-PVESSLRDQLHDHFNAE--------IVSGTIFHKEDAV 1113
+V++ E +++ + P+ S L + + IV G +D
Sbjct: 695 SVLVCKEAERAKGMSLIQGSLKPISSCLVKREGEGVTTSMLRAILEIIVGGVASSPQDVR 754
Query: 1114 HYLSWTYLFRRLAINPAYYGLEDTEAEG---LSSYLSRLVQNTFEDLEDSGCVKMTEDTV 1170
Y + T L +A + ++EA + + + L+ N F ++ G V +
Sbjct: 755 MYAACTLLAASIAAEEVHQDGSESEARNKGAIEACIEWLMDNEFIHIQKEGDV----ERY 810
Query: 1171 EPTMLGTIASQYYLS 1185
PT LG+ LS
Sbjct: 811 CPTHLGSATLSSSLS 825
Score = 189 (71.6 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ APT +GKT+ +EL +L ++ K ++I P ++ RE+M + + + G
Sbjct: 317 NLVYSAPTSAGKTLVSELLILKRV-LETRQKAMFILPFVSVAREKMF-YLQNVFQEAGIR 374
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AER 824
+ G T + D+ + T EK +G+ + + +G +++DE+H++G + R
Sbjct: 375 VEGYMGS-TSAAGGFSALDVAVCTIEKANGLVNRLIEEDKLDLLGTVVVDELHMVGDSGR 433
Query: 825 GPILEVIVSRMRYISSQT---------ERAVRFIGLSTALANAGDLADWLGVGEIGLFNF 875
G +LE++++++RYI+ +T V+ IG+S L N LA WL E+ N+
Sbjct: 434 GYLLELLLTKIRYIAQKTATRNSGQSTSTGVQIIGMSATLPNLDLLARWLSA-ELYSTNY 492
Query: 876 KPSVRPVPL 884
RPVPL
Sbjct: 493 ----RPVPL 497
Score = 185 (70.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 84/280 (30%), Positives = 137/280 (48%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFL---------RVNPEM-----GLFFFDSSYRPIPL 47
+ST ++I+G+SATLPN +A++L R P M G +D S + L
Sbjct: 458 QSTSTGVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLMEWVKIGTNIYDGS---LNL 514
Query: 48 AQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVD-LAR 106
+Q+ + P + ++S +C++ V D GH A++F S+ +KL D + R
Sbjct: 515 VRQFTP-ALPIKGDDDHIVS-LCFETVQD----GHSALLFCPSKN----WCEKLADSIGR 564
Query: 107 RYEDL---EVFNNDTHPQLSLIKK---DVM---KSRNKDLIELFGLAV--GV--HHAGML 153
+ +L E+ + +SL ++ DV+ K L + V GV HHAG+
Sbjct: 565 EFYNLHHKEMQSGSGGQSISLNQEGLLDVLAQLKRTPAGLDHVLQRTVPWGVAFHHAGLT 624
Query: 154 RSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRD-LGMLDI 212
+R + E F +G ++VL T+TL+ GVNLPA V+I+ T +++ G D L +
Sbjct: 625 FDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIR-TPVFN---GHLLDILTYKQM 680
Query: 213 FGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL-PIES 251
GRAGR D GE +++ + A + L+ L PI S
Sbjct: 681 VGRAGRKGVDTIGESVLVCKEAERAKGMSLIQGSLKPISS 720
Score = 47 (21.6 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1192 FGSNIGPDTSLEVFLHILSGASEYDELPV-RHN-EDNHNEALSQRV 1235
FG + DT E LH + EL V R N +DN ++ S++V
Sbjct: 1400 FGDSFQLDTQTEKMLHGHDFSHRNVELNVVRENKQDNQVDSTSEKV 1445
Score = 41 (19.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 376 EMVSHSSEFENIVVRDEEQNELETLVQTLCP--VEVKGGPS 414
E++ +E + I V + E+E++V+ V+VK GPS
Sbjct: 2527 ELIYEVAEEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPS 2567
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 432 WIDTFSLVSDAAYISASL 449
W D FS V DA S SL
Sbjct: 1681 WSDQFSTVPDATAHSNSL 1698
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 962 LSQVTDQNLRQTLQFGIGLHHA 983
L +V+D++ + +QF + + HA
Sbjct: 2290 LLKVSDKSPDKGMQFSVSMRHA 2311
Score = 38 (18.4 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 192 KGTQLYDPKAGGWRDLGMLDIF 213
K T+ K G W+DL +F
Sbjct: 130 KRTRTQAKKEGDWKDLAQKLLF 151
>WB|WBGene00020964 [details] [associations]
symbol:polq-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887 KO:K02349
EMBL:FO081687 EMBL:FO081686 RefSeq:NP_498250.3
ProteinModelPortal:A0FLQ6 PaxDb:A0FLQ6 EnsemblMetazoa:W03A3.2
GeneID:175810 KEGG:cel:CELE_W03A3.2 UCSC:W03A3.2 CTD:175810
WormBase:W03A3.2 InParanoid:A0FLQ6 OMA:EASIPEI NextBio:889766
Uniprot:A0FLQ6
Length = 1661
Score = 295 (108.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 107/422 (25%), Positives = 195/422 (46%)
Query: 704 DNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMND----WKDRLV 759
D +++ APT +GK+I AEL + +T KV+++ P ++ RE+++ W+ +
Sbjct: 44 DQHLIFSAPTSAGKSIVAELLSWKVAST--GRKVLFVLPYISVAREKLHQIQRCWRRDDI 101
Query: 760 SQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHL 819
S G G + L A + T EK ++ S ++ +++G++++DE+H+
Sbjct: 102 SVCG-----FIGPQASNPNEWLGA---VCTIEKAASLTNRALSEDWFEEIGMIVVDEMHM 153
Query: 820 L-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPS 878
+ + RG +E ++S++ + VR IG+S + + WL ++ F+
Sbjct: 154 VFDSSRGAHIEHMLSKVLLWNQSALEKVRIIGMSATIPELYRIGKWLDGAKV----FEAR 209
Query: 879 VRPVPLEVHIQ-GYPGKFYCPR--MNSMNKPAYAAICTHS--PTKPVLIFVSSRRQTRLT 933
RP+ L+ HI G + + ++ + S L+ +SS+ T
Sbjct: 210 FRPIVLQNHIVIGSELRKSGDNKVLREFSEDPLILLTEESFRRNSQTLVMISSKLDAEKT 269
Query: 934 ALDLI-QFAASDETPRQFLGMPEEDLQMVL--------SQVTDQNLRQTLQFGIGLHHAG 984
AL++ +F ++T L + +E +L + D+N+ TL +G+ HHAG
Sbjct: 270 ALNIASRFHEINKTDSSLLEILKERANGLLFIKHGLERNGCKDRNVMSTLAWGVAYHHAG 329
Query: 985 LNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITD 1044
L ++R +E F I +LV TSTLA GVNLPA V+IK G + +
Sbjct: 330 LTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKAQPR--GPSA----LTSLN 383
Query: 1045 ILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP--VESSLRDQLHDHFNAEIV 1102
QM+GRAGR + G+ +L+ + + K + P V + RD + + I+
Sbjct: 384 YRQMVGRAGRTGHATRGETYLLIKKCDRDAVLKIIETPIDQGVLTRKRDAERTNLSRFIL 443
Query: 1103 SG 1104
G
Sbjct: 444 EG 445
Score = 232 (86.7 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 90/292 (30%), Positives = 144/292 (49%)
Query: 2 ESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGI-SEPNFA 60
+S +RI+G+SAT+P + ++L G F++ +RPI L Q +I I SE +
Sbjct: 175 QSALEKVRIIGMSATIPELYRIGKWLD-----GAKVFEARFRPIVL-QNHIVIGSELRKS 228
Query: 61 ARNELLSEICYKKVV----DSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYED------ 110
N++L E ++ +S R+ Q +V + S+ D KTA +++A R+ +
Sbjct: 229 GDNKVLREFSEDPLILLTEESFRRNSQTLVMISSKLDAEKTA---LNIASRFHEINKTDS 285
Query: 111 --LEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGV--HHAGMLRSDRGLTERLFSE 166
LE+ + L IK + ++ KD + LA GV HHAG+ +R E F E
Sbjct: 286 SLLEILKERANGLL-FIKHGLERNGCKDRNVMSTLAWGVAYHHAGLTMEERECIELGFRE 344
Query: 167 GLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGE 226
+ +LV T+TLA GVNLPA V+IK Q P A L + GRAGR GE
Sbjct: 345 KNIVILVATSTLASGVNLPAERVLIKA-QPRGPSA--LTSLNYRQMVGRAGRTGHATRGE 401
Query: 227 G-IIITSHDKLAYYLRLLTSQLPIESQFISSLKD----NLNAEVALGTVTNV 273
++I D+ A L+++ + PI+ ++ +D NL+ + G T +
Sbjct: 402 TYLLIKKCDRDAV-LKII--ETPIDQGVLTRKRDAERTNLSRFILEGICTGL 450
>ZFIN|ZDB-GENE-060503-421 [details] [associations]
symbol:helq "helicase, POLQ-like" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR010995 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060503-421 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
EMBL:BX649525 CTD:113510 IPI:IPI00799443 RefSeq:XP_691411.3
UniGene:Dr.86132 Ensembl:ENSDART00000109412 GeneID:562952
KEGG:dre:562952 NextBio:20884669 Uniprot:F1Q4P2
Length = 1010
Score = 291 (107.5 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 133/544 (24%), Positives = 237/544 (43%)
Query: 706 NVLLGAPTGSGKTISAELAML-HLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ--L 762
N++ PT GKT+ AE+ + L + D + I P ++V+E++ + L
Sbjct: 275 NLIYSLPTSGGKTLVAEILIFKELLCRKKD--ALLILPYISLVQEKVRGLSSFGIELDFL 332
Query: 763 GKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+E G + P + + I+T EK + + + + +GL+++DE+H+LG
Sbjct: 333 VEEYAGSKGKFPP-VKRRNKNSLYITTIEKGHSLVNSLIENDRLDNIGLVVVDELHMLGD 391
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLST-----ALANAGDLADWLGVGEIGLF-NF 875
RG ILE+ +S++ Y+S T+ L + A + + E+ +
Sbjct: 392 GSRGAILEMTLSKILYMSKSTQVIGMSATLGNVKDLQSFLRAENYTNNFRPVELKEYVKI 451
Query: 876 KPSVRPV-PLEVHIQGYPG--KF-YCPRMNSMNKPAYAAICTHS-PTKPVLIFVSSRRQT 930
K S+ V P E + F Y M M+ A+ T P + LIF ++++
Sbjct: 452 KDSIYEVDPKEEACFTFSRLLNFKYSSGMQKMDPDHIIALATEVIPQQSCLIFCATKKNC 511
Query: 931 RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN-------LRQTLQFGIGLHHA 983
A + ++ ++F+ E + ++L ++ L++T+ FG+ HH+
Sbjct: 512 ENLAGMICKYLN-----KEFIKHKEAEKAILLGELKSSGNGSLCPVLQKTIPFGLAYHHS 566
Query: 984 GLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPIT 1043
GL +R LVEE +++ + +L CTSTLA G+NLPA VI++ KR +
Sbjct: 567 GLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRSPYVAADFLKR------S 620
Query: 1044 DILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNA--EI 1101
QM+GRAGR D G++++++ + + KK L P +E + LHD +
Sbjct: 621 QYKQMVGRAGRAGIDAMGESILILQDKDINTAKKLLCAP--MEKCYSNLLHDGGRGLLSL 678
Query: 1102 VSGTIFHK-----EDAVHYLSWTYL-FRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFE 1155
+ I K E + T+L + ++P L D E + + + N E
Sbjct: 679 ILSLIGLKITTTVEQVKDLMKGTFLGVQEAQVSPEK-SLWDLTVESIQTLKQK---NLIE 734
Query: 1156 DLEDSGCVKMTEDTVEPTMLG--TIASQYYLSYVTVSMFGSNIGPD-TSLEVFLHILSGA 1212
D ++ ++ T LG T LSY V + G + L FLH++
Sbjct: 735 VSSDEN----NQNILQITRLGRATYKGSVDLSYCDVLYRDLSKGLEGLLLNSFLHLVYLV 790
Query: 1213 SEYD 1216
+ YD
Sbjct: 791 TPYD 794
Score = 174 (66.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 81/337 (24%), Positives = 149/337 (44%)
Query: 9 RIVGLSATLPNYLEVAQFLRVNPEMGLF----------FFDSSYRPIPLAQQYIGISEP- 57
+++G+SATL N ++ FLR F DS Y P + S
Sbjct: 413 QVIGMSATLGNVKDLQSFLRAENYTNNFRPVELKEYVKIKDSIYEVDPKEEACFTFSRLL 472
Query: 58 NF---AARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVF 114
NF + ++ + + + Q ++F ++K+ + L + +Y + E F
Sbjct: 473 NFKYSSGMQKMDPDHIIALATEVIPQ-QSCLIFCATKKN----CENLAGMICKYLNKE-F 526
Query: 115 NNDTHPQLSLIKKDVMKSRNKDLIEL------FGLAVGVHHAGMLRSDRGLTERLFSEGL 168
+ +++ ++ S N L + FGLA HH+G+ +R L E +S G+
Sbjct: 527 IKHKEAEKAILLGELKSSGNGSLCPVLQKTIPFGLAY--HHSGLTSDERKLVEEAYSSGV 584
Query: 169 LKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGI 228
L +L CT+TLA G+NLPA V+++ + A + + GRAGR D GE I
Sbjct: 585 LCLLTCTSTLAAGINLPARRVILRSPYV---AADFLKRSQYKQMVGRAGRAGIDAMGESI 641
Query: 229 IITSHDKLAYYLRLLTSQLPIESQFISSLKDN-------LNAEVALGTVTNVKEACAWLG 281
+I + +LL + P+E + + L D + + + L T V++ +
Sbjct: 642 LILQDKDINTAKKLLCA--PMEKCYSNLLHDGGRGLLSLILSLIGLKITTTVEQVKDLMK 699
Query: 282 YTYLSIR-MKLNPLAYGIGWDEVIADPSLSLKQRALV 317
T+L ++ +++P + WD + + +LKQ+ L+
Sbjct: 700 GTFLGVQEAQVSP-EKSL-WDLTV-ESIQTLKQKNLI 733
>UNIPROTKB|J9P160 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 CTD:113510 EMBL:AAEX03016730 RefSeq:XP_544959.2
Ensembl:ENSCAFT00000044378 GeneID:487837 KEGG:cfa:487837
Uniprot:J9P160
Length = 1072
Score = 291 (107.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 104/401 (25%), Positives = 188/401 (46%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L + D V+ I P AIV+E+++ + +LG
Sbjct: 326 NLIYSLPTSGGKTLVAEILMLQELLCRRRD--VLMILPYVAIVQEKISGLSSFGI-ELGF 382
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + + + +GL+++DE+H++G
Sbjct: 383 FVEEYAGSKGKFPPIKRRGKKSLYIATIEKGNSLVNSLIETGRISSLGLVVVDELHMIGE 442
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDL--ADWLGVGEIGLFNFKP-- 877
RG ILE+ ++++ Y +S+T + + T + + A++ + K
Sbjct: 443 GSRGAILEMTLAKVLY-TSKTTQIIGMSATLTNVEDLQKFLQAEYY-TSQFRPVELKEYL 500
Query: 878 SVRPVPLEVHIQGYPGKFY-----CPRMNSMNK--PAY-AAICTHS-PTKPVLIFVSSRR 928
+ EV + G + C +++ K P + A+ T P L+F +++
Sbjct: 501 KINDAIYEVDSKAENGMTFSRLLNCQYSDTLKKMDPDHLVALATEVIPNHSCLVFCPTKK 560
Query: 929 QTRLTALDLIQFAASDETPRQFLGMPEEDLQMV---LSQVTDQNL----RQTLQFGIGLH 981
A + +F + +Q+L E++ V L ++ NL ++T+ FG+ H
Sbjct: 561 NCENVAEMICRFLS-----KQYLKHREKEKHEVIKNLKNISSGNLCPILKRTIPFGVAYH 615
Query: 982 HAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFP 1041
H+GL +R L+EE ++ + + CTSTLA GVNLPA VI++ KR
Sbjct: 616 HSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR----- 670
Query: 1042 ITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP 1082
QM+GRAGR D G++++++ E K + + P
Sbjct: 671 -NQYKQMIGRAGRAGIDSIGESILILQEKDKQQVLELISRP 710
Score = 200 (75.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 95/396 (23%), Positives = 165/396 (41%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLF--FFDSSYRPIPLAQQYIGISEPNFAA 61
T + +I+G+SATL N ++ +FL+ F Y I A + N
Sbjct: 459 TSKTTQIIGMSATLTNVEDLQKFLQAEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMT 518
Query: 62 RNELL----SEICYKKVVDSLRQ-------GHQAMVFVHSRKDTVKTAQKLVD-LARRYE 109
+ LL S+ K D L H +VF ++K+ A+ + L+++Y
Sbjct: 519 FSRLLNCQYSDTLKKMDPDHLVALATEVIPNHSCLVFCPTKKNCENVAEMICRFLSKQY- 577
Query: 110 DLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLL 169
L+ + H + +K + L V HH+G+ +R L E +S G+L
Sbjct: 578 -LKHREKEKHEVIKNLKNISSGNLCPILKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL 636
Query: 170 KVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGII 229
+ CT+TLA GVNLPA V+++ Y K R+ + GRAGR D GE I+
Sbjct: 637 CLFTCTSTLAAGVNLPARRVILRAP--YVAKEFLKRNQ-YKQMIGRAGRAGIDSIGESIL 693
Query: 230 ITSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTY 284
I L L++ L + +F ++ + + L TN+ + ++ T+
Sbjct: 694 ILQEKDKQQVLELISRPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMCGTF 753
Query: 285 LSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTEL 344
++ K+ + WD I ++ L D +DK K +E +F+ T+L
Sbjct: 754 FGVQQKILLQEKSL-WDITIESLRYLTEKGLLQKDT---IDKPK----EEIQYSFHITKL 805
Query: 345 GRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
GR + I + L++ + + V+E + H
Sbjct: 806 GRASFKGTIDLAYCNILYRDLKKGL-EGLVLESLLH 840
>UNIPROTKB|E2RST3 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 OMA:SRPLENC EMBL:AAEX03016730
Ensembl:ENSCAFT00000014486 Uniprot:E2RST3
Length = 1106
Score = 291 (107.5 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 104/401 (25%), Positives = 188/401 (46%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L + D V+ I P AIV+E+++ + +LG
Sbjct: 360 NLIYSLPTSGGKTLVAEILMLQELLCRRRD--VLMILPYVAIVQEKISGLSSFGI-ELGF 416
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + + + +GL+++DE+H++G
Sbjct: 417 FVEEYAGSKGKFPPIKRRGKKSLYIATIEKGNSLVNSLIETGRISSLGLVVVDELHMIGE 476
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDL--ADWLGVGEIGLFNFKP-- 877
RG ILE+ ++++ Y +S+T + + T + + A++ + K
Sbjct: 477 GSRGAILEMTLAKVLY-TSKTTQIIGMSATLTNVEDLQKFLQAEYY-TSQFRPVELKEYL 534
Query: 878 SVRPVPLEVHIQGYPGKFY-----CPRMNSMNK--PAY-AAICTHS-PTKPVLIFVSSRR 928
+ EV + G + C +++ K P + A+ T P L+F +++
Sbjct: 535 KINDAIYEVDSKAENGMTFSRLLNCQYSDTLKKMDPDHLVALATEVIPNHSCLVFCPTKK 594
Query: 929 QTRLTALDLIQFAASDETPRQFLGMPEEDLQMV---LSQVTDQNL----RQTLQFGIGLH 981
A + +F + +Q+L E++ V L ++ NL ++T+ FG+ H
Sbjct: 595 NCENVAEMICRFLS-----KQYLKHREKEKHEVIKNLKNISSGNLCPILKRTIPFGVAYH 649
Query: 982 HAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFP 1041
H+GL +R L+EE ++ + + CTSTLA GVNLPA VI++ KR
Sbjct: 650 HSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR----- 704
Query: 1042 ITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP 1082
QM+GRAGR D G++++++ E K + + P
Sbjct: 705 -NQYKQMIGRAGRAGIDSIGESILILQEKDKQQVLELISRP 744
Score = 200 (75.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 95/396 (23%), Positives = 165/396 (41%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLF--FFDSSYRPIPLAQQYIGISEPNFAA 61
T + +I+G+SATL N ++ +FL+ F Y I A + N
Sbjct: 493 TSKTTQIIGMSATLTNVEDLQKFLQAEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMT 552
Query: 62 RNELL----SEICYKKVVDSLRQ-------GHQAMVFVHSRKDTVKTAQKLVD-LARRYE 109
+ LL S+ K D L H +VF ++K+ A+ + L+++Y
Sbjct: 553 FSRLLNCQYSDTLKKMDPDHLVALATEVIPNHSCLVFCPTKKNCENVAEMICRFLSKQY- 611
Query: 110 DLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLL 169
L+ + H + +K + L V HH+G+ +R L E +S G+L
Sbjct: 612 -LKHREKEKHEVIKNLKNISSGNLCPILKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVL 670
Query: 170 KVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGII 229
+ CT+TLA GVNLPA V+++ Y K R+ + GRAGR D GE I+
Sbjct: 671 CLFTCTSTLAAGVNLPARRVILRAP--YVAKEFLKRNQ-YKQMIGRAGRAGIDSIGESIL 727
Query: 230 ITSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTY 284
I L L++ L + +F ++ + + L TN+ + ++ T+
Sbjct: 728 ILQEKDKQQVLELISRPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMCGTF 787
Query: 285 LSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTEL 344
++ K+ + WD I ++ L D +DK K +E +F+ T+L
Sbjct: 788 FGVQQKILLQEKSL-WDITIESLRYLTEKGLLQKDT---IDKPK----EEIQYSFHITKL 839
Query: 345 GRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
GR + I + L++ + + V+E + H
Sbjct: 840 GRASFKGTIDLAYCNILYRDLKKGL-EGLVLESLLH 874
>UNIPROTKB|E9PSY5 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1560216 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI01007603 Ensembl:ENSRNOT00000031633 ArrayExpress:E9PSY5
Uniprot:E9PSY5
Length = 805
Score = 281 (104.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 112/421 (26%), Positives = 182/421 (43%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L Q D V+ I P AIV+E+++ + +LG
Sbjct: 309 NLIYSLPTSGGKTLVAEILMLQELLCRQKD--VLLILPYVAIVQEKISSLSSFGI-ELGF 365
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + +GL+++DE+H++G
Sbjct: 366 FVEEYAGSKGRFPPIKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGE 425
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP--SV 879
RG LE+ ++++ Y S T+ L+ L + K V
Sbjct: 426 GSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKV 485
Query: 880 RPVPLEVHIQGYPGKFYCPRMN-----SMNK--P-AYAAICTHS-PTKPVLIFVSSRRQT 930
EV + G + +N ++ K P A+ T P L+F S++
Sbjct: 486 NDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIPNYSCLVFCPSKKNC 545
Query: 931 RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN-------LRQTLQFGIGLHHA 983
A L +F + D +L EE+ ++ + + L++T+ FG+ HH+
Sbjct: 546 ENVAEMLCKFLSRD-----YLNHREEEKGELIKSLRNVGHGKVCPVLKRTIPFGVAYHHS 600
Query: 984 GLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPIT 1043
GL +R L+EE ++ + + CTSTLA GVNLPA VI++ + KR
Sbjct: 601 GLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKR------N 654
Query: 1044 DILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVS 1103
QM+GRAGR D G++++L+ E K + P L D H H E
Sbjct: 655 QYKQMIGRAGRAGIDTAGESILLLQEKDKQQVLGLINGP------LED-CHSHLVEEFTK 707
Query: 1104 G 1104
G
Sbjct: 708 G 708
Score = 164 (62.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 66/262 (25%), Positives = 117/262 (44%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMGLFFF--DSSYRPIPLAQQYIG 53
T + +I+G+SATL N ++ FL+ P E+ F D+ Y A +
Sbjct: 442 TSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMT 501
Query: 54 ISEPNFAARNELLSEICYKKVVDSLRQ---GHQAMVFVHSRKDTVKTAQKLVDLARRYED 110
S ++ L ++ ++V + + + +VF S+K+ A+ L R
Sbjct: 502 FSRLLNYKYSDALKKVDPDRLVALVTEVIPNYSCLVFCPSKKNCENVAEMLCKFLSR--- 558
Query: 111 LEVFNNDTHPQLSLIK--KDVMKSRNKDLIE-LFGLAVGVHHAGMLRSDRGLTERLFSEG 167
+ N+ + LIK ++V + +++ V HH+G+ +R L E +S G
Sbjct: 559 -DYLNHREEEKGELIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTG 617
Query: 168 LLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP--KAGGWRDLGMLDIFGRAGRPQFDRSG 225
+L + CT+TLA GVNLPA V+++ + + K ++ + GRAGR D +G
Sbjct: 618 VLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQM-----IGRAGRAGIDTAG 672
Query: 226 EGIIITSHDKLAYYLRLLTSQL 247
E I++ L L+ L
Sbjct: 673 ESILLLQEKDKQQVLGLINGPL 694
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 944 DETPRQFLGM---PEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKD 989
++ +Q LG+ P ED L + + ++ IGL GL KD
Sbjct: 680 EKDKQQVLGLINGPLEDCHSHLVEEFTKGIQSLFLSLIGLKEKGLLQKD 728
>UNIPROTKB|E9PT19 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1560216
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 IPI:IPI00958253 Ensembl:ENSRNOT00000002974
ArrayExpress:E9PT19 Uniprot:E9PT19
Length = 879
Score = 281 (104.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 112/421 (26%), Positives = 182/421 (43%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L Q D V+ I P AIV+E+++ + +LG
Sbjct: 309 NLIYSLPTSGGKTLVAEILMLQELLCRQKD--VLLILPYVAIVQEKISSLSSFGI-ELGF 365
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + +GL+++DE+H++G
Sbjct: 366 FVEEYAGSKGRFPPIKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGE 425
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP--SV 879
RG LE+ ++++ Y S T+ L+ L + K V
Sbjct: 426 GSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKV 485
Query: 880 RPVPLEVHIQGYPGKFYCPRMN-----SMNK--P-AYAAICTHS-PTKPVLIFVSSRRQT 930
EV + G + +N ++ K P A+ T P L+F S++
Sbjct: 486 NDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIPNYSCLVFCPSKKNC 545
Query: 931 RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN-------LRQTLQFGIGLHHA 983
A L +F + D +L EE+ ++ + + L++T+ FG+ HH+
Sbjct: 546 ENVAEMLCKFLSRD-----YLNHREEEKGELIKSLRNVGHGKVCPVLKRTIPFGVAYHHS 600
Query: 984 GLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPIT 1043
GL +R L+EE ++ + + CTSTLA GVNLPA VI++ + KR
Sbjct: 601 GLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKR------N 654
Query: 1044 DILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVS 1103
QM+GRAGR D G++++L+ E K + P L D H H E
Sbjct: 655 QYKQMIGRAGRAGIDTAGESILLLQEKDKQQVLGLINGP------LED-CHSHLVEEFTK 707
Query: 1104 G 1104
G
Sbjct: 708 G 708
Score = 170 (64.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 93/399 (23%), Positives = 173/399 (43%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMGLFFF--DSSYRPIPLAQQYIG 53
T + +I+G+SATL N ++ FL+ P E+ F D+ Y A +
Sbjct: 442 TSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMT 501
Query: 54 ISEPNFAARNELLSEICYKKVVDSLRQ---GHQAMVFVHSRKDTVKTAQKLVDLARRYED 110
S ++ L ++ ++V + + + +VF S+K+ A+ L R
Sbjct: 502 FSRLLNYKYSDALKKVDPDRLVALVTEVIPNYSCLVFCPSKKNCENVAEMLCKFLSR--- 558
Query: 111 LEVFNNDTHPQLSLIK--KDVMKSRNKDLIE-LFGLAVGVHHAGMLRSDRGLTERLFSEG 167
+ N+ + LIK ++V + +++ V HH+G+ +R L E +S G
Sbjct: 559 -DYLNHREEEKGELIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTG 617
Query: 168 LLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP--KAGGWRDLGMLDIFGRAGRPQFDRSG 225
+L + CT+TLA GVNLPA V+++ + + K ++ + GRAGR D +G
Sbjct: 618 VLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKRNQYKQM-----IGRAGRAGIDTAG 672
Query: 226 EGIIITSHDKLAYYLRLLTSQLP-IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTY 284
E I++ L L+ L S + + + + L + +K A + LG Y
Sbjct: 673 ESILLLQEKDKQQVLGLINGPLEDCHSHLVEEFTKGIQS-LFLSLI-GLKIAES-LGDIY 729
Query: 285 LSIRMKLNPLAYGIGWDEVIADPSL-SLKQRAL--VTDAARALDKAKMMRFDEKSGNFYC 341
+N +G+ ++ + SL + AL +T+ L K +E +F
Sbjct: 730 ----QFMNGTLFGVQQKTLLREKSLWEVTVGALEHLTEKG-LLQKDSHGSPEESRCHFRI 784
Query: 342 TELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
T+LG+ + I + +T L++ + + V+E + H
Sbjct: 785 TKLGQASFKGAIDLTYCDTLYRDLKKGL-EGLVLESLLH 822
>UNIPROTKB|Q8TDG4 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AF436845 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GO:GO:0008026 EMBL:AK128665
EMBL:AC096768 EMBL:BC015428 EMBL:BC095473 EMBL:AL512702
IPI:IPI00152527 IPI:IPI00647582 IPI:IPI00807650 IPI:IPI00889496
RefSeq:NP_598375.2 UniGene:Hs.480101 ProteinModelPortal:Q8TDG4
SMR:Q8TDG4 IntAct:Q8TDG4 STRING:Q8TDG4 PhosphoSite:Q8TDG4
DMDM:296434521 PaxDb:Q8TDG4 PRIDE:Q8TDG4 DNASU:113510
Ensembl:ENST00000295488 GeneID:113510 KEGG:hsa:113510
UCSC:uc003hom.3 UCSC:uc003hoo.1 UCSC:uc003hop.1 CTD:113510
GeneCards:GC04M084328 HGNC:HGNC:18536 HPA:HPA036853 MIM:606769
neXtProt:NX_Q8TDG4 PharmGKB:PA164720529 InParanoid:Q8TDG4
OMA:SRPLENC OrthoDB:EOG4THVSJ PhylomeDB:Q8TDG4 GenomeRNAi:113510
NextBio:78853 ArrayExpress:Q8TDG4 Bgee:Q8TDG4 Genevestigator:Q8TDG4
Uniprot:Q8TDG4
Length = 1101
Score = 279 (103.3 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 102/403 (25%), Positives = 183/403 (45%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L + D V+ I P AIV+E+++ + +LG
Sbjct: 354 NLIYSLPTSGGKTLVAEILMLQELLCCRKD--VLMILPYVAIVQEKISGLSSFGI-ELGF 410
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + I+T EK + + + +GL+++DE+H++G
Sbjct: 411 FVEEYAGSKGRFPPTKRREKKSLYIATIEKGHSLVNSLIETGRIDSLGLVVVDELHMIGE 470
Query: 822 AERGPILEVIVSRMRYISSQT------------ERAVRFIGLS--TALANAGDLADWLGV 867
RG LE+ ++++ Y S T E +F+ T+ +L ++L +
Sbjct: 471 GSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKI 530
Query: 868 GEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHS-PTKPVLIFVSS 926
+ ++ + Y Y + M+ A+ T P L+F S
Sbjct: 531 NDT-IYEVDSKAENGMTFSRLLNYK---YSDTLKKMDPDHLVALVTEVIPNYSCLVFCPS 586
Query: 927 RRQTRLTALDLIQFAASDETPRQFLGMPE-EDLQMV--LSQVTDQNL----RQTLQFGIG 979
++ A + +F + +++L E E +++ L + + NL ++T+ FG+
Sbjct: 587 KKNCENVAEMICKFLS-----KEYLKHKEKEKCEVIKNLKNIGNGNLCPVLKRTIPFGVA 641
Query: 980 LHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVD 1039
HH+GL +R L+EE ++ + + CTSTLA GVNLPA VI++ KR
Sbjct: 642 YHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR--- 698
Query: 1040 FPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP 1082
QM+GRAGR D G++++++ E K + + +P
Sbjct: 699 ---NQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLELITKP 738
Score = 194 (73.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 97/398 (24%), Positives = 174/398 (43%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMG--LFFFDSSYRPIPLAQQYIG 53
T + +I+G+SATL N ++ +FL+ P E+ L D+ Y A+ +
Sbjct: 487 TSKTTQIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMT 546
Query: 54 ISEP-NFAARNEL--LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVD-LARRY- 108
S N+ + L + +V + + +VF S+K+ A+ + L++ Y
Sbjct: 547 FSRLLNYKYSDTLKKMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKFLSKEYL 606
Query: 109 EDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGL 168
+ E + L I + K I FG+A HH+G+ +R L E +S G+
Sbjct: 607 KHKEKEKCEVIKNLKNIGNGNLCPVLKRTIP-FGVAY--HHSGLTSDERKLLEEAYSTGV 663
Query: 169 LKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGI 228
L + CT+TLA GVNLPA V+++ Y K R+ + GRAGR D GE I
Sbjct: 664 LCLFTCTSTLAAGVNLPARRVILRAP--YVAKEFLKRNQ-YKQMIGRAGRAGIDTIGESI 720
Query: 229 IITSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+I L L+T L + +F ++ + + L TN+ + ++ T
Sbjct: 721 LILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGT 780
Query: 284 YLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEK-SGNFYCT 342
+ ++ K+ + W E+ + L ++ L L K + + +E+ NF+ T
Sbjct: 781 FFGVQQKVLLKEKSL-W-EITVESLRYLTEKGL-------LQKDTIYKSEEEVQYNFHIT 831
Query: 343 ELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
+LGR + I + + L++ + + V+E + H
Sbjct: 832 KLGRASFKGTIDLAYCDILYRDLKKGL-EGLVLESLLH 868
>WB|WBGene00021905 [details] [associations]
symbol:helq-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
WormBase:Y55B1AL.3a Uniprot:H2KY86
Length = 923
Score = 274 (101.5 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 121/532 (22%), Positives = 229/532 (43%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN---DWKDRLVSQL 762
N +L PTG+GKT+ AE+ ML + + + P AIV+E+++ ++D +
Sbjct: 186 NCILSLPTGAGKTLIAEVLMLREAIVRK-RNAILVLPYVAIVQEKISALAPFEDAFGINI 244
Query: 763 GKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+E G + P + + ++T EK + + + ++ + +VG++++DE+H++G
Sbjct: 245 -EEYASNKGRFPP-IKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMIGD 302
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKP---- 877
RG ILE ++++ Y + + +G+S L N DL L NF+P
Sbjct: 303 GGRGAILEQLLAKFLYKGTG-----QIVGMSATLPNIDDLKFALRAFVYST-NFRPVELT 356
Query: 878 ---SVRPVPLEVHIQG--YP-GKFYCPRMNSMNKPAYAAICTHS-PTKPVLIFVSSRRQT 930
+ +V G P G + S + + P +IF +++
Sbjct: 357 EFVKIGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNC 416
Query: 931 RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN----LRQTLQFGIGLHHAGLN 986
A+ LI + + LQ LS D+ L+Q + G+ HH+GL
Sbjct: 417 ENVAV-LIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLT 475
Query: 987 DKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDIL 1046
+R VE F I V+ TSTLA GVNLP VIIK G+ + L
Sbjct: 476 QDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMV--GRER----LGKAQYL 529
Query: 1047 QMMGRAGRPQYDQHGKAVILVHEPKKS-FYKKFLYEPFP-VESSLRDQLHDHFNAEIVSG 1104
QM GRAGR +D G + ++ ++ ++++ L P SSL + + + I+
Sbjct: 530 QMAGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSE--ESMGSFILDC 587
Query: 1105 TIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTE--AEGLSSYLSRLVQNTFEDLEDSGC 1162
+ + + + R ++ +Y E E + + S + RL ++ F +E
Sbjct: 588 VVLKLAENIEEIMTAV---RYSL---FYAQESPENIRKLVESSVKRLEEHYFITIEPLEQ 641
Query: 1163 VKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASE 1214
+E + + + + + + S + ++F + PD + + ++S ++
Sbjct: 642 DVASEPSAQASSIPRVPGKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQ 693
Score = 192 (72.6 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 88/299 (29%), Positives = 142/299 (47%)
Query: 9 RIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQY-IG-----ISEP---NF 59
+IVG+SATLPN ++ LR F + +++RP+ L + IG +SE N
Sbjct: 323 QIVGMSATLPNIDDLKFALRA------FVYSTNFRPVELTEFVKIGQTMHQVSENGDLNP 376
Query: 60 AA---RNELLSE----ICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVD-LARRYEDL 111
A N L S IC +++ L + A++F ++K+ A + L
Sbjct: 377 AGDLPTNNLKSTDPDGIC--QLLAKLIPKNSAVIFCPNKKNCENVAVLIAKTLPAHIRQA 434
Query: 112 EVFNNDTHPQLSLIKKDV--MKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLL 169
+ +D Q L D M + K I L G+A HH+G+ + +R E F EGL+
Sbjct: 435 KRAESDAFLQSYLSDNDDERMDAVLKQCI-LSGVAY--HHSGLTQDERKCVEAAFMEGLI 491
Query: 170 KVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGI- 228
V+ T+TLA GVNLP V+IK + + G + L M GRAGR FD G+ I
Sbjct: 492 YVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMA---GRAGRAGFDTKGDCIT 548
Query: 229 IITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAE----VALGTVTNVKEACAWLGYT 283
II + ++ ++ +L S +P +SS ++++ + V L N++E + Y+
Sbjct: 549 IIKAGEEERWFREMLKSDIPRCMSSLSS-EESMGSFILDCVVLKLAENIEEIMTAVRYS 606
>UNIPROTKB|F1RVE2 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:CU467102 EMBL:CU468150 Ensembl:ENSSSCT00000010115
Uniprot:F1RVE2
Length = 1103
Score = 265 (98.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 101/397 (25%), Positives = 177/397 (44%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L + D + I P AIV+E++ + +LG
Sbjct: 356 NLIYSLPTSGGKTLVAEILMLQELLCRRKD--ALMILPYVAIVQEKIAGLSSFGI-ELGF 412
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + + I+T EK + + + +GL+++DE+H++G
Sbjct: 413 FVEEYAGSKGKFPPIKRREKKSLYIATIEKGHSLVNSLIETGRIGGLGLVVVDELHMIGE 472
Query: 822 AERGPILEVIVSRMRYISSQTERAVRFIGLST-----ALANAGDLADWLGVGEIGLFNFK 876
RG LE+ ++++ Y S T+ L+ A A + W E+ + K
Sbjct: 473 GSRGATLEMTLAKILYTSKTTQIVGMSATLNNVEDLQAFLRAEYYSSWFRPVELKEY-LK 531
Query: 877 PSVRPVPLEVHIQGYPGKFYCPRMN-----SMNK--PAY-AAICTHS-PTKPVLIFVSSR 927
+ EV + G + +N ++ K P + A+ T P L+F ++
Sbjct: 532 --INDTIYEVDSKAENGMTFSRLLNYKYSDTLKKLDPDHLVALVTEVIPNHSCLVFCPTK 589
Query: 928 RQTRLTALDLIQFAASDETPRQFLGMPE--EDLQMVLSQVTDQNLRQTLQFGIGLHHAGL 985
+ A + + + + + E ++L+ + L+ T+ FG+ HH+GL
Sbjct: 590 KNCENVAEMICKILSKEYLKHREKEKHELLKNLKAISGGSVCPVLKHTIPFGVAYHHSGL 649
Query: 986 NDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDI 1045
+ +R L+EE + + +L CTSTLA GVNLPA VI++ KR
Sbjct: 650 TNDERKLLEEAHSAGVLCLLTCTSTLAAGVNLPAQRVILRAPYVAKEFLKR------NQY 703
Query: 1046 LQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP 1082
QM+GRAGR D G+++++ E K + + P
Sbjct: 704 KQMIGRAGRAGIDSVGESILIFQEKDKQQVLELISRP 740
Score = 192 (72.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 96/396 (24%), Positives = 168/396 (42%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMG--LFFFDSSYRPIPLAQQYIG 53
T + +IVG+SATL N ++ FLR P E+ L D+ Y A+ +
Sbjct: 489 TSKTTQIVGMSATLNNVEDLQAFLRAEYYSSWFRPVELKEYLKINDTIYEVDSKAENGMT 548
Query: 54 ISEP-NFAARNEL--LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYED 110
S N+ + L L +V + H +VF ++K+ A+ + + + E
Sbjct: 549 FSRLLNYKYSDTLKKLDPDHLVALVTEVIPNHSCLVFCPTKKNCENVAEMICKILSK-EY 607
Query: 111 LEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLK 170
L+ + H L +K S L V HH+G+ +R L E S G+L
Sbjct: 608 LKHREKEKHELLKNLKAISGGSVCPVLKHTIPFGVAYHHSGLTNDERKLLEEAHSAGVLC 667
Query: 171 VLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIII 230
+L CT+TLA GVNLPA V+++ Y K R+ + GRAGR D GE I+I
Sbjct: 668 LLTCTSTLAAGVNLPAQRVILRAP--YVAKEFLKRNQ-YKQMIGRAGRAGIDSVGESILI 724
Query: 231 TSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYL 285
L L++ L + +F ++ + + L T + + ++ T+
Sbjct: 725 FQEKDKQQVLELISRPLENCYSRLVQEFTKGIQTLFLSLIGLKIATTLGDIYHFMSGTFF 784
Query: 286 SIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEK-SGNFYCTEL 344
++ K+ + W E+ + L ++ L L K ++ +E+ +F T+L
Sbjct: 785 GVQQKILLKEKSL-W-EITVESLRYLTEKGL-------LQKDTVLGSEEEFQYSFRITKL 835
Query: 345 GRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
GR + I + + L++ + + V+E + H
Sbjct: 836 GRASFKGTIDLAYCDILYRDLKKGL-EGLVLESLLH 870
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 176 (67.0 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 63/204 (30%), Positives = 102/204 (50%)
Query: 67 SEICYKKVVDSLRQGH--QAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSL 124
S+ + ++V+ LR+ +VFV S+K + A L E + NN Q+ +
Sbjct: 610 SKKTWPEIVNYLRKRELLPMVVFVFSKKRCEEYADWL-------EGINFCNNKEKSQIHM 662
Query: 125 -IKKDV--MKSRNKDLIE------LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCT 175
I+K + +K ++DL + L + VHH G+L + L E LFS+G +KVL T
Sbjct: 663 FIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFAT 722
Query: 176 ATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITS 232
T A G+NLP TV+ + +D G R+L G + GRAGR D +G I++
Sbjct: 723 ETFAMGLNLPTRTVIFSSIRKHD--GNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAY 780
Query: 233 HDKLAYY-LRLLTSQLP--IESQF 253
+ L+ + +T +P ++SQF
Sbjct: 781 NSPLSIATFKEVTMGVPTRLQSQF 804
Score = 168 (64.2 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 919 PVLIFVSSRRQTRLTA--LDLIQFAASDETPRQFLGMPEEDLQMVLSQVTD--QNL--RQ 972
P+++FV S+++ A L+ I F + E + + + E+ + + + D Q L R
Sbjct: 628 PMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFI-EKSITRLKKEDRDLPQILKTRS 686
Query: 973 TLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GI +HH GL + L+E LF+ I+VL T T A G+NLP VI +DG
Sbjct: 687 LLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDG 746
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQ 1092
R + P + QM GRAGR D G +++ + S F V + L+ Q
Sbjct: 747 NGLRELT-P-GEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSI-ATFKEVTMGVPTRLQSQ 803
Query: 1093 LHDHFN 1098
+N
Sbjct: 804 FRLTYN 809
Score = 167 (63.8 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 60/221 (27%), Positives = 107/221 (48%)
Query: 678 NIYEALYNFSHFNPIQTQIFH--ILYHTD--NNVLLGAPTGSGKTISAE--LAMLHLFNT 731
N E + N + P + F +YH + ++V + A T +GKT+ AE +AM H T
Sbjct: 314 NFDELIPNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMT 373
Query: 732 QSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY--TPDLMALLSADIIIST 789
K +Y +P+KA+ ++ D+K+ + ++ TGD PD A+ +I T
Sbjct: 374 ----KTIYTSPIKALSNQKFRDFKETF-DDVNIGLI--TGDVQINPD------ANCLIMT 420
Query: 790 PEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIVSRMRYISSQTERAVRF 848
E S + + ++ V +I DE+H + +RG + E ++ + + V+F
Sbjct: 421 TEILR--SMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIML-------PQHVKF 471
Query: 849 IGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVHI 888
I LS + N + A+W+G + ++ RPVPLE++I
Sbjct: 472 ILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINI 512
Score = 66 (28.3 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPL 47
++ + LSAT+PN E A ++ + ++ + RP+PL
Sbjct: 469 VKFILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPL 508
Score = 43 (20.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 497 LPAEILRKLEERGADLDR 514
+ EILR + RGADL R
Sbjct: 419 MTTEILRSMLYRGADLIR 436
Score = 40 (19.1 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 477 KAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLD-RLQEMEEK 521
+ ++R I P P D+ + L++L E +LD R++ E K
Sbjct: 198 EGMNRGIKPMDSPAENEDQNGQFKELKQLNEIDNELDIRIEANEAK 243
Score = 40 (19.1 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 72 KKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARR 107
K+ V L QG V H+ A+ + +A R
Sbjct: 335 KEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHR 370
Score = 38 (18.4 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 716 GKTISAELAMLHLFNTQSD 734
GK I ++A L+ FN +++
Sbjct: 993 GKVIKKDVAALNEFNAETN 1011
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 203 (76.5 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 51/157 (32%), Positives = 86/157 (54%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT----- 973
PV++F S+R+ AL + A +D++ ++ + +LS+ D+NL Q
Sbjct: 412 PVIVFSFSKRECEFYALKMKSLAFNDDSEKEMVSKVFNSAIEMLSE-EDRNLPQIQNILP 470
Query: 974 -LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GIG+HH+GL + +E LF I+VL T T + G+N+PA V+ +DG
Sbjct: 471 LLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDG 530
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
++R+V P ++ +QM GRAGR D G ++++ E
Sbjct: 531 FSQRWVT-P-SEFVQMSGRAGRRGLDDRGIVIMMIGE 565
Score = 161 (61.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/164 (29%), Positives = 86/164 (52%)
Query: 71 YKKV-VDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYE-DLEVFNNDTHPQLSLI-KK 127
YK V + L+ + +VF S+++ A K+ LA + + E+ + + + ++ ++
Sbjct: 399 YKIVKMIMLKSLNPVIVFSFSKRECEFYALKMKSLAFNDDSEKEMVSKVFNSAIEMLSEE 458
Query: 128 DVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAH 187
D + ++++ L +GVHH+G+L + E LF EGL+KVL T T + G+N+PA
Sbjct: 459 DRNLPQIQNILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAK 518
Query: 188 TVVIKGTQLYDPKAGGW-RDLGMLDIFGRAGRPQFDRSGEGIII 230
TVV + +D + W + + GRAGR D GI+I
Sbjct: 519 TVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLD--DRGIVI 560
Score = 117 (46.2 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 42/159 (26%), Positives = 85/159 (53%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
+VL+ A T +GKT+ AE A+ + +++ +V+Y +P+KA+ ++ ++ ++ G +
Sbjct: 169 SVLVSAHTSAGKTVVAEYAIAQ--SLKNNQRVIYTSPIKALSNQKYREF----AAEFG-D 221
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAER 824
+ MTGD T + +A ++ T E S + +++V ++ DEIH + A R
Sbjct: 222 VGLMTGDVTINP----TATCLVMTTEILR--SMLYRGSEIMREVAWVVFDEIHYMRDATR 275
Query: 825 GPILE--VIV--SRMRYI--SSQTERAVRFIGLSTALAN 857
G + E +I+ ++RY+ S+ A++F T + N
Sbjct: 276 GVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKMHN 314
Score = 67 (28.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 33/137 (24%), Positives = 59/137 (43%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLS 67
+R V LSAT+PN ++ A+++ + +RP PL Q Y F A +E +
Sbjct: 290 VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPL-QHYF------FPAGSEGMH 342
Query: 68 EICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ---LSL 124
I +K V +AM + +K A L + +D ++ T + +
Sbjct: 343 LIVDEKGVFREENFQKAMSSIADKKGD-DPADALAKRKGKGKDKKLNKGGTQEKDDIYKI 401
Query: 125 IKKDVMKSRNKDLIELF 141
+K ++KS N ++ F
Sbjct: 402 VKMIMLKSLNPVIVFSF 418
Score = 66 (28.3 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 769 MTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGPI 827
MTGD T + +A ++ T E S + +++V ++ DEIH + A RG +
Sbjct: 225 MTGDVTINP----TATCLVMTTEILR--SMLYRGSEIMREVAWVVFDEIHYMRDATRGVV 278
Query: 828 LEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
E + + VR++ LS + NA A+W+
Sbjct: 279 WEETIILL-------PDKVRYVFLSATIPNAMQFAEWI 309
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 216 (81.1 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 87/300 (29%), Positives = 131/300 (43%)
Query: 846 VRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPR------ 899
++ +G+S + N G +ADWL + F+P ++V Y K R
Sbjct: 690 LQIVGMSATMPNVGAVADWLQAA-LYQTEFRPVPLEEYIKVGSTIYNKKMEVVRTIPKAA 748
Query: 900 -MNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLTALDLIQFAAS-----DETPRQFL 951
M + +C VLIF SSR+ TA + + + D +F+
Sbjct: 749 DMGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVNVDGENSEFM 808
Query: 952 GMPE--EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+ + L+ S V D L +TL G+ HHAGL ++R +VE + ++VL TS
Sbjct: 809 DIRSAIDALRRSPSGV-DPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATS 867
Query: 1010 TLAWGVNLPAHLVIIK----GTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVI 1065
TLA GVNLPA VI + G ++ DG RY QM GRAGR D G +V+
Sbjct: 868 TLAAGVNLPARRVIFRQPMIGRDFIDGT--RYK--------QMSGRAGRTGIDTKGDSVL 917
Query: 1066 LVHEPKKSFYKKFLYEPFP-VESSLRDQLHD--HFNAEIVSGTIFHKEDAVH-YLSWTYL 1121
+ + L E P ++S L + + H E+V+G I +H Y+ T L
Sbjct: 918 ICKPGELKRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLL 977
Score = 215 (80.7 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 80/299 (26%), Positives = 136/299 (45%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLS 67
++IVG+SAT+PN VA +L+ + + +RP+PL ++YI + + + E++
Sbjct: 690 LQIVGMSATMPNVGAVADWLQAA------LYQTEFRPVPL-EEYIKVGSTIYNKKMEVVR 742
Query: 68 EICYKK---------VVDS----LRQGHQAMVFVHSRKDTVKTAQKLVDLARRYE-DLEV 113
I +V+ +++G+ ++F SRK TA+ + L + +++
Sbjct: 743 TIPKAADMGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVNVDG 802
Query: 114 FNNDTHPQLSLIKKDVMKSRNKD--LIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKV 171
N++ S I D L E V HHAG+ +R + E + +GL++V
Sbjct: 803 ENSEFMDIRSAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRV 862
Query: 172 LVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIIT 231
L T+TLA GVNLPA V+ + + G R M GRAGR D G+ ++I
Sbjct: 863 LTATSTLAAGVNLPARRVIFRQPMIGRDFIDGTRYKQMS---GRAGRTGIDTKGDSVLIC 919
Query: 232 SHDKLAYYLRLLTSQLPIESQFISSLKDNLNAE----VALGTVTNVKEACAWLGYTYLS 286
+L + LL P +S K+ + VA G V K+ ++ T L+
Sbjct: 920 KPGELKRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLN 978
Score = 125 (49.1 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 47/199 (23%), Positives = 95/199 (47%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
N++ A T +GK+ AE+ ML M ++ + P +I E+ + + L+ LGK
Sbjct: 533 NLVYCASTSAGKSFVAEVLMLRRVIRTGKMALL-VLPYVSICAEKA-EHLEVLLEPLGKH 590
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-R 824
+ G+ + + + T EK + + + ++G++++DE+H++G + R
Sbjct: 591 VRSYYGNQGGGTLPK-DTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHR 649
Query: 825 GPILEVIVSRMRYIS---SQTERAVRFIGLSTALAN-------AGDLADWLGVGEIGLFN 874
G +LE++++++RY + S + G S+ A+ G A VG + +
Sbjct: 650 GYLLELMLTKLRYAAGEGSSESSSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWL 709
Query: 875 ----FKPSVRPVPLEVHIQ 889
++ RPVPLE +I+
Sbjct: 710 QAALYQTEFRPVPLEEYIK 728
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 438 LVSDAAYISASLARIMRALFET 459
L + A AS+ I++ALFE+
Sbjct: 1242 LRTSQAIAEASIPEIVKALFES 1263
Score = 38 (18.4 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 1428 VLGNTNTS--------ELYALKRISFSDRLNTHMELPSGI 1459
++GN NT ++ LK + S + T + LP GI
Sbjct: 1564 IMGNVNTRKFTWNLKVQIQVLKSPAISIQRCTRLNLPEGI 1603
Score = 38 (18.4 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWLGVGEIGL 872
+ S ++A G++ +L N D+A+ L G++ L
Sbjct: 1743 LRSLEKKAFELAGMTFSLHNPADIANVL-FGQLKL 1776
Score = 37 (18.1 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 319 DAARALDKAKMMRFDEKSGNFYCTELGR 346
D+ R L K + ++E++ + T LGR
Sbjct: 992 DSLRWLCHRKFLEWNEETKLYTTTPLGR 1019
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 201 (75.8 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 50/157 (31%), Positives = 83/157 (52%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT----- 973
PV++F S+R+ AL + + +D+T R + + LS+ D+ L Q
Sbjct: 456 PVIVFSFSKRECEALALQMSKLDMNDQTERDLVTTIFNNAVNQLSE-KDRELPQIEHILP 514
Query: 974 -LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GIG+HH+GL + ++E LF ++VL T T + G+N+PA V+ +DG
Sbjct: 515 LLRRGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDG 574
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
KT R++ + +QM GRAGR D G ++++ E
Sbjct: 575 KTFRWISGG--EYIQMSGRAGRRGLDDRGIVILMIDE 609
Score = 187 (70.9 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 60/176 (34%), Positives = 96/176 (54%)
Query: 67 SEICYKKV-VDSLRQGHQAMVFVHSRKDTVKTAQKL--VDLARRYE-DL--EVFNNDTHP 120
S+I YK V + ++ + +VF S+++ A ++ +D+ + E DL +FNN +
Sbjct: 440 SDI-YKIVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMNDQTERDLVTTIFNNAVN- 497
Query: 121 QLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAW 180
QLS +KD + + ++ L +G+HH+G+L + + E LF EGLLKVL T T +
Sbjct: 498 QLS--EKDRELPQIEHILPLLRRGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSI 555
Query: 181 GVNLPAHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
G+N+PA TVV + +D K W G + + GRAGR D GI+I D+
Sbjct: 556 GLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLD--DRGIVILMIDE 609
Score = 117 (46.2 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
Y F+ +P Q + ++ VL+ A T +GKT+ AE A+ + + +V+Y +P+
Sbjct: 195 YPFT-LDPFQAVSIACIERQES-VLVSAHTSAGKTVVAEYAVAQ--SLRDKQRVIYTSPI 250
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWH 801
KA+ ++ + L+++ G ++ MTGD T PD L+ I+ S +
Sbjct: 251 KALSNQKYRE----LLAEFG-DVGLMTGDVTINPDATCLVMTTEILR--------SMLYR 297
Query: 802 SRNYVKKVGLMILDEIHLL-GAERGPILE--VIV----SRMRYISSQTERAVRF 848
+++V +I DEIH + ERG + E +I+ S ++S+ A++F
Sbjct: 298 GSEVMREVAWVIFDEIHYMRDKERGVVWEETIILLPDKSHFVFLSATIPNAMQF 351
Score = 70 (29.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 758 LVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILD 815
L+++ G ++ MTGD T PD L+ I+ S + +++V +I D
Sbjct: 261 LLAEFG-DVGLMTGDVTINPDATCLVMTTEILR--------SMLYRGSEVMREVAWVIFD 311
Query: 816 EIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLF 873
EIH + ERG + E + + +++ F+ LS + NA A+W+ +
Sbjct: 312 EIHYMRDKERGVVWEETIILL------PDKS-HFVFLSATIPNAMQFAEWITKIHRQPCH 364
Query: 874 NFKPSVRPVPLEVHI 888
RP PL+ ++
Sbjct: 365 VVYTDFRPTPLQHYL 379
Score = 57 (25.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 11 VGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
V LSAT+PN ++ A+++ + +RP PL Q Y+
Sbjct: 339 VFLSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPL-QHYL 379
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS---VETYNEM 364
SL KQR + T +AL K + E F ++G + I + V T E+
Sbjct: 237 SLRDKQRVIYTSPIKALSNQK---YRELLAEF--GDVGLMTGDVTINPDATCLVMT-TEI 290
Query: 365 LRRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
LR + SEV+ V+ F+ I +RD+E+ + ET++
Sbjct: 291 LRSMLYRGSEVMREVAWVI-FDEIHYMRDKERGVVWEETII 330
Score = 37 (18.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 346 RIASHFYIQYSSVET-YNEMLRRHMNDSEVIEMVSHSSEFENIVVRDE---EQNELETLV 401
R+ S+ +S +E Y E LR+ EV ++ S+ +I+ DE + L L
Sbjct: 877 RLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQLDELNSRKRVLRRLG 936
Query: 402 QTLCP--VEVKG 411
T +EVKG
Sbjct: 937 FTTSDDVIEVKG 948
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 181 (68.8 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 51/159 (32%), Positives = 84/159 (52%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT----- 973
PV++F S+R+ AL + + E+ ++ + + M LS+ DQ L Q
Sbjct: 435 PVIVFNFSKRECENLALKVSTLNFNHESEQKLVEDIFRNAIMSLSE-EDQGLPQIQHLLP 493
Query: 974 -LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GIG+HH+GL + +E LF N I+VL T T + G+N+PA V+ + +DG
Sbjct: 494 LLKKGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFSQVKKFDG 553
Query: 1033 KTKRYVDFPIT--DILQMMGRAGRPQYDQHGKAVILVHE 1069
+R P+T + +QM GRAGR D G ++++ +
Sbjct: 554 VKER----PLTPSEYIQMSGRAGRRGLDDRGIVIMMIDD 588
Score = 165 (63.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 51/161 (31%), Positives = 78/161 (48%)
Query: 79 RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQ--LSLIKKDVMKSRNKD 136
R H +VF S+++ A K+ L +E + D +SL ++D + +
Sbjct: 431 RAYHPVIVFNFSKRECENLALKVSTLNFNHESEQKLVEDIFRNAIMSLSEEDQGLPQIQH 490
Query: 137 LIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 196
L+ L +GVHH+G+L + E LF E L+KVL T T + G+N+PA TVV +
Sbjct: 491 LLPLLKKGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFSQVKK 550
Query: 197 YDP-KAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKL 236
+D K + + GRAGR D G +I+ DKL
Sbjct: 551 FDGVKERPLTPSEYIQMSGRAGRRGLDDRGI-VIMMIDDKL 590
Score = 136 (52.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 49/172 (28%), Positives = 89/172 (51%)
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
Y F +P Q+ I D +VL+ A T +GKT+ AE A+ H + + +V+Y +P+
Sbjct: 173 YAFK-LDPFQS-ISVASIERDESVLVSAHTSAGKTVVAEYAIAHCL--KRNQRVIYTSPI 228
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSR 803
KA+ ++ D++ ++ G ++ MTGD T + +A ++ T E S +
Sbjct: 229 KALSNQKFRDFQ----AEFG-DVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGS 277
Query: 804 NYVKKVGLMILDEIHLL-GAERGPILE--VIV--SRMRYI--SSQTERAVRF 848
++VG ++ DEIH + A RG + E +I+ ++RY+ S+ A +F
Sbjct: 278 EITREVGWVVFDEIHYMRDATRGVVWEETIIMLPDKVRYVFLSATIPNAFQF 329
Score = 79 (32.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 769 MTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGPI 827
MTGD T + +A ++ T E S + ++VG ++ DEIH + A RG +
Sbjct: 249 MTGDVTINP----TASCLVMTTEILR--SMLYRGSEITREVGWVVFDEIHYMRDATRGVV 302
Query: 828 LEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEV 886
E + + VR++ LS + NA A+W+ + RP PL+
Sbjct: 303 WEETIIML-------PDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQN 355
Query: 887 HI 888
++
Sbjct: 356 YV 357
Score = 65 (27.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+R V LSAT+PN + A+++ + +RP PL Q Y+
Sbjct: 314 VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPL-QNYV 357
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 199 (75.1 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 54/181 (29%), Positives = 92/181 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQT---- 973
+PV+IF SRR+ AL + + + + ++ + + L++ D++L
Sbjct: 337 EPVIIFSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNE-EDRSLPAIELML 395
Query: 974 --LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYD 1031
LQ GI +HH+GL + LVE LF ++ L T T A G+N+PA V+ + +D
Sbjct: 396 PLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 455
Query: 1032 GKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSL 1089
G + RY+ + +QM GRAGR D+ G +I++ E + + L +P P+ S+
Sbjct: 456 GDSHRYIGSG--EYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTF 513
Query: 1090 R 1090
R
Sbjct: 514 R 514
Score = 160 (61.4 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 61/200 (30%), Positives = 92/200 (46%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLA-RRYEDLEV----FNNDTHPQLSLI 125
K+V + R+ ++F SR++ + A + L E+ EV FNN L
Sbjct: 326 KIVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQ---CLN 382
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
++D + ++ L + VHH+G+L + L E LF EGL+K L T T A G+N+P
Sbjct: 383 EEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 442
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLR--L 242
A TVV + +D + + G + + GRAGR D G II+ LR +
Sbjct: 443 AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRDMM 502
Query: 243 LTSQLPIESQFISSLKDNLN 262
L P+ S F S LN
Sbjct: 503 LGKPAPLLSTFRLSYYTILN 522
Score = 114 (45.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 646 CISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDN 705
C+ H +A+P T E L ++ + Y F +P Q+ L ++
Sbjct: 43 CV--HEVAVPNDYTPTKEETIHGTLDNPVFNGDMAKT-YPFK-LDPFQSVSVACLERKES 98
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
+L+ A T +GKT AE A+ F + +V+Y +PLKA+ ++ + + K+
Sbjct: 99 -ILVSAHTSAGKTAVAEYAIAMAFRDKQ--RVIYTSPLKALSNQKYRELQHEF-----KD 150
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAER 824
+ MTGD T L +A ++ T E + + +K+V +I DEIH + ER
Sbjct: 151 VGLMTGDVT--LSP--NASCLVMTTEILRAML--YRGSEVLKEVAWVIFDEIHYMKDRER 204
Query: 825 GPILE--VI----VSRMRYISSQTERAVRF 848
G + E +I +M ++S+ A F
Sbjct: 205 GVVWEESIIFLPPAIKMVFLSATMSNATEF 234
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 751 MNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVG 810
+++ K R + K++ MTGD T L +A ++ T E + + +K+V
Sbjct: 136 LSNQKYRELQHEFKDVGLMTGDVT--LSP--NASCLVMTTEILRAML--YRGSEVLKEVA 189
Query: 811 LMILDEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
+I DEIH + ERG + E + + A++ + LS ++NA + A+W+
Sbjct: 190 WVIFDEIHYMKDRERGVVWEESIIFL-------PPAIKMVFLSATMSNATEFAEWI 238
Score = 54 (24.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQY 51
I++V LSAT+ N E A+++ + + +RP PL Q Y
Sbjct: 219 IKMVFLSATMSNATEFAEWICYLHKQPCHVVYTDFRPTPL-QHY 261
Score = 46 (21.3 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 344 LGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFE 385
L ++S F + + + +M ++ D+E++++VS E E
Sbjct: 716 LQELSSRFPLGFPKLHPVKDM---NIQDTEIVDLVSQIEEVE 754
>FB|FBgn0002899 [details] [associations]
symbol:mus301 "mutagen-sensitive 301" species:7227
"Drosophila melanogaster" [GO:0007294 "germarium-derived oocyte
fate determination" evidence=IGI;IMP] [GO:0008298 "intracellular
mRNA localization" evidence=IMP;TAS] [GO:0048477 "oogenesis"
evidence=IGI;TAS] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009949 GO:GO:0007294 EMBL:AE014296 GO:GO:0006417
GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 GO:GO:0008298
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0030717 GO:GO:0016321
GO:GO:0008026 OMA:SRPLENC GO:GO:0009951 EMBL:BT011090
RefSeq:NP_648178.1 UniGene:Dm.15493 SMR:Q9VSE2 IntAct:Q9VSE2
STRING:Q9VSE2 EnsemblMetazoa:FBtr0076689 GeneID:38905
KEGG:dme:Dmel_CG7972 UCSC:CG7972-RA CTD:38905 FlyBase:FBgn0002899
InParanoid:Q9VSE2 OrthoDB:EOG4MKKXB GenomeRNAi:38905 NextBio:810944
Uniprot:Q9VSE2
Length = 1051
Score = 174 (66.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 915 SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQ---VTDQNLR 971
+P L+F SR+ AL L + + + + DL L + + L
Sbjct: 506 APEHCCLVFCPSRKNCENVALLLSRIVPKHKF-FEHRRSEKLDLMDALDKMCGILSPVLA 564
Query: 972 QTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYD 1031
+TL +GI HH+GL +R +E + + V+ CTSTLA GVNLPA VII+ Y
Sbjct: 565 KTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAP--YV 622
Query: 1032 GKTKRYVDF-PITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLR 1090
G+ +F + QM+GRAGR + G+++++ + L+ P S
Sbjct: 623 GQ-----EFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSL 677
Query: 1091 DQ 1092
DQ
Sbjct: 678 DQ 679
Score = 160 (61.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 75/277 (27%), Positives = 124/277 (44%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI----GISEPNFAARN 63
I+IVG+SAT+ N E++ FL N ++ + +RP+ L ++YI + E N A +
Sbjct: 419 IQIVGMSATIGNLSEISSFL--NADV----YTRGFRPVEL-KEYIKCGPDLLEINSAGQT 471
Query: 64 --ELLS-----EICYKKVVDSLRQGHQA------------MVFVHSRKDTVKTAQKLVDL 104
E+ E Y + V H A +VF SRK+ A L +
Sbjct: 472 LEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRI 531
Query: 105 ARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLF 164
+++ E ++ + + K + + L + + HH+G+ +R E +
Sbjct: 532 VPKHKFFEHRRSEKLDLMDALDK-MCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAY 590
Query: 165 SEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRS 224
G++ V+ CT+TLA GVNLPA V+I+ + + M+ GRAGR +
Sbjct: 591 RFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMV---GRAGRAGLGEA 647
Query: 225 GEGIIIT-SHDKLAYYLRLLTSQLPIESQFISSLKDN 260
GE I+I S D L L + P++ +SSL N
Sbjct: 648 GESILIAQSKDNLLVGQMLFS---PMDKA-LSSLDQN 680
Score = 140 (54.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 44/190 (23%), Positives = 96/190 (50%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ--LG 763
N++ PT GKT+ AE+ ML + + V++I P +IV+E+++ + +
Sbjct: 282 NLIYALPTSGGKTLVAEILMLRELLCR-ERNVLFILPYVSIVQEKVSAMSPFAIDLDFIV 340
Query: 764 KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE 823
+E G P + + I++ EK + + ++GL+++DE+HL+G +
Sbjct: 341 EEYTAGKGKCPPQPRRKRRS-LFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEK 399
Query: 824 -RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 882
RG LE ++++ ++++ ++ +G+S + N +++ +L ++ F RPV
Sbjct: 400 GRGATLEAFLTKVMFLNAN----IQIVGMSATIGNLSEISSFLNA-DVYTRGF----RPV 450
Query: 883 PLEVHIQGYP 892
L+ +I+ P
Sbjct: 451 ELKEYIKCGP 460
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 185 (70.2 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 919 PVLIFVSSRRQTRLTALDL--IQFAASDE---TPRQFLG----MPEEDLQMVLSQVTDQN 969
PV+IF S++ + A+ + + F DE F + EED + L QV +N
Sbjct: 404 PVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRR--LPQV--EN 459
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ L+ GIG+HH GL + +E LF I+ L T T A G+N+PA V+
Sbjct: 460 VLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRK 519
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G ++++ E
Sbjct: 520 FDGKKFRWISSG--EYIQMAGRAGRRGLDDKGIVILMIDE 557
Score = 177 (67.4 bits), Expect = 9.4e-09, Sum P(4) = 9.4e-09
Identities = 54/171 (31%), Positives = 85/171 (49%)
Query: 73 KVVDSLRQGHQA--MVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + + + A ++F S+KD A ++ L D EVFNN L
Sbjct: 392 KIVKMIMERNFAPVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDV---LT 448
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
++D + ++++ L +G+HH G+L + E LF EGL+K L T T A G+N+P
Sbjct: 449 EEDRRLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMP 508
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
A TV+ + +D K W G + + GRAGR D +GI+I D+
Sbjct: 509 ARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLD--DKGIVILMIDE 557
Score = 131 (51.2 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRE 749
+P Q Q + +VL+ A T +GKT+ AE A+ + + +V+Y P+KA+ +
Sbjct: 153 DPFQRQAI-LCIDNSQSVLVSAHTSAGKTVVAEYAIAK--SLAAKQRVIYTTPIKALSNQ 209
Query: 750 RMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRN--WHSRNYVK 807
+ ++ D K++ +TGD T + SA +I T E I RN + ++
Sbjct: 210 KFREFTDEF-----KDVGLVTGDVTINP----SASCLIMTTE----ILRNMLYRGSEIMR 256
Query: 808 KVGLMILDEIHLL-GAERGPILE----VIVSRMRYI 838
+VG ++ DEIH + ERG + E ++ +RY+
Sbjct: 257 EVGWVVFDEIHYMRDKERGVVWEETLILLPDNVRYV 292
Score = 80 (33.2 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 764 KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRN--WHSRNYVKKVGLMILDEIHLL- 820
K++ +TGD T + SA +I T E I RN + +++VG ++ DEIH +
Sbjct: 219 KDVGLVTGDVTINP----SASCLIMTTE----ILRNMLYRGSEIMREVGWVVFDEIHYMR 270
Query: 821 GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGLFNFKPSV 879
ERG + E + + VR++ LS + NA A+W+ + +
Sbjct: 271 DKERGVVWEETLILL-------PDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDY 323
Query: 880 RPVPLEVHI 888
RP PL+ +I
Sbjct: 324 RPTPLQHYI 332
Score = 63 (27.2 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+R V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 289 VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPL-QHYI 332
Score = 57 (25.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS---VETYNEM 364
SL+ KQR + T +AL K F ++ F ++G + I S+ + T E+
Sbjct: 190 SLAAKQRVIYTTPIKALSNQKFREFTDE---F--KDVGLVTGDVTINPSASCLIMT-TEI 243
Query: 365 LRRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLVQTLCPVEVK 410
LR + SE++ V F+ I +RD+E+ + ETL+ L P V+
Sbjct: 244 LRNMLYRGSEIMREVGWVV-FDEIHYMRDKERGVVWEETLI--LLPDNVR 290
Score = 43 (20.2 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1198 PDTSLEVFLHILSGASEY-DELPVRHNE 1224
P +++V LH+ A++ D P + NE
Sbjct: 708 PSVTIDVLLHVSEAAAKTGDTEPCKPNE 735
Score = 38 (18.4 bits), Expect = 9.4e-09, Sum P(4) = 9.4e-09
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 1054 RPQYDQHGK 1062
R Q DQHGK
Sbjct: 646 RSQLDQHGK 654
>RGD|1560014 [details] [associations]
symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 60"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0051607 "defense
response to virus" evidence=ISO] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=ISO] [GO:1900246 "positive
regulation of RIG-I signaling pathway" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1560014 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00690000102154 IPI:IPI00358301
Ensembl:ENSRNOT00000019667 Uniprot:F1M4N8
Length = 1304
Score = 167 (63.8 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 693 QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN 752
Q ++ ++ + ++ V++ APT SGKT ++ M + ++ VVY+AP KA+V +
Sbjct: 360 QRELLDVVDNYESAVIV-APTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQVAA 418
Query: 753 DWKDRLVSQLGKEMVEMTGDYTPDLM-ALLSADIIISTPEKWDGISRNWHSRNYVKKVGL 811
++R + V + G +T D L++ ++I+ P ++ + H +N+VK++
Sbjct: 419 TVQNRYTKNMPAGEV-LCGVFTSDYHHEALNSQVLITMPACFEILLLAPHRQNWVKRIRY 477
Query: 812 MILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
+I DE+H +G E R I E ++ +R F+ LS ++N L +WL
Sbjct: 478 VIFDEVHCIGGEIRAEIWEHLLVMIR---------CPFLALSATISNPQHLTEWL 523
Score = 142 (55.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 48/185 (25%), Positives = 90/185 (48%)
Query: 77 SLRQGHQAMVFVHSRKDTVKTAQKLVDLAR--RYEDLEVFNNDTHPQLSLIKKDVMKSRN 134
S R+ Q++++ +K+ +K +++ + Y D + + + L ++ K V R
Sbjct: 785 SSRRLDQSIMYEAEHDYLLKSLEKNLEIPKDCTYADQKAIDEEA---LQMVFKRVKYERK 841
Query: 135 KDLIE-LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKG 193
D ++ L +G HH+ M ++ L E LF +G ++V+ T TL+ G+N+P +VV
Sbjct: 842 GDTLKKLARRGIGYHHSSMTNKEKQLVEILFRKGFIRVVTATRTLSLGINMPCKSVVFAQ 901
Query: 194 TQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLP-IESQ 252
+Y A +R + GRAGR D G+ + L +L+ S++P + Q
Sbjct: 902 NSVY-LDALNYRQMS-----GRAGRRGQDLLGD--VYFFDIPLPKIGKLIKSKVPDLRGQ 953
Query: 253 FISSL 257
F S+
Sbjct: 954 FPLSI 958
Score = 141 (54.7 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 955 EEDLQMVLSQVTDQNLRQTLQF----GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTST 1010
EE LQMV +V + TL+ GIG HH+ + +K++ LVE LF I+V+ T T
Sbjct: 826 EEALQMVFKRVKYERKGDTLKKLARRGIGYHHSSMTNKEKQLVEILFRKGFIRVVTATRT 885
Query: 1011 LAWGVNLPAHLVII-KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
L+ G+N+P V+ + + Y D R QM GRAGR D G
Sbjct: 886 LSLGINMPCKSVVFAQNSVYLDALNYR----------QMSGRAGRRGQDLLG 927
>UNIPROTKB|H9L353 [details] [associations]
symbol:H9L353 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:AADN02064072
Ensembl:ENSGALT00000036127 OMA:CTERLTE Uniprot:H9L353
Length = 98
Score = 222 (83.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 41/93 (44%), Positives = 61/93 (65%)
Query: 733 SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEK 792
S+ + VYI P++A+ + DW ++ +L K++V +TG+ + DL L +IIISTPEK
Sbjct: 6 SEGRCVYITPMEALAEQVFMDWYEKFQERLNKKVVLLTGETSTDLKLLGKGNIIISTPEK 65
Query: 793 WDGISRNWHSRNYVKKVGLMILDEIHLLGAERG 825
WD +SR W R V+ V L I+DE+HL+G E G
Sbjct: 66 WDILSRRWKQRKNVQNVNLFIVDEVHLIGGENG 98
>TAIR|locus:2020573 [details] [associations]
symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
Uniprot:B9DFG3
Length = 1171
Score = 165 (63.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 55/149 (36%), Positives = 78/149 (52%)
Query: 129 VMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHT 188
V +S K L+ G+A HHAG L + E LF GL+KV+ T TLA G+N+PA T
Sbjct: 486 VRESAEKGLLR--GIAA--HHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 541
Query: 189 VVIKGTQLYDPKAGGWR-DLGMLDIF---GRAGRPQFDRSGEGIII-TSHDKLAYYLRLL 243
VI KAG R +LG +++ GRAGR D G +++ T+ + +L+
Sbjct: 542 AVISSLS---KKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLVQTAFEGAEECCKLV 598
Query: 244 TSQL-PIESQFISSLKDNLNAEVALGTVT 271
+ + P+ SQF +S LN VA VT
Sbjct: 599 FAGVKPLVSQFTASYGMVLNL-VAGSKVT 626
Score = 163 (62.4 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 46/185 (24%), Positives = 82/185 (44%)
Query: 886 VHIQGYP-GKFYCPRMNSMNKPAYAAICTHSPTK---PVLIFVSSRRQTRLTALDLIQFA 941
V++ YP K ++ P + H K P + F+ +RR + F
Sbjct: 402 VNVTDYPLSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQ 461
Query: 942 ASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNK 1001
D+ + + + + +++ ++ + L GI HHAG +S +EELF
Sbjct: 462 LLDDCEKSEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGL 521
Query: 1002 IQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
++V+ T TLA G+N+PA +I G + ++ ++ QM GRAGR D+ G
Sbjct: 522 VKVVFATETLAAGINMPARTAVISSLSKKAGNER--IELGPNELYQMAGRAGRRGIDEKG 579
Query: 1062 KAVIL 1066
V++
Sbjct: 580 YTVLV 584
Score = 141 (54.7 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 705 NNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
++V++ APT SGKT+ AE A + ++ Y PLKA+ ++ ++++ G
Sbjct: 170 SSVVVSAPTSSGKTLIAEAAAVS--TVAKGRRLFYTTPLKALSNQKFREFRETF----GD 223
Query: 765 EMVEM-TGD--YTPDL-MALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL 820
+ V + TGD D + +++ +I+ + + G++ + +V + +LDE+H L
Sbjct: 224 DNVGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAI---VLDEVHYL 280
Query: 821 G-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEI-GLFNFKPS 878
RG + E IV Y + V+ I LS +AN +LA W +GEI G S
Sbjct: 281 SDISRGTVWEEIVI---YCPKE----VQLICLSATVANPDELAGW--IGEIHGKTELVTS 331
Query: 879 VR-PVPL 884
R PVPL
Sbjct: 332 TRRPVPL 338
Score = 50 (22.7 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 1397 NIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELP 1456
N+ ++KM K SR R +I+ W + +N ++ + + +NTH+ P
Sbjct: 950 NLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNV--IHESRALD----INTHLIFP 1003
Query: 1457 SGIT 1460
G T
Sbjct: 1004 LGET 1007
Score = 49 (22.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 794 DGIS-RNWHSRNYVKKVGLMILDEIHLLGAERGPILEV 830
+GI R W NY+ + ++D ++ L +R ++++
Sbjct: 1046 EGIKVRPWRDNNYIYEPSDTVVDMVNFLEDQRSSLIKL 1083
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 589 DSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFY 645
D + D + SEL +L + ET S VP+ + + +S+ + +A Y
Sbjct: 863 DMQWDKLAESELGSLWRLEGSLETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKY 919
>UNIPROTKB|Q8IY21 [details] [associations]
symbol:DDX60 "Probable ATP-dependent RNA helicase DDX60"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0009615 "response to
virus" evidence=IDA] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:1900245 "positive regulation of MDA-5 signaling
pathway" evidence=IMP] [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003727 GO:GO:0045087 GO:GO:0051607 GO:GO:0009615
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC068989 EMBL:BC007820
EMBL:BC038115 EMBL:AK001649 IPI:IPI00217606 RefSeq:NP_060101.3
UniGene:Hs.591710 ProteinModelPortal:Q8IY21 SMR:Q8IY21
IntAct:Q8IY21 STRING:Q8IY21 PhosphoSite:Q8IY21 DMDM:296439377
PaxDb:Q8IY21 PRIDE:Q8IY21 Ensembl:ENST00000393743 GeneID:55601
KEGG:hsa:55601 UCSC:uc003irp.3 CTD:55601 GeneCards:GC04M169137
HGNC:HGNC:25942 HPA:HPA046952 MIM:613974 neXtProt:NX_Q8IY21
PharmGKB:PA162383444 eggNOG:COG4581 HOGENOM:HOG000169263
HOVERGEN:HBG107797 InParanoid:Q8IY21 OMA:QDCTYAD OrthoDB:EOG4XSKP0
PhylomeDB:Q8IY21 GenomeRNAi:55601 NextBio:60142 ArrayExpress:Q8IY21
Bgee:Q8IY21 CleanEx:HS_DDX60 Genevestigator:Q8IY21 GO:GO:1900245
GO:GO:1900246 Uniprot:Q8IY21
Length = 1712
Score = 172 (65.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 50/175 (28%), Positives = 88/175 (50%)
Query: 693 QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN 752
Q ++ ++ ++ V++ APT SGKT ++ M + D VVY+AP KA+V +
Sbjct: 768 QRELLDVVDKNESAVIV-APTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALVNQVAA 826
Query: 753 DWKDRLVSQLGKEMVEMTGDYTPDLMA-LLSADIIISTPEKWDGISRNWHSRNYVKKVGL 811
++R L V + G +T + L+ ++I+ P ++ + H +N+VKK+
Sbjct: 827 TVQNRFTKNLPSGEV-LCGVFTREYRHDALNCQVLITVPACFEILLLAPHRQNWVKKIRY 885
Query: 812 MILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
+I DE+H LG E G I E ++ +R F+ LS ++N L +WL
Sbjct: 886 VIFDEVHCLGGEIGAEIWEHLLVMIR---------CPFLALSATISNPEHLTEWL 931
Score = 138 (53.6 bits), Expect = 0.00010, P = 0.00010
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 62 RNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLAR--RYEDLEVFNNDTH 119
+ +++ E KK R Q+++ + VK +K +++ + Y D + DT
Sbjct: 1182 KQKIIDEKSQKKT----RNVDQSLIHEAEHDNLVKCLEKNLEIPQDCTYADQKAV--DTE 1235
Query: 120 PQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLA 179
+ + + + ++L L +G HH+ M ++ L E LF +G L+V+ T TLA
Sbjct: 1236 TLQKVFGRVKFERKGEELKALAERGIGYHHSAMSFKEKQLVEILFRKGYLRVVTATGTLA 1295
Query: 180 WGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGE 226
GVN+P +VV +Y A +R + GRAGR D G+
Sbjct: 1296 LGVNMPCKSVVFAQNSVY-LDALNYRQMS-----GRAGRRGQDLMGD 1336
Score = 134 (52.2 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 39/111 (35%), Positives = 55/111 (49%)
Query: 956 EDLQMVLSQVT----DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
E LQ V +V + L+ + GIG HH+ ++ K++ LVE LF ++V+ T TL
Sbjct: 1235 ETLQKVFGRVKFERKGEELKALAERGIGYHHSAMSFKEKQLVEILFRKGYLRVVTATGTL 1294
Query: 1012 AWGVNLPAHLVII-KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
A GVN+P V+ + + Y D R QM GRAGR D G
Sbjct: 1295 ALGVNMPCKSVVFAQNSVYLDALNYR----------QMSGRAGRRGQDLMG 1335
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 179 (68.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 921 LIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT--DQNLRQTLQF-- 976
++F SR++ A+ L + + + GM + + ++Q++ DQ L Q L
Sbjct: 377 IVFSFSRKECESYAISLKDMDFNKDHEK---GMVKSVYESAIAQLSPEDQKLPQILNILP 433
Query: 977 ----GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
GIG+HH+GL + +E LF ++VL T T + G+N+PA V+ +DG
Sbjct: 434 LLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDG 493
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV 1067
RY+ + +QM GRAGR D G +++V
Sbjct: 494 SDNRYITSG--EYIQMAGRAGRRGKDDRGTVILMV 526
Score = 163 (62.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 56/190 (29%), Positives = 89/190 (46%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIKKD 128
K++ S+ G +VF SRK+ A L +D + +E V + L +D
Sbjct: 363 KIIRSVASNDGLNCIVFSFSRKECESYAISLKDMDFNKDHEKGMVKSVYESAIAQLSPED 422
Query: 129 VMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHT 188
+ +++ L +GVHH+G++ + E LF EGL+KVL T T + G+N+PA T
Sbjct: 423 QKLPQILNILPLLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPART 482
Query: 189 VVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIIT----SHDKLAYYLRLL 243
VV + +D + G + + GRAGR D G I++ S D ++
Sbjct: 483 VVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQIIKGA 542
Query: 244 TSQLPIESQF 253
T P+ SQF
Sbjct: 543 TD--PLNSQF 550
Score = 121 (47.7 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 689 FNPIQTQIFH--ILYHTDNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLK 744
+ P Q F + DNN VL+ A T +GKT+ A A+ + +V+Y +P+K
Sbjct: 121 YYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQ--RVIYTSPIK 178
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHS 802
A+ ++ + ++ K++ MTGD T PD L+ I+ S +
Sbjct: 179 ALSNQKYRELEEEF-----KDVGLMTGDVTLNPDASCLVMTTEILR--------SMLYRG 225
Query: 803 RNYVKKVGLMILDEIHLL-GAERGPILEVIVSRM 835
+K+VG ++ DEIH + ERG + E + M
Sbjct: 226 SEIMKEVGWVVYDEIHYMRDKERGVVWEETIILM 259
Score = 58 (25.5 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 13 LSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
LSAT+PN + AQ++ + + + YRP PL Q +I
Sbjct: 268 LSATIPNARQFAQWVASIKQQPVNVVYTDYRPTPL-QHWI 306
Score = 41 (19.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 312 KQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEMLRRHM 369
KQR + T +AL K +E+ F ++G + + S + E+LR +
Sbjct: 168 KQRVIYTSPIKALSNQKYRELEEE---F--KDVGLMTGDVTLNPDASCLVMTTEILRSML 222
Query: 370 -NDSEVIEMVSHSSEFENIVVRDEEQNEL--ETLV 401
SE+++ V E +RD+E+ + ET++
Sbjct: 223 YRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETII 257
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 297 GIGWDEVIADPSLSLKQRAL 316
G+ W+E I S ++KQ L
Sbjct: 249 GVVWEETIILMSKNIKQAFL 268
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 186 (70.5 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQ--------N 969
+PV+IF S++ AL + + + + ++ M EE + ++D+ N
Sbjct: 385 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEN 441
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 442 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 501
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 502 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 539
Score = 176 (67.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 57/192 (29%), Positives = 93/192 (48%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 374 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 430
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + ++++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 431 DEDKKLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 490
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 491 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 549
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 550 LKGSADPLNSAF 561
Score = 106 (42.4 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 150 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 204
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 205 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 256
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 257 DSERGVVWE 265
Score = 70 (29.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 192 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 249
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 250 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 302
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 303 HVIYTDYRPTPLQHYI 318
Score = 60 (26.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 275 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 318
Score = 39 (18.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 176 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 230
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 231 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 269
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 175 (66.7 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 53/161 (32%), Positives = 85/161 (52%)
Query: 84 AMVFVHSRKDTVKTAQKL--VDL--ARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIE 139
A+VFV S+K + A L VD AR ++ +F + +L K+D + + E
Sbjct: 582 AVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLK--KEDRELPQILKIRE 639
Query: 140 LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP 199
+ G + VHH G+L + E LF++ L+KVL T T A G+NLP TV+ + +D
Sbjct: 640 MLGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVIFSSMRKHDG 699
Query: 200 KAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSHDKLA 237
++ +R+L G + GRAGR D++G I++ D L+
Sbjct: 700 RS--FRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYDDPLS 738
Score = 168 (64.2 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 55/184 (29%), Positives = 89/184 (48%)
Query: 919 PVLIFVSSRRQTRLTALDL--IQFAASDETPR--QFLG-----MPEEDLQMVLSQVTDQN 969
P ++FV S+++ A L + F + E F+ + +ED + L Q+
Sbjct: 581 PAVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKKEDRE--LPQIL--K 636
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+R+ L GI +HH GL + +E LFA + ++VL T T A G+NLP VI
Sbjct: 637 IREMLGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVIFSSMRK 696
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKS---FYKKFLYEPFPVE 1086
+DG++ R + P + QM GRAGR D+ G +++ ++ S F + L P +
Sbjct: 697 HDGRSFRNL-LP-GEFTQMSGRAGRRGLDKTGTVIVMAYDDPLSPTDFKEVVLGTPTKLS 754
Query: 1087 SSLR 1090
S R
Sbjct: 755 SQFR 758
Score = 153 (58.9 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 52/197 (26%), Positives = 98/197 (49%)
Query: 696 IFHILYHTDNNVLLGAPTGSGKTISAE--LAMLHLFNTQSDMKVVYIAPLKAIVRERMND 753
+FH+ ++V + A T +GKT+ AE +AM H T K +Y +P+KA+ ++ D
Sbjct: 298 VFHL--EQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMT----KCIYTSPIKALSNQKFRD 351
Query: 754 WKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMI 813
+K+ K+ +++ G T D+ A+ +I T E S + + ++ V +I
Sbjct: 352 FKETF-----KD-IDV-GLITGDVQINPEANCLIMTTEILR--SMLYRGADLIRDVEFVI 402
Query: 814 LDEIHLLG-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIG 871
DE+H + +RG + E ++ + V++I LS + N + A+W+G +
Sbjct: 403 FDEVHYVNDIDRGVVWEEVIIML-------PDHVKYILLSATVPNTFEFANWVGRTKQKD 455
Query: 872 LFNFKPSVRPVPLEVHI 888
++ RPVPLE+ +
Sbjct: 456 IYVISTPKRPVPLEIFV 472
Score = 67 (28.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAA--RNEL 65
++ + LSAT+PN E A ++ + ++ + RP+PL + ++ F N
Sbjct: 429 VKYILLSATVPNTFEFANWVGRTKQKDIYVISTPKRPVPL-EIFVSAKNQLFKVVDANRR 487
Query: 66 LSEICYKKVVDSLRQG 81
E ++K D L G
Sbjct: 488 FQENEFRKHKDLLEGG 503
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 497 LPAEILRKLEERGADLDR 514
+ EILR + RGADL R
Sbjct: 379 MTTEILRSMLYRGADLIR 396
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 57 PNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARR 107
PN A + K+ V L QG V H+ A+ + +A R
Sbjct: 280 PNMARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHR 330
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 495 KELPAEILRKLEERGADLDRLQEMEE-KDIGALIRYTPGGRLVKQYLGYFPSIQLSATVS 553
+EL + R+L +++ Q +E+ K A + P R + Y+ Y LS V
Sbjct: 978 EELAFKFTRQLSLHDLTVEKDQLLEKLKSSKAYV--CPNFR--QHYVEYLDRYLLSQEVE 1033
Query: 554 PITRTVLKIGLAITPEF 570
+ R + L + P++
Sbjct: 1034 KLERLISDENLELLPDY 1050
Score = 41 (19.5 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 650 HNLALPQARTSHTELLD---LKPLPVTALGNNIYEALYNFSHFN 690
H A +A + + +LD KP P N E L F + N
Sbjct: 204 HISAASEAALNKSTILDGDVSKPKPTVPFDNKEIEGLVPFDYSN 247
Score = 39 (18.8 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 252 QFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+ I L D++ + TV N E W+G T
Sbjct: 420 EVIIMLPDHVKYILLSATVPNTFEFANWVGRT 451
Score = 37 (18.1 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 1254 LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAM 1287
L +L+ ISD +L +Q +++++AM
Sbjct: 1027 LLSQEVEKLERLISDENLELLPDYEQRLQVLEAM 1060
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 170 (64.9 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQ-----F---LGMPEEDLQMVLSQVTDQNL 970
PV++F S+++ A+ + + + + + F + M +D L QV+ N+
Sbjct: 322 PVILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDD-DKKLPQVS--NI 378
Query: 971 RQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYY 1030
L+ GIG+HH+GL + ++E LF I+ L T T + G+N+PA V+ +
Sbjct: 379 LPILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKF 438
Query: 1031 DGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLR 1090
DG R++ + +QM GRAGR D+ G +++V E + K + + SL
Sbjct: 439 DGDKFRWLSSG--EYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSA--DSLN 494
Query: 1091 DQLHDHFN 1098
H +N
Sbjct: 495 SAFHLSYN 502
Score = 164 (62.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 79 RQGHQAMVFVHSRKDTVKTAQKLVDLARRYED-LEVFNNDTHPQLSLIKKDVMK-SRNKD 136
RQ ++F S+K+ A ++ + +D + + ++ D K + +
Sbjct: 318 RQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSN 377
Query: 137 LIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 196
++ + +GVHH+G+L + + E LF EGL+K L T T + G+N+PA TVV +
Sbjct: 378 ILPILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRK 437
Query: 197 YDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIII 230
+D W G + + GRAGR D+ G I++
Sbjct: 438 FDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILM 472
Score = 128 (50.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 43/154 (27%), Positives = 80/154 (51%)
Query: 704 DN--NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DN +V++ A T +GKT+ A A+ + + + +V+Y +P+KA+ ++ D+K+ S
Sbjct: 80 DNGESVMVSAHTSAGKTVVASYAIA--MSLKENQRVIYTSPIKALSNQKYRDFKEEF-SD 136
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+G MTGD T D +A ++ T E S + +++V +I DE+H +
Sbjct: 137 VGL----MTGDVTIDP----NASCLVMTTEILR--SMQYKGSEIMREVAWIIFDEVHYMR 186
Query: 821 GAERGPILE--VIV----SRMRYISSQTERAVRF 848
+ERG + E +++ SR ++S+ A F
Sbjct: 187 DSERGVVWEESIVMAPKNSRFVFLSATVPNAKEF 220
Score = 88 (36.0 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 769 MTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGPI 827
MTGD T D +A ++ T E S + +++V +I DE+H + +ERG +
Sbjct: 140 MTGDVTIDP----NASCLVMTTEILR--SMQYKGSEIMREVAWIIFDEVHYMRDSERGVV 193
Query: 828 LEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEV 886
E + + RF+ LS + NA + ADW+ V + RP PL+
Sbjct: 194 WEESIV-------MAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQH 246
Query: 887 HI 888
++
Sbjct: 247 YV 248
Score = 65 (27.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 9 RIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
R V LSAT+PN E A ++ + + YRP PL Q Y+
Sbjct: 206 RFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPL-QHYV 248
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 177 (67.4 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 50/160 (31%), Positives = 84/160 (52%)
Query: 919 PVLIFVSSRRQTRLTALDL--IQFAASDETP---RQFLG----MPEEDLQMVLSQVTDQN 969
PV++F S+R AL + + F + DE + F +PE D + L Q+ ++
Sbjct: 408 PVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRE--LPQI--KH 463
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ L+ GIG+HH+GL + ++E LF ++VL T T + G+N+PA V+
Sbjct: 464 ILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRK 523
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DG+ R+V + +QM GRAGR D G ++++ E
Sbjct: 524 WDGQQFRWVSGG--EYIQMSGRAGRRGLDDRGIVIMMIDE 561
Score = 175 (66.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 56/185 (30%), Positives = 96/185 (51%)
Query: 60 AARNELLSEICYKKVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYED-----LE 112
+A+ + +I YK +V + ++ + +VF S++D + A K+ L +D +
Sbjct: 385 SAKGDAKGDI-YK-IVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTK 442
Query: 113 VFNNDTHPQLSLIKK-DVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKV 171
+FNN ++L+ + D + K ++ L +G+HH+G+L + + E LF EG LKV
Sbjct: 443 IFNN----AIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKV 498
Query: 172 LVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIII 230
L T T + G+N+PA TVV + +D + W G + + GRAGR D GI+I
Sbjct: 499 LFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLD--DRGIVI 556
Query: 231 TSHDK 235
D+
Sbjct: 557 MMIDE 561
Score = 119 (46.9 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 46/174 (26%), Positives = 88/174 (50%)
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
Y F+ +P Q + ++ VL+ A T +GKT+ AE A+ + ++ +V+Y +P+
Sbjct: 146 YPFT-LDPFQDTAISCIDRGES-VLVSAHTSAGKTVVAEYAIAQ--SLKNKQRVIYTSPI 201
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWH 801
KA+ ++ + L+++ G ++ MTGD T PD L+ I+ S +
Sbjct: 202 KALSNQKYRE----LLAEFG-DVGLMTGDITINPDAGCLVMTTEILR--------SMLYR 248
Query: 802 SRNYVKKVGLMILDEIHLL-GAERGPILE--VIV--SRMRYI--SSQTERAVRF 848
+++V +I DE+H + ERG + E +I+ ++RY+ S+ A+ F
Sbjct: 249 GSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEF 302
Score = 75 (31.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 758 LVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILD 815
L+++ G ++ MTGD T PD L+ I+ S + +++V +I D
Sbjct: 212 LLAEFG-DVGLMTGDITINPDAGCLVMTTEILR--------SMLYRGSEVMREVAWVIFD 262
Query: 816 EIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGLF 873
E+H + ERG + E + + VR++ LS + NA + A+W+ +
Sbjct: 263 EVHYMRDKERGVVWEETIILL-------PDKVRYVFLSATIPNAMEFAEWICKIHSQPCH 315
Query: 874 NFKPSVRPVPLEVHI 888
+ RP PL+ ++
Sbjct: 316 IVYTNFRPTPLQHYL 330
Score = 68 (29.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 8 IRIVGLSATLPNYLEVAQFL-RVNPEMGLFFFDSSYRPIPLAQQYI 52
+R V LSAT+PN +E A+++ +++ + + +++RP PL Q Y+
Sbjct: 287 VRYVFLSATIPNAMEFAEWICKIHSQPCHIVY-TNFRPTPL-QHYL 330
Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS---VETYNEM 364
SL KQR + T +AL K + E F ++G + I + V T E+
Sbjct: 188 SLKNKQRVIYTSPIKALSNQK---YRELLAEF--GDVGLMTGDITINPDAGCLVMT-TEI 241
Query: 365 LRRHM-NDSEVIEMVSHSSEFENIVVRDEEQNEL--ETLVQTLCPVEVK 410
LR + SEV+ V+ E +RD+E+ + ET++ L P +V+
Sbjct: 242 LRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETII--LLPDKVR 288
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 193 (73.0 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 59/221 (26%), Positives = 105/221 (47%)
Query: 887 HIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDET 946
HI Y K R + + +C P++IF S+++ + A + + + +T
Sbjct: 480 HINKYTKKM---RKTTYDIEKIVQMCHSRNYTPLIIFAFSKKECEVNATAMHKIDLTSDT 536
Query: 947 PRQFLGMPEEDLQMVLSQVTDQNLRQTLQF-------GIGLHHAGLNDKDRSLVEELFAN 999
++ + E+ +L+ D++L Q +QF GIG+HH GL + ++E +F
Sbjct: 537 EKEVIKELYENAIRILAD-DDRSLPQ-VQFILPLLLRGIGIHHGGLLPIIKEIIEIMFQE 594
Query: 1000 NKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQ 1059
+ ++VL T T + G+N+PA V+ +DG KR + + +QM GRAGR D
Sbjct: 595 SLLKVLFSTETFSMGINMPAKTVVFTSLTKFDGLEKRLITSG--EYIQMAGRAGRRGLDD 652
Query: 1060 HGKAVILVHEPK--KSFYKKFLYEPFPVESSLRDQLHDHFN 1098
G +I++ P + +K F+ E + L Q H +N
Sbjct: 653 RGIVIIMLDTPLHWREAHKLFVGEA----NRLVSQFHLGYN 689
Score = 118 (46.6 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 48/165 (29%), Positives = 77/165 (46%)
Query: 671 PVTALGNNIYEAL-----YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAM 725
P + + N I E L Y F + Q + L ++ VL+ A T +GKT+ AE A+
Sbjct: 233 PQSYVHNEIKEPLIPARTYKFE-LDTFQKKSIECLERNES-VLVSAHTSAGKTVIAEYAI 290
Query: 726 LHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADI 785
+ +V+Y +P+KA+ ++ D LG+E ++ G T D+ A I
Sbjct: 291 A--LGLRDKQRVIYTSPIKALSNQKYRD--------LGEEFKDV-GLITGDISINPEASI 339
Query: 786 IISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGPILE 829
I+ T E S + + K+V +I DEIH + +RG I E
Sbjct: 340 IVMTTEILR--SMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWE 382
Score = 90 (36.7 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
LG+E ++ G T D+ A II+ T E S + + K+V +I DEIH +
Sbjct: 317 LGEEFKDV-GLITGDISINPEASIIVMTTEILR--SMLYRGSSLTKEVKWVIFDEIHYMR 373
Query: 821 GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSV 879
+RG I E + + + VRFI LS + N A+W+ +
Sbjct: 374 DRDRGVIWEETIILLPLM-------VRFIFLSATIPNGIQFAEWVSSIKSQACHIVYTDY 426
Query: 880 RPVPLEVHIQGYP 892
RP PL+ +I YP
Sbjct: 427 RPTPLQHYI--YP 437
Score = 41 (19.5 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 303 VIADPSLSL----KQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYI--QYS 356
VIA+ +++L KQR + T +AL K E+ F ++G I I + S
Sbjct: 284 VIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLGEE---F--KDVGLITGDISINPEAS 338
Query: 357 SVETYNEMLRRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLVQTLCPVEVK 410
+ E+LR + S + + V F+ I +RD ++ + ET++ L P+ V+
Sbjct: 339 IIVMTTEILRSMLYRGSSLTKEVKWVI-FDEIHYMRDRDRGVIWEETII--LLPLMVR 393
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 1371 LQRFPRIQVKLRLQR----RDIDG-ENSLTLNIRMDKMNSWKN 1408
L+ I+V L+ +DI ENS+T +I+ +++ + KN
Sbjct: 1121 LESLNYIEVSYNLENLKNEKDIKTIENSITEHIKNERIMNIKN 1163
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 188 (71.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 385 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFNNAIDCLSDEDKKLPQVEH 441
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 442 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 501
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
YDGK R++ + +QM GRAGR D G +++V E
Sbjct: 502 YDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 539
Score = 183 (69.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 59/192 (30%), Positives = 92/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVFNN L
Sbjct: 374 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAID---CLS 430
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 431 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 490
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + YD K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 491 ARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 549
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 550 LKGSADPLNSAF 561
Score = 106 (42.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 150 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 204
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 205 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 256
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 257 DSERGVVWE 265
Score = 70 (29.7 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 192 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 249
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 250 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 302
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 303 HVIYTDYRPTPLQHYI 318
Score = 60 (26.2 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 275 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 318
Score = 39 (18.8 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 599 VVEKVKNSEEQYNKIVIPNEE 619
Score = 39 (18.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 176 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 230
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 231 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 269
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 186 (70.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQ--------N 969
+PV+IF S++ AL + + + + ++ M EE + ++D+ N
Sbjct: 385 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEN 441
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 442 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 501
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 502 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 539
Score = 176 (67.0 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 57/192 (29%), Positives = 93/192 (48%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 374 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 430
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + ++++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 431 DEDKKLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 490
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 491 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 549
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 550 LKGSADPLNSAF 561
Score = 106 (42.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 150 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 204
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 205 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 256
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 257 DSERGVVWE 265
Score = 70 (29.7 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 192 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 249
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 250 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 302
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 303 HVIYTDYRPTPLQHYI 318
Score = 60 (26.2 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 275 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 318
Score = 41 (19.5 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 755 KDRLVSQLG----KEMVEMTGDYTPDLMALLSADIIISTPEKWDGI 796
+ R++ +LG +++EM G ++ SAD ++ T ++G+
Sbjct: 852 RKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGL 897
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 176 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 230
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 231 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 269
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 599 VVEKVKNSEEQYNKIVIPNEE 619
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 184 (69.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 286 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEH 342
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 343 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 402
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 403 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 440
Score = 174 (66.3 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 57/192 (29%), Positives = 92/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 275 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 331
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 332 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 391
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 392 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 450
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 451 LKGSADPLNSAF 462
Score = 106 (42.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 51 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 105
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 106 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 157
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 158 DSERGVVWE 166
Score = 70 (29.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 93 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 150
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 151 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 203
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 204 HVIYTDYRPTPLQHYI 219
Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 176 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 219
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 500 VVEKVKNSEEQYNKIVIPNEE 520
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 77 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 131
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 132 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 170
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 184 (69.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 387 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEH 443
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 444 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 503
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 504 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 541
Score = 174 (66.3 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 57/192 (29%), Positives = 92/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 376 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 432
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 433 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 492
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 493 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 551
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 552 LKGSADPLNSAF 563
Score = 107 (42.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 650 HNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNN--V 707
H +ALP + + L LKP +G E Y F + Q + + DNN V
Sbjct: 112 HEVALP----AEEDYLPLKP----RVGKAAKE--YPFI-LDAFQREAIQCV---DNNQSV 157
Query: 708 LLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMV 767
L+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + + +++
Sbjct: 158 LVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF-----QDVG 210
Query: 768 EMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGP 826
MTGD T + +A ++ T E S + +++V +I DEIH + +ERG
Sbjct: 211 LMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMRDSERGV 264
Query: 827 ILE 829
+ E
Sbjct: 265 VWE 267
Score = 70 (29.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 194 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 251
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 252 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 304
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 305 HVIYTDYRPTPLQHYI 320
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 277 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 320
Score = 39 (18.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 601 VVEKVKNSEEQYNKIVIPNEE 621
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 178 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 232
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 233 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 271
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 179 (68.1 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 47/157 (29%), Positives = 81/157 (51%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQ-----NLRQ 972
+PV+IF S+++ AL + + +++ + + + LS+ Q N+
Sbjct: 460 QPVIIFSFSKKECETYALQMSKLDFNNDDEKNAVETIFNNAIDSLSESDKQLPAVINILP 519
Query: 973 TLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GIG+HHAGL + ++E LF I+ L T T + G+N+PA VI +DG
Sbjct: 520 LLKRGIGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLNMPAKTVIFTSVRKFDG 579
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+ R++ + +QM GRAGR D+ G +++V E
Sbjct: 580 EGMRWISGG--EYIQMSGRAGRRGLDERGIVILMVDE 614
Score = 172 (65.6 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 52/173 (30%), Positives = 85/173 (49%)
Query: 70 CYKKVVDSLRQGHQ-AMVFVHSRKDTVKTAQKLVDLARRYED----LE-VFNNDTHPQLS 123
CYK V + + +Q ++F S+K+ A ++ L +D +E +FNN S
Sbjct: 447 CYKIVKMIMERNYQPVIIFSFSKKECETYALQMSKLDFNNDDEKNAVETIFNNAID---S 503
Query: 124 LIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVN 183
L + D +++ L +G+HHAG+L + + E LF G +K L T T + G+N
Sbjct: 504 LSESDKQLPAVINILPLLKRGIGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLN 563
Query: 184 LPAHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
+PA TV+ + +D + W G + + GRAGR D GI+I D+
Sbjct: 564 MPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAGRRGLDE--RGIVILMVDE 614
Score = 112 (44.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 646 CISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQ-TQIFHILYHTD 704
CI H + LP + L P P+ Y F +P Q T I I +
Sbjct: 178 CI--HEVLLPPGEVNDDPNLYNPPEPIKPART------YPFK-LDPFQATSIACI--ERN 226
Query: 705 NNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
+VL+ A T +GKT+ AE ++ + +V+Y +P+KA+ ++ D ++ +
Sbjct: 227 ESVLVSAHTSAGKTVVAEYSIATAL--RDGQRVIYTSPIKALSNQKFRDLQETF-----Q 279
Query: 765 EMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAE 823
++ MTGD T + +A ++ T E S + +++V +I DEIH L E
Sbjct: 280 DVGLMTGDITINA----NASCLVMTTEILR--SMLYRGSETMREVSWVIFDEIHYLRDKE 333
Query: 824 RGPILE 829
RG + E
Sbjct: 334 RGVVWE 339
Score = 84 (34.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 35/140 (25%), Positives = 66/140 (47%)
Query: 751 MNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVG 810
+++ K R + + +++ MTGD T + +A ++ T E S + +++V
Sbjct: 266 LSNQKFRDLQETFQDVGLMTGDITINA----NASCLVMTTEILR--SMLYRGSETMREVS 319
Query: 811 LMILDEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VG 868
+I DEIH L ERG + E + + +V+F+ LS + NA + A W+ +
Sbjct: 320 WVIFDEIHYLRDKERGVVWEETIILL-------PDSVKFVFLSATIPNAREFAAWIAKIH 372
Query: 869 EIGLFNFKPSVRPVPLEVHI 888
+ RP+PL+ +I
Sbjct: 373 KQPCHVVYTEYRPIPLQHYI 392
Score = 70 (29.7 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
++ V LSAT+PN E A ++ + + YRPIPL Q YI
Sbjct: 349 VKFVFLSATIPNAREFAAWIAKIHKQPCHVVYTEYRPIPL-QHYI 392
Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 718 TISAELAMLHLFNTQSDMKVVYIAP-LKA--IVR--ERMNDWKDRLVSQLGKEMVEMTGD 772
+I A+LA L + Y+ P L A IVR E DW ++ K ++ +G
Sbjct: 701 SIKAQLAKLREAMRDFINQPTYVQPFLTAGRIVRIREGSTDWGYGVILNFSKRPIKSSGS 760
Query: 773 YTPDLMALLSADIII 787
D + ADI++
Sbjct: 761 GVSDKSFEVIADILL 775
Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 238 YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWL 280
+YLR + E I L D++ T+ N +E AW+
Sbjct: 327 HYLRDKERGVVWEETIIL-LPDSVKFVFLSATIPNAREFAAWI 368
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 184 (69.8 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 387 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEH 443
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 444 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 503
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 504 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 541
Score = 174 (66.3 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 57/192 (29%), Positives = 92/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 376 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 432
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 433 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 492
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 493 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 551
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 552 LKGSADPLNSAF 563
Score = 106 (42.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 152 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 206
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 207 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 258
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 259 DSERGVVWE 267
Score = 70 (29.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 194 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 251
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 252 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 304
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 305 HVIYTDYRPTPLQHYI 320
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 277 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 320
Score = 39 (18.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 601 VVEKVKNSEEQYNKIVIPNEE 621
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 178 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 232
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 233 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 271
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 184 (69.8 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 388 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFSNAIDCLSDEDKKLPQVEH 444
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 445 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 504
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 505 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 542
Score = 174 (66.3 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 57/192 (29%), Positives = 92/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVF+N L
Sbjct: 377 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAID---CLS 433
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 434 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 493
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ + +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 494 ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 552
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 553 LKGSADPLNSAF 564
Score = 106 (42.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 704 DNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQ 761
DNN VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 153 DNNQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF--- 207
Query: 762 LGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL- 820
+++ MTGD T + +A ++ T E S + +++V +I DEIH +
Sbjct: 208 --QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMR 259
Query: 821 GAERGPILE 829
+ERG + E
Sbjct: 260 DSERGVVWE 268
Score = 70 (29.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 195 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 252
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 253 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 305
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 306 HVIYTDYRPTPLQHYI 321
Score = 60 (26.2 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 278 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 321
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 16/97 (16%), Positives = 41/97 (42%)
Query: 755 KDRLVSQLG----KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVG 810
+ R++ +LG +++EM G ++ SAD ++ T ++G+ + + +
Sbjct: 855 RKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGLFNDLSAEQATALLS 914
Query: 811 LMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVR 847
+ E +E + E + +R + +R +
Sbjct: 915 CFVFQEN---SSEMPKLTEQLAGPLRQMQECAKRIAK 948
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 179 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 233
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 234 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 272
Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 374 VIEMVSHSSE-FENIVVRDEE 393
V+E V +S E + IV+ +EE
Sbjct: 602 VVEKVKNSEEQYNKIVIPNEE 622
>UNIPROTKB|I3LVA7 [details] [associations]
symbol:I3LVA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026 EMBL:CU468078
Ensembl:ENSSSCT00000024341 Uniprot:I3LVA7
Length = 119
Score = 207 (77.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 1 VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPN 58
VESTQ MIRI+GLSATLPNYL+VA FL VNP +GLF+FD +RP+PL Q ++G+ N
Sbjct: 56 VESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSAN 113
Score = 199 (75.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 47/103 (45%), Positives = 67/103 (65%)
Query: 785 IIISTPEKWDGISRNWHSRNYVKK-VGLMILDEIHLLGAERGPILEVIVSR-MRYISSQT 842
++++TPEKWD ++R + + V L+ILDE+HLL +RGP+LE IV+R +R + S T
Sbjct: 1 MLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVES-T 59
Query: 843 ERAVRFIGLSTALANAGDLADWLGVGE-IGLFNFKPSVRPVPL 884
+ +R +GLS L N D+A +L V IGLF F RPVPL
Sbjct: 60 QSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPL 102
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 188 (71.2 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 387 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFNNAIDCLSDEDKKLPQVEH 443
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 444 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 503
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
YDGK R++ + +QM GRAGR D G +++V E
Sbjct: 504 YDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 541
Score = 182 (69.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 55/171 (32%), Positives = 82/171 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVFNN L
Sbjct: 376 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAID---CLS 432
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 433 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 492
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
A TV+ + YD K W G + + GRAGR D GI+I D+
Sbjct: 493 ARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMD--DRGIVILMVDE 541
Score = 101 (40.6 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 704 DNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLG 763
+ +VL+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + +
Sbjct: 154 NQSVLVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF----- 206
Query: 764 KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GA 822
+++ MTGD T + +A ++ T E S + +++V +I DEIH + +
Sbjct: 207 QDVGLMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMRDS 260
Query: 823 ERGPILE 829
ERG + E
Sbjct: 261 ERGVVWE 267
Score = 70 (29.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 194 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 251
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V ++ LS + NA A+W+ + +
Sbjct: 252 DEIHYMRDSERGVVWEETIILL-------PDNVHYVFLSATIPNARQFAEWICHLHKQPC 304
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 305 HVIYTDYRPTPLQHYI 320
Score = 60 (26.2 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 277 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 320
Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 178 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 232
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 233 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 271
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 182 (69.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 52/146 (35%), Positives = 73/146 (50%)
Query: 112 EVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKV 171
EVFNN T L +D + + ++ L +G+HH G+L + E LFSEGLLK
Sbjct: 415 EVFNNATD---CLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKA 471
Query: 172 LVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIII 230
L T T A G+N+PA TV+ + +D K W G + + GRAGR D G +I
Sbjct: 472 LFATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGI-VIF 530
Query: 231 TSHDKL--AYYLRLLTSQL-PIESQF 253
+K+ A +LL P+ S F
Sbjct: 531 MVDEKMSPAVGKQLLKGSADPLNSAF 556
Score = 181 (68.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 918 KPVLIFVSSRRQTRLTALDL--IQFAASDE---TPRQFLGMPE--EDLQMVLSQVTDQNL 970
+PV+IF S+++ AL + + F +E F + D L QV +++
Sbjct: 380 QPVIIFSFSKKECEAYALQVSKLDFNTDEEKKLVEEVFNNATDCLSDEDKKLPQV--EHV 437
Query: 971 RQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYY 1030
L+ GIG+HH GL + +E LF+ ++ L T T A G+N+PA V+ +
Sbjct: 438 LPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKF 497
Query: 1031 DGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
DGK R++ + +QM GRAGR D+ G + +V E
Sbjct: 498 DGKDFRWISSG--EYIQMSGRAGRRGMDERGIVIFMVDE 534
Score = 108 (43.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 650 HNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNN--V 707
H + LP ++ E LKP +G E Y F +P Q + + DNN V
Sbjct: 100 HEVVLP----ANEEYTPLKP----RVGKAAKE--YPFI-LDPFQREAILCI---DNNQSV 145
Query: 708 LLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMV 767
L+ A T +GKT+ AE A+ + +V++ +P+KA+ ++ + + +++
Sbjct: 146 LVSAHTSAGKTVCAEYAIA--LALREKQRVIFTSPIKALSNQKYREMYEEF-----QDVG 198
Query: 768 EMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERGP 826
MTGD T + +A ++ T E S + +++V +I DEIH + +ERG
Sbjct: 199 LMTGDVTINP----TASCLVMTTEILR--SMLYRGSEVMREVAWVIFDEIHYMRDSERGV 252
Query: 827 ILE 829
+ E
Sbjct: 253 VWE 255
Score = 64 (27.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 34/136 (25%), Positives = 58/136 (42%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +EM E D T D+ +A ++ T E S + +++V +I
Sbjct: 182 LSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILR--SMLYRGSEVMREVAWVIF 239
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGL 872
DEIH + +ERG + E + + V + LS + NA A+W+ + +
Sbjct: 240 DEIHYMRDSERGVVWEETIILL-------PDNVHHVFLSATVPNARQFAEWICHLHKQPC 292
Query: 873 FNFKPSVRPVPLEVHI 888
RP PL+ +I
Sbjct: 293 HVVYTDYRPTPLQHYI 308
Score = 56 (24.8 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 11 VGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 268 VFLSATVPNARQFAEWICHLHKQPCHVVYTDYRPTPL-QHYI 308
Score = 42 (19.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 23/110 (20%), Positives = 39/110 (35%)
Query: 544 PSIQLSATVSPITRTVLKIGLAITPEFTW----KDHFHGAAQRW--W---IIVQDSESDH 594
P+ + I R++L G + E W + H+ ++R W II+ H
Sbjct: 208 PTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHH 267
Query: 595 IYHSELFTLTKRMARG----ETQKLSFTVPIFEPHPPQYYIRAVSDSWLH 640
++ S ++ A Q + P P Q+YI LH
Sbjct: 268 VFLSATVPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLH 317
Score = 39 (18.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 166 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 220
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNEL--ETLV 401
R + SEV+ V+ F+ I +RD E+ + ET++
Sbjct: 221 RSMLYRGSEVMREVAWVI-FDEIHYMRDSERGVVWEETII 259
Score = 37 (18.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWL 280
L DN++ TV N ++ W+
Sbjct: 261 LPDNVHHVFLSATVPNARQFAEWI 284
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 182 (69.1 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 568 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 623
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 624 MSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 683
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 684 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 741
Query: 1087 SSLR 1090
S R
Sbjct: 742 SQFR 745
Score = 169 (64.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 554 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 613
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 614 SDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 673
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 674 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 731
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 732 MMMGKPSQLQSQF 744
Score = 107 (42.7 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 46/173 (26%), Positives = 84/173 (48%)
Query: 669 PLPVTALGNNIYEAL----YNFSHFNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISA 721
P+ VT+ + Y + + +S F P Q Q I H+ H ++V + A T +GKT+ A
Sbjct: 286 PVDVTSPVGDFYRLIPQPAFQWS-FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVA 342
Query: 722 ELAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMAL 780
E A+ Q M + +Y +P+KA+ ++ D+++ +G +TGD +
Sbjct: 343 EYAIAL---AQKHMTRTIYTSPIKALSNQKFRDFRNTF-GDVGL----LTGD----VQLH 390
Query: 781 LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIV 832
A +I T E S + + ++ + +I DE+H + AERG + E ++
Sbjct: 391 PEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVL 441
Score = 88 (36.0 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + AERG + E
Sbjct: 381 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWE 438
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 439 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHY 490
Query: 888 I 888
+
Sbjct: 491 L 491
Score = 66 (28.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 448 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPL-EHYL 491
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTA-LDLIQFAASDETPRQFLGMPE 955
R + + + A C HSP +V R + ++ ++ ++F SD++ L +PE
Sbjct: 1001 RARKLEELIWGAQCVHSPRFSAQ-YVKLRERMQIQKEMERLRFLLSDQS---LLLLPE 1054
Score = 38 (18.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 444 LPDHVSIILLSATVPNALEFADWIG 468
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 155 (59.6 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 971 RQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYY 1030
R+ L G+ HHAG+ R VEELF ++ + T TLA G+N+PA V+++ +
Sbjct: 333 REGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKF 392
Query: 1031 DGKTKRYVDFPIT--DILQMMGRAGRPQYDQHGKAVILVH 1068
+G+ P+T + Q+ GRAGR D G AV++ H
Sbjct: 393 NGEQH----MPLTPGEYTQLTGRAGRRGIDVEGHAVVIWH 428
Score = 149 (57.5 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 45/133 (33%), Positives = 68/133 (51%)
Query: 140 LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP 199
L GLA HHAGML + R E LF+ GL+K + T TLA G+N+PA TVV++ ++
Sbjct: 337 LRGLAA--HHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNG 394
Query: 200 KAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKL--AYYLRLLTSQ-LPIESQFIS 255
+ G + GRAGR D G ++I H ++ + L +++ P+ S F
Sbjct: 395 EQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIW-HPEIEPSEVAGLASTRTFPLRSSFAP 453
Query: 256 SLKDNLNAEVALG 268
S +N +G
Sbjct: 454 SYNMTINLVHRMG 466
Score = 131 (51.2 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 41/134 (30%), Positives = 70/134 (52%)
Query: 705 NNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
+ VL+ APTG+GKT+ E A+ HL + K Y PLKA+ ++ D L ++ G+
Sbjct: 33 HGVLVCAPTGAGKTVVGEFAV-HLA-LAAGSKCFYTTPLKALSNQKHTD----LTARYGR 86
Query: 765 EMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGL--MILDEIHLLGA 822
+ + G T DL +A +++ T E + RN + GL +++DE+H L
Sbjct: 87 DQI---GLLTGDLSVNGNAPVVVMTTE----VLRNMLYADSPALQGLSYVVMDEVHFLAD 139
Query: 823 E-RGPILEVIVSRM 835
RGP+ E ++ ++
Sbjct: 140 RMRGPVWEEVILQL 153
Score = 113 (44.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 736 KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDG 795
K Y PLKA+ ++ D L ++ G++ + G T DL +A +++ T E
Sbjct: 62 KCFYTTPLKALSNQKHTD----LTARYGRDQI---GLLTGDLSVNGNAPVVVMTTE---- 110
Query: 796 ISRNWHSRNYVKKVGL--MILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLS 852
+ RN + GL +++DE+H L RGP+ E ++ Q VR + LS
Sbjct: 111 VLRNMLYADSPALQGLSYVVMDEVHFLADRMRGPVWEEVIL-------QLPDDVRVVSLS 163
Query: 853 TALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHI 888
++NA + W+ RPVPL H+
Sbjct: 164 ATVSNAEEFGGWIQTVRGDTTVVVDEHRPVPLWQHV 199
Score = 51 (23.0 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+R+V LSAT+ N E +++ D +RP+PL Q +
Sbjct: 157 VRVVSLSATVSNAEEFGGWIQTVRGDTTVVVDE-HRPVPLWQHVL 200
Score = 48 (22.0 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 21/98 (21%), Positives = 38/98 (38%)
Query: 989 DRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLV-IIKGTEYY----DGKTKRY-VDFPI 1042
D L+ +++ + + V C T AW PA L ++ Y DG+ + D P
Sbjct: 733 DGRLLARIYSESDLLVAECLRTGAWEGLKPAELAGVVSAVVYETRGGDGQGAPFGADVPT 792
Query: 1043 TDILQMMGRAGRP----QYDQHGKAVILVHEPKKSFYK 1076
+ Q + + R + D+ + EP F +
Sbjct: 793 PRLRQALTQTSRLSTTLRADEQAHRITPSREPDDGFVR 830
Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 248 PIESQFISSLKDNLNAEVALGTVTNVKEACAWL 280
P+ + I L D++ TV+N +E W+
Sbjct: 144 PVWEEVILQLPDDVRVVSLSATVSNAEEFGGWI 176
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 181 (68.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 62/183 (33%), Positives = 86/183 (46%)
Query: 85 MVFVHSRKDTVKTAQKLV--DLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFG 142
+VFV S+K + L DL E EV L K+D + + + E+
Sbjct: 554 IVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARLKKEDRLLPQIGRMREMLS 613
Query: 143 LAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAG 202
+ VHH G+L + + E LF GL+KVL T T A GVN+PA +VV GTQ +D +
Sbjct: 614 RGLAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGR-- 671
Query: 203 GWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKD 259
+RDL G GRAGR D +G +II S +L L + S+ IS +
Sbjct: 672 NFRDLLPGEYTQCSGRAGRRGLDVTGT-VIILSRSELPDTASLRHMIMGPSSKLISQFRL 730
Query: 260 NLN 262
N
Sbjct: 731 TYN 733
Score = 176 (67.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 52/157 (33%), Positives = 77/157 (49%)
Query: 919 PVLIFVSSRRQTR-----LTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++FV S+++ LT DL E + + +ED +L Q+
Sbjct: 552 PVIVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARLKKED--RLLPQIG--R 607
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+R+ L G+ +HH GL + +VE LF ++VL T T A GVN+PA V+ GT+
Sbjct: 608 MREMLSRGLAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQK 667
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVIL 1066
+DG+ R D + Q GRAGR D G +IL
Sbjct: 668 HDGRNFR--DLLPGEYTQCSGRAGRRGLDVTGTVIIL 702
Score = 110 (43.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 37/139 (26%), Positives = 69/139 (49%)
Query: 700 LYHTD--NNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKD 756
+YH + ++V + A T +GKT+ AE A+ Q M K +Y +P+KA+ ++ D+K
Sbjct: 289 IYHLEMGDSVFVAAHTSAGKTVVAEYAIAL---AQKHMTKAIYTSPIKALSNQKFRDFKH 345
Query: 757 RLVSQLGKEMVEMTGDY--TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
+ +++ +TGD P+ LL I+ S + + ++ V +I
Sbjct: 346 KF-----EDVGILTGDVQVNPEGSCLLMTTEILR--------SMLYRGADLIRDVEFVIF 392
Query: 815 DEIHLLG-AERGPILEVIV 832
DE+H + ERG + E ++
Sbjct: 393 DEVHYVNDLERGVVWEEVI 411
Score = 81 (33.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 764 KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-A 822
K E G T D+ ++ T E S + + ++ V +I DE+H +
Sbjct: 344 KHKFEDVGILTGDVQVNPEGSCLLMTTEILR--SMLYRGADLIRDVEFVIFDEVHYVNDL 401
Query: 823 ERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRP 881
ERG + E ++ + V I LS + N + A W+G + ++ RP
Sbjct: 402 ERGVVWEEVIIML-------PPHVTLILLSATVPNTKEFASWVGRTKKKNIYVISTLKRP 454
Query: 882 VPLEVHI 888
VPLE ++
Sbjct: 455 VPLEHYL 461
Score = 70 (29.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 19/82 (23%), Positives = 43/82 (52%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNE--- 64
+ ++ LSAT+PN E A ++ + ++ + RP+PL + Y+ + + F ++
Sbjct: 418 VTLILLSATVPNTKEFASWVGRTKKKNIYVISTLKRPVPL-EHYLWVKQNMFKIVDQHGR 476
Query: 65 LLSEICYKKVVDSLRQGHQAMV 86
L + YK D+L++ + ++
Sbjct: 477 FLMD-GYKSANDALKKPDKPVI 497
Score = 59 (25.8 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 23 VAQFLRVNPEMGLFF-FD-SSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQ 80
+ F ++ PEM L F F+ +++ + +G S F A + + + +L Q
Sbjct: 263 IENFQQLVPEMALDFPFELDNFQKEAIYHLEMGDSV--FVAAHTSAGKTVVAEYAIALAQ 320
Query: 81 GHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDT--HPQLS--LIKKDVMKS---R 133
H +++ + QK D ++ED+ + D +P+ S L+ ++++S R
Sbjct: 321 KHMTKA-IYTSPIKALSNQKFRDFKHKFEDVGILTGDVQVNPEGSCLLMTTEILRSMLYR 379
Query: 134 NKDLIE--LFGLAVGVHHAGMLRSDRGL 159
DLI F + VH+ L +RG+
Sbjct: 380 GADLIRDVEFVIFDEVHYVNDL--ERGV 405
Score = 44 (20.5 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 269 TVTNVKEACAWLGYT 283
TV N KE +W+G T
Sbjct: 426 TVPNTKEFASWVGRT 440
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 497 LPAEILRKLEERGADLDR 514
+ EILR + RGADL R
Sbjct: 368 MTTEILRSMLYRGADLIR 385
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 790 PEKWDGISRNWHSRNYV 806
PEKWD +RN+V
Sbjct: 192 PEKWDTKKVKSSNRNFV 208
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 291 LNPLAYGIGWDEVI 304
+N L G+ W+EVI
Sbjct: 398 VNDLERGVVWEEVI 411
>UNIPROTKB|E1C287 [details] [associations]
symbol:E1C287 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00550000074822 EMBL:AADN02012856
IPI:IPI00587427 Ensembl:ENSGALT00000009827 OMA:HAVKDES
Uniprot:E1C287
Length = 177
Score = 201 (75.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 51/158 (32%), Positives = 82/158 (51%)
Query: 791 EKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRYISSQTERA---- 845
EKWD ++R W + V+ V L ++DE+H++ E RG LEV+VSRM+ + S R
Sbjct: 2 EKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENH 61
Query: 846 ----VRFIGLSTALANAGDLADWLGVGEIGLFNFK--PSVRPVPLEVHIQGYPGKFYCPR 899
+RF+ +S + NA D+A+WL G++ K RPV L + G+P
Sbjct: 62 DVPPLRFVAVSATIPNAEDIAEWLSDGKMPAVCLKVDEDQRPVKLRKIVLGFPCSDSQTE 121
Query: 900 MN---SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTA 934
++N + I +S KPVL+F ++R+ + A
Sbjct: 122 FKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAA 159
>UNIPROTKB|F1P0I1 [details] [associations]
symbol:F1P0I1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:QDCTYAD GeneTree:ENSGT00690000102154 EMBL:AADN02016399
IPI:IPI00595626 Ensembl:ENSGALT00000015699 Uniprot:F1P0I1
Length = 1313
Score = 171 (65.3 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 53/184 (28%), Positives = 90/184 (48%)
Query: 688 HFNPIQTQIFHILYHTDNN--VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKA 745
HF P T +L DNN ++ APT SGKT ++ M + + VVY+AP KA
Sbjct: 740 HFIP-DTWQRELLDAVDNNESAVIVAPTSSGKTYASYYCMEKVLKMSDEGVVVYVAPTKA 798
Query: 746 IVRERMNDWKDRLVSQLGKEMVE---MTGDYTPDLMALLSADIIISTPEKWDGISRNWHS 802
+V + + R +L +V T DY D+M ++ I+++ P+ + + +
Sbjct: 799 LVNQVVGSVYSRFTKKLPDGLVVCGVFTRDYRHDVM---NSQILVTVPQCLEILMLSPRC 855
Query: 803 RNYVKKVGLMILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRFIGLSTALANAGDL 861
+++ K++ +I DEIH LG E G + E ++ +R F+ LS ++N L
Sbjct: 856 QSWTKRIQYIIFDEIHCLGGEIGAEVWEHLLVTIR---------CPFLALSATISNPDHL 906
Query: 862 ADWL 865
+WL
Sbjct: 907 TEWL 910
Score = 115 (45.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 970 LRQTL-QFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII-KGT 1027
+ QTL + GIG HH + K+R VE LF I+V+ TSTLA G+N+P V+ + +
Sbjct: 1241 VHQTLARRGIGYHHGAMAMKERQTVEMLFRLGYIKVVTATSTLALGINMPCRSVVFAEDS 1300
Query: 1028 EYYDGKTKRYV 1038
+ D R V
Sbjct: 1301 VFLDALNYRQV 1311
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 185 (70.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 60/204 (29%), Positives = 100/204 (49%)
Query: 902 SMNKPAYAAICTHSPTK---PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQ 949
+ ++ Y A+ T+ PV++F SR + + LT+LDL + E R
Sbjct: 507 AQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRC 566
Query: 950 FLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+ D Q L QV ++ + L+ G+G+HH+G+ + +VE LF+ ++VL T
Sbjct: 567 LARLRGSDRQ--LPQVL--HMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATE 622
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV-- 1067
T A GVN+PA V+ +DG T R D + +QM GRAGR D G ++L
Sbjct: 623 TFAMGVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKG 680
Query: 1068 HEPKKS-FYKKFLYEPFPVESSLR 1090
P+ + ++ + +P ++S R
Sbjct: 681 RVPEMADLHRMMMGKPSQLQSQFR 704
Score = 168 (64.2 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 513 YLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 572
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 573 SDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 632
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 633 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 690
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 691 MMMGKPSQLQSQF 703
Score = 112 (44.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 57/210 (27%), Positives = 97/210 (46%)
Query: 648 SFHNLALPQARTSHTELLDLKPLP---------VTALGNNIYEALYN--FSH-FNP--IQ 693
S +L L +A T + L LKP P VT+ + Y + F F P Q
Sbjct: 215 SLEDLVLKEASTVVSTLEPLKPPPQEQWAVPVDVTSPVGDFYRLIPQPAFQWAFEPDVFQ 274
Query: 694 TQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLKAIVRERM 751
Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+KA+ ++
Sbjct: 275 KQAILHLEQH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIKALSNQKF 329
Query: 752 NDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGL 811
D+++ +G +TGD + A +I T E S + + ++ +
Sbjct: 330 RDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEW 378
Query: 812 MILDEIHLLG-AERGPILE-VIVSRMRYIS 839
+I DE+H + AERG + E V++ ++S
Sbjct: 379 VIFDEVHYINDAERGVVWEEVLIMLPEHVS 408
Score = 90 (36.7 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + AERG + E
Sbjct: 340 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWE 397
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 398 EVLIMLPEHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHY 449
Query: 888 I 888
+
Sbjct: 450 L 450
Score = 66 (28.3 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 407 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPL-EHYL 450
Score = 45 (20.9 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 961 RARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQS---LLLLPE 1014
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ E P R + H +AL+ + L++P V L
Sbjct: 729 FSEFPSRKDSKAHEQALADLTKRL---GALEEPDVTGQL 764
>UNIPROTKB|J9P0M0 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102154 EMBL:AAEX03010133 EMBL:AAEX03010134
EMBL:AAEX03010135 Ensembl:ENSCAFT00000044956 Uniprot:J9P0M0
Length = 1708
Score = 164 (62.8 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 48/177 (27%), Positives = 91/177 (51%)
Query: 693 QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN 752
Q ++ ++ + ++ V++ APT SGKT ++ M + ++ VVY+AP KA+V +
Sbjct: 764 QRELLDVVDNNESAVIV-APTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQVAA 822
Query: 753 DWKDRLVSQL--GKEMVEM-TGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKV 809
+R L G+ + + T DY D L+ ++I+ P ++ + + H + +VK++
Sbjct: 823 TVHNRFTKSLPNGEALCGVFTRDYRHDA---LNCQVLITVPACFEILLLSPHRQAWVKRI 879
Query: 810 GLMILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
+I DE+H LG E G + E ++ +R F+ LS ++N L +WL
Sbjct: 880 RYVIFDEVHCLGGEIGAEVWEHLLVMIR---------CPFLALSATISNPEHLTEWL 927
Score = 142 (55.0 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 41/110 (37%), Positives = 55/110 (50%)
Query: 956 EDLQMVLSQVT----DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
E LQMV +V L+ + GIG HH+ L+ KD+ LVE LF I+V+ T TL
Sbjct: 1231 ETLQMVFDRVKFTRKGAELKALARRGIGYHHSSLSFKDKQLVEVLFRKGFIRVVTATGTL 1290
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
A G+N+P V+ + Y+D + QM GRAGR D G
Sbjct: 1291 ALGINMPCKSVVF-------AQNSIYLD--ALNYRQMSGRAGRRGQDLMG 1331
Score = 44 (20.5 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 1184 LSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFA---VD 1240
L V ++FG I P E + ++LP N+ H ++ FA ++
Sbjct: 1479 LVLVLANLFGRRILPAKFQETTIKFYQSKVFLEDLPEDFNDALHEYNMNVTKEFASFLLN 1538
Query: 1241 NNRLDDPHVKANL-LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANS 1294
+L D + L L + +F+ + S+ V+ L S + + I + + NS
Sbjct: 1539 VAKLADMKQEYQLPLSKINFTGKECEDSELVSHLMSCKEGRVAI-SPFVCLSGNS 1592
Score = 38 (18.4 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 387 IVVRDEEQNELETLVQTLCPVE---VKGGPSNKHGKISILIQLY 427
++V DE N L+TL+ + + +K G+ S +++LY
Sbjct: 142 LIVADEGLNHLQTLLFSFLVTQSWAMKVNVVLSSGQTSDVLRLY 185
>UNIPROTKB|E2QSY2 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IEA] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003727
GO:GO:0051607 GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 OMA:QDCTYAD
GO:GO:1900245 GO:GO:1900246 GeneTree:ENSGT00690000102154
EMBL:AAEX03010133 EMBL:AAEX03010134 EMBL:AAEX03010135
Ensembl:ENSCAFT00000014321 Uniprot:E2QSY2
Length = 1711
Score = 164 (62.8 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 48/177 (27%), Positives = 91/177 (51%)
Query: 693 QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN 752
Q ++ ++ + ++ V++ APT SGKT ++ M + ++ VVY+AP KA+V +
Sbjct: 767 QRELLDVVDNNESAVIV-APTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQVAA 825
Query: 753 DWKDRLVSQL--GKEMVEM-TGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKV 809
+R L G+ + + T DY D L+ ++I+ P ++ + + H + +VK++
Sbjct: 826 TVHNRFTKSLPNGEALCGVFTRDYRHDA---LNCQVLITVPACFEILLLSPHRQAWVKRI 882
Query: 810 GLMILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
+I DE+H LG E G + E ++ +R F+ LS ++N L +WL
Sbjct: 883 RYVIFDEVHCLGGEIGAEVWEHLLVMIR---------CPFLALSATISNPEHLTEWL 930
Score = 142 (55.0 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 41/110 (37%), Positives = 55/110 (50%)
Query: 956 EDLQMVLSQVT----DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTL 1011
E LQMV +V L+ + GIG HH+ L+ KD+ LVE LF I+V+ T TL
Sbjct: 1234 ETLQMVFDRVKFTRKGAELKALARRGIGYHHSSLSFKDKQLVEVLFRKGFIRVVTATGTL 1293
Query: 1012 AWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
A G+N+P V+ + Y+D + QM GRAGR D G
Sbjct: 1294 ALGINMPCKSVVF-------AQNSIYLD--ALNYRQMSGRAGRRGQDLMG 1334
Score = 44 (20.5 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 1184 LSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFA---VD 1240
L V ++FG I P E + ++LP N+ H ++ FA ++
Sbjct: 1482 LVLVLANLFGRRILPAKFQETTIKFYQSKVFLEDLPEDFNDALHEYNMNVTKEFASFLLN 1541
Query: 1241 NNRLDDPHVKANL-LFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANS 1294
+L D + L L + +F+ + S+ V+ L S + + I + + NS
Sbjct: 1542 VAKLADMKQEYQLPLSKINFTGKECEDSELVSHLMSCKEGRVAI-SPFVCLSGNS 1595
Score = 38 (18.4 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 387 IVVRDEEQNELETLVQTLCPVE---VKGGPSNKHGKISILIQLY 427
++V DE N L+TL+ + + +K G+ S +++LY
Sbjct: 142 LIVADEGLNHLQTLLFSFLVTQSWAMKVNVVLSSGQTSDVLRLY 185
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 185 (70.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 60/204 (29%), Positives = 100/204 (49%)
Query: 902 SMNKPAYAAICTHSPTK---PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQ 949
+ ++ Y A+ T+ PV++F SR + + LT+LDL + E R
Sbjct: 542 AQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRC 601
Query: 950 FLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTS 1009
+ D Q L QV ++ + L+ G+G+HH+G+ + +VE LF+ ++VL T
Sbjct: 602 LARLRGSDRQ--LPQVL--HMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATE 657
Query: 1010 TLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV-- 1067
T A GVN+PA V+ +DG T R D + +QM GRAGR D G ++L
Sbjct: 658 TFAMGVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKG 715
Query: 1068 HEPKKS-FYKKFLYEPFPVESSLR 1090
P+ + ++ + +P ++S R
Sbjct: 716 RVPEMADLHRMMMGKPSQLQSQFR 739
Score = 168 (64.2 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 548 YLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 607
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 608 SDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 667
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 668 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 725
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 726 MMMGKPSQLQSQF 738
Score = 112 (44.5 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 57/210 (27%), Positives = 97/210 (46%)
Query: 648 SFHNLALPQARTSHTELLDLKPLP---------VTALGNNIYEALYN--FSH-FNP--IQ 693
S +L L +A T + L LKP P VT+ + Y + F F P Q
Sbjct: 250 SLEDLVLKEASTVVSTLEPLKPPPQEQWAVPVDVTSPVGDFYRLIPQPAFQWAFEPDVFQ 309
Query: 694 TQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLKAIVRERM 751
Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+KA+ ++
Sbjct: 310 KQAILHLEQH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIKALSNQKF 364
Query: 752 NDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGL 811
D+++ +G +TGD + A +I T E S + + ++ +
Sbjct: 365 RDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEW 413
Query: 812 MILDEIHLLG-AERGPILE-VIVSRMRYIS 839
+I DE+H + AERG + E V++ ++S
Sbjct: 414 VIFDEVHYINDAERGVVWEEVLIMLPEHVS 443
Score = 90 (36.7 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + AERG + E
Sbjct: 375 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWE 432
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 433 EVLIMLPEHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHY 484
Query: 888 I 888
+
Sbjct: 485 L 485
Score = 66 (28.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 442 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPL-EHYL 485
Score = 45 (20.9 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 996 RARKLEELIRGAQCVHSPRFPAQYVKLQERMQIQKEMERLRFLLSDQS---LLLLPE 1049
Score = 37 (18.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANL 1253
+ E P R + H +AL+ + L++P V L
Sbjct: 764 FSEFPSRKDSKAHEQALADLTKRL---GALEEPDVTGQL 799
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 176 (67.0 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG---------MPEEDLQMVLSQVTDQN 969
PV++F S+R AL + + + + R L +PE D + L Q+ +N
Sbjct: 444 PVIVFSFSKRDCESLALKMSKLDFNTDEERNSLTQIFYNAIELLPEADRE--LPQI--KN 499
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ L+ GIG+HH+GL + ++E LF ++VL T T + G+N+PA V+
Sbjct: 500 ILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRK 559
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DG R+V + +QM GRAGR D G ++++ E
Sbjct: 560 WDGVGFRWVSGG--EYIQMSGRAGRRGLDDRGIVIMMIDE 597
Score = 167 (63.8 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 48/161 (29%), Positives = 80/161 (49%)
Query: 78 LRQGHQAMVFVHSRKDTVKTAQKLVDLA-RRYEDLEVFNNDTHPQLSLIKK-DVMKSRNK 135
+++ + +VF S++D A K+ L E+ + + L+ + D + K
Sbjct: 439 MKKYNPVIVFSFSKRDCESLALKMSKLDFNTDEERNSLTQIFYNAIELLPEADRELPQIK 498
Query: 136 DLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQ 195
+++ L +G+HH+G+L + + E LF EG LKVL T T + G+N+PA TVV +
Sbjct: 499 NILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 558
Query: 196 LYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
+D W G + + GRAGR D GI+I D+
Sbjct: 559 KWDGVGFRWVSGGEYIQMSGRAGRRGLD--DRGIVIMMIDE 597
Score = 104 (41.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 44/179 (24%), Positives = 85/179 (47%)
Query: 680 YEA-LYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVV 738
+EA Y F+ +P Q + ++ VL+ A T +GKT+ AE A+ + + +V+
Sbjct: 176 HEARTYPFT-LDPFQDTAISCIDRNES-VLVSAHTSAGKTVVAEYAIAQ--SLRDKQRVI 231
Query: 739 YIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGI 796
Y +P+KA+ ++ + + + +G MTGD T PD L+ I+
Sbjct: 232 YTSPIKALSNQKFRELQ-AIFGDVGL----MTGDVTINPDAGCLVMTTEILR-------- 278
Query: 797 SRNWHSRNYVKKVGLMILDEIHLL-GAERGPILE--VIV--SRMRYI--SSQTERAVRF 848
S + +++V ++ DE+H + RG + E +I+ ++ Y+ S+ A+ F
Sbjct: 279 SMLYRGSEVMREVAWVVFDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEF 337
Score = 62 (26.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 8 IRIVGLSATLPNYLEVAQFL-RV-NPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN +E A+++ ++ N + + D +RP PL Q Y+
Sbjct: 322 VHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD--FRPTPL-QHYL 365
Score = 61 (26.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/124 (22%), Positives = 51/124 (41%)
Query: 769 MTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL-GAERG 825
MTGD T PD L+ I+ S + +++V ++ DE+H + RG
Sbjct: 257 MTGDVTINPDAGCLVMTTEILR--------SMLYRGSEVMREVAWVVFDEVHYMRDKSRG 308
Query: 826 PILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL-GVGEIGLFNFKPSVRPVPL 884
+ E + + V ++ LS + NA + A+W+ + RP PL
Sbjct: 309 VVWEETIILL-------PDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPL 361
Query: 885 EVHI 888
+ ++
Sbjct: 362 QHYL 365
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 176 (67.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 58/168 (34%), Positives = 84/168 (50%)
Query: 73 KVVDSLRQGH--QAMVFVHSRKDTVKTAQKLV--DLARRYEDLEVFNNDTHPQLSLIKK- 127
+VV LR+ + A +FV S+K + A L D E + + L+ +K+
Sbjct: 617 QVVQHLRKENLLPACIFVFSKKRCEQNADSLSNQDFCNASEK-SLIHITIEKSLTRLKQE 675
Query: 128 DVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAH 187
D + L EL + VHH G+L + + E LF++ L+KVL T T A G+NLP
Sbjct: 676 DRTLPQILRLRELLSRGIAVHHGGLLPIMKEIVEILFAKTLVKVLFATETFAMGLNLPTR 735
Query: 188 TVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITS 232
TVV G + +D K G+RDL G + GRAGR D G I++ S
Sbjct: 736 TVVFSGFRKHDGK--GFRDLLPGEYTQMAGRAGRRGLDNVGYVIVVNS 781
Score = 173 (66.0 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 62/187 (33%), Positives = 87/187 (46%)
Query: 919 PVLIFVSSRRQTRLTALDLIQ--FA-ASDET------PRQFLGMPEEDLQMVLSQVTDQN 969
P IFV S+++ A L F AS+++ + + +ED L Q+
Sbjct: 629 PACIFVFSKKRCEQNADSLSNQDFCNASEKSLIHITIEKSLTRLKQED--RTLPQIL--R 684
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
LR+ L GI +HH GL + +VE LFA ++VL T T A G+NLP V+ G
Sbjct: 685 LRELLSRGIAVHHGGLLPIMKEIVEILFAKTLVKVLFATETFAMGLNLPTRTVVFSGFRK 744
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE------PKKSFYKKFLYEPF 1083
+DGK R D + QM GRAGR D G VI+V+ P + K L +P
Sbjct: 745 HDGKGFR--DLLPGEYTQMAGRAGRRGLDNVGY-VIVVNSGKDEAPPAGALRKMILGDPT 801
Query: 1084 PVESSLR 1090
+ S R
Sbjct: 802 KLRSQFR 808
Score = 120 (47.3 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 677 NNIYEALYNFSHFNPIQTQIFH--ILYHTDN--NVLLGAPTGSGKTISAELAMLHLFNTQ 732
+N +E + + + P + F +YH +N +V + A T +GKT+ AE A+ +
Sbjct: 306 SNFHELVPDMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIA--LAAK 363
Query: 733 SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEK 792
K +Y +P+KA+ ++ D+K+ + G T D+ A +I T E
Sbjct: 364 HMTKAIYTSPIKALSNQKFRDFKNTF---------DDVGILTGDVQINPEASCLIMTTEI 414
Query: 793 WDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIV 832
S + + ++ V +I DE+H + ERG + E ++
Sbjct: 415 LR--SMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVI 453
Score = 91 (37.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 764 KEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-A 822
K + G T D+ A +I T E S + + ++ V +I DE+H +
Sbjct: 386 KNTFDDVGILTGDVQINPEASCLIMTTEILR--SMLYRGADLIRDVEFVIFDEVHYVNDL 443
Query: 823 ERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRP 881
ERG + E ++ + V I LS + N + A W+G + ++ + RP
Sbjct: 444 ERGVVWEEVIIML-------PEHVTLILLSATVPNTQEFASWVGRTKKKDIYVISTAKRP 496
Query: 882 VPLEVHIQGYPGKF 895
VPLE ++ KF
Sbjct: 497 VPLEHYLWAGKDKF 510
Score = 69 (29.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLS 67
+ ++ LSAT+PN E A ++ + ++ ++ RP+PL + Y+ + F
Sbjct: 460 VTLILLSATVPNTQEFASWVGRTKKKDIYVISTAKRPVPL-EHYLWAGKDKF-------- 510
Query: 68 EICYKKVVDS----LRQGHQAMVFVHSRKDTVKTAQKLVD 103
K+VDS L G + + S KD +K AQK +
Sbjct: 511 -----KIVDSNKRFLESGWKQADDIISGKDKIK-AQKAAE 544
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 252 QFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+ I L +++ + TV N +E +W+G T
Sbjct: 451 EVIIMLPEHVTLILLSATVPNTQEFASWVGRT 482
Score = 43 (20.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 497 LPAEILRKLEERGADLDR 514
+ EILR + RGADL R
Sbjct: 410 MTTEILRSMLYRGADLIR 427
Score = 39 (18.8 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 383 EFENIVVRDEEQNELETLVQTLCP 406
E E DEE+++++TL+ P
Sbjct: 252 EDEESASEDEEEDDIDTLLPVEFP 275
Score = 39 (18.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 291 LNPLAYGIGWDEVI 304
+N L G+ W+EVI
Sbjct: 440 VNDLERGVVWEEVI 453
>WB|WBGene00016194 [details] [associations]
symbol:C28H8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0004427 "inorganic diphosphatase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 EMBL:FO080703
eggNOG:COG4581 GeneTree:ENSGT00690000102154 PIR:A88470
RefSeq:NP_498283.1 ProteinModelPortal:Q09475 SMR:Q09475
STRING:Q09475 PaxDb:Q09475 EnsemblMetazoa:C28H8.3.1
EnsemblMetazoa:C28H8.3.2 GeneID:175834 KEGG:cel:CELE_C28H8.3
UCSC:C28H8.3.1 CTD:175834 WormBase:C28H8.3 HOGENOM:HOG000018763
InParanoid:Q09475 OMA:YARFRNK NextBio:889866 Uniprot:Q09475
Length = 1714
Score = 153 (58.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 98 AQKLVDLARRYEDLEVFN-NDTHPQL--SLIKKDVMKSRNKD----LIELFGLAVGVHHA 150
A K LAR E ++ N P + ++++ ++ ++ L++LF +G HHA
Sbjct: 1228 AMKKAKLARALERFKLRGRNGGDPDIYAKMVERMQKGAKTRESTQVLLKLFERGIGYHHA 1287
Query: 151 GMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGML 210
G+ +RG E LF G L VL T+TL+ GVN+P TV+ G +R +
Sbjct: 1288 GLNTVERGAVEVLFRSGNLAVLFSTSTLSLGVNMPCKTVMF-GVDTLQLTPLLYRQMS-- 1344
Query: 211 DIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQL 247
GRAGR FD SG I ++ + RLLT+ L
Sbjct: 1345 ---GRAGRRGFDHSGNVIFMSI--PTSKVRRLLTASL 1376
Score = 148 (57.2 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 947 PRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLV 1006
P + M E + ++ + Q L + + GIG HHAGLN +R VE LF + + VL
Sbjct: 1251 PDIYAKMVERMQKGAKTRESTQVLLKLFERGIGYHHAGLNTVERGAVEVLFRSGNLAVLF 1310
Query: 1007 CTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDIL--QMMGRAGRPQYDQHGKAV 1064
TSTL+ GVN+P V+ G + +T +L QM GRAGR +D G +
Sbjct: 1311 STSTLSLGVNMPCKTVMF-GVD----------TLQLTPLLYRQMSGRAGRRGFDHSGNVI 1359
Query: 1065 IL 1066
+
Sbjct: 1360 FM 1361
Score = 139 (54.0 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 705 NNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N+ L+ APT +GKT + + + + + VVY+AP KA++ + R ++ K
Sbjct: 800 NSALIIAPTSAGKTFVSYYCIEKVLRSSDNDVVVYVAPSKALINQVCGSVYARFRNKSMK 859
Query: 765 EMVEMTGDYTPDLMA-LLSADIIISTPEKWDGI--SRNWHSRNYVKKVGLMILDEIHLLG 821
+ + G T + + ++I+ PE + SR + +V + ++ DE+H +G
Sbjct: 860 RGISLFGTLTQEYSQNAMQCQVLITVPECLQELMLSRTPAVQKFVSHIKYVVFDEVHSIG 919
Query: 822 A-ERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGE 869
A E I E ++ ++ F+ LS + NA L +WL E
Sbjct: 920 ASEESHIWEQLLLLIQ---------CPFLALSATIGNANKLHEWLNSSE 959
Score = 47 (21.6 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 54 ISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFV---HSRKDTVKTAQKLV-DLARRYE 109
I E N A+++ ++E K+ +QG ++++F+ +S D +T V ++A R E
Sbjct: 619 ILEANKKAKDQKVAESEKVKIKYGCQQGKESVIFLNNLYSSLDLPETRALCVYEIAVR-E 677
Query: 110 DLEVFNNDTHPQLSLIKKDVMKSRNKDLI 138
+F D H K++V ++ DL+
Sbjct: 678 GRTIF--DQHQGTD--KQEVRRNAAIDLV 702
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 52 IGISEPNFAARNELLSEIC----YKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARR 107
IG SE + LL C + + + H+ + K K +L++ R
Sbjct: 918 IGASEESHIWEQLLLLIQCPFLALSATIGNANKLHEWLNSSEQAKSAGKRKVELINYGER 977
Query: 108 YEDLE--VFN-NDTH 119
Y +LE + N ND H
Sbjct: 978 YSELELSILNINDPH 992
Score = 41 (19.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 72 KKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKK---D 128
+K++DS+ +G+ A++ + + ++ R D +V P +LI +
Sbjct: 790 RKMLDSVDRGNSALIIAPTSAGKTFVSYYCIEKVLRSSDNDVVVY-VAPSKALINQVCGS 848
Query: 129 VM-KSRNKDL---IELFG 142
V + RNK + I LFG
Sbjct: 849 VYARFRNKSMKRGISLFG 866
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 92 KDTVKTAQKLVDLARRYED 110
K +K KLV LA+R D
Sbjct: 1183 KYMIKDESKLVKLAKRKRD 1201
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 182 (69.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 568 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 623
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 624 MSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 683
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 684 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 741
Query: 1087 SSLR 1090
S R
Sbjct: 742 SQFR 745
Score = 169 (64.5 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 554 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 613
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 614 SDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 673
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 674 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 731
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 732 MMMGKPSQLQSQF 744
Score = 104 (41.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 46/172 (26%), Positives = 82/172 (47%)
Query: 669 PLPVTALGNNIYEALYN--FSH-FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAE 722
P+ VT+ + Y + F F P Q Q I H+ H ++V + A T +GKT+ AE
Sbjct: 286 PVDVTSPVGDFYRLIPQPAFQWAFEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAE 343
Query: 723 LAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALL 781
A+ Q M + +Y +P+KA+ ++ D+++ +G +TGD +
Sbjct: 344 YAIAL---AQKHMTRTIYTSPIKALSNQKFRDFRNTF-GDVGL----LTGD----VQLHP 391
Query: 782 SADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIV 832
A +I T E S + + ++ + +I DE+H + AERG + E ++
Sbjct: 392 EASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVL 441
Score = 88 (36.0 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + AERG + E
Sbjct: 381 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWE 438
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 439 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHY 490
Query: 888 I 888
+
Sbjct: 491 L 491
Score = 66 (28.3 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 448 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPL-EHYL 491
Score = 45 (20.9 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 1001 RARKLEELIRGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 1054
Score = 41 (19.5 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P V L+
Sbjct: 770 FSEFPSRKDSKAHEQALAELTKKL---GALEEPEVTGQLV 806
Score = 38 (18.4 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 444 LPDHVSIILLSATVPNALEFADWIG 468
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 182 (69.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 568 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 623
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 624 MSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 683
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 684 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 741
Query: 1087 SSLR 1090
S R
Sbjct: 742 SQFR 745
Score = 171 (65.3 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 554 YLSLLASLRAREQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 613
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 614 SDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 673
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 674 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 731
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 732 MMMGKPSQLQSQF 744
Score = 104 (41.7 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 46/172 (26%), Positives = 82/172 (47%)
Query: 669 PLPVTALGNNIYEALYN--FSH-FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAE 722
P+ VT+ + Y + F F P Q Q I H+ H ++V + A T +GKT+ AE
Sbjct: 286 PVDVTSPVGDFYRLIPQPAFQWAFEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAE 343
Query: 723 LAMLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALL 781
A+ Q M + +Y +P+KA+ ++ D+++ +G +TGD +
Sbjct: 344 YAIAL---AQKHMTRTIYTSPIKALSNQKFRDFRNTF-GDVGL----LTGD----VQLHP 391
Query: 782 SADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILEVIV 832
A +I T E S + + ++ + +I DE+H + AERG + E ++
Sbjct: 392 EASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVL 441
Score = 88 (36.0 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + AERG + E
Sbjct: 381 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWE 438
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 439 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHY 490
Query: 888 I 888
+
Sbjct: 491 L 491
Score = 66 (28.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 448 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPL-EHYL 491
Score = 47 (21.6 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTA-LDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P +V R + ++ ++ ++F SD++ L +PE
Sbjct: 1001 RARKLEELIRGAQCVHSPRFPAQ-YVKLRERMQIQKEMERLRFLLSDQS---LLLLPE 1054
Score = 40 (19.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P V L+
Sbjct: 770 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDVTGQLV 806
Score = 38 (18.4 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 444 LPDHVSIILLSATVPNALEFADWIG 468
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 182 (69.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 375 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 430
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 431 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 490
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 491 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 548
Query: 1087 SSLR 1090
S R
Sbjct: 549 SQFR 552
Score = 171 (65.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 361 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 420
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 421 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 480
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 481 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 538
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 539 MMMGKPSQLQSQF 551
Score = 99 (39.9 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 689 FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLK 744
F P Q Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+K
Sbjct: 116 FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIK 170
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
A+ ++ D+++ +G +TGD + A +I T E S + +
Sbjct: 171 ALSNQKFRDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSD 219
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + +I DE+H + ERG + E ++
Sbjct: 220 VIRDLEWVIFDEVHYINDVERGVVWEEVL 248
Score = 84 (34.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 188 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWE 245
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 246 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY 297
Query: 888 I 888
+
Sbjct: 298 L 298
Score = 66 (28.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 255 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPL-EHYL 298
Score = 46 (21.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 808 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 861
Score = 38 (18.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 251 LPDHVSIILLSATVPNALEFADWIG 275
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 577 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 613
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 182 (69.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 375 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 430
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 431 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 490
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 491 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 548
Query: 1087 SSLR 1090
S R
Sbjct: 549 SQFR 552
Score = 171 (65.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 361 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 420
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 421 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 480
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 481 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 538
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 539 MMMGKPSQLQSQF 551
Score = 99 (39.9 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 689 FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLK 744
F P Q Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+K
Sbjct: 116 FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIK 170
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
A+ ++ D+++ +G +TGD + A +I T E S + +
Sbjct: 171 ALSNQKFRDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSD 219
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + +I DE+H + ERG + E ++
Sbjct: 220 VIRDLEWVIFDEVHYINDVERGVVWEEVL 248
Score = 84 (34.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 188 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWE 245
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 246 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY 297
Query: 888 I 888
+
Sbjct: 298 L 298
Score = 66 (28.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 255 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPL-EHYL 298
Score = 46 (21.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 808 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 861
Score = 38 (18.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 251 LPDHVSIILLSATVPNALEFADWIG 275
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 577 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 613
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 182 (69.1 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 410 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 465
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 466 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 525
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 526 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 583
Query: 1087 SSLR 1090
S R
Sbjct: 584 SQFR 587
Score = 171 (65.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 396 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 455
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 456 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 515
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 516 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 573
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 574 MMMGKPSQLQSQF 586
Score = 99 (39.9 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 689 FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLK 744
F P Q Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+K
Sbjct: 151 FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIK 205
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
A+ ++ D+++ +G +TGD + A +I T E S + +
Sbjct: 206 ALSNQKFRDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSD 254
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + +I DE+H + ERG + E ++
Sbjct: 255 VIRDLEWVIFDEVHYINDVERGVVWEEVL 283
Score = 84 (34.6 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 223 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWE 280
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 281 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY 332
Query: 888 I 888
+
Sbjct: 333 L 333
Score = 66 (28.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 290 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPL-EHYL 333
Score = 46 (21.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 843 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 896
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 286 LPDHVSIILLSATVPNALEFADWIG 310
Score = 37 (18.1 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 612 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 648
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 182 (69.1 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 410 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 465
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 466 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 525
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 526 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 583
Query: 1087 SSLR 1090
S R
Sbjct: 584 SQFR 587
Score = 171 (65.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 396 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 455
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 456 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 515
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 516 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 573
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 574 MMMGKPSQLQSQF 586
Score = 99 (39.9 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 689 FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLK 744
F P Q Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+K
Sbjct: 151 FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIK 205
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
A+ ++ D+++ +G +TGD + A +I T E S + +
Sbjct: 206 ALSNQKFRDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSD 254
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + +I DE+H + ERG + E ++
Sbjct: 255 VIRDLEWVIFDEVHYINDVERGVVWEEVL 283
Score = 84 (34.6 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 223 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWE 280
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 281 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY 332
Query: 888 I 888
+
Sbjct: 333 L 333
Score = 66 (28.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 290 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPL-EHYL 333
Score = 46 (21.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 843 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 896
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 286 LPDHVSIILLSATVPNALEFADWIG 310
Score = 37 (18.1 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 612 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 648
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 169 (64.5 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVT--DQNLRQ---- 972
P+++F S+++ + A QF D + + E ++Q++ D+ LRQ
Sbjct: 372 PIIVFCFSKKECEINAH---QFGKLDLNDTENKELVTEIFDSAINQLSEEDRGLRQFEEM 428
Query: 973 --TLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYY 1030
L GIG+HH+GL + LVE LF +++L T T + G+N+PA V+ + +
Sbjct: 429 RSLLLRGIGIHHSGLLPILKELVEILFQEGLVRILFATETFSIGLNMPARTVLFTKAQKF 488
Query: 1031 DGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
G R++ + +QM GRAGR D G +++++ +
Sbjct: 489 SGNNFRWLTSG--EYMQMSGRAGRRGIDTKGLSIVILDQ 525
Score = 161 (61.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/152 (31%), Positives = 81/152 (53%)
Query: 85 MVFVHSRKDTVKTAQKL--VDLA-RRYEDL--EVFNNDTHPQLSLIKKDVMKSRNKDLIE 139
+VF S+K+ A + +DL ++L E+F++ + QLS ++D + +++
Sbjct: 374 IVFCFSKKECEINAHQFGKLDLNDTENKELVTEIFDSAIN-QLS--EEDRGLRQFEEMRS 430
Query: 140 LFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDP 199
L +G+HH+G+L + L E LF EGL+++L T T + G+N+PA TV+ Q +
Sbjct: 431 LLLRGIGIHHSGLLPILKELVEILFQEGLVRILFATETFSIGLNMPARTVLFTKAQKFSG 490
Query: 200 KAGGWRDLG-MLDIFGRAGRPQFDRSGEGIII 230
W G + + GRAGR D G I+I
Sbjct: 491 NNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVI 522
Score = 106 (42.4 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
Y F +P Q+ + ++ VL+ A T +GKT+ AE A+ + +V+Y +P+
Sbjct: 122 YPFE-LDPFQSTAIKCVERMES-VLVSAHTSAGKTVIAEYAIAQALKNRQ--RVIYTSPI 177
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSR 803
K++ ++ + L+S+ G ++ MTGD + + SA +I T E + + +
Sbjct: 178 KSLSNQKYRE----LLSEFG-DVGLMTGDVSINP----SASCLIMTTEILRAML--YKNS 226
Query: 804 NYVKKVGLMILDEIHLL-GAERGPILE----VIVSRMRYI--SSQTERAVRF 848
+ ++ +I DE+H + +RG + E ++ +R+I S+ A++F
Sbjct: 227 EIMHEIAWVIFDEVHYMRDKDRGVVWEETLILLPDAIRFIFLSATLPNALQF 278
Score = 78 (32.5 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 37/143 (25%), Positives = 63/143 (44%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q +E++ GD T D+ SA +I T E + + + + ++ +I
Sbjct: 180 LSNQKYRELLSEFGDVGLMTGDVSINPSASCLIMTTEILRAML--YKNSEIMHEIAWVIF 237
Query: 815 DEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGL 872
DE+H + +RG + E + + A+RFI LS L NA A W+ + +
Sbjct: 238 DEVHYMRDKDRGVVWEETLILL-------PDAIRFIFLSATLPNALQFARWISEIHKQPC 290
Query: 873 FNFKPSVRPVPLE--VHIQGYPG 893
RP PL+ ++ QG G
Sbjct: 291 HVVYTDYRPTPLQHFIYPQGADG 313
Score = 42 (19.8 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 370 NDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKH 417
N ++ + VS S ++ N +++D+ + L + + P + P NKH
Sbjct: 66 NSLKLSDAVSES-KYLNPLLKDKRHDRSFALHKVVVPDDYDYIPLNKH 112
Score = 39 (18.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 355 YSSVETYNEMLRRHMNDSEVIEMVSHSSEFEN 386
Y V+ N+ + N +V+E++ HS+ EN
Sbjct: 315 YMLVDEKNKF--KTENFKKVLEVLDHSTRQEN 344
>UNIPROTKB|E3W980 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 GO:GO:0004386 EMBL:AC096768
HGNC:HGNC:18536 IPI:IPI00965172 ProteinModelPortal:E3W980
SMR:E3W980 Ensembl:ENST00000510985 UCSC:uc010ikb.3
ArrayExpress:E3W980 Bgee:E3W980 Uniprot:E3W980
Length = 1034
Score = 194 (73.4 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 97/398 (24%), Positives = 174/398 (43%)
Query: 4 TQRMIRIVGLSATLPNYLEVAQFLRVN-------P-EMG--LFFFDSSYRPIPLAQQYIG 53
T + +I+G+SATL N ++ +FL+ P E+ L D+ Y A+ +
Sbjct: 420 TSKTTQIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMT 479
Query: 54 ISEP-NFAARNEL--LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVD-LARRY- 108
S N+ + L + +V + + +VF S+K+ A+ + L++ Y
Sbjct: 480 FSRLLNYKYSDTLKKMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKFLSKEYL 539
Query: 109 EDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGL 168
+ E + L I + K I FG+A HH+G+ +R L E +S G+
Sbjct: 540 KHKEKEKCEVIKNLKNIGNGNLCPVLKRTIP-FGVAY--HHSGLTSDERKLLEEAYSTGV 596
Query: 169 LKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGI 228
L + CT+TLA GVNLPA V+++ Y K R+ + GRAGR D GE I
Sbjct: 597 LCLFTCTSTLAAGVNLPARRVILRAP--YVAKEFLKRNQ-YKQMIGRAGRAGIDTIGESI 653
Query: 229 IITSHDKLAYYLRLLTSQLP-----IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+I L L+T L + +F ++ + + L TN+ + ++ T
Sbjct: 654 LILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGT 713
Query: 284 YLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEK-SGNFYCT 342
+ ++ K+ + W E+ + L ++ L L K + + +E+ NF+ T
Sbjct: 714 FFGVQQKVLLKEKSL-W-EITVESLRYLTEKGL-------LQKDTIYKSEEEVQYNFHIT 764
Query: 343 ELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSH 380
+LGR + I + + L++ + + V+E + H
Sbjct: 765 KLGRASFKGTIDLAYCDILYRDLKKGL-EGLVLESLLH 801
Score = 192 (72.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 70/294 (23%), Positives = 133/294 (45%)
Query: 812 MILDEIHLLG-AERGPILEVIVSRMRYISSQT------------ERAVRFIGLS--TALA 856
++ +++H++G RG LE+ ++++ Y S T E +F+ T+
Sbjct: 393 IVQEKLHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQAEYYTSQF 452
Query: 857 NAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHS- 915
+L ++L + + ++ + Y Y + M+ A+ T
Sbjct: 453 RPVELKEYLKINDT-IYEVDSKAENGMTFSRLLNYK---YSDTLKKMDPDHLVALVTEVI 508
Query: 916 PTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE-EDLQMV--LSQVTDQNL-- 970
P L+F S++ A + +F + +++L E E +++ L + + NL
Sbjct: 509 PNYSCLVFCPSKKNCENVAEMICKFLS-----KEYLKHKEKEKCEVIKNLKNIGNGNLCP 563
Query: 971 --RQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE 1028
++T+ FG+ HH+GL +R L+EE ++ + + CTSTLA GVNLPA VI++
Sbjct: 564 VLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPY 623
Query: 1029 YYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP 1082
KR QM+GRAGR D G++++++ E K + + +P
Sbjct: 624 VAKEFLKR------NQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLELITKP 671
Score = 75 (31.5 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMN 752
N++ PT GKT+ AE+ ML L + D V+ I P AIV+E+++
Sbjct: 354 NLIYSLPTSGGKTLVAEILMLQELLCCRKD--VLMILPYVAIVQEKLH 399
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 178 (67.7 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ L+ GIG+HH+G+ + +VE LF N +++L T T A GVN+PA V+ +
Sbjct: 574 LKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKK 633
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVIL 1066
+DG R + P + +QM GRAGR +D+ G A+I+
Sbjct: 634 FDGLEMRNLK-P-GEYIQMAGRAGRRGHDETGTAIIM 668
Score = 161 (61.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 45/124 (36%), Positives = 66/124 (53%)
Query: 135 KDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGT 194
KD +E +GVHH+G+L + + E LF GL+K+L T T A GVN+PA TVV
Sbjct: 575 KDALER---GIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSC 631
Query: 195 QLYDP-KAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHD-KLAYYLRLLTSQLP--IE 250
+ +D + + + + GRAGR D +G II+ + LR + LP ++
Sbjct: 632 KKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELRPMILGLPEKLQ 691
Query: 251 SQFI 254
SQFI
Sbjct: 692 SQFI 695
Score = 90 (36.7 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 32/127 (25%), Positives = 62/127 (48%)
Query: 707 VLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEM 766
V + A T +GKT+ AE A+ + + + +Y +P+KA+ ++ D++ K++
Sbjct: 280 VFVAAHTSAGKTVVAEYAIA--LSKRDLTRTIYTSPIKALSNQKYRDFRKTF-----KDV 332
Query: 767 VEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERG 825
+TGD L +A +I T E S + + + + +I DE+H + ERG
Sbjct: 333 GLITGD----LQIEPTASCLIMTTEILR--SMLYCGSDVTRDLEWVIFDEVHYINNPERG 386
Query: 826 PILEVIV 832
+ E ++
Sbjct: 387 HVWEEVI 393
Score = 76 (31.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 32/116 (27%), Positives = 51/116 (43%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T DL +A +I T E S + + + + +I DE+H + ERG + E
Sbjct: 333 GLITGDLQIEPTASCLIMTTEILR--SMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWE 390
Query: 830 VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPL 884
++ + V I LS + N +LADW+G + ++ RPVPL
Sbjct: 391 EVIILL-------PEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPL 439
Score = 72 (30.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQ-QYIG 53
+ I+ LSAT+PN LE+A ++ + ++ + RP+PL Y G
Sbjct: 400 VNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTG 446
Score = 43 (20.2 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 252 QFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+ I L +++N + TV N E W+G T
Sbjct: 391 EVIILLPEHVNIIMLSATVPNTLELADWVGST 422
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 177 (67.4 bits), Expect = 2.3e-12, Sum P(5) = 2.3e-12
Identities = 47/117 (40%), Positives = 64/117 (54%)
Query: 949 QFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCT 1008
Q LG ED L Q+ +++ L+ GIG+HH GL + LVE LF+ + ++VL T
Sbjct: 730 QSLGRLCED-DKSLPQILQ--MKELLERGIGVHHGGLLPIVKELVEILFSKSLVKVLFAT 786
Query: 1009 STLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVI 1065
T A GVN+PA V+ T +DG T R D + QM GRAGR D+ G +I
Sbjct: 787 ETFAMGVNMPAKTVVYSSTRKHDGITFR--DLIPGEYTQMSGRAGRRGLDKVGTVII 841
Score = 176 (67.0 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 67/208 (32%), Positives = 105/208 (50%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL---VDLARRYE--DLEVFNNDTHPQLS 123
+ K++++L+ Q ++F S+ + A L V+L + E + VF + +L
Sbjct: 677 WSKLINTLKDKQQLPVIIFSFSKNKCQEYAGSLGQSVNLTQGNEKSQIRVFIEQSLGRLC 736
Query: 124 LIKKDVMKS-RNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV 182
K + + + K+L+E +GVHH G+L + L E LFS+ L+KVL T T A GV
Sbjct: 737 EDDKSLPQILQMKELLER---GIGVHHGGLLPIVKELVEILFSKSLVKVLFATETFAMGV 793
Query: 183 NLPAHTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYY 239
N+PA TVV T+ +D +RDL G + GRAGR D+ G +IIT Y
Sbjct: 794 NMPAKTVVYSSTRKHDGIT--FRDLIPGEYTQMSGRAGRRGLDKVGT-VIIT-------Y 843
Query: 240 LRLLTSQLPIESQFISSLKDNLNAEVAL 267
+ + Q IES + + LN++ L
Sbjct: 844 WKDIPEQATIESMILGT-PSRLNSQFRL 870
Score = 101 (40.6 bits), Expect = 2.3e-12, Sum P(5) = 2.3e-12
Identities = 51/210 (24%), Positives = 99/210 (47%)
Query: 684 YNFSHFNPIQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAP 742
Y F + Q Q I H+ +V + A T +GKT+ AE A+ + + +Y +P
Sbjct: 430 YPFD-LDSFQKQAIVHM--EQGESVFITAHTSAGKTVIAEYAIAMAAKNMT--RAIYTSP 484
Query: 743 LKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRN--W 800
+KA+ ++ D+K+ + +G +TGD + ++ S+ ++++T I R+ +
Sbjct: 485 IKALSNQKFRDFKNTF-NDVGL----ITGDVS---ISPSSSCLVLTTE-----ILRSMLY 531
Query: 801 HSRNYVKKVGLMILDEIHLLG-AERGPILE-VIVSRMRYISSQTERAVRFIGLSTALANA 858
+ ++ + +I DE+H L ERG + E VI+ Y+ A +S L A
Sbjct: 532 KGADLIRDIEWVIFDEVHYLNDLERGVVWEEVIIMLPPYVKMVFLSAT----VSNPLEFA 587
Query: 859 GDLADWLGVGEIGLFNFKPSVRPVPLEVHI 888
+ ++ ++ + RP+PLE +I
Sbjct: 588 QWIGR---TKQLPIYVIGTTKRPIPLEHYI 614
Score = 77 (32.2 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+++V LSAT+ N LE AQ++ ++ ++ ++ RPIPL + YI
Sbjct: 571 VKMVFLSATVSNPLEFAQWIGRTKQLPIYVIGTTKRPIPL-EHYI 614
Score = 47 (21.6 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 350 HFYIQYSSVETYNEMLRRHM----NDSEV----IEMVSHSSEFENIVVRDEEQNE 396
H+Y +S + YN+ ++ + ND+ + + ++S SS E V D++ ++
Sbjct: 934 HYYKLFSQAKKYNQQIQNIILNLPNDNHLSIGRVVVLSTSSNIEKEVNDDDDDDD 988
Score = 45 (20.9 bits), Expect = 2.3e-12, Sum P(5) = 2.3e-12
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 1355 LQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRR--DIDGENSLTLNIRMDK 1402
LQ I + + ++L+ P+ ++L + ID EN++TL R+ +
Sbjct: 1163 LQYAIRDAKYTASDENLKLMPQFNIRLDILHELGYIDDENTVTLKGRVSR 1212
Score = 45 (20.9 bits), Expect = 2.3e-12, Sum P(5) = 2.3e-12
Identities = 11/57 (19%), Positives = 28/57 (49%)
Query: 367 RHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVE--VKGGPSNKHGKIS 421
R ++E E+ + +++ + +EE +EL+ + +T ++ +K P +S
Sbjct: 314 RKREEAEEAEVYEDDDQEDDLDIEEEELDELDDIEKTKEEIDDIIKSPPQPTSSSLS 370
Score = 44 (20.5 bits), Expect = 8.5e-07, Sum P(6) = 8.5e-07
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 497 LPAEILRKLEERGADLDRLQEM----EEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATV 552
L EILR + +GADL R E E + L R ++ Y + LSATV
Sbjct: 521 LTTEILRSMLYKGADLIRDIEWVIFDEVHYLNDLERGVVWEEVIIMLPPYVKMVFLSATV 580
Query: 553 S 553
S
Sbjct: 581 S 581
Score = 42 (19.8 bits), Expect = 3.2e-06, Sum P(5) = 3.2e-06
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 291 LNPLAYGIGWDEVI 304
LN L G+ W+EVI
Sbjct: 551 LNDLERGVVWEEVI 564
Score = 40 (19.1 bits), Expect = 8.5e-07, Sum P(6) = 8.5e-07
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 668 KPLP----VTALGNNIYEALYNFSHFNPI-QTQIFHILYHTDNN 706
+P+P + N +++ + + +F P ++ LY TDNN
Sbjct: 606 RPIPLEHYIHTPSNELFKIVDSNRNFLPSGYNSAYNSLYKTDNN 649
Score = 39 (18.8 bits), Expect = 2.3e-12, Sum P(5) = 2.3e-12
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 14 SATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKK 73
S LPN+ L PE+ SS + I + NF+ + E+LS+I ++
Sbjct: 45 SFDLPNWYVNPTGLSAQPEITPIAPQSSIISPTIPNNCIQLF--NFSDKEEILSDI-RRE 101
Query: 74 VVDSLRQGHQ 83
+D + H+
Sbjct: 102 YLDFSIESHK 111
Score = 39 (18.8 bits), Expect = 8.8e-12, Sum P(5) = 8.8e-12
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 1365 SRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLN 1397
+R+ D + +++ +RL +RDI +SL +N
Sbjct: 1346 ARVIGDTKLLQKMEEAMRLIKRDIVFTSSLYVN 1378
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(5) = 2.0e-09
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 962 LSQVTDQNLRQTLQFGI 978
L V D L TL+FG+
Sbjct: 1285 LDVVPDDKLETTLKFGL 1301
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(6) = 3.8e-06
Identities = 7/37 (18%), Positives = 20/37 (54%)
Query: 353 IQYS-SVETYNEMLRRHMNDSEVIEMVSHSSEFENIV 388
I+Y ++++ + HM E + + +H+S + ++
Sbjct: 428 IEYPFDLDSFQKQAIVHMEQGESVFITAHTSAGKTVI 464
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 173 (66.0 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 46/122 (37%), Positives = 65/122 (53%)
Query: 966 TDQNLRQTLQF------GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA 1019
+D+NL Q L+ GIG+HHAGL + +VE LF I+VL T T A GVN PA
Sbjct: 697 SDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPA 756
Query: 1020 HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE--PKKSFYKK 1077
V+ +DGK R + P + QM GRAGR D+ G V++ + P +S ++
Sbjct: 757 RTVVFDALRKFDGKEFRQL-LP-GEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRR 814
Query: 1078 FL 1079
+
Sbjct: 815 VI 816
Score = 164 (62.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 66/216 (30%), Positives = 103/216 (47%)
Query: 51 YIGISEPNFAARNELLSEICYKKVVDSLRQGH--QAMVFVHSRKDTVKTAQKLV--DLAR 106
Y G S+ N A R S + +++ L + +VF S+ + A L DL
Sbjct: 619 YSGNSQNNGAFRRSAASN--WLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTS 676
Query: 107 RYE--DLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLF 164
E ++ VF + +L +++ + L L +GVHHAG+L + + E LF
Sbjct: 677 SSEKSEIRVFCDKAFSRLKGSDRNLPQVLR--LQSLLHRGIGVHHAGLLPIVKEVVEMLF 734
Query: 165 SEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQF 221
G++KVL T T A GVN PA TVV + +D K +R L G + GRAGR
Sbjct: 735 CRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKE--FRQLLPGEYTQMAGRAGRRGL 792
Query: 222 DRSGEGIIITSHDKLAYY--LR--LLTSQLPIESQF 253
D++G +++ D++ LR ++ S +ESQF
Sbjct: 793 DKTGT-VVVMCRDEVPDESDLRRVIVGSATRLESQF 827
Score = 100 (40.3 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 430 GLLTGDVSIRPEASCLIMTTEILR--SMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWE 487
Query: 830 VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSV-RPVPLEVHI 888
++ + R + F+ LS + N + ADW+G + + RPVPLE H
Sbjct: 488 EVIIML-------PRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLE-HC 539
Query: 889 QGYPGKFY 896
Y G+ Y
Sbjct: 540 LFYSGELY 547
Score = 100 (40.3 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 40/136 (29%), Positives = 64/136 (47%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
+V + A T +GKT+ AE A T+ + VY AP+K I ++ D+ GK
Sbjct: 377 SVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIKTISNQKYRDF-------CGKF 427
Query: 766 MVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AER 824
V G T D+ A +I T E S + + ++ + +I DE+H + ER
Sbjct: 428 DV---GLLTGDVSIRPEASCLIMTTEILR--SMLYRGADIIRDIEWVIFDEVHYVNDVER 482
Query: 825 GPILE-VIVSRMRYIS 839
G + E VI+ R+I+
Sbjct: 483 GVVWEEVIIMLPRHIN 498
Score = 73 (30.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 6 RMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNEL 65
R I V LSAT+PN E A ++ + + ++ RP+PL E NE+
Sbjct: 495 RHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEV 554
Query: 66 LSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLI 125
K DS ++ + V V ++ +A + ++++E + H +
Sbjct: 555 FLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSV--- 611
Query: 126 KKDVMKS 132
KDV KS
Sbjct: 612 -KDVGKS 617
Score = 42 (19.8 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1115 YLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLED 1159
Y WT L +++++N + G E E + L+R ++ DL+D
Sbjct: 1096 YYKWTNLLQKMSMNKCH-GCVKLE-EHMK--LAREIKKHKTDLKD 1136
Score = 42 (19.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 364 MLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVK 410
ML RH+N + V ++ EF + + R + Q E+ T PV ++
Sbjct: 492 MLPRHINFVLLSATVPNTFEFADWIGRTK-QKEIRVTGTTKRPVPLE 537
Score = 41 (19.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 497 LPAEILRKLEERGADLDR 514
+ EILR + RGAD+ R
Sbjct: 447 MTTEILRSMLYRGADIIR 464
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 252 QFISSLKDNLNAEVALGTVTNVKEACAWLGYT 283
+ I L ++N + TV N E W+G T
Sbjct: 488 EVIIMLPRHINFVLLSATVPNTFEFADWIGRT 519
Score = 38 (18.4 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 1205 FLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVD 1240
FL I + D+ VR ED + A SQ V+ +D
Sbjct: 1034 FLCICDSKIKIDQ--VRLLEDGNKAAFSQTVQQLLD 1067
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 196 (74.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 131 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFNNAIDCLSDEDKKLPQVEH 187
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 188 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK 247
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK-SFYKKFLYEPFPVESS 1088
YDGK R++ + +QM GRAGR D G +++V E + K+ L + + S
Sbjct: 248 YDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKKGQGDKLS 305
Query: 1089 LRDQLHDHFNAEIVSGTIFH 1108
L + +E +SG FH
Sbjct: 306 ATHALVYIYKSEQLSGVNFH 325
Score = 182 (69.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 55/171 (32%), Positives = 82/171 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVFNN L
Sbjct: 120 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAID---CLS 176
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 177 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 236
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDK 235
A TV+ + YD K W G + + GRAGR D GI+I D+
Sbjct: 237 ARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMD--DRGIVILMVDE 285
Score = 60 (26.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ V LSAT+PN + A+++ + + YRP PL Q YI
Sbjct: 21 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL-QHYI 64
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 846 VRFIGLSTALANAGDLADWL-GVGEIGLFNFKPSVRPVPLEVHI 888
V ++ LS + NA A+W+ + + RP PL+ +I
Sbjct: 21 VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYI 64
Score = 43 (20.2 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 234 DKLAYYLRLLTSQLPIESQ 252
D+L++YL L S L +SQ
Sbjct: 365 DELSFYLTLSQSSLKADSQ 383
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 181 (68.8 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 65/193 (33%), Positives = 94/193 (48%)
Query: 77 SLRQGHQAMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRN 134
S RQ + F SR + A+ L +DL E E+ H S ++K + + R
Sbjct: 571 SQRQQTPVVAFTFSRTRCDENARSLTSLDLTTSIEKSEI-----H---SFLQKSLTRLRG 622
Query: 135 KD------LI--ELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D L+ +L +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 623 GDRQLPQILLMRDLLKRGIGVHHSGILPILKEVIEMLFSRGLVKVLFATETFAMGVNMPA 682
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITS---HDKLAYYL 240
TVV + +D G+R+L G + + GRAGR D +G II+ HD +
Sbjct: 683 RTVVFDSIRKHD--GTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCKAGVHDMGELHS 740
Query: 241 RLLTSQLPIESQF 253
+L + SQF
Sbjct: 741 MMLGKPTVLHSQF 753
Score = 170 (64.9 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 59/182 (32%), Positives = 86/182 (47%)
Query: 919 PVLIFVSSRRQT-----RLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNL-RQ 972
PV+ F SR + LT+LDL E FL L+ Q+ L R
Sbjct: 577 PVVAFTFSRTRCDENARSLTSLDLTTSIEKSEI-HSFLQKSLTRLRGGDRQLPQILLMRD 635
Query: 973 TLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
L+ GIG+HH+G+ + ++E LF+ ++VL T T A GVN+PA V+ +DG
Sbjct: 636 LLKRGIGVHHSGILPILKEVIEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDG 695
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVIL----VHEPKKSFYKKFLYEPFPVESS 1088
R + P + +QM GRAGR D G +IL VH+ + + L +P + S
Sbjct: 696 TGFRNL-LP-GEYIQMAGRAGRRGLDATGTVIILCKAGVHDMGE-LHSMMLGKPTVLHSQ 752
Query: 1089 LR 1090
R
Sbjct: 753 FR 754
Score = 103 (41.3 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 42/180 (23%), Positives = 87/180 (48%)
Query: 669 PLPVTALGNNIYEALYNFSHFNPIQTQIFH---IL-YHTDNNVLLGAPTGSGKTISAELA 724
P+ +++ + Y+ + + + P + +F IL ++V + A T +GKT+ AE A
Sbjct: 294 PVDISSPCADFYKRIPDPAFKYPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYA 353
Query: 725 MLHLFNTQSDM-KVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY--TPDLMALL 781
+ +Q M + +Y +P+KA+ ++ D+K+ +G +TGD P+ L+
Sbjct: 354 IAL---SQKHMTRTIYTSPIKALSNQKFRDFKNTF-GDVGL----LTGDVQLNPEGSCLI 405
Query: 782 SADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE-VIVSRMRYIS 839
I+ S ++ ++ + +I DE+H + AERG + E V++ ++S
Sbjct: 406 MTTEILR--------SMLYNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVS 457
Score = 84 (34.6 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 26/97 (26%), Positives = 50/97 (51%)
Query: 800 WHSRNYVKKVGLMILDEIHLLG-AERGPILE-VIVSRMRYISSQTERAVRFIGLSTALAN 857
++ ++ + +I DE+H + AERG + E V++ ++S I LS + N
Sbjct: 416 YNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVS--------IILLSATVPN 467
Query: 858 AGDLADWLG-VGEIGLFNFKPSVRPVPLEVHIQGYPG 893
A + ++W+G + + ++ RPVPLE ++ Y G
Sbjct: 468 AVEFSEWIGRIKKRHIYVISTIKRPVPLEHYL--YTG 502
Score = 63 (27.2 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN +E ++++ + ++ + RP+PL + Y+
Sbjct: 456 VSIILLSATVPNAVEFSEWIGRIKKRHIYVISTIKRPVPL-EHYL 499
Score = 54 (24.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 34/127 (26%), Positives = 52/127 (40%)
Query: 364 MLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISIL 423
+L+ + D I + S +F + R Q EL+ L+ + + P H +I +L
Sbjct: 1007 VLQDSLKDFHCIHSPTFSEQFTRVQERMSVQEELDKLLFLVSDQSLTLLPEY-HQRIKVL 1065
Query: 424 IQL-YI-SRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDR 481
L Y+ S G + V A IS+ + LFE L E S +L C +
Sbjct: 1066 EALQYVDSSGAVQLKGRV--ACQISSHELLLTELLFENTLSPLAPEESAALLS-CLVFTQ 1122
Query: 482 --QIWPH 486
QI PH
Sbjct: 1123 NTQIEPH 1129
Score = 42 (19.8 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 912 CTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDET 946
C HSPT R + LD + F SD++
Sbjct: 1017 CIHSPTFSEQFTRVQERMSVQEELDKLLFLVSDQS 1051
Score = 37 (18.1 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 14/71 (19%), Positives = 32/71 (45%)
Query: 1249 VKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSG-WLSSSITC-MHL 1306
V+ + Q +L +SD L Q I++++A+ + ++ L + C +
Sbjct: 1030 VQERMSVQEELDKLLFLVSDQSLTLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQISS 1089
Query: 1307 LQMVMQGLWFE 1317
++++ L FE
Sbjct: 1090 HELLLTELLFE 1100
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 182 (69.1 bits), Expect = 8.6e-12, Sum P(4) = 8.6e-12
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 568 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 623
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 624 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 683
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 684 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 741
Query: 1087 SSLR 1090
S R
Sbjct: 742 SQFR 745
Score = 171 (65.3 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 554 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 613
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 614 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 673
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 674 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 731
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 732 MMMGKPSQLQSQF 744
Score = 99 (39.9 bits), Expect = 8.6e-12, Sum P(4) = 8.6e-12
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 689 FNP--IQTQ-IFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDM-KVVYIAPLK 744
F P Q Q I H+ H ++V + A T +GKT+ AE A+ Q M + +Y +P+K
Sbjct: 309 FEPDVFQKQAILHLERH--DSVFVAAHTSAGKTVVAEYAIAL---AQKHMTRTIYTSPIK 363
Query: 745 AIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRN 804
A+ ++ D+++ +G +TGD + A +I T E S + +
Sbjct: 364 ALSNQKFRDFRNTF-GDVGL----LTGD----VQLHPEASCLIMTTEILR--SMLYSGSD 412
Query: 805 YVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + +I DE+H + ERG + E ++
Sbjct: 413 VIRDLEWVIFDEVHYINDVERGVVWEEVL 441
Score = 84 (34.6 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 771 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG-AERGPILE 829
G T D+ A +I T E S + + ++ + +I DE+H + ERG + E
Sbjct: 381 GLLTGDVQLHPEASCLIMTTEILR--SMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWE 438
Query: 830 -VIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLG-VGEIGLFNFKPSVRPVPLEVH 887
V++ ++S I LS + NA + ADW+G + ++ RPVPLE +
Sbjct: 439 EVLIMLPDHVS--------IILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHY 490
Query: 888 I 888
+
Sbjct: 491 L 491
Score = 66 (28.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 8 IRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYI 52
+ I+ LSAT+PN LE A ++ ++ + RP+PL + Y+
Sbjct: 448 VSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPL-EHYL 491
Score = 46 (21.3 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 1001 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 1054
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 257 LKDNLNAEVALGTVTNVKEACAWLG 281
L D+++ + TV N E W+G
Sbjct: 444 LPDHVSIILLSATVPNALEFADWIG 468
Score = 37 (18.1 bits), Expect = 8.6e-12, Sum P(4) = 8.6e-12
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 659 TSHTELLDLKPLPVTALGNNI 679
T H ELL+L P ++L + +
Sbjct: 27 TGHWELLNLPGAPESSLPHGL 47
Score = 37 (18.1 bits), Expect = 8.6e-12, Sum P(4) = 8.6e-12
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 770 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 806
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 184 (69.8 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 918 KPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQN--LRQT-- 973
+PV+IF S++ AL + + + + ++ M EE + ++D++ L Q
Sbjct: 376 QPVIIFSFSKKDCEAYALQMTKLDFNTDEEKK---MVEEVFNNAIDCLSDEDKKLPQVEH 432
Query: 974 ----LQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
L+ GIG+HH GL + +E LF+ I+ L T T A G+N+PA V+
Sbjct: 433 VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSASK 492
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE 1069
+DGK R++ + +QM GRAGR D G +++V E
Sbjct: 493 FDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDE 530
Score = 178 (67.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 58/192 (30%), Positives = 91/192 (47%)
Query: 73 KVVDSL--RQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDL-----EVFNNDTHPQLSLI 125
K+V + R ++F S+KD A ++ L ++ EVFNN L
Sbjct: 365 KIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAID---CLS 421
Query: 126 KKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLP 185
+D + + ++ L +G+HH G+L + E LFSEGL+K L T T A G+N+P
Sbjct: 422 DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 481
Query: 186 AHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGEGIIITSHDKLAYYL--RL 242
A TV+ +D K W G + + GRAGR D G +I+ +K++ + +L
Sbjct: 482 ARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGI-VILMVDEKMSPTIGKQL 540
Query: 243 LTSQL-PIESQF 253
L P+ S F
Sbjct: 541 LKGSADPLNSAF 552
Score = 72 (30.4 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 37/160 (23%), Positives = 74/160 (46%)
Query: 674 ALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQS 733
ALG I + +Y F+ +++ I L NN + A SG TI+ L +
Sbjct: 116 ALGLLIKKFVYVL--FS-VRSLISFALTEVFNNYMF-ARIWSGSTITL-LKYAIALALRE 170
Query: 734 DMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKW 793
+V++ +P+KA+ ++ + + +++ MTGD T + +A ++ T E
Sbjct: 171 KQRVIFTSPIKALSNQKYREMYEEF-----QDVGLMTGDVTINP----TASCLVMTTEIL 221
Query: 794 DGISRNWHSRNYVKKVGLMILDEIHLL-GAERGPILEVIV 832
S + +++V +I DEIH + +E+G ++ +
Sbjct: 222 R--SMLYRGSEVMREVAWVIFDEIHYMRDSEKGNFEDIFI 259
Score = 43 (20.2 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 27/103 (26%), Positives = 43/103 (41%)
Query: 308 SLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQ--YSSVETYNEML 365
+L KQR + T +AL K E+ F ++G + I S + E+L
Sbjct: 167 ALREKQRVIFTSPIKALSNQKYREMYEE---FQ--DVGLMTGDVTINPTASCLVMTTEIL 221
Query: 366 RRHM-NDSEVIEMVSHSSEFENI-VVRDEEQNELETLVQTLCP 406
R + SEV+ V+ F+ I +RD E+ E + P
Sbjct: 222 RSMLYRGSEVMREVAWVI-FDEIHYMRDSEKGNFEDIFIVAIP 263
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 159 (61.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 51/182 (28%), Positives = 84/182 (46%)
Query: 919 PVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQF-- 976
P+++FV SR++ A L + E +Q + + L +D+ L Q L
Sbjct: 564 PMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQRLKG-SDKELPQVLTMRD 622
Query: 977 ----GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDG 1032
G +HH+G+ + +VE LF +++L T T A GVN+PA V+ +DG
Sbjct: 623 LCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDG 682
Query: 1033 KTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE---PKKSFYKKFLY-EPFPVESS 1088
+R ++ P + QM GRAGR D G +I+ + P+ K + + +ES
Sbjct: 683 TERRMLN-P-GEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESK 740
Query: 1089 LR 1090
R
Sbjct: 741 FR 742
Score = 159 (61.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 69/211 (32%), Positives = 100/211 (47%)
Query: 53 GISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKL--VDLARRYED 110
G + P +N L+ I Y K D L +VFV SRK + AQ L ++L E
Sbjct: 538 GRNWPGKNDKNIYLNLINYMKCSDQLPM----VVFVFSRKRCDENAQMLASMNLTTEVEK 593
Query: 111 LEV--FNNDTHPQLSLIKKDVMKSRN-KDLIELFGLAVGVHHAGMLRSDRGLTERLFSEG 167
V F + +L K++ + +DL L G AV HH+G+L + + E LF +G
Sbjct: 594 QHVRLFFSQCVQRLKGSDKELPQVLTMRDLC-LRGFAV--HHSGILPILKEVVELLFQKG 650
Query: 168 LLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLG-MLDIFGRAGRPQFDRSGE 226
+K+L T T A GVN+PA VV +D + G + GRAGR D +G
Sbjct: 651 YVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGT 710
Query: 227 GIIITSHDKLAY--YLR-LLTSQ-LPIESQF 253
III + L+ L++ Q L +ES+F
Sbjct: 711 VIIICKDSTVPQPDVLKNLISGQALRLESKF 741
Score = 95 (38.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 37/152 (24%), Positives = 71/152 (46%)
Query: 684 YNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPL 743
Y FS +P Q Q + ++ + A T +GKT+ AE A+ L + VY +P+
Sbjct: 289 YPFS-LDPFQ-QSSVLCMERGESLFVAAHTSAGKTVVAEYAIA-LCQAHKT-RAVYTSPI 344
Query: 744 KAIVRERMNDWKDRLVSQLGKEMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWH 801
KA+ ++ D+K ++ +G +TGD P+ L+ I+ S ++
Sbjct: 345 KALSNQKFRDFK-QIFGDVGL----VTGDIQLHPEAACLIMTTEILR--------SMLYN 391
Query: 802 SRNYVKKVGLMILDEIHLLG-AERGPILEVIV 832
++ + ++ DE+H + ERG + E ++
Sbjct: 392 GSEVIRDLEWVVFDEVHYINNEERGHVWEEVL 423
Score = 82 (33.9 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 758 LVSQLGKEMVEMTGDY---TPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMIL 814
L +Q ++ ++ GD T D+ A +I T E + N ++ + ++
Sbjct: 347 LSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYN--GSEVIRDLEWVVF 404
Query: 815 DEIHLLG-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLF 873
DE+H + ERG + E ++ + V+ + LS + N + ADW+G +
Sbjct: 405 DEVHYINNEERGHVWEEVLIML-------PAHVKIVMLSATVPNCVEFADWVGRIKNRKI 457
Query: 874 N-FKPSVRPVPLEVHIQ-GYPGK 894
N RPVPLE + G GK
Sbjct: 458 NVISTDRRPVPLEHFLYTGQDGK 480
Score = 63 (27.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 8 IRIVGLSATLPNYLEVAQFL-RV-NPEMGLFFFDSSYRPIPL 47
++IV LSAT+PN +E A ++ R+ N ++ + D RP+PL
Sbjct: 430 VKIVMLSATVPNCVEFADWVGRIKNRKINVISTDR--RPVPL 469
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 877 PSVRPVPLEVHIQGYPGKFY--CPRMNSMNKP--AYAAICTHSPTKPVLI-FVSSRR 928
P P+P + Q +FY ++S+ +P A A I + +I FV + R
Sbjct: 21 PPCAPIPFHITKQNPSAEFYNVADNLDSLLQPIDAPANIIAQVDSNGKIIGFVENER 77
>UNIPROTKB|Q5H9U9 [details] [associations]
symbol:DDX60L "Probable ATP-dependent RNA helicase
DDX60-like" species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 HOGENOM:HOG000169263 HOVERGEN:HBG107797
EMBL:AL832950 EMBL:CR933601 EMBL:AC079926 EMBL:AC093888
EMBL:AK055595 IPI:IPI00853133 IPI:IPI00935252 RefSeq:NP_001012985.1
UniGene:Hs.535011 ProteinModelPortal:Q5H9U9 STRING:Q5H9U9
PhosphoSite:Q5H9U9 DMDM:74755482 PaxDb:Q5H9U9 PRIDE:Q5H9U9
Ensembl:ENST00000260184 Ensembl:ENST00000505890
Ensembl:ENST00000511577 GeneID:91351 KEGG:hsa:91351 UCSC:uc003irq.4
CTD:91351 GeneCards:GC04M169277 HGNC:HGNC:26429 HPA:HPA043211
neXtProt:NX_Q5H9U9 PharmGKB:PA162383445 InParanoid:Q5H9U9
OMA:AQDSVYL GenomeRNAi:91351 NextBio:77184 ArrayExpress:Q5H9U9
Bgee:Q5H9U9 CleanEx:HS_DDX60L Genevestigator:Q5H9U9 Uniprot:Q5H9U9
Length = 1706
Score = 144 (55.7 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 48/179 (26%), Positives = 90/179 (50%)
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVV-YIAPLKAIVR 748
N Q ++ ++ ++ V++ APT SGKT ++ M + +SD+ VV Y+AP K++V
Sbjct: 745 NAWQQELLDVVDKNESAVIV-APTSSGKTYASYYCMEKVLR-ESDVGVVVYVAPAKSLVG 802
Query: 749 ERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA-LLSADIIISTPEKWDGISRNWHSRNYVK 807
+ ++R L + G +T D +L+ ++I+ PE ++ + H + +V+
Sbjct: 803 QVAATVENRFTKTLPAGRT-LCGAFTRDYCHNVLNCQVLITVPECFEILLLAPHRQKWVE 861
Query: 808 KVGLMILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
++ +I DE+H LG E G E+++ +R F+ LS + N L WL
Sbjct: 862 RIRYVIFDEVHYLGREVGAKFWELLLVIIR---------CPFLVLSATINNPNLLTKWL 911
Score = 121 (47.7 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 955 EEDLQMVLSQVT----DQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTST 1010
+ L+ VL +V + L+ Q GIG HH+ + K++ VE LF I+V+ T T
Sbjct: 1218 DSTLERVLPRVRFTRHGKELKALAQRGIGYHHSSMYFKEKEFVEILFVKGLIRVVTATET 1277
Query: 1011 LAWGVNLPAHLVII-KGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHG 1061
LA G+++P V+ + + Y D R QM GRAGR D G
Sbjct: 1278 LALGIHMPCKSVVFAQDSVYLDALNYR----------QMSGRAGRRGQDLLG 1319
Score = 37 (18.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 59 FAARNELLSEICYKKVVDSLRQGHQAMVFVH 89
F+ NE + + YK ++ L + ++ H
Sbjct: 199 FSKENETVIQSAYKSLIQHLEEIRVLVLATH 229
>ASPGD|ASPL0000001605 [details] [associations]
symbol:AN10757 species:162425 "Emericella nidulans"
[GO:0035861 "site of double-strand break" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000405 "bubble DNA binding"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000733 "DNA strand renaturation" evidence=IEA] [GO:1901255
"nucleotide-excision repair involved in interstrand cross-link
repair" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=IEA] [GO:0070914 "UV-damage excision repair" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:BN001301 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014939 SMART:SM01075 OMA:DELHVYK
InterPro:IPR018973 Pfam:PF09369 ProteinModelPortal:C8V3J7
EnsemblFungi:CADANIAT00007106 Uniprot:C8V3J7
Length = 1210
Score = 185 (70.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 63/218 (28%), Positives = 106/218 (48%)
Query: 674 ALGNNIYEALYN---FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFN 730
AL ++ ALYN + F Q + + L H NV++ T SGK++ ++ MLH
Sbjct: 382 ALSQDLVNALYNTKGITRFYSHQAEAINHL-HDGKNVIVSTSTSSGKSLIYQVPMLHELE 440
Query: 731 TQSDMKVVYIAPLKAIVRERMNDWKDRL--VSQLGKEMVE-MTGDYTPDLMALLSAD--- 784
SD + +YI P KA+ +++ ++ L ++ L MVE GD TP L D
Sbjct: 441 QDSDSRGMYIFPTKALAQDQKRSMQELLQYLNSLQGTMVETFDGD-TPMANRNLIRDEAR 499
Query: 785 IIISTPEKWDGISRNWHS--RNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQT 842
II + P+ S R +++ + +++DE+H+ G + +I+ R+R I +
Sbjct: 500 IIFTNPDMLHITILPQESSWRTFLQNLKFVVVDELHVYNGLFGSHVALIMRRLRRICAAV 559
Query: 843 -ERAVRFIGLSTALANAGD-LADWLGVGEIGLFNFKPS 878
R VRFI S +AN + + GV ++ L +F S
Sbjct: 560 GNRHVRFISCSATVANPEEHMRAIFGVDDVQLIDFDGS 597
Score = 60 (26.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 981 HHAGLNDKDRSLVE-ELFANNKIQVLVCTSTLAWGVNLPA-HLVIIKGTEYYDGKTKRYV 1038
+ G + +DR +E E+F + + V T+ L GV++ + VI G Y
Sbjct: 678 YRGGYSPQDRRRIEAEMFQGQLLGI-VATNALELGVDIGSLDAVITLGFPY--------- 727
Query: 1039 DFPITDILQMMGRAGRPQYDQHGKAVILVHE--PKKSFYKK 1077
I+++ Q GRAGR D IL+ E P FY +
Sbjct: 728 --SISNLRQQSGRAGRRNKDSLS---ILIGERYPTDQFYMR 763
>POMBASE|SPAC694.02 [details] [associations]
symbol:SPAC694.02 "DEAD/DEAH box helicase" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC694.02
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:T50247 RefSeq:NP_594482.1
ProteinModelPortal:Q9P7T8 PRIDE:Q9P7T8 EnsemblFungi:SPAC694.02.1
GeneID:2543333 KEGG:spo:SPAC694.02 HOGENOM:HOG000194492 OMA:HTRDYRI
OrthoDB:EOG4S4SQ7 NextBio:20804349 Uniprot:Q9P7T8
Length = 1717
Score = 143 (55.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/111 (38%), Positives = 58/111 (52%)
Query: 145 VGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGW 204
+G+HH+G+ R R + E LF G L V++ T TL+ G+N+P TVV G L
Sbjct: 1225 IGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFLGDSLQ------L 1278
Query: 205 RDLGMLDIFGRAGRPQFDRSGE-GIIITSHDKLAYYLRLLTSQL-PIESQF 253
L GRAGR FD G G + K+ Y RLLT++L I+ QF
Sbjct: 1279 NALNFHQAAGRAGRRGFDLLGHVGFLGVPLHKI-Y--RLLTTKLWDIQGQF 1326
Score = 140 (54.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 977 GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKR 1036
GIG+HH+GLN + R +VE LF ++ V++ T TL+ G+N+P V+ G D
Sbjct: 1224 GIGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFLG----DSLQLN 1279
Query: 1037 YVDFPITDILQMMGRAGRPQYDQHGKAVIL---VHEPKKSFYKKF--LYEPFPVESSLRD 1091
++F Q GRAGR +D G L +H+ + K + FP+ +SL
Sbjct: 1280 ALNFH-----QAAGRAGRRGFDLLGHVGFLGVPLHKIYRLLTTKLWDIQGQFPLTTSLVL 1334
Query: 1092 QLHDHFNAEIVSGTIF--HKEDAVHYL 1116
QL ++++SG+ D +H L
Sbjct: 1335 QL-----SQLISGSQAGPFARDTIHAL 1356
Score = 107 (42.7 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 37/140 (26%), Positives = 60/140 (42%)
Query: 693 QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMN 752
Q + IL D +V + APT SGKT + AM + D V+Y+AP KA+V +
Sbjct: 740 QRETLDIL-DRDESVFVVAPTSSGKTFISFYAMEKVLRDNDDGVVIYVAPTKALVNQLSA 798
Query: 753 DWKDRLVSQLGKEMVEMTGDYTPD--LMALLSADIIISTPEKWDGISRNWHSRN-YVKKV 809
+ R + YT D + + ++I+ P + N + K+
Sbjct: 799 EVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVLITVPHVLQSMLLQPALANAWCPKI 858
Query: 810 GLMILDEIHLLGAERGPILE 829
+I DEIH +G ++E
Sbjct: 859 RRIIFDEIHCIGQMEDGLVE 878
Score = 47 (21.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 600 LFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQART 659
++ L K +AR ++ +L+F + F+ Y + D LHA + F +A+ R
Sbjct: 59 IYLLEKELARFKSARLNFCIVFFKNWEALY---SQYDGILHASL---LLFRRVAIRHLR- 111
Query: 660 SHTELLDLKPL 670
H + K L
Sbjct: 112 KHVPVYVFKSL 122
>UNIPROTKB|I3L8F4 [details] [associations]
symbol:I3L8F4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026 EMBL:CU468078
Ensembl:ENSSSCT00000025178 OMA:CCILEIY Uniprot:I3L8F4
Length = 115
Score = 150 (57.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 690 NPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNT--------QSDMKVVYIA 741
N IQ+ +F Y+T+ N+L+ APTG+GKT A L +LH +++ K+VY+A
Sbjct: 5 NRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVA 64
Query: 742 PLKAIVRERMNDWKDRLVSQLGKEMVEMTGD 772
P+KA+ E N + RL LG + E+TGD
Sbjct: 65 PMKALAAEMTNYFSKRL-EPLGIVVKELTGD 94
>DICTYBASE|DDB_G0278827 [details] [associations]
symbol:DDB_G0278827 "Probable ATP-dependent RNA
helicase DDX60" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278827 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AAFI02000024 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 RefSeq:XP_641993.1
ProteinModelPortal:Q54XN7 EnsemblProtists:DDB0206223 GeneID:8621725
KEGG:ddi:DDB_G0278827 InParanoid:Q54XN7 OMA:RESALIC Uniprot:Q54XN7
Length = 1816
Score = 136 (52.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 46/132 (34%), Positives = 58/132 (43%)
Query: 941 AASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANN 1000
A+ D QF + D+ +V L L GI HH G + VE LF +
Sbjct: 1235 ASLDYLKPQFGNLLSSDID---EKVKKDPLAPALTQGIAAHHGGCDKNYLRNVEYLFRSK 1291
Query: 1001 KIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQH 1060
KIQV+ TSTLA GVN PA + G Y + Q GRAGR +D +
Sbjct: 1292 KIQVVFATSTLAVGVNAPAKSSVFLGDSPY---------LNVLTSKQCAGRAGRRGFDNY 1342
Query: 1061 GKAVILVHEPKK 1072
G VI V PK+
Sbjct: 1343 GN-VIFVGLPKQ 1353
Score = 100 (40.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 48/208 (23%), Positives = 89/208 (42%)
Query: 667 LKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDN--NVLLGAPTGSGKTISAELA 724
LK P T + N HF P Q+ +L D + L+ A T SGKT +
Sbjct: 794 LKHSPDTLIRNTGSVEDSRVRHFKPDAWQV-ELLDIVDKRESALICASTSSGKTFISFYC 852
Query: 725 MLHLFNTQSDMKVVYIAPLKAIVRERMNDWK---DRLVSQLGKEMV--EMTGDYTPDL-M 778
+ +D VV++ P KA+V + + D+ + +M G +T D +
Sbjct: 853 FEQILKESNDGIVVFVCPTKALVNQMYAEVLGRYDKNYQAINHRPSNHKMVGVFTRDFRL 912
Query: 779 ALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAE-RGPILEVIVSRMRY 837
+ + I+I+ P+ + + + + +++++ +I DE+H + + G I E R+
Sbjct: 913 NIETCQILITVPQCLEILFLSIMNTHFIQRCRYIIFDEVHQIASSVDGAIWE----RLLV 968
Query: 838 ISSQTERAVRFIGLSTALANAGDLADWL 865
+ F+ LS L N D ++L
Sbjct: 969 FNPAP-----FLALSATLGNLTDFHNFL 991
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 182 (69.1 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 919 PVLIFVSSR-----RQTRLTALDLIQFAASDET----PRQFLGMPEEDLQMVLSQVTDQN 969
PV++F SR + + LT+LDL + E R + D Q L QV +
Sbjct: 202 PVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQ--LPQVL--H 257
Query: 970 LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEY 1029
+ + L G+G+HH+G+ + +VE LF+ ++VL T T A GVN+PA V+
Sbjct: 258 MSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRK 317
Query: 1030 YDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV--HEPKKS-FYKKFLYEPFPVE 1086
+DG T R D + +QM GRAGR D G ++L P+ + ++ + +P ++
Sbjct: 318 HDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQ 375
Query: 1087 SSLR 1090
S R
Sbjct: 376 SQFR 379
Score = 171 (65.3 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 63/193 (32%), Positives = 93/193 (48%)
Query: 71 YKKVVDSLRQGHQ--AMVFVHSRKDTVKTAQKL--VDLARRYEDLEVFNNDTHPQLSLIK 126
Y ++ SLR Q +VF SR + A L +DL E E+ L
Sbjct: 188 YLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRG 247
Query: 127 KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA 186
D + + EL +GVHH+G+L + + E LFS GL+KVL T T A GVN+PA
Sbjct: 248 SDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPA 307
Query: 187 HTVVIKGTQLYDPKAGGWRDL--G-MLDIFGRAGRPQFDRSGEGIIITSH--DKLAYYLR 241
TVV + +D +RDL G + + GRAGR D +G I++ ++A R
Sbjct: 308 RTVVFDSMRKHDGST--FRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHR 365
Query: 242 LLTSQ-LPIESQF 253
++ + ++SQF
Sbjct: 366 MMMGKPSQLQSQF 378
Score = 46 (21.3 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 899 RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE 955
R + + A C HSP P R ++ ++F SD++ L +PE
Sbjct: 635 RARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQS---LLLLPE 688
Score = 37 (18.1 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 659 TSHTELLDLKPLPVTALGNNI 679
T H ELL+L P ++L + +
Sbjct: 27 TGHWELLNLPGAPESSLPHGL 47
Score = 37 (18.1 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1215 YDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLL 1254
+ E P R + H +AL++ + L++P + L+
Sbjct: 404 FSEFPSRKDSKAHEQALAELTKRL---GALEEPDMTGQLV 440
>UNIPROTKB|G4MUH1 [details] [associations]
symbol:MGG_07250 "DEAD/DEAH box helicase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM001232
GO:GO:0008026 RefSeq:XP_003715470.1 EnsemblFungi:MGG_07250T0
GeneID:2682996 KEGG:mgr:MGG_07250 Uniprot:G4MUH1
Length = 1771
Score = 150 (57.9 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 44/118 (37%), Positives = 59/118 (50%)
Query: 138 IELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLY 197
IE VGVHHAGM R R + E L G L V++ T TLA G+N+P TVV ++
Sbjct: 1210 IEALRRGVGVHHAGMNRKYRQVVEMLCRRGFLTVVIATGTLALGINVPCKTVVFSEDSVF 1269
Query: 198 DPKAGGWRDLGMLDIFGRAGRPQFDRSGEGII-ITSHDKLAYYLRLLTSQLP-IESQF 253
A +R GRAGR FD G + I +H +++S+LP + QF
Sbjct: 1270 -LSALNYRQAS-----GRAGRRGFDLLGNVVFNIPTHRSF----EIMSSRLPDLRGQF 1317
Score = 135 (52.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 47/161 (29%), Positives = 73/161 (45%)
Query: 937 LIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLR----QTLQFGIGLHHAGLNDKDRSL 992
L +F+ SD Q EDL+ ++ + NL + L+ G+G+HHAG+N K R +
Sbjct: 1177 LAKFSFSDSRKCQ-----REDLEELIRSLNWVNLDPVFIEALRRGVGVHHAGMNRKYRQV 1231
Query: 993 VEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRA 1052
VE L + V++ T TLA G+N+P V+ + + Q GRA
Sbjct: 1232 VEMLCRRGFLTVVIATGTLALGINVPCKTVVFSEDSVF---------LSALNYRQASGRA 1282
Query: 1053 GRPQYDQHGKAV--ILVHEPKKSFYKKF--LYEPFPVESSL 1089
GR +D G V I H + + L FPV +++
Sbjct: 1283 GRRGFDLLGNVVFNIPTHRSFEIMSSRLPDLRGQFPVSTTI 1323
Score = 91 (37.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 36/156 (23%), Positives = 71/156 (45%)
Query: 687 SHFNPI--QTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLK 744
S FNP Q ++ + ++ + APT +GKT + AM + + + +VY+AP K
Sbjct: 711 SSFNPDAWQRKVLDAI-DAKKSLCVIAPTSAGKTFISFYAMKKVMQSSDNDVLVYVAPTK 769
Query: 745 AIVRERMNDWKDRLVSQLG-KEMVEMTGDYTPDLMAL--LSADIIISTPEKWDGI---SR 798
A+V + + + R + +E + +T D I+++ P +
Sbjct: 770 ALVNQIAAEVQGRFKKKFRYEESRSVWAIHTRDYRVNNPTGCQILVTVPHILQIMLLSPP 829
Query: 799 NWHSRN-YVKKVGLMILDEIHLLG-AERGPILEVIV 832
N N + ++ +I DE+H +G A+ G + E ++
Sbjct: 830 NVEKANSWAHRIKRIIFDEVHCIGQAQEGVVWEQLL 865
Score = 44 (20.5 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 1263 DLPISDYVTDLK---SVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQD 1319
+LP S Y + S + Q+ + + A SG+ S + L Q V +G++ E+
Sbjct: 1510 ELPFSKYPAGSQGSGSHVSQTRKAPEIRSPFAALSGFTDSFNSIQELCQTVREGVFLEES 1569
Query: 1320 S 1320
+
Sbjct: 1570 A 1570
Score = 42 (19.8 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 62 RNELLSEICYKKVVD-SLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYE 109
+ E LS ++ ++D RQG A++F + R + ++ +R+E
Sbjct: 1058 KGEQLSPEHFQLLLDLHQRQGLPAIIFNYDRMKCESIMKSVISELKRHE 1106
>RGD|1561120 [details] [associations]
symbol:Snrnp200 "small nuclear ribonucleoprotein 200 (U5)"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005682 "U5
snRNP" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1561120
GO:GO:0008380 GO:GO:0005682 GO:GO:0071013 InterPro:IPR004179
Pfam:PF02889 eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0008026
IPI:IPI00562876 EMBL:BC099211 UniGene:Rn.76239
ProteinModelPortal:Q4KLH1 SMR:Q4KLH1 IntAct:Q4KLH1 STRING:Q4KLH1
UCSC:RGD:1561120 InParanoid:Q4KLH1 ArrayExpress:Q4KLH1
Genevestigator:Q4KLH1 Uniprot:Q4KLH1
Length = 151
Score = 131 (51.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/119 (21%), Positives = 62/119 (52%)
Query: 1373 RFPRIQVKLRLQRRD-IDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGN 1431
R+P I++ + +D I + + +++++ + T A FP+ ++E WW+V+G+
Sbjct: 28 RYPNIELSYEVVDKDSIRSGGPVVVLVQLEREE--EVTGPVIAPLFPQKREEGWWVVIGD 85
Query: 1432 TNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS 1490
++ L ++KR++ + ++ + T L +SD Y+G +QE+ V+++
Sbjct: 86 AKSNSLISIKRLTLQQKAKVKLDFVAPATGGHNYTLYFMSDAYMGCDQEYKFSVDVKEA 144
>UNIPROTKB|P96901 [details] [associations]
symbol:lhr "PROBABLE ATP-DEPENDENT HELICASE LHR (LARGE
HELICASE-RELATED PROTEIN)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0005618 "cell wall" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
InterPro:IPR013701 Pfam:PF00270 Pfam:PF00271 Pfam:PF08494
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005618 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0003676 EMBL:BX842582 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000238716 KO:K03724
OMA:PRLVWDR EMBL:CP003248 PIR:A70982 RefSeq:NP_217813.1
RefSeq:NP_337924.1 RefSeq:YP_006516773.1
EnsemblBacteria:EBMYCT00000002553 EnsemblBacteria:EBMYCT00000072323
GeneID:13318119 GeneID:887503 GeneID:926649 KEGG:mtc:MT3395
KEGG:mtu:Rv3296 KEGG:mtv:RVBD_3296 PATRIC:18129218
TubercuList:Rv3296 ProtClustDB:CLSK792412 Uniprot:P96901
Length = 1513
Score = 140 (54.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 82/314 (26%), Positives = 143/314 (45%)
Query: 736 KVVYIAPLKAIVRERMNDWKD------RLVSQLGKEMVEM-----TGDYTPDLMALLSA- 783
+V+Y++PLKA+ + + + RL + G ++ +GD P L L +
Sbjct: 80 RVLYVSPLKALAVDVERNLRTPLAGLTRLAERQGLPAPQIRVGVRSGDTPPALRRQLVSQ 139
Query: 784 --DIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGA-ERGPILEVIVSRMRYISS 840
D++I+TPE + +R + V +I+DEIH + A +RG L + + R+ +SS
Sbjct: 140 PPDVLITTPESLF-LMLTSAARQTLTGVQTVIIDEIHAIAATKRGAHLALSLERLDDLSS 198
Query: 841 QTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM 900
+ RA R IGLS + +LA +L P+ + V L V + P
Sbjct: 199 R-RRAQR-IGLSATVRPPEELARFLSGQSPTTIVAPPAAKTVELSVQVP-VPDMANLTD- 254
Query: 901 NSMNKPAYAAIC----THSPTKPVLIFVSSRRQT-RLTALDLIQFAASDETPRQFLGMPE 955
N++ A + +H+ T ++F +SRR RLTA L + A+ R + +
Sbjct: 255 NTIWPDVEARLVDLIESHNST---IVFANSRRLAERLTAR-LNEIHAA----RCGIELAP 306
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIG-----LHHAGLNDKDRSLVEELFANNKIQVLVCTST 1010
+ Q V + FG HH ++ + R++VEE +++ +V TS+
Sbjct: 307 DTNQQVAGGAPAHIMGSGQTFGAPPVLARAHHGSISKEQRAVVEEDLKRGQLKAVVATSS 366
Query: 1011 LAWGVNLPA-HLVI 1023
L G+++ A LVI
Sbjct: 367 LELGIDMGAVDLVI 380
Score = 74 (31.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 705 NNVLLGAPTGSGKTISAELAMLHLFNTQSDM-------KVVYIAPLKAI 746
+N L+ APTGSGKT++A L L M +V+Y++PLKA+
Sbjct: 42 DNTLVIAPTGSGKTLAAFLWALDSLAGSEPMSERPAATRVLYVSPLKAL 90
>UNIPROTKB|F1RIW4 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900246 "positive regulation of RIG-I signaling
pathway" evidence=IEA] [GO:1900245 "positive regulation of MDA-5
signaling pathway" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0003727 GO:GO:0051607
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 OMA:QDCTYAD GO:GO:1900245 GO:GO:1900246
GeneTree:ENSGT00690000102154 EMBL:AEMK01191618 EMBL:CU469408
Ensembl:ENSSSCT00000010657 Uniprot:F1RIW4
Length = 1705
Score = 130 (50.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 977 GIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKR 1036
G+G HH+ LN K++ LVE LF I+V+ T TLA G+N+P V+ +
Sbjct: 1253 GVGYHHSSLNFKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVF-------AQNSI 1305
Query: 1037 YVDFPITDILQMMGRAGRPQYDQHG 1061
Y+D + QM GRAGR D G
Sbjct: 1306 YLD--ALNYRQMSGRAGRRGQDLLG 1328
Score = 99 (39.9 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 36/137 (26%), Positives = 68/137 (49%)
Query: 733 SDMKVVYIAPLKAIVRERMNDWKDRLVSQL--GKEMVEM-TGDYTPDLMALLSADIIIST 789
+ + +VY+ +A+V + ++R L G+ + + T DY D L++ I+I+
Sbjct: 801 TSITLVYVLINQALVNQVAATVQNRFRKNLPDGEALCGVFTRDYRHDA---LNSQILITV 857
Query: 790 PEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGP-ILEVIVSRMRYISSQTERAVRF 848
P ++ + H + +VK++ +I DE+H LG E G I E ++ +R F
Sbjct: 858 PACFEILLLAPHRQAWVKRIRYVIFDEVHCLGGEIGAEIWEHLLVMIR---------CPF 908
Query: 849 IGLSTALANAGDLADWL 865
+ LS ++N L +WL
Sbjct: 909 LALSATISNPEHLTEWL 925
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 223 RSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVAL---GTVTNVKEACAW 279
+ G+ +++ D Y L LP+ + I L+ N N +V G ++ EA
Sbjct: 77 KGGQFAVVSLSDAENTYFNL-PELLPLRTALILHLQHNTNIDVRTDFSGCLSQEWEAFLE 135
Query: 280 LGYTYLSI 287
Y Y I
Sbjct: 136 ESYPYFLI 143
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 355 YSSVETYNEMLRRHMNDSEVIEMVSHSSEFENI 387
YS VE Y E+L+ D +VI FE +
Sbjct: 671 YSVVEKYPELLQEA--DRQVIAKCLRYLGFEEL 701
>UNIPROTKB|C9JAQ9 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 InterPro:IPR004179 Pfam:PF02889
HOGENOM:HOG000157749 GO:GO:0008026 EMBL:AC021188 HGNC:HGNC:30859
ChiTaRS:SNRNP200 IPI:IPI01018841 ProteinModelPortal:C9JAQ9
SMR:C9JAQ9 STRING:C9JAQ9 Ensembl:ENST00000349783
ArrayExpress:C9JAQ9 Bgee:C9JAQ9 Uniprot:C9JAQ9
Length = 625
Score = 131 (51.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +LL ++ LP A +E F N IQ++++ TD N+L
Sbjct: 446 HVPALKPKPFGSEEQLLPVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALETDENLL 500
Query: 709 LGAPTGSGKTISAELAML-----HL-----FNTQSDMKVVYIAPLKAIVRERMNDWKDR 757
L APTG+GKT A + ML H+ N D K++YIAP++++V+E + + R
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVD-DFKIIYIAPMRSLVQEMVGSFGKR 558
Score = 65 (27.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 12/60 (20%), Positives = 30/60 (50%)
Query: 1431 NTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS 1490
+ ++ L ++KR++ + ++ + T L +SD Y+G +QE+ V+++
Sbjct: 559 DAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEA 618
>UNIPROTKB|P30015 [details] [associations]
symbol:lhr "member of ATP-dependent helicase superfamily
II" species:83333 "Escherichia coli K-12" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 InterPro:IPR013701
Pfam:PF00270 Pfam:PF00271 Pfam:PF08494 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:L01622 PIR:G64922 RefSeq:NP_416170.1 RefSeq:YP_489917.1
ProteinModelPortal:P30015 SMR:P30015 DIP:DIP-10097N IntAct:P30015
MINT:MINT-1293547 PaxDb:P30015 PRIDE:P30015
EnsemblBacteria:EBESCT00000003531 EnsemblBacteria:EBESCT00000018334
GeneID:12931274 GeneID:946156 KEGG:ecj:Y75_p1630 KEGG:eco:b1653
PATRIC:32118608 EchoBASE:EB1510 EcoGene:EG11548 eggNOG:COG1201
HOGENOM:HOG000238716 KO:K03724 OMA:PRLVWDR ProtClustDB:PRK09751
BioCyc:EcoCyc:EG11548-MONOMER BioCyc:ECOL316407:JW1645-MONOMER
Genevestigator:P30015 Uniprot:P30015
Length = 1538
Score = 124 (48.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 74/304 (24%), Positives = 142/304 (46%)
Query: 742 PLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSA---DIIISTPEKWDGISR 798
PLK I ER + + ++G TGD + L+ DI+I+TPE +
Sbjct: 108 PLKGIADERRRRGETEVNLRVGIR----TGDTPAQERSKLTRNPPDILITTPESLY-LML 162
Query: 799 NWHSRNYVKKVGLMILDEIHLL-GAERGPILEVIVSRMRYISSQTERAVRFIGLSTALAN 857
+R ++ V +I+DE+H + G++RG L + + R+ + + + IGLS + +
Sbjct: 163 TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRS 219
Query: 858 AGDLADWLGVGE--IGLFNFKPSVR-P-----VPL----EVH-IQGYPGK-FYCPRMNSM 903
A D+A +LG G+ + + N P++R P VP+ +V + G+ + R S+
Sbjct: 220 ASDVAAFLG-GDRPVTVVN-PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277
Query: 904 NKPAYAAICTHSPT-KPVLIFVSSRRQT-RLTA-LDLIQFAASDETPRQFLGMPEEDLQM 960
I + ++F +SR +LTA L+ + A +P + + +
Sbjct: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS--IAVDAAHFES 335
Query: 961 VLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA- 1019
S T ++ + F HH ++ + R++ E+ + +++ +V TS+L G+++ A
Sbjct: 336 T-SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394
Query: 1020 HLVI 1023
LVI
Sbjct: 395 DLVI 398
Score = 81 (33.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 686 FSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAEL-AMLHLF-----NTQSDMK--- 736
F +Q Q +H+ +++ +++ APTGSGKT++A L A+ LF +T+ K
Sbjct: 27 FKQPTAVQPQTWHVAARSEHALVI-APTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85
Query: 737 --VVYIAPLKAI 746
++YI+P+KA+
Sbjct: 86 SRILYISPIKAL 97
>UNIPROTKB|E3W982 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC096768 HGNC:HGNC:18536 IPI:IPI00965450
ProteinModelPortal:E3W982 SMR:E3W982 Ensembl:ENST00000508591
UCSC:uc003hon.1 ArrayExpress:E3W982 Bgee:E3W982 Uniprot:E3W982
Length = 489
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/139 (29%), Positives = 71/139 (51%)
Query: 706 NVLLGAPTGSGKTISAELAMLH-LFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGK 764
N++ PT GKT+ AE+ ML L + D V+ I P AIV+E+++ + +LG
Sbjct: 354 NLIYSLPTSGGKTLVAEILMLQELLCCRKD--VLMILPYVAIVQEKISGLSSFGI-ELGF 410
Query: 765 EMVEMTGDYT--PDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLG- 821
+ E G P + I+T EK + + + +GL+++DE+H++G
Sbjct: 411 FVEEYAGSKGRFPPTKRREKKSLYIATIEKGHSLVNSLIETGRIDSLGLVVVDELHMIGE 470
Query: 822 AERGPILEVIVSRMRYISS 840
RG LE+ ++++ Y SS
Sbjct: 471 GSRGATLEMTLAKILYTSS 489
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 39/191 (20%), Positives = 85/191 (44%)
Query: 661 HTELLDLKPLPVTALGNNIYEALYNFSHFNP--IQTQIFHILYHTD-NNVLLGAPTGSGK 717
++ L K L + + +Y P IQ + +L H N++ + +G+GK
Sbjct: 85 NSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGK 144
Query: 718 TISAELAMLHLFNTQ-SDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDY-TP 775
T + L ML N + + + + +AP + + R+ + +V ++GK ++T P
Sbjct: 145 TAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLE-----VVQEMGK-FTKITSQLIVP 198
Query: 776 DLMAL---LSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIV 832
D ++A +I+ TP + R ++K+ + +LDE + ++G + + +
Sbjct: 199 DSFEKNKQINAQVIVGTPGTVLDLMRR--KLMQLQKIKIFVLDEADNMLDQQG-LGDQCI 255
Query: 833 SRMRYISSQTE 843
R++ T+
Sbjct: 256 RVKRFLPKDTQ 266
Score = 88 (36.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 978 IGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRY 1037
+ + H L ++R + + F + +VL+ T+ LA G+++P +++ YD T
Sbjct: 357 VSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVN----YDLPTLAN 412
Query: 1038 VDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSF 1074
+ +GR GR + + G A+ VH+ K SF
Sbjct: 413 GQADPATYIHRIGRTGR--FGRKGVAISFVHD-KNSF 446
>SGD|S000002699 [details] [associations]
symbol:HRQ1 "3'-5'DNA helicase that has DNA strand annealing
activity" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA
helicase activity" evidence=IDA] [GO:0000733 "DNA strand
renaturation" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000002699 GO:GO:0005524 GO:GO:0005634
GO:GO:0006950 EMBL:BK006938 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000733
EMBL:U51031 RefSeq:NP_010581.3 GeneID:851889 KEGG:sce:YDR295C
eggNOG:COG1205 HOGENOM:HOG000163591 OrthoDB:EOG4BVW2R
InterPro:IPR018973 Pfam:PF09369 PIR:S70120 RefSeq:NP_010577.3
ProteinModelPortal:Q05549 SMR:Q05549 MINT:MINT-2493111
STRING:Q05549 PaxDb:Q05549 EnsemblFungi:YDR291W GeneID:851885
KEGG:sce:YDR291W CYGD:YDR291w KO:K06877 OMA:CKENSLV NextBio:969859
Genevestigator:Q05549 GermOnline:YDR291W Uniprot:Q05549
Length = 1077
Score = 140 (54.3 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 51/211 (24%), Positives = 103/211 (48%)
Query: 675 LGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSD 734
L +Y+ + + +F Q + L H NV++ T SGK++ +LA + L +
Sbjct: 278 LAPEVYQGMEH-ENFYSHQADAINSL-HQGENVIITTSTSSGKSLIYQLAAIDLLLKDPE 335
Query: 735 MKVVYIAPLKAIVRERMNDWKDRL--VSQLGKEMVEM-TGDYTPDLMALL--SADIIIST 789
+YI P KA+ +++ +K L + +L +V+ GD P+ A + +A +I +
Sbjct: 336 STFMYIFPTKALAQDQKRAFKVILSKIPELKNAVVDTYDGDTEPEERAYIRKNARVIFTN 395
Query: 790 PEK-WDGISRNWHS--RNYVKKVGLMILDEIHLLGAERGPILEVIVSRM-RYISSQTERA 845
P+ I N H+ R+++ + L+++DE+H+ G + +++ R+ R E +
Sbjct: 396 PDMIHTSILPN-HANWRHFLYHLKLVVVDELHIYKGLFGSHVALVMRRLLRLCHCFYENS 454
Query: 846 -VRFIGLSTALAN-AGDLADWLGVGEIGLFN 874
++FI S L + + D G+ E+ L +
Sbjct: 455 GLQFISCSATLKSPVQHMKDMFGINEVTLIH 485
Score = 50 (22.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 34/142 (23%), Positives = 58/142 (40%)
Query: 971 RQTLQFGIGLHHAGLNDKDRSLVE-ELFANNKIQVLVCTSTLAWGVNLPA-HLVIIKGTE 1028
R+ L + + G + DR +E E+F N ++ ++ T+ L G+++ V++ G
Sbjct: 558 REDLVTEVMSYRGGYSASDRRKIEREMFHGN-LKAVISTNALELGIDIGGLDAVLMCG-- 614
Query: 1029 YYDGKTKRYVDFPIT--DILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVE 1086
FP++ + Q GRAGR D V+ P Y V
Sbjct: 615 -----------FPLSMANFHQQSGRAGRRNNDSL-TLVVASDSPVDQHYVAHPESLLEVN 662
Query: 1087 S--SLRDQLHDHFNAEIVSGTI 1106
+ S +D + D N I+ G I
Sbjct: 663 NFESYQDLVLDFNNILILEGHI 684
>TIGR_CMR|SPO_3098 [details] [associations]
symbol:SPO_3098 "ATP-dependent helicase, DEAD/DEAH box
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR013701
InterPro:IPR017170 Pfam:PF00270 Pfam:PF00271 Pfam:PF08494
PIRSF:PIRSF037307 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03724 RefSeq:YP_168301.1 ProteinModelPortal:Q5LNV5
GeneID:3195597 KEGG:sil:SPO3098 PATRIC:23379641
HOGENOM:HOG000036041 OMA:SYEDAPR ProtClustDB:CLSK2308438
InterPro:IPR026362 TIGRFAMs:TIGR04121 Uniprot:Q5LNV5
Length = 802
Score = 114 (45.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 45/166 (27%), Positives = 83/166 (50%)
Query: 708 LLGAPTGSGKTISAELAML-HLFNTQSD-MKVVYIAPLKAIVRERMNDWKDRLVSQLGKE 765
LL APTG GKT++ L L L Q + +Y++PLKA+ + + + V ++G
Sbjct: 36 LLIAPTGGGKTMAGFLPTLAELAEGQHQGLHTLYVSPLKALAADIKRNLRTP-VDEIGLA 94
Query: 766 M-VE-MTGDYTPDLMALLSAD---IIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLL 820
+ +E TGD + AD I+++TPE ++ + + +++DEIH L
Sbjct: 95 VRIEDRTGDTSATQKKRQRADPPHILLTTPESLALLTSYEDAPRMFAGLRRVVVDEIHAL 154
Query: 821 G-AERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWL 865
++RG L + ++R++ + R +GLS + + +A +L
Sbjct: 155 AESKRGDQLMLALARLQTLCPDLRR----VGLSATVEDPQAIARFL 196
Score = 78 (32.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 978 IGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNL-PAHLVIIKGTEYYDGKTKR 1036
IG+HH L+ R VE +++ +VCT +L G++ LVI G KR
Sbjct: 276 IGIHHGSLDRAQRERVEAAMVRGELRAIVCTGSLDLGIDWGDVDLVIQIGAPK---NVKR 332
Query: 1037 YVDFPITDILQMMGRAGRPQYDQHGKAVIL 1066
V Q +GRA +Y+ KA+++
Sbjct: 333 LV--------QRIGRANH-RYNAPSKALLV 353
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 1286 AMIDICANSGWLSSSITCMHLLQMVMQGLWFEQD 1319
A +D CA G+ + LQ G W +D
Sbjct: 426 ACLDFCATGGYALRAYDRWQRLQQRPDGQWQLRD 459
>GENEDB_PFALCIPARUM|PF14_0234 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase,
putative" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 49/243 (20%), Positives = 102/243 (41%)
Query: 903 MNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQ--FAASDETP-RQFLGMPEEDLQ 959
+N Y A+ ++ LIF +++ ++LI P Q++ M ++L+
Sbjct: 625 INSLLYFALHSYINNLNTLIFCCTKKMCEFY-INLINEYLNTLKSLPIPQYIDMKRKELK 683
Query: 960 MVLSQVTD---QNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVN 1016
+ + + + + + G+ +++ ++ + L+E + + +L CTSTL+ G+N
Sbjct: 684 EKIYNIDKCIYEKMHKLISNGLCYYYSDISHSVKRLLEVAYKEKTLFLLTCTSTLSVGLN 743
Query: 1017 LPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYK 1076
L VII + ++ + T QM+GRA R + G + I V K + K
Sbjct: 744 LFVDRVIISSPFV----AQNFLTY--TQYKQMIGRAARLK---KGDSFIFVD---KEYEK 791
Query: 1077 KFLY---EPFP-VESSLRDQLHDHFNAEIVSGTIFHKE-------DAVHYLSWTYLFRRL 1125
K L E F + S++ + ++ + E D +H S++ +
Sbjct: 792 KMLNIFKETFTNITSTMHANTFEELEKYVIEFLCLYNENEYISFYDVIHMFSFSLYYTET 851
Query: 1126 AIN 1128
+N
Sbjct: 852 ILN 854
Score = 79 (32.9 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 811 LMILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGE 869
++I+DE H + + RG +E IVS++ Y++ + R ++ I +S L N L W+ +
Sbjct: 207 IVIIDEFHHINEKGRGIYIENIVSKILYMNKKRSR-IKIICMSGTLNNISILKKWMKA-K 264
Query: 870 IGLFNFKPS-VRP---VPLEVHIQGYPGKFY--CPRMNSMNKPAY 908
+ ++P ++ V+ + GKFY C + S N Y
Sbjct: 265 FYISTYRPQEIKEHYVCNFNVYKKVQDGKFYNTC-NVFSFNDTCY 308
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKD 756
N + APT GKT+ EL + ++ ++ PLK+++ E+M K+
Sbjct: 85 NFICVAPTSGGKTLVTELFIFEEIKN-GKKQIFFLFPLKSLINEKMTYLKN 134
Score = 41 (19.5 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 18/89 (20%), Positives = 37/89 (41%)
Query: 324 LDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSE 383
+DK K+ +DEK +L + +F + S+ Y + + D+ E + E
Sbjct: 13 IDKNKIFEWDEKKNE----KLKDVCKNFIKKDYSIHHY--VTNPIIIDNYKKEKIKELYE 66
Query: 384 FENIVVRDEEQNELETLVQTLCPVEVKGG 412
+++ +R+ + E +C GG
Sbjct: 67 WQDECLRELRKVNWEKGENFICVAPTSGG 95
>UNIPROTKB|Q8ILK9 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 49/243 (20%), Positives = 102/243 (41%)
Query: 903 MNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQ--FAASDETP-RQFLGMPEEDLQ 959
+N Y A+ ++ LIF +++ ++LI P Q++ M ++L+
Sbjct: 625 INSLLYFALHSYINNLNTLIFCCTKKMCEFY-INLINEYLNTLKSLPIPQYIDMKRKELK 683
Query: 960 MVLSQVTD---QNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVN 1016
+ + + + + + G+ +++ ++ + L+E + + +L CTSTL+ G+N
Sbjct: 684 EKIYNIDKCIYEKMHKLISNGLCYYYSDISHSVKRLLEVAYKEKTLFLLTCTSTLSVGLN 743
Query: 1017 LPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYK 1076
L VII + ++ + T QM+GRA R + G + I V K + K
Sbjct: 744 LFVDRVIISSPFV----AQNFLTY--TQYKQMIGRAARLK---KGDSFIFVD---KEYEK 791
Query: 1077 KFLY---EPFP-VESSLRDQLHDHFNAEIVSGTIFHKE-------DAVHYLSWTYLFRRL 1125
K L E F + S++ + ++ + E D +H S++ +
Sbjct: 792 KMLNIFKETFTNITSTMHANTFEELEKYVIEFLCLYNENEYISFYDVIHMFSFSLYYTET 851
Query: 1126 AIN 1128
+N
Sbjct: 852 ILN 854
Score = 79 (32.9 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 811 LMILDEIHLLGAE-RGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGE 869
++I+DE H + + RG +E IVS++ Y++ + R ++ I +S L N L W+ +
Sbjct: 207 IVIIDEFHHINEKGRGIYIENIVSKILYMNKKRSR-IKIICMSGTLNNISILKKWMKA-K 264
Query: 870 IGLFNFKPS-VRP---VPLEVHIQGYPGKFY--CPRMNSMNKPAY 908
+ ++P ++ V+ + GKFY C + S N Y
Sbjct: 265 FYISTYRPQEIKEHYVCNFNVYKKVQDGKFYNTC-NVFSFNDTCY 308
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 706 NVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKD 756
N + APT GKT+ EL + ++ ++ PLK+++ E+M K+
Sbjct: 85 NFICVAPTSGGKTLVTELFIFEEIKN-GKKQIFFLFPLKSLINEKMTYLKN 134
Score = 41 (19.5 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 18/89 (20%), Positives = 37/89 (41%)
Query: 324 LDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSE 383
+DK K+ +DEK +L + +F + S+ Y + + D+ E + E
Sbjct: 13 IDKNKIFEWDEKKNE----KLKDVCKNFIKKDYSIHHY--VTNPIIIDNYKKEKIKELYE 66
Query: 384 FENIVVRDEEQNELETLVQTLCPVEVKGG 412
+++ +R+ + E +C GG
Sbjct: 67 WQDECLRELRKVNWEKGENFICVAPTSGG 95
>UNIPROTKB|H9L1I6 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
Ensembl:ENSGALT00000035544 Uniprot:H9L1I6
Length = 571
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 650 HNLAL-PQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVL 708
H AL P+ S +L+ ++ LP A +E F N IQ++++ +D N+L
Sbjct: 446 HVPALKPKPFGSEEQLVSVEKLPKYAQAG--FEG---FKTLNRIQSKLYRAALESDENLL 500
Query: 709 LGAPTGSGKTISAELAMLHLFNTQSDM---------KVVYIAPLKAIVRERMNDWKDRLV 759
L APTG+GKT A + ML +M K++YIAP++++V+E + + RL
Sbjct: 501 LCAPTGAGKTNVALMCMLREIGKHINMDGTINVDEFKIIYIAPMRSLVQEMVGSFGKRLW 560
Query: 760 SQLG 763
Q G
Sbjct: 561 LQEG 564
>POMBASE|SPAC23A1.19c [details] [associations]
symbol:hrq1 "RecQ type DNA helicase Hrq1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000405 "bubble DNA
binding" evidence=IDA] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006289
"nucleotide-excision repair" evidence=IMP;IPI] [GO:0035861 "site of
double-strand break" evidence=IDA] [GO:0043140 "ATP-dependent 3'-5'
DNA helicase activity" evidence=IDA] [GO:0070914 "UV-damage
excision repair" evidence=IMP] [GO:1901255 "nucleotide-excision
repair involved in interstrand cross-link repair" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC23A1.19c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0070914
GO:GO:0043140 GO:GO:0000405 InterPro:IPR014939 Pfam:PF08839
SMART:SM01075 GO:GO:0035861 RefSeq:NP_594448.2
ProteinModelPortal:O13983 STRING:O13983 EnsemblFungi:SPAC23A1.19c.1
GeneID:2542036 KEGG:spo:SPAC23A1.19c eggNOG:COG1205
HOGENOM:HOG000163591 OMA:DELHVYK OrthoDB:EOG4BVW2R NextBio:20803114
GO:GO:1901255 InterPro:IPR018973 Pfam:PF09369 Uniprot:O13983
Length = 1063
Score = 103 (41.3 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 48/218 (22%), Positives = 91/218 (41%)
Query: 675 LGNNIYEALYNFSHFNPIQTQIFHILYHTDN--NVLLGAPTGSGKTISAELAMLHLFNTQ 732
L + ALY + + H N +V++ T SGK++ ++ +L
Sbjct: 295 LSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSLLED 354
Query: 733 SDMKVVYIAPLKAIVRERMNDWKDRL--VSQLGKEMVE-MTGDYTP--DLMALL-SADII 786
+ ++ P K++ +++ D L + L V+ GD TP +++ SA+II
Sbjct: 355 NQSTAFFVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGD-TPLESRESIIRSANII 413
Query: 787 ISTPEKWDGI----SRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQT 842
+ P+ + W+ + K + L +LDE H+ G + ++ RMR I+
Sbjct: 414 FTNPDMLHQTILPNANRWYY--FFKNLKLFVLDEAHVYNGIFGVHVAFVLRRMRRIAEYF 471
Query: 843 ERA-VRFIGLSTALANA-GDLADWLGVGEIGLFNFKPS 878
+ RF+ S + + + GV I L N+ S
Sbjct: 472 GNSQYRFVSCSATIEDPLQHMKKIFGVDNIKLINYTSS 509
Score = 69 (29.3 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 31/124 (25%), Positives = 53/124 (42%)
Query: 956 EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV 1015
E L ++ Q + L I + AG ++R +E N K+ ++ T+ L G+
Sbjct: 565 ESLMRLVRQELKTKQKGDLLSKIQSYRAGYTVQERRKIESEMFNGKLYGIIATNALELGI 624
Query: 1016 NLPA-HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHE-PKKS 1073
++ + VI G Y ++++ Q GRAGR ++ AV +V P
Sbjct: 625 DIGSLDAVITIGFPY-----------SLSNLRQQFGRAGRR--NKSSLAVYIVETFPVDQ 671
Query: 1074 FYKK 1077
FY K
Sbjct: 672 FYLK 675
Score = 61 (26.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 228 IIITSHDKLAYYLR-LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAW---LGYT 283
+I T++ L YLR LT P+ + SS+K +L E+ +G ++ ++E C L Y
Sbjct: 64 VINTTYTFL--YLRNSLTITFPLLN---SSVKQSLKKELTIGDLSQLREICPQIIELNYK 118
Query: 284 YL-SIRMKLNPLAY 296
L S+ +++N Y
Sbjct: 119 SLASLALEINKNVY 132
>TIGR_CMR|CBU_0305 [details] [associations]
symbol:CBU_0305 "ATP-dependent DNA helicase RecG"
species:227377 "Coxiella burnetii RSA 493" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR001650
InterPro:IPR004365 InterPro:IPR004609 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01336 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006281 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0004003
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000036617 KO:K03655 OMA:DRTRITP ProtClustDB:PRK10917
TIGRFAMs:TIGR00643 HSSP:Q9WY48 RefSeq:NP_819348.1
ProteinModelPortal:Q83EL4 PRIDE:Q83EL4 GeneID:1208187
KEGG:cbu:CBU_0305 PATRIC:17929305
BioCyc:CBUR227377:GJ7S-312-MONOMER Uniprot:Q83EL4
Length = 704
Score = 110 (43.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 956 EDLQMVLSQVTDQNLRQTL-QFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWG 1014
E LQ ++ T + L+Q+ +GL H L +++ +V F N I +LV T+ + G
Sbjct: 508 EVLQCETAEATFKKLQQSFTNLSVGLIHGRLTKEEKDVVMGAFKNGDIDLLVATTVIEVG 567
Query: 1015 VNLP-AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEP 1070
V++P A L++I+ +E + I Q+ GR GR + Q V+L EP
Sbjct: 568 VDVPNASLMVIENSERLG----------LAQIHQLRGRVGRGE--QKSYCVLLYQEP 612
Score = 70 (29.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/117 (22%), Positives = 49/117 (41%)
Query: 708 LLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMV 767
LL GSGKTI A +A+L ++ + +AP + + + ++ R S LG +
Sbjct: 306 LLQGDVGSGKTIVAAMAILKA--VENGYQSAIMAPTELLAEQHYQVFQ-RWFSPLGIRVG 362
Query: 768 EMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAER 824
+ G TP +I G + + +++ +++DE H G +
Sbjct: 363 WLAGSLTPSAREKTLQEIASGQLSVIIGTHALFQAAVTFQQLAFIVIDEQHRFGVHQ 419
>GENEDB_PFALCIPARUM|PF13_0102 [details] [associations]
symbol:PF13_0102 "DNAJ-like Sec63 homologue"
species:5833 "Plasmodium falciparum" [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISS] [GO:0005784 "Sec61
translocon complex" evidence=ISS] [GO:0045047 "protein targeting to
ER" evidence=ISS] InterPro:IPR027137 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 GO:GO:0006457 GO:GO:0030176
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 GO:GO:0005784 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 EMBL:AL844509 HSSP:P08622 GO:GO:0045047
KO:K09540 PANTHER:PTHR24075 RefSeq:XP_001349924.1
ProteinModelPortal:Q8IEC8 IntAct:Q8IEC8 MINT:MINT-1606227
PRIDE:Q8IEC8 EnsemblProtists:PF13_0102:mRNA GeneID:814078
KEGG:pfa:PF13_0102 EuPathDB:PlasmoDB:PF3D7_1318800
HOGENOM:HOG000280883 OMA:RIWERIG ProtClustDB:CLSZ2429140
Uniprot:Q8IEC8
Length = 651
Score = 127 (49.8 bits), Expect = 0.00049, P = 0.00049
Identities = 62/314 (19%), Positives = 141/314 (44%)
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ I ++ + F +L+ +E ++ ++ +++ + + L + + P
Sbjct: 256 TLQYLTYTINENSRSKSFPEMLAATAESRDIEMKKDDEQYIKTLMEEL-IEPKKRTFKIP 314
Query: 1248 HVKAN-LLFQAHFSRL-DLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMH 1305
+ N L AH R DL D DL+ +L S+ I +MI+I W ++ + +
Sbjct: 315 VITKNYFLILAHMQRRHDLLSEDLKKDLEHILKFSLLITHSMIEISILRDWFLTAQSALT 374
Query: 1306 LLQMVMQGLWFE-QDSALWMFPCMNNDLLGTLRARGISTVQQLLDI---PKENLQTVIGN 1361
+ ++Q FE ++S+L P + +++ + +G +V+++LD EN + ++
Sbjct: 375 FRRCLIQA--FEAKNSSLLQIPHFDENIVRHVH-KGKFSVKEVLDFVHQDHENRKGLVDM 431
Query: 1362 FPVSRLHQDLQRF----PRIQVKLRLQRRD----IDGENSLTLNIRMDKMNSWKNTSRAF 1413
P L D++ F P I++ + D + G+ + ++ +++D+ N +N + +
Sbjct: 432 NPDQIL--DVKSFCNTIPDIKMTAHIVVEDETHIVKGDVA-SVYVQIDRSNLKENEAAGY 488
Query: 1414 --ALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVS 1471
A FP+ K E WW++ N + + +++ +L + + + V +
Sbjct: 489 IHAPYFPQPKFEEWWIIATYKNDDRILKYVHVKNCEKI-IEEKLQFLVDKVGNLSVSVFA 547
Query: 1472 DC--YLGFEQEHSI 1483
C Y G +Q+ I
Sbjct: 548 LCDSYFGCDQKVDI 561
>UNIPROTKB|Q8IEC8 [details] [associations]
symbol:PF13_0102 "DnaJ/SEC63 protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005784 "Sec61
translocon complex" evidence=ISS] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISS] [GO:0045047 "protein
targeting to ER" evidence=ISS] InterPro:IPR027137
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0006457
GO:GO:0030176 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076 GO:GO:0005784
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 EMBL:AL844509
HSSP:P08622 GO:GO:0045047 KO:K09540 PANTHER:PTHR24075
RefSeq:XP_001349924.1 ProteinModelPortal:Q8IEC8 IntAct:Q8IEC8
MINT:MINT-1606227 PRIDE:Q8IEC8 EnsemblProtists:PF13_0102:mRNA
GeneID:814078 KEGG:pfa:PF13_0102 EuPathDB:PlasmoDB:PF3D7_1318800
HOGENOM:HOG000280883 OMA:RIWERIG ProtClustDB:CLSZ2429140
Uniprot:Q8IEC8
Length = 651
Score = 127 (49.8 bits), Expect = 0.00049, P = 0.00049
Identities = 62/314 (19%), Positives = 141/314 (44%)
Query: 1188 TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP 1247
T+ I ++ + F +L+ +E ++ ++ +++ + + L + + P
Sbjct: 256 TLQYLTYTINENSRSKSFPEMLAATAESRDIEMKKDDEQYIKTLMEEL-IEPKKRTFKIP 314
Query: 1248 HVKAN-LLFQAHFSRL-DLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMH 1305
+ N L AH R DL D DL+ +L S+ I +MI+I W ++ + +
Sbjct: 315 VITKNYFLILAHMQRRHDLLSEDLKKDLEHILKFSLLITHSMIEISILRDWFLTAQSALT 374
Query: 1306 LLQMVMQGLWFE-QDSALWMFPCMNNDLLGTLRARGISTVQQLLDI---PKENLQTVIGN 1361
+ ++Q FE ++S+L P + +++ + +G +V+++LD EN + ++
Sbjct: 375 FRRCLIQA--FEAKNSSLLQIPHFDENIVRHVH-KGKFSVKEVLDFVHQDHENRKGLVDM 431
Query: 1362 FPVSRLHQDLQRF----PRIQVKLRLQRRD----IDGENSLTLNIRMDKMNSWKNTSRAF 1413
P L D++ F P I++ + D + G+ + ++ +++D+ N +N + +
Sbjct: 432 NPDQIL--DVKSFCNTIPDIKMTAHIVVEDETHIVKGDVA-SVYVQIDRSNLKENEAAGY 488
Query: 1414 --ALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVS 1471
A FP+ K E WW++ N + + +++ +L + + + V +
Sbjct: 489 IHAPYFPQPKFEEWWIIATYKNDDRILKYVHVKNCEKI-IEEKLQFLVDKVGNLSVSVFA 547
Query: 1472 DC--YLGFEQEHSI 1483
C Y G +Q+ I
Sbjct: 548 LCDSYFGCDQKVDI 561
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 96 (38.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 45/157 (28%), Positives = 71/157 (45%)
Query: 647 ISFHNLALPQARTSHTEL---LDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHT 703
I+ H +P T+ EL DL P + +NI A F PIQ Q ++ H
Sbjct: 151 INVHGTDIPDPVTTFEELQKEYDLDPRII----HNIKAA--GFQTPTPIQMQAVPLMMHK 204
Query: 704 DNNVLLGAPTGSGKTISAELAML-HLFNT-QSDMKVVYIAPLKAIV----RE--RMNDWK 755
+L APTGSGKT++ L +L HL + + I+P + + RE ++++
Sbjct: 205 -REILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRALIISPTRELATQTHRELLKLSEGV 263
Query: 756 DRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEK 792
V + K VE Y P + DI+++TP +
Sbjct: 264 GFRVHMINKG-VEAVKKYGPK--SAKKFDILVTTPNR 297
Score = 81 (33.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 29/91 (31%), Positives = 42/91 (46%)
Query: 982 HAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFP 1041
HA + R V F + KI VL+CT+ LA G++ ++I YD T V++
Sbjct: 445 HADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINLVIN----YDFPTSA-VEY- 498
Query: 1042 ITDILQMMGRAGRPQYDQHGKAVILVHEPKK 1072
+ +GR GR + GKAV E K
Sbjct: 499 ----IHRIGRTGRAGHK--GKAVTFFTEDDK 523
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 107 (42.7 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 48/178 (26%), Positives = 85/178 (47%)
Query: 685 NFSHFNPIQTQIFHILYHTDNNVLLG-APTGSGKTISAELAMLH-LFNTQSDMKVVYIAP 742
N+S PIQ++ I + + ++G A TGSGKT + + +L+ L++ Q +AP
Sbjct: 100 NYSKPTPIQSKA--IPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAP 157
Query: 743 LKAIVRERMNDWKDRLVSQLGKEMVEMTG-----DYTPDLMALLSADIIISTPEKWDGIS 797
+ + ++ + + D L S +G + G D DLM III+TP +
Sbjct: 158 TRELAQQ-IKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR--KPHIIIATPGRLMDHL 214
Query: 798 RNWHSRNYVKKVGLMILDEI-HLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTA 854
N + ++K+ +++DE LL E GP+L+ I ++ I +Q F T+
Sbjct: 215 ENTKGFS-LRKLKFLVMDEADRLLDMEFGPVLDRI---LKIIPTQERTTYLFSATMTS 268
Score = 73 (30.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 50/206 (24%), Positives = 82/206 (39%)
Query: 915 SPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDL--QMVLSQVTDQN--- 969
S T PV VS++ QT T + + + + E + M++ T N
Sbjct: 277 SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAER 336
Query: 970 ---LRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKG 1026
L L+F H LN R +LF K +LV T A G+++P+ +++
Sbjct: 337 LSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNY 396
Query: 1027 TEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFY---KKFLYEPF 1083
D K+ Y+ +GR R + GK++ LV + ++ L +
Sbjct: 397 DIPVDSKS--YI--------HRVGRTARA--GRSGKSISLVSQYDLELILRIEEVLGKKL 444
Query: 1084 PVES-------SLRDQLHDHFNAEIV 1102
P ES +LRD + D N E+V
Sbjct: 445 PKESVDKNIILTLRDSV-DKANGEVV 469
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 91 RKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLI 138
R ++ +KL++ A + E +D+ + KK V+KS++K +
Sbjct: 24 RAKALENQKKLIE-AEKEGGSE---SDSEEDATAEKKKVLKSKSKSTV 67
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1492 1492 0.00097 124 3 11 22 0.37 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 156
No. of states in DFA: 631 (67 KB)
Total size of DFA: 633 KB (2279 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 123.48u 0.11s 123.59t Elapsed: 00:00:05
Total cpu time: 123.57u 0.11s 123.68t Elapsed: 00:00:06
Start: Mon May 20 19:07:56 2013 End: Mon May 20 19:08:02 2013
WARNINGS ISSUED: 1