BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043191
(414 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 191/348 (54%), Gaps = 29/348 (8%)
Query: 54 KERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 113
+ER +S + I ++A+ +F M++ RP P V F+ LF +AKTK YD VL+L
Sbjct: 57 RERLRSG----LVDIKADDAIDLFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 114 KRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE 173
K++ L G+ + YT +I+INCFC+ ++ F +G+I++ + P+ +TF++LI LC E
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 174 SRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCE 233
R+ EA L ++ G + D+ T NTL+NGLC +G A+ L ++M E+G C+
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQ 225
Query: 234 PDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGL 293
P+A+TY +++ +CK +A + L KM ++ + + +IDGL
Sbjct: 226 PNAVTYGPVLNVMCKSGQTA--------LAMELLRKMEER----NIKLDAVKYSIIIDGL 273
Query: 294 CKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNST 353
CK L A LF + G+ N++TYNILI G CN G+ D+ L + +
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK------LLRDMIKR 327
Query: 354 GLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ P++ T+++LI+ F K G++ + ++ PD +T+TSLI
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 143/321 (44%), Gaps = 24/321 (7%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +F++L K L K + G+ PD TY LI+ FCK +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
++ ++ P+ TF LI C +RI + LF K+ + G D TYNTLI
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C G VA LF+EM + P+ +TY ++DGLC S L
Sbjct: 447 GFCELGKLNVAKELFQEMVSRK------VPPNIVTYKILLDGLCDNGESEKALEI----- 495
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
F + K + + +I G+C SK+ A +LF SLP G+ P V TYNI
Sbjct: 496 FEKIEKSKMELDIGI-------YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 324 LIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFG 383
+I GLC G + E + LLF+++ G PD +TYNILI G + +
Sbjct: 549 MIGGLCKKGPLSEAE------LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 384 RILPSCFTPDAVTFTSLIKIL 404
+ F+ DA T +I +L
Sbjct: 603 ELKRCGFSVDASTIKMVIDML 623
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 156/348 (44%), Gaps = 47/348 (13%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R + ++I+ L K D +LF + + G+ + TYNILI FC GR
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
G +L +++ P+ VTF+ LI E ++ EA L ++ G D TY +LI+
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C+ H A + + M + C+P+ T++ +I+G CK AN +
Sbjct: 377 GFCKENHLDKANQMVDLMVSKG------CDPNIRTFNILINGYCK----ANRID----DG 422
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
KM+ L V + + LI G C++ KL +A+ELFQ + + PN+VTY I
Sbjct: 423 LELFRKMS----LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 324 LIRGLCNDGQMDE-----------------------------TKHYETVFLLFKRLNSTG 354
L+ GLC++G+ ++ + + LF L G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ P + TYNI+I CK G +S ++F ++ PD T+ LI+
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
+I+ C+ KL +A + + G PN +T++ LI GLC +G++ E L
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA------LELVD 182
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
R+ G PDL T N L+N C G+ + ++ +++ P+AVT+ ++ ++
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 81 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGR 140
L ++ +P V ++NI+ G L K LF+++ G PD +TYNILI G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEA 179
+ ++ + R F+ DA T +I D+ ++ R+ ++
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVI-DMLSDGRLKKS 631
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 187/350 (53%), Gaps = 31/350 (8%)
Query: 54 KERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 113
+ER +S I I ++A+ +F M+ RP P + F+ F +A+TK ++ VL
Sbjct: 57 RERLRSG----IVDIKKDDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 114 KRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE 173
K+L L G+ + YT NI+INCFC+ + + VLG++++ + PD TF +LIK L E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 174 SRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCE 233
++ EA L ++ GC+ DV TYN+++NG+CR+G T +AL+L +M N +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VK 225
Query: 234 PDAITYSTIIDGLCKEAG-SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDG 292
D TYSTIID LC++ A F M + + + Y LVR G
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR-------------G 272
Query: 293 LCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNS 352
LCK K L + + ++PNV+T+N+L+ +G++ E L+K + +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE------LYKEMIT 326
Query: 353 TGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
G+ P++ TYN L++ +C R+S + ++ + +PD VTFTSLIK
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 24/321 (7%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +FN+L K L+K + G+ P+ TYN L++ +C R+S
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
+L ++R+ +PD VTFTSLIK C R+ + +F + G + TY+ L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C++G +A LF+EM + GV+ PD +TY ++DGLC L
Sbjct: 412 GFCQSGKIKLAEELFQEMVS----HGVL--PDVMTYGILLDGLCDNGKLEKALEI----- 460
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
F L K +V + +I+G+CK K++ A LF SLP G+ PNV+TY +
Sbjct: 461 FEDLQKSKMDLGIVM-------YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 324 LIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFG 383
+I GLC G + E +L +++ G P+ TYN LI + G +++ +
Sbjct: 514 MISGLCKKGSLSEAN------ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 384 RILPSCFTPDAVTFTSLIKIL 404
+ F+ DA + +I +L
Sbjct: 568 EMKSCGFSADASSIKMVIDML 588
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 175/348 (50%), Gaps = 29/348 (8%)
Query: 54 KERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 113
KER ++ I I N+A+ +F+ M+ RP P+ FN L +A+TK YD VL
Sbjct: 39 KERLRNG----IVDIKVNDAIDLFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFC 93
Query: 114 KRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE 173
K + L G+ D YT I+INC+C+ ++ F VLGR + + PD +TF++L+ C E
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 174 SRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCE 233
R+ EA AL ++ D+ T +TLINGLC G AL L + M E+G +
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV----EYGF--Q 207
Query: 234 PDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGL 293
PD +TY +++ LCK SA L N ++ + + +ID L
Sbjct: 208 PDEVTYGPVLNRLCKSGNSA--LALDLFRKMEERN----------IKASVVQYSIVIDSL 255
Query: 294 CKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNST 353
CK A LF + G+ +VVTY+ LI GLCNDG+ D+ + + +
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK------MLREMIGR 309
Query: 354 GLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ PD+ T++ LI+ F K G++ ++ ++ PD +T+ SLI
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 47/348 (13%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R + V ++I+ L K +D LSLF + + G+ D TY+ LI C G+
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
G +L ++ PD VTF++LI E +++EA L+ ++ G D TYN+LI+
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C+ A +F+ M + CEPD +TYS +I+ CK + M
Sbjct: 359 GFCKENCLHEANQMFDLMVSKG------CEPDIVTYSILINSYCKAKRVDD-----GMRL 407
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
F ++ + L L F C+ KL A+ELFQ + G+ P+VVTY I
Sbjct: 408 FREISSKGLIPNTITYNTLVLGF-------CQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 324 LIRGLCNDGQMDE-----------------------------TKHYETVFLLFKRLNSTG 354
L+ GLC++G++++ + + LF L+ G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ PD+ TYN++I CK G +S ++F ++ TPD T+ LI+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N A +F M++ R P V ++ IL L + L +F+++ + + YNI
Sbjct: 437 NAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I+ C +V + + + PD VT+ +I LC + + EA LF K++ G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--EPDAITYSTIIDGLCK 248
C D FTYN LI I ++ L EEM VC D+ T +ID L
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMK--------VCGFSADSSTIKMVIDMLSD 607
Query: 249 EAGSANFL 256
+FL
Sbjct: 608 RRLDKSFL 615
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 177/338 (52%), Gaps = 25/338 (7%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
+ S+ NEAL +F +M+ RP P + F L +AK K +D V++L L + G+ D
Sbjct: 48 LHSLQFNEALDLFTHMVESRP-LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHD 106
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFT 184
YT N+L+NCFC+ + LG++++ F PD VTFTSLI C +R+ EA ++
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 185 KLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIID 244
++ G + DV Y T+I+ LC+ GH AL+LF++M N +G+ PD + Y+++++
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVN 220
Query: 245 GLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARE 304
GLC + + S L M +++ + F LID K K A E
Sbjct: 221 GLCNSGRWRD--------ADSLLRGMTKR----KIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
L+ + R + PN+ TY LI G C +G +DE + +F + + G FPD+ Y
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ------MFYLMETKGCFPDVVAYTS 322
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
LIN FCK +V IF + T + +T+T+LI+
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 68/396 (17%)
Query: 52 FLKERCKSSGEGDITSITP-----------NEALCVFDYMLNMRPSRPPVTSFNILFGCL 100
FL + K E DI + T EA+ + + M+ M +P V + + L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSL 187
Query: 101 AKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDA 160
K H + LSLF ++ G+ PD Y L+N C GR +L + + PD
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 161 VTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEE 220
+TF +LI E + ++A L+ ++ ++FTY +LING C G A +F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 221 MANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQ 280
M C PD + Y+++I+G CK C A+ K+ + +
Sbjct: 308 METKG------CFPDVVAYTSLINGFCK-----------CKKVDDAM-KIFYEMSQKGLT 349
Query: 281 CLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHY 340
+ + LI G ++ K +A+E+F + G+ PN+ TYN+L+ LC +G++ K
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV---KKA 406
Query: 341 ETVFLLFKRLNSTGLFPDLYTYNILI---------------------------------- 366
+F ++ G+ P+++TYN+L+
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 367 -NCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
CK G+V + +F + P+ VT+T++I
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 56/353 (15%)
Query: 8 NGRMRFADRLSRKPTSSISENEPSYPTTTATLRLTVKDRASL--EQFLKERCKSSGEGDI 65
+GR R AD L R T + +P T A + VK+ L E+ E +
Sbjct: 225 SGRWRDADSLLRGMTKR--KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR------- 275
Query: 66 TSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDR 125
SI PN +F Y + F + GC+ D +F + G FPD
Sbjct: 276 MSIAPN----IFTY-------TSLINGF-CMEGCV------DEARQMFYLMETKGCFPDV 317
Query: 126 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTK 185
Y LIN FCK +V + + + T + +T+T+LI+ + A +F+
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 186 LRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDG 245
+ G ++ TYN L++ LC G AL +FE+M + GV P+ TY+ ++ G
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-GVA--PNIWTYNVLLHG 434
Query: 246 LCKEAGSANFLGFSCMASFSALNKMAFYFPLVR---VQCLCLNFLCLIDGLCKISKLKIA 302
LC L K F +R + + + +I G+CK K+K A
Sbjct: 435 LCYNG---------------KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 303 RELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGL 355
LF SLP G+ PNVVTY +I GL +G KH V LF+++ G+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREG----LKHEAHV--LFRKMKEDGV 526
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 284 LNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETV 343
++F L++ + K+ K + L L G+ ++ T N+L+ C Q + +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQ----PYLASS 128
Query: 344 FLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
FL ++ G PD+ T+ LIN FC R+ + +++ PD V +T++I
Sbjct: 129 FL--GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 404 L 404
L
Sbjct: 187 L 187
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 174/337 (51%), Gaps = 25/337 (7%)
Query: 66 TSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDR 125
+S+ E + +F M+ RP P + F+ + +AK+K+YD V+SLF + + G+ D
Sbjct: 46 SSMNLEEEIDLFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 126 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTK 185
Y+YNI+INC C+ R V+G++++ + PD VT +SLI C +R+ +A L +K
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 186 LRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDG 245
+ G DV YNT+I+G C+ G A+ LF+ M GV DA+TY++++ G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAG 218
Query: 246 LCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAREL 305
LC C +S ++ + + + F +ID K K A +L
Sbjct: 219 LC------------CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNIL 365
++ + R + P+V TYN LI GLC G++DE K + + + G PD+ TYN L
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ------MLDLMVTKGCLPDVVTYNTL 320
Query: 366 INCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
IN FCK RV G +F + D +T+ ++I+
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 28/322 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N+A+ +FD M R ++N L L + + L + + + + P+ T+
Sbjct: 191 NDAVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I+ F K G+ S + + R C PD T+ SLI LC R+ EA + + G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C DV TYNTLING C++ LF EMA + G+V D ITY+TII G +A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMA----QRGLV--GDTITYNTIIQGYF-QA 362
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
G + + FS ++ P +R + L+ GLC +++ A LF+++
Sbjct: 363 GRPD----AAQEIFSRMDSR----PNIR------TYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
++ + ++ TYNI+I G+C G + E + LF+ L+ GL PD+ +Y +I+ FC
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNV------EDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 371 KIGRVSSGFVIFGRILPSCFTP 392
+ + +++ ++ P
Sbjct: 463 RKRQWDKSDLLYRKMQEDGLLP 484
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 72/272 (26%)
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I+ FCKM ++S P V F+ ++ + +LF + V G
Sbjct: 54 IDLFCKM-------------IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI 100
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D+++YN +IN LCR ++AL++ +M +FG EPD +T S+
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVSS---------- 144
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
LI+G C+ +++ A +L +
Sbjct: 145 -------------------------------------LINGFCQGNRVFDAIDLVSKMEE 167
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G P+VV YN +I G C G +++ LF R+ G+ D TYN L+ C
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVE------LFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
GR S + ++ P+ +TFT++I +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 25/338 (7%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
+ I N+A+ +F M+ RP P + FN L + K K YD V+SL K++ + G+ D
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFT 184
YT+NI+INCFC +VS +LG++L+ + PD VT SL+ C +R+ +A +L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 185 KLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIID 244
K+ G + D+ YN +I+ LC+T A + F+E+ P+ +TY+ +++
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVVTYTALVN 233
Query: 245 GLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARE 304
GLC + +S ++ ++ + + L+D K K+ A+E
Sbjct: 234 GLCNS------------SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
LF+ + R + P++VTY+ LI GLC ++DE +F + S G D+ +YN
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ------MFDLMVSKGCLADVVSYNT 335
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
LIN FCK RV G +F + + VT+ +LI+
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 147/392 (37%), Gaps = 103/392 (26%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A+ + D M+ + +P + ++N + L KTK + FK + G+ P+ TY
Sbjct: 172 SDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 131 LINCFCKMGRVSHG-------------------------FVVLGRIL----------RSC 155
L+N C R S FV G++L R
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 156 FTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVF------------------- 196
PD VT++SLI LC RI EA +F + GC DV
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 197 ----------------TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYS 240
TYNTLI G + G A F +M FG+ PD TY+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM----DFFGI--SPDIWTYN 404
Query: 241 TIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLK 300
++ GLC L F + K +V + +I G+CK K++
Sbjct: 405 ILLGGLCDNGELEKAL-----VIFEDMQKREMDLDIV-------TYTTVIRGMCKTGKVE 452
Query: 301 IARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLY 360
A LF SL GL P++VTY ++ GLC G + E + L+ ++ GL +
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA------LYTKMKQEGLMKN-- 504
Query: 361 TYNILINCFCKIGRVSSGFVIFGRILPSCFTP 392
+C G ++ + ++L + P
Sbjct: 505 ------DCTLSDGDITLSAELIKKMLSCGYAP 530
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 189/401 (47%), Gaps = 63/401 (15%)
Query: 54 KERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 113
+ER +S I I ++A+ +F M RP RP + F+ LF +A+TK YD VL L
Sbjct: 41 RERLRSG----IVDIKEDDAVDLFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 114 KRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE 173
K++ L G+ + YT +I+INC C+ ++S F +G+I++ + PD VTF++LI LC E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 174 SRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------ 227
R+ EA L ++ G + + T N L+NGLC G A+ L + M +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 228 ---FGVVCEP--------------------DAITYSTIIDGLCKEAGSAN-FLGFSCMAS 263
V+C+ DA+ YS IIDGLCK+ N F F+ M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 264 FSALNKMAFYFPLVRVQCLC----------------------LNFLCLIDGLCKISKLKI 301
+ Y L+R C + F LID K KL+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 302 ARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYT 361
A EL + + + G+ P+ VTY LI G C + Q+D+ H + + S G P++ T
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH------MLDLMVSKGCGPNIRT 389
Query: 362 YNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+NILIN +CK + G +F ++ D VT+ +LI+
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 141/321 (43%), Gaps = 24/321 (7%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +F+ L C K L K + G+ PD TY LI+ FCK ++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
+L ++ P+ TF LI C + I + LF K+ + G D TYNTLI
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C G VA LF+EM + PD ++Y ++DGLC L
Sbjct: 431 GFCELGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEKALEI----- 479
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
F + K + + +I G+C SK+ A +LF SLP G+ P+V TYNI
Sbjct: 480 FEKIEKSKMELDIG-------IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 324 LIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFG 383
+I GLC G + E LLF+++ G P+ TYNILI G + +
Sbjct: 533 MIGGLCKKGSLSEAD------LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 384 RILPSCFTPDAVTFTSLIKIL 404
I F+ DA T ++ +L
Sbjct: 587 EIKRCGFSVDASTVKMVVDML 607
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 47/351 (13%)
Query: 81 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGR 140
+ R + ++I+ L K D +LF + + G D Y LI FC GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
G +L +++ TPD V F++LI E ++ EA L ++ G D TY +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 201 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSC 260
LI+G C+ A ++ + M + C P+ T++ +I+G CK AN +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKG------CGPNIRTFNILINGYCK----ANLID--- 404
Query: 261 MASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
KM+ L V + + LI G C++ KL++A+ELFQ + + P++V+
Sbjct: 405 -DGLELFRKMS----LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 321 YNILIRGLCNDGQ-----------------------------MDETKHYETVFLLFKRLN 351
Y IL+ GLC++G+ M + + LF L
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 352 STGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
G+ PD+ TYNI+I CK G +S ++F ++ +P+ T+ LI+
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
+I+ C+ KL +A + + G P+ VT++ LI GLC +G++ E L
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA------LELVD 166
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
R+ G P L T N L+N C G+VS ++ R++ + F P+ VT+ ++K++
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 81 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGR 140
L ++ +P V ++NI+ G L K LF+++ G P+ TYNILI G
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEA 179
+ ++ I R F+ DA T ++ D+ ++ R+ ++
Sbjct: 578 ATKSAKLIEEIKRCGFSVDAST-VKMVVDMLSDGRLKKS 615
Score = 39.3 bits (90), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 284 LNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETV 343
++F L + + + + +L + + G+ N+ T +I+I C +
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR------CRKLSLA 126
Query: 344 FLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
F ++ G PD T++ LIN C GRVS + R++ P +T +L+
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 404 LEINS 408
L +N
Sbjct: 187 LCLNG 191
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 183/356 (51%), Gaps = 34/356 (9%)
Query: 55 ERCKSSGEGDITSITPN---------EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKH 105
ER +S GD I N +A+ +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNK 98
Query: 106 YDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTS 165
++ V+SL +++ G+ D YTY+I INCFC+ ++S VL ++++ + PD VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 166 LIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 225
L+ C RI +A AL ++ G + D FT+ TLI+GL A+ L ++M
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 226 GEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN 285
C+PD +TY T+++GLCK G + + + LNKM R++ +
Sbjct: 219 ------CQPDLVTYGTVVNGLCKR-GDIDL-------ALNLLNKM----EAARIKANVVI 260
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFL 345
F +ID LCK +++A +LF + G+ PNVVTYN LI LCN G+ + + +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS-NM 319
Query: 346 LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
L K++N P++ T+N LI+ F K G++ + ++ PD +T+ LI
Sbjct: 320 LEKKIN-----PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 62/351 (17%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+ V FN + L K +H + + LF + G+ P+ TYN LINC C GR S
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 147 VLGRILRSCFTPDAVTFTSLI-----------------------------------KDLC 171
+L +L P+ VTF +LI C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
+R+ EA +F + C ++ TYNTLING C+ + LF EM+ + G+V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS----QRGLV 430
Query: 232 CEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLID 291
+ +TY+TII G F C ++ +M RV + + L+
Sbjct: 431 --GNTVTYTTIIQGF--------FQAGDCDSAQMVFKQMVSN----RVPTDIMTYSILLH 476
Query: 292 GLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLN 351
GLC KL A +F+ L ++ + N+ YN +I G+C G++ E +
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---------WDLFC 527
Query: 352 STGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
S + PD+ TYN +I+ C + +F ++ P++ T+ +LI+
Sbjct: 528 SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 29/309 (9%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA + + M+ R P ++N+L D +FK + P+ TYN L
Sbjct: 346 EAEKLHEEMIQ-RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
IN FCK RV G + + + + VT+T++I+ A +F ++
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D+ TY+ L++GLC G AL +F+ + E + Y+T+I+G+CK
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI------FIYNTMIEGMCKAGK 518
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
C S P V + + +I GLC L+ A +LF+ +
Sbjct: 519 VGEAWDLFCSLSIK---------PDV------VTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN TYN LIR D D E L K + S+G D T +++ N
Sbjct: 564 DGTLPNSGTYNTLIRANLRD--CDRAASAE----LIKEMRSSGFVGDASTISLVTNMLHD 617
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 618 -GRLDKSFL 625
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
IL N + +V + G +++S P V F L+ + ++ +L +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
G D++TY+ IN CR +AL + +M + G EPD +T S++++G C
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLSSLLNGYCHS 166
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
++ +A + +M Y P F LI GL +K A L +
Sbjct: 167 KRISD-----AVALVDQMVEMG-YKPDT------FTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
+ G P++VTY ++ GLC G +D L ++ + + ++ +N +I+
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDID------LALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
CK V +F + P+ VT+ SLI L
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 71 NEALCVFDYMLNMR-PSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
+ A VF M++ R P+ + +++IL L DT L +FK L + + + + YN
Sbjct: 450 DSAQMVFKQMVSNRVPT--DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
+I CK G+V + + + PD VT+ ++I LC++ + EA LF K++
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEM 221
G + TYNTLI R + L +EM
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 183/394 (46%), Gaps = 75/394 (19%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A+ +F M+ RP P + FN L +AK +D V+SL +R+ + D Y+YNI
Sbjct: 62 DDAVDLFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF- 189
LINCFC+ ++ VLG++++ + PD VT +SL+ C RI EA AL ++ V
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 190 ----------------------------------GCELDVFTYNTLINGLCRTGHTIVAL 215
GC+ D+FTY T++NGLC+ G +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 216 NLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLG-FSCMASFSALNKMAFYF 274
+L ++M G E D + Y+TIID LC + L F+ M + + Y
Sbjct: 241 SLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 275 PLVRVQCLC------------------------LNFLCLIDGLCKISKLKIARELFQSLP 310
L+R CLC + F LID K KL A +L+ +
Sbjct: 295 SLIR--CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
+ + P++ TY+ LI G C ++DE KH +F+ + S FP++ TYN LI FC
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKH------MFELMISKDCFPNVVTYNTLIKGFC 406
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
K RV G +F + + VT+ +LI+ L
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 39/335 (11%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V + + L K+ + L+LF ++ G+ P+ TYN LI C C GR S +L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF++LI E +++EA L+ ++ + D+FTY++LING C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMASFS 265
A ++FE M + + C P+ +TY+T+I G CK E G M F
Sbjct: 375 RLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEG---------MELFR 419
Query: 266 ALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILI 325
+++ V + LI GL + +A+++F+ + G+ P+++TY+IL+
Sbjct: 420 EMSQRGLVGNTV-------TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 326 RGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRI 385
GLC G++ E ++F+ L + + PD+YTYNI+I CK G+V G+ +F +
Sbjct: 473 DGLCKYGKL------EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 386 LPSCFTPDAVTFTSLIKIL-------EINSFFRQV 413
P+ + +T++I E ++ FR++
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 25/332 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N+AL +F M N + RP V ++N L CL + L + + P+ T++
Sbjct: 272 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ F K G++ + +++ PD T++SLI C R+ EA +F +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C +V TYNTLI G C+ + LF EM+ + G+V + +TY+T+I GL
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGL---- 440
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
F C + KM V + + L+DGLCK KL+ A +F+ L
Sbjct: 441 ----FQAGDCDMAQKIFKKMVSD----GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
++ + P++ TYNI+I G+C G++++ + LF L+ G+ P++ Y +I+ FC
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDG------WDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ G +F + P++ T+ +LI+
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 150/328 (45%), Gaps = 36/328 (10%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFC---KMGR 140
R P V +F+ L K L+ + + PD +TY+ LIN FC ++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
H F ++ I + CF P+ VT+ +LIK C R+ E LF ++ G + TYNT
Sbjct: 379 AKHMFELM--ISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 201 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSC 260
LI GL + G +A +F++M + GV PD ITYS ++DGLCK
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSD----GV--PPDIITYSILLDGLCK------------ 477
Query: 261 MASFSALNKMAFYFPLV---RVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPN 317
+ L K F + +++ + +I+G+CK K++ +LF SL G+ PN
Sbjct: 478 ---YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 318 VVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSS 377
V+ Y +I G C G +E LF+ + G P+ TYN LI + G ++
Sbjct: 535 VIIYTTMISGFCRKGLKEEADA------LFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 378 GFVIFGRILPSCFTPDAVTFTSLIKILE 405
+ + F DA T + +I +L
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINMLH 616
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ R P + +++ L D +F+ + FP+ TYN L
Sbjct: 343 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I FCK RV G + + + + VT+ +LI+ L A +F K+ G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D+ TY+ L++GLC+ G AL +FE + EPD TY+ +I+G+CK
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK------MEPDIYTYNIMIEGMCKAGK 515
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C S + P V + + +I G C+ + A LF+ +
Sbjct: 516 VEDGWDLFCSLSLKGVK------PNVII------YTTMISGFCRKGLKEEADALFREMKE 563
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN TYN LIR DG D+ E L K + S G D T +++IN
Sbjct: 564 DGTLPNSGTYNTLIRARLRDG--DKAASAE----LIKEMRSCGFVGDASTISMVINMLHD 617
Query: 372 IGRVSSGFV 380
GR+ ++
Sbjct: 618 -GRLEKSYL 625
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 107/283 (37%), Gaps = 64/283 (22%)
Query: 122 FPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAA 181
+ ++ + N+L++ ++ + G +++S P V F L+ + ++ +
Sbjct: 47 YREKLSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 101
Query: 182 LFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYST 241
L +++ D+++YN LIN CR +AL + +M + G EPD +T S+
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM----KLGY--EPDIVTLSS 155
Query: 242 IIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKI 301
L++G C ++
Sbjct: 156 -----------------------------------------------LLNGYCHGKRISE 168
Query: 302 ARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYT 361
A L + PN VT+N LI GL + E L R+ + G PDL+T
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA------VALIDRMVARGCQPDLFT 222
Query: 362 YNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
Y ++N CK G + + ++ D V +T++I L
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 178/390 (45%), Gaps = 73/390 (18%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA+ +F M+ RP P + F+ L +AK K +D V+S +++ + G+ + YTYNI
Sbjct: 47 DEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 131 LINCFCKMGRVSHGFVVLGRILR-----------------------------------SC 155
+INC C+ ++S +LG++++
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 156 FTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVAL 215
+ PD VTFT+L+ L ++ EA AL ++ V GC+ D+ TY +INGLC+ G +AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 216 NLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFP 275
NL +M G E D + YST+ID LCK + L + F +
Sbjct: 226 NLLNKMEKGK------IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 276 LVRVQCLC------------------------LNFLCLIDGLCKISKLKIARELFQSLPR 311
+ + CLC + F LID K KL A +LF + +
Sbjct: 280 SL-ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
+ PN+VTYN LI G C ++DE + +F + S PD+ TYN LIN FCK
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQ------IFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+V G +F + + VT+T+LI
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 29/334 (8%)
Query: 70 PNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
P+ AL + + M + V ++ + L K +H D L+LF ++ G+ PD +TY+
Sbjct: 221 PDLALNLLNKMEKGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
LI+C C GR S +L +L P+ VTF SLI E +++EA LF ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
+ ++ TYN+LING C A +F M + + C PD +TY+T+I+G CK
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKA 393
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCL--CLNFLCLIDGLCKISKLKIARELFQ 307
++ M + + R + + + LI G + S A+ +F+
Sbjct: 394 K--------------KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 308 SLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILIN 367
+ G+ PN++TYN L+ GLC +G++ E ++F+ L + + PD+YTYNI+
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKL------EKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 368 CFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
CK G+V G+ +F + PD + + ++I
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA +FD M+ R P + ++N L D +F + PD TYN L
Sbjct: 328 EAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
IN FCK +V G + + R + VT+T+LI S A +F ++ G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
++ TYNTL++GLC+ G A+ +FE + EPD TY+ + +G+CK
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK------MEPDIYTYNIMSEGMCKAGK 500
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C S V+ + N +I G CK + A LF +
Sbjct: 501 VEDGWDLFCSLSLKG----------VKPDVIAYN--TMISGFCKKGLKEEAYTLFIKMKE 548
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +P+ TYN LIR DG D+ E L K + S D TY ++ +
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDG--DKAASAE----LIKEMRSCRFAGDASTYGLVTDMLHD 602
Query: 372 IGRVSSGFV 380
GR+ GF+
Sbjct: 603 -GRLDKGFL 610
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 27/287 (9%)
Query: 119 TGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIME 178
+GL D Y + N + ++ + G +++S P V F+ L+ + +
Sbjct: 25 SGLSYDGYREKLSRNALLHL-KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 179 AAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCEPDAI 237
+ K+ + G +++TYN +IN LCR AL + +M G G P +
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG-------PSIV 136
Query: 238 TYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKIS 297
T +++++G C N + +A + +M + Q + F L+ GL + +
Sbjct: 137 TLNSLLNGFCH----GNRIS-EAVALVDQMVEMGY-------QPDTVTFTTLVHGLFQHN 184
Query: 298 KLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFP 357
K A L + + G P++VTY +I GLC G+ D L ++ +
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD------LALNLLNKMEKGKIEA 238
Query: 358 DLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
D+ Y+ +I+ CK V +F + PD T++SLI L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 74/402 (18%)
Query: 59 SSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNL 118
SSG + I ++A+ +F M+ RP P V FN LF +AKTK Y+ VL+L K++
Sbjct: 61 SSG---LVGIKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 119 TGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIME 178
G+ YT +I+INCFC+ ++S+ F +G+I++ + PD V F +L+ LC E R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 179 AAALFTKLRVFGCELDVFTYNTLINGL--------------------------------- 205
A L ++ G + + T NTL+NGL
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 206 --CRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFL------- 256
C++G T +A+ L +M N + DA+ YS IIDGLCK+ N
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKL------DAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 257 ----------------GFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLK 300
GF + K+ ++ + F LID K KL+
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 301 IARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLY 360
A +L + + + G+ PN +TYN LI G C + +++E + + S G PD+
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI------SKGCDPDIM 404
Query: 361 TYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
T+NILIN +CK R+ G +F + + VT+ +L++
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 30/324 (9%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +F++L K L K + G+ P+ TYN LI+ FCK R+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
++ ++ PD +TF LI C +RI + LF ++ + G + TYNTL+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C++G VA LF+EM + PD ++Y ++DGLC
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRR------VRPDIVSYKILLDGLCDNG------------- 487
Query: 264 FSALNKMAFYFPLVRVQCLCLN---FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
L K F + + L+ ++ +I G+C SK+ A +LF SLP G+ +
Sbjct: 488 --ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 321 YNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFV 380
YNI+I LC + + +LF+++ G PD TYNILI ++
Sbjct: 546 YNIMISELCRKDSLSKAD------ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 381 IFGRILPSCFTPDAVTFTSLIKIL 404
+ + S F D T +I +L
Sbjct: 600 LIEEMKSSGFPADVSTVKMVINML 623
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 25/332 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+ A +F+ M ++ + + ++N L G +D L + + + P+ T+++
Sbjct: 280 DNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ F K G++ +L +++ P+ +T+ SLI C E+R+ EA + + G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C+ D+ T+N LING C+ L LF EM+ GV+ + +TY+T++ G C+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMS----LRGVI--ANTVTYNTLVQGFCQS- 451
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
K+ RV+ +++ L+DGLC +L+ A E+F +
Sbjct: 452 -----------GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
++ + ++ Y I+I G+CN ++D+ + LF L G+ D YNI+I+ C
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDA------WDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ +S ++F ++ PD +T+ LI+
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
+I+ C+ KL A + + G P+ V +N L+ GLC + ++ E L
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA------LELVD 182
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
R+ G P L T N L+N C G+VS V+ R++ + F P+ VT+ ++ ++
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 10/156 (6%)
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
S+ +G + M PL V ++F L + K + ++ L + +
Sbjct: 61 SSGLVGIKADDAVDLFRDMIQSRPLPTV----IDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G+ ++ T +I+I C + F ++ G PD +N L+N C
Sbjct: 117 KGIAHSIYTLSIMINCFC------RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL 170
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLIKILEIN 407
RVS + R++ P +T +L+ L +N
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 184/349 (52%), Gaps = 30/349 (8%)
Query: 54 KERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 113
+E+ +G ++ + ++A+ +F M+ RP P + F+ L +AK +D V+SL
Sbjct: 49 REKLSRNG---LSELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLG 104
Query: 114 KRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE 173
+++ G+ + YTY+ILINCFC+ ++ VLG++++ + P+ VT +SL+ C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 174 SRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVC 232
RI EA AL ++ V G + + T+NTLI+GL A+ L + M A G C
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-------C 217
Query: 233 EPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDG 292
+PD +TY +++GLCK + +F+ LNKM +++ L + +IDG
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTD--------LAFNLLNKM----EQGKLEPGVLIYNTIIDG 265
Query: 293 LCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNS 352
LCK + A LF+ + G+ PNVVTY+ LI LCN G+ + L +
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR------LLSDMIE 319
Query: 353 TGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ PD++T++ LI+ F K G++ ++ ++ P VT++SLI
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 32/319 (10%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
P V +N + L K KH D L+LFK + G+ P+ TY+ LI+C C GR S
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+L ++ PD TF++LI E +++EA L+ ++ + + TY++LING C
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMA 262
A +FE M + + C PD +TY+T+I G CK E G M
Sbjct: 373 MHDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEG---------ME 417
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYN 322
F +++ V + LI GL + +A+E+F+ + G+ PN++TYN
Sbjct: 418 VFREMSQRGLVGNTV-------TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 323 ILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIF 382
L+ GLC +G++ E ++F+ L + + P +YTYNI+I CK G+V G+ +F
Sbjct: 471 TLLDGLCKNGKL------EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 383 GRILPSCFTPDAVTFTSLI 401
+ PD V + ++I
Sbjct: 525 CNLSLKGVKPDVVAYNTMI 543
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ R P + +++ L D +F+ + FPD TYN L
Sbjct: 344 EAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I FCK RV G V + + + VT+ LI+ L A +F ++ G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
++ TYNTL++GLC+ G A+ +FE + EP TY+ +I+G+CK
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK------MEPTIYTYNIMIEGMCKAGK 516
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C S V+ + N +I G C+ + A LF+ +
Sbjct: 517 VEDGWDLFCNLSLKG----------VKPDVVAYN--TMISGFCRKGSKEEADALFKEMKE 564
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN YN LIR DG + + L K + S G D T ++ N
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAE------LIKEMRSCGFAGDASTIGLVTNMLHD 618
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 619 -GRLDKSFL 626
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 25/294 (8%)
Query: 111 SLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDL 170
S F R +G Y + N ++ ++ + G +++S P + F+ L+ +
Sbjct: 33 SFFWRRAFSGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 171 CAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 230
++ +L +++ G + +TY+ LIN CR +AL + +M +
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK------L 145
Query: 231 VCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLI 290
EP+ +T S++++G C ++ AL F + Q + F LI
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKR---------ISEAVALVDQMF---VTGYQPNTVTFNTLI 193
Query: 291 DGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRL 350
GL +K A L + G P++VTY +++ GLC G D F L ++
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD------LAFNLLNKM 247
Query: 351 NSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
L P + YN +I+ CK + +F + P+ VT++SLI L
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 188/414 (45%), Gaps = 83/414 (20%)
Query: 56 RCKSSGEGDITSITPN--------EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYD 107
R SSG GD I N +A+ +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 108 TVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILR-------------- 153
V+SL +++ G+ + YTYNILINCFC+ ++S +LG++++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 154 ---------------------SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
+ PD +TFT+LI L ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGS 252
++ TY ++NGLC+ G +A NL +M E + + YST+ID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKME------AAKIEANVVIYSTVIDSLCKYRHE 276
Query: 253 ANFLG-FSCMASFSALNKMAFYFPLVRVQCLC------------------------LNFL 287
+ L F+ M + + Y L + CLC + F
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSL--ISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 288 CLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLF 347
LID K KL A +L+ + + + P++ TY+ LI G C ++DE KH +F
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH------MF 388
Query: 348 KRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ + S FP++ TYN LIN FCK R+ G +F + + VT+T+LI
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 24/312 (7%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V ++ + L K +H D L+LF + G+ P+ TY+ LI+C C R S +L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF +LI E +++EA L+ ++ + D+FTY++LING C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNK 269
A ++FE M + + C P+ +TY+T+I+G CK + F +++
Sbjct: 380 RLDEAKHMFELMISKD------CFPNVVTYNTLINGFCKAKRIDEGVEL-----FREMSQ 428
Query: 270 MAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
V + LI G + A+ +F+ + G+ PN++TYN L+ GLC
Sbjct: 429 RGLVGNTV-------TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 330 NDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSC 389
+G++ E ++F+ L + + P +YTYNI+I CK G+V G+ +F +
Sbjct: 482 KNGKL------EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 390 FTPDAVTFTSLI 401
PD + + ++I
Sbjct: 536 VKPDVIIYNTMI 547
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 29/328 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++AL +F M N + RP V +++ L CL + + L + + P+ T+N
Sbjct: 277 DDALNLFTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ F K G++ + +++ PD T++SLI C R+ EA +F +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGL--CK 248
C +V TYNTLING C+ + LF EM+ + G+V + +TY+T+I G +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMS----QRGLV--GNTVTYTTLIHGFFQAR 449
Query: 249 EAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS 308
+ +A + F M S V + + L+DGLCK KL+ A +F+
Sbjct: 450 DCDNAQMV-FKQMVSDG-------------VHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
L R+ + P + TYNI+I G+C G++++ + LF L+ G+ PD+ YN +I+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDG------WDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVT 396
FC+ G +F ++ PD+ T
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 25/275 (9%)
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
IL N M ++ + G +++S P F L+ + + +L K++
Sbjct: 56 ILRNGLHSM-KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
G +++TYN LIN CR +AL L +M + EP +T S++++G C
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMK------LGYEPSIVTLSSLLNGYCHG 168
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
++ +A + +M Y P + F LI GL +K A L +
Sbjct: 169 KRISD-----AVALVDQMVEMG-YRPDT------ITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
+ G PN+VTY +++ GLC G +D F L ++ + + ++ Y+ +I+
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDID------LAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
CK +F + P+ +T++SLI L
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 82/415 (19%)
Query: 55 ERCKSSGEGDITSITPN---------EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKH 105
ER +S GD I N +A+ +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNK 98
Query: 106 YDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTS 165
++ V+SL +++ G+ D YTY+I INCFC+ ++S VL ++++ + PD VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 166 LIKDLCAESRI-----------------------------------MEAAALFTKLRVFG 190
L+ C RI EA AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C+ D+ TY T++NGLC+ G +AL+L ++M G E D + Y+TIIDGLCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYK 272
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLC------------------------LNF 286
+ L + F + + + CLC + F
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSL-ISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 287 LCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLL 346
LID K KL A +L+ + + + P++ TY+ LI G C ++DE KH +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH------M 385
Query: 347 FKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
F+ + S FP++ TY+ LI FCK RV G +F + + VT+T+LI
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 162/316 (51%), Gaps = 32/316 (10%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V +N + L K KH D L+LF ++ G+ PD +TY+ LI+C C GR S +L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF++LI E +++EA L+ ++ + D+FTY++LING C
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMASFS 265
A ++FE M + + C P+ +TYST+I G CK E G M F
Sbjct: 378 RLDEAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEG---------MELFR 422
Query: 266 ALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILI 325
+++ V + LI G + A+ +F+ + G+ PN++TYNIL+
Sbjct: 423 EMSQRGLVGNTV-------TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 326 RGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRI 385
GLC +G++ + ++F+ L + + PD+YTYNI+I CK G+V G+ +F +
Sbjct: 476 DGLCKNGKLAKA------MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 386 LPSCFTPDAVTFTSLI 401
+P+ + + ++I
Sbjct: 530 SLKGVSPNVIAYNTMI 545
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ R P + +++ L D +F+ + FP+ TY+ L
Sbjct: 346 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I FCK RV G + + + + VT+T+LI A +F ++ G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
++ TYN L++GLC+ G A+ +FE + EPD TY+ +I+G+CK
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS------TMEPDIYTYNIMIEGMCKAGK 518
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C S ++ P V + + +I G C+ + A L + +
Sbjct: 519 VEDGWELFCNLSLKGVS------PNV------IAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN TYN LIR DG + + L K + S G D T ++ N
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAE------LIKEMRSCGFAGDASTIGLVTNMLHD 620
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 621 -GRLDKSFL 628
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 24/275 (8%)
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
IL N + +V + G +++S P V F L+ + ++ +L +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
G D++TY+ IN CR +AL + +M + EPD +T S++++G C
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK------LGYEPDIVTLSSLLNGYCHS 166
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
++ +A + +M Y P F LI GL +K A L +
Sbjct: 167 KRISD-----AVALVDQMVEMG-YKPDT------FTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
+ G P++VTY ++ GLC G +D L K++ + D+ YN +I+
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDID------LALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
CK + +F + PD T++SLI L
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+ A VF M+++ P + ++NIL L K + +F+ L + + PD YTYNI
Sbjct: 450 DNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I CK G+V G+ + + +P+ + + ++I C + EA +L K++ G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEM 221
+ TYNTLI R G + L +EM
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 186/417 (44%), Gaps = 83/417 (19%)
Query: 56 RCKSSGEGDITSITPN--------EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYD 107
R SSG GD I N +A+ +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFD 102
Query: 108 TVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILR-------------- 153
V+SL +++ + YTYNILINCFC+ ++S +LG++++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 154 ---------------------SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
+ PD +TFT+LI L ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGS 252
++ TY ++NGLC+ G T +ALNL +M E D + ++TIID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHV 276
Query: 253 ANFLG-FSCMASFSALNKMAFYFPLVRVQCLC------------------------LNFL 287
+ L F M + + Y L + CLC + F
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSL--ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 288 CLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLF 347
LID K K A +L+ + + + P++ TYN L+ G C ++D+ K +F
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ------MF 388
Query: 348 KRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+ + S FPD+ TYN LI FCK RV G +F + D VT+T+LI+ L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 32/316 (10%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V FN + L K +H D L+LFK + G+ P+ TY+ LI+C C GR S +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF +LI E + +EA L+ + + D+FTYN+L+NG C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMASFS 265
A +FE M + + C PD +TY+T+I G CK E G+ F S
Sbjct: 380 RLDKAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 266 ALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILI 325
+ + LI GL A+++F+ + G+ P+++TY+IL+
Sbjct: 434 D----------------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 326 RGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRI 385
GLCN+G++ E +F + + + D+Y Y +I CK G+V G+ +F +
Sbjct: 478 DGLCNNGKL------EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 386 LPSCFTPDAVTFTSLI 401
P+ VT+ ++I
Sbjct: 532 SLKGVKPNVVTYNTMI 547
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ R P + ++N L D +F+ + FPD TYN L
Sbjct: 348 EAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I FCK RV G + + D VT+T+LI+ L + A +F ++ G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D+ TY+ L++GLC G AL +F+ M + D Y+T+I+G+CK AG
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL------DIYIYTTMIEGMCK-AG 519
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ G+ S S L V+ + + +I GLC L+ A L + +
Sbjct: 520 KVDD-GWDLFCSLS----------LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN TYN LIR DG D+ E L + + S D T ++ N
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDG--DKAASAE----LIREMRSCRFVGDASTIGLVANMLHD 622
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 623 -GRLDKSFL 630
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 183/397 (46%), Gaps = 75/397 (18%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
+ + ++A+ +F M+ RP P + F+ L +AK +D V+SL +++ G+ +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRI-------- 176
YTY+ILINCFC+ ++S VL ++++ + PD VT SL+ C +RI
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 177 ---------------------------MEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
EA AL ++ V GC+ D+ TY ++NGLC+ G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLG-FSCMASFSALN 268
+AL+L ++M G EP + Y+TIID LC + L F+ M +
Sbjct: 236 DIDLALSLLKKMEQGK------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 269 KMAFYFPLVRVQCLC------------------------LNFLCLIDGLCKISKLKIARE 304
+ Y L+R CLC + F LID K KL A +
Sbjct: 290 NVVTYNSLIR--CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
L+ + + + P++ TY+ LI G C ++DE KH +F+ + S FP++ TYN
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH------MFELMISKDCFPNVVTYNT 401
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
LI FCK RV G +F + + VT+T+LI
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 170/334 (50%), Gaps = 31/334 (9%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
P V +N + L K+ + L+LF ++ G+ P+ TYN LI C C GR S
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+L ++ P+ VTF++LI E +++EA L+ ++ + D+FTY++LING C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
A ++FE M + + C P+ +TY+T+I G CK M F
Sbjct: 373 MHDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVD-----EGMELFRE 421
Query: 267 LNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIR 326
+++ V + LI G + + A+ +F+ + G++P+++TY+IL+
Sbjct: 422 MSQRGLVGNTV-------TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 327 GLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRIL 386
GLCN+G++ ET ++F+ L + + PD+YTYNI+I CK G+V G+ +F +
Sbjct: 475 GLCNNGKV------ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 387 PSCFTPDAVTFTSLIKIL-------EINSFFRQV 413
P+ VT+T+++ E ++ FR++
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N+AL +F M N + RP V ++N L CL + L + + P+ T++
Sbjct: 273 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ F K G++ + +++ PD T++SLI C R+ EA +F +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGL--CK 248
C +V TYNTLI G C+ + LF EM+ + G+V + +TY+T+I G +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMS----QRGLV--GNTVTYTTLIHGFFQAR 445
Query: 249 EAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS 308
E +A + F M S L + + + L+DGLC K++ A +F+
Sbjct: 446 ECDNAQIV-FKQMVSDGVLPDI-------------MTYSILLDGLCNNGKVETALVVFEY 491
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
L R+ + P++ TYNI+I G+C G++++ + LF L+ G+ P++ TY +++
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDG------WDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
FC+ G +F + PD+ T+ +LI+
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 26/309 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ R P + +++ L D +F+ + FP+ TYN L
Sbjct: 344 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I FCK RV G + + + + VT+T+LI A +F ++ G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D+ TY+ L++GLC G AL +FE + EPD TY+ +I+G+CK
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK------MEPDIYTYNIMIEGMCKAGK 516
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C S V+ + + ++ G C+ + A LF+ +
Sbjct: 517 VEDGWDLFCSLSLKG------------VKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +P+ TYN LIR DG D+ E L + + S D T ++ N
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDG--DKAASAE----LIREMRSCRFVGDASTIGLVTNMLHD 618
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 619 -GRLDKSFL 626
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 26/281 (9%)
Query: 125 RYTY-NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALF 183
RY Y I IN + ++ + G +++S P V F+ L+ + ++ +L
Sbjct: 46 RYDYRKISINRLNDL-KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG 104
Query: 184 TKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTII 243
+++ G +++TY+ LIN CR +AL + +M + G EPD +T ++++
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLNSLL 158
Query: 244 DGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAR 303
+G C G + S + +M + Q F LI GL + ++ A
Sbjct: 159 NGFCH--------GNRISDAVSLVGQMV----EMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 304 ELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYN 363
L + G P++VTY I++ GLC G +D L K++ + P + YN
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID------LALSLLKKMEQGKIEPGVVIYN 260
Query: 364 ILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+I+ C V+ +F + P+ VT+ SLI+ L
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 29/334 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N+AL +F M++ RP P + F L +AK YD V+SLF+++ + G+ P T NI
Sbjct: 65 NDALDLFTRMVHSRPL-PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+++C C + LG++++ F PD VTFTSL+ C +RI +A ALF ++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK-- 248
+ +V TY TLI LC+ H A+ LF +M NG P+ +TY+ ++ GLC+
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIG 237
Query: 249 EAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS 308
G A +L M R++ + F LID K+ KL A+EL+
Sbjct: 238 RWGDAAWLLRDMMKR--------------RIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
+ + + P+V TY LI GLC G +DE + +F L +R G +P+ Y LI+
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQ---MFYLMER---NGCYPNEVIYTTLIHG 337
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
FCK RV G IF + + +T+T LI+
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 36/351 (10%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+A+ +FD +L M +P V ++ L CL K +H + + LF ++ G P+ TYN L
Sbjct: 171 DAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
+ C++GR +L +++ P+ +TFT+LI ++MEA L+ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
DVFTY +LINGLC G A +F M NG C P+ + Y+T+I G CK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCK--- 340
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVR--VQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
S + M ++ + + V + + LI G C + + +A+E+F +
Sbjct: 341 -----------SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
P++ TYN+L+ GLC +G++ E ++F+ + + ++ TY I+I
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKV------EKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK-------ILEINSFFRQV 413
CK+G+V F +F + P+ +T+T++I I E +S F+++
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +F L K L+ + ++PD +TY LIN C G +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
+ + R+ P+ V +T+LI C R+ + +F ++ G + TY LI
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
G C G VA +F +M++ PD TY+ ++DGLC
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRA------PPDIRTYNVLLDGLCCNG------------- 412
Query: 264 FSALNKMAFYFPLVRVQCLCLN---FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
+ K F +R + + +N + +I G+CK+ K++ A +LF SL G+ PNV+T
Sbjct: 413 --KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 321 YNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTY 362
Y +I G C G + E LFK++ G P+ Y
Sbjct: 471 YTTMISGFCRRGLIHEADS------LFKKMKEDGFLPNESVY 506
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 284 LNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETV 343
++F L+ + K+++ + LF+ + G+ P + T NI++ +C Q +
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF--- 140
Query: 344 FLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
++ G PDL T+ L+N +C R+ +F +IL F P+ VT+T+LI+
Sbjct: 141 ---LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 404 L 404
L
Sbjct: 198 L 198
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 29/334 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+++L +F +M+ RP P + F+ L ++K K YD V+ L++++ + G+ + T NI
Sbjct: 63 DDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
L+NCFC+ ++S LG++++ P VTF SL+ C R+ +A +F ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCEPDAITYSTIIDGLCKE 249
+ +V YNT+I+GLC++ AL+L M +G G PD +TY+++I GLC
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDVVTYNSLISGLCSS 234
Query: 250 AGSANFLGF-SCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS 308
++ SCM +P V F LID K ++ A E ++
Sbjct: 235 GRWSDATRMVSCMTKREI-------YPDV------FTFNALIDACVKEGRVSEAEEFYEE 281
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
+ R L P++VTY++LI GLC ++DE + +F + S G FPD+ TY+ILIN
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE------MFGFMVSKGCFPDVVTYSILING 335
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+CK +V G +F + + VT+T LI+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 32/349 (9%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+AL +FD M+ M +P V +N + L K+K D L L R+ G+ PD TYN L
Sbjct: 169 DALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I+ C GR S ++ + + PD TF +LI E R+ EA + ++
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
+ D+ TY+ LI GLC A +F M + C PD +TYS +I+G CK
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKK 341
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ + C S + + + + LI G C+ KL +A E+F+ +
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTI------------LIQGYCRAGKLNVAEEIFRRMVF 389
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G+ PN++TYN+L+ GLC++G++ E ++ + G+ D+ TYNI+I CK
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKI------EKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL-------EINSFFRQV 413
G V+ + I+ + PD T+T+++ L E ++ FR++
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P + ++++L L D +F + G FPD TY+ILIN +CK +V H
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 144 GFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLIN 203
G + + + + VT+T LI+ C ++ A +F ++ G ++ TYN L++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 204 GLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMAS 263
GLC G AL + +M NG + D +TY+ II G+CK A+ C +
Sbjct: 405 GLCDNGKIEKALVILADMQK-NG-----MDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 264 FSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPN 317
L P + + ++ GL K + A LF+ + G++PN
Sbjct: 459 CQGL------MPDI------WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 24/331 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+AL M N P +FN L L K H + + + G PD YTYN
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I+ CK+G V VL +++ +P+ VT+ +LI LC E+++ EA L L G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
DV T+N+LI GLC T + VA+ LFEEM + CEPD TY+ +ID LC +
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKG 449
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
L S + + + LIDG CK +K + A E+F +
Sbjct: 450 KLDEALNMLKQMELSGCARSV------------ITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
G+ N VTYN LI GLC +++ E L ++ G PD YTYN L+ FC
Sbjct: 498 VHGVSRNSVTYNTLIDGLC------KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ G + I + + PD VT+ +LI
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+E L V D+M++ +P +N + L V ++++ G+ PD T+N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI C+ ++ ++L + PD TFT++++ E + A + ++ FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C + N +++G C+ G ALN +EM+N +G F PD T++T+++GLCK
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309
Query: 251 GSANFLG--------------FSCMASFSALNKMAFYFPLVRVQCLCLNFLC-------- 288
+ + ++ + S L K+ V V + C
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 289 -LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLF 347
LI LCK ++++ A EL + L G++P+V T+N LI+GLC T+++ LF
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC------LTRNHRVAMELF 423
Query: 348 KRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ + S G PD +TYN+LI+ C G++ + ++ S +T+ +LI
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 73 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
A+ +F+ M + + P ++N+L L D L++ K++ L+G TYN LI
Sbjct: 419 AMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
+ FCK + + + + ++VT+ +LI LC R+ +AA L ++ + G +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGS 252
D +TYN+L+ CR G A ++ + M + NG CEPD +TY T+I GLCK AG
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NG-----CEPDIVTYGTLISGLCK-AGR 590
Query: 253 ANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS-LPR 311
+K+ + + + +I GL + K A LF+ L +
Sbjct: 591 V-----------EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 312 AGLMPNVVTYNILIRGLCNDG 332
P+ V+Y I+ RGLCN G
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGG 660
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA +FD M SR VT +N L L K++ + L ++ + G PD+YTYN L
Sbjct: 488 EAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
+ FC+ G + ++ + + PD VT+ +LI LC R+ A+ L +++ G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
L YN +I GL R T A+NLF EM N PDA++Y + GLC G
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE-----APPDAVSYRIVFRGLCNGGG 661
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 166/322 (51%), Gaps = 25/322 (7%)
Query: 80 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMG 139
M+ RP P + FN L +AK K +D V+SL +++ G+ + YTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 140 RVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYN 199
++S +LG++++ + P VT +SL+ C RI +A AL ++ G D T+
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 200 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFS 259
TLI+GL A+ L + M C+P+ +TY +++GLCK G +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRG------CQPNLVTYGVVVNGLCKR-GDIDL---- 168
Query: 260 CMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVV 319
+F+ LNKM +++ + F +ID LCK + A LF+ + G+ PNVV
Sbjct: 169 ---AFNLLNKM----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 320 TYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGF 379
TY+ LI LC+ G+ + + ++ K++N P+L T+N LI+ F K G+
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSD-MIEKKIN-----PNLVTFNALIDAFVKEGKFVEAE 275
Query: 380 VIFGRILPSCFTPDAVTFTSLI 401
+ ++ PD T+ SLI
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLI 297
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 32/316 (10%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V FN + L K +H D L+LFK + G+ P+ TY+ LI+C C GR S +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF +LI E + +EA L + + D+FTYN+LING C
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMASFS 265
A +FE M + + C PD TY+T+I G CK E G+ F S
Sbjct: 305 RLDKAKQMFEFMVSKD------CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 266 ALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILI 325
+ + LI GL A+++F+ + G+ P+++TY+IL+
Sbjct: 359 D----------------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 326 RGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRI 385
GLCN+G++ E +F + + + D+Y Y +I CK G+V G+ +F +
Sbjct: 403 DGLCNNGKL------EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 386 LPSCFTPDAVTFTSLI 401
P+ VT+ ++I
Sbjct: 457 SLKGVKPNVVTYNTMI 472
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 145/321 (45%), Gaps = 30/321 (9%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P + +FN L K + L + + PD +TYN LIN FC R+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 148 LG-RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+ + CF PD T+ +LIK C R+ + LF ++ G D TY TLI GL
Sbjct: 313 FEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
G A +F++M + GV PD +TYS ++DGLC L S
Sbjct: 372 HDGDCDNAQKVFKQMVSD----GV--PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 267 LNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIR 326
+ K+ Y + +I+G+CK K+ +LF SL G+ PNVVTYN +I
Sbjct: 426 I-KLDIYI-----------YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 327 GLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIG-RVSSGFVIFGRI 385
GLC+ + E + L K++ G PD TYN LI + G + +S +I R
Sbjct: 474 GLCSKRLLQEA------YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI--RE 525
Query: 386 LPSC-FTPDAVTFTSLIKILE 405
+ SC F DA T + +L
Sbjct: 526 MRSCRFVGDASTIGLVANMLH 546
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 24/247 (9%)
Query: 158 PDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNL 217
P F L+ + + +L K++ G +++TYN LIN CR +AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 218 FEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLV 277
+M + G EP +T S++++G C ++ +A + +M Y P
Sbjct: 68 LGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISD-----AVALVDQMVEMG-YRPDT 115
Query: 278 RVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDET 337
+ F LI GL +K A L + + G PN+VTY +++ GLC G +D
Sbjct: 116 ------ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID-- 167
Query: 338 KHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTF 397
F L ++ + + D+ +N +I+ CK V +F + P+ VT+
Sbjct: 168 ----LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 398 TSLIKIL 404
+SLI L
Sbjct: 224 SSLISCL 230
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 174/367 (47%), Gaps = 49/367 (13%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
+ + ++A+ +F M+ RP P + F+ L +AK +D V+SL +++ G+ +
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFT 184
YTY+I IN FC+ ++S +LG++++ + P VT SL+ C +RI EA AL
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 185 KLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIID 244
++ G + D T+ TL++GL + A+ L E M C+PD +TY +I+
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVIN 223
Query: 245 GLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARE 304
GLCK G + + + LNKM +++ + + +IDGLCK + A +
Sbjct: 224 GLCKR-GEPDL-------ALNLLNKM----EKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQ------------------------------M 334
LF + G+ P+V TYN LI LCN G+ +
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 335 DETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDA 394
E K E L + + S FPD+ YN LI FCK RV G +F + +
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 395 VTFTSLI 401
VT+T+LI
Sbjct: 392 VTYTTLI 398
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 57/365 (15%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA+ + D M+ M +P +F L L + ++L +R+ + G PD TY
Sbjct: 162 SEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+IN CK G +L ++ + D V + ++I LC + +A LF K+ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 231
+ DVFTYN LI+ LC G A L +M N +V
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 232 -----------CEPDAITYSTIIDGLCK----EAGSANFLGFSCMASFSALNKMAFYFPL 276
C PD + Y+T+I G CK E G M F +++
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG---------MEVFREMSQRGLVGNT 391
Query: 277 VRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDE 336
V + LI G + A+ +F+ + G+ P+++TYNIL+ GLCN+G +
Sbjct: 392 V-------TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV-- 442
Query: 337 TKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVT 396
ET ++F+ + + D+ TY +I CK G+V G+ +F + P+ VT
Sbjct: 443 ----ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 397 FTSLI 401
+T+++
Sbjct: 499 YTTMM 503
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 30/336 (8%)
Query: 70 PNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
P+ AL + + M + V +N + L K KH D LF ++ G+ PD +TYN
Sbjct: 231 PDLALNLLNKMEKGKI-EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKL-RV 188
LI+C C GR S +L +L PD V F +LI E +++EA L+ ++ +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 189 FGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGL-- 246
C DV YNTLI G C+ + +F EM+ + G+V + +TY+T+I G
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS----QRGLV--GNTVTYTTLIHGFFQ 403
Query: 247 CKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELF 306
++ +A + F M S V + + L+DGLC ++ A +F
Sbjct: 404 ARDCDNAQMV-FKQMVSDG-------------VHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 307 QSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILI 366
+ + + + ++VTY +I LC G++++ + LF L+ G+ P++ TY ++
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDG------WDLFCSLSLKGVKPNVVTYTTMM 503
Query: 367 NCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ FC+ G +F + P++ T+ +LI+
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 60/309 (19%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++D M+ + P V ++N L K K + + +F+ ++ GL + TY L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I+ F + + +V +++ PD +T+ L+ LC + A +F ++
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
+LD+ TY T+I LC+ G +LF ++ GV +P+ +TY+T++ G C++
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK----GV--KPNVVTYTTMMSGFCRKGL 511
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
A LF +
Sbjct: 512 KEE-----------------------------------------------ADALFVEMKE 524
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G +PN TYN LIR DG DE E L K + S G D T+ ++ N
Sbjct: 525 DGPLPNSGTYNTLIRARLRDG--DEAASAE----LIKEMRSCGFAGDASTFGLVTNMLHD 578
Query: 372 IGRVSSGFV 380
GR+ F+
Sbjct: 579 -GRLDKSFL 586
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 179/372 (48%), Gaps = 29/372 (7%)
Query: 29 EPSYPTTTATLRLTVKDRASLEQFLKERCKSSGEGDITSITPNEALCVFDYMLNMRPSRP 88
E T +LR+ S +ER +S + SI N+AL +F M P P
Sbjct: 23 EKGNLVTALSLRICNSRAFSGRSDYRERLRSG----LHSIKFNDALTLFCDMAESHP-LP 77
Query: 89 PVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVL 148
+ F+ L +AK Y+ V+SLF+ L + G+ D Y++ LI+CFC+ R+S L
Sbjct: 78 SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137
Query: 149 GRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRT 208
G++++ F P VTF SL+ C +R EA +L ++ G E +V YNT+I+ LC
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEK 197
Query: 209 GHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALN 268
G AL++ + M + G+ PD +TY+++I L + G S S +
Sbjct: 198 GQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFH----SGTWGVSARI-LSDMM 246
Query: 269 KMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGL 328
+M P V + F LID K +L A++ + + + + PN+VTYN LI GL
Sbjct: 247 RMGIS-PDV------ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 329 CNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPS 388
C G +DE K V + S G FP+ TYN LIN +CK RV G I +
Sbjct: 300 CIHGLLDEAKKVLNVLV------SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 389 CFTPDAVTFTSL 400
D T+ +L
Sbjct: 354 GVDGDTFTYNTL 365
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 25/341 (7%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA+ + D ++ + P V +N + L + +T L + K + G+ PD TYN L
Sbjct: 167 EAMSLVDQIVGL-GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I G +L ++R +PD +TF++LI E +++EA + ++
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
++ TYN+LINGLC G A + + + G F P+A+TY+T+I+G CK
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS-KGFF-----PNAVTYNTLINGYCKAKR 339
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ + C+ S ++ F + L G C+ K A ++ +
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYN------------TLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G+ P++ T+NIL+ GLC+ G++ + + + L + + TYNI+I CK
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKA------LVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLIKILEINSFFRQ 412
+V + +F + +PD +T+ +++ L +R+
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 20/246 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA ++ M+ R P + ++N L L D + L G FP+ TYN L
Sbjct: 272 EAKKQYNEMIQ-RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
IN +CK RV G +L + R D T+ +L + C + A + ++ G
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D++T+N L++GLC G AL E++ G+ ITY+ II GLCK
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI------ITYNIIIKGLCKADK 444
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
+ C + ++ P V + ++ ++ GL + + A EL++ + +
Sbjct: 445 VEDAWYLFCSLALKGVS------PDV------ITYITMMIGLRRKRLWREAHELYRKMQK 492
Query: 312 A-GLMP 316
GLMP
Sbjct: 493 EDGLMP 498
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 235 DAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLC 294
D +++T+ID C+ A + L SC+ + K+ F +V F L++G C
Sbjct: 113 DLYSFTTLIDCFCRCARLS--LALSCLGK---MMKLGFEPSIV-------TFGSLVNGFC 160
Query: 295 KISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTG 354
+++ A L + G PNVV YN +I LC GQ++ T + K + G
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN------TALDVLKHMKKMG 214
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
+ PD+ TYN LI G I ++ +PD +TF++LI +
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 298 KLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFP 357
K A LF + + +P++V ++ L+ + + YE V LF+ L G+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIA------KLNKYEAVISLFRHLEMLGISH 112
Query: 358 DLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK-ILEINSFFRQVA 414
DLY++ LI+CFC+ R+S G+++ F P VTF SL+ +N F+ ++
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 270 MAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
MA PL + ++F L+ + K++K + LF+ L G+ ++ ++ LI C
Sbjct: 70 MAESHPLPSI----VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC 125
Query: 330 NDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSC 389
++ ++ G P + T+ L+N FC + R + +I+
Sbjct: 126 RCARL------SLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 390 FTPDAVTFTSLIKIL 404
+ P+ V + ++I L
Sbjct: 180 YEPNVVIYNTIIDSL 194
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 180/397 (45%), Gaps = 75/397 (18%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
++ I ++A+ +F M RP P + F+ L +AK +D V+S +++ + G+ +
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112
Query: 125 RYTYNILINCFC----------------KMG-------------------RVSHGFVVLG 149
YTYNILINCFC K+G R+S ++
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
+++ + PD VTFT+LI L ++ EA AL ++ GC+ D+ TY ++NGLC+ G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLG-FSCMASFSALN 268
T +ALNL +M E + + YST+ID LCK + L F+ M +
Sbjct: 233 DTDLALNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 269 KMAFYFPLVRVQCLC------------------------LNFLCLIDGLCKISKLKIARE 304
+ Y L + CLC + F LID K KL A +
Sbjct: 287 NVITYSSL--ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
L++ + + + PN+ TY+ LI G C ++ E K + + + P++ TYN
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ------MLELMIRKDCLPNVVTYNT 398
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
LIN FCK RV G +F + + VT+T+LI
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 24/293 (8%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V ++ + L K +H D L+LF + G+ P+ TY+ LI+C C GR S +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ P+ VTF++LI + ++++A L+ ++ + ++FTY++LING C
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNK 269
A + E M + C P+ +TY+T+I+G CK M F +++
Sbjct: 373 RLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVD-----KGMELFREMSQ 421
Query: 270 MAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
V + LI G + A+ +F+ + G+ PN++TYNIL+ GLC
Sbjct: 422 RGLVGNTV-------TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 330 NDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIF 382
+G++ + ++F+ L + + PD+YTYNI+I CK G+ G + F
Sbjct: 475 KNGKLAKA------MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 19/263 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++AL +F M N + RP V +++ L CL + L + + P+ T++
Sbjct: 270 DDALNLFTEMEN-KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ F K G++ + +++ P+ T++SLI C R+ EA + +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C +V TYNTLING C+ + LF EM+ + G+V + +TY+T+I G
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMS----QRGLV--GNTVTYTTLIHGF---- 438
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
F C + +M V V L + L+DGLCK KL A +F+ L
Sbjct: 439 ----FQARDCDNAQMVFKQMVS----VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 311 RAGLMPNVVTYNILIRGLCNDGQ 333
R+ + P++ TYNI+I G+C G+
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGK 513
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 24/247 (9%)
Query: 158 PDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNL 217
P + F+ L+ + ++ + K+ + G +++TYN LIN CR +AL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 218 FEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLV 277
+M + G EPD +T +++++G C ++ +A + +M + V
Sbjct: 136 LGKMM----KLGY--EPDIVTLNSLLNGFCHGNRISD-----AVALVDQMVEMGYKPDTV 184
Query: 278 RVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDET 337
F LI GL +K A L + + G P++VTY ++ GLC G D
Sbjct: 185 -------TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD-- 235
Query: 338 KHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTF 397
L ++ + + ++ Y+ +I+ CK +F + P+ +T+
Sbjct: 236 ----LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 398 TSLIKIL 404
+SLI L
Sbjct: 292 SSLISCL 298
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+ A VF M+++ P + ++NIL L K + +F+ L + + PD YTYNI
Sbjct: 445 DNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 131 LINCFCKMGRVSHG 144
+I CK G+ G
Sbjct: 504 MIEGMCKAGKWKMG 517
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 26/344 (7%)
Query: 62 EGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGL 121
G +T ++A V M+ P V ++N L K L + + G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 122 FPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAA 181
P+ Y+Y IL++ FCK+G++ + VL + P+ V F LI C E RI EA
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 182 LFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYST 241
+F ++ GC+ DV+T+N+LI+GLC AL L +M + GVV + +TY+T
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTVTYNT 534
Query: 242 IIDGLCKEAGSANFLGFSCMASFSALNKMAFY-FPLVRVQCLCLNFLCLIDGLCKISKLK 300
+I+ + + +N+M F PL + + LI GLC+ ++
Sbjct: 535 LINAFLRRG--------EIKEARKLVNEMVFQGSPLDEI-----TYNSLIKGLCRAGEVD 581
Query: 301 IARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLY 360
AR LF+ + R G P+ ++ NILI GLC G ++E ++ +L G PD+
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL------RGSTPDIV 635
Query: 361 TYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
T+N LIN C+ GR+ G +F ++ PD VTF +L+ L
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 165/383 (43%), Gaps = 60/383 (15%)
Query: 73 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
A VF ML+ R P + +F ++ D+ LSL + + G P+ Y LI
Sbjct: 201 AANVFYDMLS-RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
+ K RV+ +L + PDA TF +I LC RI EAA + ++ + G
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEE----------------------------MANG 224
D TY L+NGLC+ G A +LF +++
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 225 NGEFGVVCEPDAITYSTIIDGLCKEA--GSA--------------NFLGFSCMAS-FSAL 267
+G+V PD TY+++I G KE G A N ++ + F L
Sbjct: 380 VTSYGIV--PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 268 NKMAFYFPLVR------VQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTY 321
K+ + ++ ++ + F CLI CK ++ A E+F+ +PR G P+V T+
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 322 NILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVI 381
N LI GLC ++DE KH L + + S G+ + TYN LIN F + G + +
Sbjct: 498 NSLISGLC---EVDEIKH---ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 382 FGRILPSCFTPDAVTFTSLIKIL 404
++ D +T+ SLIK L
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGL 574
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 92 SFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRI 151
++N L L + D SLF+++ G P + NILIN C+ G V +
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 152 LRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHT 211
+ TPD VTF SLI LC RI + +F KL+ G D T+NTL++ LC+ G
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 212 IVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
A L +E E G V P+ T+S ++ + +
Sbjct: 686 YDACLLLDEGI----EDGFV--PNHRTWSILLQSIIPQ 717
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 45 DRASLEQFLKERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTK 104
D + +K C++ GE D +A +F+ ML P S NIL L ++
Sbjct: 563 DEITYNSLIKGLCRA-GEVD-------KARSLFEKMLR-DGHAPSNISCNILINGLCRSG 613
Query: 105 HYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFT 164
+ + K + L G PD T+N LIN C+ GR+ G + ++ PD VTF
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 165 SLIKDLCAESRIMEAAALFTK 185
+L+ LC + +A L +
Sbjct: 674 TLMSWLCKGGFVYDACLLLDE 694
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
E F + +R S P + +FN L L + + L++F++L G+ PD T+N L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAES 174
++ CK G V ++L + F P+ T++ L++ + +
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 40/346 (11%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A+ FDYM+ RP V N + G + D +SL++++ + + + Y++NI
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRI-------------- 176
LI CFC ++S G++ + F PD VTF +L+ LC E RI
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 177 -MEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPD 235
+EA ALF ++ G V T+NTLINGLC G + A L +M G G D
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHID 260
Query: 236 AITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCK 295
+TY TI++G+CK + SALN ++ ++ + + +ID LCK
Sbjct: 261 VVTYGTIVNGMCKMGDTK-----------SALNLLS-KMEETHIKPDVVIYSAIIDRLCK 308
Query: 296 ISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGL 355
A+ LF + G+ PNV TYN +I G C+ G+ + + L + + +
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR------LLRDMIEREI 362
Query: 356 FPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
PD+ T+N LI+ K G++ + +L C PD VT+ S+I
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 151/354 (42%), Gaps = 69/354 (19%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+P V ++ + L K H+ LF + G+ P+ +TYN +I+ FC GR S
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 147 VL-----------------------------------GRILRSCFTPDAVTFTSLIKDLC 171
+L +L C PD VT+ S+I C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
+R +A +F + DV T+NT+I+ CR + L E++ G+V
Sbjct: 413 KHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR----GLV 464
Query: 232 CEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLC--- 288
+ TY+T+I G C+ LN F + +C + +
Sbjct: 465 --ANTTTYNTLIHGFCE---------------VDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
L+ G C+ KL+ A ELF+ + + + + V YNI+I G+C ++DE + LF
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA------WDLFC 561
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
L G+ PD+ TYN++I+ FC +S V+F ++ + PD T+ +LI+
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 65/309 (21%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A +FD M + P V +FN + + K D + L + ++ GL + TYN
Sbjct: 418 DDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ FC++ ++ + ++ PD +T L+ C ++ EA LF +++
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+LD YN +I+G+C+ A +LF + GV EPD TY+ +I G C ++
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI----HGV--EPDVQTYNVMISGFCGKS 586
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
++ A LF +
Sbjct: 587 AISD-----------------------------------------------ANVLFHKMK 599
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
G P+ TYN LIRG G++D++ L + S G D +T ++ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKS------IELISEMRSNGFSGDAFTIKMVADLIT 653
Query: 371 KIGRVSSGF 379
GR+ F
Sbjct: 654 D-GRLDKSF 661
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 295 KISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTG 354
++++ +A L++ + + N+ ++NILI+ C+ ++ + F +L G
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS------LSTFGKLTKLG 171
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
PD+ T+N L++ C R+S +FG ++ + F F +++I
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 27/336 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTG---LFPDRYT 127
+A VFD +L R + N +A+ V S + R+ G + PD T
Sbjct: 32 EDARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCT 89
Query: 128 YNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAAL-FTKL 186
Y ILI C C+ GR+ GF LG +++ F DA+ FT L+K LCA+ R +A + ++
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 187 RVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGL 246
GC +VF+YN L+ GLC + AL L MA+ + G PD ++Y+T+I+G
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD---DRGGGSPPDVVSYTTVINGF 206
Query: 247 CKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELF 306
KE S ++S ++M L V + + +I LCK + A E+
Sbjct: 207 FKEGDSDK--------AYSTYHEMLDRGILPDV----VTYNSIIAALCKAQAMDKAMEVL 254
Query: 307 QSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILI 366
++ + G+MP+ +TYN ++ G C+ GQ E + K++ S G+ PD+ TY++L+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF------LKKMRSDGVEPDVVTYSLLM 308
Query: 367 NCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ CK GR IF + P+ T+ +L++
Sbjct: 309 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 24/318 (7%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
P F+IL AK D + +F ++ GL P+ TY +I CK GRV +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+++ +P + + SLI LC ++ A L ++ G L+ +N++I+ C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
+ G I + LFE M GV +P+ ITY+T+I+G C AG + M S
Sbjct: 488 KEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCL-AGKMD----EAMKLLSG 536
Query: 267 LNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIR 326
+ V ++ + + LI+G CKIS+++ A LF+ + +G+ P+++TYNI+++
Sbjct: 537 MVS-------VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 327 GLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRIL 386
GL +T+ L+ R+ +G +L TYNI+++ CK +F +
Sbjct: 590 GLF------QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 387 PSCFTPDAVTFTSLIKIL 404
+A TF +I L
Sbjct: 644 LMDLKLEARTFNIMIDAL 661
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 158/385 (41%), Gaps = 60/385 (15%)
Query: 71 NEALCVFDYMLNMRP--SRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTY 128
EAL + M + R S P V S+ + K D S + + G+ PD TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234
Query: 129 NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRV 188
N +I CK + VL ++++ PD +T+ S++ C+ + EA K+R
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 189 FGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK 248
G E DV TY+ L++ LC+ G + A +F+ M +P+ TY T++ G
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEITTYGTLLQGYAT 348
Query: 249 EAGSANFLG----------------FSCM----ASFSALNKMAFYFPLVRVQCL---CLN 285
+ G FS + A +++ F +R Q L +
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKH------ 339
+ +I LCK +++ A F+ + GL P + YN LI GLC + + +
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 340 -----YETVFL------------------LFKRLNSTGLFPDLYTYNILINCFCKIGRVS 376
T+F LF+ + G+ P++ TYN LIN +C G++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 377 SGFVIFGRILPSCFTPDAVTFTSLI 401
+ ++ P+ VT+++LI
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLI 553
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 27/328 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A+ VF M + P ++ + G L K+ + + F+++ GL P YN
Sbjct: 388 DQAMLVFSKM-RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ C + ++ +L + + F S+I C E R++E+ LF + G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+ +V TYNTLING C G A+ L M + V +P+ +TYST+I+G CK +
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNTVTYSTLINGYCKIS 560
Query: 251 GSANFLG-FSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
+ L F M S V + + ++ GL + + A+EL+ +
Sbjct: 561 RMEDALVLFKEMESSG-------------VSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
+G + TYNI++ GLC + D+ +F+ L L + T+NI+I+
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDA------LQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTF 397
K+GR +F + P+ T+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 24/293 (8%)
Query: 112 LFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLC 171
LF+ + G+ P+ TYN LIN +C G++ +L ++ P+ VT+++LI C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
SR+ +A LF ++ G D+ TYN ++ GL +T T A L+ + E G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT----ESGTQ 613
Query: 232 CEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLID 291
E TY+ I+ GLCK N L + F L L+ ++ F +ID
Sbjct: 614 IELS--TYNIILHGLCK-----NKLTDDALQMFQNL-------CLMDLKLEARTFNIMID 659
Query: 292 GLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLN 351
L K+ + A++LF + GL+PN TY ++ + G ++E LF +
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ------LFLSME 713
Query: 352 STGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
G D N ++ + G ++ I F+ +A T + I +L
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 31/330 (9%)
Query: 76 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCF 135
VF ML + S P V ++NIL + D L+LF ++ G P+ TYN LI+ +
Sbjct: 192 VFKEMLESQVS-PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 136 CKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDV 195
CK+ ++ GF +L + P+ +++ +I LC E R+ E + + T++ G LD
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 196 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANF 255
TYNTLI G C+ G+ AL + EM G+ P ITY+++I +CK AG+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEML----RHGLT--PSVITYTSLIHSMCK-AGN--- 360
Query: 256 LGFSCMASFSALNKMAFYFPLVRVQCLCLN---FLCLIDGLCKISKLKIARELFQSLPRA 312
+N+ + +RV+ LC N + L+DG + + A + + +
Sbjct: 361 -----------MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 313 GLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKI 372
G P+VVTYN LI G C G+M E + + + GL PD+ +Y+ +++ FC+
Sbjct: 410 GFSPSVVTYNALINGHCVTGKM------EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 373 GRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
V + ++ PD +T++SLI+
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 20/338 (5%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
NEA V M N P V ++N L T + +++ + + GL PD +Y+
Sbjct: 397 NEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+++ FC+ V V ++ PD +T++SLI+ C + R EA L+ ++ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
D FTY LIN C G AL L EM E GV+ PD +TYS +I+GL K++
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQS 569
Query: 251 GS--ANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNF---LCLIDGLCKISKLKIAREL 305
+ A L S + + Y L+ C + F + LI G C + A ++
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVT-YHTLIE-NCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNIL 365
F+S+ P+ YNI+I G C G + + L+K + +G T L
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDI------RKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 366 INCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKI 403
+ K G+V+ + +L SC +A L++I
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 47/365 (12%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N A+ D M +R P ++ L ++ + + + + +N G P TYN
Sbjct: 362 NRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LIN C G++ VL + +PD V++++++ C + EA + ++ G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+ D TY++LI G C T A +L+EEM V PD TY+ +I+ C E
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEM------LRVGLPPDEFTYTALINAYCMEG 534
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
L N+M L V + + LI+GL K S+ + A+ L L
Sbjct: 535 DLEKALQLH--------NEMVEKGVLPDV----VTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 311 RAGLMPNVVTYNI---------------LIRGLCNDGQMDETKHYETVFLLFKRLNSTGL 355
+P+ VTY+ LI+G C G M E +F+ +
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ------VFESMLGKNH 636
Query: 356 FPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL-------EINS 408
PD YNI+I+ C+ G + + ++ ++ S F VT +L+K L E+NS
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 409 FFRQV 413
V
Sbjct: 697 VIVHV 701
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 287 LCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLL 346
L LID I L A G MP V++YN ++ D + ++ +
Sbjct: 147 LSLIDKALSIVHLAQAH---------GFMPGVLSYNAVL-----DATIRSKRNISFAENV 192
Query: 347 FKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI----K 402
FK + + + P+++TYNILI FC G + +F ++ P+ VT+ +LI K
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 403 ILEINSFFR 411
+ +I+ F+
Sbjct: 253 LRKIDDGFK 261
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 33/320 (10%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V ++N++ K + LS+ R++++ PD TYN ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 148 LGRIL-RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
L R+L R C+ PD +T+T LI+ C +S + A L ++R GC DV TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
+ G A+ +M + C+P+ IT++ I+ +C M +
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTG--------RWMDAEKL 331
Query: 267 LNKM--AFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
L M + P V + F LI+ LC+ L A ++ + +P+ G PN ++YN L
Sbjct: 332 LADMLRKGFSPSV------VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
+ G C + +MD Y +R+ S G +PD+ TYN ++ CK G+V I +
Sbjct: 386 LHGFCKEKKMDRAIEY------LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 385 ILPSCFTPDAVTFTSLIKIL 404
+ +P +T+ ++I L
Sbjct: 440 LSSKGCSPVLITYNTVIDGL 459
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 30/320 (9%)
Query: 85 PSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHG 144
P P T+ F L KT+ +L + L +G PD TYN++I+ +CK G +++
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 145 FVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLING 204
VL R+ +PD VT+ ++++ LC ++ +A + ++ C DV TY LI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 205 LCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASF 264
CR A+ L +EM + C PD +TY+ +++G+CKE + F
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKF------ 296
Query: 265 SALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
LN M P Q + ++ +C + A +L + R G P+VVT+NIL
Sbjct: 297 --LNDM----PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
I LC G + + +++ G P+ +YN L++ FCK ++ R
Sbjct: 351 INFLCRKGLLGR------AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 385 ILPSCFTPDAVTFTSLIKIL 404
++ PD VT+ +++ L
Sbjct: 405 MVSRGCYPDIVTYNTMLTAL 424
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 29/332 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+A+ V D ML R P V ++ IL + + L + G PD TYN+L
Sbjct: 222 QAMEVLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
+N CK GR+ L + S P+ +T +++ +C+ R M+A L + G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
V T+N LIN LCR G A+++ E+M C+P++++Y+ ++ G CKE
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHGFCKEKK 394
Query: 252 SANFLGFSCMASFSALNKMAFY--FPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
+ + L +M +P + + + ++ LCK K++ A E+ L
Sbjct: 395 MDRAIEY--------LERMVSRGCYPDI------VTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
G P ++TYN +I GL G+ + L + + L PD TY+ L+
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGK------AIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ G+V F P+AVTF S++
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 41/366 (11%)
Query: 52 FLKERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLS 111
++ C+ SG G A+ + D M + R P V ++N+L + K D +
Sbjct: 245 LIEATCRDSGVG--------HAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 112 LFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLC 171
+ +G P+ T+NI++ C GR +L +LR F+P VTF LI LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
+ + A + K+ GC+ + +YN L++G C+ A+ E M +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------ 409
Query: 232 CEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFY--FPLVRVQCLCLNFLCL 289
C PD +TY+T++ LCK+ + + LN+++ P++ + + +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVED--------AVEILNQLSSKGCSPVL------ITYNTV 455
Query: 290 IDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKR 349
IDGL K K A +L + L P+ +TY+ L+ GL +G++DE + F F+R
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF---FHEFER 512
Query: 350 LNSTGLFPDLYTYNILINCFCKIGRVSSG--FVIFGRILPSCFTPDAVTFTSLIKILEIN 407
+ G+ P+ T+N ++ CK + F++F ++ P+ ++T LI+ L
Sbjct: 513 M---GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF--MINRGCKPNETSYTILIEGLAYE 567
Query: 408 SFFRQV 413
++
Sbjct: 568 GMAKEA 573
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 134/302 (44%), Gaps = 39/302 (12%)
Query: 105 HYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFT 164
HY +V S F D + N L + G + GF L ++ PD + T
Sbjct: 90 HYSSVNSSFA-------LEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCT 141
Query: 165 SLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANG 224
+LI+ C + +AA + L G DV TYN +I+G C+ G AL++ + M+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 225 NGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFY--FPLVRVQCL 282
PD +TY+TI+ LC + L++M +P V
Sbjct: 200 -------VSPDVVTYNTILRSLCDSG--------KLKQAMEVLDRMLQRDCYPDV----- 239
Query: 283 CLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYET 342
+ + LI+ C+ S + A +L + G P+VVTYN+L+ G+C +G++DE +
Sbjct: 240 -ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF-- 296
Query: 343 VFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ S+G P++ T+NI++ C GR + +L F+P VTF LI
Sbjct: 297 ----LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 403 IL 404
L
Sbjct: 353 FL 354
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 29/303 (9%)
Query: 100 LAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPD 159
+ +T + + + G PD LI FC++G+ +L + S PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 160 AVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFE 219
+T+ +I C I A ++ ++ V DV TYNT++ LC +G A+ + +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 220 EMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRV 279
M + C PD ITY+ +I+ C+++G + + L++M V
Sbjct: 229 RMLQRD------CYPDVITYTILIEATCRDSGVGHAMKL--------LDEMRDRGCTPDV 274
Query: 280 QCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQ-MDETK 338
+ + L++G+CK +L A + +P +G PNV+T+NI++R +C+ G+ MD K
Sbjct: 275 ----VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 339 HYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFT 398
L + G P + T+NILIN C+ G + I ++ P+++++
Sbjct: 331 -------LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 399 SLI 401
L+
Sbjct: 384 PLL 386
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V +FNIL L + + + +++ G P+ +YN L++ FCK ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 148 LGRIL-RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
L R++ R C+ PD VT+ +++ LC + ++ +A + +L GC + TYNT+I+GL
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGF-------- 258
+ G T A+ L +EM + +PD ITYS+++ GL +E + F
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 259 ---------SCMASF--SALNKMAFYFPLVRVQCLC----LNFLCLIDGLCKISKLKIAR 303
S M S A F + + C ++ LI+GL K A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 304 ELFQSLPRAGLM 315
EL L GLM
Sbjct: 575 ELLNELCNKGLM 586
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 333 QMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTP 392
QM T E F + + G PD+ LI FC++G+ I + S P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 393 DAVTFTSLI----KILEINS 408
D +T+ +I K EIN+
Sbjct: 171 DVITYNVMISGYCKAGEINN 190
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 26/336 (7%)
Query: 68 ITPNEALCVFDYMLNMRPSR--PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDR 125
+ E + V+ ++ M + P V +FNIL L ++ L +++ +G P
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 126 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTK 185
TYN +++ +CK GR +L + D T+ LI DLC +RI + L
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 186 LRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDG 245
+R + TYNTLING G ++A L EM + FG+ P+ +T++ +IDG
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS----FGL--SPNHVTFNALIDG 342
Query: 246 LCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAREL 305
E +F KM + + +++ L+DGLCK ++ +AR
Sbjct: 343 HISE------------GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNIL 365
+ + R G+ +TY +I GLC +G +DE +L ++ G+ PD+ TY+ L
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA------VVLLNEMSKDGIDPDIVTYSAL 444
Query: 366 INCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
IN FCK+GR + I RI +P+ + +++LI
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 147/342 (42%), Gaps = 29/342 (8%)
Query: 62 EGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGL 121
+G I+ EAL +F YM+ + P S+ +L L K +D + R+ G+
Sbjct: 341 DGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399
Query: 122 FPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAA 181
R TY +I+ CK G + V+L + + PD VT+++LI C R A
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459
Query: 182 LFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCEPDAITYS 240
+ ++ G + Y+TLI CR G A+ ++E M G+ D T++
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFN 512
Query: 241 TIIDGLCKEAGSANFLGF-SCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKL 299
++ LCK A F CM S L ++F CLI+G +
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPN-------------TVSFDCLINGYGNSGEG 559
Query: 300 KIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDL 359
A +F + + G P TY L++GLC G + E + + K L++ D
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF------LKSLHAVPAAVDT 613
Query: 360 YTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
YN L+ CK G ++ +FG ++ PD+ T+TSLI
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 182/450 (40%), Gaps = 74/450 (16%)
Query: 30 PSYPTTTATLRLTVK--DRASLEQFLKERCKSSGEGDITS--ITPNEALCV---FD---- 78
PS T A L VK + S+ FLKE K D+ + I N LC F+
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN-VLCAEGSFEKSSY 214
Query: 79 YMLNMRPS--RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFC 136
M M S P + ++N + K + + L + G+ D TYN+LI+ C
Sbjct: 215 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 274
Query: 137 KMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVF 196
+ R++ G+++L + + P+ VT+ +LI E +++ A+ L ++ FG +
Sbjct: 275 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 334
Query: 197 TYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANF 255
T+N LI+G G+ AL +F M A G P ++Y ++DGLCK A
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 256 LGF--------SCMASFS------ALNKMAFYFPLV---------RVQCLCLNFLCLIDG 292
GF C+ + L K F V + + + LI+G
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 293 LCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDET-KHYETVFL------ 345
CK+ + K A+E+ + R GL PN + Y+ LI C G + E + YE + L
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 346 ----------------------LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFG 383
+ + S G+ P+ +++ LIN + G F +F
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 384 RILPSCFTPDAVTFTSLIKILEINSFFRQV 413
+ P T+ SL+K L R+
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 147/358 (41%), Gaps = 39/358 (10%)
Query: 59 SSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNL 118
+SGEG +A VFD M + P ++ L L K H K L+
Sbjct: 555 NSGEG-------LKAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 119 TGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIME 178
D YN L+ CK G ++ + G +++ PD+ T+TSLI LC + + +
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 179 AAALFTKLRVFGCEL-DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAI 237
A + G L + Y ++G+ + G + E+M N + PD +
Sbjct: 667 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIV 720
Query: 238 TYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN---FLCLIDGLC 294
T + +ID G+S M N + P + Q N + L+ G
Sbjct: 721 TTNAMID------------GYSRMGKIEKTNDL---LPEMGNQNGGPNLTTYNILLHGYS 765
Query: 295 KISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTG 354
K + + L++S+ G++P+ +T + L+ G+C E+ E + K G
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC------ESNMLEIGLKILKAFICRG 819
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKILEINSFFRQ 412
+ D YT+N+LI+ C G ++ F + + + D T +++ +L N F++
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 30/320 (9%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P +T++NIL +K K T L++ + L G+ PD+ T + L+ C+ + G +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
L + D TF LI CA I A L + G LD T + +++ L R
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSAL 267
+ + EM+ P++ Y +I+GLC+ +F
Sbjct: 872 NHRFQESRMVLHEMSKQG------ISPESRKYIGLINGLCRVG--------DIKTAFVVK 917
Query: 268 NKMAFYF---PLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
+M + P V ++ L K K A L + + + L+P + ++ L
Sbjct: 918 EEMIAHKICPPNVAES-------AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
+ C +G + E V +++ GL DL +YN+LI C G ++ F ++
Sbjct: 971 MHLCCKNGNVIEALELRVV------MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 385 ILPSCFTPDAVTFTSLIKIL 404
+ F +A T+ +LI+ L
Sbjct: 1025 MKGDGFLANATTYKALIRGL 1044
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 70 PNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
+EA + +ML M+ P + SF L K + L L ++ GL D +YN
Sbjct: 945 ADEATLLLRFMLKMKLV-PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTK 185
+LI C G ++ F + + F +A T+ +LI+ L A A + K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 154/356 (43%), Gaps = 55/356 (15%)
Query: 80 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMG 139
++ ++ P V S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 140 RVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYN 199
+++ ++R PD V +T+LI C I A+ F ++ DV TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 200 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFS 259
+I+G C+ G + A LF EM F EPD++T++ +I+G CK +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKD----- 439
Query: 260 CMASFSALNKMAFYFPLVRVQCLC----LNFLCLIDGLCKISKLKIARELFQSLPRAGLM 315
+F N M +Q C + + LIDGLCK L A EL + + GL
Sbjct: 440 ---AFRVHNHM--------IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 316 PNVVTYNILIRGLCNDGQMDET----KHYETVFL-------------------------L 346
PN+ TYN ++ GLC G ++E +E L +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 347 FKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
K + GL P + T+N+L+N FC G + G + +L P+A TF SL+K
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 34/317 (10%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V S+NI+ + + L + L G PD +Y+ ++N +C+ G + + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
+ R P++ + S+I LC ++ EA F+++ G D Y TLI+G C+ G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK-----EAGSANFLGFSCMASF 264
A F EM + + PD +TY+ II G C+ EAG F C
Sbjct: 366 DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKL-FHEMFCKG-- 416
Query: 265 SALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
++ + F LI+G CK +K A + + +AG PNVVTY L
Sbjct: 417 --------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
I GLC +G +D L + GL P+++TYN ++N CK G + + G
Sbjct: 463 IDGLCKEGDLDSANE------LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 385 ILPSCFTPDAVTFTSLI 401
+ D VT+T+L+
Sbjct: 517 FEAAGLNADTVTYTTLM 533
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 147/368 (39%), Gaps = 58/368 (15%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+P + + G L + F + G+ PD Y LI+ FCK G +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+ TPD +T+T++I C ++EA LF ++ G E D T+ LING C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG--SANFL-------- 256
+ GH A + M C P+ +TY+T+IDGLCKE SAN L
Sbjct: 433 KAGHMKDAFRVHNHMIQAG------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 257 -------------GFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAR 303
G + K+ F + + + L+D CK ++ A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 304 ELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDE-----------------------TKHY 340
E+ + + GL P +VT+N+L+ G C G +++ K Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 341 ------ETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDA 394
+ ++K + S G+ PD TY L+ CK + + +F + F+
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 395 VTFTSLIK 402
T++ LIK
Sbjct: 667 STYSVLIK 674
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 145/349 (41%), Gaps = 37/349 (10%)
Query: 73 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
A F Y ++ R P V ++ + + LF + GL PD T+ LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
N +CK G + F V ++++ +P+ VT+T+LI LC E + A L ++ G +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-CEPDAITYSTIIDGLCK--E 249
++FTYN+++NGLC++G+ A+ L GEF D +TY+T++D CK E
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLV-------GEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 250 AGSANFL---------------------GFSCMASFSALNKMAFYFPLVRVQCLCLNFLC 288
A + GF K+ + + F
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
L+ C + LK A +++ + G+ P+ TY L++G C M E + LF+
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA------WFLFQ 655
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTF 397
+ G + TY++LI F K + +F ++ D F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 27/289 (9%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+A V ++M+ S P V ++ L L K D+ L + GL P+ +TYN
Sbjct: 438 KDAFRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
++N CK G + ++G + D VT+T+L+ C + +A + ++ G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLC-KE 249
+ + T+N L+NG C G L E++ N G+ P+A T+++++ C +
Sbjct: 557 LQPTIVTFNVLMNGFCLHG----MLEDGEKLLNWMLAKGIA--PNATTFNSLVKQYCIRN 610
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
A + M S Y LV+ G CK +K A LFQ +
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVK-------------GHCKARNMKEAWFLFQEM 657
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPD 358
G +V TY++LI+G + E + +F ++ GL D
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEARE------VFDQMRREGLAAD 700
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
+F+ P G+ NV +YNI+I +C G++ E H LL L G PD+ +Y+
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH----LLLLMELK--GYTPDVISYST 286
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
++N +C+ G + + + + P++ + S+I +L
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 156/325 (48%), Gaps = 31/325 (9%)
Query: 80 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMG 139
++ P +T N+++G +K + + L K +N GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN-EGLEPDSYTYNTLIAGYCKGG 335
Query: 140 RVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYN 199
V ++G + + F PD T+ SLI LC E A ALF + G + +V YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 200 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFS 259
TLI GL G + A L EM+ E G++ P+ T++ +++GLCK
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCK---------MG 440
Query: 260 CMASFSALNKMAF---YFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMP 316
C++ L K+ YFP + F LI G K++ A E+ + G+ P
Sbjct: 441 CVSDADGLVKVMISKGYFPDI------FTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 317 NVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVS 376
+V TYN L+ GLC +T +E V +K + G P+L+T+NIL+ C+ ++
Sbjct: 495 DVYTYNSLLNGLC------KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 377 SGFVIFGRILPSCFTPDAVTFTSLI 401
+ + PDAVTF +LI
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLI 573
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 155/326 (47%), Gaps = 28/326 (8%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
+++FN L L K L ++ G+ P+ +TYN+ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
++ PD +T+ +LI LC S+ EA K+ G E D +TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 210 HTIVALNLFEEMANGNGEF-GVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFS-AL 267
+A E G+ F G V PD TY ++IDGLC E G N +A F+ AL
Sbjct: 336 MVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHE-GETN----RALALFNEAL 383
Query: 268 NKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
K ++ + N LI GL + A +L + GL+P V T+NIL+ G
Sbjct: 384 GKG------IKPNVILYN--TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 328 LCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILP 387
LC G + + L K + S G FPD++T+NILI+ + ++ + I +L
Sbjct: 436 LCKMGCVSDADG------LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 388 SCFTPDAVTFTSLIKILEINSFFRQV 413
+ PD T+ SL+ L S F V
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDV 515
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 137/309 (44%), Gaps = 23/309 (7%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V +FNIL L K L K + G FPD +T+NILI+ + ++ + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
L +L + PD T+ SL+ LC S+ + + + GC ++FT+N L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSAL 267
AL L EEM N + PDA+T+ T+IDG CK +++
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNG--------DLDGAYTLF 589
Query: 268 NKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
KM + +V + +I + + +A +LFQ + L P+ TY +++ G
Sbjct: 590 RKMEEAY---KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 328 LCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILP 387
C G ++ FLL + G P L T +INC C RV I R++
Sbjct: 647 FCKTGNVNLGYK----FLL--EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 388 SCFTPDAVT 396
P+AV
Sbjct: 701 KGLVPEAVN 709
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 162/393 (41%), Gaps = 79/393 (20%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
EA+ VF+ M + P V S+N + L + ++D ++ R+ G+ PD Y++ I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 131 LINCFCKMGR-----------------------------------VSHGFVVLGRILRSC 155
+ FCK R + G+ + G++L S
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 156 FTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVAL 215
+ TF L++ LC + + E L K+ G ++FTYN I GLC+ G A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 216 NLFEEMANGNGEFGVVCE----PDAITYSTIIDGLCKEAG---SANFLGFSCMA-----S 263
+ G + E PD ITY+ +I GLCK + + +LG S
Sbjct: 272 RM----------VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 264 FSALNKMAFYFPLVRVQCL---------------CLNFLCLIDGLCKISKLKIARELFQS 308
++ +A Y VQ + LIDGLC + A LF
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
G+ PNV+ YN LI+GL N G + E L ++ GL P++ T+NIL+N
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQ------LANEMSEKGLIPEVQTFNILVNG 435
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
CK+G VS + ++ + PD TF LI
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 148/335 (44%), Gaps = 26/335 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N AL +F+ L + +P V +N L L+ L ++ GL P+ T+NI
Sbjct: 373 NRALALFNEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
L+N CKMG VS ++ ++ + PD TF LI + ++ A + + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+ DV+TYN+L+NGLC+T + ++ M C P+ T++ +++ LC+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYR 545
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
LG ++N A + F LIDG CK L A LF+ +
Sbjct: 546 KLDEALGLLEEMKNKSVNPDA------------VTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 311 RA-GLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
A + + TYNI+I E + LF+ + L PD YTY ++++ F
Sbjct: 594 EAYKVSSSTPTYNIIIHAFT------EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
CK G V+ G+ ++ + F P T +I L
Sbjct: 648 CKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 119/306 (38%), Gaps = 86/306 (28%)
Query: 162 TFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGL---------------- 205
+ +K+ + ++ EA +F ++ + CE VF+YN +++ L
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 206 -------------------CRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGL 246
C+T AL L M++ CE + + Y T++ G
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG------CEMNVVAYCTVVGGF 191
Query: 247 CKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN-FLCLIDGLCKISKLKIAREL 305
+E +F A F L LCL+ F L+ LCK +K +L
Sbjct: 192 YEE-------------NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMD------------------------------ 335
+ + G++PN+ TYN+ I+GLC G++D
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 336 ETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAV 395
+K E L K +N GL PD YTYN LI +CK G V I G + + F PD
Sbjct: 299 NSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 396 TFTSLI 401
T+ SLI
Sbjct: 358 TYRSLI 363
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 64/383 (16%)
Query: 63 GDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLF 122
G + SI +A +F M++ +P P + F L A + Y+TV+ +++ L G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 123 PDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAAL 182
D Y++ ILI+CFC+ R+S VLG++++ + P VTF SL+ C +RI +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 183 -----------------------------------FTKLRVFGCELDVFTYNTLINGLCR 207
++ G DV TYNTL+ GLC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG--SANFLGFSCMASFS 265
+G A + +M + PD +T++ +ID K+ A L + S
Sbjct: 224 SGRWSDAARMLRDMMKRS------INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 266 ALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILI 325
N + + +I+GLC +L A++ F + G PNVVTYN LI
Sbjct: 278 DPNNVTYN--------------SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 326 RGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRI 385
G C +DE LF+R++ G D++TYN LI+ +C++G++ IF +
Sbjct: 324 SGFCKFRMVDEGMK------LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 386 LPSCFTPDAVTFTSLIKILEINS 408
+ TPD +T L+ L +N
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNG 400
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 32/319 (10%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
P V +N L L K + L L + GL D TYN L+ C GR S
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+L +++ PD VTFT+LI + + EA L+ ++ + + TYN++INGLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGSANFLGFSCMA 262
G A F+ MA+ C P+ +TY+T+I G CK + G F SC
Sbjct: 293 MHGRLYDAKKTFDLMASKG------CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC-- 344
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYN 322
N F + LI G C++ KL++A ++F + + P+++T+
Sbjct: 345 --EGFNADIFTYN------------TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 323 ILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIF 382
IL+ GLC +G++ E+ + F + + + + YNI+I+ CK +V + +F
Sbjct: 391 ILLHGLCVNGEI------ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 383 GRILPSCFTPDAVTFTSLI 401
R+ PDA T+T +I
Sbjct: 445 CRLPVEGVKPDARTYTIMI 463
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 125/273 (45%), Gaps = 26/273 (9%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSH 143
R P V +F L K + D L+K + + + P+ TYN +IN C GR+
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 144 GFVVLGRIL-RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLI 202
+ + CF P+ VT+ +LI C + E LF ++ G D+FTYNTLI
Sbjct: 300 AKKTFDLMASKGCF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 203 NGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMA 262
+G C+ G VAL++F M + PD IT+ ++ GLC N S +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRR------VTPDIITHCILLHGLC-----VNGEIESALV 407
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYN 322
F + + Y +V + +I GLCK K++ A ELF LP G+ P+ TY
Sbjct: 408 KFDDMRESEKYIGIVA-------YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 323 ILIRGLCNDGQMDETKHYETVFLLFKRLNSTGL 355
I+I GLC +G E L +R+ G+
Sbjct: 461 IMILGLCKNGPRREADE------LIRRMKEEGI 487
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 8 NGRMRFADRLSRKPTS-SISENEPSYPTTTATLRLTVK----DRASLEQFLKERCKSSGE 62
+GR A R+ R SI+ P T TA + + VK D A ++ KE +SS +
Sbjct: 224 SGRWSDAARMLRDMMKRSIN---PDVVTFTALIDVFVKQGNLDEA--QELYKEMIQSSVD 278
Query: 63 -GDITSITPNEALCV----------FDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLS 111
++T + LC+ FD M + + P V ++N L K + D +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 112 LFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLC 171
LF+R++ G D +TYN LI+ +C++G++ + ++ TPD +T L+ LC
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
I A F +R + + YN +I+GLC+ A LF + GV
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE----GV- 452
Query: 232 CEPDAITYSTIIDGLCKEA 250
+PDA TY+ +I GLCK
Sbjct: 453 -KPDARTYTIMILGLCKNG 470
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 30/341 (8%)
Query: 62 EGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGL 121
EG+I+ +A VFD + R +P V SFN L K + D L ++ +
Sbjct: 253 EGNIS-----DAQKVFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 122 FPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAA 181
PD +TY+ LIN CK ++ + + + P+ V FT+LI I
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 182 LFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYST 241
+ K+ G + D+ YNTL+NG C+ G + A N+ + M PD ITY+T
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG------LRPDKITYTT 420
Query: 242 IIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKI 301
+IDG C+ L + + L RV F L+ G+CK ++
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIE-------LDRV-----GFSALVCGMCKEGRVID 468
Query: 302 ARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYT 361
A + + RAG+ P+ VTY +++ C G +T F L K + S G P + T
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDA------QTGFKLLKEMQSDGHVPSVVT 522
Query: 362 YNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
YN+L+N CK+G++ + ++ +L PD +T+ +L++
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P F L ++ D + ++++ GL PD YN L+N FCK G + +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
+ ++R PD +T+T+LI C + A + ++ G ELD ++ L+ G+C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSAL 267
G I A EM +PD +TY+ ++D CK+ + GF + +
Sbjct: 463 EGRVIDAERALREMLRAG------IKPDDVTYTMMMDAFCKKGDAQT--GFKLLKEMQSD 514
Query: 268 NKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
+ P V + + L++GLCK+ ++K A L ++ G++P+ +TYN L+ G
Sbjct: 515 G----HVPSV------VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Query: 328 LCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILIN 367
+ + +K Y + G+ DL +Y ++N
Sbjct: 565 --HHRHANSSKRY-------IQKPEIGIVADLASYKSIVN 595
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFL 345
F L++ CK + A+++F + + L P VV++N LI G C G +DE F
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG------FR 296
Query: 346 LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
L ++ + PD++TY+ LIN CK ++ +F + P+ V FT+LI
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 289 LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFK 348
L+D + K++ + + AG NV +NIL+ C +G + + + +F
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQK------VFD 264
Query: 349 RLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+ L P + ++N LIN +CK+G + GF + ++ S PD T+++LI L
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 57/388 (14%)
Query: 56 RCKSSGEG--DITSITPNEALC-----VFDYMLNMRPS---RPPVTSFNILFGCLAKTKH 105
RCK S + + ++ NE L +DY++N + P SFN++ L K +
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 106 YDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTS 165
D + +F+ + PD YTY L++ CK R+ ++L + +P V +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 166 LIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 225
LI LC + + L + + GC + TYNTLI+GLC G A++L E M +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 226 GEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN 285
C P+ +TY T+I+GL K+ + + + S++ + ++ Q +
Sbjct: 323 ------CIPNDVTYGTLINGLVKQRRATDAVRL-----LSSMEERGYHLN----QHI--- 364
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHY----- 340
+ LI GL K K + A L++ + G PN+V Y++L+ GLC +G+ +E K
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 341 ------------------------ETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVS 376
E ++K ++ TG + + Y++LI+ C +GRV
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 377 SGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+++ ++L PD V ++S+IK L
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 166/363 (45%), Gaps = 37/363 (10%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA+ + D M + S PV +N+L L K V L + L G P+ TYN
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ C G++ +L R++ S P+ VT+ +LI L + R +A L + + G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
L+ Y+ LI+GL + G A++L+ +MA C+P+ + YS ++DGLC+E
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCRE- 410
Query: 251 GSAN--------FLGFSCMA---SFSALNKMAF-----------YFPLVRVQCLCLNFLC 288
G N + C+ ++S+L K F + + + C N C
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC-SRNKFC 469
Query: 289 ---LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFL 345
LIDGLC + ++K A ++ + G+ P+ V Y+ +I+GLC G MD L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 346 LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKILE 405
+ S PD+ TYNIL++ C +S + +L PD +T + + L
Sbjct: 530 CQEEPKSQ---PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 406 INS 408
S
Sbjct: 587 EKS 589
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 30/302 (9%)
Query: 93 FNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRIL 152
+++L L K + +SL++++ G P+ Y++L++ C+ G+ + +L R++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 153 RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTI 212
S P+A T++SL+K EA ++ ++ GC + F Y+ LI+GLC G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 213 VALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAF 272
A+ ++ +M + +PD + YS+II GLC G M + L
Sbjct: 485 EAMMVWSKM------LTIGIKPDTVAYSSIIKGLC---------GIGSMDAALKLYHEML 529
Query: 273 YFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDG 332
+ Q + + L+DGLC + A +L S+ G P+V+T N + L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 333 QM-DETKHY--ETVFLLFKRLNSTG------------LFPDLYTYNILINCFCKIGRVSS 377
D+ + + E V L KR +G L P T+ +++ CK ++++
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 378 GF 379
Sbjct: 650 AI 651
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 178 EAAALFTKL-RVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDA 236
+A LF ++ F C+ V ++N+++N + G L ++ + N N + P+
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187
Query: 237 ITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCL--CLNFLCLIDGLC 294
++++ +I LCK L F A + + + +CL + L+DGLC
Sbjct: 188 LSFNLVIKALCK-------LRFVDRA-------IEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 295 KISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDE-TKHYETVFLLFKRLNST 353
K ++ A L + G P+ V YN+LI GLC G + TK + +FL
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL-------K 286
Query: 354 GLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
G P+ TYN LI+ C G++ + R++ S P+ VT+ +LI
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLI 334
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 148/333 (44%), Gaps = 29/333 (8%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
EA+ F M R P S N L AK D V FK + G P +TYNI
Sbjct: 209 EEAIQCFSKMKRFRVF-PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I+C CK G V + + PD VT+ S+I R+ + F +++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
CE DV TYN LIN C+ G + L + EM GNG +P+ ++YST++D CKE
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEG 381
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLC--LNFLCLIDGLCKISKLKIARELFQS 308
+ FY + RV + + LID CKI L A L
Sbjct: 382 --------------MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
+ + G+ NVVTY LI GLC+ +M E + LF ++++ G+ P+L +YN LI+
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEE------LFGKMDTAGVIPNLASYNALIHG 481
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
F K + + + PD + + + I
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 66/330 (20%)
Query: 76 VFDYMLNMRPS-RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINC 134
VFD + + R P F+ LF L + + F ++ +FP + N L++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 135 FCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELD 194
F K+G+ T D F KD+ G
Sbjct: 237 FAKLGK----------------TDDVKRF---FKDMIGA----------------GARPT 261
Query: 195 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSAN 254
VFTYN +I+ +C+ G A LFEEM G+V PD +TY+++IDG K
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFR----GLV--PDTVTYNSMIDGFGK------ 309
Query: 255 FLGFSCMASFSALNKMAFYFPLVRVQCL---CLNFLCLIDGLCKISKLKIARELFQSLPR 311
L+ +F ++ C + + LI+ CK KL I E ++ +
Sbjct: 310 ---------VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
GL PNVV+Y+ L+ C +G M + + + + GL P+ YTY LI+ CK
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKF------YVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
IG +S F + +L + VT+T+LI
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 23/313 (7%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V ++ L L + LF +++ G+ P+ +YN LI+ F K + +L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
+ PD + + + I LC+ +I A + +++ G + + Y TL++ ++G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 210 HTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNK 269
+ L+L +EM + E VV T+ +IDGLCK + + + N+
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVV------TFCVLIDGLCKNKLVSKAVDY--------FNR 602
Query: 270 MAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
++ F L Q F +IDGLCK ++++ A LF+ + + GL+P+ Y L+ G
Sbjct: 603 ISNDFGL---QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 330 NDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSC 389
G + E L ++ G+ DL Y L+ ++ ++
Sbjct: 660 KQGNVLEA------LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 390 FTPDAVTFTSLIK 402
PD V S++K
Sbjct: 714 IHPDEVLCISVLK 726
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 36/292 (12%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P + S+N L K K+ D L L L G+ PD Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
+ + +++ +T+L+ E L +++ E+ V T+ LI+GLC+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK----EAGS----------- 252
A++ F ++N +FG+ + +A ++ +IDGLCK EA +
Sbjct: 590 NKLVSKAVDYFNRISN---DFGL--QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 253 ------------ANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLK 300
NF + + + + +KMA + ++ L + L+ GL ++L+
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMA----EIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 301 IARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNS 352
AR + + G+ P+ V +++ G +DE ++ + + L S
Sbjct: 701 KARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 153/345 (44%), Gaps = 37/345 (10%)
Query: 68 ITPNEALCVFDYMLNMRP-SRPP-VTSFNILFGCLAKTKH-YDTVLSLFKRLNLTGLFPD 124
+ N+ F + NMR PP V S N+L L + D L +F + G PD
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFT 184
YTY LI+ C+ GR+ + ++ P VT+TSLI LC + EA
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 185 KLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCEPDAITYSTII 243
+++ G E +VFTY++L++GLC+ G ++ A+ LFE MA G C P+ +TY+T+I
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG-------CRPNMVTYTTLI 304
Query: 244 DGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAR 303
GLCKE + + L A + V I G C ISK + A
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV------------ISGFCAISKFREAA 352
Query: 304 ELFQSLPRAGLMPNVVTYNI-------LIRGLCNDGQMDETKHYETVFLLFKRLNSTGLF 356
+ G+ PN +T+NI ++RGLC + + F L+ + S G+
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-------YPSRAFTLYLSMRSRGIS 405
Query: 357 PDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
++ T L+ C CK G + I+ P T+ LI
Sbjct: 406 VEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 31/297 (10%)
Query: 110 LSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKD 169
L +F ++ P + Y ++ + +++ F + P + LIK
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 170 LCAESRIMEAA-ALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 228
LC ++A +F ++ GC+ D +TY TLI+GLCR G A LF EM +
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD--- 222
Query: 229 GVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN--- 285
C P +TY+++I+GLC GS N +++ Y ++ + + N
Sbjct: 223 ---CAPTVVTYTSLINGLC---GSKN------------VDEAMRYLEEMKSKGIEPNVFT 264
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFL 345
+ L+DGLCK + A ELF+ + G PN+VTY LI GLC + ++ E
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE------ 318
Query: 346 LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
L R+N GL PD Y +I+ FC I + ++ TP+ +T+ +K
Sbjct: 319 LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 158 PDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVA-LN 216
P + +++ L E+++ A + +R G V + N LI LCR T+ A L
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 217 LFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYF-P 275
+F EM C+PD+ TY T+I GLC+ F +++ F
Sbjct: 179 IFLEMPKRG------CDPDSYTYGTLISGLCR---------------FGRIDEAKKLFTE 217
Query: 276 LVRVQCL--CLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQ 333
+V C + + LI+GLC + A + + G+ PNV TY+ L+ GLC DG+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 334 MDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPD 393
+ LF+ + + G P++ TY LI CK ++ + R+ PD
Sbjct: 278 SLQAME------LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 394 AVTFTSLIKILEINSFFRQVA 414
A + +I S FR+ A
Sbjct: 332 AGLYGKVISGFCAISKFREAA 352
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 139/309 (44%), Gaps = 25/309 (8%)
Query: 93 FNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRIL 152
+N L LA+ D + ++ + + P+ YTYN ++N +CK+G V + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 153 RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTI 212
+ PD T+TSLI C + A +F ++ + GC + Y LI+GLC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 213 VALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAF 272
A++LF +M + C P TY+ +I LC + L + +
Sbjct: 306 EAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK---- 355
Query: 273 YFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDG 332
P + + LID LC K + AREL + GLMPNV+TYN LI G C G
Sbjct: 356 --PNIHT------YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 333 QMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTP 392
+ E + + + S L P+ TYN LI +CK V + ++L P
Sbjct: 408 MI------EDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460
Query: 393 DAVTFTSLI 401
D VT+ SLI
Sbjct: 461 DVVTYNSLI 469
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 48/345 (13%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+P + ++ +L L ++ L ++ GL P+ TYN LIN +CK G +
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
V+ + +P+ T+ LIK C +S + +A + K+ DV TYN+LI+G C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
R+G+ A L M + G+V PD TY+++ID LCK F +
Sbjct: 474 RSGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRVEEACDL-----FDS 522
Query: 267 LNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIR 326
L + +V + LIDG CK K+ A + + + +PN +T+N LI
Sbjct: 523 LEQKGVNPNVVM-------YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 327 GLCNDGQMDETK-----------------------------HYETVFLLFKRLNSTGLFP 357
GLC DG++ E ++ + F+++ S+G P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 358 DLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
D +TY I +C+ GR+ + ++ + +PD T++SLIK
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 26/331 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+ A VF+ M ++ R ++ L L + D + LF ++ FP TY +
Sbjct: 270 DSAFKVFNEM-PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI C R S ++ + + P+ T+T LI LC++ + +A L ++ G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+V TYN LING C+ G A+++ E M + P+ TY+ +I G CK
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNELIKGYCKS- 441
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
+ + LNKM L V + + LIDG C+ A L +
Sbjct: 442 --------NVHKAMGVLNKMLERKVLPDV----VTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
GL+P+ TY +I LC ++K E LF L G+ P++ Y LI+ +C
Sbjct: 490 DRGLVPDQWTYTSMIDSLC------KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
K G+V ++ ++L P+++TF +LI
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 39/340 (11%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
++A+ V + ML R P V ++N L ++ ++D+ L +N GL PD++TY
Sbjct: 444 HKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I+ CK RV + + + P+ V +T+LI C ++ EA + K+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C + T+N LI+GLC G A L E+M + +P T + +I L K+
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVK------IGLQPTVSTDTILIHRLLKDG 616
Query: 251 G-SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
+ F M S Y ++ C+ +L A ++ +
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQT-------------YCREGRLLDAEDMMAKM 663
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
G+ P++ TY+ LI+G + GQ + F + KR+ TG P +T+ LI
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTN------FAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 370 CKIGRVSSGFVIFGRILPS----CFTPDAVTFTSLIKILE 405
++ +G+ S C + + F +++++LE
Sbjct: 718 LEMK--------YGKQKGSEPELCAMSNMMEFDTVVELLE 749
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 150/374 (40%), Gaps = 55/374 (14%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA + + ML+ + P +FN L L L +++ GL P T I
Sbjct: 549 DEAHLMLEKMLS-KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ K G H + ++L S PDA T+T+ I+ C E R+++A + K+R G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLC--- 247
D+FTY++LI G G T A ++ + M + CEP T+ ++I L
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQHTFLSLIKHLLEMK 721
Query: 248 --KEAGS-------ANFLGFSC-------MASFSALNKMAFYFPLVRVQCLCLN------ 285
K+ GS +N + F M S Y L+ C N
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 286 -----------------FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGL 328
F L+ CK+ K A ++ + G +P + + +LI GL
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 329 CNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPS 388
G+ + +F+ L G + D + I+I+ K G V + + +F + +
Sbjct: 842 YKKGEKERGTS------VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 389 CFTPDAVTFTSLIK 402
+ T++ LI+
Sbjct: 896 GCKFSSQTYSLLIE 909
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 112/279 (40%), Gaps = 34/279 (12%)
Query: 126 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTK 185
Y+Y L+ G V F + +++SC D+V + DLC + E L K
Sbjct: 124 YSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKYK 180
Query: 186 LRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDG 245
L + GC YNTL+N L R G ++ EM VC P+ TY+ +++G
Sbjct: 181 L-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK-----VC-PNIYTYNKMVNG 227
Query: 246 LCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIAREL 305
CK + + L+ F + LI G C+ L A ++
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFF------------TYTSLIMGYCQRKDLDSAFKV 275
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNIL 365
F +P G N V Y LI GLC ++DE LF ++ FP + TY +L
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD------LFVKMKDDECFPTVRTYTVL 329
Query: 366 INCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
I C R S + + + P+ T+T LI L
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 116/317 (36%), Gaps = 81/317 (25%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+P V++ IL L K +D S F+++ +G PD +TY I +C+ GR+
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 147 VLGRILRSCFTPDAVTFTSLIK-------------------------------------- 168
++ ++ + +PD T++SLIK
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 169 ------------DLCAESRIME---AAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIV 213
+LCA S +ME L K+ + +Y LI G+C G+ V
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 214 ALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK-----EAGSANF----LGF-----S 259
A +F+ M G P + ++ ++ CK EA +G S
Sbjct: 779 AEKVFDHMQRNEG-----ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 260 CMASFSALNKMAFYFPLVRV-----QCLC----LNFLCLIDGLCKISKLKIARELFQSLP 310
C L K V QC L + +IDG+ K ++ ELF +
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 311 RAGLMPNVVTYNILIRG 327
+ G + TY++LI G
Sbjct: 894 KNGCKFSSQTYSLLIEG 910
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%)
Query: 76 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCF 135
VFD+M P FN L C K K ++ + + G P + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 136 CKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDV 195
K G G V +L+ + D + + +I + + + LF + GC+
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 196 FTYNTLING 204
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 27/318 (8%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRL-NLTGL--FPDRYTYNILINCFCKMGRVSHG 144
P + FN + +AK + YD V++L+KR+ N G+ PD YT NIL+NCFC+ + S
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 145 FVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLING 204
LG++++ PD VT +SL+ C + I +A + ++ G + DV LI+
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 205 LCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASF 264
LC+ + AL + + M + P+ +TYS++I GLCK A+ +
Sbjct: 203 LCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLAD--------AE 248
Query: 265 SALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
L++M ++ + F LID K KL +++ + + + PNV TY+ L
Sbjct: 249 RRLHEM----DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 304
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
I GLC ++DE + + S G P++ TY+ L N F K RV G +
Sbjct: 305 IYGLCMHNRVDEA------IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 358
Query: 385 ILPSCFTPDAVTFTSLIK 402
+ + V+ +LIK
Sbjct: 359 MPQRGVAANTVSCNTLIK 376
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 18/276 (6%)
Query: 79 YMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKM 138
+ ++ + P V +F+ L AK V S++K + + P+ +TY+ LI C
Sbjct: 252 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 311
Query: 139 GRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTY 198
RV +L ++ TP+ VT+++L SR+ + L + G + +
Sbjct: 312 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 371
Query: 199 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGF 258
NTLI G + G +AL +F M + G++ P+ +Y+ ++ GL AN
Sbjct: 372 NTLIKGYFQAGKIDLALGVFGYMTSN----GLI--PNIRSYNIVLAGLF-----ANGEVE 420
Query: 259 SCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNV 318
++ F + K R + + +I G+CK +K A +LF L + P+
Sbjct: 421 KALSRFEHMQK-------TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 473
Query: 319 VTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTG 354
Y I+I L G E + R N +
Sbjct: 474 KAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESA 509
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 73 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
AL VF YM + P + S+NI+ L + LS F+ + T D TY I+I
Sbjct: 387 ALGVFGYMTS-NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 445
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAAL 182
+ CK V + + ++ PD +T +I +L EA AL
Sbjct: 446 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Query: 270 MAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAG---LMPNVVTYNILIR 326
MA+ +PL + + F ++ + K+ + L++ + A + P++ T NIL+
Sbjct: 76 MAYSYPLPSI----VEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVN 131
Query: 327 GLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRIL 386
C Q Y ++ G+ PD+ T + L+N FC + + G++
Sbjct: 132 CFCRCFQPSSALSY------LGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185
Query: 387 PSCFTPDAVTFTSLIKIL 404
D V T LI L
Sbjct: 186 KMGIKRDVVVDTILIDTL 203
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 148/352 (42%), Gaps = 63/352 (17%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P + ++N L + + L + G P YTYN +IN CK G+ V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRV---------FGCELDVFT- 197
+LRS +PD+ T+ SL+ + C + ++E +F+ +R F + +FT
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 198 -------------------------YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 232
Y LI G CR G VA+NL EM C
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG------C 441
Query: 233 EPDAITYSTIIDGLCKEA--GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLI 290
D +TY+TI+ GLCK G A+ L F+ + + A FP LI
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKL-------FNEMTERAL-FPD------SYTLTILI 487
Query: 291 DGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRL 350
DG CK+ L+ A ELFQ + + +VVTYN L+ G G +D K ++ +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE------IWADM 541
Query: 351 NSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
S + P +Y+IL+N C G ++ F ++ ++ P + S+IK
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 35/331 (10%)
Query: 94 NILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILR 153
N L G L + + +++ ++ +G+ + YT NI++N CK G++ L ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 154 SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIV 213
PD VT+ +LI ++ + EA L + G V+TYNT+INGLC+ G
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 214 ALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSA----------------NFLG 257
A +F EM PD+ TY +++ CK+ + +
Sbjct: 324 AKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 258 FSCMASF----SALNKMAFYFPLVRVQCLCLN---FLCLIDGLCKISKLKIARELFQSLP 310
FS M S L+K YF V+ L + + LI G C+ + +A L +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
+ G +VVTYN ++ GLC + E LF + LFPD YT ILI+ C
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADK------LFNEMTERALFPDSYTLTILIDGHC 491
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
K+G + + +F ++ D VT+ +L+
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 166/394 (42%), Gaps = 53/394 (13%)
Query: 45 DRASLEQFLKERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTK 104
D + L E CK +GD+ E VF M + R P + F+ + ++
Sbjct: 339 DSTTYRSLLMEACK---KGDVV-----ETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSG 389
Query: 105 HYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFT 164
+ D L F + GL PD Y ILI +C+ G +S + +L+ D VT+
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 165 SLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANG 224
+++ LC + EA LF ++ D +T LI+G C+ G+ A+ LF++M
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 225 NGEFGVVCEPDAITYSTIIDGLCK--EAGSANFLGFSCMASFSALNKMAFYFPLVRVQC- 281
D +TY+T++DG K + +A + ++ M S L Y LV C
Sbjct: 510 R------IRLDVVTYNTLLDGFGKVGDIDTAKEI-WADMVSKEILPTPISYSILVNALCS 562
Query: 282 ---LCLNF----------------LC--LIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
L F +C +I G C+ + + G +P+ ++
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 321 YNILIRGLCNDGQMDETKHYETVFLLFKRLNST--GLFPDLYTYNILINCFCKIGRVSSG 378
YN LI G + M + F L K++ GL PD++TYN +++ FC+ ++
Sbjct: 623 YNTLIYGFVREENMSKA------FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 379 FVIFGRILPSCFTPDAVTFTSLIKILEINSFFRQ 412
V+ +++ PD T+T + IN F Q
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCM-----INGFVSQ 705
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EA V+D M++ + +P V N + ++ + S +++ G PD +YN L
Sbjct: 568 EAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 132 INCFCKMGRVSHGFVVLGRIL--RSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
I F + +S F ++ ++ + PD T+ S++ C ++++ EA + K+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEM 221
G D TY +ING + A + +EM
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V ++N + + + +++ G+ PDR TY +IN F ++ F +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 148 LGRILRSCFTPD 159
+L+ F+PD
Sbjct: 715 HDEMLQRGFSPD 726
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 161/322 (50%), Gaps = 28/322 (8%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKM---GR 140
R +P V +FN++ L KT + + + + + G P+ +YN LI+ +CK+ G+
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
+ VL ++ + +P+ TF LI + + + +F ++ + +V +YN+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 201 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSC 260
LINGLC G A+++ ++M + GV +P+ ITY+ +I+G CK N +
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCK-----NDMLKEA 385
Query: 261 MASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
+ F ++ K P R+ + LID CK+ K+ L + + R G++P+V T
Sbjct: 386 LDMFGSV-KGQGAVPTTRM------YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 321 YNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFV 380
YN LI GLC +G ++ K LF +L S GL PDL T++IL+ +C+ G +
Sbjct: 439 YNCLIAGLCRNGNIEAAKK------LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 381 IFGRILPSCFTPDAVTFTSLIK 402
+ + P +T+ ++K
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMK 513
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 34/343 (9%)
Query: 57 CKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRL 116
CK G G + +A V M+ S P +T+FNIL K + + +FK +
Sbjct: 269 CKLGGNGKMY-----KADAVLKEMVENDVS-PNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 117 NLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRI 176
+ P+ +YN LIN C G++S + +++ + P+ +T+ +LI C +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 177 MEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDA 236
EA +F ++ G YN LI+ C+ G L EEM G+V PD
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME----REGIV--PDV 436
Query: 237 ITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCL--CLNFLCLIDGLC 294
TY+ +I GLC+ + A K+ F + + L + F L++G C
Sbjct: 437 GTYNCLIAGLCRN------------GNIEAAKKL---FDQLTSKGLPDLVTFHILMEGYC 481
Query: 295 KISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTG 354
+ + + A L + + + GL P +TYNI+++G C +G + + T +RL
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM-- 539
Query: 355 LFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTF 397
++ +YN+L+ + + G++ ++ +L P+ +T+
Sbjct: 540 ---NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 28/307 (9%)
Query: 99 CLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 158
L K V ++K + + P+ +T+N++IN CK G+++ V+ + +P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 159 DAVTFTSLIKDLC---AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVAL 215
+ V++ +LI C ++ +A A+ ++ ++ T+N LI+G + + ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 216 NLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFP 275
+F+EM + + +P+ I+Y+++I+GLC G + S +KM
Sbjct: 317 KVFKEMLDQD------VKPNVISYNSLINGLCN--------GGKISEAISMRDKMVS--- 359
Query: 276 LVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMD 335
VQ + + LI+G CK LK A ++F S+ G +P YN+LI C G++D
Sbjct: 360 -AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 336 ETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAV 395
+ F L + + G+ PD+ TYN LI C+ G + + +F + L S PD V
Sbjct: 419 DG------FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ-LTSKGLPDLV 471
Query: 396 TFTSLIK 402
TF L++
Sbjct: 472 TFHILME 478
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 34/297 (11%)
Query: 88 PPVTSFNIL------FGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRV 141
P V S+N L G K D VL K + + P+ T+NILI+ F K +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVL---KEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 142 SHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTL 201
V +L P+ +++ SLI LC +I EA ++ K+ G + ++ TYN L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 202 INGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCM 261
ING C+ AL++F + G G P Y+ +ID CK + GF+
Sbjct: 373 INGFCKNDMLKEALDMFGSVK-GQGAV-----PTTRMYNMLIDAYCKLGKIDD--GFALK 424
Query: 262 ASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTY 321
+ P V + CLI GLC+ ++ A++LF L GL P++VT+
Sbjct: 425 EEM----EREGIVPDVGT------YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473
Query: 322 NILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSG 378
+IL+ G C G+ +L K ++ GL P TYNI++ +CK G + +
Sbjct: 474 HILMEGYCRKGE------SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 27/311 (8%)
Query: 94 NILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILR 153
++L A ++ FKR G + L+ K R + V ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 154 SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR---TGH 210
P+ TF +I LC ++ +A + ++V+GC +V +YNTLI+G C+ G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 211 TIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKM 270
A + +EM + P+ T++ +IDG K+ N G M F +
Sbjct: 277 MYKADAVLKEMVEND------VSPNLTTFNILIDGFWKD---DNLPG--SMKVFKEMLDQ 325
Query: 271 AFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCN 330
V+ +++ LI+GLC K+ A + + AG+ PN++TYN LI G C
Sbjct: 326 D-------VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 331 DGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCF 390
+ + E +F + G P YN+LI+ +CK+G++ GF + +
Sbjct: 379 NDMLKEA------LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 391 TPDAVTFTSLI 401
PD T+ LI
Sbjct: 433 VPDVGTYNCLI 443
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 32/309 (10%)
Query: 73 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
++ VF ML+ + +P V S+N L L +S+ ++ G+ P+ TYN LI
Sbjct: 315 SMKVFKEMLD-QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCE 192
N FCK + + G + P + LI C +I + AL ++ G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 193 LDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGS 252
DV TYN LI GLCR G+ A LF+++ + G+ PD +T+ +++G C++ S
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK----GL---PDLVTFHILMEGYCRKGES 486
Query: 253 ANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRA 312
++KM ++ L + ++ G CK LK A + + +
Sbjct: 487 R-----KAAMLLKEMSKMG-------LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 313 -GLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
L NV +YN+L++G G++++ +L + GL P+ TY I+ K
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDAN------MLLNEMLEKGLVPNRITYEIV-----K 583
Query: 372 IGRVSSGFV 380
V GFV
Sbjct: 584 EEMVDQGFV 592
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 38/329 (11%)
Query: 92 SFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRI 151
++ +L L K D +F+ + G+ PD ++Y +LIN F K+G + + +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 152 LRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHT 211
+ TP+ + + L+ C I +A L ++ V G + TY T+I+G C++G
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 212 IVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGF---------SCMA 262
A LF+EM G+V PD+ Y+T++DG C+ + S A
Sbjct: 714 AEAFRLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFL-----------------CLIDGLCKISKLKIAREL 305
F+AL F F ++ LN L +ID LCK L+ A+EL
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 306 FQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNIL 365
F + A LMP V+TY L+ G G+ E +F +F + G+ PD Y+++
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAE------MFPVFDEAIAAGIEPDHIMYSVI 881
Query: 366 INCFCKIGRVSSGFVIFGRILPSCFTPDA 394
IN F K G + V+ ++ D
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDG 910
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 137/328 (41%), Gaps = 43/328 (13%)
Query: 111 SLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDL 170
S ++ + G+ D TY +L+N K +V + + PD ++ LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 171 CAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 230
+ +A+++F ++ G +V YN L+ G CR+G A L +EM+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG----- 692
Query: 231 VCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLN----- 285
P+A+TY TIIDG CK A L +F + + C LN
Sbjct: 693 -LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 286 -----------------FLCLIDGLCKISKLKIARELFQSLPRAGL----MPNVVTYNIL 324
F LI+ + K K ++ E+ L PN VTYNI+
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
I LC +G ++ K LF ++ + L P + TY L+N + K+GR + F +F
Sbjct: 812 IDYLCKEGNLEAAKE------LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 385 ILPSCFTPDAVTFTSLIKILEINSFFRQ 412
+ + PD + ++ + IN+F ++
Sbjct: 866 AIAAGIEPDHIMYSVI-----INAFLKE 888
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 30/318 (9%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
RP V + L + + + + K + G+ PD + YN LI K R+
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
L ++ + P+A T+ + I S A ++R G + LIN C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSA 266
+ G I A + + M + G G DA TY+ +++GL K
Sbjct: 569 KKGKVIEACSAYRSMVD-QGILG-----DAKTYTVLMNGLFKN---------------DK 607
Query: 267 LNKMAFYFPLVRVQCLC---LNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNI 323
++ F +R + + ++ LI+G K+ ++ A +F + GL PNV+ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 324 LIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFG 383
L+ G C G++++ K L ++ GL P+ TY +I+ +CK G ++ F +F
Sbjct: 668 LLGGFCRSGEIEKAKE------LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 384 RILPSCFTPDAVTFTSLI 401
+ PD+ +T+L+
Sbjct: 722 EMKLKGLVPDSFVYTTLV 739
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 158/366 (43%), Gaps = 66/366 (18%)
Query: 92 SFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRI 151
++++L L K ++ D L + G+ Y Y+ I K G + + +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 152 LRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHT 211
+ S P A + SLI+ C E + + L +++ + +TY T++ G+C +G
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 212 IVALNLFEEM-ANG-----------------NGEFG----VVCE-------PDAITYSTI 242
A N+ +EM A+G N FG V+ E PD Y+++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 243 IDGLCK-----EAGS------------------ANFLGFSCMASFSALNKMAFYFPLVRV 279
I GL K EA S A G+ + F++ +K Y +R
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK---YVKEMR- 549
Query: 280 QCLCL--NFLC--LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMD 335
+C L LC LI+ CK K+ A ++S+ G++ + TY +L+ GL + ++D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 336 ETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAV 395
+ + +F+ + G+ PD+++Y +LIN F K+G + IF ++ TP+ +
Sbjct: 610 DAEE------IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 396 TFTSLI 401
+ L+
Sbjct: 664 IYNMLL 669
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 143/390 (36%), Gaps = 69/390 (17%)
Query: 62 EGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGL 121
+G I EA+ VF + + P ++ +L L + D ++K + +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 122 FPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFT---------------------PDA 160
D TY++LI C+ G V G VL + + T P
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 161 VTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEE 220
T+ LI LC R+ +A +L ++ G LD TY+ LI+GL + + A L E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 221 MANG-----------------------------NGEFGVVCEPDAITYSTIIDGLCKEAG 251
M + +G P A Y+++I+G C+E
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPR 311
G+ + N + + + ++ G+C L A + + +
Sbjct: 398 VRQ--GYELLVEMKKRNIVISPY----------TYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
+G PNVV Y LI+ + + + + K + G+ PD++ YN LI K
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMR------VLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
R+ ++ + P+A T+ + I
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 108/290 (37%), Gaps = 57/290 (19%)
Query: 81 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTY------------ 128
++++ P ++ + K+ LF + L GL PD + Y
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 129 ----------------------NILINCFCKMGRVSHGFVVLGRILRSCF----TPDAVT 162
N LIN K G+ VL R++ F P+ VT
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 163 FTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEE-M 221
+ +I LC E + A LF +++ V TY +L+NG + G +F+E +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 222 ANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQC 281
A G EPD I YS II+ KE + L L F V C
Sbjct: 868 AAG-------IEPDHIMYSVIINAFLKEGMTTKAL---------VLVDQMFAKNAVDDGC 911
Query: 282 LCLNFLC--LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
C L+ G K+ ++++A ++ +++ R +P+ T LI C
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 171/395 (43%), Gaps = 68/395 (17%)
Query: 47 ASLEQFLKERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHY 106
AS +ER ++ ++ I ++A +F ML RP P + F + +AK +
Sbjct: 41 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKF 95
Query: 107 DTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSL 166
D V+ L+ ++ G+ D Y++ ILI+CFC+ R+S +LG++++ F P VT SL
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 167 IKDLCAESRIMEAAALFTKLRVFG-----------------------------------C 191
+ C +R EA +L + FG
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
D TYNTLI+GL +G A L +M +P+ I ++ +ID KE
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK------IDPNVIFFTALIDTFVKEG- 268
Query: 252 SANFLGFSCMASFSALNKMAFYFPLVRVQCL--CLNFLCLIDGLCKISKLKIARELFQSL 309
+ L Y ++R + + LI+G C L A+ +F +
Sbjct: 269 -------------NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
G P+VVTYN LI G C ++K E LF + GL D +TYN LI+ +
Sbjct: 316 VSKGCFPDVVTYNTLITGFC------KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
C+ G+++ +F R++ +PD VT+ L+ L
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 59/350 (16%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCK--------- 137
RP + + L + + +SL ++ G P+ YN +IN CK
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 138 --------------------------MGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLC 171
GR + +L +++ P+ + FT+LI
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 172 AESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
E ++EA L+ ++ +VFTYN+LING C G A +F+ M +
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------ 319
Query: 232 CEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLID 291
C PD +TY+T+I G CK + + C ++ L AF + LI
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN------------TLIH 367
Query: 292 GLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLN 351
G C+ KL +A+++F + G+ P++VTYNIL+ LCN+G++ E ++ + L
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI------EKALVMVEDLQ 421
Query: 352 STGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ + D+ TYNI+I C+ ++ + +F + PDA+ + ++I
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Query: 84 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCK---MGR 140
R P V F L K + +L+K + + P+ +TYN LIN FC +G
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
+ F ++ + + CF PD VT+ +LI C R+ + LF ++ G D FTYNT
Sbjct: 308 AKYMFDLM--VSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 201 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSC 260
LI+G C+ G VA +F M + GV PD +TY+ ++D LC L
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMV----DCGV--SPDIVTYNILLDCLCNNGKIEKAL---- 414
Query: 261 MASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVT 320
L K ++ + +I GLC+ KLK A LF+SL R G+ P+ +
Sbjct: 415 -VMVEDLQKSEMDVDII-------TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 321 YNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYN 363
Y +I GLC G E L +R+ G P Y+
Sbjct: 467 YITMISGLCRKGLQREADK------LCRRMKEDGFMPSERIYD 503
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 79 YMLNMRPSR---PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCF 135
YM ++ S+ P V ++N L K+K + + LF + GL D +TYN LI+ +
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 136 CKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDV 195
C+ G+++ V R++ +PD VT+ L+ LC +I +A + L+ ++D+
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 196 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
TYN +I GLCRT A LF + GV +PDAI Y T+I GLC++
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKG 478
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N A VF+ M++ S P + ++NIL CL + L + + L + + D TYNI
Sbjct: 376 NVAQKVFNRMVDCGVS-PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I C+ ++ + + + R PDA+ + ++I LC + EA L +++ G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYN 322
SFS + Y +R + C+ F C E+ QS P +P++V +
Sbjct: 37 SFSGASHHHHYRERLRNELHCIKFDDAFSLFC---------EMLQSRP----IPSIVDFT 83
Query: 323 ILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIF 382
R L +M++ ++ V L+ ++ + G+ DLY++ ILI+CFC+ R+S +
Sbjct: 84 ---RVLTVIAKMNK---FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 383 GRILPSCFTPDAVTFTSLI 401
G+++ F P VT SL+
Sbjct: 138 GKMMKLGFRPSIVTLGSLL 156
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
+ ++NI+ L +T LF+ L G+ PD Y +I+ C+ G +
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 150 RILRSCFTPDAVTFTSLIKD 169
R+ F P + ++D
Sbjct: 489 RMKEDGFMPSERIYDETLRD 508
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 16/307 (5%)
Query: 99 CLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 158
CL Y+ S+ + + G PD TY+ ++N C ++ F++ + R
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 159 DAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLF 218
D T+T ++ C I +A F ++R GC +V TY LI+ + A LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 219 EEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLG-FSCMASFSALNKMAFYFPLV 277
E M + C P+ +TYS +IDG CK F M + + YF
Sbjct: 577 ETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630
Query: 278 RVQCLCLNFL---CLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQM 334
N + L+DG CK +++ AR+L ++ G PN + Y+ LI GLC G++
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 335 DETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDA 394
DE + +T ++ G LYTY+ LI+ + K+ R + ++L + P+
Sbjct: 691 DEAQEVKT------EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 395 VTFTSLI 401
V +T +I
Sbjct: 745 VIYTEMI 751
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 138/358 (38%), Gaps = 72/358 (20%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
RP +++N L K D+ + + ++L L D +T CK+G+
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTY-------- 198
+ + F PD V +T LI LC S EA ++R C +V TY
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 199 ---------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 231
N+L++ C +G A L ++M
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH----- 403
Query: 232 CEPDAITYSTIIDGLCKEAGSAN--FLGFS------CMASFSALNKMAFYFPLVRVQCLC 283
P + Y+ +I +C + S N L + +A+ LNK
Sbjct: 404 -MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK-------------- 448
Query: 284 LNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETV 343
+N LC K + A + + + G +P+ TY+ ++ LCN +M E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM------ELA 502
Query: 344 FLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
FLLF+ + GL D+YTY I+++ FCK G + F + TP+ VT+T+LI
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 158/383 (41%), Gaps = 79/383 (20%)
Query: 76 VFDYMLNMRPSR--PPVTSFNILF-GCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILI 132
D++ MR + P V +++ L GCL K K + + + G +P +N L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 133 NCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAE----------------SRI 176
+ +C G S+ + +L ++++ P V + LI +C + S +
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 177 MEAAALFTKLRVF-------------------------GCELDVFTYNTLINGLCRTGHT 211
+ A + K+ V G D TY+ ++N LC
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 212 IVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMA 271
+A LFEEM G G+V D TY+ ++D CK AG + +
Sbjct: 500 ELAFLLFEEMKRG----GLV--ADVYTYTIMVDSFCK-AG--------------LIEQAR 538
Query: 272 FYFPLVR-VQCL--CLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGL 328
+F +R V C + + LI K K+ A ELF+++ G +PN+VTY+ LI G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 329 CNDGQMDE----------TKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSG 378
C GQ+++ +K V + FK+ + P++ TY L++ FCK RV
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 379 FVIFGRILPSCFTPDAVTFTSLI 401
+ + P+ + + +LI
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALI 681
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 139/358 (38%), Gaps = 59/358 (16%)
Query: 86 SRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGF 145
RP V ++ L K+ + L +++ G P++ Y+ LI+ CK+G++
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 146 VVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGL 205
V + F T++SLI R A+ + +K+ C +V Y +I+GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 206 CRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFS 265
C+ G T A L + M C+P+ +TY+ +IDG F
Sbjct: 755 CKVGKTDEAYKLMQMMEEKG------CQPNVVTYTAMIDG------------------FG 790
Query: 266 ALNKMAFYFPLVR------VQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVV 319
+ K+ L+ V + + LID CK L +A L + + + +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 320 TYNILIR----------GLCNDGQMDETKHYETVFLLF-------KRLN----------- 351
Y +I GL ++ D+T + +V+ L +RL
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 352 -STGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKILEINS 408
S L TYN LI C +V + F +F + P+ +F SLIK L NS
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 96 LFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSC 155
+F + +K V FK+ + P+ TY L++ FCK RV +L +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 156 FTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVAL 215
P+ + + +LI LC ++ EA + T++ G ++TY++LI+ + +A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 216 NLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFP 275
+ +M + C P+ + Y+ +IDGLCK + M
Sbjct: 730 KVLSKMLENS------CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--------- 774
Query: 276 LVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMD 335
Q + + +IDG I K++ EL + + G+ PN VTY +LI C +G +D
Sbjct: 775 ---CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 336 ----------------ETKHYETVFLLFKR--LNSTGLF---------PDLYTYNILINC 368
T Y V F + + S GL P L Y +LI+
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 369 FCKIGRVSSGFVIFGRI--LPSCFTPDAVTFTSLIKIL 404
K R+ + + + + T+ SLI+ L
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 115/302 (38%), Gaps = 38/302 (12%)
Query: 129 NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRV 188
N+L+ C+ G S LGR+ F P T+ LI+ R+ A+ + ++ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 189 FGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK 248
+D FT LC+ G AL L E E V PD + Y+ +I GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCE 314
Query: 249 EAGSANFLGF-SCMASFSALNKMAFYFPLVRVQCLCLN---------------------- 285
+ + F + M + S L + Y L+ C CLN
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLL---CGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 286 ---FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYET 342
F L+ C A +L + + + G MP V YNILI +C D +
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 343 VFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
+ + + G+ + + C C G+ F + ++ F PD T++ ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 403 IL 404
L
Sbjct: 492 YL 493
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 18/223 (8%)
Query: 80 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMG 139
M+ + +P V ++ + +T L L +R+ G+ P+ TY +LI+ CK G
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 140 RVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYN 199
+ +L + ++ + + +I+ E +E+ L ++ + Y
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYR 886
Query: 200 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFS 259
LI+ L + +AL L EE+A F + TY+++I+ LC L
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVAT----FSATLVDYSSTYNSLIESLC--------LANK 934
Query: 260 CMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIA 302
+F ++M + +Q C LI GL + SK+ A
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFC----SLIKGLFRNSKISEA 973
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 74/201 (36%), Gaps = 36/201 (17%)
Query: 2 YPTYKI-------NGRMRFADRLSRKPTSSISENEPSYPTTTATLRLTVKDRASLEQFLK 54
Y TY++ NG + A L + + +PT TA R + E F K
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEM------KQTHWPTHTAGYRKVI------EGFNK 861
Query: 55 ERCKSSGEGDITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFK 114
E +S G D + + P ++ + +L L K + + L L +
Sbjct: 862 EFIESLGLLD---------------EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 115 RLNL--TGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCA 172
+ L TYN LI C +V F + + + P+ +F SLIK L
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 173 ESRIMEAAALFTKLRVFGCEL 193
S+I EA L + C L
Sbjct: 967 NSKISEALLLLDFISHMVCPL 987
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 104 KHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRI--LRSCFTPDAV 161
K + L L + P Y +LI+ K R+ +L + + +
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 162 TFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFE 219
T+ SLI+ LC +++ A LF+++ G ++ ++ +LI GL R AL L +
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 25/331 (7%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+A F M+ + P V +N + + K+ D S+F + GL P+ +TY+IL
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKL-RVFG 190
I+ F K + + V+ ++ S F + V + ++I LC + +A + L +
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
+ +YN++I+G + G T A+ + EM+ NG+ P+ +T++++I+G CK
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE-NGK-----SPNVVTFTSLINGFCK-- 637
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
+N + + +M + ++ + LIDG CK + +K A LF LP
Sbjct: 638 --SNRMDLAL--------EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
GLMPNV YN LI G N G+MD L+K++ + G+ DL+TY +I+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMD------AAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
K G ++ ++ +L PD + L+
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 38/355 (10%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA +++ M+ + + VT+ ++ L + K + V +F+R+ G PD +++
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV-KIFRRVMSRGAEPDGLLFSL 279
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAV-TFTSLIKDLCAESRIMEAAALFTKLRVF 189
+ CK + +L + P + T+TS+I E + EA + ++ F
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
G + V +L+NG C+ AL+LF M E G+ PD + +S +++ CK
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRME----EEGLA--PDKVMFSVMVEWFCKN 393
Query: 250 AGSANFLGF---------------------SCMASFSALNKMAFYFPLVRVQCLCLNFLC 288
+ F C+ + S + + + F+C
Sbjct: 394 MEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMC 452
Query: 289 --LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLL 346
+ CK K+ A + + + G+ PNVV YN ++ C MD + +
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS------I 506
Query: 347 FKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
F + GL P+ +TY+ILI+ F K + + + ++ S F + V + ++I
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII 561
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V +F L K+ D L + + L D Y LI+ FCK + + +
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
+ P+ + SLI ++ A L+ K+ G D+FTY T+I+GL +
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSAL 267
G+ +A +L+ E+ + G+V PD I + +++GL K+ F
Sbjct: 743 DGNINLASDLYSELL----DLGIV--PDEILHMVLVNGLSKK------------GQFLKA 784
Query: 268 NKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
+KM V L + +I G + L A L + G++ + +N+L+ G
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 112/318 (35%), Gaps = 72/318 (22%)
Query: 92 SFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDR-------YTYNILINCFCKMGRVSHG 144
+FN L + K D + F GL DR Y N+L + + +
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCF------GLMVDRKVVPFVPYVNNVL-SSLVRSNLIDEA 223
Query: 145 FVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLING 204
+ +++ D VT L++ E + EA +F ++ G E D ++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 205 LCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASF 264
C+T ++AL+L EM G+ GV + TY+++I KE
Sbjct: 284 ACKTPDLVMALDLLREM---RGKLGVPASQE--TYTSVIVAFVKEGNMEE---------- 328
Query: 265 SALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
VRV + F G+ +V+ L
Sbjct: 329 -----------AVRVMDEMVGF--------------------------GIPMSVIAATSL 351
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
+ G C ++ + LF R+ GL PD +++++ FCK + + R
Sbjct: 352 VNGYCKGNELGKA------LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR 405
Query: 385 ILPSCFTPDAVTFTSLIK 402
+ P +V ++I+
Sbjct: 406 MKSVRIAPSSVLVHTMIQ 423
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 136/296 (45%), Gaps = 34/296 (11%)
Query: 129 NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRV 188
N L+N K+ RV + LR D TF LI+ LC + +A L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 189 FGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCK 248
FGCE D+ TYNTLI G C++ A +F+++ +G+ VC PD +TY+++I G CK
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS-----VCSPDVVTYTSMISGYCK 289
Query: 249 -----EAGSA----------------NFLGFSCMASFSALNKMAFYFPLVRVQCL--CLN 285
EA S N L + L ++ C +
Sbjct: 290 AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 286 FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFL 345
F LIDG C++ ++ L++ + G+ PN TY+ILI LCN+ ++ + +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE------ 403
Query: 346 LFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
L +L S + P + YN +I+ FCK G+V+ VI + PD +TFT LI
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 156/333 (46%), Gaps = 42/333 (12%)
Query: 79 YMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKM 138
+ LN+R S ++N+L L K +D +F+ + G+ P+ L++ F +
Sbjct: 95 FKLNIRHS---FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEK 151
Query: 139 GRVSHGFVVLGRILRSCFTPDA--VTFTSLIKDLCAESRIMEAAALFTK-LRVFGCELDV 195
G++ +L L+S F + + SL+ L R+ +A LF + LR C D
Sbjct: 152 GKLHFATALL---LQS-FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DT 206
Query: 196 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANF 255
T+N LI GLC G AL L M+ G CEPD +TY+T+I G CK
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMS------GFGCEPDIVTYNTLIQGFCKS------ 254
Query: 256 LGFSCMASFSALNKMAFYFPLVRVQCLC----LNFLCLIDGLCKISKLKIARELFQSLPR 311
+ LNK + F V+ +C + + +I G CK K++ A L + R
Sbjct: 255 ---------NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 312 AGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCK 371
G+ P VT+N+L+ G G+M + + F G FPD+ T+ LI+ +C+
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF------GCFPDVVTFTSLIDGYCR 359
Query: 372 IGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+G+VS GF ++ + P+A T++ LI L
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 26/334 (7%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+A+ +FD L + T FNIL L + L L ++ G PD TYN L
Sbjct: 189 DAMKLFDEHLRFQSCNDTKT-FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 132 INCFCKMGRVSHGFVVLGRILR-SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
I FCK ++ + + S +PD VT+TS+I C ++ EA++L + G
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
T+N L++G + G + A EE+ FG C PD +T++++IDG C+
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFG--CFPDVVTFTSLIDGYCRVG 361
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
+ GF +A FP + LI+ LC ++L AREL L
Sbjct: 362 QVSQ--GFRLWEEMNARG----MFPNA------FTYSILINALCNENRLLKARELLGQLA 409
Query: 311 RAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFC 370
++P YN +I G C G+++E ++ + + PD T+ ILI C
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEAN------VIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 371 KIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
GR+ IF +++ +PD +T +SL+ L
Sbjct: 464 MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 135/297 (45%), Gaps = 31/297 (10%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGL-FPDRYTYNILINCFCKMGRVSHGF 145
P + ++N L K+ + +FK + + PD TY +I+ +CK G++
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 146 VVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGL 205
+L +LR P VTF L+ ++ A + K+ FGC DV T+ +LI+G
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 206 CRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA---GSANFLGFSCMA 262
CR G L+EEM N G F P+A TYS +I+ LC E + LG +A
Sbjct: 358 CRVGQVSQGFRLWEEM-NARGMF-----PNAFTYSILINALCNENRLLKARELLGQ--LA 409
Query: 263 SFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYN 322
S + + Y P+ IDG CK K+ A + + + + P+ +T+
Sbjct: 410 SKDIIPQPFMYNPV-------------IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 323 ILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGF 379
ILI G C G+M +E V + F ++ + G PD T + L++C K G +
Sbjct: 457 ILIIGHCMKGRM-----FEAVSI-FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V +F L + L++ +N G+FP+ +TY+ILIN C R+ +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
LG++ P + +I C ++ EA + ++ C+ D T+ LI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIID-----GLCKEAGSAN 254
G A+++F +M + C PD IT S+++ G+ KEA N
Sbjct: 465 KGRMFEAVSIFHKMV------AIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 81 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGR 140
+N R P +++IL L L +L + P + YN +I+ FCK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
V+ V++ + + PD +TFT LI C + R+ EA ++F K+ GC D T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 201 LINGLCRTGHTIVALNL 217
L++ L + G A +L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 36/354 (10%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
+EA +FD M + RP +++IL + DT LS + TGL Y YN
Sbjct: 384 HEAELLFDRMGKI-GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LIN CK G +S + ++ P VT+TSL+ C++ +I +A L+ ++ G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
++T+ TL++GL R G A+ LF EMA N +P+ +TY+ +I+G C+E
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEG 556
Query: 251 G-SANFLGFSCMASFSALNKMAFYFPLVRVQCLC-------------------LNFLC-- 288
S F M + Y PL+ CL LN +C
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 289 -LIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLF 347
L+ G C+ KL+ A + Q + + G+ ++V Y +LI DG + + K + F L
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI-----DGSL-KHKDRKLFFGLL 670
Query: 348 KRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
K ++ GL PD Y +I+ K G F I+ ++ P+ VT+T++I
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 141/333 (42%), Gaps = 30/333 (9%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+ + VF M+ P V + + L L K +H+ + LF + G+ PD Y Y +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
I C++ +S ++ + + + V + LI LC + ++ EA + L
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---EPDAITYSTIIDGLCK 248
+ DV TY TL+ GLC+ + L + +EM +C P S++++GL K
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM---------LCLRFSPSEAAVSSLVEGLRK 344
Query: 249 EAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQS 308
L ++ F + LID LCK K A LF
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYN------------ALIDSLCKGRKFHEAELLFDR 392
Query: 309 LPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINC 368
+ + GL PN VTY+ILI C G++D T + TGL +Y YN LIN
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLD------TALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 369 FCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
CK G +S+ ++ P VT+TSL+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 36/357 (10%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
N+AL ++ M + P + +F L L + + LF + + P+R TYN+
Sbjct: 489 NKALRLYHEMTG-KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
+I +C+ G +S F L + PD ++ LI LC + EA L
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
CEL+ Y L++G CR G AL++ +EM + +VC Y +IDG K
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC------YGVLIDGSLKHK 661
Query: 251 GSANFLG----------------FSCMASFSALN---KMAFYFPLVRVQCLCL----NFL 287
F G ++ M + K AF + + C+ +
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 288 CLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLF 347
+I+GLCK + A L + +PN VTY + + G++D K E +
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAIL 780
Query: 348 KRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
K GL + TYN+LI FC+ GR+ + R++ +PD +T+T++I L
Sbjct: 781 K-----GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 58/364 (15%)
Query: 72 EALCVFDYM--LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
+A+ +F+ M N++P+R ++N++ + K + G+ PD Y+Y
Sbjct: 525 DAVKLFNEMAEWNVKPNR---VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
LI+ C G+ S V + + + + + +T L+ C E ++ EA ++ ++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMAN------------------GNGEF--- 228
G +LD+ Y LI+G + + L +EM + G+F
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 229 -GVV-------CEPDAITYSTIIDGLCKEAGSANFLGFSC--MASFSALNKMAFYFPLVR 278
G+ C P+ +TY+ +I+GLCK AG N C M S++ Y
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCK-AGFVNEAEVLCSKMQPVSSVPNQVTYG---- 756
Query: 279 VQCLCLNFLCLIDGLCKIS-KLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDET 337
C +D L K ++ A EL ++ + GL+ N TYN+LIRG C G+++E
Sbjct: 757 ---------CFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEA 806
Query: 338 KHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTF 397
L R+ G+ PD TY +IN C+ V ++ + PD V +
Sbjct: 807 SE------LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 398 TSLI 401
+LI
Sbjct: 861 NTLI 864
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 113/323 (34%), Gaps = 95/323 (29%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
EAL V M+ R + + +L K K L K ++ GL PD Y
Sbjct: 629 EEALSVCQEMVQ-RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLR--- 187
+I+ K G F + ++ P+ VT+T++I LC + EA L +K++
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 188 ------VFGCELDVFT--------------------------YNTLINGLCRTGHTIVAL 215
+GC LD+ T YN LI G CR G A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 216 NLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYFP 275
L M G+G PD ITY+T+I+ LC+
Sbjct: 808 ELITRMI-GDG-----VSPDCITYTTMINELCRR-------------------------- 835
Query: 276 LVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMD 335
+ +K A EL+ S+ G+ P+ V YN LI G C G+M
Sbjct: 836 ---------------------NDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 336 ETKHYETVFLLFKRLNSTGLFPD 358
+ L GL P+
Sbjct: 875 KATELRNEML------RQGLIPN 891
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 126/337 (37%), Gaps = 80/337 (23%)
Query: 70 PNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYN 129
P L F+++ R SF IL L K + SL + L L L P +N
Sbjct: 84 PKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSD-VFN 142
Query: 130 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
+L +C+ K C + +F LI+ R+++ +F K+ +
Sbjct: 143 VLFSCYEK-----------------CKLSSSSSFDLLIQHYVRSRRVLDGVLVF-KMMIT 184
Query: 190 GCEL--DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLC 247
L +V T + L++GL + H +A+ LF +M + V PD Y+ +I L
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS------VGIRPDVYIYTGVIRSL- 237
Query: 248 KEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQ 307
C++ L A+E+
Sbjct: 238 ----------------------------------------------CELKDLSRAKEMIA 251
Query: 308 SLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILIN 367
+ G N+V YN+LI GLC + K +E V + K L L PD+ TY L+
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCK-----KQKVWEAVGIK-KDLAGKDLKPDVVTYCTLVY 305
Query: 368 CFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
CK+ G + +L F+P +SL++ L
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 26/337 (7%)
Query: 65 ITSITPNEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPD 124
+ S + N ++ F+ M++ P FN L + + ++ S F N + + D
Sbjct: 105 VQSQSLNLSISYFNEMVD-NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLD 162
Query: 125 RYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFT 184
Y++ ILI C+ G + F +L + F+P+ V +T+LI C + I +A LF
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 185 KLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIID 244
++ G + TY LINGL + G ++E+M E GV P+ TY+ +++
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ----EDGVF--PNLYTYNCVMN 276
Query: 245 GLCKEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARE 304
LCK+ + + +F ++M V C + + LI GLC+ KL A +
Sbjct: 277 QLCKDGRTKD--------AFQVFDEMRER----GVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 305 LFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNI 364
+ + G+ PN++TYN LI G C G++ + L + L S GL P L TYNI
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGK------ALSLCRDLKSRGLSPSLVTYNI 378
Query: 365 LINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
L++ FC+ G S + + P VT+T LI
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 24/313 (7%)
Query: 92 SFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRI 151
++ +L L K +++++ G+FP+ YTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 152 LRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHT 211
+ + VT+ +LI LC E ++ EA + +++ G ++ TYNTLI+G C G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 212 IVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMA 271
AL+L ++ + P +TY+ ++ G C++ + S KM
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDT------------SGAAKMV 396
Query: 272 FYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCND 331
++ + + LID + ++ A +L S+ GL+P+V TY++LI G C
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 332 GQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFT 391
GQM+E LFK + P+ YN +I +CK G + +
Sbjct: 457 GQMNEASR------LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 392 PDAVTFTSLIKIL 404
P+ ++ +I++L
Sbjct: 511 PNVASYRYMIEVL 523
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 19/257 (7%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
NEA V D M P + ++N L LSL + L GL P TYNI
Sbjct: 320 NEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
L++ FC+ G S ++ + P VT+T LI + +A L + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
DV TY+ LI+G C G A LF+ M N CEP+ + Y+T+I G CKE
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN------CEPNEVIYNTMILGYCKEG 492
Query: 251 GSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLP 310
+S+ AL K+ + ++ +I+ LCK K K A L + +
Sbjct: 493 -----------SSYRAL-KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 311 RAGLMPNVVTYNILIRG 327
+G+ P+ +++ R
Sbjct: 541 DSGIDPSTSILSLISRA 557
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 28/317 (8%)
Query: 87 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFV 146
+P V + I L + + +F+ + G+ P+ YTY+ +I+ +CK G V +
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 147 VLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLC 206
+ IL + P+ V F +L+ C ++ A +LF + FG + +++ YN LI+G C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350
Query: 207 RTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE--AGSANFLGFSCMASF 264
++G+ + A+ L EM + N PD TY+ +I+GLC E AN L F M +
Sbjct: 351 KSGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRL-FQKMKNE 403
Query: 265 SALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNIL 324
A Y LI G CK ++ A +L + +G+ PN++T++ L
Sbjct: 404 RIFPSSATYNS-------------LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 325 IRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGR 384
I G CN + + L+ + G+ PD+ TY LI+ K + ++
Sbjct: 451 IDGYCN------VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 385 ILPSCFTPDAVTFTSLI 401
+L + P+ TF L+
Sbjct: 505 MLEAGIHPNDHTFACLV 521
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 33/324 (10%)
Query: 82 NMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRV 141
M+ S +IL G L + + +D+V ++ + GL PD + Y +L C K G
Sbjct: 157 EMKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 142 SHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTL 201
S +L + P+ +T I DLC ++++ EA +F ++ G +++TY+ +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 202 INGLCRTGHTIVALNLFEEMANGNGEFGVVCE--PDAITYSTIIDGLCK--EAGSANFLG 257
I+G C+TG+ A L++E+ +V E P+ + + T++DG CK E +A L
Sbjct: 276 IDGYCKTGNVRQAYGLYKEI--------LVAELLPNVVVFGTLVDGFCKARELVTARSL- 326
Query: 258 FSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPN 317
F M F + Y CLI G CK + A L + L P+
Sbjct: 327 FVHMVKFGVDPNLYVYN-------------CLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 318 VVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSS 377
V TY ILI GLC + Q+ E LF+++ + +FP TYN LI+ +CK +
Sbjct: 374 VFTYTILINGLCIEDQVAEANR------LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 378 GFVIFGRILPSCFTPDAVTFTSLI 401
+ + S P+ +TF++LI
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLI 451
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 142/349 (40%), Gaps = 70/349 (20%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V F L K + T SLF + G+ P+ Y YN LI+ CK G + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKL---RVF--------------- 189
L + +PD T+T LI LC E ++ EA LF K+ R+F
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 190 -----------------GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 232
G E ++ T++TLI+G C A+ L+ EM G+V
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK----GIV- 476
Query: 233 EPDAITYSTIIDGLCKEAGSANFL----------------GFSCMAS-FSALNKMAF--- 272
PD +TY+ +ID KEA L F+C+ F +++
Sbjct: 477 -PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 273 YFPLVRVQCLCLN---FLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLC 329
++ Q C N F CLI+GLC+ + A F + G+ P++ +Y +++G
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 330 NDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSG 378
+ ++ +T +L + TG+ P+L +L + G V S
Sbjct: 596 QEKRITDT------MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 44/289 (15%)
Query: 123 PDRYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAAL 182
P+ +Y+ILI+ C++GR+ F + ++ P T+T LIK LC I +A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 183 FTKLRVFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCE--------P 234
F ++ GC+ +V TY LI+GLCR G E ANG VC P
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKI--------EEANG------VCRKMVKDRIFP 369
Query: 235 DAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFYF--PLVRVQCLCLNFLCLIDG 292
ITY+ +I+G CK+ + +F L M P VR F L++G
Sbjct: 370 SVITYNALINGYCKDG--------RVVPAFELLTVMEKRACKPNVR------TFNELMEG 415
Query: 293 LCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNS 352
LC++ K A L + + GL P++V+YN+LI GLC +G M+ T + L +N
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN------TAYKLLSSMNC 469
Query: 353 TGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
+ PD T+ +IN FCK G+ G +L + D VT T+LI
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 172/390 (44%), Gaps = 71/390 (18%)
Query: 71 NEALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNI 130
EA + D M + +P ++ +L L D +LF + G P+ +TY +
Sbjct: 283 EEAFGLKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 131 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFG 190
LI+ C+ G++ V ++++ P +T+ +LI C + R++ A L T +
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 191 CELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEA 250
C+ +V T+N L+ GLCR G A++L + M + NG PD ++Y+ +IDGLC+E
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREG 455
Query: 251 ---------GSANFLGFS--CMASFSALNK---------MAFYFPLVRVQCLCLNFL--- 287
S N C+ + +N + + L+ + + L+ +
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 288 CLIDGLCKISKLKIARELFQSLPRA----------------------------------- 312
LIDG+CK+ K + A + ++L +
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Query: 313 GLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKI 372
GL+P+VVTY L+ GL G + + F + + + +G P++Y Y I+IN C+
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGS------FRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 373 GRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
GRV + + S +P+ VT+T ++K
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 149/340 (43%), Gaps = 73/340 (21%)
Query: 113 FKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILRSCF---------------- 156
++R+ G Y ++N CK G + + +IL+ F
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 157 --------------------TPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVF 196
P++V+++ LI LC R+ EA L ++ GC+
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 197 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFL 256
TY LI LC G A NLF+EM C+P+ TY+ +IDGLC++
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 257 GFSCMASFSALNKMA--FYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGL 314
G KM FP V + + LI+G CK ++ A EL + +
Sbjct: 357 GVC--------RKMVKDRIFPSV------ITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 315 MPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGR 374
PNV T+N L+ GLC G K Y+ V LL KR+ GL PD+ +YN+LI+ C+ G
Sbjct: 403 KPNVRTFNELMEGLCRVG-----KPYKAVHLL-KRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 375 VSSGFVIFGRILPSCF--TPDAVTFTSLIKILEINSFFRQ 412
+++ + + + +CF PD +TFT++ IN+F +Q
Sbjct: 457 MNTAYKLLSSM--NCFDIEPDCLTFTAI-----INAFCKQ 489
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 116/277 (41%), Gaps = 23/277 (8%)
Query: 128 YNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLR 187
Y+ L+ K+ +V R+ F + + +++ LC A +K+
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 188 VFGCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLC 247
G LD +L+ G CR + AL +F+ M+ V C P++++YS +I GLC
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE-----VTCAPNSVSYSILIHGLC 277
Query: 248 KEAGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQ 307
+ G P R + LI LC + A LF
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQ------PSTR------TYTVLIKALCDRGLIDKAFNLFD 325
Query: 308 SLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILIN 367
+ G PNV TY +LI GLC DG+++E + +++ +FP + TYN LIN
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG------VCRKMVKDRIFPSVITYNALIN 379
Query: 368 CFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIKIL 404
+CK GRV F + + P+ TF L++ L
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 26/326 (7%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
+AL + + ++ MR P S N++ L+K L++ ++N GL P TY L
Sbjct: 529 DALFILETLVKMRILTTP-HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 132 INCFCKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGC 191
++ + G ++ F +L + S P+ +T +I LC R+ EA L + ++ G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 192 ELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAG 251
+ TY ++ G G AL M E D I YS+++ G
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN-----DRI-YSSLLQGFVLSQK 701
Query: 252 SANFLGFSCMASFS-------ALNKMAFYFPLVRVQCLCLNFLC--LIDGLCKISKLKIA 302
+ S ++ + +N++ +V C++ LC L+ LCK + +
Sbjct: 702 GIDNSEESTVSDIALRETDPECINEL---ISVVEQLGGCISGLCIFLVTRLCKEGRTDES 758
Query: 303 RELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTY 362
+L Q++ G+ +I++ C+ + TK E + L+ K +G P ++
Sbjct: 759 NDLVQNVLERGVFLE-KAMDIIMESYCSKKK--HTKCMELITLVLK----SGFVPSFKSF 811
Query: 363 NILINCFCKIGRVSSGFVIFGRILPS 388
++I K G + +L S
Sbjct: 812 CLVIQGLKKEGDAERARELVMELLTS 837
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 27/333 (8%)
Query: 72 EALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNIL 131
EAL + + M+ + P ++NI+ L K + + + + PD TYNIL
Sbjct: 335 EALQLLNLMIE-KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 132 INCFCKMGRVSHGFVVLGRILR-SCFT-PDAVTFTSLIKDLCAESRIMEAAALFTKLRVF 189
+ C G + +L +L+ S +T PD +++ +LI LC E+R+ +A ++ L
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 190 GCELDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE 249
D T N L+N + G A+ L++++++ +V D TY+ +IDG CK
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK----IVRNSD--TYTAMIDGFCKT 507
Query: 250 AGSANFLGFSCMASFSALNKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSL 309
G C S L F ++ CL+ LCK L A LF+ +
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVF------------DYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 310 PRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCF 369
R P+VV++NI+I G G + K E++ + R GL PDL+TY+ LIN F
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDI---KSAESLLVGMSR---AGLSPDLFTYSKLINRF 609
Query: 370 CKIGRVSSGFVIFGRILPSCFTPDAVTFTSLIK 402
K+G + F +++ S F PDA S++K
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 34/349 (9%)
Query: 76 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCF 135
+FD +L R P ++N L K +F+ + G+ P+ YTY LI+
Sbjct: 269 LFDEVLE-RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 136 CKMGRVSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDV 195
C +G+ +L ++ P+AVT+ +I LC + + +A + ++ D
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 196 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKE------ 249
TYN L+ GLC G A L M + +PD I+Y+ +I GLCKE
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443
Query: 250 ------------AG---SANFLGFSCMASFSALNKMAFYFPLVRVQCL--CLNFLCLIDG 292
AG + N L S + + M + + + + + +IDG
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 293 LCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQMDETKHYETVFLLFKRLNS 352
CK L +A+ L + + L P+V YN L+ LC +G +D+ + LF+ +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA------WRLFEEMQR 557
Query: 353 TGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPDAVTFTSLI 401
FPD+ ++NI+I+ K G + S + + + +PD T++ LI
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 24/311 (7%)
Query: 94 NILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLGRILR 153
N L L ++++++ S ++++ T F + + + L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 154 SCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTGHTIV 213
F + L+K LC +A +L ++R DVF+YNT+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 214 ALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALNKMAFY 273
AL L EM G+G C +T+ +ID CK +GF L +M F
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGF--------LKEMKF- 240
Query: 274 FPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRGLCNDGQ 333
+ ++ + + LI G C +L + LF + G P +TYN LIRG C GQ
Sbjct: 241 ---MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 334 MDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILPSCFTPD 393
+ E +F+ + G+ P++YTY LI+ C +G+ + ++ P+
Sbjct: 298 LKEASE------IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 394 AVTFTSLIKIL 404
AVT+ +I L
Sbjct: 352 AVTYNIIINKL 362
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 142/316 (44%), Gaps = 30/316 (9%)
Query: 90 VTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVLG 149
V + NIL L + +SL + + L PD ++YN +I FC+ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 150 RILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRTG 209
+ S + VT+ LI C ++ EA +++ G E D+ Y +LI G C G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 210 HTIVALNLFEE-MANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALN 268
LF+E + G+ P AITY+T+I G CK LG AS
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCK-------LGQLKEAS----- 302
Query: 269 KMAFYFPLVR-VQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
F F + R V+ + LIDGLC + K K A +L + PN VTYNI+I
Sbjct: 303 -EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 328 LCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILP 387
LC DG + + E V L+ KR PD TYNIL+ C G + + +L
Sbjct: 362 LCKDGLVADA--VEIVELMKKRRTR----PDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 388 -SCFT-PDAVTFTSLI 401
S +T PD +++ +LI
Sbjct: 416 DSSYTDPDVISYNALI 431
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 148/334 (44%), Gaps = 29/334 (8%)
Query: 88 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVV 147
P V S+N + + K + L L + +G T+ ILI+ FCK G++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 148 LGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCR 207
L + D V +TSLI+ C + ALF ++ G TYNTLI G C+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 208 TGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSAL 267
G A +FE M E GV P+ TY+ +IDGLC + L +
Sbjct: 295 LGQLKEASEIFEFMI----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 268 NKMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLMPNVVTYNILIRG 327
A + ++ I+ LCK + A E+ + + + P+ +TYNIL+ G
Sbjct: 349 EPNAVTYNII------------INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 328 LCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRILP 387
LC G +DE + ++L+ K +S+ PD+ +YN LI+ CK R+ I+ ++
Sbjct: 397 LCAKGDLDEAS--KLLYLMLK--DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 388 SCFTPDAVT----FTSLIKILEIN---SFFRQVA 414
D VT S +K ++N ++Q++
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 89 PVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGRVSHGFVVL 148
+ ++ IL K D + K + GL D Y LI FC G + G +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 149 GRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNTLINGLCRT 208
+L +P A+T+ +LI+ C ++ EA+ +F + G +V+TY LI+GLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 209 GHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANFLGFSCMASFSALN 268
G T AL L M + EP+A+TY+ II+ LCK+ A+ +
Sbjct: 331 GKTKEALQLLNLMIEKDE------EPNAVTYNIIINKLCKDGLVADAV------------ 372
Query: 269 KMAFYFPLVRVQCLCLNFLCLIDGLCKISKLKIARELFQSLPRAGLM--PNVVTYNILIR 326
++ R + + + L+ GLC L A +L + + P+V++YN LI
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 327 GLCNDGQMDETKHYETVFLLFKRLNSTGLFPDLYTYNILINCFCKIGRVSSGFVIFGRIL 386
GLC + ++ + + LL ++L + D T NIL+N K G V+ ++ +I
Sbjct: 433 GLCKENRLHQA--LDIYDLLVEKLGA----GDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 387 PSCFTPDAVTFTSLI 401
S ++ T+T++I
Sbjct: 487 DSKIVRNSDTYTAMI 501
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 83 MRPS--RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNLTGLFPDRYTYNILINCFCKMGR 140
MR S +P V +N L L K D LF+ + FPD ++NI+I+ K G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 141 VSHGFVVLGRILRSCFTPDAVTFTSLIKDLCAESRIMEAAALFTKLRVFGCELDVFTYNT 200
+ +L + R+ +PD T++ LI + EA + F K+ G E D ++
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 201 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCEPDAITYSTIIDGLCKEAGSANF 255
++ G T L +++ + + +V + + T++D +C + + +
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKD----IVLDKELTC--TVMDYMCNSSANMDL 688
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.142 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,924,087
Number of Sequences: 539616
Number of extensions: 5669821
Number of successful extensions: 23006
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 14014
Number of HSP's gapped (non-prelim): 2867
length of query: 414
length of database: 191,569,459
effective HSP length: 120
effective length of query: 294
effective length of database: 126,815,539
effective search space: 37283768466
effective search space used: 37283768466
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)