Query 043192
Match_columns 316
No_of_seqs 153 out of 1622
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 13:51:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043192.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043192hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 6.9E-41 1.5E-45 287.7 27.7 296 7-313 28-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 6.6E-36 1.4E-40 261.1 25.3 256 39-313 55-315 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 1.3E-32 2.7E-37 240.7 25.9 248 46-312 58-309 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 2.6E-32 5.7E-37 225.6 13.3 203 71-290 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 9.8E-26 2.1E-30 213.0 22.6 241 36-314 360-617 (620)
6 TIGR02821 fghA_ester_D S-formy 99.9 8.6E-21 1.9E-25 162.8 23.6 228 41-313 13-274 (275)
7 PF00326 Peptidase_S9: Prolyl 99.9 1.3E-22 2.8E-27 167.9 11.6 188 92-313 5-209 (213)
8 KOG1455 Lysophospholipase [Lip 99.9 4.2E-21 9.1E-26 158.6 20.1 234 49-313 37-312 (313)
9 PLN02298 hydrolase, alpha/beta 99.9 1.9E-20 4.1E-25 165.3 20.9 242 38-314 29-318 (330)
10 PLN02385 hydrolase; alpha/beta 99.9 1.6E-20 3.5E-25 166.8 20.5 234 49-314 71-346 (349)
11 PRK10566 esterase; Provisional 99.9 2.6E-20 5.5E-25 157.9 20.2 217 51-313 11-248 (249)
12 PRK13604 luxD acyl transferase 99.9 2.3E-20 5E-25 158.4 19.0 208 44-290 14-246 (307)
13 PHA02857 monoglyceride lipase; 99.9 5.1E-20 1.1E-24 158.5 21.3 229 48-313 9-273 (276)
14 PRK10115 protease 2; Provision 99.9 9.3E-20 2E-24 173.6 24.4 239 38-312 413-674 (686)
15 PLN02442 S-formylglutathione h 99.9 1.3E-19 2.9E-24 155.9 21.8 227 42-312 19-279 (283)
16 PF01738 DLH: Dienelactone hyd 99.8 1.3E-19 2.8E-24 150.4 17.9 193 53-313 2-217 (218)
17 PRK10749 lysophospholipase L2; 99.8 4.6E-19 1E-23 156.2 22.0 233 49-314 40-330 (330)
18 PLN02652 hydrolase; alpha/beta 99.8 5.2E-19 1.1E-23 158.3 21.1 230 49-313 120-387 (395)
19 COG0412 Dienelactone hydrolase 99.8 1.8E-18 3.8E-23 144.1 22.1 204 42-314 3-234 (236)
20 KOG4627 Kynurenine formamidase 99.8 3.5E-20 7.6E-25 143.9 9.9 203 38-288 42-247 (270)
21 PRK05077 frsA fermentation/res 99.8 3.1E-18 6.6E-23 154.5 22.4 230 41-313 168-412 (414)
22 COG2267 PldB Lysophospholipase 99.8 1.2E-18 2.5E-23 150.3 18.7 230 49-314 19-295 (298)
23 KOG1552 Predicted alpha/beta h 99.8 8.6E-19 1.9E-23 142.2 16.6 208 43-313 39-252 (258)
24 KOG2100 Dipeptidyl aminopeptid 99.8 9E-19 2E-23 167.4 19.1 237 38-312 497-746 (755)
25 PF10340 DUF2424: Protein of u 99.8 1E-17 2.2E-22 145.1 21.6 221 51-290 105-351 (374)
26 COG1647 Esterase/lipase [Gener 99.8 2.1E-18 4.5E-23 136.1 13.0 206 69-312 16-243 (243)
27 PRK11460 putative hydrolase; P 99.8 3.5E-17 7.7E-22 136.7 19.3 172 66-312 14-207 (232)
28 TIGR03100 hydr1_PEP hydrolase, 99.8 1.5E-17 3.3E-22 142.7 17.3 235 43-312 4-274 (274)
29 KOG4388 Hormone-sensitive lipa 99.8 9.8E-18 2.1E-22 148.4 15.3 123 53-190 384-506 (880)
30 PLN00021 chlorophyllase 99.8 1.9E-16 4.1E-21 137.3 22.6 205 39-290 24-242 (313)
31 PF12695 Abhydrolase_5: Alpha/ 99.8 2.7E-17 5.9E-22 127.3 15.7 143 70-288 1-145 (145)
32 PLN02511 hydrolase 99.8 6.6E-17 1.4E-21 145.2 20.1 154 16-193 51-211 (388)
33 TIGR01840 esterase_phb esteras 99.8 4.1E-17 8.9E-22 134.7 17.1 181 55-271 2-197 (212)
34 PRK00870 haloalkane dehalogena 99.8 1.7E-16 3.7E-21 138.4 21.0 238 40-313 20-301 (302)
35 PLN02824 hydrolase, alpha/beta 99.7 4.1E-16 8.9E-21 135.4 21.7 233 37-313 6-294 (294)
36 TIGR03343 biphenyl_bphD 2-hydr 99.7 2.3E-16 5.1E-21 136.0 19.9 210 68-312 30-282 (282)
37 PF02230 Abhydrolase_2: Phosph 99.7 7.2E-17 1.6E-21 133.6 15.5 112 147-313 101-215 (216)
38 PRK10985 putative hydrolase; P 99.7 2.5E-16 5.5E-21 138.4 17.8 152 16-193 11-169 (324)
39 TIGR01607 PST-A Plasmodium sub 99.7 6.9E-16 1.5E-20 135.9 18.0 248 49-312 7-332 (332)
40 PRK10673 acyl-CoA esterase; Pr 99.7 2.8E-15 6E-20 127.3 21.2 211 66-313 14-255 (255)
41 TIGR01250 pro_imino_pep_2 prol 99.7 2.4E-15 5.1E-20 129.3 20.8 102 67-192 24-131 (288)
42 TIGR02240 PHA_depoly_arom poly 99.7 9.9E-16 2.2E-20 131.8 17.4 207 69-314 26-267 (276)
43 TIGR03611 RutD pyrimidine util 99.7 1.3E-15 2.7E-20 129.0 17.8 208 67-312 12-257 (257)
44 TIGR03056 bchO_mg_che_rel puta 99.7 2.3E-15 5.1E-20 129.2 19.6 205 68-311 28-278 (278)
45 KOG2281 Dipeptidyl aminopeptid 99.7 1.1E-15 2.3E-20 137.1 17.6 229 47-312 621-866 (867)
46 TIGR03695 menH_SHCHC 2-succiny 99.7 1.8E-15 3.8E-20 127.0 17.6 209 69-311 2-251 (251)
47 KOG4391 Predicted alpha/beta h 99.7 7.5E-16 1.6E-20 121.0 13.0 228 37-314 50-283 (300)
48 COG2272 PnbA Carboxylesterase 99.7 7.2E-17 1.6E-21 142.3 7.9 131 47-193 75-218 (491)
49 PLN02894 hydrolase, alpha/beta 99.7 1.2E-14 2.5E-19 131.2 22.4 100 66-192 103-211 (402)
50 TIGR02427 protocat_pcaD 3-oxoa 99.7 6.9E-16 1.5E-20 129.7 13.2 207 67-311 12-251 (251)
51 PRK03592 haloalkane dehalogena 99.7 2.5E-15 5.4E-20 130.5 16.3 209 68-314 27-290 (295)
52 PLN02965 Probable pheophorbida 99.7 9.3E-15 2E-19 124.3 19.2 206 70-312 5-252 (255)
53 PF00135 COesterase: Carboxyle 99.7 2.3E-16 4.9E-21 148.3 10.2 131 48-192 105-245 (535)
54 COG2945 Predicted hydrolase of 99.7 1E-14 2.3E-19 112.8 16.9 195 42-311 5-205 (210)
55 COG0400 Predicted esterase [Ge 99.7 3.5E-15 7.7E-20 120.6 15.0 175 66-313 16-205 (207)
56 PRK06489 hypothetical protein; 99.7 3.1E-15 6.7E-20 133.5 16.2 132 36-191 31-188 (360)
57 cd00312 Esterase_lipase Estera 99.7 3.8E-16 8.3E-21 145.2 10.0 131 47-193 74-214 (493)
58 PRK11071 esterase YqiA; Provis 99.7 2E-14 4.3E-19 116.2 18.6 178 69-311 2-189 (190)
59 TIGR01836 PHA_synth_III_C poly 99.7 1.8E-14 3.9E-19 128.1 19.8 131 39-195 36-174 (350)
60 PLN02679 hydrolase, alpha/beta 99.6 2.9E-14 6.2E-19 127.2 20.7 212 68-314 88-358 (360)
61 PRK11126 2-succinyl-6-hydroxy- 99.6 6.3E-15 1.4E-19 124.1 15.1 205 68-312 2-241 (242)
62 TIGR01738 bioH putative pimelo 99.6 6.9E-15 1.5E-19 123.2 15.3 203 68-310 4-245 (245)
63 PF05448 AXE1: Acetyl xylan es 99.6 2.5E-15 5.4E-20 130.5 12.6 232 36-313 51-320 (320)
64 PRK14875 acetoin dehydrogenase 99.6 9.7E-15 2.1E-19 130.9 16.6 208 67-313 130-371 (371)
65 PLN03087 BODYGUARD 1 domain co 99.6 6E-14 1.3E-18 127.7 20.6 115 51-192 187-309 (481)
66 PRK03204 haloalkane dehalogena 99.6 2.4E-14 5.3E-19 123.7 16.6 99 68-192 34-136 (286)
67 PRK10349 carboxylesterase BioH 99.6 2.2E-14 4.8E-19 122.0 15.7 206 69-312 14-255 (256)
68 PF10503 Esterase_phd: Esteras 99.6 4.2E-14 9.1E-19 115.5 16.0 120 52-192 1-132 (220)
69 KOG1838 Alpha/beta hydrolase [ 99.6 1.8E-13 3.8E-18 119.3 20.6 267 16-312 73-387 (409)
70 KOG4409 Predicted hydrolase/ac 99.6 4.2E-14 9E-19 119.6 15.3 217 66-312 88-363 (365)
71 TIGR03101 hydr2_PEP hydrolase, 99.6 3.8E-14 8.2E-19 119.8 15.0 227 51-308 11-263 (266)
72 PRK07581 hypothetical protein; 99.6 3.2E-14 6.9E-19 126.1 14.9 130 38-192 9-159 (339)
73 COG4099 Predicted peptidase [G 99.6 8.3E-15 1.8E-19 120.4 10.0 176 49-283 171-354 (387)
74 PLN02578 hydrolase 99.6 1E-13 2.3E-18 123.4 16.9 96 69-191 87-186 (354)
75 PF12740 Chlorophyllase2: Chlo 99.6 5.4E-13 1.2E-17 110.4 18.9 130 51-193 3-132 (259)
76 PLN02211 methyl indole-3-aceta 99.6 3.1E-13 6.6E-18 115.9 18.0 102 66-192 16-122 (273)
77 PF08840 BAAT_C: BAAT / Acyl-C 99.6 4.3E-14 9.4E-19 116.2 12.0 175 121-314 3-211 (213)
78 TIGR01249 pro_imino_pep_1 prol 99.6 2.3E-13 5E-18 118.8 17.2 98 69-192 28-130 (306)
79 PF12697 Abhydrolase_6: Alpha/ 99.6 1.3E-13 2.9E-18 113.8 14.9 189 71-291 1-219 (228)
80 PRK10439 enterobactin/ferric e 99.6 1.2E-12 2.6E-17 117.7 21.8 202 42-292 181-395 (411)
81 COG0429 Predicted hydrolase of 99.5 4.1E-13 8.9E-18 113.1 16.6 127 40-190 50-183 (345)
82 TIGR01392 homoserO_Ac_trn homo 99.5 5E-13 1.1E-17 119.0 18.1 66 238-311 283-351 (351)
83 KOG4178 Soluble epoxide hydrol 99.5 2.3E-12 5E-17 108.8 20.5 124 36-191 19-147 (322)
84 PLN03084 alpha/beta hydrolase 99.5 7.1E-13 1.5E-17 118.2 17.9 100 67-192 126-232 (383)
85 PF06500 DUF1100: Alpha/beta h 99.5 5.2E-13 1.1E-17 117.2 15.8 229 41-313 167-409 (411)
86 COG3458 Acetyl esterase (deace 99.5 5.8E-14 1.3E-18 114.2 8.8 243 12-290 24-302 (321)
87 PLN02980 2-oxoglutarate decarb 99.5 7.7E-13 1.7E-17 137.2 19.3 240 40-313 1345-1639(1655)
88 TIGR00976 /NonD putative hydro 99.5 3.2E-12 6.9E-17 120.2 20.4 125 48-195 5-135 (550)
89 KOG1454 Predicted hydrolase/ac 99.5 2.3E-12 4.9E-17 112.5 17.5 213 66-314 56-325 (326)
90 PLN02872 triacylglycerol lipas 99.5 8.6E-13 1.9E-17 118.0 15.1 137 38-192 41-197 (395)
91 KOG3101 Esterase D [General fu 99.5 1.6E-13 3.6E-18 107.4 9.1 215 51-292 27-265 (283)
92 PRK00175 metX homoserine O-ace 99.5 1.6E-12 3.6E-17 116.7 16.5 69 238-314 304-375 (379)
93 KOG3043 Predicted hydrolase re 99.5 1.7E-12 3.8E-17 103.0 13.9 178 69-314 40-241 (242)
94 PRK08775 homoserine O-acetyltr 99.5 9.4E-13 2E-17 116.8 13.5 66 238-314 272-340 (343)
95 PF12715 Abhydrolase_7: Abhydr 99.4 1.5E-13 3.4E-18 118.5 6.7 210 38-285 85-344 (390)
96 KOG2564 Predicted acetyltransf 99.4 1.8E-12 3.8E-17 106.1 11.5 121 41-188 50-178 (343)
97 PRK05371 x-prolyl-dipeptidyl a 99.4 2.8E-11 6.1E-16 116.7 21.5 198 95-313 273-519 (767)
98 PF05728 UPF0227: Uncharacteri 99.4 1.4E-11 3E-16 98.5 15.6 183 70-311 1-187 (187)
99 PF00756 Esterase: Putative es 99.4 2.1E-13 4.6E-18 115.6 4.6 201 49-292 5-240 (251)
100 KOG4667 Predicted esterase [Li 99.4 2.9E-11 6.3E-16 95.3 16.1 186 67-291 32-242 (269)
101 PF02129 Peptidase_S15: X-Pro 99.4 3.9E-12 8.6E-17 109.1 11.9 212 49-288 2-271 (272)
102 KOG2984 Predicted hydrolase [G 99.4 2.3E-13 5E-18 106.0 3.6 206 70-313 44-276 (277)
103 COG3509 LpqC Poly(3-hydroxybut 99.3 1.1E-10 2.3E-15 97.0 17.3 132 42-192 36-179 (312)
104 PF07224 Chlorophyllase: Chlor 99.3 6.3E-11 1.4E-15 96.4 15.5 130 50-195 31-160 (307)
105 COG3571 Predicted hydrolase of 99.3 4.5E-10 9.8E-15 84.5 17.5 183 67-312 13-210 (213)
106 COG1770 PtrB Protease II [Amin 99.3 5.2E-11 1.1E-15 108.5 14.8 224 38-290 416-658 (682)
107 KOG2112 Lysophospholipase [Lip 99.3 1.5E-10 3.2E-15 91.5 15.0 129 122-312 72-203 (206)
108 COG1505 Serine proteases of th 99.3 1.1E-10 2.3E-15 105.3 15.9 226 48-313 403-646 (648)
109 COG3208 GrsT Predicted thioest 99.3 4.5E-10 9.7E-15 91.2 17.9 211 67-311 6-234 (244)
110 TIGR01838 PHA_synth_I poly(R)- 99.3 3.2E-10 6.9E-15 104.6 19.2 132 43-195 166-305 (532)
111 PF08538 DUF1749: Protein of u 99.3 1.7E-11 3.8E-16 103.4 9.2 227 67-311 32-303 (303)
112 KOG1516 Carboxylesterase and r 99.3 9.2E-12 2E-16 117.3 8.2 132 47-192 92-232 (545)
113 PRK05855 short chain dehydroge 99.3 6.9E-11 1.5E-15 112.3 14.1 85 68-171 25-114 (582)
114 PRK07868 acyl-CoA synthetase; 99.3 3.1E-10 6.6E-15 113.9 19.1 131 41-194 39-179 (994)
115 PF03403 PAF-AH_p_II: Platelet 99.2 1.2E-10 2.6E-15 103.7 13.4 191 66-313 98-358 (379)
116 PRK06765 homoserine O-acetyltr 99.2 2E-10 4.2E-15 102.9 14.8 67 238-312 318-387 (389)
117 KOG2382 Predicted alpha/beta h 99.2 3E-10 6.4E-15 96.1 14.7 221 52-314 38-314 (315)
118 cd00707 Pancreat_lipase_like P 99.2 1E-10 2.2E-15 100.1 11.2 108 66-193 34-148 (275)
119 COG0627 Predicted esterase [Ge 99.2 1E-10 2.2E-15 100.8 10.5 232 54-312 37-310 (316)
120 KOG4389 Acetylcholinesterase/B 99.2 1.5E-11 3.2E-16 108.0 4.9 129 49-193 118-256 (601)
121 COG2382 Fes Enterochelin ester 99.2 3.6E-10 7.8E-15 94.5 12.0 208 40-294 68-286 (299)
122 TIGR03230 lipo_lipase lipoprot 99.1 1.9E-09 4.2E-14 96.8 13.1 107 66-192 39-154 (442)
123 KOG3847 Phospholipase A2 (plat 99.1 2.2E-09 4.7E-14 89.5 12.4 193 65-313 115-371 (399)
124 PF06057 VirJ: Bacterial virul 99.1 1.6E-09 3.4E-14 85.2 10.6 185 70-312 4-191 (192)
125 PF06821 Ser_hydrolase: Serine 99.1 5.1E-09 1.1E-13 82.8 13.4 152 71-289 1-154 (171)
126 KOG2237 Predicted serine prote 99.1 2.6E-09 5.7E-14 97.0 13.0 241 40-312 440-704 (712)
127 PF03583 LIP: Secretory lipase 99.1 4.1E-09 8.8E-14 90.8 13.8 188 90-290 16-266 (290)
128 COG4188 Predicted dienelactone 99.0 1E-08 2.2E-13 88.4 12.9 118 41-171 38-179 (365)
129 PF03959 FSH1: Serine hydrolas 99.0 5.1E-09 1.1E-13 86.2 10.5 117 121-290 83-203 (212)
130 TIGR01839 PHA_synth_II poly(R) 98.9 1.4E-07 3E-12 86.6 17.0 133 41-195 191-331 (560)
131 COG0596 MhpC Predicted hydrola 98.8 7.3E-07 1.6E-11 74.6 19.5 100 68-192 21-123 (282)
132 TIGR03502 lipase_Pla1_cef extr 98.8 5.2E-08 1.1E-12 93.1 11.4 93 67-172 448-576 (792)
133 TIGR01849 PHB_depoly_PhaZ poly 98.7 9E-07 2E-11 78.9 17.2 136 42-196 77-212 (406)
134 PRK04940 hypothetical protein; 98.7 3.8E-07 8.2E-12 71.7 13.0 118 151-312 60-179 (180)
135 COG2936 Predicted acyl esteras 98.7 5.9E-07 1.3E-11 82.2 16.0 136 38-194 16-161 (563)
136 COG2819 Predicted hydrolase of 98.7 2.2E-06 4.8E-11 71.1 17.2 117 147-312 133-260 (264)
137 PF00151 Lipase: Lipase; Inte 98.6 7E-08 1.5E-12 84.4 7.1 111 65-193 68-188 (331)
138 PF12048 DUF3530: Protein of u 98.6 1.1E-05 2.5E-10 70.1 20.0 204 44-313 65-309 (310)
139 PF09752 DUF2048: Uncharacteri 98.6 5.6E-06 1.2E-10 71.5 17.7 104 51-174 76-198 (348)
140 COG4814 Uncharacterized protei 98.6 9.6E-06 2.1E-10 66.2 16.4 204 67-312 45-286 (288)
141 PF02273 Acyl_transf_2: Acyl t 98.5 8E-07 1.7E-11 72.1 9.8 211 43-290 6-239 (294)
142 PF06028 DUF915: Alpha/beta hy 98.5 1.6E-06 3.5E-11 72.8 11.5 155 120-312 85-254 (255)
143 KOG2624 Triglyceride lipase-ch 98.5 4.9E-06 1.1E-10 74.1 14.9 133 39-193 46-200 (403)
144 KOG2551 Phospholipase/carboxyh 98.5 3.9E-06 8.5E-11 67.2 12.3 109 153-311 106-218 (230)
145 PF06342 DUF1057: Alpha/beta h 98.5 6.7E-06 1.4E-10 68.6 13.8 124 42-191 7-136 (297)
146 PF07819 PGAP1: PGAP1-like pro 98.5 1.9E-06 4.2E-11 71.4 10.4 107 68-190 4-121 (225)
147 KOG3253 Predicted alpha/beta h 98.4 3.2E-06 6.9E-11 76.8 12.1 169 68-292 176-349 (784)
148 PF00975 Thioesterase: Thioest 98.4 1.7E-06 3.6E-11 72.2 9.5 100 70-191 2-103 (229)
149 PF00561 Abhydrolase_1: alpha/ 98.4 1E-06 2.3E-11 72.9 7.8 70 102-191 1-78 (230)
150 PF10142 PhoPQ_related: PhoPQ- 98.4 1.3E-05 2.8E-10 70.6 14.0 214 51-312 49-319 (367)
151 COG4757 Predicted alpha/beta h 98.3 5.3E-06 1.1E-10 66.8 10.1 190 89-310 46-280 (281)
152 COG3545 Predicted esterase of 98.3 5.4E-05 1.2E-09 58.6 14.7 97 150-288 58-156 (181)
153 PF10230 DUF2305: Uncharacteri 98.3 1.5E-05 3.2E-10 68.0 12.2 112 68-195 2-125 (266)
154 KOG4840 Predicted hydrolases o 98.3 1.9E-05 4.2E-10 63.1 11.5 107 69-195 37-147 (299)
155 COG4947 Uncharacterized protei 98.2 2.2E-06 4.7E-11 65.6 4.7 187 66-290 25-217 (227)
156 PF12146 Hydrolase_4: Putative 98.2 5.1E-06 1.1E-10 56.6 5.4 57 50-116 2-58 (79)
157 PF01674 Lipase_2: Lipase (cla 98.1 8E-06 1.7E-10 67.0 5.7 83 71-172 4-96 (219)
158 COG2021 MET2 Homoserine acetyl 98.0 0.00049 1.1E-08 59.8 16.0 64 239-312 302-367 (368)
159 COG3243 PhaC Poly(3-hydroxyalk 98.0 0.00013 2.8E-09 64.3 12.5 85 91-194 130-219 (445)
160 PF05990 DUF900: Alpha/beta hy 98.0 7.1E-05 1.5E-09 62.4 10.1 111 66-194 16-139 (233)
161 PF11144 DUF2920: Protein of u 98.0 0.002 4.3E-08 57.1 18.9 224 44-291 14-351 (403)
162 COG3150 Predicted esterase [Ge 97.9 6.3E-05 1.4E-09 57.6 8.3 129 151-312 59-188 (191)
163 PF05677 DUF818: Chlamydia CHL 97.9 0.00026 5.6E-09 60.9 12.0 96 66-171 135-235 (365)
164 PF07082 DUF1350: Protein of u 97.8 0.0016 3.5E-08 53.8 15.4 191 55-290 9-206 (250)
165 PF03096 Ndr: Ndr family; Int 97.8 0.00031 6.7E-09 59.4 11.5 219 51-314 10-280 (283)
166 PF05577 Peptidase_S28: Serine 97.8 0.00031 6.7E-09 64.5 11.5 121 53-193 15-149 (434)
167 PTZ00472 serine carboxypeptida 97.8 0.00058 1.2E-08 62.9 13.2 48 148-195 168-219 (462)
168 PLN02733 phosphatidylcholine-s 97.7 0.00014 3E-09 66.1 7.8 91 88-195 109-204 (440)
169 KOG2931 Differentiation-relate 97.6 0.0052 1.1E-07 51.8 15.4 224 50-314 32-307 (326)
170 PF05705 DUF829: Eukaryotic pr 97.6 0.00072 1.6E-08 56.8 10.6 59 246-310 180-240 (240)
171 COG4782 Uncharacterized protei 97.5 0.00069 1.5E-08 58.7 9.3 111 66-194 114-236 (377)
172 KOG3967 Uncharacterized conser 97.5 0.0011 2.4E-08 53.0 9.3 105 66-188 99-223 (297)
173 COG3319 Thioesterase domains o 97.5 0.001 2.2E-08 55.9 9.6 102 69-193 1-104 (257)
174 PF05057 DUF676: Putative seri 97.5 0.00062 1.3E-08 56.3 8.1 25 150-174 77-101 (217)
175 COG3946 VirJ Type IV secretory 97.4 0.00099 2.1E-08 58.4 9.2 73 88-173 274-348 (456)
176 TIGR03712 acc_sec_asp2 accesso 97.4 0.014 3.1E-07 52.7 15.6 107 67-198 288-396 (511)
177 COG1073 Hydrolases of the alph 97.3 0.0065 1.4E-07 52.2 13.5 62 246-313 234-297 (299)
178 KOG1553 Predicted alpha/beta h 97.3 0.0028 6.1E-08 54.4 10.2 100 66-193 241-346 (517)
179 KOG3975 Uncharacterized conser 97.3 0.013 2.8E-07 48.3 13.2 107 65-192 26-147 (301)
180 PF11339 DUF3141: Protein of u 97.2 0.07 1.5E-06 48.8 18.7 66 99-174 98-163 (581)
181 PF00450 Peptidase_S10: Serine 97.2 0.006 1.3E-07 55.6 12.2 133 43-194 15-183 (415)
182 PRK10252 entF enterobactin syn 97.2 0.002 4.4E-08 67.4 9.6 101 68-191 1068-1170(1296)
183 KOG3724 Negative regulator of 97.1 0.0018 4E-08 61.3 7.8 51 118-172 153-203 (973)
184 PF02450 LCAT: Lecithin:choles 97.0 0.0018 3.8E-08 58.5 7.0 91 89-195 67-163 (389)
185 PLN02209 serine carboxypeptida 97.0 0.015 3.2E-07 53.2 12.2 66 122-194 145-214 (437)
186 PLN03016 sinapoylglucose-malat 96.8 0.022 4.7E-07 52.1 12.0 48 148-195 162-213 (433)
187 COG1075 LipA Predicted acetylt 96.8 0.0044 9.6E-08 54.8 7.1 101 70-192 61-164 (336)
188 PF11187 DUF2974: Protein of u 96.7 0.0035 7.7E-08 51.8 5.7 53 124-189 68-120 (224)
189 PF11288 DUF3089: Protein of u 96.6 0.0083 1.8E-07 48.6 6.6 59 102-172 46-116 (207)
190 cd00741 Lipase Lipase. Lipase 96.5 0.013 2.8E-07 45.5 7.2 41 149-191 26-66 (153)
191 PF01764 Lipase_3: Lipase (cla 96.3 0.021 4.5E-07 43.4 7.3 26 150-175 63-88 (140)
192 KOG2183 Prolylcarboxypeptidase 96.1 0.012 2.6E-07 52.0 5.5 91 91-198 101-209 (492)
193 KOG1282 Serine carboxypeptidas 96.1 0.12 2.7E-06 47.1 12.1 50 147-196 164-217 (454)
194 PLN02606 palmitoyl-protein thi 96.1 0.076 1.7E-06 45.5 10.0 109 66-195 25-135 (306)
195 PLN02517 phosphatidylcholine-s 95.9 0.023 5.1E-07 52.9 6.7 92 89-194 158-265 (642)
196 PF01083 Cutinase: Cutinase; 95.9 0.047 1E-06 43.6 7.7 41 148-190 78-120 (179)
197 PLN02633 palmitoyl protein thi 95.8 0.12 2.6E-06 44.4 10.3 107 67-193 25-132 (314)
198 KOG2541 Palmitoyl protein thio 95.8 0.12 2.6E-06 43.2 9.8 102 68-190 24-126 (296)
199 smart00824 PKS_TE Thioesterase 95.8 0.12 2.6E-06 41.7 10.1 85 88-190 14-100 (212)
200 PF08386 Abhydrolase_4: TAP-li 95.8 0.037 8.1E-07 39.7 6.2 59 246-315 36-96 (103)
201 cd00519 Lipase_3 Lipase (class 95.7 0.036 7.8E-07 46.1 6.7 42 150-192 127-168 (229)
202 COG2939 Carboxypeptidase C (ca 95.5 0.26 5.6E-06 45.1 11.5 68 118-196 173-240 (498)
203 PLN02454 triacylglycerol lipas 95.0 0.082 1.8E-06 47.5 6.9 44 121-175 209-252 (414)
204 PF03283 PAE: Pectinacetyleste 94.8 0.042 9.2E-07 48.9 4.7 42 121-173 137-178 (361)
205 PF02089 Palm_thioest: Palmito 94.7 0.16 3.5E-06 43.2 7.6 38 151-193 80-117 (279)
206 KOG2182 Hydrolytic enzymes of 94.4 0.42 9E-06 43.6 9.8 117 56-191 75-206 (514)
207 PF07519 Tannase: Tannase and 94.4 0.3 6.5E-06 45.3 9.3 119 51-192 16-150 (474)
208 PLN02408 phospholipase A1 93.7 0.21 4.6E-06 44.2 6.6 24 151-174 200-223 (365)
209 PLN02571 triacylglycerol lipas 93.5 0.25 5.4E-06 44.5 6.6 23 152-174 227-249 (413)
210 PLN00413 triacylglycerol lipas 93.0 0.19 4.2E-06 45.7 5.3 23 150-172 283-305 (479)
211 PLN02802 triacylglycerol lipas 92.7 0.34 7.4E-06 44.6 6.5 25 151-175 330-354 (509)
212 PF00561 Abhydrolase_1: alpha/ 92.6 0.16 3.5E-06 41.5 4.1 49 238-291 170-218 (230)
213 KOG2369 Lecithin:cholesterol a 92.4 0.31 6.7E-06 44.2 5.7 72 89-174 126-205 (473)
214 PLN02324 triacylglycerol lipas 92.0 0.32 7E-06 43.7 5.3 41 122-173 197-237 (415)
215 PLN02934 triacylglycerol lipas 91.7 0.33 7.2E-06 44.7 5.1 22 151-172 321-342 (515)
216 KOG4569 Predicted lipase [Lipi 91.7 0.63 1.4E-05 41.2 6.8 43 122-177 155-197 (336)
217 PLN02162 triacylglycerol lipas 91.5 0.38 8.2E-06 43.8 5.2 22 150-171 277-298 (475)
218 PLN02719 triacylglycerol lipas 91.4 0.43 9.4E-06 43.9 5.5 24 151-174 298-321 (518)
219 PLN02310 triacylglycerol lipas 91.3 0.43 9.4E-06 42.9 5.4 23 151-173 209-231 (405)
220 PLN02753 triacylglycerol lipas 91.3 0.46 1E-05 43.9 5.6 25 150-174 311-335 (531)
221 PLN03037 lipase class 3 family 91.2 0.76 1.6E-05 42.5 6.9 24 151-174 318-341 (525)
222 PF08237 PE-PPE: PE-PPE domain 90.7 2.5 5.4E-05 35.1 9.1 26 149-174 46-71 (225)
223 COG3673 Uncharacterized conser 90.6 3 6.6E-05 36.1 9.4 39 121-171 104-142 (423)
224 PLN02761 lipase class 3 family 90.4 0.6 1.3E-05 43.1 5.6 47 121-174 271-317 (527)
225 PF07519 Tannase: Tannase and 89.9 0.96 2.1E-05 42.0 6.6 68 246-316 355-430 (474)
226 PLN02847 triacylglycerol lipas 88.5 0.85 1.9E-05 42.9 5.1 22 151-172 251-272 (633)
227 PF04083 Abhydro_lipase: Parti 88.1 1.9 4E-05 27.8 5.1 39 38-76 9-51 (63)
228 PLN02213 sinapoylglucose-malat 87.8 2.6 5.7E-05 37.0 7.6 48 148-195 48-99 (319)
229 COG4287 PqaA PhoPQ-activated p 87.2 14 0.0003 32.9 11.2 110 51-172 109-255 (507)
230 COG5153 CVT17 Putative lipase 86.7 1.5 3.2E-05 37.2 5.0 24 149-172 274-297 (425)
231 KOG4540 Putative lipase essent 86.7 1.5 3.2E-05 37.2 5.0 24 149-172 274-297 (425)
232 PF10605 3HBOH: 3HB-oligomer h 84.5 3.5 7.6E-05 38.9 6.7 69 246-314 557-638 (690)
233 KOG2565 Predicted hydrolases o 82.5 9.8 0.00021 33.9 8.3 91 66-175 151-253 (469)
234 PF06500 DUF1100: Alpha/beta h 81.1 1.2 2.7E-05 40.1 2.5 64 246-313 191-255 (411)
235 PF05277 DUF726: Protein of un 79.2 4.9 0.00011 35.6 5.6 43 149-192 218-260 (345)
236 PF10081 Abhydrolase_9: Alpha/ 78.5 9.3 0.0002 32.6 6.7 85 98-192 58-147 (289)
237 PF06259 Abhydrolase_8: Alpha/ 78.4 7.6 0.00016 30.9 5.9 38 149-192 107-145 (177)
238 KOG2521 Uncharacterized conser 77.9 51 0.0011 29.4 13.8 63 246-314 227-291 (350)
239 PF09994 DUF2235: Uncharacteri 77.8 3.9 8.6E-05 35.1 4.6 41 120-172 73-113 (277)
240 PF12242 Eno-Rase_NADH_b: NAD( 75.8 10 0.00023 25.3 5.0 42 121-172 20-61 (78)
241 PF06850 PHB_depo_C: PHB de-po 75.0 6.3 0.00014 31.7 4.6 69 241-313 131-202 (202)
242 PF10686 DUF2493: Protein of u 74.4 6.3 0.00014 26.0 3.8 34 67-107 30-63 (71)
243 PF05576 Peptidase_S37: PS-10 71.9 7.3 0.00016 35.1 4.7 94 66-187 61-164 (448)
244 KOG2029 Uncharacterized conser 65.9 18 0.00038 34.3 6.0 25 148-172 523-547 (697)
245 cd07224 Pat_like Patatin-like 60.8 13 0.00028 31.0 4.0 35 126-172 16-50 (233)
246 PF12146 Hydrolase_4: Putative 60.2 37 0.0008 22.8 5.5 61 246-311 18-79 (79)
247 KOG1202 Animal-type fatty acid 58.0 67 0.0014 33.7 8.6 97 66-190 2121-2217(2376)
248 KOG4372 Predicted alpha/beta h 55.7 22 0.00048 32.0 4.7 19 150-168 149-167 (405)
249 KOG1551 Uncharacterized conser 55.5 25 0.00054 29.9 4.6 25 148-172 192-216 (371)
250 KOG1283 Serine carboxypeptidas 55.0 1.2E+02 0.0027 26.7 8.7 130 45-191 9-165 (414)
251 PF04301 DUF452: Protein of un 54.3 17 0.00037 29.8 3.5 35 151-193 57-91 (213)
252 KOG0256 1-aminocyclopropane-1- 52.7 1.9E+02 0.004 26.5 11.2 41 147-195 143-183 (471)
253 TIGR00632 vsr DNA mismatch end 49.4 45 0.00098 24.4 4.7 41 67-107 55-113 (117)
254 COG4050 Uncharacterized protei 48.8 1E+02 0.0022 22.5 6.8 77 33-113 54-130 (152)
255 COG0431 Predicted flavoprotein 48.3 45 0.00097 26.6 5.1 64 89-171 58-121 (184)
256 PRK05077 frsA fermentation/res 45.9 1E+02 0.0022 28.3 7.6 64 246-313 195-259 (414)
257 cd07205 Pat_PNPLA6_PNPLA7_NTE1 45.9 32 0.00068 27.0 3.9 20 153-172 30-49 (175)
258 cd07230 Pat_TGL4-5_like Triacy 45.1 26 0.00055 32.2 3.6 24 148-173 100-123 (421)
259 cd07210 Pat_hypo_W_succinogene 44.0 35 0.00075 28.2 3.9 19 154-172 31-49 (221)
260 cd07207 Pat_ExoU_VipD_like Exo 43.7 34 0.00074 27.3 3.8 20 153-172 29-48 (194)
261 COG4635 HemG Flavodoxin [Energ 41.9 67 0.0014 25.0 4.7 66 246-313 2-73 (175)
262 cd07198 Patatin Patatin-like p 41.7 39 0.00084 26.4 3.8 22 152-173 27-48 (172)
263 PF05576 Peptidase_S37: PS-10 41.6 22 0.00048 32.2 2.5 59 246-310 353-411 (448)
264 COG4822 CbiK Cobalamin biosynt 40.9 56 0.0012 26.8 4.4 41 121-170 117-157 (265)
265 cd07222 Pat_PNPLA4 Patatin-lik 38.8 42 0.00091 28.2 3.7 17 154-170 34-50 (246)
266 COG3340 PepE Peptidase E [Amin 38.4 45 0.00098 27.3 3.6 40 68-110 32-71 (224)
267 cd07218 Pat_iPLA2 Calcium-inde 38.2 49 0.0011 27.8 4.0 18 155-172 34-51 (245)
268 KOG2853 Possible oxidoreductas 37.7 69 0.0015 28.5 4.8 63 71-139 89-165 (509)
269 TIGR02690 resist_ArsH arsenica 37.5 1.2E+02 0.0027 25.0 6.1 56 92-161 84-139 (219)
270 cd07204 Pat_PNPLA_like Patatin 37.1 51 0.0011 27.6 3.9 20 153-172 33-52 (243)
271 PRK10279 hypothetical protein; 36.7 49 0.0011 28.8 3.8 20 152-171 34-53 (300)
272 PF12122 DUF3582: Protein of u 36.4 93 0.002 22.1 4.6 50 260-313 12-61 (101)
273 COG0529 CysC Adenylylsulfate k 36.0 97 0.0021 24.8 4.9 39 66-108 20-58 (197)
274 KOG4287 Pectin acetylesterase 35.8 9.6 0.00021 33.5 -0.6 26 148-173 173-198 (402)
275 cd07212 Pat_PNPLA9 Patatin-lik 34.3 33 0.00071 30.1 2.4 18 154-171 35-52 (312)
276 TIGR02240 PHA_depoly_arom poly 33.4 2.1E+02 0.0045 24.0 7.3 62 246-313 27-88 (276)
277 cd01819 Patatin_and_cPLA2 Pata 31.7 81 0.0017 24.2 4.0 19 151-169 28-46 (155)
278 KOG2385 Uncharacterized conser 30.0 1.4E+02 0.003 28.2 5.5 67 115-190 419-485 (633)
279 TIGR01250 pro_imino_pep_2 prol 29.8 2E+02 0.0043 23.7 6.6 64 246-313 27-93 (288)
280 cd07229 Pat_TGL3_like Triacylg 29.4 65 0.0014 29.2 3.5 20 154-173 114-133 (391)
281 COG1225 Bcp Peroxiredoxin [Pos 28.9 1.4E+02 0.0031 23.2 4.8 39 68-107 31-70 (157)
282 PF14253 AbiH: Bacteriophage a 28.8 30 0.00065 29.3 1.3 20 148-167 232-251 (270)
283 cd07228 Pat_NTE_like_bacteria 28.8 49 0.0011 26.0 2.4 20 153-172 30-49 (175)
284 COG5045 Ribosomal protein S10E 28.2 84 0.0018 21.7 3.0 54 93-160 12-65 (105)
285 PF13207 AAA_17: AAA domain; P 28.1 79 0.0017 22.6 3.3 32 71-109 1-32 (121)
286 PF01734 Patatin: Patatin-like 27.6 47 0.001 25.8 2.2 22 151-172 27-48 (204)
287 smart00827 PKS_AT Acyl transfe 27.3 97 0.0021 26.6 4.2 20 151-170 82-101 (298)
288 PRK05282 (alpha)-aspartyl dipe 27.2 1.6E+02 0.0035 24.6 5.3 40 68-110 31-70 (233)
289 cd07211 Pat_PNPLA8 Patatin-lik 26.9 47 0.001 28.9 2.2 17 154-170 44-60 (308)
290 cd07227 Pat_Fungal_NTE1 Fungal 26.8 54 0.0012 28.0 2.5 19 153-171 40-58 (269)
291 cd07225 Pat_PNPLA6_PNPLA7 Pata 26.8 54 0.0012 28.7 2.5 19 153-171 45-63 (306)
292 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.7 1E+02 0.0023 26.8 4.2 19 154-172 100-118 (298)
293 cd07209 Pat_hypo_Ecoli_Z1214_l 26.2 58 0.0013 26.6 2.5 20 153-172 28-47 (215)
294 PF06309 Torsin: Torsin; Inte 25.8 1.3E+02 0.0029 22.4 4.0 13 66-78 50-62 (127)
295 cd07231 Pat_SDP1-like Sugar-De 25.7 91 0.002 27.4 3.6 19 154-172 99-117 (323)
296 PF00004 AAA: ATPase family as 25.7 1.5E+02 0.0032 21.3 4.5 55 72-133 1-55 (132)
297 PF04914 DltD_C: DltD C-termin 25.6 1.6E+02 0.0035 22.1 4.5 54 260-315 37-90 (130)
298 KOG2872 Uroporphyrinogen decar 25.5 1E+02 0.0022 26.6 3.7 34 67-113 251-284 (359)
299 PF10605 3HBOH: 3HB-oligomer h 25.4 6.4E+02 0.014 24.6 11.2 40 152-196 286-325 (690)
300 PF08484 Methyltransf_14: C-me 25.4 1.9E+02 0.0041 22.5 5.1 36 150-191 68-103 (160)
301 cd07208 Pat_hypo_Ecoli_yjju_li 25.3 64 0.0014 27.3 2.7 21 153-173 29-49 (266)
302 cd07220 Pat_PNPLA2 Patatin-lik 24.9 1E+02 0.0022 26.0 3.7 20 153-172 38-57 (249)
303 PF02273 Acyl_transf_2: Acyl t 24.8 4E+02 0.0086 22.7 6.9 66 246-315 31-100 (294)
304 cd04251 AAK_NAGK-UC AAK_NAGK-U 24.7 82 0.0018 26.7 3.2 26 71-108 27-52 (257)
305 PF01583 APS_kinase: Adenylyls 24.6 1.6E+02 0.0034 22.9 4.4 37 68-108 1-37 (156)
306 COG4425 Predicted membrane pro 24.6 1.7E+02 0.0036 27.1 5.0 60 97-167 345-413 (588)
307 COG1752 RssA Predicted esteras 24.4 97 0.0021 26.9 3.7 23 151-173 39-61 (306)
308 KOG4127 Renal dipeptidase [Pos 24.4 2.7E+02 0.0058 25.0 6.1 79 69-161 267-345 (419)
309 cd07217 Pat17_PNPLA8_PNPLA9_li 24.4 63 0.0014 28.8 2.5 18 154-171 44-61 (344)
310 cd07232 Pat_PLPL Patain-like p 24.4 85 0.0018 28.7 3.4 20 154-173 98-117 (407)
311 cd07213 Pat17_PNPLA8_PNPLA9_li 24.3 64 0.0014 27.8 2.5 20 153-172 36-55 (288)
312 PRK13703 conjugal pilus assemb 24.3 2.7E+02 0.0058 23.5 6.0 53 69-125 145-197 (248)
313 PF12697 Abhydrolase_6: Alpha/ 24.3 3.1E+02 0.0067 21.3 6.6 62 247-314 1-64 (228)
314 PLN02578 hydrolase 23.7 2.5E+02 0.0054 24.8 6.2 62 246-313 88-149 (354)
315 KOG1455 Lysophospholipase [Lip 23.2 3.2E+02 0.0069 23.9 6.3 64 246-312 56-119 (313)
316 PTZ00472 serine carboxypeptida 22.9 1.9E+02 0.0041 27.0 5.5 64 246-314 366-460 (462)
317 COG4822 CbiK Cobalamin biosynt 22.4 4.5E+02 0.0098 21.8 7.9 56 66-135 136-192 (265)
318 PF06342 DUF1057: Alpha/beta h 22.4 3.1E+02 0.0067 23.8 6.0 20 239-259 208-227 (297)
319 PF13728 TraF: F plasmid trans 22.1 3.4E+02 0.0075 22.2 6.3 52 67-123 121-172 (215)
320 PLN02607 1-aminocyclopropane-1 22.1 4.3E+02 0.0093 24.5 7.6 38 148-193 118-155 (447)
321 PF09885 DUF2112: Uncharacteri 21.8 3.6E+02 0.0077 20.3 6.0 79 31-113 48-126 (143)
322 PLN02213 sinapoylglucose-malat 21.7 3E+02 0.0065 24.1 6.2 62 246-313 235-317 (319)
323 PF00698 Acyl_transf_1: Acyl t 21.6 88 0.0019 27.3 2.9 52 247-312 158-209 (318)
324 TIGR03271 methan_mark_5 putati 21.6 3.6E+02 0.0077 20.3 6.3 78 32-113 48-125 (142)
325 cd07216 Pat17_PNPLA8_PNPLA9_li 21.3 62 0.0014 28.2 1.9 17 154-170 45-61 (309)
326 COG4553 DepA Poly-beta-hydroxy 21.3 5.6E+02 0.012 22.4 8.9 65 246-314 341-408 (415)
327 PF05577 Peptidase_S28: Serine 21.2 1.3E+02 0.0029 27.5 4.1 42 246-294 378-419 (434)
328 COG3007 Uncharacterized paraqu 21.1 2E+02 0.0043 25.0 4.6 43 122-173 22-64 (398)
329 PF10281 Ish1: Putative stress 21.0 74 0.0016 17.8 1.5 13 304-316 7-19 (38)
330 cd07049 BMC_EutL_repeat1 ethan 20.9 2.4E+02 0.0052 20.2 4.3 47 266-314 44-101 (103)
331 cd03013 PRX5_like Peroxiredoxi 20.8 2.8E+02 0.0062 21.2 5.3 39 68-107 30-71 (155)
332 cd07199 Pat17_PNPLA8_PNPLA9_li 20.6 71 0.0015 26.9 2.0 18 154-171 37-54 (258)
333 COG4553 DepA Poly-beta-hydroxy 20.1 1.6E+02 0.0035 25.6 3.9 112 66-195 101-212 (415)
334 TIGR03131 malonate_mdcH malona 20.1 1.5E+02 0.0033 25.4 4.0 20 151-170 76-95 (295)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=6.9e-41 Score=287.69 Aligned_cols=296 Identities=40% Similarity=0.671 Sum_probs=255.6
Q ss_pred cccccceeeccCceeecccC-ccCCCCCCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcc
Q 043192 7 NFAPFFIISQDGHVHRLVGE-EIIPASLDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAF 85 (316)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~ 85 (316)
...+.++...+|++.|.... ..++++.++..++...++.+....++..++|.|.........|+|||+|||||..|+..
T Consensus 28 ~~~~~i~i~~~~~~~r~~~~~~~~p~~~~p~~~v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~ 107 (336)
T KOG1515|consen 28 YLFENIRIFKDGSFERFFGRFDKVPPSSDPVNGVTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN 107 (336)
T ss_pred hhhhhceeecCCceeeeecccccCCCCCCcccCceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC
Confidence 34567899999999999885 88888888888999999999998899999999998754468999999999999999988
Q ss_pred hhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHH
Q 043192 86 SLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIA 165 (316)
Q Consensus 86 ~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 165 (316)
...++.++.+++.+.++.|+++|||++|++.+|...+|..+++.|+.++. |..-++|++||+|+|.|+||++|
T Consensus 108 ~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~-------~~~~~~D~~rv~l~GDSaGGNia 180 (336)
T KOG1515|consen 108 SPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNS-------WLKLGADPSRVFLAGDSAGGNIA 180 (336)
T ss_pred CchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhH-------HHHhCCCcccEEEEccCccHHHH
Confidence 77899999999999999999999999999999999999999999999862 33335999999999999999999
Q ss_pred HHHHHHhhcccccCCccceeEEecccccCCCCCCCCCC-----CCCcccccchhhhhhhCCCCC-CCCCCccCCCC-CC-
Q 043192 166 HHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPY-----VPEYWTTIIDEPWQIARPDTS-GLDDPIINPVA-DP- 237 (316)
Q Consensus 166 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~- 237 (316)
..++.+..+..+.+.+++|.|+++|++...+...++.. ............|+.+.++.. ...++.+.|.. ..
T Consensus 181 ~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~ 260 (336)
T KOG1515|consen 181 HVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLA 260 (336)
T ss_pred HHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccc
Confidence 99999887543336799999999999998877655322 222335566788888888887 78999998886 21
Q ss_pred ---cccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 238 ---KLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 238 ---~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
...++| |+|++.++.|.+.+++..++++|++.|+ +++++.++++.|+|..+.+..+.+.+.++.+.+|+.+.
T Consensus 261 ~d~~~~~lp--~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv--~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 261 KDLSGLGLP--PTLVVVAGYDVLRDEGLAYAEKLKKAGV--EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCccccCCC--ceEEEEeCchhhhhhhHHHHHHHHHcCC--eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 344556 8999999999999999999999999999 89999999999999999887889999999999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=6.6e-36 Score=261.12 Aligned_cols=256 Identities=18% Similarity=0.251 Sum_probs=205.5
Q ss_pred ceeeeEEecCC-CceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC
Q 043192 39 VDSKDIIYSSE-HNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV 117 (316)
Q Consensus 39 ~~~~~v~~~~~-~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~ 117 (316)
+..+++.++.. +.+.+++|.|... ..|+|||+|||||..|+.. .+..++..++.+.|+.|+++|||+++++.+
T Consensus 55 ~~~~~~~i~~~~g~i~~~~y~P~~~----~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~Vv~vdYrlape~~~ 128 (318)
T PRK10162 55 MATRAYMVPTPYGQVETRLYYPQPD----SQATLFYLHGGGFILGNLD--THDRIMRLLASYSGCTVIGIDYTLSPEARF 128 (318)
T ss_pred ceEEEEEEecCCCceEEEEECCCCC----CCCEEEEEeCCcccCCCch--hhhHHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 34667777653 3599999999632 4599999999999999876 466788889888899999999999999999
Q ss_pred CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCC
Q 043192 118 PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAP 197 (316)
Q Consensus 118 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (316)
+..++|+.++++|+.++...++ +|+++|+|+|+|+||++|+.++.+..+...++..++++++++|+++....
T Consensus 129 p~~~~D~~~a~~~l~~~~~~~~--------~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~ 200 (318)
T PRK10162 129 PQAIEEIVAVCCYFHQHAEDYG--------INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS 200 (318)
T ss_pred CCcHHHHHHHHHHHHHhHHHhC--------CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC
Confidence 9999999999999998876665 89999999999999999999998765543223579999999999875322
Q ss_pred CCCCC--CCC-CcccccchhhhhhhCCCCCCCCCCccCCCCCCcc-cCCCCCcEEEEEcCCccccchHHHHHHHHHhCCC
Q 043192 198 IPGEP--YVP-EYWTTIIDEPWQIARPDTSGLDDPIINPVADPKL-SSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGW 273 (316)
Q Consensus 198 ~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~ 273 (316)
..... ... .+....+..++..|.+......+++.++... ++ .++| |++|++|+.|++.++++.|+++|+++|+
T Consensus 201 ~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~-~l~~~lP--p~~i~~g~~D~L~de~~~~~~~L~~aGv 277 (318)
T PRK10162 201 VSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNN-DLTRDVP--PCFIAGAEFDPLLDDSRLLYQTLAAHQQ 277 (318)
T ss_pred hhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchh-hhhcCCC--CeEEEecCCCcCcChHHHHHHHHHHcCC
Confidence 11000 000 1223345556667776555556677777654 66 6788 9999999999999999999999999999
Q ss_pred CcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 274 KGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 274 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+++++.++|..|+|..+.+..+++++.++.+.+||+++
T Consensus 278 --~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 278 --PCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred --CEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999987777789999999999999875
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=1.3e-32 Score=240.72 Aligned_cols=248 Identities=28% Similarity=0.414 Sum_probs=202.1
Q ss_pred ecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHH
Q 043192 46 YSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSW 125 (316)
Q Consensus 46 ~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~ 125 (316)
...+..+++++|.| ......+.|+|||+|||||..|+.. .+...+..++...|+.|+++|||+.|++.||..++|+.
T Consensus 58 ~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~--~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~ 134 (312)
T COG0657 58 GPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLR--THDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAY 134 (312)
T ss_pred CCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChh--hhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHH
Confidence 34455688999999 3222467899999999999999987 45688899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC---
Q 043192 126 TALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP--- 202 (316)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~--- 202 (316)
+++.|+.++...+| +|+++|+|+|+|+||++|+.++....++. .+.+++.++++|+++......+..
T Consensus 135 ~a~~~l~~~~~~~g--------~dp~~i~v~GdSAGG~La~~~a~~~~~~~--~~~p~~~~li~P~~d~~~~~~~~~~~~ 204 (312)
T COG0657 135 AAYRWLRANAAELG--------IDPSRIAVAGDSAGGHLALALALAARDRG--LPLPAAQVLISPLLDLTSSAASLPGYG 204 (312)
T ss_pred HHHHHHHhhhHhhC--------CCccceEEEecCcccHHHHHHHHHHHhcC--CCCceEEEEEecccCCcccccchhhcC
Confidence 99999999987775 99999999999999999999999876543 356899999999998775111111
Q ss_pred CCCCcccccch-hhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEE
Q 043192 203 YVPEYWTTIID-EPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSE 281 (316)
Q Consensus 203 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~ 281 (316)
....+...... .+...+........++..+|+....+.++| |++|++|+.|.+.+++..|.++|+++|+ .+++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lP--P~~i~~a~~D~l~~~~~~~a~~L~~agv--~~~~~~ 280 (312)
T COG0657 205 EADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSGLP--PTLIQTAEFDPLRDEGEAYAERLRAAGV--PVELRV 280 (312)
T ss_pred CccccCHHHHHHHHHHHhCcCccccCCCccCccccccccCCC--CEEEEecCCCcchhHHHHHHHHHHHcCC--eEEEEE
Confidence 11112222222 556666666556666788998885567788 9999999999999999999999999999 899999
Q ss_pred eCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 282 IMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 282 ~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++++.|+|..... +++.+.+..+.+|+++
T Consensus 281 ~~g~~H~f~~~~~--~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 281 YPGMIHGFDLLTG--PEARSALRQIAAFLRA 309 (312)
T ss_pred eCCcceeccccCc--HHHHHHHHHHHHHHHH
Confidence 9999999976544 7777888999999873
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.98 E-value=2.6e-32 Score=225.62 Aligned_cols=203 Identities=32% Similarity=0.492 Sum_probs=160.3
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCC
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADF 150 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 150 (316)
|||+|||||..|+.. ....++..++++.|+.|+++|||++|+..++..++|+.++++|+.++...++ +|+
T Consensus 1 v~~~HGGg~~~g~~~--~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~--------~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE--SHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLG--------IDP 70 (211)
T ss_dssp EEEE--STTTSCGTT--THHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHT--------EEE
T ss_pred CEEECCcccccCChH--HHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccc--------ccc
Confidence 799999999999987 4578889999878999999999999999999999999999999999865553 899
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC-CCCCCCC------CCCCCcccccchhhhhhhCCCC
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG-SAPIPGE------PYVPEYWTTIIDEPWQIARPDT 223 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 223 (316)
++|+|+|+|+||++|+.++.+..+.. ...++++++++|+.+. .....+. .....+.......++..+.+ .
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 147 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-G 147 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-T
T ss_pred cceEEeecccccchhhhhhhhhhhhc--ccchhhhhcccccccchhcccccccccccccccccccccccccccccccc-c
Confidence 99999999999999999998876653 2469999999998876 1111111 11122223445566676665 4
Q ss_pred CCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 224 SGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
....++.++|+...+++++| |++|++|+.|.+++++..|+++|++.|+ ++++++++|..|+|.
T Consensus 148 ~~~~~~~~sp~~~~~~~~~P--p~~i~~g~~D~l~~~~~~~~~~L~~~gv--~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 148 SDRDDPLASPLNASDLKGLP--PTLIIHGEDDVLVDDSLRFAEKLKKAGV--DVELHVYPGMPHGFF 210 (211)
T ss_dssp GGTTSTTTSGGGSSCCTTCH--EEEEEEETTSTTHHHHHHHHHHHHHTT---EEEEEEETTEETTGG
T ss_pred ccccccccccccccccccCC--CeeeeccccccchHHHHHHHHHHHHCCC--CEEEEEECCCeEEee
Confidence 45567788888754566778 9999999999999999999999999999 999999999999886
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=9.8e-26 Score=213.03 Aligned_cols=241 Identities=16% Similarity=0.171 Sum_probs=174.8
Q ss_pred CCCceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC
Q 043192 36 TTHVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP 113 (316)
Q Consensus 36 ~~~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~ 113 (316)
......+.++|++ +..+.+.+++|.+..+.+++|+||++|||....-. . .+....+.++.+ ||+|+.++||++.
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~-~--~~~~~~q~~~~~-G~~V~~~n~RGS~ 435 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG-Y--SFNPEIQVLASA-GYAVLAPNYRGST 435 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc-c--ccchhhHHHhcC-CeEEEEeCCCCCC
Confidence 3455667788877 44789999999998766678999999999753322 1 344555556555 9999999999886
Q ss_pred CC-----------CCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCcc
Q 043192 114 ED-----------PVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINI 182 (316)
Q Consensus 114 ~~-----------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~ 182 (316)
+. ......+|+.++++|+.+.. .+|++|++|+|+|+||.|++..+.+.+ .+
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~-----------~~d~~ri~i~G~SyGGymtl~~~~~~~-------~f 497 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLP-----------LVDPERIGITGGSYGGYMTLLAATKTP-------RF 497 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCC-----------CcChHHeEEeccChHHHHHHHHHhcCc-------hh
Confidence 52 23456899999999998776 699999999999999999999999863 47
Q ss_pred ceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCC--CCCCCCccCCCCCCcccCCCCCcEEEEEcCCcccc--
Q 043192 183 DGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDT--SGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLR-- 258 (316)
Q Consensus 183 ~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~-- 258 (316)
++.+...+.++-.......... ....+....... ........||+. ...++++ |+||+||++|..+
T Consensus 498 ~a~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~sp~~--~~~~i~~-P~LliHG~~D~~v~~ 567 (620)
T COG1506 498 KAAVAVAGGVDWLLYFGESTEG-------LRFDPEENGGGPPEDREKYEDRSPIF--YADNIKT-PLLLIHGEEDDRVPI 567 (620)
T ss_pred heEEeccCcchhhhhccccchh-------hcCCHHHhCCCcccChHHHHhcChhh--hhcccCC-CEEEEeecCCccCCh
Confidence 8888777755433222111110 000011111100 011122345655 5667777 9999999999866
Q ss_pred chHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 259 GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 259 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
+++..|+++|+..|+ +++++++|+++|++.. .+...+.++++.+|+++|.
T Consensus 568 ~q~~~~~~aL~~~g~--~~~~~~~p~e~H~~~~----~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 568 EQAEQLVDALKRKGK--PVELVVFPDEGHGFSR----PENRVKVLKEILDWFKRHL 617 (620)
T ss_pred HHHHHHHHHHHHcCc--eEEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHHh
Confidence 599999999999999 9999999999998883 3667889999999998864
No 6
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.89 E-value=8.6e-21 Score=162.83 Aligned_cols=228 Identities=11% Similarity=0.064 Sum_probs=142.7
Q ss_pred eeeEEecC---CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecC--CCCCCC
Q 043192 41 SKDIIYSS---EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDY--RRAPED 115 (316)
Q Consensus 41 ~~~v~~~~---~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~--r~~~~~ 115 (316)
.+.+++.+ +....+.+|+|++.. .++.|+|+++||.+ ++.........+..++.+.|+.|++||+ |+.+..
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIA 88 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCC
Confidence 34444444 346779999998753 34689999999965 3332212223345777778999999997 332110
Q ss_pred ------------C-CC-----------cchhhHHHHHHH-HHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHH
Q 043192 116 ------------P-VP-----------AAHEDSWTALKW-VASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 116 ------------~-~~-----------~~~~d~~~~~~~-l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 170 (316)
. +. .....+...+.. +.+. + .++.++++|+||||||.+|+.++.
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~--------~~~~~~~~~~G~S~GG~~a~~~a~ 157 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQ---F--------PLDGERQGITGHSMGGHGALVIAL 157 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhh---C--------CCCCCceEEEEEChhHHHHHHHHH
Confidence 0 00 001122222222 2222 1 277889999999999999999999
Q ss_pred HhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCC-cccCCCCCcEEE
Q 043192 171 RQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADP-KLSSLGCNRLLV 249 (316)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~li 249 (316)
++++ .++++++++|+.+.... . ........+....... ....++.... +....+ |+++
T Consensus 158 ~~p~------~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~--plli 216 (275)
T TIGR02821 158 KNPD------RFKSVSAFAPIVAPSRC--P----------WGQKAFSAYLGADEAA-WRSYDASLLVADGGRHS--TILI 216 (275)
T ss_pred hCcc------cceEEEEECCccCcccC--c----------chHHHHHHHhcccccc-hhhcchHHHHhhcccCC--CeeE
Confidence 8754 58999999999764211 0 0011222222221110 0011111110 222223 9999
Q ss_pred EEcCCccccch---HHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 250 FVAQLDLLRGR---GLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 250 ~~G~~D~~~~~---~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.||+.|.+++. ...+.++|+++|+ ++++..+||++|+|..+ ..++.+.++|..++
T Consensus 217 ~~G~~D~~v~~~~~~~~~~~~l~~~g~--~v~~~~~~g~~H~f~~~-------~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 217 DQGTADQFLDEQLRPDAFEQACRAAGQ--ALTLRRQAGYDHSYYFI-------ASFIADHLRHHAER 274 (275)
T ss_pred eecCCCcccCccccHHHHHHHHHHcCC--CeEEEEeCCCCccchhH-------HHhHHHHHHHHHhh
Confidence 99999998864 5789999999999 89999999999999865 46677777777664
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.89 E-value=1.3e-22 Score=167.87 Aligned_cols=188 Identities=14% Similarity=0.112 Sum_probs=130.9
Q ss_pred HHHHHHHhcCcEEEeecCCCCCCCC-----------CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeech
Q 043192 92 YMNTLVSHAKIIAVSVDYRRAPEDP-----------VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSA 160 (316)
Q Consensus 92 ~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 160 (316)
+...++.+.||+|+.+|||++++.. ....++|+.++++++.++. .+|++||+|+|+|+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-----------~iD~~ri~i~G~S~ 73 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-----------YIDPDRIGIMGHSY 73 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-----------SEEEEEEEEEEETH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-----------cccceeEEEEcccc
Confidence 3445666679999999999986421 1234789999999998876 49999999999999
Q ss_pred HHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCC--CCccCCCCCCc
Q 043192 161 GGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLD--DPIINPVADPK 238 (316)
Q Consensus 161 GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 238 (316)
||++++.++.+.+ ..++++++.+|+++.......... ....+....+...... ....++.. .
T Consensus 74 GG~~a~~~~~~~~------~~f~a~v~~~g~~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~s~~~--~ 137 (213)
T PF00326_consen 74 GGYLALLAATQHP------DRFKAAVAGAGVSDLFSYYGTTDI--------YTKAEYLEYGDPWDNPEFYRELSPIS--P 137 (213)
T ss_dssp HHHHHHHHHHHTC------CGSSEEEEESE-SSTTCSBHHTCC--------HHHGHHHHHSSTTTSHHHHHHHHHGG--G
T ss_pred cccccchhhcccc------eeeeeeeccceecchhcccccccc--------cccccccccCccchhhhhhhhhcccc--c
Confidence 9999999999764 469999999998876543322110 1110111111110110 01123333 2
Q ss_pred ccC--CCCCcEEEEEcCCcccc--chHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 239 LSS--LGCNRLLVFVAQLDLLR--GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 239 ~~~--~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+.+ ..+ |+||+||++|..+ .++.+++++|++.|+ +++++++|+++|++. ..+...++.+++.+||+++
T Consensus 138 ~~~~~~~~-P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~--~~~~~~~p~~gH~~~----~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 138 ADNVQIKP-PVLIIHGENDPRVPPSQSLRLYNALRKAGK--PVELLIFPGEGHGFG----NPENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGGCGGGS-EEEEEEETTBSSSTTHHHHHHHHHHHHTTS--SEEEEEETT-SSSTT----SHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCC-CEEEEccCCCCccCHHHHHHHHHHHHhcCC--CEEEEEcCcCCCCCC----CchhHHHHHHHHHHHHHHH
Confidence 333 444 9999999999987 589999999999999 899999999999776 3355668999999999875
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=4.2e-21 Score=158.63 Aligned_cols=234 Identities=16% Similarity=0.179 Sum_probs=153.5
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC--------CCcc
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP--------VPAA 120 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------~~~~ 120 (316)
+..+....|.|.+. ..++..|+++||.|.. .+..+..++.+++.. ||.|+.+||++++.+. +...
T Consensus 37 G~~lft~~W~p~~~--~~pr~lv~~~HG~g~~----~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~~ 109 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSG--TEPRGLVFLCHGYGEH----SSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDLV 109 (313)
T ss_pred CCEeEEEecccCCC--CCCceEEEEEcCCccc----chhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHHH
Confidence 55788899999765 2677899999996632 112456677777655 9999999999886543 3444
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCC
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPG 200 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 200 (316)
++|+.+-++.++.+.+ ...-..+|+||||||.+++.++.+.+ ...+|+|+++|.....+...-
T Consensus 110 v~D~~~~~~~i~~~~e-----------~~~lp~FL~GeSMGGAV~Ll~~~k~p------~~w~G~ilvaPmc~i~~~~kp 172 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREE-----------NKGLPRFLFGESMGGAVALLIALKDP------NFWDGAILVAPMCKISEDTKP 172 (313)
T ss_pred HHHHHHHHHHHhhccc-----------cCCCCeeeeecCcchHHHHHHHhhCC------cccccceeeecccccCCccCC
Confidence 6777777776665543 22357999999999999999999854 458999999998755443211
Q ss_pred CCCCCCcc--cccchhhhhhhCCCC--------------CCCCCCccCCCCC----------------CcccCCCCCcEE
Q 043192 201 EPYVPEYW--TTIIDEPWQIARPDT--------------SGLDDPIINPVAD----------------PKLSSLGCNRLL 248 (316)
Q Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~----------------~~~~~~~~~P~l 248 (316)
......+. -..+...|+ ..+.. ....++.+..... ..+.++.. |++
T Consensus 173 ~p~v~~~l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv-Pfl 250 (313)
T KOG1455|consen 173 HPPVISILTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV-PFL 250 (313)
T ss_pred CcHHHHHHHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc-cEE
Confidence 10000000 000000111 00000 0011111111110 14455666 999
Q ss_pred EEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 249 VFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 249 i~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|+||++|.+.+ .++++++...+. +.++.+|||+-|......+ .++.+.++.+|++||+++
T Consensus 251 ilHG~dD~VTDp~~Sk~Lye~A~S~----DKTlKlYpGm~H~Ll~gE~-~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 251 ILHGTDDKVTDPKVSKELYEKASSS----DKTLKLYPGMWHSLLSGEP-DENVEIVFGDIISWLDER 312 (313)
T ss_pred EEecCCCcccCcHHHHHHHHhccCC----CCceeccccHHHHhhcCCC-chhHHHHHHHHHHHHHhc
Confidence 99999999986 568888877654 7799999999998775333 378899999999999986
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=1.9e-20 Score=165.29 Aligned_cols=242 Identities=16% Similarity=0.181 Sum_probs=147.3
Q ss_pred CceeeeEEec--CCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC
Q 043192 38 HVDSKDIIYS--SEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED 115 (316)
Q Consensus 38 ~~~~~~v~~~--~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~ 115 (316)
++..++..+. ++..+.+..|.|.+. ..++++||++||.+. +.. ..+..++..++. .||.|+++|+|+++.+
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~---~~~-~~~~~~~~~L~~-~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGN---DIS-WTFQSTAIFLAQ-MGFACFALDLEGHGRS 101 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCC---Ccc-eehhHHHHHHHh-CCCEEEEecCCCCCCC
Confidence 3444444444 345677778888643 235789999999642 221 123344445544 5999999999988754
Q ss_pred CC--------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEE
Q 043192 116 PV--------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICL 187 (316)
Q Consensus 116 ~~--------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 187 (316)
.. ....+|+..+++++..... .+..+++|+||||||.+|+.++.+++ ..++++|+
T Consensus 102 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-----------~~~~~i~l~GhSmGG~ia~~~a~~~p------~~v~~lvl 164 (330)
T PLN02298 102 EGLRAYVPNVDLVVEDCLSFFNSVKQREE-----------FQGLPRFLYGESMGGAICLLIHLANP------EGFDGAVL 164 (330)
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHhccc-----------CCCCCEEEEEecchhHHHHHHHhcCc------ccceeEEE
Confidence 31 2235778888888876421 33457999999999999999988764 46999999
Q ss_pred ecccccCCCCCCCCCCCCCcccccchhhhhhhCCCC-----CC---------------CCCCc-cC--CC----------
Q 043192 188 LFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDT-----SG---------------LDDPI-IN--PV---------- 234 (316)
Q Consensus 188 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~-~~--~~---------- 234 (316)
++|+.......... ... .. .......+.+.. .. ..++. .. +.
T Consensus 165 ~~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T PLN02298 165 VAPMCKISDKIRPP---WPI-PQ-ILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV 239 (330)
T ss_pred ecccccCCcccCCc---hHH-HH-HHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH
Confidence 99976433211000 000 00 000000000000 00 00000 00 00
Q ss_pred ---CCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHH
Q 043192 235 ---ADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDF 309 (316)
Q Consensus 235 ---~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~f 309 (316)
....+.++.+ |+||+||++|.+++ .++++++.+... +.+++++++++|......| ....+++.+.+.+|
T Consensus 240 ~~~~~~~l~~i~~-PvLii~G~~D~ivp~~~~~~l~~~i~~~----~~~l~~~~~a~H~~~~e~p-d~~~~~~~~~i~~f 313 (330)
T PLN02298 240 TDYLGKKLKDVSI-PFIVLHGSADVVTDPDVSRALYEEAKSE----DKTIKIYDGMMHSLLFGEP-DENIEIVRRDILSW 313 (330)
T ss_pred HHHHHHhhhhcCC-CEEEEecCCCCCCCHHHHHHHHHHhccC----CceEEEcCCcEeeeecCCC-HHHHHHHHHHHHHH
Confidence 0013556777 99999999999885 567777766532 5699999999997764333 13356788999999
Q ss_pred HhcCC
Q 043192 310 IHGKD 314 (316)
Q Consensus 310 l~~~~ 314 (316)
|.++.
T Consensus 314 l~~~~ 318 (330)
T PLN02298 314 LNERC 318 (330)
T ss_pred HHHhc
Confidence 98764
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=1.6e-20 Score=166.83 Aligned_cols=234 Identities=15% Similarity=0.168 Sum_probs=138.7
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC--------cc
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP--------AA 120 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~ 120 (316)
+..+.+..|.|.+. .++|+|||+||.+. +.. ..+..++..++. .||.|+++|+|+++.+..+ ..
T Consensus 71 g~~l~~~~~~p~~~---~~~~~iv~lHG~~~---~~~-~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 71 GVEIFSKSWLPENS---RPKAAVCFCHGYGD---TCT-FFFEGIARKIAS-SGYGVFAMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred CCEEEEEEEecCCC---CCCeEEEEECCCCC---ccc-hHHHHHHHHHHh-CCCEEEEecCCCCCCCCCCCCCcCCHHHH
Confidence 44677778888643 46789999999553 221 123455566654 4999999999988654322 22
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCC
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPG 200 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 200 (316)
++|+...++.+.... ..+..+++|+||||||.+|+.++.++++ .++++|+++|+.........
T Consensus 143 ~~dv~~~l~~l~~~~-----------~~~~~~~~LvGhSmGG~val~~a~~~p~------~v~glVLi~p~~~~~~~~~~ 205 (349)
T PLN02385 143 VDDVIEHYSKIKGNP-----------EFRGLPSFLFGQSMGGAVALKVHLKQPN------AWDGAILVAPMCKIADDVVP 205 (349)
T ss_pred HHHHHHHHHHHHhcc-----------ccCCCCEEEEEeccchHHHHHHHHhCcc------hhhheeEecccccccccccC
Confidence 445555555554321 1334589999999999999999988744 69999999987643221100
Q ss_pred CCC-------------------CCCcccccchhh----hhhhCCCCCCCCCCcc-------C--CCCCCcccCCCCCcEE
Q 043192 201 EPY-------------------VPEYWTTIIDEP----WQIARPDTSGLDDPII-------N--PVADPKLSSLGCNRLL 248 (316)
Q Consensus 201 ~~~-------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~P~l 248 (316)
... ...+........ ...+..... ...... . ......+.++.+ |+|
T Consensus 206 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~i~~-P~L 283 (349)
T PLN02385 206 PPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAY-KDKPRLRTAVELLRTTQEIEMQLEEVSL-PLL 283 (349)
T ss_pred chHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCccee-CCCcchHHHHHHHHHHHHHHHhcccCCC-CEE
Confidence 000 000000000000 000000000 000000 0 000014556777 999
Q ss_pred EEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 249 VFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 249 i~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
|+||++|.+++ .++.+++.+... +.+++++++++|......|. +..+++++.+++||+++.
T Consensus 284 ii~G~~D~vv~~~~~~~l~~~~~~~----~~~l~~i~~~gH~l~~e~p~-~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 284 ILHGEADKVTDPSVSKFLYEKASSS----DKKLKLYEDAYHSILEGEPD-EMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEeCCCCccChHHHHHHHHHcCCC----CceEEEeCCCeeecccCCCh-hhHHHHHHHHHHHHHHhc
Confidence 99999999885 456666665422 57999999999976643331 225669999999999875
No 11
>PRK10566 esterase; Provisional
Probab=99.87 E-value=2.6e-20 Score=157.86 Aligned_cols=217 Identities=18% Similarity=0.189 Sum_probs=132.3
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-------CC-----
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-------VP----- 118 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~----- 118 (316)
++....|.|.+.. +++.|+||++||.+ ++.. .+..+...+ .+.||.|+++|+|+++... ..
T Consensus 11 ~~~~~~~~p~~~~-~~~~p~vv~~HG~~---~~~~--~~~~~~~~l-~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~ 83 (249)
T PRK10566 11 GIEVLHAFPAGQR-DTPLPTVFFYHGFT---SSKL--VYSYFAVAL-AQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI 83 (249)
T ss_pred CcceEEEcCCCCC-CCCCCEEEEeCCCC---cccc--hHHHHHHHH-HhCCCEEEEecCCcccccCCCccccchhhHHHH
Confidence 5556667786431 34679999999954 3332 344455555 4459999999999864321 00
Q ss_pred --cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEec--ccccC
Q 043192 119 --AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLF--PYFWG 194 (316)
Q Consensus 119 --~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~--p~~~~ 194 (316)
...+|+..+++++.+.. .++.++|+++||||||.+++.++.+.+. +++.+.+. +++..
T Consensus 84 ~~~~~~~~~~~~~~l~~~~-----------~~~~~~i~v~G~S~Gg~~al~~~~~~~~-------~~~~~~~~~~~~~~~ 145 (249)
T PRK10566 84 LLQNMQEFPTLRAAIREEG-----------WLLDDRLAVGGASMGGMTALGIMARHPW-------VKCVASLMGSGYFTS 145 (249)
T ss_pred HHHHHHHHHHHHHHHHhcC-----------CcCccceeEEeecccHHHHHHHHHhCCC-------eeEEEEeeCcHHHHH
Confidence 12456667777877653 3788999999999999999999887532 44444332 22210
Q ss_pred CC--CCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCC-CCCcEEEEEcCCccccc--hHHHHHHHHH
Q 043192 195 SA--PIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSL-GCNRLLVFVAQLDLLRG--RGLYYVTKLK 269 (316)
Q Consensus 195 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li~~G~~D~~~~--~~~~~~~~l~ 269 (316)
.. ......... ..........+.. .. ..++.. .+.++ ++ |+|++||++|.+++ +++++.+++.
T Consensus 146 ~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~----~~~~~~--~~~~i~~~-P~Lii~G~~D~~v~~~~~~~l~~~l~ 213 (249)
T PRK10566 146 LARTLFPPLIPET---AAQQAEFNNIVAP--LA----EWEVTH--QLEQLADR-PLLLWHGLADDVVPAAESLRLQQALR 213 (249)
T ss_pred HHHHhcccccccc---cccHHHHHHHHHH--Hh----hcChhh--hhhhcCCC-CEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 00 000000000 0000000000000 00 001111 33444 34 99999999999885 7889999999
Q ss_pred hCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 270 ESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 270 ~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.+|...+++++.|++++|.+. .+.++++++||+++
T Consensus 214 ~~g~~~~~~~~~~~~~~H~~~---------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 214 ERGLDKNLTCLWEPGVRHRIT---------PEALDAGVAFFRQH 248 (249)
T ss_pred hcCCCcceEEEecCCCCCccC---------HHHHHHHHHHHHhh
Confidence 988633478999999999764 35789999999875
No 12
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=2.3e-20 Score=158.38 Aligned_cols=208 Identities=12% Similarity=0.100 Sum_probs=131.1
Q ss_pred EEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC-CCCC------
Q 043192 44 IIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA-PEDP------ 116 (316)
Q Consensus 44 v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-~~~~------ 116 (316)
+...++..+.+++..|++. ...+.++||+.||-+ +... .+..++..|+ +.||.|+.+|+|++ +++.
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~---~~~~--~~~~~A~~La-~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 14 ICLENGQSIRVWETLPKEN-SPKKNNTILIASGFA---RRMD--HFAGLAEYLS-SNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred EEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCC---CChH--HHHHHHHHHH-HCCCEEEEecCCCCCCCCCCccccC
Confidence 3344455667777777643 245778999999933 3322 3556665555 55999999998865 4321
Q ss_pred -CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 117 -VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 117 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
......|+.++++|+++.. .++|+|+||||||.+|+..|.. ..++++|+.||+.+..
T Consensus 87 t~s~g~~Dl~aaid~lk~~~--------------~~~I~LiG~SmGgava~~~A~~--------~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG--------------INNLGLIAASLSARIAYEVINE--------IDLSFLITAVGVVNLR 144 (307)
T ss_pred cccccHHHHHHHHHHHHhcC--------------CCceEEEEECHHHHHHHHHhcC--------CCCCEEEEcCCcccHH
Confidence 3345789999999998752 3689999999999998666653 1389999999998744
Q ss_pred CCCCCCCCC-----CCc-ccc--------c-chhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc-
Q 043192 196 APIPGEPYV-----PEY-WTT--------I-IDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG- 259 (316)
Q Consensus 196 ~~~~~~~~~-----~~~-~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~- 259 (316)
+........ +.. ... . ...+...... ...+...++.. ..+++.. |+|++||++|.+++
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~---~~~~~~~s~i~--~~~~l~~-PvLiIHG~~D~lVp~ 218 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFK---HGWDTLDSTIN--KMKGLDI-PFIAFTANNDSWVKQ 218 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHh---cCccccccHHH--HHhhcCC-CEEEEEcCCCCccCH
Confidence 222110000 000 000 0 0111111000 00011223332 3555665 99999999999885
Q ss_pred -hHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 260 -RGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 260 -~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
.+++++++++. + +++++.+||+.|.+.
T Consensus 219 ~~s~~l~e~~~s-~---~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 219 SEVIDLLDSIRS-E---QCKLYSLIGSSHDLG 246 (307)
T ss_pred HHHHHHHHHhcc-C---CcEEEEeCCCccccC
Confidence 66788887654 2 789999999999887
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.86 E-value=5.1e-20 Score=158.45 Aligned_cols=229 Identities=14% Similarity=0.118 Sum_probs=139.1
Q ss_pred CCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC--------c
Q 043192 48 SEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP--------A 119 (316)
Q Consensus 48 ~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~ 119 (316)
++..+.+++|.|.+ .++++|+++||.+. +.. .|..++..++. .||.|+++|+|+++.+... .
T Consensus 9 ~g~~l~~~~~~~~~----~~~~~v~llHG~~~---~~~--~~~~~~~~l~~-~g~~via~D~~G~G~S~~~~~~~~~~~~ 78 (276)
T PHA02857 9 DNDYIYCKYWKPIT----YPKALVFISHGAGE---HSG--RYEELAENISS-LGILVFSHDHIGHGRSNGEKMMIDDFGV 78 (276)
T ss_pred CCCEEEEEeccCCC----CCCEEEEEeCCCcc---ccc--hHHHHHHHHHh-CCCEEEEccCCCCCCCCCccCCcCCHHH
Confidence 45578889998852 35688999999542 222 45566666654 5999999999988754321 1
Q ss_pred chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC
Q 043192 120 AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP 199 (316)
Q Consensus 120 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 199 (316)
.++|+...+.++++. ....+++|+||||||.+|+.++.+.+ ..++++|+++|.........
T Consensus 79 ~~~d~~~~l~~~~~~-------------~~~~~~~lvG~S~GG~ia~~~a~~~p------~~i~~lil~~p~~~~~~~~~ 139 (276)
T PHA02857 79 YVRDVVQHVVTIKST-------------YPGVPVFLLGHSMGATISILAAYKNP------NLFTAMILMSPLVNAEAVPR 139 (276)
T ss_pred HHHHHHHHHHHHHhh-------------CCCCCEEEEEcCchHHHHHHHHHhCc------cccceEEEeccccccccccH
Confidence 234555555555443 23367999999999999999998764 35899999999764221000
Q ss_pred CC---------CCCCCc--------ccccchhhhhhhCCCCC-CC-CCC-cc------CCCCCCcccCCCCCcEEEEEcC
Q 043192 200 GE---------PYVPEY--------WTTIIDEPWQIARPDTS-GL-DDP-II------NPVADPKLSSLGCNRLLVFVAQ 253 (316)
Q Consensus 200 ~~---------~~~~~~--------~~~~~~~~~~~~~~~~~-~~-~~~-~~------~~~~~~~~~~~~~~P~li~~G~ 253 (316)
.. ...... ................. .. ... .. .......+.++.+ |+|+++|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvliv~G~ 218 (276)
T PHA02857 140 LNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKT-PILILQGT 218 (276)
T ss_pred HHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCC-CEEEEecC
Confidence 00 000000 00000000000000000 00 000 00 0000014567778 99999999
Q ss_pred Cccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 254 LDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 254 ~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+|.+++ .+..+.+.+.. ++++.++++++|...... .+..+++++++.+||..+
T Consensus 219 ~D~i~~~~~~~~l~~~~~~-----~~~~~~~~~~gH~~~~e~--~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 219 NNEISDVSGAYYFMQHANC-----NREIKIYEGAKHHLHKET--DEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCcCChHHHHHHHHHccC-----CceEEEeCCCcccccCCc--hhHHHHHHHHHHHHHHHh
Confidence 999885 45555555432 579999999999777432 255789999999999875
No 14
>PRK10115 protease 2; Provisional
Probab=99.86 E-value=9.3e-20 Score=173.63 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=162.9
Q ss_pred CceeeeEEecCCC--ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC
Q 043192 38 HVDSKDIIYSSEH--NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED 115 (316)
Q Consensus 38 ~~~~~~v~~~~~~--~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~ 115 (316)
....+.+.+++.+ .+++.+.++++...+++.|+||++|||....... .+......++++ |++|+.+++|++++.
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p---~f~~~~~~l~~r-G~~v~~~n~RGs~g~ 488 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA---DFSFSRLSLLDR-GFVYAIVHVRGGGEL 488 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC---CccHHHHHHHHC-CcEEEEEEcCCCCcc
Confidence 4477888887644 5677566655432345679999999976544333 244444556554 999999999998653
Q ss_pred C-----------CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccce
Q 043192 116 P-----------VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDG 184 (316)
Q Consensus 116 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~ 184 (316)
. -...++|+.++++||.++. .+|++|++++|.|+||.++.+++.+.++ .++|
T Consensus 489 G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g-----------~~d~~rl~i~G~S~GG~l~~~~~~~~Pd------lf~A 551 (686)
T PRK10115 489 GQQWYEDGKFLKKKNTFNDYLDACDALLKLG-----------YGSPSLCYGMGGSAGGMLMGVAINQRPE------LFHG 551 (686)
T ss_pred CHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC-----------CCChHHeEEEEECHHHHHHHHHHhcChh------heeE
Confidence 2 2356899999999999875 5999999999999999999999988744 6999
Q ss_pred eEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCC--CC--CccCCCCCCcccCCCCCc-EEEEEcCCccccc
Q 043192 185 ICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGL--DD--PIINPVADPKLSSLGCNR-LLVFVAQLDLLRG 259 (316)
Q Consensus 185 ~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~P-~li~~G~~D~~~~ 259 (316)
+|+..|+++.......... +. ... .+..+ +..... .. ...||+. .+.+... | +||+||.+|.-|.
T Consensus 552 ~v~~vp~~D~~~~~~~~~~-p~----~~~-~~~e~-G~p~~~~~~~~l~~~SP~~--~v~~~~~-P~lLi~~g~~D~RV~ 621 (686)
T PRK10115 552 VIAQVPFVDVVTTMLDESI-PL----TTG-EFEEW-GNPQDPQYYEYMKSYSPYD--NVTAQAY-PHLLVTTGLHDSQVQ 621 (686)
T ss_pred EEecCCchhHhhhcccCCC-CC----Chh-HHHHh-CCCCCHHHHHHHHHcCchh--ccCccCC-CceeEEecCCCCCcC
Confidence 9999999986643211100 00 001 11111 211111 00 1256776 4555655 6 7788999998774
Q ss_pred --hHHHHHHHHHhCCCCcccEEEEe---CCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 260 --RGLYYVTKLKESGWKGDAKVSEI---MGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 260 --~~~~~~~~l~~~g~~~~~~~~~~---~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++.+|+++|++.|. +++++++ +++||+.. .+.....+.......||-.
T Consensus 622 ~~~~~k~~a~Lr~~~~--~~~~vl~~~~~~~GHg~~---~~r~~~~~~~A~~~aFl~~ 674 (686)
T PRK10115 622 YWEPAKWVAKLRELKT--DDHLLLLCTDMDSGHGGK---SGRFKSYEGVAMEYAFLIA 674 (686)
T ss_pred chHHHHHHHHHHhcCC--CCceEEEEecCCCCCCCC---cCHHHHHHHHHHHHHHHHH
Confidence 89999999999998 7888888 99999843 2334444555556666644
No 15
>PLN02442 S-formylglutathione hydrolase
Probab=99.86 E-value=1.3e-19 Score=155.88 Aligned_cols=227 Identities=12% Similarity=0.121 Sum_probs=137.7
Q ss_pred eeEEecC---CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC-----
Q 043192 42 KDIIYSS---EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP----- 113 (316)
Q Consensus 42 ~~v~~~~---~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~----- 113 (316)
..+++.| +..+.+.+|+|+.. ..+++|+|+++||++. +........-+.+++...|++|+.+|....+
T Consensus 19 ~~~~~~s~~l~~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~~---~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 19 RRYKHFSSTLGCSMTFSVYFPPAS-DSGKVPVLYWLSGLTC---TDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred EEEEEeccccCCceEEEEEcCCcc-cCCCCCEEEEecCCCc---ChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 3444444 45899999999843 3467999999999553 3221111122346667779999999965322
Q ss_pred CC---------C-C-----C-----cchhh-HHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 114 ED---------P-V-----P-----AAHED-SWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 114 ~~---------~-~-----~-----~~~~d-~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.. . + + ..... ......++.+... .+|.++++|+|+||||.+|+.++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~----------~~~~~~~~i~G~S~GG~~a~~~a~~~ 164 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD----------QLDTSRASIFGHSMGGHGALTIYLKN 164 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH----------hcCCCceEEEEEChhHHHHHHHHHhC
Confidence 00 0 0 0 00111 1222334433321 26789999999999999999999987
Q ss_pred hcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCC--CCCCccCCCCCCcccCCCCCcEEEE
Q 043192 173 GQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSG--LDDPIINPVADPKLSSLGCNRLLVF 250 (316)
Q Consensus 173 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~li~ 250 (316)
++ .++++++++|..+..... . . ......+...... ......+++. ......+ |++++
T Consensus 165 p~------~~~~~~~~~~~~~~~~~~--~--~--------~~~~~~~~g~~~~~~~~~d~~~~~~--~~~~~~~-pvli~ 223 (283)
T PLN02442 165 PD------KYKSVSAFAPIANPINCP--W--G--------QKAFTNYLGSDKADWEEYDATELVS--KFNDVSA-TILID 223 (283)
T ss_pred ch------hEEEEEEECCccCcccCc--h--h--------hHHHHHHcCCChhhHHHcChhhhhh--hccccCC-CEEEE
Confidence 54 589999999987633110 0 0 0001111111100 0001111211 2223344 99999
Q ss_pred EcCCccccc---hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 251 VAQLDLLRG---RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 251 ~G~~D~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
||++|.+++ +++.+++.+++.|. ++++.+++|.+|.|..+ ..++++.+.|..+
T Consensus 224 ~G~~D~~v~~~~~s~~~~~~l~~~g~--~~~~~~~pg~~H~~~~~-------~~~i~~~~~~~~~ 279 (283)
T PLN02442 224 QGEADKFLKEQLLPENFEEACKEAGA--PVTLRLQPGYDHSYFFI-------ATFIDDHINHHAQ 279 (283)
T ss_pred ECCCCccccccccHHHHHHHHHHcCC--CeEEEEeCCCCccHHHH-------HHHHHHHHHHHHH
Confidence 999998876 37899999999998 89999999999987732 4555555555543
No 16
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.84 E-value=1.3e-19 Score=150.45 Aligned_cols=193 Identities=17% Similarity=0.152 Sum_probs=132.7
Q ss_pred EEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCC--CCC-------------
Q 043192 53 SARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPE--DPV------------- 117 (316)
Q Consensus 53 ~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~~~------------- 117 (316)
.+++..|++. ++.|+||++|+.. |-.. ....++.+++++ ||.|++||+-.... ...
T Consensus 2 ~ay~~~P~~~---~~~~~Vvv~~d~~---G~~~--~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PF01738_consen 2 DAYVARPEGG---GPRPAVVVIHDIF---GLNP--NIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFA 72 (218)
T ss_dssp EEEEEEETTS---SSEEEEEEE-BTT---BS-H--HHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHH
T ss_pred eEEEEeCCCC---CCCCEEEEEcCCC---CCch--HHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHh
Confidence 5678889865 6889999999833 3332 455677777765 99999999764433 110
Q ss_pred ---CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 118 ---PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 118 ---~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
.....|+..++++|+++. .++..||+++|+|+||.+|+.++.+. ..+++++..+|....
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~-----------~~~~~kig~vGfc~GG~~a~~~a~~~-------~~~~a~v~~yg~~~~ 134 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQP-----------EVDPGKIGVVGFCWGGKLALLLAARD-------PRVDAAVSFYGGSPP 134 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTT-----------TCEEEEEEEEEETHHHHHHHHHHCCT-------TTSSEEEEES-SSSG
T ss_pred hhHHHHHHHHHHHHHHHHhcc-----------ccCCCcEEEEEEecchHHhhhhhhhc-------cccceEEEEcCCCCC
Confidence 122456778888888875 36789999999999999999988764 258999999981000
Q ss_pred CCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCC
Q 043192 195 SAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESG 272 (316)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g 272 (316)
.. +.. ...++.+ |+++++|++|+.++ ....+.+.|++.|
T Consensus 135 --------------~~----------------------~~~--~~~~~~~-P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 175 (218)
T PF01738_consen 135 --------------PP----------------------PLE--DAPKIKA-PVLILFGENDPFFPPEEVEALEEALKAAG 175 (218)
T ss_dssp --------------GG----------------------HHH--HGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTT
T ss_pred --------------Cc----------------------chh--hhcccCC-CEeecCccCCCCCChHHHHHHHHHHHhcC
Confidence 00 000 2334445 99999999999885 4578999999999
Q ss_pred CCcccEEEEeCCCcccccccCC---CcHHHHHHHHHHHHHHhcC
Q 043192 273 WKGDAKVSEIMGETHVFHLLNP---SSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 273 ~~~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~~i~~fl~~~ 313 (316)
. ++++++|+|++|+|..... +...+++.++.+++||++|
T Consensus 176 ~--~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 176 V--DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp T--TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred C--cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 8 9999999999999996432 4567899999999999986
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=99.84 E-value=4.6e-19 Score=156.24 Aligned_cols=233 Identities=15% Similarity=0.090 Sum_probs=138.4
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----------
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP---------- 118 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---------- 118 (316)
+.++.+..|.|. .+.++||++||.+ ++.. .|..++..+++ .||.|+++|+|+.+.+..+
T Consensus 40 g~~l~~~~~~~~-----~~~~~vll~HG~~---~~~~--~y~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 40 DIPIRFVRFRAP-----HHDRVVVICPGRI---ESYV--KYAELAYDLFH-LGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred CCEEEEEEccCC-----CCCcEEEEECCcc---chHH--HHHHHHHHHHH-CCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 335666666664 2347899999943 2222 45566666655 5999999999988765321
Q ss_pred ---cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 119 ---AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 119 ---~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
...+|+...++.+.+. .+..+++|+||||||.+++.++.+.+ ..++++|+++|.....
T Consensus 109 ~~~~~~~d~~~~~~~~~~~-------------~~~~~~~l~GhSmGG~ia~~~a~~~p------~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQP-------------GPYRKRYALAHSMGGAILTLFLQRHP------GVFDAIALCAPMFGIV 169 (330)
T ss_pred cHHHHHHHHHHHHHHHHhc-------------CCCCCeEEEEEcHHHHHHHHHHHhCC------CCcceEEEECchhccC
Confidence 1223444444333221 34578999999999999999998874 4689999999976432
Q ss_pred CCCCCCC-------------------C--C--CC--cccc---cch----hhhhhhCCCCCCCC-CCcc---C-C-----
Q 043192 196 APIPGEP-------------------Y--V--PE--YWTT---IID----EPWQIARPDTSGLD-DPII---N-P----- 233 (316)
Q Consensus 196 ~~~~~~~-------------------~--~--~~--~~~~---~~~----~~~~~~~~~~~~~~-~~~~---~-~----- 233 (316)
....... . . .. +... ... .....+........ .... . .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T PRK10749 170 LPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGE 249 (330)
T ss_pred CCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHH
Confidence 1110000 0 0 00 0000 000 01111111100000 0000 0 0
Q ss_pred CCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCC-cccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHH
Q 043192 234 VADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWK-GDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFI 310 (316)
Q Consensus 234 ~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl 310 (316)
.....+.++.. |+|++||++|.+++ .++.+++.++.++.+ .++++++++|++|......+ ...++++++|.+||
T Consensus 250 ~~~~~~~~i~~-P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~--~~r~~v~~~i~~fl 326 (330)
T PRK10749 250 QVLAGAGDITT-PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD--AMRSVALNAIVDFF 326 (330)
T ss_pred HHHhhccCCCC-CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc--HHHHHHHHHHHHHH
Confidence 00013456667 99999999999885 567788888776531 15689999999997764322 34788999999999
Q ss_pred hcCC
Q 043192 311 HGKD 314 (316)
Q Consensus 311 ~~~~ 314 (316)
+++.
T Consensus 327 ~~~~ 330 (330)
T PRK10749 327 NRHN 330 (330)
T ss_pred hhcC
Confidence 9864
No 18
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=5.2e-19 Score=158.27 Aligned_cols=230 Identities=13% Similarity=0.082 Sum_probs=139.4
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC--------cc
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP--------AA 120 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~ 120 (316)
+..+.+..|.|... .++++||++||.+. +.. .|..++..+++ .||.|+++|+|+++.+... ..
T Consensus 120 ~~~l~~~~~~p~~~---~~~~~Vl~lHG~~~---~~~--~~~~~a~~L~~-~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 190 (395)
T PLN02652 120 RNALFCRSWAPAAG---EMRGILIIIHGLNE---HSG--RYLHFAKQLTS-CGFGVYAMDWIGHGGSDGLHGYVPSLDYV 190 (395)
T ss_pred CCEEEEEEecCCCC---CCceEEEEECCchH---HHH--HHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCcCHHHH
Confidence 45778889988643 35689999999542 222 35566666654 4999999999988654321 23
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC-
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP- 199 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~- 199 (316)
.+|+..+++++.... +..+++|+||||||.+++.++. +++. ...++++|+.+|+........
T Consensus 191 ~~Dl~~~l~~l~~~~-------------~~~~i~lvGhSmGG~ial~~a~-~p~~---~~~v~glVL~sP~l~~~~~~~~ 253 (395)
T PLN02652 191 VEDTEAFLEKIRSEN-------------PGVPCFLFGHSTGGAVVLKAAS-YPSI---EDKLEGIVLTSPALRVKPAHPI 253 (395)
T ss_pred HHHHHHHHHHHHHhC-------------CCCCEEEEEECHHHHHHHHHHh-ccCc---ccccceEEEECcccccccchHH
Confidence 567777777776542 2347999999999999998764 3321 236999999999864332100
Q ss_pred -------------CCCCCCC----cc-cccchhhhhhhCCCCCCCCCCc---------cCCCCCCcccCCCCCcEEEEEc
Q 043192 200 -------------GEPYVPE----YW-TTIIDEPWQIARPDTSGLDDPI---------INPVADPKLSSLGCNRLLVFVA 252 (316)
Q Consensus 200 -------------~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~P~li~~G 252 (316)
....... .. ..........+........... ........+.++.+ |+|++||
T Consensus 254 ~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~v-PvLIi~G 332 (395)
T PLN02652 254 VGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTV-PFMVLHG 332 (395)
T ss_pred HHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCC-CEEEEEe
Confidence 0000000 00 0000001111110000000000 00000114566777 9999999
Q ss_pred CCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 253 QLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 253 ~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
++|.+++ .++.+++++... ..+++.|+++.|..... ++.+++++++.+||+++
T Consensus 333 ~~D~vvp~~~a~~l~~~~~~~----~k~l~~~~ga~H~l~~e----~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 333 TADRVTDPLASQDLYNEAASR----HKDIKLYDGFLHDLLFE----PEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCCCCCCHHHHHHHHHhcCCC----CceEEEECCCeEEeccC----CCHHHHHHHHHHHHHHH
Confidence 9999885 566666665432 46889999999976532 34689999999999875
No 19
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=1.8e-18 Score=144.08 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=156.2
Q ss_pred eeEEecCC-CceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC--CC----
Q 043192 42 KDIIYSSE-HNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA--PE---- 114 (316)
Q Consensus 42 ~~v~~~~~-~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~---- 114 (316)
+++.++.. ..+...+..|++. ++.|+||++|+ ..|-.. .....+++++.+ ||.|++||.-.. ..
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~---~~~P~VIv~he---i~Gl~~--~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~ 73 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA---GGFPGVIVLHE---IFGLNP--HIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIE 73 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC---CCCCEEEEEec---ccCCch--HHHHHHHHHHhC-CcEEEechhhccCCCCCccc
Confidence 45566553 4788999999877 34499999998 334433 466788888777 999999995421 10
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCc
Q 043192 115 -------------DPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGIN 181 (316)
Q Consensus 115 -------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~ 181 (316)
........|+.++++||..+. +++..+|+++|+||||.+++.++.+.+ .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~-----------~~~~~~ig~~GfC~GG~~a~~~a~~~~-------~ 135 (236)
T COG0412 74 DEPAELETGLVERVDPAEVLADIDAALDYLARQP-----------QVDPKRIGVVGFCMGGGLALLAATRAP-------E 135 (236)
T ss_pred ccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC-----------CCCCceEEEEEEcccHHHHHHhhcccC-------C
Confidence 111344678999999999875 478899999999999999999998753 5
Q ss_pred cceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--
Q 043192 182 IDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG-- 259 (316)
Q Consensus 182 ~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~-- 259 (316)
+++.++++|........ ...++++ |+|+.+|+.|..++
T Consensus 136 v~a~v~fyg~~~~~~~~---------------------------------------~~~~~~~-pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 136 VKAAVAFYGGLIADDTA---------------------------------------DAPKIKV-PVLLHLAGEDPYIPAA 175 (236)
T ss_pred ccEEEEecCCCCCCccc---------------------------------------ccccccC-cEEEEecccCCCCChh
Confidence 99999999866322110 1234455 99999999999874
Q ss_pred hHHHHHHHHHhCCCCcccEEEEeCCCccccccc------CCCcHHHHHHHHHHHHHHhcCC
Q 043192 260 RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLL------NPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 260 ~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
....+.+++.++++ .+++.+|+++.|+|... ..+...+++.++++.+||+++.
T Consensus 176 ~~~~~~~~~~~~~~--~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 176 DVDALAAALEDAGV--KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHHHHHhcCC--CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 56888999999987 89999999999999954 3366778999999999999864
No 20
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.5e-20 Score=143.87 Aligned_cols=203 Identities=15% Similarity=0.141 Sum_probs=152.7
Q ss_pred CceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-C
Q 043192 38 HVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-P 116 (316)
Q Consensus 38 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~ 116 (316)
....+++.|..++...+++|.|.+. .|++||||||.|..|+... .-.. ..-+.+.||.|++++|-++++. .
T Consensus 42 i~r~e~l~Yg~~g~q~VDIwg~~~~-----~klfIfIHGGYW~~g~rk~--clsi-v~~a~~~gY~vasvgY~l~~q~ht 113 (270)
T KOG4627|consen 42 IIRVEHLRYGEGGRQLVDIWGSTNQ-----AKLFIFIHGGYWQEGDRKM--CLSI-VGPAVRRGYRVASVGYNLCPQVHT 113 (270)
T ss_pred ccchhccccCCCCceEEEEecCCCC-----ccEEEEEecchhhcCchhc--ccch-hhhhhhcCeEEEEeccCcCccccc
Confidence 5566789999888999999999543 4899999999999888652 2232 3455667999999999999875 6
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 117 VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 117 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
....+.++...++|+.+.- -+.+.+.+.|||+|+++|+.+..+.. .++|.|+++.|++++..+
T Consensus 114 L~qt~~~~~~gv~filk~~------------~n~k~l~~gGHSaGAHLa~qav~R~r-----~prI~gl~l~~GvY~l~E 176 (270)
T KOG4627|consen 114 LEQTMTQFTHGVNFILKYT------------ENTKVLTFGGHSAGAHLAAQAVMRQR-----SPRIWGLILLCGVYDLRE 176 (270)
T ss_pred HHHHHHHHHHHHHHHHHhc------------ccceeEEEcccchHHHHHHHHHHHhc-----CchHHHHHHHhhHhhHHH
Confidence 7888899999999998874 45577999999999999999988753 467999999999997765
Q ss_pred CCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcc--ccchHHHHHHHHHhCCCC
Q 043192 197 PIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDL--LRGRGLYYVTKLKESGWK 274 (316)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~--~~~~~~~~~~~l~~~g~~ 274 (316)
......-...-. ........|+... .+.++.. |+|++.|.+|. ++++.+.|++.++
T Consensus 177 L~~te~g~dlgL---------------t~~~ae~~Scdl~-~~~~v~~-~ilVv~~~~espklieQnrdf~~q~~----- 234 (270)
T KOG4627|consen 177 LSNTESGNDLGL---------------TERNAESVSCDLW-EYTDVTV-WILVVAAEHESPKLIEQNRDFADQLR----- 234 (270)
T ss_pred HhCCccccccCc---------------ccchhhhcCccHH-HhcCcee-eeeEeeecccCcHHHHhhhhHHHHhh-----
Confidence 433221110000 0111112333333 5566777 99999999995 7789999999988
Q ss_pred cccEEEEeCCCccc
Q 043192 275 GDAKVSEIMGETHV 288 (316)
Q Consensus 275 ~~~~~~~~~~~~H~ 288 (316)
..++.++++.+|.
T Consensus 235 -~a~~~~f~n~~hy 247 (270)
T KOG4627|consen 235 -KASFTLFKNYDHY 247 (270)
T ss_pred -hcceeecCCcchh
Confidence 4688899999993
No 21
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.82 E-value=3.1e-18 Score=154.53 Aligned_cols=230 Identities=13% Similarity=0.079 Sum_probs=135.4
Q ss_pred eeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC
Q 043192 41 SKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP 118 (316)
Q Consensus 41 ~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~ 118 (316)
.+.|.++. +..+.+.++.|+. +++.|+||++||.+ +... ..+..+...++ +.||.|+++|+|+.+.+...
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~---~~~~-~~~~~~~~~La-~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLD---SLQT-DYYRLFRDYLA-PRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcc---cchh-hhHHHHHHHHH-hCCCEEEEECCCCCCCCCCC
Confidence 45666654 3368889999973 35788887766633 2111 13444455554 55999999999987654321
Q ss_pred ----cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 119 ----AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 119 ----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
........+++++.+.. .+|.+||+++||||||++|+.++...+ .+++++|+++|.+..
T Consensus 240 ~~~~d~~~~~~avld~l~~~~-----------~vd~~ri~l~G~S~GG~~Al~~A~~~p------~ri~a~V~~~~~~~~ 302 (414)
T PRK05077 240 KLTQDSSLLHQAVLNALPNVP-----------WVDHTRVAAFGFRFGANVAVRLAYLEP------PRLKAVACLGPVVHT 302 (414)
T ss_pred CccccHHHHHHHHHHHHHhCc-----------ccCcccEEEEEEChHHHHHHHHHHhCC------cCceEEEEECCccch
Confidence 11222346777887653 378899999999999999999998753 369999999988642
Q ss_pred CCCCCCCCCCCCcccccchhhhhhhCCCCCCC------CCCccCCCCCCcc-cCCCCCcEEEEEcCCccccc--hHHHHH
Q 043192 195 SAPIPGEPYVPEYWTTIIDEPWQIARPDTSGL------DDPIINPVADPKL-SSLGCNRLLVFVAQLDLLRG--RGLYYV 265 (316)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~P~li~~G~~D~~~~--~~~~~~ 265 (316)
........ ... .......+....+..... .-...+......+ .++++ |+|+++|++|.+++ .++.+.
T Consensus 303 ~~~~~~~~--~~~-p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~-PvLiI~G~~D~ivP~~~a~~l~ 378 (414)
T PRK05077 303 LLTDPKRQ--QQV-PEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPT-PMLSGYWKNDPFSPEEDSRLIA 378 (414)
T ss_pred hhcchhhh--hhc-hHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCC-cEEEEecCCCCCCCHHHHHHHH
Confidence 11100000 000 000000000001100000 0000010000011 35667 99999999999885 334333
Q ss_pred HHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 266 TKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 266 ~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+... +.+++.+|++.| + +...++++.+.+||+++
T Consensus 379 ----~~~~--~~~l~~i~~~~~-~-------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 379 ----SSSA--DGKLLEIPFKPV-Y-------RNFDKALQEISDWLEDR 412 (414)
T ss_pred ----HhCC--CCeEEEccCCCc-c-------CCHHHHHHHHHHHHHHH
Confidence 3332 679999999632 2 33479999999999876
No 22
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.82 E-value=1.2e-18 Score=150.35 Aligned_cols=230 Identities=18% Similarity=0.117 Sum_probs=141.3
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-----CCcchhh
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-----VPAAHED 123 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~~~~~~d 123 (316)
+..+.+..|.+... +..+||++||.+...+ .|..++..+.. .||.|+..|.|+++.+. ....++|
T Consensus 19 ~~~~~~~~~~~~~~----~~g~Vvl~HG~~Eh~~-----ry~~la~~l~~-~G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 19 GTRLRYRTWAAPEP----PKGVVVLVHGLGEHSG-----RYEELADDLAA-RGFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred CceEEEEeecCCCC----CCcEEEEecCchHHHH-----HHHHHHHHHHh-CCCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 44667777777644 3379999999765433 35555666655 59999999999876653 1122344
Q ss_pred HHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC---CCCC
Q 043192 124 SWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA---PIPG 200 (316)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~---~~~~ 200 (316)
....++.+.+.... .....+++|+||||||.+|+.++.+.+ ..++++|+.+|++.... ...-
T Consensus 89 ~~~dl~~~~~~~~~---------~~~~~p~~l~gHSmGg~Ia~~~~~~~~------~~i~~~vLssP~~~l~~~~~~~~~ 153 (298)
T COG2267 89 YVDDLDAFVETIAE---------PDPGLPVFLLGHSMGGLIALLYLARYP------PRIDGLVLSSPALGLGGAILRLIL 153 (298)
T ss_pred HHHHHHHHHHHHhc---------cCCCCCeEEEEeCcHHHHHHHHHHhCC------ccccEEEEECccccCChhHHHHHH
Confidence 44444444333211 012368999999999999999999985 46999999999987662 0000
Q ss_pred C--------CCCCCccccc-------------chhhhhhhCCCCCCCCCCcc-----------------C-CCCCCcccC
Q 043192 201 E--------PYVPEYWTTI-------------IDEPWQIARPDTSGLDDPII-----------------N-PVADPKLSS 241 (316)
Q Consensus 201 ~--------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~ 241 (316)
. ...+.+.... .......| ..|+.+ . +... +...
T Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~------~~dP~~~~~~~~~~w~~~~~~a~~~~~~~-~~~~ 226 (298)
T COG2267 154 ARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY------EADPLIGVGGPVSRWVDLALLAGRVPALR-DAPA 226 (298)
T ss_pred HHHhcccccccccccccCcccccCcCcchhhcCHHHHHHH------hcCCccccCCccHHHHHHHHHhhcccchh-cccc
Confidence 0 0000000000 00001111 112211 0 0000 2334
Q ss_pred CCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 242 LGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 242 ~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
+.. |+||++|++|.+++..+...+..+..+.+ +.++++|+|+.|......+ ...+++++++.+||.++.
T Consensus 227 ~~~-PvLll~g~~D~vv~~~~~~~~~~~~~~~~-~~~~~~~~g~~He~~~E~~--~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 227 IAL-PVLLLQGGDDRVVDNVEGLARFFERAGSP-DKELKVIPGAYHELLNEPD--RAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccC-CEEEEecCCCccccCcHHHHHHHHhcCCC-CceEEecCCcchhhhcCcc--hHHHHHHHHHHHHHHhhc
Confidence 455 99999999999886344455666666663 5799999999998875422 222899999999999865
No 23
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=8.6e-19 Score=142.23 Aligned_cols=208 Identities=18% Similarity=0.188 Sum_probs=147.2
Q ss_pred eEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC----C
Q 043192 43 DIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV----P 118 (316)
Q Consensus 43 ~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~ 118 (316)
.+....+..+.+..+.|+.. .+++++|.||-.. +.. ....+...+....++.++.+||++.+.++. .
T Consensus 39 ~~~t~rgn~~~~~y~~~~~~----~~~~lly~hGNa~---Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~ 109 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPPEA----AHPTLLYSHGNAA---DLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER 109 (258)
T ss_pred EeecCCCCEEEEEEEcCccc----cceEEEEcCCccc---chH--HHHHHHHHHhhcccceEEEEecccccccCCCcccc
Confidence 33334344555666666543 6689999999532 222 345666677777799999999998765432 3
Q ss_pred cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCC
Q 043192 119 AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPI 198 (316)
Q Consensus 119 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 198 (316)
....|+.++++||++.. + ..++|+|+|+|+|...++.+|.+. + ++++|+.+|+.++....
T Consensus 110 n~y~Di~avye~Lr~~~-----------g-~~~~Iil~G~SiGt~~tv~Lasr~-------~-~~alVL~SPf~S~~rv~ 169 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRY-----------G-SPERIILYGQSIGTVPTVDLASRY-------P-LAAVVLHSPFTSGMRVA 169 (258)
T ss_pred cchhhHHHHHHHHHhhc-----------C-CCceEEEEEecCCchhhhhHhhcC-------C-cceEEEeccchhhhhhh
Confidence 45789999999999984 2 679999999999999999999885 2 89999999998765433
Q ss_pred CCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcc
Q 043192 199 PGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGD 276 (316)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~ 276 (316)
-.... ...|...+.. +. +++.+.+ |+|++||++|.+++ ++.++++.++. .
T Consensus 170 ~~~~~---------~~~~~d~f~~-----------i~--kI~~i~~-PVLiiHgtdDevv~~sHg~~Lye~~k~-----~ 221 (258)
T KOG1552|consen 170 FPDTK---------TTYCFDAFPN-----------IE--KISKITC-PVLIIHGTDDEVVDFSHGKALYERCKE-----K 221 (258)
T ss_pred ccCcc---------eEEeeccccc-----------cC--cceeccC-CEEEEecccCceecccccHHHHHhccc-----c
Confidence 22100 0011111110 11 7778888 99999999999986 77888888875 5
Q ss_pred cEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 277 AKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 277 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
++-....|++|...... .++++.+..|+...
T Consensus 222 ~epl~v~g~gH~~~~~~------~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 222 VEPLWVKGAGHNDIELY------PEYIEHLRRFISSV 252 (258)
T ss_pred CCCcEEecCCCcccccC------HHHHHHHHHHHHHh
Confidence 68888889999766433 47777777777543
No 24
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=9e-19 Score=167.44 Aligned_cols=237 Identities=16% Similarity=0.082 Sum_probs=169.3
Q ss_pred CceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC
Q 043192 38 HVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV 117 (316)
Q Consensus 38 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~ 117 (316)
.....++.+ ++-...+.+.+|++..+.++.|+|+.+|||... ..........|...++...|++|+.+|+|+++....
T Consensus 497 ~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~s-q~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~ 574 (755)
T KOG2100|consen 497 IVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGS-QSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGW 574 (755)
T ss_pred cceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCc-ceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcch
Confidence 334455555 444667788999998777899999999998852 222222334556667888899999999998865432
Q ss_pred -----------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeE
Q 043192 118 -----------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGIC 186 (316)
Q Consensus 118 -----------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i 186 (316)
...++|...+++++.+.. .+|.+||+|+|+|.||.+++.++...+. ..++|.+
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~-----------~iD~~ri~i~GwSyGGy~t~~~l~~~~~-----~~fkcgv 638 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLP-----------FIDRSRVAIWGWSYGGYLTLKLLESDPG-----DVFKCGV 638 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcc-----------cccHHHeEEeccChHHHHHHHHhhhCcC-----ceEEEEE
Confidence 234789999999998876 4999999999999999999999988753 2589999
Q ss_pred EecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcccc--chHHHH
Q 043192 187 LLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLR--GRGLYY 264 (316)
Q Consensus 187 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~ 264 (316)
+++|+++.. ...+....... -.+..........++.. .+.+++.+-.|++||+.|..+ +++..+
T Consensus 639 avaPVtd~~-~yds~~terym-----------g~p~~~~~~y~e~~~~~--~~~~~~~~~~LliHGt~DdnVh~q~s~~~ 704 (755)
T KOG2100|consen 639 AVAPVTDWL-YYDSTYTERYM-----------GLPSENDKGYEESSVSS--PANNIKTPKLLLIHGTEDDNVHFQQSAIL 704 (755)
T ss_pred Eecceeeee-eecccccHhhc-----------CCCccccchhhhccccc--hhhhhccCCEEEEEcCCcCCcCHHHHHHH
Confidence 999999765 32222111110 01110010011222333 445555523599999999887 688999
Q ss_pred HHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 265 VTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 265 ~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.++|+.+|+ ++++.+||+.+|++... .........+..|+..
T Consensus 705 ~~aL~~~gv--~~~~~vypde~H~is~~----~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 705 IKALQNAGV--PFRLLVYPDENHGISYV----EVISHLYEKLDRFLRD 746 (755)
T ss_pred HHHHHHCCC--ceEEEEeCCCCcccccc----cchHHHHHHHHHHHHH
Confidence 999999999 89999999999998843 3346888899999984
No 25
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.80 E-value=1e-17 Score=145.08 Aligned_cols=221 Identities=16% Similarity=0.171 Sum_probs=144.1
Q ss_pred ceEEEEEe-cCCCCCCCCccEEEEEcCCcccccCcchhhhHHHH---HHHHHhcCcEEEeecCCCCC----CCCCCcchh
Q 043192 51 NLSARIYF-PNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYM---NTLVSHAKIIAVSVDYRRAP----EDPVPAAHE 122 (316)
Q Consensus 51 ~~~~~~~~-P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~---~~l~~~~g~~v~~~d~r~~~----~~~~~~~~~ 122 (316)
....+++. |...+ .+..|+|||+|||||..+.... ...++ ..++. ...++++||.+.+ +..+|.++.
T Consensus 105 ~~s~Wlvk~P~~~~-pk~DpVlIYlHGGGY~l~~~p~--qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~ 179 (374)
T PF10340_consen 105 SQSYWLVKAPNRFK-PKSDPVLIYLHGGGYFLGTTPS--QIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLR 179 (374)
T ss_pred cceEEEEeCCcccC-CCCCcEEEEEcCCeeEecCCHH--HHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHH
Confidence 34466666 65432 2446999999999998887653 22222 23333 4689999999887 778999999
Q ss_pred hHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC-
Q 043192 123 DSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE- 201 (316)
Q Consensus 123 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~- 201 (316)
++.+.+++|.+.. ..+.|.|||.|+||++++.++....... ....++++|++|||+.........
T Consensus 180 qlv~~Y~~Lv~~~-------------G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLISPWv~l~~~~~~~~ 245 (374)
T PF10340_consen 180 QLVATYDYLVESE-------------GNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILISPWVNLVPQDSQEG 245 (374)
T ss_pred HHHHHHHHHHhcc-------------CCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEECCCcCCcCCCCCCC
Confidence 9999999999542 2478999999999999999988765422 135789999999999876211111
Q ss_pred --CC-C---CCcccccchhhhhhhCCCCCCC----CCCccCCCC---CCcccCC-CCCcEEEEEcCCccccchHHHHHHH
Q 043192 202 --PY-V---PEYWTTIIDEPWQIARPDTSGL----DDPIINPVA---DPKLSSL-GCNRLLVFVAQLDLLRGRGLYYVTK 267 (316)
Q Consensus 202 --~~-~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~-~~~P~li~~G~~D~~~~~~~~~~~~ 267 (316)
.. . ..+.......+...|.+..... ..+...+-. ...+.++ +.--++|+.|+++.+.++..+|.++
T Consensus 246 ~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~ 325 (374)
T PF10340_consen 246 SSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAKK 325 (374)
T ss_pred ccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHHH
Confidence 11 1 1111222233344444441111 122222111 1133332 1116999999999999999999999
Q ss_pred HHhCCCC---cccEEEEeCCCccccc
Q 043192 268 LKESGWK---GDAKVSEIMGETHVFH 290 (316)
Q Consensus 268 l~~~g~~---~~~~~~~~~~~~H~~~ 290 (316)
+.+.+.. ....+.+.+++.|.-.
T Consensus 326 ~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 326 LNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred HhhcCccccCCcceEEEecCCccccc
Confidence 9976530 0357888899999543
No 26
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.79 E-value=2.1e-18 Score=136.09 Aligned_cols=206 Identities=12% Similarity=0.068 Sum_probs=137.7
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-------PVPAAHEDSWTALKWVASHANGRGPE 141 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------~~~~~~~d~~~~~~~l~~~~~~~~~~ 141 (316)
..|++||| .+|++. .. .++.+.+++.||.|.+|.|++++.. ++...++|+.+++++|.+..
T Consensus 16 ~AVLllHG---FTGt~~--Dv-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g------ 83 (243)
T COG1647 16 RAVLLLHG---FTGTPR--DV-RMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG------ 83 (243)
T ss_pred EEEEEEec---cCCCcH--HH-HHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC------
Confidence 78999999 677776 23 4555666777999999999988643 34556789999999999764
Q ss_pred ccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC----------CCCCCccccc
Q 043192 142 DWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE----------PYVPEYWTTI 211 (316)
Q Consensus 142 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~----------~~~~~~~~~~ 211 (316)
-+.|+++|.||||-+|+.+|.+++ +++++.+|+.+.......-. ........+.
T Consensus 84 --------y~eI~v~GlSmGGv~alkla~~~p--------~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~ 147 (243)
T COG1647 84 --------YDEIAVVGLSMGGVFALKLAYHYP--------PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQ 147 (243)
T ss_pred --------CCeEEEEeecchhHHHHHHHhhCC--------ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHH
Confidence 378999999999999999999873 78999988877543221100 0000011112
Q ss_pred chhhhhhhCCCCCC---CCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCc
Q 043192 212 IDEPWQIARPDTSG---LDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGET 286 (316)
Q Consensus 212 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~ 286 (316)
....+..+...... .....+.-... .+..+.. |++++.|.+|..++ .+..+++.+... +.++..|++.+
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~i~~~~~-~~~~I~~-pt~vvq~~~D~mv~~~sA~~Iy~~v~s~----~KeL~~~e~Sg 221 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLKKLIKDARR-SLDKIYS-PTLVVQGRQDEMVPAESANFIYDHVESD----DKELKWLEGSG 221 (243)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHh-hhhhccc-chhheecccCCCCCHHHHHHHHHhccCC----cceeEEEccCC
Confidence 22222222210000 00000000000 4555666 99999999999986 344555555433 78999999999
Q ss_pred ccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 287 HVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 287 H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
|.+. ..++.+++.+.++.||+.
T Consensus 222 HVIt----~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 222 HVIT----LDKERDQVEEDVITFLEK 243 (243)
T ss_pred ceee----cchhHHHHHHHHHHHhhC
Confidence 9887 458899999999999974
No 27
>PRK11460 putative hydrolase; Provisional
Probab=99.78 E-value=3.5e-17 Score=136.70 Aligned_cols=172 Identities=12% Similarity=0.071 Sum_probs=108.9
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhc-CcEEEeecCCCC----CCCCCC--------cchhh-------HH
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHA-KIIAVSVDYRRA----PEDPVP--------AAHED-------SW 125 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~----~~~~~~--------~~~~d-------~~ 125 (316)
.+.|+||++||.| ++.. .+..+...+.... .+.++.++-+.. +...|. ...++ +.
T Consensus 14 ~~~~~vIlLHG~G---~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCC---CChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 4568999999955 3333 4556666665541 245555553211 111111 11112 22
Q ss_pred HHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCC
Q 043192 126 TALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVP 205 (316)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~ 205 (316)
+.++++.++ . .++.++|+|+|+|+||.+++.++.+.+ ..+.+++++++.+... ..
T Consensus 89 ~~i~~~~~~---~--------~~~~~~i~l~GfS~Gg~~al~~a~~~~------~~~~~vv~~sg~~~~~---~~----- 143 (232)
T PRK11460 89 ETVRYWQQQ---S--------GVGASATALIGFSQGAIMALEAVKAEP------GLAGRVIAFSGRYASL---PE----- 143 (232)
T ss_pred HHHHHHHHh---c--------CCChhhEEEEEECHHHHHHHHHHHhCC------CcceEEEEeccccccc---cc-----
Confidence 333344333 2 378889999999999999999988753 2466777777643100 00
Q ss_pred CcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeC
Q 043192 206 EYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIM 283 (316)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~ 283 (316)
....++ |+|++||++|.+++ .+.++.+.|++.|. +++++.|+
T Consensus 144 ---------------------------------~~~~~~-pvli~hG~~D~vvp~~~~~~~~~~L~~~g~--~~~~~~~~ 187 (232)
T PRK11460 144 ---------------------------------TAPTAT-TIHLIHGGEDPVIDVAHAVAAQEALISLGG--DVTLDIVE 187 (232)
T ss_pred ---------------------------------cccCCC-cEEEEecCCCCccCHHHHHHHHHHHHHCCC--CeEEEEEC
Confidence 000122 99999999999885 77899999999998 89999999
Q ss_pred CCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 284 GETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 284 ~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
+++|.+. .+.++++.+||.+
T Consensus 188 ~~gH~i~---------~~~~~~~~~~l~~ 207 (232)
T PRK11460 188 DLGHAID---------PRLMQFALDRLRY 207 (232)
T ss_pred CCCCCCC---------HHHHHHHHHHHHH
Confidence 9999876 3444555555543
No 28
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=1.5e-17 Score=142.66 Aligned_cols=235 Identities=14% Similarity=0.195 Sum_probs=136.7
Q ss_pred eEEecC-CCceEEEEEecCCCCCCCCccEEEEEcCCc-ccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC---
Q 043192 43 DIIYSS-EHNLSARIYFPNNTNRNQKLPLVVYFHGGA-FIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV--- 117 (316)
Q Consensus 43 ~v~~~~-~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg-~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~--- 117 (316)
.+.+.. +..+...++.|.+. ..+.||++|||. +..|+.. .+..++..++ +.||.|+++|+++.+.+..
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~~----~~~~vv~i~gg~~~~~g~~~--~~~~la~~l~-~~G~~v~~~Dl~G~G~S~~~~~ 76 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGAS----HTTGVLIVVGGPQYRVGSHR--QFVLLARRLA-EAGFPVLRFDYRGMGDSEGENL 76 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCCC----CCCeEEEEeCCccccCCchh--HHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCC
Confidence 455554 34577788888754 234566667654 3334322 2334455554 4599999999998775432
Q ss_pred --CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 118 --PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 118 --~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
....+|+.++++++++..+ ..++|+++||||||.+++.++... ..++++|+++|++...
T Consensus 77 ~~~~~~~d~~~~~~~l~~~~~------------g~~~i~l~G~S~Gg~~a~~~a~~~-------~~v~~lil~~p~~~~~ 137 (274)
T TIGR03100 77 GFEGIDADIAAAIDAFREAAP------------HLRRIVAWGLCDAASAALLYAPAD-------LRVAGLVLLNPWVRTE 137 (274)
T ss_pred CHHHHHHHHHHHHHHHHhhCC------------CCCcEEEEEECHHHHHHHHHhhhC-------CCccEEEEECCccCCc
Confidence 2235788999999887531 236799999999999999987652 3599999999986432
Q ss_pred CCCCCCCCCCCcc-cccchhhhhhhCCCCCC--------------C--CCCccCCC-CC----CcccCCCCCcEEEEEcC
Q 043192 196 APIPGEPYVPEYW-TTIIDEPWQIARPDTSG--------------L--DDPIINPV-AD----PKLSSLGCNRLLVFVAQ 253 (316)
Q Consensus 196 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------~--~~~~~~~~-~~----~~~~~~~~~P~li~~G~ 253 (316)
............. .......|......... . ........ .. ..+.++.+ |+++++|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-P~ll~~g~ 216 (274)
T TIGR03100 138 AAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQG-PVLFILSG 216 (274)
T ss_pred ccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCC-cEEEEEcC
Confidence 2111100000000 00001222221111000 0 00000000 00 03446677 99999999
Q ss_pred CccccchH-------HHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 254 LDLLRGRG-------LYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 254 ~D~~~~~~-------~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.|...+.. ..+.+.+... ++++..+++++|... ..+..+++.+.|.+||++
T Consensus 217 ~D~~~~~~~~~~~~~~~~~~~l~~~----~v~~~~~~~~~H~l~----~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 217 NDLTAQEFADSVLGEPAWRGALEDP----GIERVEIDGADHTFS----DRVWREWVAARTTEWLRR 274 (274)
T ss_pred cchhHHHHHHHhccChhhHHHhhcC----CeEEEecCCCCcccc----cHHHHHHHHHHHHHHHhC
Confidence 99875422 2222333322 679999999999543 335568899999999963
No 29
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.77 E-value=9.8e-18 Score=148.37 Aligned_cols=123 Identities=28% Similarity=0.493 Sum_probs=103.5
Q ss_pred EEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHH
Q 043192 53 SARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVA 132 (316)
Q Consensus 53 ~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~ 132 (316)
.+.+|.++.+ ..+-+|+.+|||||+..+.. .+..+++.++.+.|+.++++||.++|+.+||..++.+--++.|+.
T Consensus 384 ~~~~wh~P~p---~S~sli~HcHGGGfVAqsSk--SHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~i 458 (880)
T KOG4388|consen 384 SLELWHRPAP---RSRSLIVHCHGGGFVAQSSK--SHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAI 458 (880)
T ss_pred ccccCCCCCC---CCceEEEEecCCceeeeccc--cccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHh
Confidence 4556666533 35578999999999887766 466889999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 133 SHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 133 ~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
++...+| -..+||++.|+|+||++++.++++.-..+ ...++|+++-++
T Consensus 459 nn~allG--------~TgEriv~aGDSAGgNL~~~VaLr~i~~g--vRvPDGl~laY~ 506 (880)
T KOG4388|consen 459 NNCALLG--------STGERIVLAGDSAGGNLCFTVALRAIAYG--VRVPDGLMLAYP 506 (880)
T ss_pred cCHHHhC--------cccceEEEeccCCCcceeehhHHHHHHhC--CCCCCceEEecC
Confidence 9988876 77799999999999999999999876554 245778877554
No 30
>PLN00021 chlorophyllase
Probab=99.77 E-value=1.9e-16 Score=137.27 Aligned_cols=205 Identities=19% Similarity=0.186 Sum_probs=129.6
Q ss_pred ceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC
Q 043192 39 VDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP 116 (316)
Q Consensus 39 ~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 116 (316)
+...++.+.+ ...+++.+|+|... +..|+|||+||+++. .. .|...+..+++ +||.|+++|++......
T Consensus 24 ~~~~~~~~~~~~~~~~p~~v~~P~~~---g~~PvVv~lHG~~~~---~~--~y~~l~~~Las-~G~~VvapD~~g~~~~~ 94 (313)
T PLN00021 24 VELITVDESSRPSPPKPLLVATPSEA---GTYPVLLFLHGYLLY---NS--FYSQLLQHIAS-HGFIVVAPQLYTLAGPD 94 (313)
T ss_pred eEEEEecCCCcCCCCceEEEEeCCCC---CCCCEEEEECCCCCC---cc--cHHHHHHHHHh-CCCEEEEecCCCcCCCC
Confidence 3344444433 24789999999754 678999999997642 22 35555666654 59999999977543223
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 117 VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 117 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
.....+|..++++|+.+....+...+ ...|.++++|+||||||.+|+.++.+.++..+ ..+++++++++|+.....
T Consensus 95 ~~~~i~d~~~~~~~l~~~l~~~l~~~---~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~-~~~v~ali~ldPv~g~~~ 170 (313)
T PLN00021 95 GTDEIKDAAAVINWLSSGLAAVLPEG---VRPDLSKLALAGHSRGGKTAFALALGKAAVSL-PLKFSALIGLDPVDGTSK 170 (313)
T ss_pred chhhHHHHHHHHHHHHhhhhhhcccc---cccChhheEEEEECcchHHHHHHHhhcccccc-ccceeeEEeecccccccc
Confidence 34456788888999987543221000 13677899999999999999999998764321 246899999999764321
Q ss_pred CCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcc-----c----c---chHHHH
Q 043192 197 PIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDL-----L----R---GRGLYY 264 (316)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~-----~----~---~~~~~~ 264 (316)
..... +.+..... ...++.. |+|+++++.|. + . ....+|
T Consensus 171 ~~~~~---------------------------p~il~~~~-~s~~~~~-P~liig~g~~~~~~~~~~p~~ap~~~~~~~f 221 (313)
T PLN00021 171 GKQTP---------------------------PPVLTYAP-HSFNLDI-PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEF 221 (313)
T ss_pred ccCCC---------------------------CcccccCc-ccccCCC-CeEEEecCCCcccccccccccCCCCCCHHHH
Confidence 11000 00000000 1122334 99999999763 1 1 123556
Q ss_pred HHHHHhCCCCcccEEEEeCCCccccc
Q 043192 265 VTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 265 ~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
++.++. +....+.++++|.-.
T Consensus 222 ~~~~~~-----~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 222 FNECKA-----PAVHFVAKDYGHMDM 242 (313)
T ss_pred HHhcCC-----CeeeeeecCCCccee
Confidence 666543 678888899999655
No 31
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.77 E-value=2.7e-17 Score=127.29 Aligned_cols=143 Identities=23% Similarity=0.284 Sum_probs=105.5
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCC
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYAD 149 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d 149 (316)
+||++||++. +.. .+..+...++++ ||.|+.+|+++.+.. ....++..+++++.... .+
T Consensus 1 ~vv~~HG~~~---~~~--~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~ 59 (145)
T PF12695_consen 1 VVVLLHGWGG---SRR--DYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY------------PD 59 (145)
T ss_dssp EEEEECTTTT---TTH--HHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH------------CT
T ss_pred CEEEECCCCC---CHH--HHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc------------CC
Confidence 5899999764 332 466777777666 999999999987654 44456777777765432 47
Q ss_pred CccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCC
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDP 229 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
.++|+|+|||+||.+++.++.+. ..++++|+++|+.+ ..
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~~-------~~v~~~v~~~~~~~------~~---------------------------- 98 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAARN-------PRVKAVVLLSPYPD------SE---------------------------- 98 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHS-------TTESEEEEESESSG------CH----------------------------
T ss_pred CCcEEEEEEccCcHHHHHHhhhc-------cceeEEEEecCccc------hh----------------------------
Confidence 79999999999999999999874 35999999999411 00
Q ss_pred ccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccc
Q 043192 230 IINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHV 288 (316)
Q Consensus 230 ~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~ 288 (316)
.+.+... |+++++|++|.+++ ..+++++++. . +.+++.++|++|+
T Consensus 99 --------~~~~~~~-pv~~i~g~~D~~~~~~~~~~~~~~~~---~--~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 --------DLAKIRI-PVLFIHGENDPLVPPEQVRRLYEALP---G--PKELYIIPGAGHF 145 (145)
T ss_dssp --------HHTTTTS-EEEEEEETT-SSSHHHHHHHHHHHHC---S--SEEEEEETTS-TT
T ss_pred --------hhhccCC-cEEEEEECCCCcCCHHHHHHHHHHcC---C--CcEEEEeCCCcCc
Confidence 3344444 99999999999884 5666667766 2 7899999999994
No 32
>PLN02511 hydrolase
Probab=99.76 E-value=6.6e-17 Score=145.20 Aligned_cols=154 Identities=14% Similarity=0.108 Sum_probs=97.2
Q ss_pred ccCceeecccCccCCCCCCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHH
Q 043192 16 QDGHVHRLVGEEIIPASLDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNT 95 (316)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~ 95 (316)
.+|++........-+ .+......+.+...+++.+.++++.+.........|+||++||.+ |+.....+..++..
T Consensus 51 ~n~h~qT~~~~~~~~---~~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~---g~s~~~y~~~~~~~ 124 (388)
T PLN02511 51 GNRHVETIFASFFRS---LPAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT---GGSDDSYVRHMLLR 124 (388)
T ss_pred CCccHHHhhHHHhcC---CCCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCC---CCCCCHHHHHHHHH
Confidence 467776655332211 111122334455555666666666543221124568999999954 33321112334444
Q ss_pred HHHhcCcEEEeecCCCCCCCCC-------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHH
Q 043192 96 LVSHAKIIAVSVDYRRAPEDPV-------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHM 168 (316)
Q Consensus 96 l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 168 (316)
+. +.||.|+++|+|+++.... ....+|+..+++++.... ...+++++||||||++++.+
T Consensus 125 ~~-~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~-------------~~~~~~lvG~SlGg~i~~~y 190 (388)
T PLN02511 125 AR-SKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY-------------PSANLYAAGWSLGANILVNY 190 (388)
T ss_pred HH-HCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC-------------CCCCEEEEEechhHHHHHHH
Confidence 44 4599999999998875532 244789999999998752 33689999999999999999
Q ss_pred HHHhhcccccCCccceeEEeccccc
Q 043192 169 GIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 169 a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
+.+.++. ..+++++++++..+
T Consensus 191 l~~~~~~----~~v~~~v~is~p~~ 211 (388)
T PLN02511 191 LGEEGEN----CPLSGAVSLCNPFD 211 (388)
T ss_pred HHhcCCC----CCceEEEEECCCcC
Confidence 9987652 23788887776543
No 33
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=4.1e-17 Score=134.73 Aligned_cols=181 Identities=13% Similarity=0.045 Sum_probs=110.3
Q ss_pred EEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-------------CCcch
Q 043192 55 RIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-------------VPAAH 121 (316)
Q Consensus 55 ~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------------~~~~~ 121 (316)
.+|+|++. ++++|+||++||+++...+.. .... ...++.+.|+.|++||+++..... .....
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~--~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYV--IDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEV 76 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHh--hhcC-hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccH
Confidence 68999876 467899999999775322111 0012 356677789999999998753211 11235
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE 201 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 201 (316)
.|+...++++.+.. .+|++||+|+|+||||.+++.++.++++ .+++++.+++...........
T Consensus 77 ~~~~~~i~~~~~~~-----------~id~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~~~~~g~~~~~~~~~~~ 139 (212)
T TIGR01840 77 ESLHQLIDAVKANY-----------SIDPNRVYVTGLSAGGGMTAVLGCTYPD------VFAGGASNAGLPYGEASSSIS 139 (212)
T ss_pred HHHHHHHHHHHHhc-----------CcChhheEEEEECHHHHHHHHHHHhCch------hheEEEeecCCcccccccchh
Confidence 67778888887753 3889999999999999999999998744 588888888754221110000
Q ss_pred CCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcccc--chHHHHHHHHHhC
Q 043192 202 PYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLR--GRGLYYVTKLKES 271 (316)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~ 271 (316)
............. |...... .........| |++|+||++|.++ +.++.+.+++++.
T Consensus 140 ~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~p--~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 140 ATPQMCTAATAAS-VCRLVRG-----------MQSEYNGPTP--IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred hHhhcCCCCCHHH-HHHHHhc-----------cCCcccCCCC--eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0000000000011 1111000 0000111122 6889999999988 4778888888875
No 34
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=1.7e-16 Score=138.35 Aligned_cols=238 Identities=13% Similarity=0.145 Sum_probs=133.1
Q ss_pred eeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc
Q 043192 40 DSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA 119 (316)
Q Consensus 40 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~ 119 (316)
..+.+.+++.++....+++..... ...|.||++||.+ ++.. .|..++..|.+ .||.|+++|.|+.+.+..+.
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~--~~~~~lvliHG~~---~~~~--~w~~~~~~L~~-~gy~vi~~Dl~G~G~S~~~~ 91 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGP--ADGPPVLLLHGEP---SWSY--LYRKMIPILAA-AGHRVIAPDLIGFGRSDKPT 91 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCC--CCCCEEEEECCCC---Cchh--hHHHHHHHHHh-CCCEEEEECCCCCCCCCCCC
Confidence 345677776555555555543221 1347899999954 2222 46666666644 49999999999887654322
Q ss_pred -----chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 120 -----AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 120 -----~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
..++....+..+.++ .+.++++|+||||||.+|+.++.++++ ++++++++++....
T Consensus 92 ~~~~~~~~~~a~~l~~~l~~-------------l~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~ 152 (302)
T PRK00870 92 RREDYTYARHVEWMRSWFEQ-------------LDLTDVTLVCQDWGGLIGLRLAAEHPD------RFARLVVANTGLPT 152 (302)
T ss_pred CcccCCHHHHHHHHHHHHHH-------------cCCCCEEEEEEChHHHHHHHHHHhChh------heeEEEEeCCCCCC
Confidence 123322222222222 334689999999999999999998754 69999999874321
Q ss_pred CCC--------CCCCC-CCC----------CcccccchhhhhhhCCCCC-----C--CCCCcc---CC---CC-C-----
Q 043192 195 SAP--------IPGEP-YVP----------EYWTTIIDEPWQIARPDTS-----G--LDDPII---NP---VA-D----- 236 (316)
Q Consensus 195 ~~~--------~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~-----~--~~~~~~---~~---~~-~----- 236 (316)
... +.... ... .............+..... . ...... .+ .. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
T PRK00870 153 GDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAW 232 (302)
T ss_pred ccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHH
Confidence 110 00000 000 0000000011111100000 0 000000 00 00 0
Q ss_pred CcccCCCCCcEEEEEcCCccccc-hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 237 PKLSSLGCNRLLVFVAQLDLLRG-RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 237 ~~~~~~~~~P~li~~G~~D~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
..+.++.+ |+++++|++|.+++ ..+.+.+.+.... .++++.+++++|.... +..+++.+.+.+||++|
T Consensus 233 ~~l~~i~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-----e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDK-PFLTAFSDSDPITGGGDAILQKRIPGAA---GQPHPTIKGAGHFLQE-----DSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCC-ceEEEecCCCCcccCchHHHHhhccccc---ccceeeecCCCccchh-----hChHHHHHHHHHHHhcC
Confidence 13467778 99999999999875 2344444444211 2347899999996553 55589999999999876
No 35
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.75 E-value=4.1e-16 Score=135.41 Aligned_cols=233 Identities=15% Similarity=0.102 Sum_probs=131.9
Q ss_pred CCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC
Q 043192 37 THVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP 116 (316)
Q Consensus 37 ~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 116 (316)
+.+..+.++++ +..+.+.. .+. ..|.||++||.+ ++.. .|..++..+..+ +.|+++|.++.+.++
T Consensus 6 ~~~~~~~~~~~---~~~i~y~~-~G~----~~~~vlllHG~~---~~~~--~w~~~~~~L~~~--~~vi~~DlpG~G~S~ 70 (294)
T PLN02824 6 PQVETRTWRWK---GYNIRYQR-AGT----SGPALVLVHGFG---GNAD--HWRKNTPVLAKS--HRVYAIDLLGYGYSD 70 (294)
T ss_pred CCCCCceEEEc---CeEEEEEE-cCC----CCCeEEEECCCC---CChh--HHHHHHHHHHhC--CeEEEEcCCCCCCCC
Confidence 34455666665 33332222 221 237899999954 2332 566777777554 699999999987665
Q ss_pred CC----------cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeE
Q 043192 117 VP----------AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGIC 186 (316)
Q Consensus 117 ~~----------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i 186 (316)
.+ ..++|....+.-+.++ ...++++|+||||||.+++.++.++++ +++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~a~~l~~~l~~-------------l~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~li 131 (294)
T PLN02824 71 KPNPRSAPPNSFYTFETWGEQLNDFCSD-------------VVGDPAFVICNSVGGVVGLQAAVDAPE------LVRGVM 131 (294)
T ss_pred CCccccccccccCCHHHHHHHHHHHHHH-------------hcCCCeEEEEeCHHHHHHHHHHHhChh------heeEEE
Confidence 33 2234433333333333 224789999999999999999999854 699999
Q ss_pred EecccccCCCCCCCCCCCCC----c----c--------------cccchhhhhhhCCCCCCCCC----------------
Q 043192 187 LLFPYFWGSAPIPGEPYVPE----Y----W--------------TTIIDEPWQIARPDTSGLDD---------------- 228 (316)
Q Consensus 187 ~~~p~~~~~~~~~~~~~~~~----~----~--------------~~~~~~~~~~~~~~~~~~~~---------------- 228 (316)
++++................ + . .......+...........+
T Consensus 132 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (294)
T PLN02824 132 LINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAV 211 (294)
T ss_pred EECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHH
Confidence 99875422110000000000 0 0 00000000000000000000
Q ss_pred -C---cc--C--CCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHH
Q 043192 229 -P---II--N--PVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAI 300 (316)
Q Consensus 229 -~---~~--~--~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 300 (316)
. .. . +.....+.++.+ |+|+++|++|.+++... .+.+.+... ..+++.+++++|.... +..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G~~D~~~~~~~--~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~ 281 (294)
T PLN02824 212 DVFLDFISYSGGPLPEELLPAVKC-PVLIAWGEKDPWEPVEL--GRAYANFDA--VEDFIVLPGVGHCPQD-----EAPE 281 (294)
T ss_pred HHHHHHhccccccchHHHHhhcCC-CeEEEEecCCCCCChHH--HHHHHhcCC--ccceEEeCCCCCChhh-----hCHH
Confidence 0 00 0 000113567777 99999999999875321 223333322 5789999999995553 5668
Q ss_pred HHHHHHHHHHhcC
Q 043192 301 RMLKTTVDFIHGK 313 (316)
Q Consensus 301 ~~~~~i~~fl~~~ 313 (316)
++.+.+.+||++|
T Consensus 282 ~~~~~i~~fl~~~ 294 (294)
T PLN02824 282 LVNPLIESFVARH 294 (294)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999875
No 36
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.74 E-value=2.3e-16 Score=135.96 Aligned_cols=210 Identities=19% Similarity=0.210 Sum_probs=117.4
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-----chhhHHHHHHHHHHhcCCCCCcc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-----AHEDSWTALKWVASHANGRGPED 142 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~ 142 (316)
.|.||++||.+.... .+..+...+..++.+ ||.|+++|+|+.+.+..+. ...........+. .
T Consensus 30 ~~~ivllHG~~~~~~--~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~-~-------- 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG--GWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD-A-------- 97 (282)
T ss_pred CCeEEEECCCCCchh--hHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHH-H--------
Confidence 367999999552111 111122334455444 8999999999887665331 1111222222332 2
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC-C----------CCCc----
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP-Y----------VPEY---- 207 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~----------~~~~---- 207 (316)
.+.++++++||||||.+++.++.++++ +++++++++|............ . ....
T Consensus 98 -----l~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (282)
T TIGR03343 98 -----LDIEKAHLVGNSMGGATALNFALEYPD------RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLK 166 (282)
T ss_pred -----cCCCCeeEEEECchHHHHHHHHHhChH------hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHH
Confidence 445799999999999999999998754 5899999987532111000000 0 0000
Q ss_pred ------------cccc-chhhhhhhCCCCCC----CCCCccCCCC----CCcccCCCCCcEEEEEcCCccccc--hHHHH
Q 043192 208 ------------WTTI-IDEPWQIARPDTSG----LDDPIINPVA----DPKLSSLGCNRLLVFVAQLDLLRG--RGLYY 264 (316)
Q Consensus 208 ------------~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~P~li~~G~~D~~~~--~~~~~ 264 (316)
.... ....|......... .......+.. ...+.++.+ |+|+++|++|.+++ .++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlli~G~~D~~v~~~~~~~~ 245 (282)
T TIGR03343 167 QMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKA-KTLVTWGRDDRFVPLDHGLKL 245 (282)
T ss_pred HHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCC-CEEEEEccCCCcCCchhHHHH
Confidence 0000 00000000000000 0000000000 014567778 99999999999874 44555
Q ss_pred HHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 265 VTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 265 ~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++.+. +++++.+++++|.... +..+.+.+.+.+||++
T Consensus 246 ~~~~~------~~~~~~i~~agH~~~~-----e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 246 LWNMP------DAQLHVFSRCGHWAQW-----EHADAFNRLVIDFLRN 282 (282)
T ss_pred HHhCC------CCEEEEeCCCCcCCcc-----cCHHHHHHHHHHHhhC
Confidence 55443 6899999999996553 4557889999999863
No 37
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.74 E-value=7.2e-17 Score=133.63 Aligned_cols=112 Identities=19% Similarity=0.243 Sum_probs=80.8
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGL 226 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (316)
.++++||+|+|+|+||.+|+.++++.+. .+.+++++|+++........
T Consensus 101 ~i~~~ri~l~GFSQGa~~al~~~l~~p~------~~~gvv~lsG~~~~~~~~~~-------------------------- 148 (216)
T PF02230_consen 101 GIDPSRIFLGGFSQGAAMALYLALRYPE------PLAGVVALSGYLPPESELED-------------------------- 148 (216)
T ss_dssp T--GGGEEEEEETHHHHHHHHHHHCTSS------TSSEEEEES---TTGCCCHC--------------------------
T ss_pred CCChhheehhhhhhHHHHHHHHHHHcCc------CcCEEEEeeccccccccccc--------------------------
Confidence 3899999999999999999999998744 69999999998743221100
Q ss_pred CCCccCCCCCCcccCC-CCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHH
Q 043192 227 DDPIINPVADPKLSSL-GCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRML 303 (316)
Q Consensus 227 ~~~~~~~~~~~~~~~~-~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 303 (316)
..... .+ |++++||++|.+++ .++...+.|++.+. ++++..|+|.+|... .+.+
T Consensus 149 -----------~~~~~~~~-pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~--~v~~~~~~g~gH~i~---------~~~~ 205 (216)
T PF02230_consen 149 -----------RPEALAKT-PILIIHGDEDPVVPFEWAEKTAEFLKAAGA--NVEFHEYPGGGHEIS---------PEEL 205 (216)
T ss_dssp -----------CHCCCCTS--EEEEEETT-SSSTHHHHHHHHHHHHCTT---GEEEEEETT-SSS-----------HHHH
T ss_pred -----------cccccCCC-cEEEEecCCCCcccHHHHHHHHHHHHhcCC--CEEEEEcCCCCCCCC---------HHHH
Confidence 00111 22 99999999999885 68899999999998 899999999999665 5788
Q ss_pred HHHHHHHhcC
Q 043192 304 KTTVDFIHGK 313 (316)
Q Consensus 304 ~~i~~fl~~~ 313 (316)
+++.+||+++
T Consensus 206 ~~~~~~l~~~ 215 (216)
T PF02230_consen 206 RDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 8899999864
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.73 E-value=2.5e-16 Score=138.44 Aligned_cols=152 Identities=16% Similarity=0.215 Sum_probs=95.0
Q ss_pred ccCceeecccCccCCCCCCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHH
Q 043192 16 QDGHVHRLVGEEIIPASLDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNT 95 (316)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~ 95 (316)
.++++......-..+. +......+.++.++++.+.++....+.. ....|+||++||.+ |+........++..
T Consensus 11 ~~~h~qt~~~~~~~~~---~~~~~~~~~~~~~dg~~~~l~w~~~~~~--~~~~p~vll~HG~~---g~~~~~~~~~~~~~ 82 (324)
T PRK10985 11 SNPHLQTLLPRLIRRK---VLFTPYWQRLELPDGDFVDLAWSEDPAQ--ARHKPRLVLFHGLE---GSFNSPYAHGLLEA 82 (324)
T ss_pred CCCcHHHhhHHHhcCC---CCCCcceeEEECCCCCEEEEecCCCCcc--CCCCCEEEEeCCCC---CCCcCHHHHHHHHH
Confidence 5777776653332221 1112233445556555454543222111 34579999999954 33222123345555
Q ss_pred HHHhcCcEEEeecCCCCCCCCC-------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHH
Q 043192 96 LVSHAKIIAVSVDYRRAPEDPV-------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHM 168 (316)
Q Consensus 96 l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 168 (316)
+ .+.||.|+++|+|+++..+. ....+|+..+++++++. ....+++++||||||.+++.+
T Consensus 83 l-~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~-------------~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 83 A-QKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQRE-------------FGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred H-HHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHh-------------CCCCCEEEEEecchHHHHHHH
Confidence 5 45699999999998754321 12468999999999876 234689999999999998888
Q ss_pred HHHhhcccccCCccceeEEeccccc
Q 043192 169 GIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 169 a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
+.+...+ ..+++++++++.++
T Consensus 149 ~~~~~~~----~~~~~~v~i~~p~~ 169 (324)
T PRK10985 149 LAKEGDD----LPLDAAVIVSAPLM 169 (324)
T ss_pred HHhhCCC----CCccEEEEEcCCCC
Confidence 8876432 24788888887654
No 39
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.71 E-value=6.9e-16 Score=135.89 Aligned_cols=248 Identities=14% Similarity=0.122 Sum_probs=132.5
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchh-----------------hh----HHHHHHHHHhcCcEEEee
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSL-----------------TY----HAYMNTLVSHAKIIAVSV 107 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~-----------------~~----~~~~~~l~~~~g~~v~~~ 107 (316)
+..+....|.|+ .++.+|+++||-+...+..... .| ..++..|.++ ||.|+++
T Consensus 7 g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~~~ 80 (332)
T TIGR01607 7 GLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVYGL 80 (332)
T ss_pred CCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEEEe
Confidence 345677778775 2557999999966544321000 11 2456666554 9999999
Q ss_pred cCCCCCCCC-----------CCcchhhHHHHHHHHHHhcCCCCCccc-----cc--ccCCCccEEEEeechHHHHHHHHH
Q 043192 108 DYRRAPEDP-----------VPAAHEDSWTALKWVASHANGRGPEDW-----LK--TYADFQKVILSGDSAGGNIAHHMG 169 (316)
Q Consensus 108 d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~-----~~--~~~d~~~i~l~G~S~GG~~a~~~a 169 (316)
|.|+++.+. +...++|+...++.+++.....+...+ .- ..-+..+++|+||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999876433 222245566666555442100000000 00 001135799999999999999998
Q ss_pred HHhhccc--ccCCccceeEEecccccCCCCCCCCCCC-CCcccccchhhhhhhCCC----------------CCCCCCCc
Q 043192 170 IRQGQEK--LEGINIDGICLLFPYFWGSAPIPGEPYV-PEYWTTIIDEPWQIARPD----------------TSGLDDPI 230 (316)
Q Consensus 170 ~~~~~~~--~~~~~~~~~i~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 230 (316)
.+.+... .....++|+|+.+|.+............ .......+ .....+.+. .....|++
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~ 239 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVM-NFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKF 239 (332)
T ss_pred HHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHH-HHHHHHCCcccccCccccccChhhhhHHhcCcc
Confidence 7654321 0012589999999986432110000000 00000000 000000000 00111222
Q ss_pred cC-CCCC---------------CcccCC--CCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 231 IN-PVAD---------------PKLSSL--GCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 231 ~~-~~~~---------------~~~~~~--~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
.. .... ..+..+ .+ |+|+++|++|.+++ .+..+++++... ++++++|+++.|...
T Consensus 240 ~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~-P~Lii~G~~D~vv~~~~~~~~~~~~~~~----~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 240 RYDGGITFNLASELIKATDTLDCDIDYIPKDI-PILFIHSKGDCVCSYEGTVSFYNKLSIS----NKELHTLEDMDHVIT 314 (332)
T ss_pred ccCCcccHHHHHHHHHHHHHHHhhHhhCCCCC-CEEEEEeCCCCccCHHHHHHHHHhccCC----CcEEEEECCCCCCCc
Confidence 11 0000 022334 34 99999999999885 445454444321 578999999999777
Q ss_pred ccCCCcHHHHHHHHHHHHHHhc
Q 043192 291 LLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 291 ~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.. .+.+++++.+.+||+.
T Consensus 315 ~E----~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 315 IE----PGNEEVLKKIIEWISN 332 (332)
T ss_pred cC----CCHHHHHHHHHHHhhC
Confidence 43 2357899999999963
No 40
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.71 E-value=2.8e-15 Score=127.27 Aligned_cols=211 Identities=13% Similarity=0.031 Sum_probs=116.8
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcc--hhhH-HHHHHHHHHhcCCCCCcc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA--HEDS-WTALKWVASHANGRGPED 142 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~--~~d~-~~~~~~l~~~~~~~~~~~ 142 (316)
...|.||++||.+ ++.. .|..++..+.. +|.|+.+|.|+.+.+..+.. +.+. .++..++..
T Consensus 14 ~~~~~iv~lhG~~---~~~~--~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~--------- 77 (255)
T PRK10673 14 HNNSPIVLVHGLF---GSLD--NLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA--------- 77 (255)
T ss_pred CCCCCEEEECCCC---Cchh--HHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 4568899999954 3333 46666666643 69999999998765543222 2221 222222221
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC---------CCCCcccccch
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP---------YVPEYWTTIID 213 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~---------~~~~~~~~~~~ 213 (316)
++.++++|+||||||.+|+.++.+.++ .+++++++++............ ...........
T Consensus 78 -----l~~~~~~lvGhS~Gg~va~~~a~~~~~------~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (255)
T PRK10673 78 -----LQIEKATFIGHSMGGKAVMALTALAPD------RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAA 146 (255)
T ss_pred -----cCCCceEEEEECHHHHHHHHHHHhCHh------hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHH
Confidence 234679999999999999999988744 5999998753211100000000 00000000000
Q ss_pred hhhhhhCC---------CCCCCCCC---------ccCCC-CCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCC
Q 043192 214 EPWQIARP---------DTSGLDDP---------IINPV-ADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWK 274 (316)
Q Consensus 214 ~~~~~~~~---------~~~~~~~~---------~~~~~-~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~ 274 (316)
..+..... ........ ..... ....++++.+ |+|+++|++|..+.. ...+.+.+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~G~~D~~~~~--~~~~~~~~~~~- 222 (255)
T PRK10673 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPH-PALFIRGGNSPYVTE--AYRDDLLAQFP- 222 (255)
T ss_pred HHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCC-CeEEEECCCCCCCCH--HHHHHHHHhCC-
Confidence 00000000 00000000 00000 0013455667 999999999997752 22333333332
Q ss_pred cccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 275 GDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 275 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+++++++++++|.... +..+++.+.+.+||+++
T Consensus 223 -~~~~~~~~~~gH~~~~-----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 223 -QARAHVIAGAGHWVHA-----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred -CcEEEEeCCCCCeeec-----cCHHHHHHHHHHHHhcC
Confidence 7899999999995553 44578999999999864
No 41
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.71 E-value=2.4e-15 Score=129.29 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=71.2
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC------cchhhHHHHHHHHHHhcCCCCC
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP------AAHEDSWTALKWVASHANGRGP 140 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~~ 140 (316)
..|.||++||++. +.. .++.....++.+.||.|+++|+|+.+.+..+ ..+++....+..+.+.
T Consensus 24 ~~~~vl~~hG~~g---~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (288)
T TIGR01250 24 EKIKLLLLHGGPG---MSH--EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK------ 92 (288)
T ss_pred CCCeEEEEcCCCC---ccH--HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH------
Confidence 3478999999642 222 3445566666766999999999987665433 1234444444444443
Q ss_pred cccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 141 EDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 141 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+.++++|+||||||.+++.++..++ ..++++++.++..
T Consensus 93 -------~~~~~~~liG~S~Gg~ia~~~a~~~p------~~v~~lvl~~~~~ 131 (288)
T TIGR01250 93 -------LGLDKFYLLGHSWGGMLAQEYALKYG------QHLKGLIISSMLD 131 (288)
T ss_pred -------cCCCcEEEEEeehHHHHHHHHHHhCc------cccceeeEecccc
Confidence 34467999999999999999999874 3589999887754
No 42
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.70 E-value=9.9e-16 Score=131.77 Aligned_cols=207 Identities=14% Similarity=0.102 Sum_probs=119.3
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc---chhhHHHHHHHHHHhcCCCCCccccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA---AHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
+.||++||.+ ++.. .|..++..+. + +|.|+++|+|+.+.+..+. ..++....+.-+.+.
T Consensus 26 ~plvllHG~~---~~~~--~w~~~~~~L~-~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~----------- 87 (276)
T TIGR02240 26 TPLLIFNGIG---ANLE--LVFPFIEALD-P-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY----------- 87 (276)
T ss_pred CcEEEEeCCC---cchH--HHHHHHHHhc-c-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-----------
Confidence 5799999944 2332 4666666653 3 6999999999887664332 233333333333332
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCC--CCCC---CCCC-Ccccc-----cch-
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAP--IPGE---PYVP-EYWTT-----IID- 213 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~--~~~~---~~~~-~~~~~-----~~~- 213 (316)
.+.++++|+||||||.+|+.+|.++++ .+++++++++....... .... .... ..... ...
T Consensus 88 --l~~~~~~LvG~S~GG~va~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (276)
T TIGR02240 88 --LDYGQVNAIGVSWGGALAQQFAHDYPE------RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPD 159 (276)
T ss_pred --hCcCceEEEEECHHHHHHHHHHHHCHH------HhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhh
Confidence 334689999999999999999998754 59999999876532100 0000 0000 00000 000
Q ss_pred ----------hhhhhhCCCCCCCCC-Cc-------cCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCC
Q 043192 214 ----------EPWQIARPDTSGLDD-PI-------INPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGW 273 (316)
Q Consensus 214 ----------~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~ 273 (316)
.....+......... .. ........+.++.+ |+|+++|++|.+++ ..+++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~v~~~~~~~l~~~~~---- 234 (276)
T TIGR02240 160 IYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ-PTLVLAGDDDPIIPLINMRLLAWRIP---- 234 (276)
T ss_pred hccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC-CEEEEEeCCCCcCCHHHHHHHHHhCC----
Confidence 000000000000000 00 00000013567778 99999999999885 3454554442
Q ss_pred CcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 274 KGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 274 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
..+++.+++ +|.... +..+++.+.+.+|+++..
T Consensus 235 --~~~~~~i~~-gH~~~~-----e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 235 --NAELHIIDD-GHLFLI-----TRAEAVAPIIMKFLAEER 267 (276)
T ss_pred --CCEEEEEcC-CCchhh-----ccHHHHHHHHHHHHHHhh
Confidence 568888886 995543 556889999999998753
No 43
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.70 E-value=1.3e-15 Score=128.98 Aligned_cols=208 Identities=13% Similarity=0.189 Sum_probs=117.2
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----cchhhHHHHHHHHHHhcCCCCCcc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP----AAHEDSWTALKWVASHANGRGPED 142 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~ 142 (316)
..|+||++||.+ ++.. .|..++..+ .+ +|.|+++|+|+.+.+..+ ...+|....+..+.+.
T Consensus 12 ~~~~iv~lhG~~---~~~~--~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~-------- 76 (257)
T TIGR03611 12 DAPVVVLSSGLG---GSGS--YWAPQLDVL-TQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA-------- 76 (257)
T ss_pred CCCEEEEEcCCC---cchh--HHHHHHHHH-Hh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH--------
Confidence 468999999955 3332 344555444 44 799999999987655322 1233333322222222
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC----------CCCCCccccc-
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE----------PYVPEYWTTI- 211 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~----------~~~~~~~~~~- 211 (316)
.+..+++|+||||||.+|+.++.+.++ .++++|+++++.......... ..........
T Consensus 77 -----~~~~~~~l~G~S~Gg~~a~~~a~~~~~------~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (257)
T TIGR03611 77 -----LNIERFHFVGHALGGLIGLQLALRYPE------RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQA 145 (257)
T ss_pred -----hCCCcEEEEEechhHHHHHHHHHHChH------HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhh
Confidence 345789999999999999999988644 589999988765321100000 0000000000
Q ss_pred ---chhhhhh-hCCCC--------C--CCCCCc------cCCC-CCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHH
Q 043192 212 ---IDEPWQI-ARPDT--------S--GLDDPI------INPV-ADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKL 268 (316)
Q Consensus 212 ---~~~~~~~-~~~~~--------~--~~~~~~------~~~~-~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l 268 (316)
....|.. ..... . ...... .... ....+.++.+ |+++++|++|.+++ ...++++.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~ 224 (257)
T TIGR03611 146 LFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQH-PVLLIANRDDMLVPYTQSLRLAAAL 224 (257)
T ss_pred hhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCc-cEEEEecCcCcccCHHHHHHHHHhc
Confidence 0000000 00000 0 000000 0000 0014556667 99999999999885 344444443
Q ss_pred HhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 269 KESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
. +.+++.+++++|.+.. ++.+++.+.+.+||++
T Consensus 225 ~------~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 225 P------NAQLKLLPYGGHASNV-----TDPETFNRALLDFLKT 257 (257)
T ss_pred C------CceEEEECCCCCCccc-----cCHHHHHHHHHHHhcC
Confidence 2 5788899999996553 4567899999999864
No 44
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.70 E-value=2.3e-15 Score=129.19 Aligned_cols=205 Identities=14% Similarity=0.106 Sum_probs=117.9
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----cchhhHHHHHHHHHHhcCCCCCccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP----AAHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
.|+||++||.+ ++.. .|..++..+.. +|.|+++|+|+.+.+..+ ..+++....+..+.+.
T Consensus 28 ~~~vv~~hG~~---~~~~--~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~--------- 91 (278)
T TIGR03056 28 GPLLLLLHGTG---ASTH--SWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA--------- 91 (278)
T ss_pred CCeEEEEcCCC---CCHH--HHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH---------
Confidence 47899999954 3322 46677766643 699999999988755432 2344444444444433
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC----CC----CCcccc-----
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP----YV----PEYWTT----- 210 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~----~~----~~~~~~----- 210 (316)
.+.++++|+||||||.+++.++.+.++ ++++++++++............ .. ......
T Consensus 92 ----~~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 92 ----EGLSPDGVIGHSAGAAIALRLALDGPV------TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred ----cCCCCceEEEECccHHHHHHHHHhCCc------ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh
Confidence 233678999999999999999988743 5888888877543211100000 00 000000
Q ss_pred -cchhhhhhhCCCC---CC------------CC-----------CCccCCCCCCcccCCCCCcEEEEEcCCccccc--hH
Q 043192 211 -IIDEPWQIARPDT---SG------------LD-----------DPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RG 261 (316)
Q Consensus 211 -~~~~~~~~~~~~~---~~------------~~-----------~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~ 261 (316)
.....+..+.... .. .. ........ ..+.++.+ |+++++|++|.+++ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~-P~lii~g~~D~~vp~~~~ 239 (278)
T TIGR03056 162 AADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLN-RDLPRITI-PLHLIAGEEDKAVPPDES 239 (278)
T ss_pred cccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchh-hhcccCCC-CEEEEEeCCCcccCHHHH
Confidence 0000000000000 00 00 00000011 14556777 99999999999885 33
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 262 LYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 262 ~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
+.+.+.+. +++++.+++++|.+.. +..+++.+.|.+||+
T Consensus 240 ~~~~~~~~------~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 240 KRAATRVP------TATLHVVPGGGHLVHE-----EQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHhcc------CCeEEEECCCCCcccc-----cCHHHHHHHHHHHhC
Confidence 44433332 6789999999996663 445789999999984
No 45
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=1.1e-15 Score=137.12 Aligned_cols=229 Identities=17% Similarity=0.088 Sum_probs=156.2
Q ss_pred cCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHH-HHHHHHHhcCcEEEeecCCCCCCCC--C------
Q 043192 47 SSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHA-YMNTLVSHAKIIAVSVDYRRAPEDP--V------ 117 (316)
Q Consensus 47 ~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~l~~~~g~~v~~~d~r~~~~~~--~------ 117 (316)
+++..+.+-+|.|.+.++.+++|+|+++.||....-..++..+-. +--..++..||.|+.+|-|++-... |
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~ 700 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKK 700 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhh
Confidence 456678888999999888889999999999997654433222211 1122334459999999999874322 2
Q ss_pred ---CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 118 ---PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 118 ---~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
...++|....++||.++.. .+|.+||+|-|+|.||.+++..+.++++ -++++|+=+|+.+-
T Consensus 701 kmGqVE~eDQVeglq~Laeq~g----------fidmdrV~vhGWSYGGYLSlm~L~~~P~------IfrvAIAGapVT~W 764 (867)
T KOG2281|consen 701 KMGQVEVEDQVEGLQMLAEQTG----------FIDMDRVGVHGWSYGGYLSLMGLAQYPN------IFRVAIAGAPVTDW 764 (867)
T ss_pred ccCeeeehhhHHHHHHHHHhcC----------cccchheeEeccccccHHHHHHhhcCcc------eeeEEeccCcceee
Confidence 2336788899999988753 4999999999999999999999999855 58888887776642
Q ss_pred CCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCC-ccCCCCCCcccCCCCC--cEEEEEcCCcccc--chHHHHHHHHH
Q 043192 195 SAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDP-IINPVADPKLSSLGCN--RLLVFVAQLDLLR--GRGLYYVTKLK 269 (316)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--P~li~~G~~D~~~--~~~~~~~~~l~ 269 (316)
.... ..+ .++|.+-.....+. ..+.+.. ...++|.. -+|++||--|..+ -+...+..+|-
T Consensus 765 ~~YD-TgY-------------TERYMg~P~~nE~gY~agSV~~-~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lv 829 (867)
T KOG2281|consen 765 RLYD-TGY-------------TERYMGYPDNNEHGYGAGSVAG-HVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALV 829 (867)
T ss_pred eeec-ccc-------------hhhhcCCCccchhcccchhHHH-HHhhCCCCCceEEEEecccccchhhhhHHHHHHHHH
Confidence 2111 110 01111110001011 1111111 23333321 5999999999987 47788999999
Q ss_pred hCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 270 ESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 270 ~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++|. +.++.+||+..|+... .+.....-..++.||++
T Consensus 830 kagK--pyeL~IfP~ERHsiR~----~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 830 KAGK--PYELQIFPNERHSIRN----PESGIYYEARLLHFLQE 866 (867)
T ss_pred hCCC--ceEEEEccccccccCC----CccchhHHHHHHHHHhh
Confidence 9999 8999999999998773 24456666789999986
No 46
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.69 E-value=1.8e-15 Score=127.01 Aligned_cols=209 Identities=16% Similarity=0.150 Sum_probs=118.1
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc--chhhHHHHHHH-HHHhcCCCCCccccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA--AHEDSWTALKW-VASHANGRGPEDWLK 145 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~--~~~d~~~~~~~-l~~~~~~~~~~~~~~ 145 (316)
|+||++||.+ ++.. .|..++..++ .|+.|+.+|+++.+.+..+. ...+..+.+++ +.....
T Consensus 2 ~~vv~~hG~~---~~~~--~~~~~~~~L~--~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--------- 65 (251)
T TIGR03695 2 PVLVFLHGFL---GSGA--DWQALIELLG--PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLD--------- 65 (251)
T ss_pred CEEEEEcCCC---Cchh--hHHHHHHHhc--ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHH---------
Confidence 7899999954 3333 4667777675 48999999999877654322 22333344433 222111
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC---CCC----CCcccccchhhhhh
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE---PYV----PEYWTTIIDEPWQI 218 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~ 218 (316)
..+.++++|+|||+||.+++.++.+.++ .+++++++++........... ... ..+...........
T Consensus 66 -~~~~~~~~l~G~S~Gg~ia~~~a~~~~~------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (251)
T TIGR03695 66 -QLGIEPFFLVGYSMGGRIALYYALQYPE------RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDD 138 (251)
T ss_pred -HcCCCeEEEEEeccHHHHHHHHHHhCch------heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHH
Confidence 1445789999999999999999998744 589999988764322110000 000 00000000000000
Q ss_pred hCCCC-------CC------------CCCC----------c--cCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHH
Q 043192 219 ARPDT-------SG------------LDDP----------I--INPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTK 267 (316)
Q Consensus 219 ~~~~~-------~~------------~~~~----------~--~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~ 267 (316)
+.... .. .... . ..+.....+.++.+ |+++++|++|..+.. ..+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~---~~~~ 214 (251)
T TIGR03695 139 WYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTI-PVLYLCGEKDEKFVQ---IAKE 214 (251)
T ss_pred HhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCC-ceEEEeeCcchHHHH---HHHH
Confidence 00000 00 0000 0 00000013456677 999999999986532 2334
Q ss_pred HHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 268 LKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 268 l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
+.+... +++++.+++++|..... ..+++.+.+.+||+
T Consensus 215 ~~~~~~--~~~~~~~~~~gH~~~~e-----~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 215 MQKLLP--NLTLVIIANAGHNIHLE-----NPEAFAKILLAFLE 251 (251)
T ss_pred HHhcCC--CCcEEEEcCCCCCcCcc-----ChHHHHHHHHHHhC
Confidence 444333 78999999999976643 34788888888874
No 47
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.68 E-value=7.5e-16 Score=120.98 Aligned_cols=228 Identities=15% Similarity=0.121 Sum_probs=153.2
Q ss_pred CCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC
Q 043192 37 THVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP 116 (316)
Q Consensus 37 ~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 116 (316)
....++.++..+.+.+.++-|.-.+. ...|+++++|+.+...|.. -..++-+..+.++.|+.++||+.+.+.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E---~S~pTlLyfh~NAGNmGhr-----~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSE---SSRPTLLYFHANAGNMGHR-----LPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeeccc---CCCceEEEEccCCCcccch-----hhHHHHHHHHcCceEEEEEeeccccCC
Confidence 35667777777777777776665532 4789999999955443332 245566777789999999999876543
Q ss_pred C----CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 117 V----PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 117 ~----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
. ....-|.+++++||.... ..|..+++|.|.|.||.+|+.+|.+..+ ++.|+|+-..+.
T Consensus 122 GspsE~GL~lDs~avldyl~t~~-----------~~dktkivlfGrSlGGAvai~lask~~~------ri~~~ivENTF~ 184 (300)
T KOG4391|consen 122 GSPSEEGLKLDSEAVLDYLMTRP-----------DLDKTKIVLFGRSLGGAVAIHLASKNSD------RISAIIVENTFL 184 (300)
T ss_pred CCccccceeccHHHHHHHHhcCc-----------cCCcceEEEEecccCCeeEEEeeccchh------heeeeeeechhc
Confidence 2 233579999999999876 4889999999999999999999988644 689999877766
Q ss_pred cCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHh
Q 043192 193 WGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKE 270 (316)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~ 270 (316)
.......... .+........++-.+...... .+.+-.. |+|++.|..|.+++ +.+.+++.+.+
T Consensus 185 SIp~~~i~~v------~p~~~k~i~~lc~kn~~~S~~--------ki~~~~~-P~LFiSGlkDelVPP~~Mr~Ly~~c~S 249 (300)
T KOG4391|consen 185 SIPHMAIPLV------FPFPMKYIPLLCYKNKWLSYR--------KIGQCRM-PFLFISGLKDELVPPVMMRQLYELCPS 249 (300)
T ss_pred cchhhhhhee------ccchhhHHHHHHHHhhhcchh--------hhccccC-ceEEeecCccccCCcHHHHHHHHhCch
Confidence 4422211110 111111111111111000001 2233333 99999999999995 56666666654
Q ss_pred CCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 271 SGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 271 ~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
. ..++..+|++.|.-.... +-.++.+.+||.+.+
T Consensus 250 ~----~Krl~eFP~gtHNDT~i~------dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 250 R----TKRLAEFPDGTHNDTWIC------DGYFQAIEDFLAEVV 283 (300)
T ss_pred h----hhhheeCCCCccCceEEe------ccHHHHHHHHHHHhc
Confidence 4 579999999999765332 567888889998765
No 48
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.68 E-value=7.2e-17 Score=142.28 Aligned_cols=131 Identities=28% Similarity=0.369 Sum_probs=104.1
Q ss_pred cCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-----------
Q 043192 47 SSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED----------- 115 (316)
Q Consensus 47 ~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~----------- 115 (316)
.+++.+.++||.|.. +..++|||||||||+|..|+.....++. ..|+++.+++|++++||++.-.
T Consensus 75 ~sEDCL~LNIwaP~~--~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 75 GSEDCLYLNIWAPEV--PAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred ccccceeEEeeccCC--CCCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccc
Confidence 346789999999992 2467899999999999999987533333 5677775599999999976310
Q ss_pred --CCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 116 --PVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 116 --~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
.-...+.|+..+++|++++.+.+| .|++.|.|+|+|+||+.++.++.-..- +..++.+|+.||...
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FG--------GDp~NVTl~GeSAGa~si~~Lla~P~A----kGLF~rAi~~Sg~~~ 218 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFG--------GDPQNVTLFGESAGAASILTLLAVPSA----KGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhC--------CCccceEEeeccchHHHHHHhhcCccc----hHHHHHHHHhCCCCC
Confidence 112468999999999999999997 999999999999999999988765333 235888888888764
No 49
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.68 E-value=1.2e-14 Score=131.20 Aligned_cols=100 Identities=19% Similarity=0.313 Sum_probs=68.2
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcc-h---hhHH-----HHHHHHHHhcC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA-H---EDSW-----TALKWVASHAN 136 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~-~---~d~~-----~~~~~l~~~~~ 136 (316)
+..|+||++||.+. +.. .|...+..+.+ +|.|+++|+|+.+.+..+.. . .+.. ...+|+..
T Consensus 103 ~~~p~vvllHG~~~---~~~--~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 172 (402)
T PLN02894 103 EDAPTLVMVHGYGA---SQG--FFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA--- 172 (402)
T ss_pred CCCCEEEEECCCCc---chh--HHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---
Confidence 35689999999653 222 35556666643 59999999998876543321 1 1111 11223322
Q ss_pred CCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 137 GRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 137 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+.++++|+||||||.+|+.++.++++ .++++|+++|..
T Consensus 173 -----------l~~~~~~lvGhS~GG~la~~~a~~~p~------~v~~lvl~~p~~ 211 (402)
T PLN02894 173 -----------KNLSNFILLGHSFGGYVAAKYALKHPE------HVQHLILVGPAG 211 (402)
T ss_pred -----------cCCCCeEEEEECHHHHHHHHHHHhCch------hhcEEEEECCcc
Confidence 345689999999999999999998744 599999998754
No 50
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.68 E-value=6.9e-16 Score=129.71 Aligned_cols=207 Identities=15% Similarity=0.148 Sum_probs=115.9
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc---chhhHHHHHHHHHHhcCCCCCccc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA---AHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
..|+||++||.|. +.. .|..++..+ .+ ||.|+++|+++.+.+..+. ...+..+.+..+.+.
T Consensus 12 ~~~~li~~hg~~~---~~~--~~~~~~~~l-~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~--------- 75 (251)
T TIGR02427 12 GAPVLVFINSLGT---DLR--MWDPVLPAL-TP-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH--------- 75 (251)
T ss_pred CCCeEEEEcCccc---chh--hHHHHHHHh-hc-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 5689999999542 222 455666555 33 8999999999887654332 234433333333333
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC--CCCC--CCCcccccchhhhhhh
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP--GEPY--VPEYWTTIIDEPWQIA 219 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~ 219 (316)
.+.++++|+|||+||.+++.++.+.++ .+++++++++......... .... ...............+
T Consensus 76 ----~~~~~v~liG~S~Gg~~a~~~a~~~p~------~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR02427 76 ----LGIERAVFCGLSLGGLIAQGLAARRPD------RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERW 145 (251)
T ss_pred ----hCCCceEEEEeCchHHHHHHHHHHCHH------HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHH
Confidence 345789999999999999999988644 5888888876432211000 0000 0000000000000000
Q ss_pred CCCCCCCCC--------------C---------ccCCC-CCCcccCCCCCcEEEEEcCCccccch--HHHHHHHHHhCCC
Q 043192 220 RPDTSGLDD--------------P---------IINPV-ADPKLSSLGCNRLLVFVAQLDLLRGR--GLYYVTKLKESGW 273 (316)
Q Consensus 220 ~~~~~~~~~--------------~---------~~~~~-~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~g~ 273 (316)
......... . ..... ....+.++.+ |+++++|++|.+++. ...+.+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pvlii~g~~D~~~~~~~~~~~~~~~~---- 220 (251)
T TIGR02427 146 FTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAV-PTLCIAGDQDGSTPPELVREIADLVP---- 220 (251)
T ss_pred cccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCC-CeEEEEeccCCcCChHHHHHHHHhCC----
Confidence 000000000 0 00000 0013556677 999999999998853 333333332
Q ss_pred CcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 274 KGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 274 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
+.+++.+++++|.... +..+++.+.+.+||+
T Consensus 221 --~~~~~~~~~~gH~~~~-----~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 221 --GARFAEIRGAGHIPCV-----EQPEAFNAALRDFLR 251 (251)
T ss_pred --CceEEEECCCCCcccc-----cChHHHHHHHHHHhC
Confidence 5789999999996664 334788888888874
No 51
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.67 E-value=2.5e-15 Score=130.52 Aligned_cols=209 Identities=11% Similarity=0.103 Sum_probs=120.1
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc---chhhHHHHHHHHHHhcCCCCCcccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA---AHEDSWTALKWVASHANGRGPEDWL 144 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~ 144 (316)
.|.||++||.+ ++.. .|..++..|+++ +.|+++|.|+.+.++.+. ..++....+..+.+.
T Consensus 27 g~~vvllHG~~---~~~~--~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~---------- 89 (295)
T PRK03592 27 GDPIVFLHGNP---TSSY--LWRNIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA---------- 89 (295)
T ss_pred CCEEEEECCCC---CCHH--HHHHHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----------
Confidence 36899999954 3332 566777777554 499999999887665433 223322222222222
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC----------CCCCccccc---
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP----------YVPEYWTTI--- 211 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~----------~~~~~~~~~--- 211 (316)
.+.++++|+||||||.+|+.++.++++ ++++++++++...... ..... .........
T Consensus 90 ---l~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (295)
T PRK03592 90 ---LGLDDVVLVGHDWGSALGFDWAARHPD------RVRGIAFMEAIVRPMT-WDDFPPAVRELFQALRSPGEGEEMVLE 159 (295)
T ss_pred ---hCCCCeEEEEECHHHHHHHHHHHhChh------heeEEEEECCCCCCcc-hhhcchhHHHHHHHHhCcccccccccc
Confidence 334789999999999999999999854 6999999997432110 00000 000000000
Q ss_pred chhhhhhhCCC-------------------CCCCCCCc------cCC---------C---CCCcccCCCCCcEEEEEcCC
Q 043192 212 IDEPWQIARPD-------------------TSGLDDPI------INP---------V---ADPKLSSLGCNRLLVFVAQL 254 (316)
Q Consensus 212 ~~~~~~~~~~~-------------------~~~~~~~~------~~~---------~---~~~~~~~~~~~P~li~~G~~ 254 (316)
........... ........ ... . ....+.++.+ |+|+++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~ 238 (295)
T PRK03592 160 ENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV-PKLLINAEP 238 (295)
T ss_pred hhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC-CeEEEeccC
Confidence 00000000000 00000000 000 0 0013456777 999999999
Q ss_pred cccc-c-hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 255 DLLR-G-RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 255 D~~~-~-~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
|..+ . ...++...+.. +.+++++++++|.... +..+++.+.+.+||+++.
T Consensus 239 D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~-----e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 239 GAILTTGAIRDWCRSWPN-----QLEITVFGAGLHFAQE-----DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred CcccCcHHHHHHHHHhhh-----hcceeeccCcchhhhh-----cCHHHHHHHHHHHHHHhc
Confidence 9987 3 33344333322 5789999999996664 445889999999998765
No 52
>PLN02965 Probable pheophorbidase
Probab=99.67 E-value=9.3e-15 Score=124.25 Aligned_cols=206 Identities=13% Similarity=0.071 Sum_probs=115.4
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc----chhhHHHHHHHHHHhcCCCCCccccc
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA----AHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
.|||+||.+ .+.. .|...+..|..+ ||.|+++|+|+.+.+..+. .+++..+.+.-+.+.
T Consensus 5 ~vvllHG~~---~~~~--~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----------- 67 (255)
T PLN02965 5 HFVFVHGAS---HGAW--CWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD----------- 67 (255)
T ss_pred EEEEECCCC---CCcC--cHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh-----------
Confidence 499999965 2222 466666766544 8999999999987664322 233333323222222
Q ss_pred ccCCC-ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCC-----C----CCC--CCC----CCccc
Q 043192 146 TYADF-QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAP-----I----PGE--PYV----PEYWT 209 (316)
Q Consensus 146 ~~~d~-~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-----~----~~~--~~~----~~~~~ 209 (316)
.+. ++++|+||||||.+++.++.++++ .+++++++++....... . ... ... .....
T Consensus 68 --l~~~~~~~lvGhSmGG~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
T PLN02965 68 --LPPDHKVILVGHSIGGGSVTEALCKFTD------KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDK 139 (255)
T ss_pred --cCCCCCEEEEecCcchHHHHHHHHhCch------heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCC
Confidence 222 589999999999999999998754 58999988865211000 0 000 000 00000
Q ss_pred c----cc-hhhh-hhhCCCC-------------CCCCCCccCCC-CCCcccCCCCCcEEEEEcCCccccch--HHHHHHH
Q 043192 210 T----II-DEPW-QIARPDT-------------SGLDDPIINPV-ADPKLSSLGCNRLLVFVAQLDLLRGR--GLYYVTK 267 (316)
Q Consensus 210 ~----~~-~~~~-~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~ 267 (316)
. .. .... ..+.... ........... ....+.++.+ |+++++|++|.+++. .+.+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-P~lvi~g~~D~~~~~~~~~~~~~~ 218 (255)
T PLN02965 140 PPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKV-PRVYIKTAKDNLFDPVRQDVMVEN 218 (255)
T ss_pred CcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCC-CEEEEEcCCCCCCCHHHHHHHHHh
Confidence 0 00 0111 1111100 00000000000 0013345677 999999999998853 3444333
Q ss_pred HHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 268 LKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 268 l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
+. +++++++++++|.... ++.+++.+.+.+|+++
T Consensus 219 ~~------~a~~~~i~~~GH~~~~-----e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 219 WP------PAQTYVLEDSDHSAFF-----SVPTTLFQYLLQAVSS 252 (255)
T ss_pred CC------cceEEEecCCCCchhh-----cCHHHHHHHHHHHHHH
Confidence 32 6789999999996664 4457777777777765
No 53
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.67 E-value=2.3e-16 Score=148.29 Aligned_cols=131 Identities=30% Similarity=0.415 Sum_probs=96.8
Q ss_pred CCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC-------CCC--C-C
Q 043192 48 SEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA-------PED--P-V 117 (316)
Q Consensus 48 ~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-------~~~--~-~ 117 (316)
+++-+.++||.|.......++||+|||||||+..|+.....+. ...++.+.+++||.++||++ ++. . .
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~--~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYD--GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGH--THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCccccccc--ccccccCCCEEEEEecccccccccccccccccCch
Confidence 5678999999999885445799999999999999987321222 23455667999999999964 121 2 5
Q ss_pred CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 118 PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 118 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
...+.|...|++|++++...+| .|+++|.|+|+|+||..+..++..... ...++++|+.|+..
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FG--------GDp~~VTl~G~SAGa~sv~~~l~sp~~----~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFG--------GDPDNVTLFGQSAGAASVSLLLLSPSS----KGLFHRAILQSGSA 245 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGT--------EEEEEEEEEEETHHHHHHHHHHHGGGG----TTSBSEEEEES--T
T ss_pred hhhhhhhHHHHHHHHhhhhhcc--------cCCcceeeeeecccccccceeeecccc----cccccccccccccc
Confidence 6678999999999999999997 999999999999999999999887443 34699999999844
No 54
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.66 E-value=1e-14 Score=112.80 Aligned_cols=195 Identities=19% Similarity=0.210 Sum_probs=131.0
Q ss_pred eeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC--CCCCC-
Q 043192 42 KDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP--EDPVP- 118 (316)
Q Consensus 42 ~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~--~~~~~- 118 (316)
.+|.++.-.+.--..|.|.+. ...|+.|.+|.=.-..|+.... ....+.+.+.+.|+.++.+|||+-+ +..|.
T Consensus 5 ~~v~i~Gp~G~le~~~~~~~~---~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~ 80 (210)
T COG2945 5 PTVIINGPAGRLEGRYEPAKT---PAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN 80 (210)
T ss_pred CcEEecCCcccceeccCCCCC---CCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC
Confidence 345555322222234555543 5678999999855555555543 3344566777789999999999643 23343
Q ss_pred --cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 119 --AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 119 --~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
...+|+.++++|++++.+ +.....|+|+|+|+.+++.++.+.++ ....|.++|.++..+
T Consensus 81 GiGE~~Da~aaldW~~~~hp------------~s~~~~l~GfSFGa~Ia~~la~r~~e-------~~~~is~~p~~~~~d 141 (210)
T COG2945 81 GIGELEDAAAALDWLQARHP------------DSASCWLAGFSFGAYIAMQLAMRRPE-------ILVFISILPPINAYD 141 (210)
T ss_pred CcchHHHHHHHHHHHHhhCC------------CchhhhhcccchHHHHHHHHHHhccc-------ccceeeccCCCCchh
Confidence 347999999999999853 33446889999999999999998754 566777777664111
Q ss_pred CCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhC-CCCc
Q 043192 197 PIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKES-GWKG 275 (316)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~-g~~~ 275 (316)
. . .+.--|+ |.++++|+.|.+++... +|+.. +.
T Consensus 142 f-------------------------------s--------~l~P~P~-~~lvi~g~~Ddvv~l~~----~l~~~~~~-- 175 (210)
T COG2945 142 F-------------------------------S--------FLAPCPS-PGLVIQGDADDVVDLVA----VLKWQESI-- 175 (210)
T ss_pred h-------------------------------h--------hccCCCC-CceeEecChhhhhcHHH----HHHhhcCC--
Confidence 0 0 1222344 99999999997776444 33222 23
Q ss_pred ccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 276 DAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 276 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
+.+++.+++++|.|. .+...+.+.+.+||.
T Consensus 176 ~~~~i~i~~a~HFF~------gKl~~l~~~i~~~l~ 205 (210)
T COG2945 176 KITVITIPGADHFFH------GKLIELRDTIADFLE 205 (210)
T ss_pred CCceEEecCCCceec------ccHHHHHHHHHHHhh
Confidence 789999999999777 334677778888885
No 55
>COG0400 Predicted esterase [General function prediction only]
Probab=99.66 E-value=3.5e-15 Score=120.55 Aligned_cols=175 Identities=19% Similarity=0.181 Sum_probs=119.1
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC-----------CCCCCC--cchhhHHHHHHHHH
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA-----------PEDPVP--AAHEDSWTALKWVA 132 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-----------~~~~~~--~~~~d~~~~~~~l~ 132 (316)
...|+||++||-| ++.. .+.++...++- .+.++++.-+.. +...|. ....+.....+++.
T Consensus 16 p~~~~iilLHG~G---gde~--~~~~~~~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 16 PAAPLLILLHGLG---GDEL--DLVPLPELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCcEEEEEecCC---CChh--hhhhhhhhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 4578999999955 4432 23343333333 355665542211 112222 11234445556666
Q ss_pred HhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccc
Q 043192 133 SHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTII 212 (316)
Q Consensus 133 ~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 212 (316)
+...+.| ++.+|+++.|+|.||++++.+.++.+. .++++++++|..-.....
T Consensus 89 ~~~~~~g--------i~~~~ii~~GfSqGA~ial~~~l~~~~------~~~~ail~~g~~~~~~~~-------------- 140 (207)
T COG0400 89 ELAEEYG--------IDSSRIILIGFSQGANIALSLGLTLPG------LFAGAILFSGMLPLEPEL-------------- 140 (207)
T ss_pred HHHHHhC--------CChhheEEEecChHHHHHHHHHHhCch------hhccchhcCCcCCCCCcc--------------
Confidence 6655554 999999999999999999999999844 699999999987432210
Q ss_pred hhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 213 DEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
...+...|+|++||++|++++ .+.++.+.|++.|. ++++..++ .+|...
T Consensus 141 --------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~--~v~~~~~~-~GH~i~ 191 (207)
T COG0400 141 --------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGA--DVEVRWHE-GGHEIP 191 (207)
T ss_pred --------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC--CEEEEEec-CCCcCC
Confidence 000111189999999999885 78899999999999 99999999 699666
Q ss_pred ccCCCcHHHHHHHHHHHHHHhcC
Q 043192 291 LLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 291 ~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.+.++.+.+|+.+.
T Consensus 192 ---------~e~~~~~~~wl~~~ 205 (207)
T COG0400 192 ---------PEELEAARSWLANT 205 (207)
T ss_pred ---------HHHHHHHHHHHHhc
Confidence 56677777788764
No 56
>PRK06489 hypothetical protein; Provisional
Probab=99.66 E-value=3.1e-15 Score=133.51 Aligned_cols=132 Identities=15% Similarity=0.195 Sum_probs=79.4
Q ss_pred CCCceeeeEEecCCCceE-EEEEecCCCCCC-----CCccEEEEEcCCcccccCcchhhhH--HHHHHHH------HhcC
Q 043192 36 TTHVDSKDIIYSSEHNLS-ARIYFPNNTNRN-----QKLPLVVYFHGGAFIFENAFSLTYH--AYMNTLV------SHAK 101 (316)
Q Consensus 36 ~~~~~~~~v~~~~~~~~~-~~~~~P~~~~~~-----~~~p~vv~iHGgg~~~g~~~~~~~~--~~~~~l~------~~~g 101 (316)
......++..+.+|..+. +.+++-...+.+ ...|.||++||++. +.. .|+ .+...+. ...+
T Consensus 31 ~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~---~~~--~~~~~~~~~~l~~~~~~l~~~~ 105 (360)
T PRK06489 31 EGDWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGG---SGK--SFLSPTFAGELFGPGQPLDASK 105 (360)
T ss_pred cCceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCC---chh--hhccchhHHHhcCCCCcccccC
Confidence 334556677777654332 344443221100 01578999999653 222 222 3333331 1247
Q ss_pred cEEEeecCCCCCCCCCCc----------chhhHHH-HHHHHHHhcCCCCCcccccccCCCccEE-EEeechHHHHHHHHH
Q 043192 102 IIAVSVDYRRAPEDPVPA----------AHEDSWT-ALKWVASHANGRGPEDWLKTYADFQKVI-LSGDSAGGNIAHHMG 169 (316)
Q Consensus 102 ~~v~~~d~r~~~~~~~~~----------~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~-l~G~S~GG~~a~~~a 169 (316)
|.|+++|+|+++.+..+. .+++..+ .+.++.+. .+.+++. |+||||||.+|+.++
T Consensus 106 ~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~-------------lgi~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 106 YFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEG-------------LGVKHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred CEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHh-------------cCCCceeEEEEECHHHHHHHHHH
Confidence 999999999887654321 2344432 23334343 3346774 899999999999999
Q ss_pred HHhhcccccCCccceeEEeccc
Q 043192 170 IRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 170 ~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
.++++ +++++|++++.
T Consensus 173 ~~~P~------~V~~LVLi~s~ 188 (360)
T PRK06489 173 EKYPD------FMDALMPMASQ 188 (360)
T ss_pred HhCch------hhheeeeeccC
Confidence 99855 69999988764
No 57
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.65 E-value=3.8e-16 Score=145.25 Aligned_cols=131 Identities=27% Similarity=0.375 Sum_probs=103.7
Q ss_pred cCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC-cEEEeecCCCCCC---------CC
Q 043192 47 SSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK-IIAVSVDYRRAPE---------DP 116 (316)
Q Consensus 47 ~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g-~~v~~~d~r~~~~---------~~ 116 (316)
.+++.+.+++|.|......+++|||||||||||..|+.... ....++.+.+ ++|++++||+++. ..
T Consensus 74 ~sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~ 149 (493)
T cd00312 74 GSEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELP 149 (493)
T ss_pred CCCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCC
Confidence 35678999999998653346789999999999999987632 2244555554 9999999997542 12
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 117 VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 117 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
....+.|+..+++|++++...+| .|+++|.|+|+|+||+++..++..... +..++++|++|+...
T Consensus 150 ~n~g~~D~~~al~wv~~~i~~fg--------gd~~~v~~~G~SaG~~~~~~~~~~~~~----~~lf~~~i~~sg~~~ 214 (493)
T cd00312 150 GNYGLKDQRLALKWVQDNIAAFG--------GDPDSVTIFGESAGGASVSLLLLSPDS----KGLFHRAISQSGSAL 214 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHhC--------CCcceEEEEeecHHHHHhhhHhhCcch----hHHHHHHhhhcCCcc
Confidence 34468999999999999998886 999999999999999999998876433 235899999887654
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.65 E-value=2e-14 Score=116.24 Aligned_cols=178 Identities=14% Similarity=0.114 Sum_probs=103.9
Q ss_pred cEEEEEcCCcccccCcchhhhH-HHHHHHHHh--cCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYH-AYMNTLVSH--AKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~-~~~~~l~~~--~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
|.||++||-+ ++.. .+. ..+..++.+ .++.|+.+|.++.+ ++....+..+.++
T Consensus 2 p~illlHGf~---ss~~--~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~----------- 57 (190)
T PRK11071 2 STLLYLHGFN---SSPR--SAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLE----------- 57 (190)
T ss_pred CeEEEECCCC---CCcc--hHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHH-----------
Confidence 6799999943 3433 233 233344443 37999999988653 3455555555544
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC---CCCCcc--cccchhhhhhhC
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP---YVPEYW--TTIIDEPWQIAR 220 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~ 220 (316)
.+.++++++|+||||.+|+.++.+++ ..+++++|..+......... ...... ............
T Consensus 58 --~~~~~~~lvG~S~Gg~~a~~~a~~~~---------~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 126 (190)
T PRK11071 58 --HGGDPLGLVGSSLGGYYATWLSQCFM---------LPAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLK 126 (190)
T ss_pred --cCCCCeEEEEECHHHHHHHHHHHHcC---------CCEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHH
Confidence 23468999999999999999999863 13577888665211110000 000000 000001111000
Q ss_pred CCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHH
Q 043192 221 PDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLH 298 (316)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~ 298 (316)
. .. .. .+. .++ |++++||++|.+++ .+.++++ .++.+.++|++|.|..+
T Consensus 127 ~---------~~-~~--~i~-~~~-~v~iihg~~De~V~~~~a~~~~~---------~~~~~~~~ggdH~f~~~------ 177 (190)
T PRK11071 127 V---------MQ-ID--PLE-SPD-LIWLLQQTGDEVLDYRQAVAYYA---------ACRQTVEEGGNHAFVGF------ 177 (190)
T ss_pred h---------cC-Cc--cCC-Chh-hEEEEEeCCCCcCCHHHHHHHHH---------hcceEEECCCCcchhhH------
Confidence 0 00 00 222 455 89999999999996 4444444 23566789999988632
Q ss_pred HHHHHHHHHHHHh
Q 043192 299 AIRMLKTTVDFIH 311 (316)
Q Consensus 299 ~~~~~~~i~~fl~ 311 (316)
+++++.+.+||.
T Consensus 178 -~~~~~~i~~fl~ 189 (190)
T PRK11071 178 -ERYFNQIVDFLG 189 (190)
T ss_pred -HHhHHHHHHHhc
Confidence 678888999875
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.65 E-value=1.8e-14 Score=128.10 Aligned_cols=131 Identities=11% Similarity=0.137 Sum_probs=86.1
Q ss_pred ceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCC---cccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC
Q 043192 39 VDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGG---AFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED 115 (316)
Q Consensus 39 ~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGg---g~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~ 115 (316)
.....|.+. .+.+.+..|.|.... ...+.||++||- ++..... .+..++..+++ .||.|+++|+++.+..
T Consensus 36 ~~~~~~v~~-~~~~~l~~~~~~~~~--~~~~pvl~v~~~~~~~~~~d~~---~~~~~~~~L~~-~G~~V~~~D~~g~g~s 108 (350)
T TIGR01836 36 VTPKEVVYR-EDKVVLYRYTPVKDN--THKTPLLIVYALVNRPYMLDLQ---EDRSLVRGLLE-RGQDVYLIDWGYPDRA 108 (350)
T ss_pred CCCCceEEE-cCcEEEEEecCCCCc--CCCCcEEEeccccccceeccCC---CCchHHHHHHH-CCCeEEEEeCCCCCHH
Confidence 334455555 336777778776431 223348899972 2211111 23466666655 5999999999976543
Q ss_pred CCCcc----h-hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 116 PVPAA----H-EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 116 ~~~~~----~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
..... . +|+.++++++.+. .+..+++++||||||.+++.++...++ ++++++++++
T Consensus 109 ~~~~~~~d~~~~~~~~~v~~l~~~-------------~~~~~i~lvGhS~GG~i~~~~~~~~~~------~v~~lv~~~~ 169 (350)
T TIGR01836 109 DRYLTLDDYINGYIDKCVDYICRT-------------SKLDQISLLGICQGGTFSLCYAALYPD------KIKNLVTMVT 169 (350)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHH-------------hCCCcccEEEECHHHHHHHHHHHhCch------heeeEEEecc
Confidence 22222 2 3467778888876 344789999999999999999887643 5899999998
Q ss_pred cccCC
Q 043192 191 YFWGS 195 (316)
Q Consensus 191 ~~~~~ 195 (316)
.++..
T Consensus 170 p~~~~ 174 (350)
T TIGR01836 170 PVDFE 174 (350)
T ss_pred ccccC
Confidence 77653
No 60
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.65 E-value=2.9e-14 Score=127.18 Aligned_cols=212 Identities=13% Similarity=0.080 Sum_probs=121.0
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc----chhhHHH-HHHHHHHhcCCCCCcc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA----AHEDSWT-ALKWVASHANGRGPED 142 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~-~~~~l~~~~~~~~~~~ 142 (316)
.|.||++||.+ ++.. .|..++..+. + +|.|+++|+++.+.+..+. .+++... +..++.+
T Consensus 88 gp~lvllHG~~---~~~~--~w~~~~~~L~-~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~--------- 151 (360)
T PLN02679 88 GPPVLLVHGFG---ASIP--HWRRNIGVLA-K-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE--------- 151 (360)
T ss_pred CCeEEEECCCC---CCHH--HHHHHHHHHh-c-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH---------
Confidence 47899999955 2322 5667776664 4 7999999999887654332 2233222 2333332
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHH-hhcccccCCccceeEEecccccCCCCC--CCCCC---CC-----------
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIR-QGQEKLEGINIDGICLLFPYFWGSAPI--PGEPY---VP----------- 205 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~--~~~~~---~~----------- 205 (316)
...++++|+||||||.+++.++.. ++ .+++++|++++........ ..... ..
T Consensus 152 -----l~~~~~~lvGhS~Gg~ia~~~a~~~~P------~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 152 -----VVQKPTVLIGNSVGSLACVIAASESTR------DLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred -----hcCCCeEEEEECHHHHHHHHHHHhcCh------hhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 234689999999999999988864 43 3699999998753211100 00000 00
Q ss_pred -Ccc---------cccchhhhhhhCCCCC--------------CCC---CCc---cC----CCCCCcccCCCCCcEEEEE
Q 043192 206 -EYW---------TTIIDEPWQIARPDTS--------------GLD---DPI---IN----PVADPKLSSLGCNRLLVFV 251 (316)
Q Consensus 206 -~~~---------~~~~~~~~~~~~~~~~--------------~~~---~~~---~~----~~~~~~~~~~~~~P~li~~ 251 (316)
... ...+...+........ ... +.. .. +.....+.++++ |+||++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PtLii~ 299 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISL-PILVLW 299 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCC-CEEEEE
Confidence 000 0000000000000000 000 000 00 000013556777 999999
Q ss_pred cCCccccchH---HHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 252 AQLDLLRGRG---LYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 252 G~~D~~~~~~---~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
|++|.+++.. .++.+.+.+.-. +++++++++++|... .+..+++.+.|.+||++..
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~aGH~~~-----~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGVGHCPH-----DDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCCCCCcc-----ccCHHHHHHHHHHHHHhcC
Confidence 9999987532 234445544322 789999999999544 3667899999999998743
No 61
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.64 E-value=6.3e-15 Score=124.11 Aligned_cols=205 Identities=11% Similarity=0.061 Sum_probs=115.4
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTY 147 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 147 (316)
.|.||++||.+. +.. .|..+...+ + +|.|+++|+|+.+.+..+.. .+.....+++.+....
T Consensus 2 ~p~vvllHG~~~---~~~--~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~---------- 62 (242)
T PRK11126 2 LPWLVFLHGLLG---SGQ--DWQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS---------- 62 (242)
T ss_pred CCEEEEECCCCC---ChH--HHHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH----------
Confidence 378999999552 222 466666654 3 69999999998876543322 2333333333333221
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCC------CCCCC-CCCcccccchhhhhhh-
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPI------PGEPY-VPEYWTTIIDEPWQIA- 219 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~- 219 (316)
.+.++++++||||||.+|+.++.++++. +++++++.++........ ..... ...+...........+
T Consensus 63 ~~~~~~~lvG~S~Gg~va~~~a~~~~~~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (242)
T PRK11126 63 YNILPYWLVGYSLGGRIAMYYACQGLAG-----GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWY 137 (242)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCCcc-----cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHH
Confidence 3357999999999999999999987432 489999887654221100 00000 0000000000000000
Q ss_pred ----CCCCCC---------CC--CC------------ccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCC
Q 043192 220 ----RPDTSG---------LD--DP------------IINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESG 272 (316)
Q Consensus 220 ----~~~~~~---------~~--~~------------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g 272 (316)
...... .. .. ...+.....+.++.+ |+++++|++|.++. .+.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~---~~~~~----- 208 (242)
T PRK11126 138 QQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTF-PFYYLCGERDSKFQ---ALAQQ----- 208 (242)
T ss_pred hcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCC-CeEEEEeCCcchHH---HHHHH-----
Confidence 000000 00 00 000001114567788 99999999998553 12221
Q ss_pred CCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 273 WKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 273 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
. +++++.+++++|.+.. +..+++.+.|.+||++
T Consensus 209 ~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 L--ALPLHVIPNAGHNAHR-----ENPAAFAASLAQILRL 241 (242)
T ss_pred h--cCeEEEeCCCCCchhh-----hChHHHHHHHHHHHhh
Confidence 1 5799999999996664 4458889999999874
No 62
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.64 E-value=6.9e-15 Score=123.24 Aligned_cols=203 Identities=18% Similarity=0.090 Sum_probs=117.4
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTY 147 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 147 (316)
.|.||++||.+ ++.. .|..+...+. + +|.|+.+|+|+.+.+... ...++....+.+.+.
T Consensus 4 ~~~iv~~HG~~---~~~~--~~~~~~~~l~-~-~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~------------- 62 (245)
T TIGR01738 4 NVHLVLIHGWG---MNAE--VFRCLDEELS-A-HFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQ------------- 62 (245)
T ss_pred CceEEEEcCCC---Cchh--hHHHHHHhhc-c-CeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHh-------------
Confidence 36899999954 2322 4556665554 3 699999999988765432 223555555555543
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC--CCCCCCCCCC---cc---cc----cchhh
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA--PIPGEPYVPE---YW---TT----IIDEP 215 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~~~~~---~~---~~----~~~~~ 215 (316)
. .++++++||||||.+++.++.++++ .++++|++++...... .......... +. .. ....+
T Consensus 63 ~-~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (245)
T TIGR01738 63 A-PDPAIWLGWSLGGLVALHIAATHPD------RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERF 135 (245)
T ss_pred C-CCCeEEEEEcHHHHHHHHHHHHCHH------hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 2 2689999999999999999988754 5899998876542211 1110000000 00 00 00000
Q ss_pred hh-hhCCCCCC-------------CCCC-------c---cCCCC-CCcccCCCCCcEEEEEcCCccccc--hHHHHHHHH
Q 043192 216 WQ-IARPDTSG-------------LDDP-------I---INPVA-DPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKL 268 (316)
Q Consensus 216 ~~-~~~~~~~~-------------~~~~-------~---~~~~~-~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l 268 (316)
.. ........ ...+ . ..... ...+.++++ |+++++|++|.+++ ..+.+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~~~~~~~~~~ 214 (245)
T TIGR01738 136 LALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISV-PFLRLYGYLDGLVPAKVVPYLDKLA 214 (245)
T ss_pred HHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCC-CEEEEeecCCcccCHHHHHHHHHhC
Confidence 00 00000000 0000 0 00000 014567778 99999999999885 233343333
Q ss_pred HhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHH
Q 043192 269 KESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFI 310 (316)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl 310 (316)
. +++++.+++++|.... ++.+++.+.+.+|+
T Consensus 215 ~------~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 P------HSELYIFAKAAHAPFL-----SHAEAFCALLVAFK 245 (245)
T ss_pred C------CCeEEEeCCCCCCccc-----cCHHHHHHHHHhhC
Confidence 2 6899999999996553 45688888888885
No 63
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.64 E-value=2.5e-15 Score=130.47 Aligned_cols=232 Identities=16% Similarity=0.171 Sum_probs=132.8
Q ss_pred CCCceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC
Q 043192 36 TTHVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP 113 (316)
Q Consensus 36 ~~~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~ 113 (316)
...+...+|.+.+ +..+.+.++.|++. +++.|+||.+||.|...+ .+... ..++ ..|++|+.+|.|+.+
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~-----~~~~~-~~~a-~~G~~vl~~d~rGqg 121 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSG-----DPFDL-LPWA-AAGYAVLAMDVRGQG 121 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--GG-----GHHHH-HHHH-HTT-EEEEE--TTTS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCCC-----Ccccc-cccc-cCCeEEEEecCCCCC
Confidence 4567778899987 44788899999855 478999999999764322 12222 2344 459999999998654
Q ss_pred CC------------------CCCc---------chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHH
Q 043192 114 ED------------------PVPA---------AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAH 166 (316)
Q Consensus 114 ~~------------------~~~~---------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~ 166 (316)
.. .... .+.|+..++++|.+.. .+|.+||++.|.|.||.+++
T Consensus 122 ~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slp-----------evD~~rI~v~G~SqGG~lal 190 (320)
T PF05448_consen 122 GRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLP-----------EVDGKRIGVTGGSQGGGLAL 190 (320)
T ss_dssp SSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTST-----------TEEEEEEEEEEETHHHHHHH
T ss_pred CCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCC-----------CcCcceEEEEeecCchHHHH
Confidence 11 0111 2478899999999875 48999999999999999999
Q ss_pred HHHHHhhcccccCCccceeEEecccccCCCCCCCCCC-CCCcccccchhhhhhhCCCCCCCCC-----CccCCCCCCccc
Q 043192 167 HMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPY-VPEYWTTIIDEPWQIARPDTSGLDD-----PIINPVADPKLS 240 (316)
Q Consensus 167 ~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 240 (316)
.+|.-. .+|+++++..|++.-......... ... -..+..+.+...+....... .++...+ -..
T Consensus 191 ~~aaLd-------~rv~~~~~~vP~l~d~~~~~~~~~~~~~--y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~n--fA~ 259 (320)
T PF05448_consen 191 AAAALD-------PRVKAAAADVPFLCDFRRALELRADEGP--YPEIRRYFRWRDPHHEREPEVFETLSYFDAVN--FAR 259 (320)
T ss_dssp HHHHHS-------ST-SEEEEESESSSSHHHHHHHT--STT--THHHHHHHHHHSCTHCHHHHHHHHHHTT-HHH--HGG
T ss_pred HHHHhC-------ccccEEEecCCCccchhhhhhcCCcccc--HHHHHHHHhccCCCcccHHHHHHHHhhhhHHH--HHH
Confidence 999873 469999999997642211000000 000 00000111100000000000 0011110 123
Q ss_pred CCCCCcEEEEEcCCccccchH--HHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHH-HHHHHHHHhcC
Q 043192 241 SLGCNRLLVFVAQLDLLRGRG--LYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRM-LKTTVDFIHGK 313 (316)
Q Consensus 241 ~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~-~~~i~~fl~~~ 313 (316)
.+++ |+++..|-.|.+++.+ ...++.|.. +.++.+||..+|... .+. .++.++||++|
T Consensus 260 ri~~-pvl~~~gl~D~~cPP~t~fA~yN~i~~-----~K~l~vyp~~~He~~---------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 260 RIKC-PVLFSVGLQDPVCPPSTQFAAYNAIPG-----PKELVVYPEYGHEYG---------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp G--S-EEEEEEETT-SSS-HHHHHHHHCC--S-----SEEEEEETT--SSTT---------HHHHHHHHHHHHHH-
T ss_pred HcCC-CEEEEEecCCCCCCchhHHHHHhccCC-----CeeEEeccCcCCCch---------hhHHHHHHHHHHhcC
Confidence 4566 9999999999999644 344444432 789999999999655 344 77899999876
No 64
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.64 E-value=9.7e-15 Score=130.95 Aligned_cols=208 Identities=16% Similarity=0.140 Sum_probs=118.2
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC---cchhhHHHHHHHHHHhcCCCCCccc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP---AAHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
..|.||++||.+ ++.. .|......+. + +|.|+++|+++.+..... ..+.++...+..+.+.
T Consensus 130 ~~~~vl~~HG~~---~~~~--~~~~~~~~l~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~--------- 193 (371)
T PRK14875 130 DGTPVVLIHGFG---GDLN--NWLFNHAALA-A-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA--------- 193 (371)
T ss_pred CCCeEEEECCCC---Cccc--hHHHHHHHHh-c-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---------
Confidence 457899999854 3333 4555555554 3 599999999988655322 2234444444443333
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC---CCC---C-c---------
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP---YVP---E-Y--------- 207 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~---~~~---~-~--------- 207 (316)
++..+++|+|||+||.+++.++.+.+ .+++++++++|............ ... . +
T Consensus 194 ----~~~~~~~lvG~S~Gg~~a~~~a~~~~------~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (371)
T PRK14875 194 ----LGIERAHLVGHSMGGAVALRLAARAP------QRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFA 263 (371)
T ss_pred ----cCCccEEEEeechHHHHHHHHHHhCc------hheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhc
Confidence 55678999999999999999998864 35899999887642221100000 000 0 0
Q ss_pred -----ccccchhhhhhhCCCC---------CCCCCCccCCCC-CCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCC
Q 043192 208 -----WTTIIDEPWQIARPDT---------SGLDDPIINPVA-DPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESG 272 (316)
Q Consensus 208 -----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g 272 (316)
........+....-.. ............ ...+.++++ |+|+++|++|.+++... .+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~vp~~~--~~~l~--- 337 (371)
T PRK14875 264 DPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAI-PVLVIWGEQDRIIPAAH--AQGLP--- 337 (371)
T ss_pred ChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCC-CEEEEEECCCCccCHHH--Hhhcc---
Confidence 0000000000000000 000000000000 003556777 99999999999885322 22222
Q ss_pred CCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 273 WKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 273 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
. .+++.++++++|.... +..+++.+.|.+||+++
T Consensus 338 ~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 338 D--GVAVHVLPGAGHMPQM-----EAAADVNRLLAEFLGKA 371 (371)
T ss_pred C--CCeEEEeCCCCCChhh-----hCHHHHHHHHHHHhccC
Confidence 1 5799999999996553 44578888999999864
No 65
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.62 E-value=6e-14 Score=127.69 Aligned_cols=115 Identities=14% Similarity=0.238 Sum_probs=74.7
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHH-HHHHHHH--hcCcEEEeecCCCCCCCCCC----cchhh
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHA-YMNTLVS--HAKIIAVSVDYRRAPEDPVP----AAHED 123 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~l~~--~~g~~v~~~d~r~~~~~~~~----~~~~d 123 (316)
.+++....|.+. ..+|.||++||.+ ++.. .|.. ++..+.. +.+|.|+++|+++.+.++.+ ..+++
T Consensus 187 ~l~~~~~gp~~~---~~k~~VVLlHG~~---~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 187 SLFVHVQQPKDN---KAKEDVLFIHGFI---SSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred EEEEEEecCCCC---CCCCeEEEECCCC---ccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 455555556543 3457899999965 3322 3433 2233432 34899999999987765433 12344
Q ss_pred HHHHH-HHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 124 SWTAL-KWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 124 ~~~~~-~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
....+ ..+.+. .+.++++|+||||||.+++.++.++++ +++++++++|..
T Consensus 259 ~a~~l~~~ll~~-------------lg~~k~~LVGhSmGG~iAl~~A~~~Pe------~V~~LVLi~~~~ 309 (481)
T PLN03087 259 HLEMIERSVLER-------------YKVKSFHIVAHSLGCILALALAVKHPG------AVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHHH-------------cCCCCEEEEEECHHHHHHHHHHHhChH------hccEEEEECCCc
Confidence 43333 233333 345789999999999999999998854 599999998643
No 66
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=2.4e-14 Score=123.70 Aligned_cols=99 Identities=18% Similarity=0.322 Sum_probs=72.2
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----cchhhHHHHHHHHHHhcCCCCCccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP----AAHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
.|.||++||.+ .+ ...|..++..+ .+ +|.|+++|+++.+.++.+ ..+++..+.+..+.+.
T Consensus 34 ~~~iv~lHG~~---~~--~~~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~--------- 97 (286)
T PRK03204 34 GPPILLCHGNP---TW--SFLYRDIIVAL-RD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH--------- 97 (286)
T ss_pred CCEEEEECCCC---cc--HHHHHHHHHHH-hC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH---------
Confidence 47899999954 12 12455666555 33 699999999988765433 2356677777776665
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+.++++++||||||.+++.++..+++ +++++|++++..
T Consensus 98 ----~~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~ 136 (286)
T PRK03204 98 ----LGLDRYLSMGQDWGGPISMAVAVERAD------RVRGVVLGNTWF 136 (286)
T ss_pred ----hCCCCEEEEEECccHHHHHHHHHhChh------heeEEEEECccc
Confidence 344789999999999999999988744 699999887654
No 67
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.61 E-value=2.2e-14 Score=121.98 Aligned_cols=206 Identities=17% Similarity=0.076 Sum_probs=116.4
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccC
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYA 148 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (316)
|.||++||.| ++.. .|..++..+. + .|.|+.+|+|+.+.+..+.. .+.....+.+.+.
T Consensus 14 ~~ivllHG~~---~~~~--~w~~~~~~L~-~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~~-------------- 71 (256)
T PRK10349 14 VHLVLLHGWG---LNAE--VWRCIDEELS-S-HFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQQ-------------- 71 (256)
T ss_pred CeEEEECCCC---CChh--HHHHHHHHHh-c-CCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHhc--------------
Confidence 5699999954 2322 4666666664 3 59999999998876543322 2333334444432
Q ss_pred CCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC--CCCCCCCCC--Cc---ccccchhhhhhh--
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA--PIPGEPYVP--EY---WTTIIDEPWQIA-- 219 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~~~~--~~---~~~~~~~~~~~~-- 219 (316)
..+++.|+||||||.+|+.++.++++ +++++|++++...... ......... .+ ...........+
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTHPE------RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChH------hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 23789999999999999999988744 6999999876432111 111000000 00 000000000000
Q ss_pred ---CCCCC-------------CCCCCc-----------cCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCC
Q 043192 220 ---RPDTS-------------GLDDPI-----------INPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESG 272 (316)
Q Consensus 220 ---~~~~~-------------~~~~~~-----------~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g 272 (316)
..... ....+. ........+.++.+ |+|+++|++|.+++... .+.+.+.-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~~--~~~~~~~i 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSM-PFLRLYGYLDGLVPRKV--VPMLDKLW 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCC-CeEEEecCCCccCCHHH--HHHHHHhC
Confidence 00000 000000 00001115667778 99999999999775321 22333221
Q ss_pred CCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 273 WKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 273 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
. +++++++++++|.... ++.+.+.+.+.+|-++
T Consensus 223 ~--~~~~~~i~~~gH~~~~-----e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 223 P--HSESYIFAKAAHAPFI-----SHPAEFCHLLVALKQR 255 (256)
T ss_pred C--CCeEEEeCCCCCCccc-----cCHHHHHHHHHHHhcc
Confidence 2 7899999999995553 5567888888887543
No 68
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.61 E-value=4.2e-14 Score=115.55 Aligned_cols=120 Identities=23% Similarity=0.256 Sum_probs=83.7
Q ss_pred eEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC--CCCCC----------Cc
Q 043192 52 LSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA--PEDPV----------PA 119 (316)
Q Consensus 52 ~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~----------~~ 119 (316)
+.+++|+|++.. ..+.|+||++||.+. +........-+..++++.||+|+.|+-... ...-| ..
T Consensus 1 l~Y~lYvP~~~~-~~~~PLVv~LHG~~~---~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~ 76 (220)
T PF10503_consen 1 LSYRLYVPPGAP-RGPVPLVVVLHGCGQ---SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGG 76 (220)
T ss_pred CcEEEecCCCCC-CCCCCEEEEeCCCCC---CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCcc
Confidence 457899999763 347899999999663 222111122335789999999999984421 11111 11
Q ss_pred chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 120 AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 120 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
....+...++++.++. .+|++||++.|+|+||+|+..++..+++ .|.++..+++..
T Consensus 77 d~~~i~~lv~~v~~~~-----------~iD~~RVyv~G~S~Gg~ma~~la~~~pd------~faa~a~~sG~~ 132 (220)
T PF10503_consen 77 DVAFIAALVDYVAARY-----------NIDPSRVYVTGLSNGGMMANVLACAYPD------LFAAVAVVSGVP 132 (220)
T ss_pred chhhHHHHHHhHhhhc-----------ccCCCceeeEEECHHHHHHHHHHHhCCc------cceEEEeecccc
Confidence 2334556666666553 4999999999999999999999999855 689988888764
No 69
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=1.8e-13 Score=119.32 Aligned_cols=267 Identities=15% Similarity=0.086 Sum_probs=159.6
Q ss_pred ccCceeecccCccCCCCCCCCCCceeeeEEecCCCceEEEEEecCCCC---CCCCccEEEEEcCCcccccCcchhhhHHH
Q 043192 16 QDGHVHRLVGEEIIPASLDPTTHVDSKDIIYSSEHNLSARIYFPNNTN---RNQKLPLVVYFHGGAFIFENAFSLTYHAY 92 (316)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~---~~~~~p~vv~iHGgg~~~g~~~~~~~~~~ 92 (316)
..|+++......+- ..+......+-+++++|+.+.++++.+.+.. .+...|+||++|| ..|+... .|-.-
T Consensus 73 ~~ghlQT~~~~~~~---~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpG---ltg~S~~-~YVr~ 145 (409)
T KOG1838|consen 73 FSGHLQTLLLSFFG---SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPG---LTGGSHE-SYVRH 145 (409)
T ss_pred cCCeeeeeehhhcC---CCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecC---CCCCChh-HHHHH
Confidence 46666666533332 1133344555677788888999999877652 2356899999999 3344433 45455
Q ss_pred HHHHHHhcCcEEEeecCCCCCCCCCCc-------chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHH
Q 043192 93 MNTLVSHAKIIAVSVDYRRAPEDPVPA-------AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIA 165 (316)
Q Consensus 93 ~~~l~~~~g~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 165 (316)
+...+.+.||.|++++.|++++....+ ..+|+..+++++++.. ...+++.+|.||||++.
T Consensus 146 lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~-------------P~a~l~avG~S~Gg~iL 212 (409)
T KOG1838|consen 146 LVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRY-------------PQAPLFAVGFSMGGNIL 212 (409)
T ss_pred HHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhC-------------CCCceEEEEecchHHHH
Confidence 556667779999999999876554322 2589999999999984 34689999999999999
Q ss_pred HHHHHHhhcccccCCccceeEEecccccC--CCCCCCCCCC----CCc--------------------------ccccch
Q 043192 166 HHMGIRQGQEKLEGINIDGICLLFPYFWG--SAPIPGEPYV----PEY--------------------------WTTIID 213 (316)
Q Consensus 166 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~~--~~~~~~~~~~----~~~--------------------------~~~~~~ 213 (316)
..++.+..++ .+.+.|+++.+||-.. ...+...... ..+ .....+
T Consensus 213 ~nYLGE~g~~---~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~Svr 289 (409)
T KOG1838|consen 213 TNYLGEEGDN---TPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVR 289 (409)
T ss_pred HHHhhhccCC---CCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHH
Confidence 9999987765 3456677777776422 1100000000 000 000111
Q ss_pred hhhhhhCCCC--CCCCCCcc---CCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCccc
Q 043192 214 EPWQIARPDT--SGLDDPII---NPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHV 288 (316)
Q Consensus 214 ~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~ 288 (316)
++-+.+.... ....+.++ |+.. .+.++.+ |+|.+++.+|+++....-=.+..+++. ++-+++-...||.
T Consensus 290 eFD~~~t~~~~gf~~~deYY~~aSs~~--~v~~I~V-P~L~ina~DDPv~p~~~ip~~~~~~np---~v~l~~T~~GGHl 363 (409)
T KOG1838|consen 290 EFDEALTRPMFGFKSVDEYYKKASSSN--YVDKIKV-PLLCINAADDPVVPEEAIPIDDIKSNP---NVLLVITSHGGHL 363 (409)
T ss_pred HHHhhhhhhhcCCCcHHHHHhhcchhh--hcccccc-cEEEEecCCCCCCCcccCCHHHHhcCC---cEEEEEeCCCcee
Confidence 1111111110 01111111 2222 7888888 999999999999864222233444443 5677777788896
Q ss_pred ccccCCCcHHHHHHHHH-HHHHHhc
Q 043192 289 FHLLNPSSLHAIRMLKT-TVDFIHG 312 (316)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-i~~fl~~ 312 (316)
-+... -.+....++++ +.+|+..
T Consensus 364 gfleg-~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 364 GFLEG-LWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred eeecc-CCCccchhHHHHHHHHHHH
Confidence 44322 11234455555 6666653
No 70
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.60 E-value=4.2e-14 Score=119.64 Aligned_cols=217 Identities=18% Similarity=0.221 Sum_probs=128.9
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
..++.+|+|||-|- |.. .|..-...++. ...|.++|..+.+.++-|....|-..+..|..+.. ++| |
T Consensus 88 ~~~~plVliHGyGA--g~g---~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesi-----E~W-R 154 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGA--GLG---LFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESI-----EQW-R 154 (365)
T ss_pred cCCCcEEEEeccch--hHH---HHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHH-----HHH-H
Confidence 45667899999552 222 34455566766 68899999998877766665555544444555544 223 2
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCC-CCC-CCCCCcc---------------
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPI-PGE-PYVPEYW--------------- 208 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~-~~~-~~~~~~~--------------- 208 (316)
...+.++++|+|||+||.+|..+|+++|+ +|+-+||++|+-...... ... ...+..+
T Consensus 155 ~~~~L~KmilvGHSfGGYLaa~YAlKyPe------rV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~ 228 (365)
T KOG4409|consen 155 KKMGLEKMILVGHSFGGYLAAKYALKYPE------RVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLA 228 (365)
T ss_pred HHcCCcceeEeeccchHHHHHHHHHhChH------hhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHH
Confidence 22566799999999999999999999965 699999999975433221 000 0000000
Q ss_pred -----cccchhhhhhhCCCC------CCCCCC----------------------------ccCCCCCCcccCCC--CCcE
Q 043192 209 -----TTIIDEPWQIARPDT------SGLDDP----------------------------IINPVADPKLSSLG--CNRL 247 (316)
Q Consensus 209 -----~~~~~~~~~~~~~~~------~~~~~~----------------------------~~~~~~~~~~~~~~--~~P~ 247 (316)
.+.-..+...+.+.. ....|. ...|+.. ++..+. + |+
T Consensus 229 ~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~-r~~~l~~~~-pv 306 (365)
T KOG4409|consen 229 LLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQ-RLRELKKDV-PV 306 (365)
T ss_pred HHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHH-HHHhhccCC-CE
Confidence 000000111111100 000000 0011111 233333 5 99
Q ss_pred EEEEcCCccccc-hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 248 LVFVAQLDLLRG-RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 248 li~~G~~D~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++++|++|-.=. .+.+....+... .+++++++++||.... +..+.+.+.++++++.
T Consensus 307 ~fiyG~~dWmD~~~g~~~~~~~~~~----~~~~~~v~~aGHhvyl-----Dnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 307 TFIYGDRDWMDKNAGLEVTKSLMKE----YVEIIIVPGAGHHVYL-----DNPEFFNQIVLEECDK 363 (365)
T ss_pred EEEecCcccccchhHHHHHHHhhcc----cceEEEecCCCceeec-----CCHHHHHHHHHHHHhc
Confidence 999999997653 445555554322 5899999999996664 3347888889888875
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.59 E-value=3.8e-14 Score=119.80 Aligned_cols=227 Identities=13% Similarity=0.074 Sum_probs=127.4
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-------CCcchhh
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-------VPAAHED 123 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d 123 (316)
...+.++.|.+. +++|+||++||.|....... ..+..++..|+ +.||.|+.+|||+++.+. +....+|
T Consensus 11 ~~~~~~~~p~~~---~~~~~VlllHG~g~~~~~~~-~~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~D 85 (266)
T TIGR03101 11 FRFCLYHPPVAV---GPRGVVIYLPPFAEEMNKSR-RMVALQARAFA-AGGFGVLQIDLYGCGDSAGDFAAARWDVWKED 85 (266)
T ss_pred cEEEEEecCCCC---CCceEEEEECCCcccccchh-HHHHHHHHHHH-HCCCEEEEECCCCCCCCCCccccCCHHHHHHH
Confidence 345555556543 45789999999553222111 12344455564 459999999999876542 2233578
Q ss_pred HHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCC
Q 043192 124 SWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPY 203 (316)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (316)
+..+++++++.. ..+|+|+||||||.+++.++.+++ ..++++|+++|.+.......+...
T Consensus 86 v~~ai~~L~~~~--------------~~~v~LvG~SmGG~vAl~~A~~~p------~~v~~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 86 VAAAYRWLIEQG--------------HPPVTLWGLRLGALLALDAANPLA------AKCNRLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred HHHHHHHHHhcC--------------CCCEEEEEECHHHHHHHHHHHhCc------cccceEEEeccccchHHHHHHHHH
Confidence 888888887642 368999999999999999998864 358999999998765433222100
Q ss_pred C---CCcccccch---h-hhhhhCC-CCCC-----CCCCccCCCCCCcccCC---CCCcEEEEEcCC--cc-ccchHHHH
Q 043192 204 V---PEYWTTIID---E-PWQIARP-DTSG-----LDDPIINPVADPKLSSL---GCNRLLVFVAQL--DL-LRGRGLYY 264 (316)
Q Consensus 204 ~---~~~~~~~~~---~-~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~---~~~P~li~~G~~--D~-~~~~~~~~ 264 (316)
- ......... . .-..... .... ........+...++... +. .+|++.-.. |. ......++
T Consensus 146 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 224 (266)
T TIGR03101 146 LRLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNC-PVHWFEVRPEEGATLSPVFSRL 224 (266)
T ss_pred HHHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCC-ceEEEEeccccCCCCCHHHHHH
Confidence 0 000000000 0 0000000 0000 00000000000012211 22 677776643 33 33567889
Q ss_pred HHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHH
Q 043192 265 VTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVD 308 (316)
Q Consensus 265 ~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~ 308 (316)
.+.+++.|+ .++...++|- .|+. .+...+..+.++....
T Consensus 225 ~~~~~~~g~--~v~~~~~~~~--~~~~-~~~~~~~p~~~~~~~~ 263 (266)
T TIGR03101 225 GEQWVQSGV--EVTVDLVPGP--AFWQ-TQEIEEAPELIARTTA 263 (266)
T ss_pred HHHHHHcCC--eEeeeecCCc--hhhc-chhhhHhHHHHHHHHh
Confidence 999999999 8999999986 4442 3444444455554443
No 72
>PRK07581 hypothetical protein; Validated
Probab=99.59 E-value=3.2e-14 Score=126.07 Aligned_cols=130 Identities=13% Similarity=0.107 Sum_probs=77.3
Q ss_pred CceeeeEEecCCCceE-EEEEec-CCCCCCCCccEEEEEcCCcccccCcchhhhHHHH---HHHHHhcCcEEEeecCCCC
Q 043192 38 HVDSKDIIYSSEHNLS-ARIYFP-NNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYM---NTLVSHAKIIAVSVDYRRA 112 (316)
Q Consensus 38 ~~~~~~v~~~~~~~~~-~~~~~P-~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~---~~l~~~~g~~v~~~d~r~~ 112 (316)
.+...++++.+|..+. +.+++. .+....+..|+||++||+++. .. .+...+ ..+ ...+|.|+++|+|+.
T Consensus 9 ~~~~~~~~~~~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~---~~--~~~~~~~~~~~l-~~~~~~vi~~D~~G~ 82 (339)
T PRK07581 9 TFDLGDVELQSGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGT---HQ--DNEWLIGPGRAL-DPEKYFIIIPNMFGN 82 (339)
T ss_pred EEeeCCeEecCCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCC---cc--cchhhccCCCcc-CcCceEEEEecCCCC
Confidence 3445566676665332 233322 221111234777777775542 21 111111 133 334899999999988
Q ss_pred CCCCCCc---------------chhhHHHHHHHHHHhcCCCCCcccccccCCCcc-EEEEeechHHHHHHHHHHHhhccc
Q 043192 113 PEDPVPA---------------AHEDSWTALKWVASHANGRGPEDWLKTYADFQK-VILSGDSAGGNIAHHMGIRQGQEK 176 (316)
Q Consensus 113 ~~~~~~~---------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~~~~~ 176 (316)
+.+..+. ..+|+......+.+. ...++ .+|+||||||.+|+.++.++|+
T Consensus 83 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------lgi~~~~~lvG~S~GG~va~~~a~~~P~-- 147 (339)
T PRK07581 83 GLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK-------------FGIERLALVVGWSMGAQQTYHWAVRYPD-- 147 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH-------------hCCCceEEEEEeCHHHHHHHHHHHHCHH--
Confidence 7654321 124555444455554 33478 4799999999999999999865
Q ss_pred ccCCccceeEEecccc
Q 043192 177 LEGINIDGICLLFPYF 192 (316)
Q Consensus 177 ~~~~~~~~~i~~~p~~ 192 (316)
+++++|++++..
T Consensus 148 ----~V~~Lvli~~~~ 159 (339)
T PRK07581 148 ----MVERAAPIAGTA 159 (339)
T ss_pred ----HHhhheeeecCC
Confidence 599999886543
No 73
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.59 E-value=8.3e-15 Score=120.41 Aligned_cols=176 Identities=13% Similarity=0.103 Sum_probs=108.9
Q ss_pred CCceEEEEEecCCCCCCCCc-cEEEEEcCCcccccCcch-hhh--HHHHHHHHHhcCcEEEeecCCC-CCCCCCCcchhh
Q 043192 49 EHNLSARIYFPNNTNRNQKL-PLVVYFHGGAFIFENAFS-LTY--HAYMNTLVSHAKIIAVSVDYRR-APEDPVPAAHED 123 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~-p~vv~iHGgg~~~g~~~~-~~~--~~~~~~l~~~~g~~v~~~d~r~-~~~~~~~~~~~d 123 (316)
+..+.+++|.|++..+++.+ |+|||+||+|- .|+-.. ... ..-+.....+.+|-|++|.|.- ..+.. .....-
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq-~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e-~~t~~~ 248 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQ-GGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE-EKTLLY 248 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCC-CCchhhhhhhcCccceeeecccCceEEEcccccccccccc-cccchh
Confidence 45799999999998777776 99999999884 333210 000 0001111222345566665442 11010 111122
Q ss_pred HHHHHHHHH-HhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC
Q 043192 124 SWTALKWVA-SHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP 202 (316)
Q Consensus 124 ~~~~~~~l~-~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 202 (316)
....++.+. ...+.+ .+|.+||++.|.|+||..++.++.++|+ .+++++++++--+...
T Consensus 249 l~~~idli~~vlas~y--------nID~sRIYviGlSrG~~gt~al~~kfPd------fFAaa~~iaG~~d~v~------ 308 (387)
T COG4099 249 LIEKIDLILEVLASTY--------NIDRSRIYVIGLSRGGFGTWALAEKFPD------FFAAAVPIAGGGDRVY------ 308 (387)
T ss_pred HHHHHHHHHHHHhhcc--------CcccceEEEEeecCcchhhHHHHHhCch------hhheeeeecCCCchhh------
Confidence 223333333 122233 3999999999999999999999999855 6899999887443100
Q ss_pred CCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEE
Q 043192 203 YVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVS 280 (316)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~ 280 (316)
.++.+...|++++|+.+|.+++ .++-++++|++.+. ++++.
T Consensus 309 -----------------------------------lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~--kv~Yt 351 (387)
T COG4099 309 -----------------------------------LVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR--KVNYT 351 (387)
T ss_pred -----------------------------------hhhhhccCceEEEEecCCCccccCcceeehHHHHhhcc--ccchh
Confidence 1111222289999999998774 67778888888776 66666
Q ss_pred EeC
Q 043192 281 EIM 283 (316)
Q Consensus 281 ~~~ 283 (316)
.+.
T Consensus 352 af~ 354 (387)
T COG4099 352 AFL 354 (387)
T ss_pred hhh
Confidence 554
No 74
>PLN02578 hydrolase
Probab=99.58 E-value=1e-13 Score=123.38 Aligned_cols=96 Identities=19% Similarity=0.165 Sum_probs=66.3
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcc---hhh-HHHHHHHHHHhcCCCCCcccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA---HED-SWTALKWVASHANGRGPEDWL 144 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~---~~d-~~~~~~~l~~~~~~~~~~~~~ 144 (316)
|.||++||.+ ++.. .|...+..++. +|.|+++|+++.+.+..+.. ..+ ...+.+++.+.
T Consensus 87 ~~vvliHG~~---~~~~--~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---------- 149 (354)
T PLN02578 87 LPIVLIHGFG---ASAF--HWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---------- 149 (354)
T ss_pred CeEEEECCCC---CCHH--HHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh----------
Confidence 5689999944 2322 45566666643 69999999998876554322 121 22333444432
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
..++++|+|||+||.+|+.++.++++ ++++++++++.
T Consensus 150 ----~~~~~~lvG~S~Gg~ia~~~A~~~p~------~v~~lvLv~~~ 186 (354)
T PLN02578 150 ----VKEPAVLVGNSLGGFTALSTAVGYPE------LVAGVALLNSA 186 (354)
T ss_pred ----ccCCeEEEEECHHHHHHHHHHHhChH------hcceEEEECCC
Confidence 23689999999999999999999855 59999998764
No 75
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.57 E-value=5.4e-13 Score=110.44 Aligned_cols=130 Identities=23% Similarity=0.374 Sum_probs=94.2
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHH
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKW 130 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~ 130 (316)
...+.++.|... +.+|+|||+||-. .... .|..++.+++. +||+|+.+|+..-....-....++....++|
T Consensus 3 p~~l~v~~P~~~---g~yPVv~f~~G~~----~~~s-~Ys~ll~hvAS-hGyIVV~~d~~~~~~~~~~~~~~~~~~vi~W 73 (259)
T PF12740_consen 3 PKPLLVYYPSSA---GTYPVVLFLHGFL----LINS-WYSQLLEHVAS-HGYIVVAPDLYSIGGPDDTDEVASAAEVIDW 73 (259)
T ss_pred CCCeEEEecCCC---CCcCEEEEeCCcC----CCHH-HHHHHHHHHHh-CceEEEEecccccCCCCcchhHHHHHHHHHH
Confidence 457889999876 7899999999933 2222 46677777755 5999999995433223345567889999999
Q ss_pred HHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 131 VASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 131 l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
+.+.....-. .....|..+++|+|||.||-+|..+++...+... ..++++++++.|+-.
T Consensus 74 l~~~L~~~l~---~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~-~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 74 LAKGLESKLP---LGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL-DLRFSALILLDPVDG 132 (259)
T ss_pred HHhcchhhcc---ccccccccceEEeeeCCCCHHHHHHHhhhccccc-ccceeEEEEeccccc
Confidence 9885433211 1113688999999999999999999988643211 347999999999873
No 76
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.56 E-value=3.1e-13 Score=115.93 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=68.6
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----cchhh-HHHHHHHHHHhcCCCCC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP----AAHED-SWTALKWVASHANGRGP 140 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d-~~~~~~~l~~~~~~~~~ 140 (316)
+..|.|||+||.+. +.. .|..+...|.. .||.|+++|+++++..... ..+++ +....+++.+.
T Consensus 16 ~~~p~vvliHG~~~---~~~--~w~~~~~~L~~-~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l------ 83 (273)
T PLN02211 16 RQPPHFVLIHGISG---GSW--CWYKIRCLMEN-SGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL------ 83 (273)
T ss_pred CCCCeEEEECCCCC---CcC--cHHHHHHHHHh-CCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc------
Confidence 45689999999553 222 46666665544 5999999999987643211 22333 33333333332
Q ss_pred cccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 141 EDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 141 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
...++++|+||||||.+++.++.++++ +++++|++++..
T Consensus 84 -------~~~~~v~lvGhS~GG~v~~~~a~~~p~------~v~~lv~~~~~~ 122 (273)
T PLN02211 84 -------PENEKVILVGHSAGGLSVTQAIHRFPK------KICLAVYVAATM 122 (273)
T ss_pred -------CCCCCEEEEEECchHHHHHHHHHhChh------heeEEEEecccc
Confidence 123789999999999999999987643 589999987753
No 77
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.56 E-value=4.3e-14 Score=116.22 Aligned_cols=175 Identities=18% Similarity=0.150 Sum_probs=96.4
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCC
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPG 200 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 200 (316)
++-...+++||+++. .++.++|+|+|.|.||-+|+.+|..++ .|+++|+++|..........
T Consensus 3 LEyfe~Ai~~L~~~p-----------~v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~ 64 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHP-----------EVDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGF 64 (213)
T ss_dssp CHHHHHHHHHHHCST-----------TB--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEE
T ss_pred hHHHHHHHHHHHhCC-----------CCCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhc
Confidence 466789999999986 588899999999999999999999974 59999999986533321111
Q ss_pred CCCC----CCcccccchhhh---hhhCC-CCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc---hHHHHHHHHH
Q 043192 201 EPYV----PEYWTTIIDEPW---QIARP-DTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG---RGLYYVTKLK 269 (316)
Q Consensus 201 ~~~~----~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~---~~~~~~~~l~ 269 (316)
.... +.+........+ ..+.. ......+.....-....+.++.+ |+|+++|++|.+++ .++.+.++|+
T Consensus 65 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~-piLli~g~dD~~WpS~~~a~~i~~rL~ 143 (213)
T PF08840_consen 65 YRDSSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKG-PILLISGEDDQIWPSSEMAEQIEERLK 143 (213)
T ss_dssp ETTE--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--S-EEEEEEETT-SSS-HHHHHHHHHHHHH
T ss_pred ccCCCccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcCC-CEEEEEeCCCCccchHHHHHHHHHHHH
Confidence 1100 000000000000 00000 00000000000111115677788 99999999999885 5677888999
Q ss_pred hCCCCcccEEEEeCCCccccccc-CC----------------------CcHHHHHHHHHHHHHHhcCC
Q 043192 270 ESGWKGDAKVSEIMGETHVFHLL-NP----------------------SSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 270 ~~g~~~~~~~~~~~~~~H~~~~~-~~----------------------~~~~~~~~~~~i~~fl~~~~ 314 (316)
++|.+.+++.+.|+++||.+..- .| +....++.++++++||++|.
T Consensus 144 ~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 144 AAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp CTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 99874458899999999987621 11 11235788999999999864
No 78
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.56 E-value=2.3e-13 Score=118.83 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=66.5
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-----chhhHHHHHHHHHHhcCCCCCccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-----AHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
+.||++||++. +.. ...+...+ ...+|.|+++|+|+.+.+..+. ...|....+..+.+.
T Consensus 28 ~~lvllHG~~~---~~~---~~~~~~~~-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~--------- 91 (306)
T TIGR01249 28 KPVVFLHGGPG---SGT---DPGCRRFF-DPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK--------- 91 (306)
T ss_pred CEEEEECCCCC---CCC---CHHHHhcc-CccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH---------
Confidence 56899999653 222 11222222 3358999999999877554322 234555555555554
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+.++++++||||||.+++.++.++++ .++++|+++++.
T Consensus 92 ----l~~~~~~lvG~S~GG~ia~~~a~~~p~------~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 ----LGIKNWLVFGGSWGSTLALAYAQTHPE------VVTGLVLRGIFL 130 (306)
T ss_pred ----cCCCCEEEEEECHHHHHHHHHHHHChH------hhhhheeecccc
Confidence 344689999999999999999998754 588888887654
No 79
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.56 E-value=1.3e-13 Score=113.81 Aligned_cols=189 Identities=19% Similarity=0.202 Sum_probs=106.8
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-----chhhHHHHHHHHHHhcCCCCCccccc
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-----AHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
||++||.+. +.. .|..++..+ + .||.|+++|+|+.+.+..+. ..++....+..+.+.
T Consensus 1 vv~~hG~~~---~~~--~~~~~~~~l-~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~----------- 62 (228)
T PF12697_consen 1 VVFLHGFGG---SSE--SWDPLAEAL-A-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA----------- 62 (228)
T ss_dssp EEEE-STTT---TGG--GGHHHHHHH-H-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-----------
T ss_pred eEEECCCCC---CHH--HHHHHHHHH-h-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-----------
Confidence 799999663 332 577777777 4 49999999999887654322 233333333333333
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccc-----------cchh
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTT-----------IIDE 214 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~ 214 (316)
...++++|+|||+||.+++.++.++++ .++++++++|........... ........ ....
T Consensus 63 --~~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T PF12697_consen 63 --LGIKKVILVGHSMGGMIALRLAARYPD------RVKGLVLLSPPPPLPDSPSRS-FGPSFIRRLLAWRSRSLRRLASR 133 (228)
T ss_dssp --TTTSSEEEEEETHHHHHHHHHHHHSGG------GEEEEEEESESSSHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --ccccccccccccccccccccccccccc------ccccceeeccccccccccccc-ccchhhhhhhhcccccccccccc
Confidence 333789999999999999999998754 599999999887432110000 00000000 0000
Q ss_pred hhhhhCCCC-C-----CCCCC--------ccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEE
Q 043192 215 PWQIARPDT-S-----GLDDP--------IINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVS 280 (316)
Q Consensus 215 ~~~~~~~~~-~-----~~~~~--------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~ 280 (316)
.+..+.... . ..... .........+.++++ |+++++|++|.+++ ....+.+.+... +++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pvl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~ 208 (228)
T PF12697_consen 134 FFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKV-PVLVIHGEDDPIVP--PESAEELADKLP--NAELV 208 (228)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSS-EEEEEEETTSSSSH--HHHHHHHHHHST--TEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCC-CeEEeecCCCCCCC--HHHHHHHHHHCC--CCEEE
Confidence 000000000 0 00000 000000014556667 99999999999886 223344443222 78999
Q ss_pred EeCCCcccccc
Q 043192 281 EIMGETHVFHL 291 (316)
Q Consensus 281 ~~~~~~H~~~~ 291 (316)
.+++++|....
T Consensus 209 ~~~~~gH~~~~ 219 (228)
T PF12697_consen 209 VIPGAGHFLFL 219 (228)
T ss_dssp EETTSSSTHHH
T ss_pred EECCCCCccHH
Confidence 99999997664
No 80
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.55 E-value=1.2e-12 Score=117.66 Aligned_cols=202 Identities=16% Similarity=0.199 Sum_probs=126.1
Q ss_pred eeEEecC---CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC---cEEEeecCCCCC--
Q 043192 42 KDIIYSS---EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK---IIAVSVDYRRAP-- 113 (316)
Q Consensus 42 ~~v~~~~---~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g---~~v~~~d~r~~~-- 113 (316)
+.+.+.+ +....+.+|+|+++. +.++|+|+++||..|.... .....+..+.++.. ++++.+|.....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~----~~~~~ld~li~~g~i~P~ivV~id~~~~~~R 255 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESM----PVWPALDSLTHRGQLPPAVYLLIDAIDTTHR 255 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcC----CHHHHHHHHHHcCCCCceEEEEECCCCcccc
Confidence 4455555 446889999999875 4679999999998875322 23355566666532 456777642111
Q ss_pred CCCCCc---chhhH-HHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEec
Q 043192 114 EDPVPA---AHEDS-WTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLF 189 (316)
Q Consensus 114 ~~~~~~---~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 189 (316)
...++. ..+.+ ...+-++.++. +...|+++.+|+|+||||..|+.+++++++ .+.+++++|
T Consensus 256 ~~el~~~~~f~~~l~~eLlP~I~~~y---------~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd------~Fg~v~s~S 320 (411)
T PRK10439 256 SQELPCNADFWLAVQQELLPQVRAIA---------PFSDDADRTVVAGQSFGGLAALYAGLHWPE------RFGCVLSQS 320 (411)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHhC---------CCCCCccceEEEEEChHHHHHHHHHHhCcc------cccEEEEec
Confidence 111111 11111 23334554442 123688899999999999999999999855 699999999
Q ss_pred ccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcc-ccchHHHHHHHH
Q 043192 190 PYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDL-LRGRGLYYVTKL 268 (316)
Q Consensus 190 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~-~~~~~~~~~~~l 268 (316)
|.+...... .. ....+....... .....+. .++|.+|+.|. +.+..+++++.|
T Consensus 321 gs~ww~~~~-~~---------~~~~l~~~l~~~---------------~~~~~~l-r~~i~~G~~E~~~~~~~~~l~~~L 374 (411)
T PRK10439 321 GSFWWPHRG-GQ---------QEGVLLEQLKAG---------------EVSARGL-RIVLEAGRREPMIMRANQALYAQL 374 (411)
T ss_pred cceecCCcc-CC---------chhHHHHHHHhc---------------ccCCCCc-eEEEeCCCCCchHHHHHHHHHHHH
Confidence 976321100 00 000011100000 0111112 58899999884 557889999999
Q ss_pred HhCCCCcccEEEEeCCCccccccc
Q 043192 269 KESGWKGDAKVSEIMGETHVFHLL 292 (316)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~H~~~~~ 292 (316)
++.|. ++++.+++| +|.+..+
T Consensus 375 ~~~G~--~~~~~~~~G-GHd~~~W 395 (411)
T PRK10439 375 HPAGH--SVFWRQVDG-GHDALCW 395 (411)
T ss_pred HHCCC--cEEEEECCC-CcCHHHH
Confidence 99999 999999998 6987754
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.54 E-value=4.1e-13 Score=113.06 Aligned_cols=127 Identities=20% Similarity=0.245 Sum_probs=87.8
Q ss_pred eeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC--
Q 043192 40 DSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV-- 117 (316)
Q Consensus 40 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-- 117 (316)
..+.+.+++++-..+++..++.. ...|.||.+|| ..|+..+...+.++..+ .+.||.++++++|+++....
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p~~---~~~P~vVl~HG---L~G~s~s~y~r~L~~~~-~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDPRA---AKKPLVVLFHG---LEGSSNSPYARGLMRAL-SRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCccc---cCCceEEEEec---cCCCCcCHHHHHHHHHH-HhcCCeEEEEecccccCCcccC
Confidence 34456667676677777775433 46699999999 56666654444555444 55599999999998865322
Q ss_pred -----CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 118 -----PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 118 -----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
....+|+...+++++.. .-+.++..+|.|+||++-..+..+..++ ..+.+.+.+|-
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~-------------~~~r~~~avG~SLGgnmLa~ylgeeg~d----~~~~aa~~vs~ 183 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKAR-------------FPPRPLYAVGFSLGGNMLANYLGEEGDD----LPLDAAVAVSA 183 (345)
T ss_pred cceecccchhHHHHHHHHHHHh-------------CCCCceEEEEecccHHHHHHHHHhhccC----cccceeeeeeC
Confidence 23358999999999886 4468999999999997777776665553 23455555443
No 82
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.54 E-value=5e-13 Score=118.97 Aligned_cols=66 Identities=18% Similarity=0.131 Sum_probs=48.8
Q ss_pred cccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEE-eCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 238 KLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSE-IMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~-~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
.++++++ |+|+++|++|.+++ ..+.+++.+..... .++++. +++++|...+ ++.+++.+.|.+||+
T Consensus 283 ~l~~I~~-P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~--~v~~~~i~~~~GH~~~l-----e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 283 ALSRIKA-PFLVVSITSDWLFPPAESRELAKALPAAGL--RVTYVEIESPYGHDAFL-----VETDQVEELIRGFLR 351 (351)
T ss_pred HHhhCCC-CEEEEEeCCccccCHHHHHHHHHHHhhcCC--ceEEEEeCCCCCcchhh-----cCHHHHHHHHHHHhC
Confidence 4567777 99999999998764 57778888876543 334444 4789996554 556889999999985
No 83
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.54 E-value=2.3e-12 Score=108.77 Aligned_cols=124 Identities=18% Similarity=0.261 Sum_probs=82.3
Q ss_pred CCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC
Q 043192 36 TTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED 115 (316)
Q Consensus 36 ~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~ 115 (316)
...+..+.++++ + +++.+...- .+..|+|+++||-. .+ +..|+..+..++.+ ||.|+++|.|+.+.+
T Consensus 19 ~~~~~hk~~~~~---g--I~~h~~e~g--~~~gP~illlHGfP---e~--wyswr~q~~~la~~-~~rviA~DlrGyG~S 85 (322)
T KOG4178|consen 19 LSAISHKFVTYK---G--IRLHYVEGG--PGDGPIVLLLHGFP---ES--WYSWRHQIPGLASR-GYRVIAPDLRGYGFS 85 (322)
T ss_pred hhhcceeeEEEc---c--EEEEEEeec--CCCCCEEEEEccCC---cc--chhhhhhhhhhhhc-ceEEEecCCCCCCCC
Confidence 345556666666 3 444444433 35679999999933 22 22455666666555 899999999998766
Q ss_pred CCCcc-----hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 116 PVPAA-----HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 116 ~~~~~-----~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
+-|.. ...+..-+..+.+. +.-+|+++.||++|+.+|..++..+++ +++++++++.
T Consensus 86 d~P~~~~~Yt~~~l~~di~~lld~-------------Lg~~k~~lvgHDwGaivaw~la~~~Pe------rv~~lv~~nv 146 (322)
T KOG4178|consen 86 DAPPHISEYTIDELVGDIVALLDH-------------LGLKKAFLVGHDWGAIVAWRLALFYPE------RVDGLVTLNV 146 (322)
T ss_pred CCCCCcceeeHHHHHHHHHHHHHH-------------hccceeEEEeccchhHHHHHHHHhChh------hcceEEEecC
Confidence 55444 22222233333333 224899999999999999999999855 6899987764
Q ss_pred c
Q 043192 191 Y 191 (316)
Q Consensus 191 ~ 191 (316)
.
T Consensus 147 ~ 147 (322)
T KOG4178|consen 147 P 147 (322)
T ss_pred C
Confidence 3
No 84
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.53 E-value=7.1e-13 Score=118.23 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=70.2
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-------chhhHHHHHHHHHHhcCCCC
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-------AHEDSWTALKWVASHANGRG 139 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~ 139 (316)
..|.||++||.+. +. ..|..++..+. + +|.|+++|+++.+.+..+. ..++....+..+.+.
T Consensus 126 ~~~~ivllHG~~~---~~--~~w~~~~~~L~-~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~----- 193 (383)
T PLN03084 126 NNPPVLLIHGFPS---QA--YSYRKVLPVLS-K-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE----- 193 (383)
T ss_pred CCCeEEEECCCCC---CH--HHHHHHHHHHh-c-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-----
Confidence 3578999999542 22 24667776664 4 7999999999886554332 233433333333333
Q ss_pred CcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 140 PEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 140 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
+..+++.|+|||+||.+++.++.++++ +++++|+++|..
T Consensus 194 --------l~~~~~~LvG~s~GG~ia~~~a~~~P~------~v~~lILi~~~~ 232 (383)
T PLN03084 194 --------LKSDKVSLVVQGYFSPPVVKYASAHPD------KIKKLILLNPPL 232 (383)
T ss_pred --------hCCCCceEEEECHHHHHHHHHHHhChH------hhcEEEEECCCC
Confidence 334689999999999999999998754 699999999864
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.52 E-value=5.2e-13 Score=117.24 Aligned_cols=229 Identities=17% Similarity=0.146 Sum_probs=120.4
Q ss_pred eeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-CC-
Q 043192 41 SKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-VP- 118 (316)
Q Consensus 41 ~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-~~- 118 (316)
..++.+++ ..+.+.+.+|++ +++.|+||++-| ..+-.. .+.......+...|++++.+|.++-+... ++
T Consensus 167 ~v~iP~eg-~~I~g~LhlP~~---~~p~P~VIv~gG---lDs~qe--D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 167 EVEIPFEG-KTIPGYLHLPSG---EKPYPTVIVCGG---LDSLQE--DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp EEEEEETT-CEEEEEEEESSS---SS-EEEEEEE-----TTS-GG--GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred EEEEeeCC-cEEEEEEEcCCC---CCCCCEEEEeCC---cchhHH--HHHHHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 33444543 688999999984 478898888755 122222 34444444445569999999999865532 11
Q ss_pred --cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 119 --AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 119 --~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
+.-.-..++++||.+.. .+|..||+++|.|+||++|..+|... +.++++++...|.+...-
T Consensus 238 ~~D~~~l~~aVLd~L~~~p-----------~VD~~RV~~~G~SfGGy~AvRlA~le------~~RlkavV~~Ga~vh~~f 300 (411)
T PF06500_consen 238 TQDSSRLHQAVLDYLASRP-----------WVDHTRVGAWGFSFGGYYAVRLAALE------DPRLKAVVALGAPVHHFF 300 (411)
T ss_dssp -S-CCHHHHHHHHHHHHST-----------TEEEEEEEEEEETHHHHHHHHHHHHT------TTT-SEEEEES---SCGG
T ss_pred CcCHHHHHHHHHHHHhcCC-----------ccChhheEEEEeccchHHHHHHHHhc------ccceeeEeeeCchHhhhh
Confidence 11122557788888764 49999999999999999999998654 347999999998753211
Q ss_pred CCCCC-CCCCCcccccchhhhhhhCCCCCCCC------CCccCCCCCCcc--cCCCCCcEEEEEcCCccccchHHHHHHH
Q 043192 197 PIPGE-PYVPEYWTTIIDEPWQIARPDTSGLD------DPIINPVADPKL--SSLGCNRLLVFVAQLDLLRGRGLYYVTK 267 (316)
Q Consensus 197 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~P~li~~G~~D~~~~~~~~~~~~ 267 (316)
..... ...+. .....+..-.+...... -...|-....-+ .+.++ |+|.+.|++|.+.+.... ..
T Consensus 301 t~~~~~~~~P~----my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~-plL~i~~~~D~v~P~eD~--~l 373 (411)
T PF06500_consen 301 TDPEWQQRVPD----MYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPT-PLLAINGEDDPVSPIEDS--RL 373 (411)
T ss_dssp H-HHHHTTS-H----HHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHH--HH
T ss_pred ccHHHHhcCCH----HHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCc-ceEEeecCCCCCCCHHHH--HH
Confidence 10000 00000 00011111111100000 001121111122 34556 999999999998875442 23
Q ss_pred HHhCCCCcccEEEEeCCCc-ccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 268 LKESGWKGDAKVSEIMGET-HVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 268 l~~~g~~~~~~~~~~~~~~-H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+...+. +-+...++... | ..-.+.+..+.+||++.
T Consensus 374 ia~~s~--~gk~~~~~~~~~~---------~gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 374 IAESST--DGKALRIPSKPLH---------MGYPQALDEIYKWLEDK 409 (411)
T ss_dssp HHHTBT--T-EEEEE-SSSHH---------HHHHHHHHHHHHHHHHH
T ss_pred HHhcCC--CCceeecCCCccc---------cchHHHHHHHHHHHHHh
Confidence 333333 45666666544 5 22368889999999863
No 86
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=5.8e-14 Score=114.23 Aligned_cols=243 Identities=16% Similarity=0.126 Sum_probs=148.8
Q ss_pred ceeeccCceeecccCccCCC---CCCCCCCceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcch
Q 043192 12 FIISQDGHVHRLVGEEIIPA---SLDPTTHVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFS 86 (316)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~ 86 (316)
+..++++++.+....+.-+. ..-..+.++.-+|+|++ +.++.+++.+|... +++.|.||..||-+...|.
T Consensus 24 FdeFW~~~l~e~~~~~~~p~l~~~d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~--- 98 (321)
T COG3458 24 FDEFWKKTLEEARKVPPEPVLERSDFTLPRVEVYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGE--- 98 (321)
T ss_pred HHHHHHHHHHHHhcCCCCceEEeccccCCceEEEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCCC---
Confidence 34556666666653332222 12234577788899987 55889999999876 4789999999995533332
Q ss_pred hhhHHHHHHHHHhcCcEEEeecCCCCCCC-----------CC-----------------CcchhhHHHHHHHHHHhcCCC
Q 043192 87 LTYHAYMNTLVSHAKIIAVSVDYRRAPED-----------PV-----------------PAAHEDSWTALKWVASHANGR 138 (316)
Q Consensus 87 ~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----------~~-----------------~~~~~d~~~~~~~l~~~~~~~ 138 (316)
+..++ .++. .||+|+++|.|+.+.. +. .....|+..+++-+.+..
T Consensus 99 --~~~~l-~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~--- 171 (321)
T COG3458 99 --WHDML-HWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLD--- 171 (321)
T ss_pred --ccccc-cccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccC---
Confidence 33333 2333 4999999999964321 11 112468888888887765
Q ss_pred CCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhh
Q 043192 139 GPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQI 218 (316)
Q Consensus 139 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (316)
.+|..||++.|.|.||.+++.++... ++++++++..|++.-..+..+....... ..+..+.+.
T Consensus 172 --------~vde~Ri~v~G~SqGGglalaaaal~-------~rik~~~~~~Pfl~df~r~i~~~~~~~y--dei~~y~k~ 234 (321)
T COG3458 172 --------EVDEERIGVTGGSQGGGLALAAAALD-------PRIKAVVADYPFLSDFPRAIELATEGPY--DEIQTYFKR 234 (321)
T ss_pred --------ccchhheEEeccccCchhhhhhhhcC-------hhhhcccccccccccchhheeecccCcH--HHHHHHHHh
Confidence 59999999999999999999998763 5799999999998655544333221111 011111111
Q ss_pred hCCCCCCCCCCccCCCCCCcc-cCCCCCcEEEEEcCCccccchHH--HHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 219 ARPDTSGLDDPIINPVADPKL-SSLGCNRLLVFVAQLDLLRGRGL--YYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~li~~G~~D~~~~~~~--~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
..+.. .....-++-+....+ ..++. |+|+..|--|.+++.+- ..++++.. ..++.+|+--.|...
T Consensus 235 h~~~e-~~v~~TL~yfD~~n~A~RiK~-pvL~svgL~D~vcpPstqFA~yN~l~~-----~K~i~iy~~~aHe~~ 302 (321)
T COG3458 235 HDPKE-AEVFETLSYFDIVNLAARIKV-PVLMSVGLMDPVCPPSTQFAAYNALTT-----SKTIEIYPYFAHEGG 302 (321)
T ss_pred cCchH-HHHHHHHhhhhhhhHHHhhcc-ceEEeecccCCCCCChhhHHHhhcccC-----CceEEEeeccccccC
Confidence 11110 000000000000011 12344 99999999999986544 44445543 678888888889555
No 87
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.51 E-value=7.7e-13 Score=137.15 Aligned_cols=240 Identities=16% Similarity=0.113 Sum_probs=134.0
Q ss_pred eeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc
Q 043192 40 DSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA 119 (316)
Q Consensus 40 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~ 119 (316)
....+.++.+ +.++.+.+-.... ....|.||++||.+ ++.. .|..++..+.. +|.|+.+|+|+.+.+..+.
T Consensus 1345 ~~~~~~v~~~-~~~~~i~~~~~G~-~~~~~~vVllHG~~---~s~~--~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~ 1415 (1655)
T PLN02980 1345 RTYELRVDVD-GFSCLIKVHEVGQ-NAEGSVVLFLHGFL---GTGE--DWIPIMKAISG--SARCISIDLPGHGGSKIQN 1415 (1655)
T ss_pred ceEEEEEccC-ceEEEEEEEecCC-CCCCCeEEEECCCC---CCHH--HHHHHHHHHhC--CCEEEEEcCCCCCCCCCcc
Confidence 3344555543 3555444332211 23457899999955 3333 46666666643 5999999999887654321
Q ss_pred -----------chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe
Q 043192 120 -----------AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL 188 (316)
Q Consensus 120 -----------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 188 (316)
.++++.+.+..+.++ .+.++++|+||||||.+|+.++.++++ ++++++++
T Consensus 1416 ~~~~~~~~~~~si~~~a~~l~~ll~~-------------l~~~~v~LvGhSmGG~iAl~~A~~~P~------~V~~lVli 1476 (1655)
T PLN02980 1416 HAKETQTEPTLSVELVADLLYKLIEH-------------ITPGKVTLVGYSMGARIALYMALRFSD------KIEGAVII 1476 (1655)
T ss_pred ccccccccccCCHHHHHHHHHHHHHH-------------hCCCCEEEEEECHHHHHHHHHHHhChH------hhCEEEEE
Confidence 234444433333333 335789999999999999999998754 59999998
Q ss_pred cccccCCCCCCC-C--CC-C---CCcccccchhhhhhhCCCC------------------CCCCCC--------cc----
Q 043192 189 FPYFWGSAPIPG-E--PY-V---PEYWTTIIDEPWQIARPDT------------------SGLDDP--------II---- 231 (316)
Q Consensus 189 ~p~~~~~~~~~~-~--~~-~---~~~~~~~~~~~~~~~~~~~------------------~~~~~~--------~~---- 231 (316)
++.......... . .. . ..+.......+...+.... ....+. ..
T Consensus 1477 s~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1556 (1655)
T PLN02980 1477 SGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGR 1556 (1655)
T ss_pred CCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcc
Confidence 864321110000 0 00 0 0000000000000000000 000000 00
Q ss_pred CCCCCCcccCCCCCcEEEEEcCCccccc-hHHHHHHHHHhCCC------CcccEEEEeCCCcccccccCCCcHHHHHHHH
Q 043192 232 NPVADPKLSSLGCNRLLVFVAQLDLLRG-RGLYYVTKLKESGW------KGDAKVSEIMGETHVFHLLNPSSLHAIRMLK 304 (316)
Q Consensus 232 ~~~~~~~~~~~~~~P~li~~G~~D~~~~-~~~~~~~~l~~~g~------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 304 (316)
.+.....+.++.+ |+|+++|++|.+.. .+.++.+.+..... ...++++++++++|.... +..+.+.+
T Consensus 1557 ~~dl~~~L~~I~~-PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-----E~Pe~f~~ 1630 (1655)
T PLN02980 1557 QPSLWEDLKQCDT-PLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-----ENPLPVIR 1630 (1655)
T ss_pred cchHHHHHhhCCC-CEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHH-----HCHHHHHH
Confidence 0000114677788 99999999998764 44556666544200 002689999999996554 55678999
Q ss_pred HHHHHHhcC
Q 043192 305 TTVDFIHGK 313 (316)
Q Consensus 305 ~i~~fl~~~ 313 (316)
.|.+||++.
T Consensus 1631 ~I~~FL~~~ 1639 (1655)
T PLN02980 1631 ALRKFLTRL 1639 (1655)
T ss_pred HHHHHHHhc
Confidence 999999874
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.49 E-value=3.2e-12 Score=120.19 Aligned_cols=125 Identities=13% Similarity=0.068 Sum_probs=90.1
Q ss_pred CCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-----C-Ccch
Q 043192 48 SEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-----V-PAAH 121 (316)
Q Consensus 48 ~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~-~~~~ 121 (316)
++..+.+++|.|++. ++.|+||++||.+...+.... ........+ .+.||.|+++|+|+.+.+. + ....
T Consensus 5 DG~~L~~~~~~P~~~---~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l-~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~ 79 (550)
T TIGR00976 5 DGTRLAIDVYRPAGG---GPVPVILSRTPYGKDAGLRWG-LDKTEPAWF-VAQGYAVVIQDTRGRGASEGEFDLLGSDEA 79 (550)
T ss_pred CCCEEEEEEEecCCC---CCCCEEEEecCCCCchhhccc-cccccHHHH-HhCCcEEEEEeccccccCCCceEecCcccc
Confidence 345688889999754 478999999986642210000 111223344 4459999999999875442 2 5667
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
+|+.++++|+.++. ..+ .+|+++|+|+||.+++.++... +..+++++..+++.+..
T Consensus 80 ~D~~~~i~~l~~q~-----------~~~-~~v~~~G~S~GG~~a~~~a~~~------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQP-----------WCD-GNVGMLGVSYLAVTQLLAAVLQ------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCC-----------CCC-CcEEEEEeChHHHHHHHHhccC------CCceeEEeecCcccchh
Confidence 99999999998874 133 6999999999999999999875 34699999988876544
No 89
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.49 E-value=2.3e-12 Score=112.53 Aligned_cols=213 Identities=16% Similarity=0.165 Sum_probs=123.1
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC-CCCC----CcchhhHHHHHHHHHHhcCCCCC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP-EDPV----PAAHEDSWTALKWVASHANGRGP 140 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~----~~~~~d~~~~~~~l~~~~~~~~~ 140 (316)
...|.||++||-+ ++.. .|+..+..+....|+.|+++|..+.+ .... .-.+.+....+.-+-..
T Consensus 56 ~~~~pvlllHGF~---~~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~------ 124 (326)
T KOG1454|consen 56 KDKPPVLLLHGFG---ASSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE------ 124 (326)
T ss_pred CCCCcEEEecccc---CCcc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh------
Confidence 4678899999933 2322 57777888878778999999988744 2211 22234444444333332
Q ss_pred cccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeE---EecccccCCCCCCCCC------------CCC
Q 043192 141 EDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGIC---LLFPYFWGSAPIPGEP------------YVP 205 (316)
Q Consensus 141 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i---~~~p~~~~~~~~~~~~------------~~~ 205 (316)
....++.|+|||+||.+|+.+|..+++ .+++++ ++.+............ ...
T Consensus 125 -------~~~~~~~lvghS~Gg~va~~~Aa~~P~------~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (326)
T KOG1454|consen 125 -------VFVEPVSLVGHSLGGIVALKAAAYYPE------TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLI 191 (326)
T ss_pred -------hcCcceEEEEeCcHHHHHHHHHHhCcc------cccceeeecccccccccCCcchhHHHHhhhhhccHhhhcC
Confidence 233569999999999999999999855 688888 5555433221110000 000
Q ss_pred -Ccccccc----hhhhhhh----CC-------------C---CCCCCCCccC----CC----C-CCcccCCC-CCcEEEE
Q 043192 206 -EYWTTII----DEPWQIA----RP-------------D---TSGLDDPIIN----PV----A-DPKLSSLG-CNRLLVF 250 (316)
Q Consensus 206 -~~~~~~~----~~~~~~~----~~-------------~---~~~~~~~~~~----~~----~-~~~~~~~~-~~P~li~ 250 (316)
....... ...+... .. . .....+.+++ .. . ...++++. + |+||+
T Consensus 192 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-pvlii 270 (326)
T KOG1454|consen 192 PLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKC-PVLII 270 (326)
T ss_pred ccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCC-ceEEE
Confidence 0000000 0000000 00 0 0000011000 00 0 01344555 6 99999
Q ss_pred EcCCccccch--HHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 251 VAQLDLLRGR--GLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 251 ~G~~D~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
+|++|.+++. +..+.+.+ . +++++++++++|.-. .+..+++.+.|..|++.+.
T Consensus 271 ~G~~D~~~p~~~~~~~~~~~----p--n~~~~~I~~~gH~~h-----~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 271 WGDKDQIVPLELAEELKKKL----P--NAELVEIPGAGHLPH-----LERPEEVAALLRSFIARLR 325 (326)
T ss_pred EcCcCCccCHHHHHHHHhhC----C--CceEEEeCCCCcccc-----cCCHHHHHHHHHHHHHHhc
Confidence 9999998863 34333333 2 899999999999554 4566899999999998753
No 90
>PLN02872 triacylglycerol lipase
Probab=99.49 E-value=8.6e-13 Score=117.99 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=78.0
Q ss_pred CceeeeEEecCCCceEEEEEe-cCCC--CCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCC
Q 043192 38 HVDSKDIIYSSEHNLSARIYF-PNNT--NRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPE 114 (316)
Q Consensus 38 ~~~~~~v~~~~~~~~~~~~~~-P~~~--~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~ 114 (316)
+...++-.+.+.++..+.++. |... .....+|+|+++||.+..............+...+++.||.|+.+|.|++..
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccc
Confidence 444555555544444444443 3221 1123468899999954221110000001123334455699999999997531
Q ss_pred C----------------CCCcc-hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccc
Q 043192 115 D----------------PVPAA-HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKL 177 (316)
Q Consensus 115 ~----------------~~~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 177 (316)
. ++... ..|+.++++++.+. ..++++++||||||.+++.++. .++.
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~--------------~~~~v~~VGhS~Gg~~~~~~~~-~p~~-- 183 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI--------------TNSKIFIVGHSQGTIMSLAALT-QPNV-- 183 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc--------------cCCceEEEEECHHHHHHHHHhh-ChHH--
Confidence 1 11112 26888999998753 1368999999999999986553 3321
Q ss_pred cCCccceeEEecccc
Q 043192 178 EGINIDGICLLFPYF 192 (316)
Q Consensus 178 ~~~~~~~~i~~~p~~ 192 (316)
..+++.+++++|..
T Consensus 184 -~~~v~~~~~l~P~~ 197 (395)
T PLN02872 184 -VEMVEAAALLCPIS 197 (395)
T ss_pred -HHHHHHHHHhcchh
Confidence 12467777777754
No 91
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.49 E-value=1.6e-13 Score=107.40 Aligned_cols=215 Identities=13% Similarity=0.162 Sum_probs=132.4
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC--CC---CC-CCC-------
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR--RA---PE-DPV------- 117 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r--~~---~~-~~~------- 117 (316)
.+...+|+|+....+++-|++.|+-| .+.......-.+..++.+.++|++|+.||-. +. ++ .+|
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 57788999998766677899999998 3343332223345567888999999999954 21 11 011
Q ss_pred ------CcchhhHHHHHHHHHHhcCCCCC-cccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 118 ------PAAHEDSWTALKWVASHANGRGP-EDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 118 ------~~~~~d~~~~~~~l~~~~~~~~~-~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
......-..+++|+.++.+.+-+ .+. .+|+.++.|.||||||+.|+..+++.+. +.+.+-.++|
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~---pld~~k~~IfGHSMGGhGAl~~~Lkn~~------kykSvSAFAP 174 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANV---PLDPLKVGIFGHSMGGHGALTIYLKNPS------KYKSVSAFAP 174 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccc---cccchhcceeccccCCCceEEEEEcCcc------cccceecccc
Confidence 11123334566777666544322 222 4899999999999999999999988643 6888888888
Q ss_pred cccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccch---HHHHHHH
Q 043192 191 YFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGR---GLYYVTK 267 (316)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~---~~~~~~~ 267 (316)
+.+...-......-... -......|..|.+.. .++ ...+.+. -+||-.|+.|.+... .+.|.++
T Consensus 175 I~NP~~cpWGqKAf~gY-LG~~ka~W~~yDat~------lik-----~y~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a 241 (283)
T KOG3101|consen 175 ICNPINCPWGQKAFTGY-LGDNKAQWEAYDATH------LIK-----NYRGVGD-DILIDQGAADNFLAEQLLPENLLEA 241 (283)
T ss_pred ccCcccCcchHHHhhcc-cCCChHHHhhcchHH------HHH-----hcCCCCc-cEEEecCccchhhhhhcChHHHHHH
Confidence 88655422111100000 001122222222210 111 3334444 689999999987742 3555566
Q ss_pred HHhCC-CCcccEEEEeCCCccccccc
Q 043192 268 LKESG-WKGDAKVSEIMGETHVFHLL 292 (316)
Q Consensus 268 l~~~g-~~~~~~~~~~~~~~H~~~~~ 292 (316)
.+... . ++.++.-+|-+|.+...
T Consensus 242 ~~~~~~~--~v~~r~~~gyDHSYyfI 265 (283)
T KOG3101|consen 242 CKATWQA--PVVFRLQEGYDHSYYFI 265 (283)
T ss_pred hhccccc--cEEEEeecCCCcceeee
Confidence 65432 3 78888999999998754
No 92
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.48 E-value=1.6e-12 Score=116.67 Aligned_cols=69 Identities=26% Similarity=0.230 Sum_probs=54.1
Q ss_pred cccCCCCCcEEEEEcCCcccc--chHHHHHHHHHhCCCCcccEEEEeC-CCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 238 KLSSLGCNRLLVFVAQLDLLR--GRGLYYVTKLKESGWKGDAKVSEIM-GETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
.+.++++ |+|+++|++|.++ +..+.+++.+...+. .+++++++ +++|...+ ++.+++.+.+.+||++..
T Consensus 304 ~l~~I~~-PtLvI~G~~D~~~p~~~~~~la~~i~~a~~--~~~l~~i~~~~GH~~~l-----e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 304 ALARIKA-RFLVVSFTSDWLFPPARSREIVDALLAAGA--DVSYAEIDSPYGHDAFL-----LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHhcCCC-CEEEEEECCccccCHHHHHHHHHHHHhcCC--CeEEEEeCCCCCchhHh-----cCHHHHHHHHHHHHHhhh
Confidence 4567888 9999999999876 366778888887665 56888775 99996554 455788999999998753
No 93
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.47 E-value=1.7e-12 Score=102.98 Aligned_cols=178 Identities=19% Similarity=0.255 Sum_probs=127.0
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC----C------------CCCCCcchhhHHHHHHHHH
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA----P------------EDPVPAAHEDSWTALKWVA 132 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----~------------~~~~~~~~~d~~~~~~~l~ 132 (316)
.+||.|.- ..|.... ..+..+..++.. ||.|++||+-.+ + .++.+...+|+...++||+
T Consensus 40 ~~li~i~D---vfG~~~~-n~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 40 KVLIVIQD---VFGFQFP-NTREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred eEEEEEEe---eeccccH-HHHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH
Confidence 46666655 3333321 234455566555 999999997654 1 2345667899999999999
Q ss_pred HhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccc
Q 043192 133 SHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTII 212 (316)
Q Consensus 133 ~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 212 (316)
.+ .+..+|+++|+++||.++..+....+ .+.++++.+|.+....
T Consensus 115 ~~-------------g~~kkIGv~GfCwGak~vv~~~~~~~-------~f~a~v~~hps~~d~~---------------- 158 (242)
T KOG3043|consen 115 NH-------------GDSKKIGVVGFCWGAKVVVTLSAKDP-------EFDAGVSFHPSFVDSA---------------- 158 (242)
T ss_pred Hc-------------CCcceeeEEEEeecceEEEEeeccch-------hheeeeEecCCcCChh----------------
Confidence 65 66789999999999999888876643 4888888887652110
Q ss_pred hhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 213 DEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
+..++.+ |++++.|+.|.+++ .-..+.+++++.... ..++.+|+|.+|+|.
T Consensus 159 -------------------------D~~~vk~-Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~-~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 159 -------------------------DIANVKA-PILFLFAELDEDVPPKDVKAWEEKLKENPAV-GSQVKTFSGVGHGFV 211 (242)
T ss_pred -------------------------HHhcCCC-CEEEEeecccccCCHHHHHHHHHHHhcCccc-ceeEEEcCCccchhh
Confidence 4555556 99999999999864 445667777776532 368999999999999
Q ss_pred c--cCC----CcHHHHHHHHHHHHHHhcCC
Q 043192 291 L--LNP----SSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 291 ~--~~~----~~~~~~~~~~~i~~fl~~~~ 314 (316)
. .+. .....++.++.+++|++.+.
T Consensus 212 ~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 212 ARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 5 222 33446888899999998763
No 94
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.46 E-value=9.4e-13 Score=116.81 Aligned_cols=66 Identities=11% Similarity=0.006 Sum_probs=49.6
Q ss_pred cccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCC-CcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 238 KLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMG-ETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
.+.++.+ |+|+++|++|.+++ ..+++.+.+.. +.+++++++ ++|.... ++.+++.+.+.+||++..
T Consensus 272 ~l~~I~~-PtLvi~G~~D~~~p~~~~~~~~~~i~p-----~a~l~~i~~~aGH~~~l-----E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRV-PTVVVAVEGDRLVPLADLVELAEGLGP-----RGSLRVLRSPYGHDAFL-----KETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCC-CeEEEEeCCCEeeCHHHHHHHHHHcCC-----CCeEEEEeCCccHHHHh-----cCHHHHHHHHHHHHHhcc
Confidence 3567777 99999999999875 45555554421 578999985 9996664 556899999999998754
No 95
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.44 E-value=1.5e-13 Score=118.52 Aligned_cols=210 Identities=16% Similarity=0.056 Sum_probs=101.7
Q ss_pred CceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccc----cCcc--------h-hhhHHHHHHHHHhcCc
Q 043192 38 HVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIF----ENAF--------S-LTYHAYMNTLVSHAKI 102 (316)
Q Consensus 38 ~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~----g~~~--------~-~~~~~~~~~l~~~~g~ 102 (316)
+...+.+.+.. +..+++.++.|++. +++.|+||++||-|... |... . .....+...|+ ++||
T Consensus 85 GY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~GY 161 (390)
T PF12715_consen 85 GYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRGY 161 (390)
T ss_dssp TEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTTS
T ss_pred CeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCCC
Confidence 33444455544 44788899999986 57899999999844321 1000 0 00122445554 4599
Q ss_pred EEEeecCCCCCCCC----------CCc-----------------chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEE
Q 043192 103 IAVSVDYRRAPEDP----------VPA-----------------AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVIL 155 (316)
Q Consensus 103 ~v~~~d~r~~~~~~----------~~~-----------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l 155 (316)
+|+++|-.+.++.. ... ..-|...+++||.+.. .+|++||++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp-----------eVD~~RIG~ 230 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLP-----------EVDPDRIGC 230 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T-----------TEEEEEEEE
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc-----------ccCccceEE
Confidence 99999977543211 000 0235556888888776 599999999
Q ss_pred EeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC-----CCCCCCCCCCcccccchhhhhhhCCCCCC-CCCC
Q 043192 156 SGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA-----PIPGEPYVPEYWTTIIDEPWQIARPDTSG-LDDP 229 (316)
Q Consensus 156 ~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 229 (316)
+|+||||..++.+++.. .+|++.+..+-+....+ ....... ...+......+.|.... .+.+
T Consensus 231 ~GfSmGg~~a~~LaALD-------dRIka~v~~~~l~~~~~~~~~mt~~~~~~-----~~~~~~~~~~~iPgl~r~~D~P 298 (390)
T PF12715_consen 231 MGFSMGGYRAWWLAALD-------DRIKATVANGYLCTTQERALLMTMPNNNG-----LRGFPNCICNYIPGLWRYFDFP 298 (390)
T ss_dssp EEEGGGHHHHHHHHHH--------TT--EEEEES-B--HHHHHHHB----TTS---------SS-GGG--TTCCCC--HH
T ss_pred EeecccHHHHHHHHHcc-------hhhHhHhhhhhhhccchhhHhhccccccc-----cCcCcchhhhhCccHHhhCccH
Confidence 99999999999999873 46888776543321111 0000000 00011111122222111 1111
Q ss_pred ccCCCCCCcccCC--CCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCC
Q 043192 230 IINPVADPKLSSL--GCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGE 285 (316)
Q Consensus 230 ~~~~~~~~~~~~~--~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 285 (316)
++..+ |. |+|++.|+.|.+.+.. .++....|.+.++++..||+.
T Consensus 299 --------dIasliAPR-Pll~~nG~~Dklf~iV---~~AY~~~~~p~n~~~~~~p~~ 344 (390)
T PF12715_consen 299 --------DIASLIAPR-PLLFENGGKDKLFPIV---RRAYAIMGAPDNFQIHHYPKF 344 (390)
T ss_dssp --------HHHHTTTTS--EEESS-B-HHHHHHH---HHHHHHTT-GGGEEE---GGG
T ss_pred --------HHHHHhCCC-cchhhcCCcccccHHH---HHHHHhcCCCcceEEeecccc
Confidence 12111 33 9999999999876543 344555666658899988863
No 96
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.43 E-value=1.8e-12 Score=106.11 Aligned_cols=121 Identities=20% Similarity=0.341 Sum_probs=83.6
Q ss_pred eeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC----
Q 043192 41 SKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP---- 116 (316)
Q Consensus 41 ~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---- 116 (316)
.++|.+++++ +..++|+--.. ....|++++.||||+..- .|..++.++.......++++|.|++++..
T Consensus 50 kedv~i~~~~-~t~n~Y~t~~~--~t~gpil~l~HG~G~S~L-----SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 50 KEDVSIDGSD-LTFNVYLTLPS--ATEGPILLLLHGGGSSAL-----SFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred ccccccCCCc-ceEEEEEecCC--CCCccEEEEeecCcccch-----hHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 4456666543 24555543322 235699999999986432 46788889999888999999999987653
Q ss_pred ----CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe
Q 043192 117 ----VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL 188 (316)
Q Consensus 117 ----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 188 (316)
.....+|+.+.++.+-.. .+.+|+|+||||||.+|.+.+...-- +.+.|++.+
T Consensus 122 ~dlS~eT~~KD~~~~i~~~fge--------------~~~~iilVGHSmGGaIav~~a~~k~l-----psl~Gl~vi 178 (343)
T KOG2564|consen 122 DDLSLETMSKDFGAVIKELFGE--------------LPPQIILVGHSMGGAIAVHTAASKTL-----PSLAGLVVI 178 (343)
T ss_pred hhcCHHHHHHHHHHHHHHHhcc--------------CCCceEEEeccccchhhhhhhhhhhc-----hhhhceEEE
Confidence 344567888777766532 34679999999999999888765322 236666653
No 97
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.42 E-value=2.8e-11 Score=116.72 Aligned_cols=198 Identities=16% Similarity=0.100 Sum_probs=119.4
Q ss_pred HHHHhcCcEEEeecCCCCCCCC------CCcchhhHHHHHHHHHHhcCCCC--------CcccccccCCCccEEEEeech
Q 043192 95 TLVSHAKIIAVSVDYRRAPEDP------VPAAHEDSWTALKWVASHANGRG--------PEDWLKTYADFQKVILSGDSA 160 (316)
Q Consensus 95 ~l~~~~g~~v~~~d~r~~~~~~------~~~~~~d~~~~~~~l~~~~~~~~--------~~~~~~~~~d~~~i~l~G~S~ 160 (316)
..+.++||+|+.+|.|+..++. .+...+|..++++||..+...+- .++| . ..+|+++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~W----s-nGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADW----S-NGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCC----C-CCeeEEEEEcH
Confidence 3445559999999999865432 14456899999999996532110 0223 2 37999999999
Q ss_pred HHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCC--CCC-Cccccc--------------------chhhhh
Q 043192 161 GGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEP--YVP-EYWTTI--------------------IDEPWQ 217 (316)
Q Consensus 161 GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~--~~~-~~~~~~--------------------~~~~~~ 217 (316)
||.+++.+|... ++.++++|..+++.+..+...... ..+ ...... ....+.
T Consensus 348 ~G~~~~~aAa~~------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~ 421 (767)
T PRK05371 348 LGTLPNAVATTG------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACE 421 (767)
T ss_pred HHHHHHHHHhhC------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHH
Confidence 999999998875 346899999887754322111100 000 000000 000011
Q ss_pred hhCCCC---C----CCCCCc---cCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCC
Q 043192 218 IARPDT---S----GLDDPI---INPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGE 285 (316)
Q Consensus 218 ~~~~~~---~----~~~~~~---~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~ 285 (316)
...... . ...+++ .++.. .+.++.+ |+|++||..|..+. ++.+++++|++.|. +.++++.++
T Consensus 422 ~~~~~~~~~~~~~~~~y~~fW~~rn~~~--~~~kIkv-PvLlIhGw~D~~V~~~~s~~ly~aL~~~g~--pkkL~l~~g- 495 (767)
T PRK05371 422 KLLAELTAAQDRKTGDYNDFWDDRNYLK--DADKIKA-SVLVVHGLNDWNVKPKQVYQWWDALPENGV--PKKLFLHQG- 495 (767)
T ss_pred HHHhhhhhhhhhcCCCccHHHHhCCHhh--HhhCCCC-CEEEEeeCCCCCCChHHHHHHHHHHHhcCC--CeEEEEeCC-
Confidence 000000 0 000000 11111 4567777 99999999999885 67889999999887 788877776
Q ss_pred cccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 286 THVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 286 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+|..... ....++.+.+.+|+..+
T Consensus 496 ~H~~~~~----~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 496 GHVYPNN----WQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CccCCCc----hhHHHHHHHHHHHHHhc
Confidence 6865421 23456677777887654
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.41 E-value=1.4e-11 Score=98.45 Aligned_cols=183 Identities=17% Similarity=0.146 Sum_probs=98.8
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCc--EEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccccc
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKI--IAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTY 147 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~--~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 147 (316)
.++|+||- ..++.+ .-...+++.+++.+. .+..++.+.. .+++...+.-+.+.
T Consensus 1 ~ilYlHGF---~Ssp~S-~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------p~~a~~~l~~~i~~------------- 55 (187)
T PF05728_consen 1 MILYLHGF---NSSPQS-FKAQALKQYFAEHGPDIQYPCPDLPPF--------PEEAIAQLEQLIEE------------- 55 (187)
T ss_pred CeEEecCC---CCCCCC-HHHHHHHHHHHHhCCCceEECCCCCcC--------HHHHHHHHHHHHHh-------------
Confidence 37999992 223332 223445555555553 3444443322 34444444444443
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCC
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLD 227 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (316)
...+.+.|+|.||||..|..++.++. +++ +++.|.+.....+....-..... +........
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~~--------~~a-vLiNPav~p~~~l~~~iG~~~~~----------~~~e~~~~~ 116 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERYG--------LPA-VLINPAVRPYELLQDYIGEQTNP----------YTGESYELT 116 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHhC--------CCE-EEEcCCCCHHHHHHHhhCccccC----------CCCccceec
Confidence 23345999999999999999998862 454 88899886544332211110000 000000000
Q ss_pred CCccCCCCCCcc--cCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHH
Q 043192 228 DPIINPVADPKL--SSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKT 305 (316)
Q Consensus 228 ~~~~~~~~~~~~--~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 305 (316)
...+........ ..-+. ++++++++.|.+++..+. .++.+ .+..++.+|.+|.|..+ ++.+..
T Consensus 117 ~~~~~~l~~l~~~~~~~~~-~~lvll~~~DEvLd~~~a-~~~~~------~~~~~i~~ggdH~f~~f-------~~~l~~ 181 (187)
T PF05728_consen 117 EEHIEELKALEVPYPTNPE-RYLVLLQTGDEVLDYREA-VAKYR------GCAQIIEEGGDHSFQDF-------EEYLPQ 181 (187)
T ss_pred hHhhhhcceEeccccCCCc-cEEEEEecCCcccCHHHH-HHHhc------CceEEEEeCCCCCCccH-------HHHHHH
Confidence 000000000011 11233 899999999999987442 33333 34555678889988854 577888
Q ss_pred HHHHHh
Q 043192 306 TVDFIH 311 (316)
Q Consensus 306 i~~fl~ 311 (316)
|++|+.
T Consensus 182 i~~f~~ 187 (187)
T PF05728_consen 182 IIAFLQ 187 (187)
T ss_pred HHHhhC
Confidence 888873
No 99
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.40 E-value=2.1e-13 Score=115.60 Aligned_cols=201 Identities=16% Similarity=0.221 Sum_probs=115.8
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcC-CcccccCcchhhhHHHHHHHHHhcC---cEEEeecCCCCC--CCCCC----
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHG-GAFIFENAFSLTYHAYMNTLVSHAK---IIAVSVDYRRAP--EDPVP---- 118 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHG-gg~~~g~~~~~~~~~~~~~l~~~~g---~~v~~~d~r~~~--~~~~~---- 118 (316)
+....+.||+|+++...+++|||+++|| ++|.... .....+.++..+.+ .++++++..... ...+.
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~----~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~ 80 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNG----NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAG 80 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHH----HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccc----hHHHHHHHHHHhCCCCceEEEEEecccccccccccccccc
Confidence 3467889999999766789999999999 4443211 23344555556533 445555433221 00010
Q ss_pred --------c---chhh--HHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCcccee
Q 043192 119 --------A---AHED--SWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGI 185 (316)
Q Consensus 119 --------~---~~~d--~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~ 185 (316)
. ...+ ....+.++.++. .+++.+.+|+|+||||..|+.++.++++ .+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~el~p~i~~~~-----------~~~~~~~~i~G~S~GG~~Al~~~l~~Pd------~F~~~ 143 (251)
T PF00756_consen 81 SSRRADDSGGGDAYETFLTEELIPYIEANY-----------RTDPDRRAIAGHSMGGYGALYLALRHPD------LFGAV 143 (251)
T ss_dssp TTCBCTSTTTHHHHHHHHHTHHHHHHHHHS-----------SEEECCEEEEEETHHHHHHHHHHHHSTT------TESEE
T ss_pred cccccccCCCCcccceehhccchhHHHHhc-----------ccccceeEEeccCCCcHHHHHHHHhCcc------ccccc
Confidence 0 1111 124456666664 2444559999999999999999999855 69999
Q ss_pred EEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcccc-------
Q 043192 186 CLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLR------- 258 (316)
Q Consensus 186 i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~------- 258 (316)
+++||.++.... ++.......|... ++....... .....+. ++++.+|+.|...
T Consensus 144 ~~~S~~~~~~~~---------~w~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~-~i~l~~G~~d~~~~~~~~~~ 204 (251)
T PF00756_consen 144 IAFSGALDPSPS---------LWGPSDDEAWKEN--------DPFDLIKAL-SQKKKPL-RIYLDVGTKDEFGGWEDSAQ 204 (251)
T ss_dssp EEESEESETTHC---------HHHHSTCGHHGGC--------HHHHHHHHH-HHTTSEE-EEEEEEETTSTTHHCSHHHH
T ss_pred cccCcccccccc---------ccCcCCcHHhhhc--------cHHHHhhhh-hcccCCC-eEEEEeCCCCcccccccCHH
Confidence 999998755410 0000000000000 000000000 0011112 7899999999722
Q ss_pred -----chHHHHHHHHHhCCCCcccEEEEeCCCccccccc
Q 043192 259 -----GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLL 292 (316)
Q Consensus 259 -----~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~ 292 (316)
.....+.+.|+..|+ +..+..++| +|.+..+
T Consensus 205 ~~~~~~~~~~~~~~l~~~g~--~~~~~~~~G-~H~~~~W 240 (251)
T PF00756_consen 205 ILQFLANNRELAQLLKAKGI--PHTYHVFPG-GHDWAYW 240 (251)
T ss_dssp HHHHHHHHHHHHHHCCCEEC--TTESEEEHS-ESSHHHH
T ss_pred HHHHHHHhHhhHHHHHHcCC--CceEEEecC-ccchhhH
Confidence 234556666777777 788999995 7977754
No 100
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.40 E-value=2.9e-11 Score=95.33 Aligned_cols=186 Identities=14% Similarity=0.128 Sum_probs=116.3
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-------CCcchhhHHHHHHHHHHhcCCCC
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-------VPAAHEDSWTALKWVASHANGRG 139 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~~~~~~ 139 (316)
..-++|++|| ..-.... .+...++..+++.|+.++.+|+++.+++. +....+|+..+++++.+..
T Consensus 32 s~e~vvlcHG---frS~Kn~-~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n---- 103 (269)
T KOG4667|consen 32 STEIVVLCHG---FRSHKNA-IIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN---- 103 (269)
T ss_pred CceEEEEeec---cccccch-HHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc----
Confidence 4468999999 3333332 34444555566679999999999876542 3455799999999997632
Q ss_pred CcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhh-
Q 043192 140 PEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQI- 218 (316)
Q Consensus 140 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 218 (316)
..--+|+|||-||.+++.++.++.+ +.-+|-.++-++......+...... ..+..+.
T Consensus 104 ----------r~v~vi~gHSkGg~Vvl~ya~K~~d-------~~~viNcsGRydl~~~I~eRlg~~~-----l~~ike~G 161 (269)
T KOG4667|consen 104 ----------RVVPVILGHSKGGDVVLLYASKYHD-------IRNVINCSGRYDLKNGINERLGEDY-----LERIKEQG 161 (269)
T ss_pred ----------eEEEEEEeecCccHHHHHHHHhhcC-------chheEEcccccchhcchhhhhcccH-----HHHHHhCC
Confidence 2335789999999999999999754 6667777776665443321110000 0000000
Q ss_pred h--CCCCCCCCCC-------------ccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEE
Q 043192 219 A--RPDTSGLDDP-------------IINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSE 281 (316)
Q Consensus 219 ~--~~~~~~~~~~-------------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~ 281 (316)
+ .+...+.... .+.+... .+. ..| |+|-+||..|.+++ .+.+|++.+. +.++.+
T Consensus 162 fid~~~rkG~y~~rvt~eSlmdrLntd~h~acl-kId-~~C-~VLTvhGs~D~IVPve~AkefAk~i~------nH~L~i 232 (269)
T KOG4667|consen 162 FIDVGPRKGKYGYRVTEESLMDRLNTDIHEACL-KID-KQC-RVLTVHGSEDEIVPVEDAKEFAKIIP------NHKLEI 232 (269)
T ss_pred ceecCcccCCcCceecHHHHHHHHhchhhhhhc-CcC-ccC-ceEEEeccCCceeechhHHHHHHhcc------CCceEE
Confidence 0 0000000000 0111111 222 235 99999999998874 7788888776 579999
Q ss_pred eCCCcccccc
Q 043192 282 IMGETHVFHL 291 (316)
Q Consensus 282 ~~~~~H~~~~ 291 (316)
+||++|.|..
T Consensus 233 IEgADHnyt~ 242 (269)
T KOG4667|consen 233 IEGADHNYTG 242 (269)
T ss_pred ecCCCcCccc
Confidence 9999999984
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.39 E-value=3.9e-12 Score=109.07 Aligned_cols=212 Identities=15% Similarity=0.115 Sum_probs=124.2
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHH------HHHHhcCcEEEeecCCCCCCCC------
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMN------TLVSHAKIIAVSVDYRRAPEDP------ 116 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~------~l~~~~g~~v~~~d~r~~~~~~------ 116 (316)
|-.+.+++|+| +...+++.|+||..|+.+. +............ ..+.++||+|+..|.|+...+.
T Consensus 2 Gv~L~adv~~P-~~~~~~~~P~il~~tpY~~--~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 2 GVRLAADVYRP-GADGGGPFPVILTRTPYGK--GDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp S-EEEEEEEEE---TTSSSEEEEEEEESSTC--TC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCEEEEEEEec-CCCCCCcccEEEEccCcCC--CCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 45788999999 4333589999999998552 1101000000001 1145569999999999865432
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 117 VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 117 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
.+...+|..++++|+.++. -...||+++|.|++|..++.+|... ++.+++++..++..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qp------------ws~G~VGm~G~SY~G~~q~~~A~~~------~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQP------------WSNGKVGMYGISYGGFTQWAAAARR------PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCT------------TEEEEEEEEEETHHHHHHHHHHTTT-------TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCC------------CCCCeEEeeccCHHHHHHHHHHhcC------CCCceEEEecccCCcccc
Confidence 3445789999999999974 3346999999999999999999854 457999999888777654
Q ss_pred CCCCCCCCCCcccccchhhh---------------------h----------hhCCCC------------CCCCCCccCC
Q 043192 197 PIPGEPYVPEYWTTIIDEPW---------------------Q----------IARPDT------------SGLDDPIINP 233 (316)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~---------------------~----------~~~~~~------------~~~~~~~~~~ 233 (316)
..... ...+ .......| . ...... ....+++...
T Consensus 141 ~~~~~--gG~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 217 (272)
T PF02129_consen 141 DSIYP--GGAF-RLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQE 217 (272)
T ss_dssp TSSEE--TTEE-BCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHT
T ss_pred cchhc--CCcc-cccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHh
Confidence 21000 0000 00000000 0 000000 0001111110
Q ss_pred CCC-CcccCCCCCcEEEEEcCCc-cccchHHHHHHHHHhCC-CCcccEEEEeCCCccc
Q 043192 234 VAD-PKLSSLGCNRLLVFVAQLD-LLRGRGLYYVTKLKESG-WKGDAKVSEIMGETHV 288 (316)
Q Consensus 234 ~~~-~~~~~~~~~P~li~~G~~D-~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~H~ 288 (316)
... ..+.++.+ |+|++.|-.| .+...+.+.+++|++.+ . +.++++-|. .|+
T Consensus 218 ~~~~~~~~~i~v-P~l~v~Gw~D~~~~~~~~~~~~~l~~~~~~--~~~Liigpw-~H~ 271 (272)
T PF02129_consen 218 RSPSERLDKIDV-PVLIVGGWYDTLFLRGALRAYEALRAPGSK--PQRLIIGPW-THG 271 (272)
T ss_dssp TBHHHHHGG--S-EEEEEEETTCSSTSHHHHHHHHHHCTTSTC---EEEEEESE-STT
T ss_pred CChHHHHhhCCC-CEEEecccCCcccchHHHHHHHHhhcCCCC--CCEEEEeCC-CCC
Confidence 000 03467777 9999999999 56678888999998877 4 568888776 573
No 102
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.38 E-value=2.3e-13 Score=105.98 Aligned_cols=206 Identities=16% Similarity=0.176 Sum_probs=132.3
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-----CCc--chhhHHHHHHHHHHhcCCCCCcc
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP-----VPA--AHEDSWTALKWVASHANGRGPED 142 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~~~--~~~d~~~~~~~l~~~~~~~~~~~ 142 (316)
.|+++.| ..|+... .+...+..+.....+.++..|-++.+.+. ++. ..+|...+++.+..
T Consensus 44 ~iLlipG---alGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~a--------- 110 (277)
T KOG2984|consen 44 YILLIPG---ALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEA--------- 110 (277)
T ss_pred eeEeccc---ccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHH---------
Confidence 5777877 3455433 46677777777666899999988775432 222 25788888887765
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCC-------------CCCCCCCCC---
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAP-------------IPGEPYVPE--- 206 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-------------~~~~~~~~~--- 206 (316)
++..++.|+|+|-||..|+.+|.++++ .+..+|++....-.... +......+.
T Consensus 111 -----Lk~~~fsvlGWSdGgiTalivAak~~e------~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~ 179 (277)
T KOG2984|consen 111 -----LKLEPFSVLGWSDGGITALIVAAKGKE------KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDH 179 (277)
T ss_pred -----hCCCCeeEeeecCCCeEEEEeeccChh------hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHh
Confidence 456899999999999999999999854 58888887764321110 000000000
Q ss_pred cccccchhhhhhhCCCC---CCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc-hHHHHHHHHHhCCCCcccEEEEe
Q 043192 207 YWTTIIDEPWQIARPDT---SGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG-RGLYYVTKLKESGWKGDAKVSEI 282 (316)
Q Consensus 207 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~-~~~~~~~~l~~~g~~~~~~~~~~ 282 (316)
.-...+...|..+.... ....|-.+ ....+.+++| |+||+||+.|+++. ...-|...+.. -+++.++
T Consensus 180 Yg~e~f~~~wa~wvD~v~qf~~~~dG~f---Cr~~lp~vkc-Ptli~hG~kDp~~~~~hv~fi~~~~~-----~a~~~~~ 250 (277)
T KOG2984|consen 180 YGPETFRTQWAAWVDVVDQFHSFCDGRF---CRLVLPQVKC-PTLIMHGGKDPFCGDPHVCFIPVLKS-----LAKVEIH 250 (277)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhcCCCch---HhhhcccccC-CeeEeeCCcCCCCCCCCccchhhhcc-----cceEEEc
Confidence 11222333333332211 01111111 1115678889 99999999999883 44555555554 5799999
Q ss_pred CCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 283 MGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 283 ~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|...|.|.. ..++++...+.+||++.
T Consensus 251 peGkHn~hL-----rya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 251 PEGKHNFHL-----RYAKEFNKLVLDFLKST 276 (277)
T ss_pred cCCCcceee-----echHHHHHHHHHHHhcc
Confidence 999998885 34589999999999875
No 103
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.35 E-value=1.1e-10 Score=96.98 Aligned_cols=132 Identities=21% Similarity=0.235 Sum_probs=90.2
Q ss_pred eeEEecC-CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeec-CCCC--C----
Q 043192 42 KDIIYSS-EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVD-YRRA--P---- 113 (316)
Q Consensus 42 ~~v~~~~-~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d-~r~~--~---- 113 (316)
+..++.+ +.+..+.+|.|.+. +...|+||++||++ ++........=..+++++.||.|+.|| |..+ +
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~--~~~apLvv~LHG~~---~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~ 110 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGL--PSGAPLVVVLHGSG---GSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCG 110 (312)
T ss_pred CccccccCCCccceEEEcCCCC--CCCCCEEEEEecCC---CChHHhhcccchhhhhcccCcEEECcCccccccCCCccc
Confidence 3444444 44788999999987 35559999999966 333322222233688899999999995 3321 1
Q ss_pred CC----CCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEec
Q 043192 114 ED----PVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLF 189 (316)
Q Consensus 114 ~~----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 189 (316)
.. .-...++|+....+.+.....+++ +|+.||+|.|.|.||.|+..+++.+++ .+.++..++
T Consensus 111 ~~~~p~~~~~g~ddVgflr~lva~l~~~~g--------idp~RVyvtGlS~GG~Ma~~lac~~p~------~faa~A~VA 176 (312)
T COG3509 111 NWFGPADRRRGVDDVGFLRALVAKLVNEYG--------IDPARVYVTGLSNGGRMANRLACEYPD------IFAAIAPVA 176 (312)
T ss_pred ccCCcccccCCccHHHHHHHHHHHHHHhcC--------cCcceEEEEeeCcHHHHHHHHHhcCcc------cccceeeee
Confidence 11 112335566555555555555554 999999999999999999999999855 577777777
Q ss_pred ccc
Q 043192 190 PYF 192 (316)
Q Consensus 190 p~~ 192 (316)
+..
T Consensus 177 g~~ 179 (312)
T COG3509 177 GLL 179 (312)
T ss_pred ccc
Confidence 655
No 104
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.35 E-value=6.3e-11 Score=96.43 Aligned_cols=130 Identities=18% Similarity=0.259 Sum_probs=95.7
Q ss_pred CceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHH
Q 043192 50 HNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALK 129 (316)
Q Consensus 50 ~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~ 129 (316)
...++.|+.|... +.+|+|+|+||-. .- ...|...++.++. +||+|++++....-.......+++..++++
T Consensus 31 pPkpLlI~tP~~~---G~yPVilF~HG~~--l~---ns~Ys~lL~HIAS-HGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 31 PPKPLLIVTPSEA---GTYPVILFLHGFN--LY---NSFYSQLLAHIAS-HGFIVVAPQLYTLFPPDGQDEIKSAASVIN 101 (307)
T ss_pred CCCCeEEecCCcC---CCccEEEEeechh--hh---hHHHHHHHHHHhh-cCeEEEechhhcccCCCchHHHHHHHHHHH
Confidence 3678899999876 7999999999922 22 2245566666655 599999998553222234555678889999
Q ss_pred HHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 130 WVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
||.+....+.+.+- ..|..+++++|||.||-.|..+|+.+.. ..++.++|.+.|+....
T Consensus 102 WL~~gL~~~Lp~~V---~~nl~klal~GHSrGGktAFAlALg~a~----~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 102 WLPEGLQHVLPENV---EANLSKLALSGHSRGGKTAFALALGYAT----SLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHhhhhhhCCCCc---ccccceEEEeecCCccHHHHHHHhcccc----cCchhheecccccCCCC
Confidence 99887554432222 4788899999999999999999998763 45899999999987543
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.32 E-value=4.5e-10 Score=84.51 Aligned_cols=183 Identities=14% Similarity=0.157 Sum_probs=110.1
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC-----CC----CCCCcchhhHHHHHHHHHHhcCC
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA-----PE----DPVPAAHEDSWTALKWVASHANG 137 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-----~~----~~~~~~~~d~~~~~~~l~~~~~~ 137 (316)
..-+||+-||.|-...|. .....+..++.+ |+.|+.+++..- +. ..-.+.......++..|+..
T Consensus 13 ~~~tilLaHGAGasmdSt---~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~--- 85 (213)
T COG3571 13 APVTILLAHGAGASMDST---SMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG--- 85 (213)
T ss_pred CCEEEEEecCCCCCCCCH---HHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc---
Confidence 345788999987554443 355555666554 999999985521 11 11111223334444445443
Q ss_pred CCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEec-ccccCCCCCCCCCCCCCcccccchhhh
Q 043192 138 RGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLF-PYFWGSAPIPGEPYVPEYWTTIIDEPW 216 (316)
Q Consensus 138 ~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (316)
.+..+.++.|+||||.++..++.+... .|+++++++ |+.-.... +.
T Consensus 86 ----------l~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGKP--e~--------------- 132 (213)
T COG3571 86 ----------LAEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGKP--EQ--------------- 132 (213)
T ss_pred ----------ccCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCCc--cc---------------
Confidence 556789999999999999999876532 377877654 54422111 00
Q ss_pred hhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccC---
Q 043192 217 QIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLN--- 293 (316)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~--- 293 (316)
.....+.++++ |+||++|+.|.+-...+- +...- +.+.+++.++++.|..-...
T Consensus 133 -----------------~Rt~HL~gl~t-Ptli~qGtrD~fGtr~~V-a~y~l----s~~iev~wl~~adHDLkp~k~vs 189 (213)
T COG3571 133 -----------------LRTEHLTGLKT-PTLITQGTRDEFGTRDEV-AGYAL----SDPIEVVWLEDADHDLKPRKLVS 189 (213)
T ss_pred -----------------chhhhccCCCC-CeEEeecccccccCHHHH-Hhhhc----CCceEEEEeccCccccccccccc
Confidence 00015667777 999999999997643321 12211 22789999999999766321
Q ss_pred --CCcHHHHHHHHHHHHHHhc
Q 043192 294 --PSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 294 --~~~~~~~~~~~~i~~fl~~ 312 (316)
..........+.|..|+..
T Consensus 190 gls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 190 GLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cccHHHHHHHHHHHHHHHHhh
Confidence 1223334455667777654
No 106
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.31 E-value=5.2e-11 Score=108.49 Aligned_cols=224 Identities=15% Similarity=0.128 Sum_probs=146.4
Q ss_pred CceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC
Q 043192 38 HVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED 115 (316)
Q Consensus 38 ~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~ 115 (316)
...++-+..+. +-.+++.+++-++...+++.|++++..|.....-++ .+...+-.|+.+ |++.....-|++++.
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p---~Fs~~~lSLlDR-GfiyAIAHVRGGgel 491 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDP---SFSIARLSLLDR-GFVYAIAHVRGGGEL 491 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCc---CcccceeeeecC-ceEEEEEEeeccccc
Confidence 34445555553 347889988888765578899999999965443333 233333455555 998888888887643
Q ss_pred C-----------CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccce
Q 043192 116 P-----------VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDG 184 (316)
Q Consensus 116 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~ 184 (316)
. -...+.|..++.++|.++. ..++++|+++|-|+||+++..++...| ..+++
T Consensus 492 G~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g-----------~~~~~~i~a~GGSAGGmLmGav~N~~P------~lf~~ 554 (682)
T COG1770 492 GRAWYEDGKLLNKKNTFTDFIAAARHLVKEG-----------YTSPDRIVAIGGSAGGMLMGAVANMAP------DLFAG 554 (682)
T ss_pred ChHHHHhhhhhhccccHHHHHHHHHHHHHcC-----------cCCccceEEeccCchhHHHHHHHhhCh------hhhhh
Confidence 2 2445799999999999986 588899999999999999999998864 47999
Q ss_pred eEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCC---CccCCCCCCcccCCCCCcEEEEEcCCccccc--
Q 043192 185 ICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDD---PIINPVADPKLSSLGCNRLLVFVAQLDLLRG-- 259 (316)
Q Consensus 185 ~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~-- 259 (316)
+|+..|++|.-....... .+....-|..+-+....... ..+||+....-...| ++|++.|..|+-|.
T Consensus 555 iiA~VPFVDvltTMlD~s------lPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP--~ilv~~Gl~D~rV~Yw 626 (682)
T COG1770 555 IIAQVPFVDVLTTMLDPS------LPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYP--AILVTTGLNDPRVQYW 626 (682)
T ss_pred eeecCCccchhhhhcCCC------CCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCC--ceEEEccccCCccccc
Confidence 999999997654321110 01111111111111100000 124455532333445 99999999998774
Q ss_pred hHHHHHHHHHhCCCCc-ccEEEEeCCCccccc
Q 043192 260 RGLYYVTKLKESGWKG-DAKVSEIMGETHVFH 290 (316)
Q Consensus 260 ~~~~~~~~l~~~g~~~-~~~~~~~~~~~H~~~ 290 (316)
+..++.++|++.+..+ +.-+..-..+||+-.
T Consensus 627 EpAKWvAkLR~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 627 EPAKWVAKLRELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred hHHHHHHHHhhcccCCCcEEEEecccccCCCC
Confidence 6778999999887632 233444478899644
No 107
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.30 E-value=1.5e-10 Score=91.54 Aligned_cols=129 Identities=18% Similarity=0.187 Sum_probs=94.4
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCC-CCC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAP-IPG 200 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-~~~ 200 (316)
....+.+.+|.++....| ++.+||++.|+||||.+|+..+..++. .+.+++..+++...... ...
T Consensus 72 ~~aa~~i~~Li~~e~~~G--------i~~~rI~igGfs~G~a~aL~~~~~~~~------~l~G~~~~s~~~p~~~~~~~~ 137 (206)
T KOG2112|consen 72 HRAADNIANLIDNEPANG--------IPSNRIGIGGFSQGGALALYSALTYPK------ALGGIFALSGFLPRASIGLPG 137 (206)
T ss_pred HHHHHHHHHHHHHHHHcC--------CCccceeEcccCchHHHHHHHHhcccc------ccceeeccccccccchhhccC
Confidence 344555666666665554 999999999999999999999998733 47888887777642211 100
Q ss_pred CCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccE
Q 043192 201 EPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAK 278 (316)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~ 278 (316)
. .+ ... .. |++..||+.|++++ -..+..+.|+.++. +++
T Consensus 138 ~------------------~~----------------~~~-~~--~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~--~~~ 178 (206)
T KOG2112|consen 138 W------------------LP----------------GVN-YT--PILLCHGTADPLVPFRFGEKSAQFLKSLGV--RVT 178 (206)
T ss_pred C------------------cc----------------ccC-cc--hhheecccCCceeehHHHHHHHHHHHHcCC--cee
Confidence 0 00 000 12 89999999999985 67888999999999 799
Q ss_pred EEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 279 VSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 279 ~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
++-|+|..|... .+-++++..|+++
T Consensus 179 f~~y~g~~h~~~---------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 179 FKPYPGLGHSTS---------PQELDDLKSWIKT 203 (206)
T ss_pred eeecCCcccccc---------HHHHHHHHHHHHH
Confidence 999999999544 4667778888765
No 108
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.30 E-value=1.1e-10 Score=105.25 Aligned_cols=226 Identities=15% Similarity=0.096 Sum_probs=152.4
Q ss_pred CCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC-----------
Q 043192 48 SEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP----------- 116 (316)
Q Consensus 48 ~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~----------- 116 (316)
+|.++++-+.. ++...+ +.|++|+-+||-...-.+ .+...+..++.+ |-..+..+.|++++..
T Consensus 403 DGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP---~fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 403 DGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTP---RFSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred CCccccEEEEe-cCCcCC-CCceEEEeccccccccCC---ccchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHhhhc
Confidence 35578888887 775545 789999999865444433 355555555555 7777788999887642
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 117 VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 117 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
-...++|..++.+.|.++. ...++++++.|-|-||.+......+. |..+.++++-.|.+|+..
T Consensus 477 rq~vfdDf~AVaedLi~rg-----------itspe~lgi~GgSNGGLLvg~alTQr------PelfgA~v~evPllDMlR 539 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRG-----------ITSPEKLGIQGGSNGGLLVGAALTQR------PELFGAAVCEVPLLDMLR 539 (648)
T ss_pred chhhhHHHHHHHHHHHHhC-----------CCCHHHhhhccCCCCceEEEeeeccC------hhhhCceeeccchhhhhh
Confidence 1234689999999999886 47789999999999999988888877 457999999999987643
Q ss_pred CCCCCCCCCCcccccchhhhhhhCCCCCCCCC----CccCCCCCCcc-cCCCCCcEEEEEcCCcccc-c-hHHHHHHHHH
Q 043192 197 PIPGEPYVPEYWTTIIDEPWQIARPDTSGLDD----PIINPVADPKL-SSLGCNRLLVFVAQLDLLR-G-RGLYYVTKLK 269 (316)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~P~li~~G~~D~~~-~-~~~~~~~~l~ 269 (316)
.- .. .. ...|..-+++.....+ ..+||+...+. .+.| |+||..+.+|.-| + ++++|+.+|+
T Consensus 540 Yh-~l-------~a--G~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP--~~LITTs~~DDRVHPaHarKfaa~L~ 607 (648)
T COG1505 540 YH-LL-------TA--GSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYP--PTLITTSLHDDRVHPAHARKFAAKLQ 607 (648)
T ss_pred hc-cc-------cc--chhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCC--CeEEEcccccccccchHHHHHHHHHH
Confidence 21 11 01 1112222222111111 13455553222 3456 9999999999755 3 8999999999
Q ss_pred hCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 270 ESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 270 ~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
+.|. ++-+.+--++||+-. .+. .+.......+..||.+.
T Consensus 608 e~~~--pv~~~e~t~gGH~g~--~~~-~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 608 EVGA--PVLLREETKGGHGGA--APT-AEIARELADLLAFLLRT 646 (648)
T ss_pred hcCC--ceEEEeecCCcccCC--CCh-HHHHHHHHHHHHHHHHh
Confidence 9997 777777778899655 333 33335555677787653
No 109
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.30 E-value=4.5e-10 Score=91.20 Aligned_cols=211 Identities=14% Similarity=0.030 Sum_probs=122.3
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKT 146 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 146 (316)
..+-++.+|=.| |++. .++.|..++-. .+.++.+.|++.+.........|+.+..+-+.......
T Consensus 6 ~~~~L~cfP~AG---Gsa~--~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~-------- 70 (244)
T COG3208 6 ARLRLFCFPHAG---GSAS--LFRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPP-------- 70 (244)
T ss_pred CCceEEEecCCC---CCHH--HHHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccc--------
Confidence 445566666433 3333 56677765544 47889999998877666777888998888888775310
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCC-CC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDT-SG 225 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 225 (316)
.-....++.||||||.+|..+|.+....+. .+.++++.+.-.-.... ...........+-.....+.+.. .-
T Consensus 71 -~~d~P~alfGHSmGa~lAfEvArrl~~~g~---~p~~lfisg~~aP~~~~---~~~i~~~~D~~~l~~l~~lgG~p~e~ 143 (244)
T COG3208 71 -LLDAPFALFGHSMGAMLAFEVARRLERAGL---PPRALFISGCRAPHYDR---GKQIHHLDDADFLADLVDLGGTPPEL 143 (244)
T ss_pred -cCCCCeeecccchhHHHHHHHHHHHHHcCC---CcceEEEecCCCCCCcc---cCCccCCCHHHHHHHHHHhCCCChHH
Confidence 223579999999999999999999877653 36666654432211110 00000011111111111111111 00
Q ss_pred CCCC---------------ccCCCCCCcccCCCCCcEEEEEcCCccccch--HHHHHHHHHhCCCCcccEEEEeCCCccc
Q 043192 226 LDDP---------------IINPVADPKLSSLGCNRLLVFVAQLDLLRGR--GLYYVTKLKESGWKGDAKVSEIMGETHV 288 (316)
Q Consensus 226 ~~~~---------------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~~H~ 288 (316)
..|+ .+..+....-..+.+ |+.++.|++|..+.. ...+.+..+ . ..++..++| +|.
T Consensus 144 led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~-pi~~~~G~~D~~vs~~~~~~W~~~t~---~--~f~l~~fdG-gHF 216 (244)
T COG3208 144 LEDPELMALFLPILRADFRALESYRYPPPAPLAC-PIHAFGGEKDHEVSRDELGAWREHTK---G--DFTLRVFDG-GHF 216 (244)
T ss_pred hcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCc-ceEEeccCcchhccHHHHHHHHHhhc---C--CceEEEecC-cce
Confidence 1111 011111112234667 999999999998853 333333332 2 789999999 897
Q ss_pred ccccCCCcHHHHHHHHHHHHHHh
Q 043192 289 FHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 289 ~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
|.. ....++++.|.+.+.
T Consensus 217 fl~-----~~~~~v~~~i~~~l~ 234 (244)
T COG3208 217 FLN-----QQREEVLARLEQHLA 234 (244)
T ss_pred ehh-----hhHHHHHHHHHHHhh
Confidence 763 444677777777774
No 110
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.30 E-value=3.2e-10 Score=104.58 Aligned_cols=132 Identities=11% Similarity=0.114 Sum_probs=81.9
Q ss_pred eEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCc---ccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC---
Q 043192 43 DIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGA---FIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP--- 116 (316)
Q Consensus 43 ~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg---~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--- 116 (316)
+|.+.+ ..+.+.-|.|... ....+.||++||-. |...-. ...+++..++++ ||.|+++|++..+...
T Consensus 166 ~VV~~~-~~~eLi~Y~P~t~--~~~~~PlLiVp~~i~k~yilDL~---p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~ 238 (532)
T TIGR01838 166 AVVFEN-ELFQLIQYEPTTE--TVHKTPLLIVPPWINKYYILDLR---PQNSLVRWLVEQ-GHTVFVISWRNPDASQADK 238 (532)
T ss_pred eEEEEC-CcEEEEEeCCCCC--cCCCCcEEEECcccccceeeecc---cchHHHHHHHHC-CcEEEEEECCCCCcccccC
Confidence 555553 3577778877654 23456689999832 111100 123677777665 9999999999755332
Q ss_pred -CCcch-hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 117 -VPAAH-EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 117 -~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
+.... +++..+++.+.+. .+.+++.++||||||.++..++....... .+.+++++++++..++.
T Consensus 239 ~~ddY~~~~i~~al~~v~~~-------------~g~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 239 TFDDYIRDGVIAALEVVEAI-------------TGEKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDF 304 (532)
T ss_pred ChhhhHHHHHHHHHHHHHHh-------------cCCCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCC
Confidence 22223 3477778888765 45689999999999998644222111100 02358999988877765
Q ss_pred C
Q 043192 195 S 195 (316)
Q Consensus 195 ~ 195 (316)
.
T Consensus 305 ~ 305 (532)
T TIGR01838 305 S 305 (532)
T ss_pred C
Confidence 4
No 111
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.28 E-value=1.7e-11 Score=103.44 Aligned_cols=227 Identities=14% Similarity=0.090 Sum_probs=84.5
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC----CCCCCCCCcchhhHHHHHHHHHHhcCCCCCcc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR----RAPEDPVPAAHEDSWTALKWVASHANGRGPED 142 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~ 142 (316)
...+||||-|= ..|-. ...|..-++..+...+|.++.+..+ +.+..+.....+|+..+++||+.....
T Consensus 32 ~~~~llfIGGL--tDGl~-tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g----- 103 (303)
T PF08538_consen 32 APNALLFIGGL--TDGLL-TVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG----- 103 (303)
T ss_dssp SSSEEEEE--T--T--TT--STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEECCC--CCCCC-CCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-----
Confidence 44589999762 22222 2235555566667679999988755 334445566688999999999987311
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccc----------
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTII---------- 212 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~---------- 212 (316)
....++|+|||||.|..-++.++....... ....++|+|+.+|+.|.............+ ....
T Consensus 104 ----~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-~~~~VdG~ILQApVSDREa~~~~~~~~~~~-~~~v~~A~~~i~~g 177 (303)
T PF08538_consen 104 ----HFGREKIVLMGHSTGCQDVLHYLSSPNPSP-SRPPVDGAILQAPVSDREAILNFLGEREAY-EELVALAKELIAEG 177 (303)
T ss_dssp --------S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TTSTTTSHHH---H-HHHHHHHHHHHHCT
T ss_pred ----ccCCccEEEEecCCCcHHHHHHHhccCccc-cccceEEEEEeCCCCChhHhhhcccchHHH-HHHHHHHHHHHHcC
Confidence 135689999999999999999998765311 135799999999988654332211000000 0000
Q ss_pred ---------------------hhhhhhhCCCCCCCCCCccCCCCCC-----cccCCCCCcEEEEEcCCccccch---HHH
Q 043192 213 ---------------------DEPWQIARPDTSGLDDPIINPVADP-----KLSSLGCNRLLVFVAQLDLLRGR---GLY 263 (316)
Q Consensus 213 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~P~li~~G~~D~~~~~---~~~ 263 (316)
..+|..... ....|.+.|....+ .+.++.+ |+|++.+++|..++. -+.
T Consensus 178 ~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s--~~gdDD~FSSDL~de~l~~tfG~v~~-plLvl~Sg~DEyvP~~vdk~~ 254 (303)
T PF08538_consen 178 KGDEILPREFTPLVFYDTPITAYRFLSLAS--PGGDDDYFSSDLSDERLKKTFGKVSK-PLLVLYSGKDEYVPPWVDKEA 254 (303)
T ss_dssp -TT-GG----GGTTT-SS---HHHHHT-S---SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT----------
T ss_pred CCCceeeccccccccCCCcccHHHHHhccC--CCCcccccCCCCCHHHHHHHhccCCC-ceEEEecCCCceecccccccc
Confidence 000000000 01111111111111 4556667 999999999987742 234
Q ss_pred HHHHHHhCCCCc--ccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHh
Q 043192 264 YVTKLKESGWKG--DAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 264 ~~~~l~~~g~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~ 311 (316)
+.++++++-.+. ...--++||++|...... .....+..++.|..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~-~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPS-QAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccc-cccccccccccccccCC
Confidence 555554432110 123457899999776311 11124567888888875
No 112
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.27 E-value=9.2e-12 Score=117.35 Aligned_cols=132 Identities=26% Similarity=0.397 Sum_probs=100.1
Q ss_pred cCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC---------CCCC
Q 043192 47 SSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP---------EDPV 117 (316)
Q Consensus 47 ~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~---------~~~~ 117 (316)
.+++.+.+.+|.|......+ .||+||||||++..|+..... ......++.....+|+.+.||++. ..+.
T Consensus 92 ~sEDCLylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~-~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~g 169 (545)
T KOG1516|consen 92 GSEDCLYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFE-IISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPG 169 (545)
T ss_pred CcCCCceEEEeccCCCccCC-CCEEEEEeCCceeeccccchh-hcCchhccccCCEEEEEecccceeceeeecCCCCCCC
Confidence 34678999999998763222 899999999999998864321 122244555568999999999752 1234
Q ss_pred CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 118 PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 118 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
...+.|...+++|++++.+.+| .|+++|.|+|||+||..+..+......++ .++.+|.+|+..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FG--------Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~----LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFG--------GDPKNVTLFGHSAGAASVSLLTLSPHSRG----LFHKAISMSGNA 232 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcC--------CCCCeEEEEeechhHHHHHHHhcCHhhHH----HHHHHHhhcccc
Confidence 5567899999999999999997 99999999999999999988877543322 477777766643
No 113
>PRK05855 short chain dehydrogenase; Validated
Probab=99.27 E-value=6.9e-11 Score=112.32 Aligned_cols=85 Identities=20% Similarity=0.169 Sum_probs=54.7
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-----chhhHHHHHHHHHHhcCCCCCcc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-----AHEDSWTALKWVASHANGRGPED 142 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~~~~~ 142 (316)
.|.||++||.+ ++.. .|..++..+ .+ +|.|+++|+|+++.+..+. .+++....+..+.+..
T Consensus 25 ~~~ivllHG~~---~~~~--~w~~~~~~L-~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l------- 90 (582)
T PRK05855 25 RPTVVLVHGYP---DNHE--VWDGVAPLL-AD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV------- 90 (582)
T ss_pred CCeEEEEcCCC---chHH--HHHHHHHHh-hc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh-------
Confidence 57899999954 2222 466776666 43 8999999999887654221 1333333333332221
Q ss_pred cccccCCCccEEEEeechHHHHHHHHHHH
Q 043192 143 WLKTYADFQKVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 143 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 171 (316)
....+++|+||||||.+++.++.+
T Consensus 91 -----~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 91 -----SPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred -----CCCCcEEEEecChHHHHHHHHHhC
Confidence 112359999999999999888766
No 114
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.27 E-value=3.1e-10 Score=113.88 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=75.8
Q ss_pred eeeEEecCCCceEEEEEecCCCCC--CCCccEEEEEcCCcccccCcchhhhH-----HHHHHHHHhcCcEEEeecCCCCC
Q 043192 41 SKDIIYSSEHNLSARIYFPNNTNR--NQKLPLVVYFHGGAFIFENAFSLTYH-----AYMNTLVSHAKIIAVSVDYRRAP 113 (316)
Q Consensus 41 ~~~v~~~~~~~~~~~~~~P~~~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~-----~~~~~l~~~~g~~v~~~d~r~~~ 113 (316)
..+|.+.. +...+.-|.|...+. +...|.||++||.+- +.. .|+ +++..|.++ ||.|+++|+...+
T Consensus 39 p~~vv~~~-~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~---~~~--~~d~~~~~s~v~~L~~~-g~~v~~~d~G~~~ 111 (994)
T PRK07868 39 PFQIVESV-PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMM---SAD--MWDVTRDDGAVGILHRA-GLDPWVIDFGSPD 111 (994)
T ss_pred CCcEEEEc-CcEEEEEeCCCCccccccCCCCcEEEECCCCC---Ccc--ceecCCcccHHHHHHHC-CCEEEEEcCCCCC
Confidence 34556653 367788888765321 234578999999432 221 222 235555454 9999999975432
Q ss_pred CC--CC-CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 114 ED--PV-PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 114 ~~--~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
.. .. ....+++...++.+..-. ....+++.|+||||||.+++.++...++ .+++++++++.
T Consensus 112 ~~~~~~~~~l~~~i~~l~~~l~~v~-----------~~~~~~v~lvG~s~GG~~a~~~aa~~~~-----~~v~~lvl~~~ 175 (994)
T PRK07868 112 KVEGGMERNLADHVVALSEAIDTVK-----------DVTGRDVHLVGYSQGGMFCYQAAAYRRS-----KDIASIVTFGS 175 (994)
T ss_pred hhHcCccCCHHHHHHHHHHHHHHHH-----------HhhCCceEEEEEChhHHHHHHHHHhcCC-----CccceEEEEec
Confidence 11 11 122233333333332110 0113589999999999999999875432 25899988766
Q ss_pred cccC
Q 043192 191 YFWG 194 (316)
Q Consensus 191 ~~~~ 194 (316)
.++.
T Consensus 176 ~~d~ 179 (994)
T PRK07868 176 PVDT 179 (994)
T ss_pred cccc
Confidence 5543
No 115
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.25 E-value=1.2e-10 Score=103.74 Aligned_cols=191 Identities=18% Similarity=0.229 Sum_probs=98.3
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-------------C-------------CCc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-------------P-------------VPA 119 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------------~-------------~~~ 119 (316)
+++|+|||-||-| |+.. .|-.++..||.+ ||+|+++|+|-.... . +..
T Consensus 98 ~~~PvvIFSHGlg---g~R~--~yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGLG---GSRT--SYSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--TT-----TT--TTHHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCCC---cchh--hHHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 6799999999944 4444 466788888877 999999999943110 0 000
Q ss_pred ----------------chhhHHHHHHHHHHhcCCCCCc---------ccccccCCCccEEEEeechHHHHHHHHHHHhhc
Q 043192 120 ----------------AHEDSWTALKWVASHANGRGPE---------DWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 120 ----------------~~~d~~~~~~~l~~~~~~~~~~---------~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
-..|+..+++.|.+....-... ..+.-.+|.++|+++|||+||..++..+.+.
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--
Confidence 0245666777776432111000 0112257889999999999999999988774
Q ss_pred ccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCC
Q 043192 175 EKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQL 254 (316)
Q Consensus 175 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~ 254 (316)
..+++.|++.|+..... .. ...+++. |+|+++.+.
T Consensus 250 -----~r~~~~I~LD~W~~Pl~---~~------------------------------------~~~~i~~-P~L~InSe~ 284 (379)
T PF03403_consen 250 -----TRFKAGILLDPWMFPLG---DE------------------------------------IYSKIPQ-PLLFINSES 284 (379)
T ss_dssp -----TT--EEEEES---TTS----GG------------------------------------GGGG--S--EEEEEETT
T ss_pred -----cCcceEEEeCCcccCCC---cc------------------------------------cccCCCC-CEEEEECcc
Confidence 46999999998873211 00 1123344 999997764
Q ss_pred ccccc-hHHHHHHHHHhCCCCcccEEEEeCCCcccccc----cCCC--------------cHHHHHHHHHHHHHHhcC
Q 043192 255 DLLRG-RGLYYVTKLKESGWKGDAKVSEIMGETHVFHL----LNPS--------------SLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 255 D~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~----~~~~--------------~~~~~~~~~~i~~fl~~~ 313 (316)
-... ....+.+ +..... ...++.+.|..|.-+. +.|. ....+...+.+++||++|
T Consensus 285 -f~~~~~~~~~~~-~~~~~~--~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~ 358 (379)
T PF03403_consen 285 -FQWWENIFRMKK-VISNNK--ESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRH 358 (379)
T ss_dssp -T--HHHHHHHHT-T--TTS---EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHH
T ss_pred -cCChhhHHHHHH-HhccCC--CcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHh
Confidence 3222 2222222 223333 6788999999997551 2220 111345566788888775
No 116
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.25 E-value=2e-10 Score=102.89 Aligned_cols=67 Identities=24% Similarity=0.304 Sum_probs=53.1
Q ss_pred cccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCC-CcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 238 KLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMG-ETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.+.++.+ |+|+++|+.|.+++ .++++.+.+...+. +++++++++ .+|.... ++.+++.+.|.+||++
T Consensus 318 ~L~~I~~-PtLvI~G~~D~l~p~~~~~~la~~lp~~~~--~a~l~~I~s~~GH~~~l-----e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEA-NVLMIPCKQDLLQPPRYNYKMVDILQKQGK--YAEVYEIESINGHMAGV-----FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCC-CEEEEEeCCCCCCCHHHHHHHHHHhhhcCC--CeEEEEECCCCCcchhh-----cCHHHHHHHHHHHHcc
Confidence 3556777 99999999999874 66778888876655 789999985 8995543 5568899999999976
No 117
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.24 E-value=3e-10 Score=96.13 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=123.8
Q ss_pred eEEEEE-ecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC------CcchhhH
Q 043192 52 LSARIY-FPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV------PAAHEDS 124 (316)
Q Consensus 52 ~~~~~~-~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~------~~~~~d~ 124 (316)
+..+++ ...+. ...|.++++|| ..|+.. .|..+...++.+.+.-++.+|-|.++.++. ..+.+|+
T Consensus 38 l~y~~~~~~~~~---~~~Pp~i~lHG---l~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv 109 (315)
T KOG2382|consen 38 LAYDSVYSSENL---ERAPPAIILHG---LLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDV 109 (315)
T ss_pred cceeeeeccccc---CCCCceEEecc---cccCCC--CHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHH
Confidence 444444 33333 46788999999 677775 688999999999999999999997765443 3334455
Q ss_pred HHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHH-HHHHHHHHHhhcccccCCccceeEE--ecccccCCCCCCCC
Q 043192 125 WTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGG-NIAHHMGIRQGQEKLEGINIDGICL--LFPYFWGSAPIPGE 201 (316)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG-~~a~~~a~~~~~~~~~~~~~~~~i~--~~p~~~~~~~~~~~ 201 (316)
...+++.... .-..++.|.|||||| .+++..+...++ .+..+|+ ++|..-.. ...+.
T Consensus 110 ~~Fi~~v~~~-------------~~~~~~~l~GHsmGG~~~~m~~t~~~p~------~~~rliv~D~sP~~~~~-~~~e~ 169 (315)
T KOG2382|consen 110 KLFIDGVGGS-------------TRLDPVVLLGHSMGGVKVAMAETLKKPD------LIERLIVEDISPGGVGR-SYGEY 169 (315)
T ss_pred HHHHHHcccc-------------cccCCceecccCcchHHHHHHHHHhcCc------ccceeEEEecCCccCCc-ccchH
Confidence 4444444322 124689999999999 666666666544 2444443 34421000 00000
Q ss_pred ----------CCC----CC-------cc----cccchhhhhhhCCCCCCCCCCc-------------cC---CC-CCCcc
Q 043192 202 ----------PYV----PE-------YW----TTIIDEPWQIARPDTSGLDDPI-------------IN---PV-ADPKL 239 (316)
Q Consensus 202 ----------~~~----~~-------~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~-~~~~~ 239 (316)
... .. +. ......+....+.. ...+.. +. .. ...++
T Consensus 170 ~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~--~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l 247 (315)
T KOG2382|consen 170 RELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKK--SPSDGSFLWRVNLDSIASLLDEYEILSYWADL 247 (315)
T ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCc--CCCCCceEEEeCHHHHHHHHHHHHhhcccccc
Confidence 000 00 00 00010111111110 011100 00 00 00022
Q ss_pred --cCCCCCcEEEEEcCCccccch--HHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 240 --SSLGCNRLLVFVAQLDLLRGR--GLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 240 --~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
.-... |+|+++|.++..+.. -.++..... .+++..++++||.... +..+++++.|.+||+++.
T Consensus 248 ~~~~~~~-pvlfi~g~~S~fv~~~~~~~~~~~fp------~~e~~~ld~aGHwVh~-----E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 248 EDGPYTG-PVLFIKGLQSKFVPDEHYPRMEKIFP------NVEVHELDEAGHWVHL-----EKPEEFIESISEFLEEPE 314 (315)
T ss_pred ccccccc-ceeEEecCCCCCcChhHHHHHHHhcc------chheeecccCCceeec-----CCHHHHHHHHHHHhcccC
Confidence 11223 999999999998852 233333322 6899999999996664 445899999999998864
No 118
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.22 E-value=1e-10 Score=100.10 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcc-------hhhHHHHHHHHHHhcCCC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA-------HEDSWTALKWVASHANGR 138 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~~~ 138 (316)
..+|++|+|||.+ ++........+...++.+.++.|+++|++......++.. .+++...+++|.+..
T Consensus 34 ~~~p~vilIHG~~---~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~--- 107 (275)
T cd00707 34 PSRPTRFIIHGWT---SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT--- 107 (275)
T ss_pred CCCCcEEEEcCCC---CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 4568999999944 333211223344456666689999999997643333322 245566666666542
Q ss_pred CCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 139 GPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 139 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
.++.++++|+||||||++|..++.+.+. +++.++++.|...
T Consensus 108 --------g~~~~~i~lIGhSlGa~vAg~~a~~~~~------~v~~iv~LDPa~p 148 (275)
T cd00707 108 --------GLSLENVHLIGHSLGAHVAGFAGKRLNG------KLGRITGLDPAGP 148 (275)
T ss_pred --------CCChHHEEEEEecHHHHHHHHHHHHhcC------ccceeEEecCCcc
Confidence 2667899999999999999999988743 6999999988653
No 119
>COG0627 Predicted esterase [General function prediction only]
Probab=99.21 E-value=1e-10 Score=100.83 Aligned_cols=232 Identities=13% Similarity=0.142 Sum_probs=129.3
Q ss_pred EEEEecCCCC---CCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC-------------CCCCCCC
Q 043192 54 ARIYFPNNTN---RNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR-------------RAPEDPV 117 (316)
Q Consensus 54 ~~~~~P~~~~---~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r-------------~~~~~~~ 117 (316)
..+++|+.+. .+++.||++++||-. ++........-+++.+.+.|++++.+|-. .+...+|
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~t---~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGLT---CNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCCC---CCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 5566665541 246789999999933 33221112233567778889999988533 1111222
Q ss_pred Ccchhh------HHHHHHHHHHhcCCCCCcccccc-cCCC--ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe
Q 043192 118 PAAHED------SWTALKWVASHANGRGPEDWLKT-YADF--QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL 188 (316)
Q Consensus 118 ~~~~~d------~~~~~~~l~~~~~~~~~~~~~~~-~~d~--~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 188 (316)
..-... ......||.++.+.. |... ..+. ++.+|.||||||+-|+.+|+++++ +++.+..+
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~----~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd------~f~~~sS~ 183 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPAL----WEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD------RFKSASSF 183 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHH----HHHhcCcccccCCceeEEEeccchhhhhhhhhCcc------hhceeccc
Confidence 111111 123333444433200 0000 1333 389999999999999999999854 59999999
Q ss_pred cccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCC----CCCCccCCCCC---C------cccCCCCCcEEEEEcCCc
Q 043192 189 FPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSG----LDDPIINPVAD---P------KLSSLGCNRLLVFVAQLD 255 (316)
Q Consensus 189 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~------~~~~~~~~P~li~~G~~D 255 (316)
||+++............ ...-...+..+.+.... ..|+.. .... . .....+. ++++-+|..|
T Consensus 184 Sg~~~~s~~~~~~~~~~---~~~g~~~~~~~~G~~~~~~w~~~D~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~d~g~ad 258 (316)
T COG0627 184 SGILSPSSPWGPTLAMG---DPWGGKAFNAMLGPDSDPAWQENDPLS-LIEKLVANANTRIWVYGGSPP-ELLIDNGPAD 258 (316)
T ss_pred ccccccccccccccccc---ccccCccHHHhcCCCccccccccCchh-HHHHhhhcccccceecccCCC-ccccccccch
Confidence 99987663322220000 00011111112222101 111110 0000 0 0010222 7888899999
Q ss_pred cccc----hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 256 LLRG----RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 256 ~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.+.. ..+.|.+++.+.|+ +..+...++..|.|.++ ...++.++.|+..
T Consensus 259 ~~~~~~~~~~~~~~~a~~~~g~--~~~~~~~~~G~Hsw~~w-------~~~l~~~~~~~a~ 310 (316)
T COG0627 259 FFLAANNLSTRAFAEALRAAGI--PNGVRDQPGGDHSWYFW-------ASQLADHLPWLAG 310 (316)
T ss_pred hhhhhcccCHHHHHHHHHhcCC--CceeeeCCCCCcCHHHH-------HHHHHHHHHHHHH
Confidence 8664 47899999999999 78888888999998865 4556666666654
No 120
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.20 E-value=1.5e-11 Score=108.00 Aligned_cols=129 Identities=25% Similarity=0.335 Sum_probs=99.2
Q ss_pred CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC----------CCCCCC
Q 043192 49 EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA----------PEDPVP 118 (316)
Q Consensus 49 ~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----------~~~~~~ 118 (316)
++-+.+.+|.|. .+ ..+.-|+|||.||||..|+++-..|+. ..|++....+|++++||.+ ++.+..
T Consensus 118 EDCLYlNVW~P~-~~-p~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGN 193 (601)
T KOG4389|consen 118 EDCLYLNVWAPA-AD-PYNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGN 193 (601)
T ss_pred hhceEEEEeccC-CC-CCCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCCCCCc
Confidence 457889999994 11 234459999999999999987444433 4566666799999999965 344556
Q ss_pred cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 119 AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 119 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
-.+-|..-|+.|++++...+| .|+++|.|+|.|+|+.-....+...... ..++.+|+-|+.++
T Consensus 194 mGl~DQqLAl~WV~~Ni~aFG--------Gnp~~vTLFGESAGaASv~aHLlsP~S~----glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 194 MGLLDQQLALQWVQENIAAFG--------GNPSRVTLFGESAGAASVVAHLLSPGSR----GLFHRAILQSGSLN 256 (601)
T ss_pred cchHHHHHHHHHHHHhHHHhC--------CCcceEEEeccccchhhhhheecCCCch----hhHHHHHhhcCCCC
Confidence 678899999999999999997 9999999999999998776666554443 35777887776554
No 121
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.18 E-value=3.6e-10 Score=94.48 Aligned_cols=208 Identities=18% Similarity=0.212 Sum_probs=127.0
Q ss_pred eeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhc---CcEEEeecCCCCCC
Q 043192 40 DSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHA---KIIAVSVDYRRAPE 114 (316)
Q Consensus 40 ~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~---g~~v~~~d~r~~~~ 114 (316)
..+++.|.+ ..+....+|+|++.++..++|+++++||=-|..-.. ....+..+..+. ..+++.+||--...
T Consensus 68 ~~~~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~vgid~~d~~~ 143 (299)
T COG2382 68 PVEEILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAILVGIDYIDVKK 143 (299)
T ss_pred chhhhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceEEecCCCCHHH
Confidence 334555554 346788899999998788999999999955543221 234555666652 36677777542100
Q ss_pred --CCCC---cchhhH-HHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe
Q 043192 115 --DPVP---AAHEDS-WTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL 188 (316)
Q Consensus 115 --~~~~---~~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 188 (316)
..+. ...+.+ ...+=++.+..+. .-+.++-+|+|.|+||.+++..++++++ .|..++..
T Consensus 144 R~~~~~~n~~~~~~L~~eLlP~v~~~yp~---------~~~a~~r~L~G~SlGG~vsL~agl~~Pe------~FG~V~s~ 208 (299)
T COG2382 144 RREELHCNEAYWRFLAQELLPYVEERYPT---------SADADGRVLAGDSLGGLVSLYAGLRHPE------RFGHVLSQ 208 (299)
T ss_pred HHHHhcccHHHHHHHHHHhhhhhhccCcc---------cccCCCcEEeccccccHHHHHHHhcCch------hhceeecc
Confidence 0111 112221 2233455554332 2566789999999999999999999855 69999999
Q ss_pred cccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHH
Q 043192 189 FPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKL 268 (316)
Q Consensus 189 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l 268 (316)
||.++-.......... .. ..+......+....=++...++.+.+....+++++.|
T Consensus 209 Sps~~~~~~~~~~~~~-------~~------------------~~l~~~~a~~~~~~~~l~~g~~~~~~~~pNr~L~~~L 263 (299)
T COG2382 209 SGSFWWTPLDTQPQGE-------VA------------------ESLKILHAIGTDERIVLTTGGEEGDFLRPNRALAAQL 263 (299)
T ss_pred CCccccCccccccccc-------hh------------------hhhhhhhccCccceEEeecCCccccccchhHHHHHHH
Confidence 9988644221110000 00 0000000111111013333444445778899999999
Q ss_pred HhCCCCcccEEEEeCCCcccccccCC
Q 043192 269 KESGWKGDAKVSEIMGETHVFHLLNP 294 (316)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~H~~~~~~~ 294 (316)
++.|+ +..+..|+| +|.+..+.+
T Consensus 264 ~~~g~--~~~yre~~G-gHdw~~Wr~ 286 (299)
T COG2382 264 EKKGI--PYYYREYPG-GHDWAWWRP 286 (299)
T ss_pred HhcCC--cceeeecCC-CCchhHhHH
Confidence 99999 999999999 999887654
No 122
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.08 E-value=1.9e-09 Score=96.78 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=72.5
Q ss_pred CCccEEEEEcCCcccccCcchhhhHH-HHHHHHHh-cCcEEEeecCCCCCCCCCCcc-------hhhHHHHHHHHHHhcC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHA-YMNTLVSH-AKIIAVSVDYRRAPEDPVPAA-------HEDSWTALKWVASHAN 136 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~l~~~-~g~~v~~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~ 136 (316)
...|++|+|||.+. +.....|.. ++..+..+ ..+.|+++|+++.+...++.. .+++...+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~---s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~- 114 (442)
T TIGR03230 39 HETKTFIVIHGWTV---TGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF- 114 (442)
T ss_pred CCCCeEEEECCCCc---CCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh-
Confidence 35689999999442 211112332 33444433 269999999998766555432 234556666665543
Q ss_pred CCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 137 GRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 137 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.++.+++.|+||||||++|..++.+.+ .++.+++++.|.-
T Consensus 115 ----------gl~l~~VhLIGHSLGAhIAg~ag~~~p------~rV~rItgLDPAg 154 (442)
T TIGR03230 115 ----------NYPWDNVHLLGYSLGAHVAGIAGSLTK------HKVNRITGLDPAG 154 (442)
T ss_pred ----------CCCCCcEEEEEECHHHHHHHHHHHhCC------cceeEEEEEcCCC
Confidence 256789999999999999999988763 3689999998854
No 123
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.08 E-value=2.2e-09 Score=89.50 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=121.5
Q ss_pred CCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCC---------C---C----------------
Q 043192 65 NQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPE---------D---P---------------- 116 (316)
Q Consensus 65 ~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~---------~---~---------------- 116 (316)
+.++|+|||-||=| |+.+ .|..++..+|.. ||.|.++++|-.+. + +
T Consensus 115 ~~k~PvvvFSHGLg---gsRt--~YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLG---GSRT--LYSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCccEEEEecccc---cchh--hHHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 46899999999933 4444 566788888776 99999999984321 0 0
Q ss_pred -C-------CcchhhHHHHHHHHHHhcCCC-------C-Ccc--cccccCCCccEEEEeechHHHHHHHHHHHhhccccc
Q 043192 117 -V-------PAAHEDSWTALKWVASHANGR-------G-PED--WLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLE 178 (316)
Q Consensus 117 -~-------~~~~~d~~~~~~~l~~~~~~~-------~-~~~--~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 178 (316)
+ -...+.+..+++-|.+-...- | +.+ .+.-.+|..+++++|||.||..++......
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~------ 262 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH------ 262 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc------
Confidence 0 001345566666555432100 1 111 111137888999999999999998887653
Q ss_pred CCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcccc
Q 043192 179 GINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLR 258 (316)
Q Consensus 179 ~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~ 258 (316)
..+++.|+...|.-.-+. ....+.+. |+|++. .+|--.
T Consensus 263 -t~FrcaI~lD~WM~Pl~~---------------------------------------~~~~~arq-P~~fin-v~~fQ~ 300 (399)
T KOG3847|consen 263 -TDFRCAIALDAWMFPLDQ---------------------------------------LQYSQARQ-PTLFIN-VEDFQW 300 (399)
T ss_pred -cceeeeeeeeeeecccch---------------------------------------hhhhhccC-CeEEEE-cccccc
Confidence 249999988776632211 02223333 999988 335545
Q ss_pred chHHHHHHHHHhCCCCcccEEEEeCCCcccccc-c-----------------CCCcHHHHHHHHHHHHHHhcC
Q 043192 259 GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHL-L-----------------NPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 259 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~-~-----------------~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.++....+++..... .-.++.+.|+-|--+. + ....+..+...+..+.||++|
T Consensus 301 ~en~~vmKki~~~n~--g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h 371 (399)
T KOG3847|consen 301 NENLLVMKKIESQNE--GNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKH 371 (399)
T ss_pred hhHHHHHHhhhCCCc--cceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhh
Confidence 566666667666554 5688999999996441 0 112244567778888999886
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.07 E-value=1.6e-09 Score=85.22 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=110.7
Q ss_pred EEEEEcC-CcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC--CCCCCCcchhhHHHHHHHHHHhcCCCCCcccccc
Q 043192 70 LVVYFHG-GAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA--PEDPVPAAHEDSWTALKWVASHANGRGPEDWLKT 146 (316)
Q Consensus 70 ~vv~iHG-gg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 146 (316)
++|++-| |||..- -...+..| ++.|+.|+.+|-... ...+-.+...|+..+++...+.
T Consensus 4 ~~v~~SGDgGw~~~------d~~~a~~l-~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~------------ 64 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL------DKQIAEAL-AKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRAR------------ 64 (192)
T ss_pred EEEEEeCCCCchhh------hHHHHHHH-HHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHH------------
Confidence 5677777 665311 12444444 556999999994421 1222244567888888877776
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGL 226 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (316)
-..+++.|+|.|+|+-+......+.+... ..+++.+++++|.....- ..-...+.+.. .
T Consensus 65 -w~~~~vvLiGYSFGADvlP~~~nrLp~~~--r~~v~~v~Ll~p~~~~dF----------------eihv~~wlg~~--~ 123 (192)
T PF06057_consen 65 -WGRKRVVLIGYSFGADVLPFIYNRLPAAL--RARVAQVVLLSPSTTADF----------------EIHVSGWLGMG--G 123 (192)
T ss_pred -hCCceEEEEeecCCchhHHHHHhhCCHHH--HhheeEEEEeccCCcceE----------------EEEhhhhcCCC--C
Confidence 34589999999999999888888776543 467999999988652211 00001111110 0
Q ss_pred CCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHH
Q 043192 227 DDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTT 306 (316)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i 306 (316)
.+..+.+.. .+.+++..|++-++|++|.-. .+ ..+++. .++.+..||. |.|. .......+.|
T Consensus 124 ~~~~~~~~p--ei~~l~~~~v~CiyG~~E~d~-~c----p~l~~~----~~~~i~lpGg-HHfd------~dy~~La~~I 185 (192)
T PF06057_consen 124 DDAAYPVIP--EIAKLPPAPVQCIYGEDEDDS-LC----PSLRQP----GVEVIALPGG-HHFD------GDYDALAKRI 185 (192)
T ss_pred CcccCCchH--HHHhCCCCeEEEEEcCCCCCC-cC----ccccCC----CcEEEEcCCC-cCCC------CCHHHHHHHH
Confidence 000011111 566666558999999988631 11 123332 6799999995 5455 2235666777
Q ss_pred HHHHhc
Q 043192 307 VDFIHG 312 (316)
Q Consensus 307 ~~fl~~ 312 (316)
++-|+.
T Consensus 186 l~~l~~ 191 (192)
T PF06057_consen 186 LDALKA 191 (192)
T ss_pred HHHHhc
Confidence 776654
No 125
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.06 E-value=5.1e-09 Score=82.83 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=88.3
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCC
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADF 150 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 150 (316)
|+++||-+ ++... -|..++.+-+... +.|-.++. . .-+...-+..|.+.... . .
T Consensus 1 v~IvhG~~---~s~~~-HW~~wl~~~l~~~-~~V~~~~~------~----~P~~~~W~~~l~~~i~~----------~-~ 54 (171)
T PF06821_consen 1 VLIVHGYG---GSPPD-HWQPWLERQLENS-VRVEQPDW------D----NPDLDEWVQALDQAIDA----------I-D 54 (171)
T ss_dssp EEEE--TT---SSTTT-STHHHHHHHHTTS-EEEEEC--------T----S--HHHHHHHHHHCCHC------------T
T ss_pred CEEeCCCC---CCCcc-HHHHHHHHhCCCC-eEEecccc------C----CCCHHHHHHHHHHHHhh----------c-C
Confidence 68999943 44332 3667776666654 66666554 1 12445555666665432 2 3
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPI 230 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (316)
+.++|+|||.|+..++.++.... ..+++|+++++|+..... ... .+.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~-----~~~v~g~lLVAp~~~~~~-~~~---------------------------~~~ 101 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQS-----QKKVAGALLVAPFDPDDP-EPF---------------------------PPE 101 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTC-----CSSEEEEEEES--SCGCH-HCC---------------------------TCG
T ss_pred CCeEEEEeCHHHHHHHHHHhhcc-----cccccEEEEEcCCCcccc-cch---------------------------hhh
Confidence 56999999999999999995221 357999999999863200 000 000
Q ss_pred cCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccc
Q 043192 231 INPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVF 289 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~ 289 (316)
...+.......++. |.+++.+++|+.++ .+.++++++ +++++.++++||.-
T Consensus 102 ~~~f~~~p~~~l~~-~~~viaS~nDp~vp~~~a~~~A~~l-------~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 102 LDGFTPLPRDPLPF-PSIVIASDNDPYVPFERAQRLAQRL-------GAELIILGGGGHFN 154 (171)
T ss_dssp GCCCTTSHCCHHHC-CEEEEEETTBSSS-HHHHHHHHHHH-------T-EEEEETS-TTSS
T ss_pred ccccccCcccccCC-CeEEEEcCCCCccCHHHHHHHHHHc-------CCCeEECCCCCCcc
Confidence 11111112233444 78999999999885 667777777 46999999999943
No 126
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=2.6e-09 Score=96.97 Aligned_cols=241 Identities=16% Similarity=0.117 Sum_probs=148.7
Q ss_pred eeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCC
Q 043192 40 DSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV 117 (316)
Q Consensus 40 ~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~ 117 (316)
+...+.|++ |..+++.|++-+....++..|.+|+.|||....-.+. |..-...|.. .|+.....+-|++++...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~---f~~srl~lld-~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPS---FRASRLSLLD-RGWVLAYANVRGGGEYGE 515 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccc---cccceeEEEe-cceEEEEEeeccCccccc
Confidence 444556665 4568888888666555678999999999765444433 3222223444 699888899998875421
Q ss_pred -----------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeE
Q 043192 118 -----------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGIC 186 (316)
Q Consensus 118 -----------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i 186 (316)
-..++|..++.++|.++. ...+++.++.|.|+||.++.++.-.+| ..+.++|
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~g-----------yt~~~kL~i~G~SaGGlLvga~iN~rP------dLF~avi 578 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENG-----------YTQPSKLAIEGGSAGGLLVGACINQRP------DLFGAVI 578 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcC-----------CCCccceeEecccCccchhHHHhccCc------hHhhhhh
Confidence 234789999999999986 688999999999999999998887764 4799999
Q ss_pred EecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCC---CCccc-CCCCCcEEEEEcCCcccc--ch
Q 043192 187 LLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVA---DPKLS-SLGCNRLLVFVAQLDLLR--GR 260 (316)
Q Consensus 187 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~P~li~~G~~D~~~--~~ 260 (316)
+-.|+.|......-. ..+. .-.-|..+-.......-..++++. ...-. ..| -+||..+.+|.-+ -+
T Consensus 579 a~VpfmDvL~t~~~t-ilpl-----t~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YP--S~lvtta~hD~RV~~~~ 650 (712)
T KOG2237|consen 579 AKVPFMDVLNTHKDT-ILPL-----TTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYP--SMLVTTADHDDRVGPLE 650 (712)
T ss_pred hcCcceehhhhhccC-cccc-----chhhhcccCChhhhhhhheecccCccCCCchhccCc--ceEEeeccCCCcccccc
Confidence 999998765321110 0000 000011111110011111223322 21111 245 6999999998644 36
Q ss_pred HHHHHHHHHhCCCC-----cccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 261 GLYYVTKLKESGWK-----GDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 261 ~~~~~~~l~~~g~~-----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
+.++.++|+.+-.. .++-+.+..++||+.. .+..+..+ -.....+||.+
T Consensus 651 ~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~--~~~~k~~~-E~a~~yaFl~K 704 (712)
T KOG2237|consen 651 SLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAE--KPRFKQIE-EAAFRYAFLAK 704 (712)
T ss_pred hHHHHHHHHHHhhcchhcCCCEEEEEecCCccccC--CchHHHHH-HHHHHHHHHHH
Confidence 77777777654210 0456778899999666 34333333 33355566644
No 127
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.06 E-value=4.1e-09 Score=90.85 Aligned_cols=188 Identities=18% Similarity=0.094 Sum_probs=107.8
Q ss_pred HHHHHHHHHhcCcEEEeecCCCCCCCCCCcc---hhhHHHHHHHHHHhcCCCCCcccccccC-CCccEEEEeechHHHHH
Q 043192 90 HAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA---HEDSWTALKWVASHANGRGPEDWLKTYA-DFQKVILSGDSAGGNIA 165 (316)
Q Consensus 90 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~---~~d~~~~~~~l~~~~~~~~~~~~~~~~~-d~~~i~l~G~S~GG~~a 165 (316)
..++..++++ ||+|+++||.+-+. +|-.. -..+.++++..++.....| + ...+++++|+|.||+.+
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~~g--------l~~~~~v~l~GySqGG~Aa 85 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPKLG--------LSPSSRVALWGYSQGGQAA 85 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccccC--------CCCCCCEEEEeeCccHHHH
Confidence 3566777766 99999999987554 55333 3555666666665543222 3 23689999999999999
Q ss_pred HHHHHHhhcccccCCc--cceeEEecccccCCCCCCCCCC-----------------CCCcc-------ccc----chhh
Q 043192 166 HHMGIRQGQEKLEGIN--IDGICLLFPYFWGSAPIPGEPY-----------------VPEYW-------TTI----IDEP 215 (316)
Q Consensus 166 ~~~a~~~~~~~~~~~~--~~~~i~~~p~~~~~~~~~~~~~-----------------~~~~~-------~~~----~~~~ 215 (316)
++.+...+. ..+... +.|+++.+|..+.......... .+.+. ... +...
T Consensus 86 ~~AA~l~~~-YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~ 164 (290)
T PF03583_consen 86 LWAAELAPS-YAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDA 164 (290)
T ss_pred HHHHHHhHH-hCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHH
Confidence 887644322 222345 8888887776654332211100 00000 000 0000
Q ss_pred --------hhhhCCCCC--C---CCCCccCCCCC---------Ccc----cCCCCCcEEEEEcCCccccc--hHHHHHHH
Q 043192 216 --------WQIARPDTS--G---LDDPIINPVAD---------PKL----SSLGCNRLLVFVAQLDLLRG--RGLYYVTK 267 (316)
Q Consensus 216 --------~~~~~~~~~--~---~~~~~~~~~~~---------~~~----~~~~~~P~li~~G~~D~~~~--~~~~~~~~ 267 (316)
...+..... . ...+....+.. ..+ ...|..|++|.||..|.+++ ....++++
T Consensus 165 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~ 244 (290)
T PF03583_consen 165 RTRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAK 244 (290)
T ss_pred HhhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHH
Confidence 000000000 0 00000000000 022 22344499999999999885 67899999
Q ss_pred HHhCC-CCcccEEEEeCCCccccc
Q 043192 268 LKESG-WKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 268 l~~~g-~~~~~~~~~~~~~~H~~~ 290 (316)
+.+.| . +++++.+++.+|.-.
T Consensus 245 ~c~~G~a--~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 245 WCAAGGA--DVEYVRYPGGGHLGA 266 (290)
T ss_pred HHHcCCC--CEEEEecCCCChhhh
Confidence 99999 7 899999999999654
No 128
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.98 E-value=1e-08 Score=88.43 Aligned_cols=118 Identities=19% Similarity=0.137 Sum_probs=84.6
Q ss_pred eeeEEecC---CCceEEEEEecCCCCC---CCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCC
Q 043192 41 SKDIIYSS---EHNLSARIYFPNNTNR---NQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPE 114 (316)
Q Consensus 41 ~~~v~~~~---~~~~~~~~~~P~~~~~---~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~ 114 (316)
...+.+.. +..+.+++|+|..... -...|+|++-||-|-. .. -..|+....++.||+|..+++.++..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~---~~---~f~~~A~~lAs~Gf~Va~~~hpgs~~ 111 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY---VT---GFAWLAEHLASYGFVVAAPDHPGSNA 111 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC---cc---chhhhHHHHhhCceEEEeccCCCccc
Confidence 56666655 3478999999987631 1479999999995532 22 23455566677799999999987532
Q ss_pred C---------------CCCcchhhHHHHHHHHHHh---cCCCCCcccccccCCCccEEEEeechHHHHHHHHHHH
Q 043192 115 D---------------PVPAAHEDSWTALKWVASH---ANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 115 ~---------------~~~~~~~d~~~~~~~l~~~---~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 171 (316)
. .|.....|+...+++|.+. ..--| ++|..+|.+.|||.||..++.++-.
T Consensus 112 ~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~-------~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 112 GGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAG-------RLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCccccc-------ccCccceEEEecccccHHHHHhccc
Confidence 1 1123457888899988877 21112 6999999999999999999998864
No 129
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.97 E-value=5.1e-09 Score=86.24 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=65.4
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccc--cCCccceeEEecccccCCCCC
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKL--EGINIDGICLLFPYFWGSAPI 198 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~~~~~ 198 (316)
..++..+++++.+...+.| .=.+|+|+|.||.+|..++........ ....++.+|++|++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G-----------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~ 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG-----------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY 151 (212)
T ss_dssp G---HHHHHHHHHHHHHH--------------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G
T ss_pred ccCHHHHHHHHHHHHHhcC-----------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh
Confidence 4567777777777653322 348899999999999999876543211 235689999999876321110
Q ss_pred CCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcc
Q 043192 199 PGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGD 276 (316)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~ 276 (316)
.... .-.++.+ |+|-++|.+|.+++ .++.+++.... .
T Consensus 152 ---------------------------------~~~~--~~~~i~i-PtlHv~G~~D~~~~~~~s~~L~~~~~~-----~ 190 (212)
T PF03959_consen 152 ---------------------------------QELY--DEPKISI-PTLHVIGENDPVVPPERSEALAEMFDP-----D 190 (212)
T ss_dssp ---------------------------------TTTT----TT----EEEEEEETT-SSS-HHHHHHHHHHHHH-----H
T ss_pred ---------------------------------hhhh--ccccCCC-CeEEEEeCCCCCcchHHHHHHHHhccC-----C
Confidence 0000 1222344 99999999999997 77888888774 2
Q ss_pred cEEEEeCCCccccc
Q 043192 277 AKVSEIMGETHVFH 290 (316)
Q Consensus 277 ~~~~~~~~~~H~~~ 290 (316)
.+++..++ +|.+-
T Consensus 191 ~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 191 ARVIEHDG-GHHVP 203 (212)
T ss_dssp EEEEEESS-SSS--
T ss_pred cEEEEECC-CCcCc
Confidence 57777777 78444
No 130
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.88 E-value=1.4e-07 Score=86.64 Aligned_cols=133 Identities=12% Similarity=0.171 Sum_probs=82.2
Q ss_pred eeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCc---ccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC--
Q 043192 41 SKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGA---FIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-- 115 (316)
Q Consensus 41 ~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg---~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-- 115 (316)
..+|.+.++ .+.+.-|.|...+ ...+-||+++.-- |...-. -..++++.+.++ |+.|+.+|++.-+..
T Consensus 191 Pg~VV~~n~-l~eLiqY~P~te~--v~~~PLLIVPp~INK~YIlDL~---P~~SlVr~lv~q-G~~VflIsW~nP~~~~r 263 (560)
T TIGR01839 191 EGAVVFRNE-VLELIQYKPITEQ--QHARPLLVVPPQINKFYIFDLS---PEKSFVQYCLKN-QLQVFIISWRNPDKAHR 263 (560)
T ss_pred CCceeEECC-ceEEEEeCCCCCC--cCCCcEEEechhhhhhheeecC---CcchHHHHHHHc-CCeEEEEeCCCCChhhc
Confidence 345556533 5677777776432 2334467777611 111111 124667666665 999999999964322
Q ss_pred --CCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccC-CccceeEEecccc
Q 043192 116 --PVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEG-INIDGICLLFPYF 192 (316)
Q Consensus 116 --~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~-~~~~~~i~~~p~~ 192 (316)
++.+.++.+..+++.+++. ...++|.++|+||||.+++.++..+...+ + .+|+.++++...+
T Consensus 264 ~~~ldDYv~~i~~Ald~V~~~-------------tG~~~vnl~GyC~GGtl~a~~~a~~aA~~--~~~~V~sltllatpl 328 (560)
T TIGR01839 264 EWGLSTYVDALKEAVDAVRAI-------------TGSRDLNLLGACAGGLTCAALVGHLQALG--QLRKVNSLTYLVSLL 328 (560)
T ss_pred CCCHHHHHHHHHHHHHHHHHh-------------cCCCCeeEEEECcchHHHHHHHHHHHhcC--CCCceeeEEeeeccc
Confidence 3344455677777777765 45689999999999999997322222111 2 2589999887777
Q ss_pred cCC
Q 043192 193 WGS 195 (316)
Q Consensus 193 ~~~ 195 (316)
|..
T Consensus 329 Df~ 331 (560)
T TIGR01839 329 DST 331 (560)
T ss_pred ccC
Confidence 654
No 131
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.85 E-value=7.3e-07 Score=74.62 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=61.3
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhc-CcEEEeecCCCCCCCC--CCcchhhHHHHHHHHHHhcCCCCCcccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHA-KIIAVSVDYRRAPEDP--VPAAHEDSWTALKWVASHANGRGPEDWL 144 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 144 (316)
.|.++++||++... . .+......+.... .|.++.+|.|+.+.+. .. ........+..+.+.
T Consensus 21 ~~~i~~~hg~~~~~---~--~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~---------- 84 (282)
T COG0596 21 GPPLVLLHGFPGSS---S--VWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY-SLSAYADDLAALLDA---------- 84 (282)
T ss_pred CCeEEEeCCCCCch---h--hhHHHHHHhhccccceEEEEecccCCCCCCcccc-cHHHHHHHHHHHHHH----------
Confidence 35899999966322 2 2222112222221 1899999999766554 11 111112223333332
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
....++.++|||+||.+++.++.+.++ .+++++++++..
T Consensus 85 ---~~~~~~~l~G~S~Gg~~~~~~~~~~p~------~~~~~v~~~~~~ 123 (282)
T COG0596 85 ---LGLEKVVLVGHSMGGAVALALALRHPD------RVRGLVLIGPAP 123 (282)
T ss_pred ---hCCCceEEEEecccHHHHHHHHHhcch------hhheeeEecCCC
Confidence 223449999999999999999998854 589999888654
No 132
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.78 E-value=5.2e-08 Score=93.07 Aligned_cols=93 Identities=20% Similarity=0.195 Sum_probs=60.4
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCC----------------------------
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVP---------------------------- 118 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---------------------------- 118 (316)
.+|+||++||-+ +... .|..++..++. .||.|+++|+++++...+.
T Consensus 448 g~P~VVllHG~~---g~~~--~~~~lA~~La~-~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGIT---GAKE--NALAFAGTLAA-AGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCC---CCHH--HHHHHHHHHHh-CCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 468999999933 3333 46666666654 4999999999987655332
Q ss_pred --cchhhHHHHHHHHH------HhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 119 --AAHEDSWTALKWVA------SHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 119 --~~~~d~~~~~~~l~------~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
+.+.|+......+. +....++ ..+..+++++||||||.+++.++...
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~-------~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGIN-------VIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccc-------CCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 11234444434333 1111111 25668999999999999999999763
No 133
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.74 E-value=9e-07 Score=78.92 Aligned_cols=136 Identities=7% Similarity=-0.033 Sum_probs=79.3
Q ss_pred eeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcch
Q 043192 42 KDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAH 121 (316)
Q Consensus 42 ~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~ 121 (316)
+++.+. ..-..+..|.|.........|-||++-. ..+.... ..++.++.++. |+.|...|+.-....+....-
T Consensus 77 e~vV~~-~~~~~L~~y~~~~~~~~~~~~pvLiV~P---l~g~~~~-L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~ 149 (406)
T TIGR01849 77 ERVVWD-KPFCRLIHFKRQGFRAELPGPAVLIVAP---MSGHYAT-LLRSTVEALLP--DHDVYITDWVNARMVPLSAGK 149 (406)
T ss_pred EEEEEE-CCCeEEEEECCCCcccccCCCcEEEEcC---CchHHHH-HHHHHHHHHhC--CCcEEEEeCCCCCCCchhcCC
Confidence 344444 3345666776653321122356777765 2222211 23566677766 899999999876533322222
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
-++.+.++++.+-... +.++ +.|+|.|+||.+++.+++..+.+.- +.+++.++++.+.+|...
T Consensus 150 f~ldDYi~~l~~~i~~----------~G~~-v~l~GvCqgG~~~laa~Al~a~~~~-p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 150 FDLEDYIDYLIEFIRF----------LGPD-IHVIAVCQPAVPVLAAVALMAENEP-PAQPRSMTLMGGPIDARA 212 (406)
T ss_pred CCHHHHHHHHHHHHHH----------hCCC-CcEEEEchhhHHHHHHHHHHHhcCC-CCCcceEEEEecCccCCC
Confidence 2223333344443322 2234 9999999999999988887655431 346999998888777654
No 134
>PRK04940 hypothetical protein; Provisional
Probab=98.74 E-value=3.8e-07 Score=71.69 Aligned_cols=118 Identities=16% Similarity=0.165 Sum_probs=72.3
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPI 230 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (316)
+++.|+|.|+||..|.+++.++ .++ .|++.|.+.......... +...+ ...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--------g~~-aVLiNPAv~P~~~L~~~i------------------g~~~~--y~~ 110 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--------GIR-QVIFNPNLFPEENMEGKI------------------DRPEE--YAD 110 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--------CCC-EEEECCCCChHHHHHHHh------------------CCCcc--hhh
Confidence 4699999999999999999987 344 566788775543211110 00000 000
Q ss_pred cCCCCCCccc-CCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCccc-EEEEeCCCcccccccCCCcHHHHHHHHHHHH
Q 043192 231 INPVADPKLS-SLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDA-KVSEIMGETHVFHLLNPSSLHAIRMLKTTVD 308 (316)
Q Consensus 231 ~~~~~~~~~~-~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~ 308 (316)
+.+-.-..++ +-|. -.+++..+.|.+.+.-+ ..+++. .+ +.++.+|++|.|..+ ++.+..|++
T Consensus 111 ~~~~h~~eL~~~~p~-r~~vllq~gDEvLDyr~-a~~~y~------~~y~~~v~~GGdH~f~~f-------e~~l~~I~~ 175 (180)
T PRK04940 111 IATKCVTNFREKNRD-RCLVILSRNDEVLDSQR-TAEELH------PYYEIVWDEEQTHKFKNI-------SPHLQRIKA 175 (180)
T ss_pred hhHHHHHHhhhcCcc-cEEEEEeCCCcccCHHH-HHHHhc------cCceEEEECCCCCCCCCH-------HHHHHHHHH
Confidence 0000000111 1111 47999999999887433 334443 34 788999999988854 678889999
Q ss_pred HHhc
Q 043192 309 FIHG 312 (316)
Q Consensus 309 fl~~ 312 (316)
|++.
T Consensus 176 F~~~ 179 (180)
T PRK04940 176 FKTL 179 (180)
T ss_pred HHhc
Confidence 9864
No 135
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.73 E-value=5.9e-07 Score=82.25 Aligned_cols=136 Identities=16% Similarity=0.106 Sum_probs=95.1
Q ss_pred CceeeeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHH--HHHhcCcEEEeecCCCCC
Q 043192 38 HVDSKDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNT--LVSHAKIIAVSVDYRRAP 113 (316)
Q Consensus 38 ~~~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~--l~~~~g~~v~~~d~r~~~ 113 (316)
+...+++.++- |-++..+||+|++. ++.||++..+=..+...+............ .+..+||+|+..|.|+..
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~~---g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAGA---GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCCC---CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 35566666665 44788899999977 789999999933333221110011122221 344559999999999875
Q ss_pred CCC------CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEE
Q 043192 114 EDP------VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICL 187 (316)
Q Consensus 114 ~~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 187 (316)
.+. ..+..+|..+.|+||.++.=. -.+|+.+|.|++|+..+.+|+.. ++.+++++.
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWs------------NG~Vgm~G~SY~g~tq~~~Aa~~------pPaLkai~p 154 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPWS------------NGNVGMLGLSYLGFTQLAAAALQ------PPALKAIAP 154 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCcc------------CCeeeeecccHHHHHHHHHHhcC------Cchheeecc
Confidence 432 234788999999999997532 26999999999999999999875 456888887
Q ss_pred ecccccC
Q 043192 188 LFPYFWG 194 (316)
Q Consensus 188 ~~p~~~~ 194 (316)
.++..+.
T Consensus 155 ~~~~~D~ 161 (563)
T COG2936 155 TEGLVDR 161 (563)
T ss_pred ccccccc
Confidence 7776654
No 136
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.70 E-value=2.2e-06 Score=71.07 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=73.8
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGL 226 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (316)
.+|.++.+|+|||+||.+++...+.+++ .+...+++||.+..........
T Consensus 133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~------~F~~y~~~SPSlWw~n~~~l~~------------------------ 182 (264)
T COG2819 133 RTNSERTAIIGHSLGGLFVLFALLTYPD------CFGRYGLISPSLWWHNEAILRE------------------------ 182 (264)
T ss_pred ccCcccceeeeecchhHHHHHHHhcCcc------hhceeeeecchhhhCCHHHhcc------------------------
Confidence 4888999999999999999999998754 5999999999774332111000
Q ss_pred CCCccCCCCCCcccCCCCCcEEEEEcCC--cc---cc-----chHHHHHHHHHh-CCCCcccEEEEeCCCcccccccCCC
Q 043192 227 DDPIINPVADPKLSSLGCNRLLVFVAQL--DL---LR-----GRGLYYVTKLKE-SGWKGDAKVSEIMGETHVFHLLNPS 295 (316)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~P~li~~G~~--D~---~~-----~~~~~~~~~l~~-~g~~~~~~~~~~~~~~H~~~~~~~~ 295 (316)
..... .. +.. ++.|..|.. |. .. ....+..+.++. .|. .+.+..+++.+|+-..
T Consensus 183 ----~~~~~--~~-~~~--~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~f~~~~~~~H~~~~---- 247 (264)
T COG2819 183 ----IESLK--LL-KTK--RICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGA--RLVFQEEPLEHHGSVI---- 247 (264)
T ss_pred ----ccccc--cC-CCc--ceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCC--ceEecccccccccchH----
Confidence 00000 01 111 444444443 32 22 244555666666 777 8899999998896552
Q ss_pred cHHHHHHHHHHHHHHhc
Q 043192 296 SLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 296 ~~~~~~~~~~i~~fl~~ 312 (316)
...+...+.|+..
T Consensus 248 ----~~~~~~al~~l~~ 260 (264)
T COG2819 248 ----HASLPSALRFLDC 260 (264)
T ss_pred ----HHHHHHHHHhhhc
Confidence 3556667777754
No 137
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.64 E-value=7e-08 Score=84.41 Aligned_cols=111 Identities=21% Similarity=0.225 Sum_probs=66.8
Q ss_pred CCCccEEEEEcCCcccccCc-chhhhHHHHHHHHHh--cCcEEEeecCCCCCCCCCCcch-------hhHHHHHHHHHHh
Q 043192 65 NQKLPLVVYFHGGAFIFENA-FSLTYHAYMNTLVSH--AKIIAVSVDYRRAPEDPVPAAH-------EDSWTALKWVASH 134 (316)
Q Consensus 65 ~~~~p~vv~iHGgg~~~g~~-~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~~~~~-------~d~~~~~~~l~~~ 134 (316)
+..+|+++++|| | .++. ...........++.+ .++.|+++||.......+.... +.+...+.+|.+.
T Consensus 68 n~~~pt~iiiHG--w-~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSKPTVIIIHG--W-TGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTSEEEEEE----T-T-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--c-CCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 356899999999 3 2333 222344555666666 6899999999854333343333 2344445555533
Q ss_pred cCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 135 ANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 135 ~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
. .++.++|.|+|||+||++|..++.+... ..++..+..+.|.--
T Consensus 145 ~-----------g~~~~~ihlIGhSLGAHvaG~aG~~~~~----~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 145 F-----------GVPPENIHLIGHSLGAHVAGFAGKYLKG----GGKIGRITGLDPAGP 188 (331)
T ss_dssp H--------------GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-T
T ss_pred c-----------CCChhHEEEEeeccchhhhhhhhhhccC----cceeeEEEecCcccc
Confidence 2 4889999999999999999999988754 136888888887653
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.62 E-value=1.1e-05 Score=70.10 Aligned_cols=204 Identities=10% Similarity=0.072 Sum_probs=126.2
Q ss_pred EEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC-----C-----
Q 043192 44 IIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA-----P----- 113 (316)
Q Consensus 44 v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-----~----- 113 (316)
+.+..++.-.+-+|.|... ...+-+||+|||-|. ++++.+.-..+++-+.++|+.++++..+.- +
T Consensus 65 ~~L~~~~~~flaL~~~~~~--~~~~G~vIilp~~g~---~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANS--AKPQGAVIILPDWGE---HPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred EEeecCCEEEEEEEecccC--CCCceEEEEecCCCC---CCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCC
Confidence 3445566778889999876 467789999999664 333334556666667788999998765530 0
Q ss_pred --------CCCCC----------------------cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHH
Q 043192 114 --------EDPVP----------------------AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGN 163 (316)
Q Consensus 114 --------~~~~~----------------------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~ 163 (316)
..... ....-+.+++.++.+.. ..+|+|+||+.|+.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~--------------~~~ivlIg~G~gA~ 205 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG--------------GKNIVLIGHGTGAG 205 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC--------------CceEEEEEeChhHH
Confidence 00000 01223445555555543 24599999999999
Q ss_pred HHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCC
Q 043192 164 IAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLG 243 (316)
Q Consensus 164 ~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (316)
+++.+....+. ..++++|++++........ .. ....+.++.
T Consensus 206 ~~~~~la~~~~-----~~~daLV~I~a~~p~~~~n------~~----------------------------l~~~la~l~ 246 (310)
T PF12048_consen 206 WAARYLAEKPP-----PMPDALVLINAYWPQPDRN------PA----------------------------LAEQLAQLK 246 (310)
T ss_pred HHHHHHhcCCC-----cccCeEEEEeCCCCcchhh------hh----------------------------HHHHhhccC
Confidence 99999987643 3589999999876322110 00 000445565
Q ss_pred CCcEEEEEcCCccccchHHHHHHHHH-hCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 244 CNRLLVFVAQLDLLRGRGLYYVTKLK-ESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 244 ~~P~li~~G~~D~~~~~~~~~~~~l~-~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
. |+|=++.............++.+. .+... ..+-+.+.+..|.+. .....+.+.|..||+.+
T Consensus 247 i-PvLDi~~~~~~~~~~~a~~R~~~a~r~~~~-~YrQ~~L~~~~~~~~------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 247 I-PVLDIYSADNPASQQTAKQRKQAAKRNKKP-DYRQIQLPGLPDNPS------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred C-CEEEEecCCChHHHHHHHHHHHHHHhccCC-CceeEecCCCCCChh------hHHHHHHHHHHHHHHhh
Confidence 6 999888887443433333333332 22221 466667778777443 23344999999999876
No 139
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.61 E-value=5.6e-06 Score=71.51 Aligned_cols=104 Identities=14% Similarity=0.192 Sum_probs=67.9
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHH-HHHHHHhcCcEEEeecCCCCCCC-----------C--
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAY-MNTLVSHAKIIAVSVDYRRAPED-----------P-- 116 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~-~~~l~~~~g~~v~~~d~r~~~~~-----------~-- 116 (316)
.-+..+..|+.. ....+|++|.+.|.| +..-..-..+ ...|+++ |+..+.+.-+..+.. .
T Consensus 76 ~a~~~~~~P~~~-~~~~rp~~IhLagTG----Dh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~Vs 149 (348)
T PF09752_consen 76 TARFQLLLPKRW-DSPYRPVCIHLAGTG----DHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVS 149 (348)
T ss_pred heEEEEEECCcc-ccCCCceEEEecCCC----ccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchh
Confidence 345667778765 234689999999844 3321111233 5667777 999888764322111 0
Q ss_pred -----CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhc
Q 043192 117 -----VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 117 -----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
.-..+.++...+.|+.++. ..+++|.|.||||++|...+...+.
T Consensus 150 Dl~~~g~~~i~E~~~Ll~Wl~~~G--------------~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 150 DLFVMGRATILESRALLHWLEREG--------------YGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcC--------------CCceEEEEechhHhhHHhhhhcCCC
Confidence 1223567778888998873 3599999999999999998887643
No 140
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.55 E-value=9.6e-06 Score=66.24 Aligned_cols=204 Identities=18% Similarity=0.170 Sum_probs=114.8
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC----cEEEeecCCCC----------------------CCCCCCcc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK----IIAVSVDYRRA----------------------PEDPVPAA 120 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~----------------------~~~~~~~~ 120 (316)
..| .|||||.| |+.+ ....++.++..+.. ..++.+|-.++ ...+....
T Consensus 45 ~iP-TIfIhGsg---G~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIP-TIFIHGSG---GTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccc-eEEEecCC---CChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 345 48999955 5554 35677777777642 23444443321 11223334
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCC
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPG 200 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 200 (316)
..-+..++.+|.++ .+..++-++||||||.....++..+..+.- -+.++..+.+.+.++.......
T Consensus 119 s~wlk~~msyL~~~-------------Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks-~P~lnK~V~l~gpfN~~~l~~d 184 (288)
T COG4814 119 SKWLKKAMSYLQKH-------------YNIPKFNAVGHSMGGLGLTYYMIDYGDDKS-LPPLNKLVSLAGPFNVGNLVPD 184 (288)
T ss_pred HHHHHHHHHHHHHh-------------cCCceeeeeeeccccHHHHHHHHHhcCCCC-CcchhheEEecccccccccCCC
Confidence 55677888888887 677899999999999999999998876542 3567888887776652222111
Q ss_pred CCCCCC-cccc-cchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCcc------ccc--hHHHHHHHHHh
Q 043192 201 EPYVPE-YWTT-IIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDL------LRG--RGLYYVTKLKE 270 (316)
Q Consensus 201 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~------~~~--~~~~~~~~l~~ 270 (316)
...... ...+ .....+..|.... +..+++- . .+|++.|+.|. .++ .+...+..+..
T Consensus 185 e~v~~v~~~~~~~~~t~y~~y~~~n----~k~v~~~---------~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~ 250 (288)
T COG4814 185 ETVTDVLKDGPGLIKTPYYDYIAKN----YKKVSPN---------T-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKK 250 (288)
T ss_pred cchheeeccCccccCcHHHHHHHhc----ceeCCCC---------c-EEEEEecccccCCcCCCceechHhHHHHHHhcc
Confidence 111000 0010 1111111111111 0111111 1 69999999884 232 34445555555
Q ss_pred CCCCcccEEEEe--CCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 271 SGWKGDAKVSEI--MGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 271 ~g~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.+. ...-.+| +.+.|.-. .+...+.+.+..||.+
T Consensus 251 ~~k--sy~e~~~~Gk~a~Hs~l------hen~~v~~yv~~FLw~ 286 (288)
T COG4814 251 NGK--SYIESLYKGKDARHSKL------HENPTVAKYVKNFLWE 286 (288)
T ss_pred Ccc--eeEEEeeeCCcchhhcc------CCChhHHHHHHHHhhc
Confidence 554 2222234 45678544 3335788889999876
No 141
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.53 E-value=8e-07 Score=72.08 Aligned_cols=211 Identities=12% Similarity=0.049 Sum_probs=99.2
Q ss_pred eEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC----C----C
Q 043192 43 DIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA----P----E 114 (316)
Q Consensus 43 ~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----~----~ 114 (316)
-+...++..+.+.--.|++.. ....+.||+-.|-|- ... .+...+.+++ ..||.|+.+|.-.+ . +
T Consensus 6 vi~~~~~~~I~vwet~P~~~~-~~~~~tiliA~Gf~r---rmd--h~agLA~YL~-~NGFhViRyDsl~HvGlSsG~I~e 78 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNE-PKRNNTILIAPGFAR---RMD--HFAGLAEYLS-ANGFHVIRYDSLNHVGLSSGDINE 78 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS----S-EEEEE-TT-G---GGG--GGHHHHHHHH-TTT--EEEE---B-----------
T ss_pred eeEcCCCCEEEEeccCCCCCC-cccCCeEEEecchhH---HHH--HHHHHHHHHh-hCCeEEEeccccccccCCCCChhh
Confidence 345555545555555676543 345688888887331 111 3445555554 45999999995522 1 1
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccC
Q 043192 115 DPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 115 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
.++...-.|+..+++||++.+ ..+++|+-.|.-|.+|...+.+. .+..+|..-+..+.
T Consensus 79 ftms~g~~sL~~V~dwl~~~g--------------~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnl 136 (294)
T PF02273_consen 79 FTMSIGKASLLTVIDWLATRG--------------IRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNL 136 (294)
T ss_dssp --HHHHHHHHHHHHHHHHHTT-----------------EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-H
T ss_pred cchHHhHHHHHHHHHHHHhcC--------------CCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeH
Confidence 223344578999999999653 46899999999999999998753 36667766676554
Q ss_pred CCCCCCCCCCCCc-------------c-cc-cchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc
Q 043192 195 SAPIPGEPYVPEY-------------W-TT-IIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG 259 (316)
Q Consensus 195 ~~~~~~~~~~~~~-------------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~ 259 (316)
............+ . .. ....+....... .-+..-+... +++.+.+ |++.+++++|..++
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~---~w~~l~ST~~--~~k~l~i-P~iaF~A~~D~WV~ 210 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEH---GWDDLDSTIN--DMKRLSI-PFIAFTANDDDWVK 210 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHT---T-SSHHHHHH--HHTT--S--EEEEEETT-TTS-
T ss_pred HHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHc---CCccchhHHH--HHhhCCC-CEEEEEeCCCcccc
Confidence 3221110000000 0 00 000111111110 0011111111 5667777 99999999999997
Q ss_pred hHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 260 RGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 260 ~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
+.+ ..+.+...+ ++.+++..++|+.|...
T Consensus 211 q~e-V~~~~~~~~-s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 211 QSE-VEELLDNIN-SNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHH-HHHHHTT-T-T--EEEEEETT-SS-TT
T ss_pred HHH-HHHHHHhcC-CCceeEEEecCccchhh
Confidence 654 233333222 22789999999999766
No 142
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.51 E-value=1.6e-06 Score=72.81 Aligned_cols=155 Identities=15% Similarity=0.107 Sum_probs=86.2
Q ss_pred chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC
Q 043192 120 AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP 199 (316)
Q Consensus 120 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 199 (316)
..+-+..++.+|++. ...+++-++||||||..++.++..+..+. ..+.++.+|.+++-+++.....
T Consensus 85 qa~wl~~vl~~L~~~-------------Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~~~~~ 150 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKK-------------YHFKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGILGMN 150 (255)
T ss_dssp HHHHHHHHHHHHHHC-------------C--SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTTTCCS
T ss_pred HHHHHHHHHHHHHHh-------------cCCCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCcccccc
Confidence 345567777788775 56789999999999999999999876543 1347899999998877654322
Q ss_pred CCCCCCCcc---cccchhhhhhhCCCCCCCCCCccCCCCCCc-ccCCCC-CcEEEEEcC------Cccccc--hHHHHHH
Q 043192 200 GEPYVPEYW---TTIIDEPWQIARPDTSGLDDPIINPVADPK-LSSLGC-NRLLVFVAQ------LDLLRG--RGLYYVT 266 (316)
Q Consensus 200 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~P~li~~G~------~D~~~~--~~~~~~~ 266 (316)
.......+. .......+..+.. . -..+|. ..+|-|.|. .|-.|+ .+..+.-
T Consensus 151 ~~~~~~~~~~~gp~~~~~~y~~l~~----------------~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~ 214 (255)
T PF06028_consen 151 DDQNQNDLNKNGPKSMTPMYQDLLK----------------NRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRY 214 (255)
T ss_dssp C-TTTT-CSTT-BSS--HHHHHHHH----------------THGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHH
T ss_pred ccchhhhhcccCCcccCHHHHHHHH----------------HHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHH
Confidence 111000000 0011111111111 1 012220 169999998 555664 3343433
Q ss_pred HHHhCCCCcccEEEEeCC--CcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 267 KLKESGWKGDAKVSEIMG--ETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 267 ~l~~~g~~~~~~~~~~~~--~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
.++.... ..+-..+.| +.|.-. .+-.++.+.|.+||.+
T Consensus 215 L~~~~~~--~Y~e~~v~G~~a~HS~L------heN~~V~~~I~~FLw~ 254 (255)
T PF06028_consen 215 LLKNRAK--SYQEKTVTGKDAQHSQL------HENPQVDKLIIQFLWG 254 (255)
T ss_dssp HCTTTSS--EEEEEEEESGGGSCCGG------GCCHHHHHHHHHHHCT
T ss_pred HhhcccC--ceEEEEEECCCCccccC------CCCHHHHHHHHHHhcC
Confidence 4444333 556666654 678554 3336888999999864
No 143
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.50 E-value=4.9e-06 Score=74.13 Aligned_cols=133 Identities=15% Similarity=0.157 Sum_probs=89.2
Q ss_pred ceeeeEEecCCCceEEEEE-ecCCCCCCCCccEEEEEcCCcccccCcchh---hhHHHHHHHHHhcCcEEEeecCCCCC-
Q 043192 39 VDSKDIIYSSEHNLSARIY-FPNNTNRNQKLPLVVYFHGGAFIFENAFSL---TYHAYMNTLVSHAKIIAVSVDYRRAP- 113 (316)
Q Consensus 39 ~~~~~v~~~~~~~~~~~~~-~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~---~~~~~~~~l~~~~g~~v~~~d~r~~~- 113 (316)
...++-.+.+.++--+.+. .|... +++|+|++.|| ...+...+ +-..-++.++.+.||-|..-+-|+..
T Consensus 46 y~~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HG---Ll~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~y 119 (403)
T KOG2624|consen 46 YPVEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHG---LLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTY 119 (403)
T ss_pred CceEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeec---cccccccceecCccccHHHHHHHcCCceeeecCcCccc
Confidence 3344444544444433333 35433 68899999999 33333210 01234567778889999999988641
Q ss_pred -----------CC-----CCCc-chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhccc
Q 043192 114 -----------ED-----PVPA-AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEK 176 (316)
Q Consensus 114 -----------~~-----~~~~-~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~ 176 (316)
+. +|.. ...|+-+.++++.+. ...++++.+|||.|+.....++...+..
T Consensus 120 Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~-------------T~~~kl~yvGHSQGtt~~fv~lS~~p~~- 185 (403)
T KOG2624|consen 120 SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK-------------TGQEKLHYVGHSQGTTTFFVMLSERPEY- 185 (403)
T ss_pred chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh-------------ccccceEEEEEEccchhheehhcccchh-
Confidence 11 1111 357999999999886 5568999999999999999988876442
Q ss_pred ccCCccceeEEeccccc
Q 043192 177 LEGINIDGICLLFPYFW 193 (316)
Q Consensus 177 ~~~~~~~~~i~~~p~~~ 193 (316)
..+|+..++++|...
T Consensus 186 --~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 186 --NKKIKSFIALAPAAF 200 (403)
T ss_pred --hhhhheeeeecchhh
Confidence 246999999999763
No 144
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.48 E-value=3.9e-06 Score=67.25 Aligned_cols=109 Identities=18% Similarity=0.140 Sum_probs=69.0
Q ss_pred EEEEeechHHHHHHHHHHHhhcc--cccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCc
Q 043192 153 VILSGDSAGGNIAHHMGIRQGQE--KLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPI 230 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~~~~--~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (316)
=+|+|+|.|+.++..++...... ....+.++-+|++|++........+. .
T Consensus 106 DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~---------------------------~- 157 (230)
T KOG2551|consen 106 DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDES---------------------------A- 157 (230)
T ss_pred ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhh---------------------------h-
Confidence 37999999999999998822111 11245679999999987432111000 0
Q ss_pred cCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHH
Q 043192 231 INPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVD 308 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~ 308 (316)
....+.+ |.|-+.|+.|.++. .+..+++... +..++..+| +|.+-.. ....+.+.+
T Consensus 158 -------~~~~i~~-PSLHi~G~~D~iv~~~~s~~L~~~~~------~a~vl~Hpg-gH~VP~~-------~~~~~~i~~ 215 (230)
T KOG2551|consen 158 -------YKRPLST-PSLHIFGETDTIVPSERSEQLAESFK------DATVLEHPG-GHIVPNK-------AKYKEKIAD 215 (230)
T ss_pred -------hccCCCC-CeeEEecccceeecchHHHHHHHhcC------CCeEEecCC-CccCCCc-------hHHHHHHHH
Confidence 1223445 99999999999885 4577777766 456777777 7944421 244555555
Q ss_pred HHh
Q 043192 309 FIH 311 (316)
Q Consensus 309 fl~ 311 (316)
||+
T Consensus 216 fi~ 218 (230)
T KOG2551|consen 216 FIQ 218 (230)
T ss_pred HHH
Confidence 554
No 145
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.47 E-value=6.7e-06 Score=68.62 Aligned_cols=124 Identities=18% Similarity=0.284 Sum_probs=78.7
Q ss_pred eeEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc
Q 043192 42 KDIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA 119 (316)
Q Consensus 42 ~~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~ 119 (316)
..+.++. +..+.+.-.+-...+...+..+||-+||.. |+..+ + .+++..+.+.|+.++.++|++.+..+.+.
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsP---GSH~D--F-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~ 80 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSP---GSHND--F-KYIRPPLDEAGIRFIGINYPGFGFTPGYP 80 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCC---CCccc--h-hhhhhHHHHcCeEEEEeCCCCCCCCCCCc
Confidence 3444444 233455433332222234667999999944 66552 3 55667778889999999999875443222
Q ss_pred c----hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 120 A----HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 120 ~----~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
. ..+-...+..|.+.. .++ ++++.+|||.|+-.|+.++... ...|+++++|.
T Consensus 81 ~~~~~n~er~~~~~~ll~~l-----------~i~-~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~ 136 (297)
T PF06342_consen 81 DQQYTNEERQNFVNALLDEL-----------GIK-GKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPP 136 (297)
T ss_pred ccccChHHHHHHHHHHHHHc-----------CCC-CceEEEEeccchHHHHHHHhcC--------ccceEEEecCC
Confidence 1 223333344444433 255 7899999999999999999986 25688888874
No 146
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.45 E-value=1.9e-06 Score=71.43 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=64.2
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHh-------cCcEEEeecCCCCCCC----CCCcchhhHHHHHHHHHHhcC
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSH-------AKIIAVSVDYRRAPED----PVPAAHEDSWTALKWVASHAN 136 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~-------~g~~v~~~d~r~~~~~----~~~~~~~d~~~~~~~l~~~~~ 136 (316)
...||||||-+ |+.. .++.+...+..+ ..+.++.+||...... ......+-+..+++.+.+...
T Consensus 4 g~pVlFIhG~~---Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNA---GSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCC---CCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhh
Confidence 35699999933 4433 344444333111 2477888888753211 122233445566666665531
Q ss_pred CCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 137 GRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 137 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
.. ...+++|+|+||||||.+|..++...... ...++.+|.++.
T Consensus 79 ~~--------~~~~~~vilVgHSmGGlvar~~l~~~~~~---~~~v~~iitl~t 121 (225)
T PF07819_consen 79 SN--------RPPPRSVILVGHSMGGLVARSALSLPNYD---PDSVKTIITLGT 121 (225)
T ss_pred hc--------cCCCCceEEEEEchhhHHHHHHHhccccc---cccEEEEEEEcC
Confidence 11 25678999999999999998888754322 246888886553
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.44 E-value=3.2e-06 Score=76.77 Aligned_cols=169 Identities=15% Similarity=0.149 Sum_probs=98.8
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC--cEEEeecCCCC-CCCCCCcchhhHHHHHHHHHHhcCCCCCcccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK--IIAVSVDYRRA-PEDPVPAAHEDSWTALKWVASHANGRGPEDWL 144 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 144 (316)
.|+++++||++ ..+..+ ++++.|...+.-. | ..+..+|++.. ++.......+......++.......
T Consensus 176 spl~i~aps~p-~ap~tS-d~~~~wqs~lsl~-gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~g------- 245 (784)
T KOG3253|consen 176 SPLAIKAPSTP-LAPKTS-DRMWSWQSRLSLK-GEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITG------- 245 (784)
T ss_pred CceEEeccCCC-CCCccc-hHHHhHHHHHhhh-ceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhc-------
Confidence 68999999987 222222 2344444433332 3 44556666632 2222222233333333332222211
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCC
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTS 224 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (316)
.+....|+|+|.|||+.++..++.-..+ .-++++|++.=.++..+...
T Consensus 246 --efpha~IiLvGrsmGAlVachVSpsnsd-----v~V~~vVCigypl~~vdgpr------------------------- 293 (784)
T KOG3253|consen 246 --EFPHAPIILVGRSMGALVACHVSPSNSD-----VEVDAVVCIGYPLDTVDGPR------------------------- 293 (784)
T ss_pred --cCCCCceEEEecccCceeeEEeccccCC-----ceEEEEEEecccccCCCccc-------------------------
Confidence 3566789999999997777666654332 23888887664433222110
Q ss_pred CCCCCccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccccccc
Q 043192 225 GLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLL 292 (316)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~ 292 (316)
...|. .+..+.. |+|++.|..|.... ..+++.+++++ .++++++.+++|.+..-
T Consensus 294 girDE--------~Lldmk~-PVLFV~Gsnd~mcspn~ME~vreKMqA-----~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 294 GIRDE--------ALLDMKQ-PVLFVIGSNDHMCSPNSMEEVREKMQA-----EVELHVIGGADHSMAIP 349 (784)
T ss_pred CCcch--------hhHhcCC-ceEEEecCCcccCCHHHHHHHHHHhhc-----cceEEEecCCCccccCC
Confidence 11111 2333344 99999999998774 56778888876 78999999999998854
No 148
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.42 E-value=1.7e-06 Score=72.16 Aligned_cols=100 Identities=18% Similarity=0.236 Sum_probs=65.8
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC-CCCCCcchhhHH-HHHHHHHHhcCCCCCccccccc
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP-EDPVPAAHEDSW-TALKWVASHANGRGPEDWLKTY 147 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~~~~~d~~-~~~~~l~~~~~~~~~~~~~~~~ 147 (316)
.|+++|++| |+.. .|..+++.+..+ .+.|..+++++.. .......++++. ..++.++..
T Consensus 2 ~lf~~p~~g---G~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~------------- 62 (229)
T PF00975_consen 2 PLFCFPPAG---GSAS--SYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR------------- 62 (229)
T ss_dssp EEEEESSTT---CSGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH-------------
T ss_pred eEEEEcCCc---cCHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh-------------
Confidence 589999977 3443 577777777665 5788888888653 112222333322 223344333
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
....++.|+|||+||.+|..+|.+.... ...+..++++...
T Consensus 63 ~~~gp~~L~G~S~Gg~lA~E~A~~Le~~---G~~v~~l~liD~~ 103 (229)
T PF00975_consen 63 QPEGPYVLAGWSFGGILAFEMARQLEEA---GEEVSRLILIDSP 103 (229)
T ss_dssp TSSSSEEEEEETHHHHHHHHHHHHHHHT---T-SESEEEEESCS
T ss_pred CCCCCeeehccCccHHHHHHHHHHHHHh---hhccCceEEecCC
Confidence 2224999999999999999999887654 3468888888744
No 149
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.40 E-value=1e-06 Score=72.94 Aligned_cols=70 Identities=20% Similarity=0.266 Sum_probs=57.2
Q ss_pred cEEEeecCCCCCCCCCC--------cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhh
Q 043192 102 IIAVSVDYRRAPEDPVP--------AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 102 ~~v~~~d~r~~~~~~~~--------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
|.|+++|.|+.+.++ + ...+|+...+..+.+.. ..+++.++||||||.+++.++..++
T Consensus 1 f~vi~~d~rG~g~S~-~~~~~~~~~~~~~~~~~~~~~~~~~l-------------~~~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS-PHWDPDFPDYTTDDLAADLEALREAL-------------GIKKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTTSTTSS-SCCGSGSCTHCHHHHHHHHHHHHHHH-------------TTSSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCCCCCCC-CCccCCcccccHHHHHHHHHHHHHHh-------------CCCCeEEEEECCChHHHHHHHHHCc
Confidence 578999999887655 3 23578888888888863 3456999999999999999999986
Q ss_pred cccccCCccceeEEeccc
Q 043192 174 QEKLEGINIDGICLLFPY 191 (316)
Q Consensus 174 ~~~~~~~~~~~~i~~~p~ 191 (316)
+ .+++++++++.
T Consensus 67 ~------~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 E------RVKKLVLISPP 78 (230)
T ss_dssp G------GEEEEEEESES
T ss_pred h------hhcCcEEEeee
Confidence 5 59999999985
No 150
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.37 E-value=1.3e-05 Score=70.61 Aligned_cols=214 Identities=13% Similarity=0.136 Sum_probs=130.9
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCc---ccccCcchhhhHHHHHHHHHhcCcEEEeec----CCC-C----------
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGA---FIFENAFSLTYHAYMNTLVSHAKIIAVSVD----YRR-A---------- 112 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg---~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d----~r~-~---------- 112 (316)
.+.+.++.|++. .....++++|.||. +...... .....+..+|...|.+|+.+. .++ .
T Consensus 49 ~H~l~I~vP~~~--~~~~~all~i~gG~~~~~~~~~~~--~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED 124 (367)
T PF10142_consen 49 WHWLTIYVPKND--KNPDTALLFITGGSNRNWPGPPPD--FDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTED 124 (367)
T ss_pred EEEEEEEECCCC--CCCceEEEEEECCcccCCCCCCCc--chHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHH
Confidence 467889999983 35668999999987 2222222 345778889999998887653 111 0
Q ss_pred -------------CCCCCCc---chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhccc
Q 043192 113 -------------PEDPVPA---AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEK 176 (316)
Q Consensus 113 -------------~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~ 176 (316)
.+..++. +.+-+..+++.+++...... .++.++.+|.|.|=-|..+...|..
T Consensus 125 ~iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~-------~~~i~~FvV~GaSKRGWTtWltaa~----- 192 (367)
T PF10142_consen 125 AIIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKF-------GVNIEKFVVTGASKRGWTTWLTAAV----- 192 (367)
T ss_pred HHHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhc-------CCCccEEEEeCCchHhHHHHHhhcc-----
Confidence 0112222 23444555555555433221 3788999999999999999998874
Q ss_pred ccCCccceeEEe-cccccCCCCCCCCCCCCCcccccchhhhhhhCCCC-------------CCCCCC-------ccCCCC
Q 043192 177 LEGINIDGICLL-FPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDT-------------SGLDDP-------IINPVA 235 (316)
Q Consensus 177 ~~~~~~~~~i~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-------~~~~~~ 235 (316)
.++|+|++-+ .+..+.. ..+...++.|.+.. .....+ .+.|+.
T Consensus 193 --D~RV~aivP~Vid~LN~~--------------~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~ 256 (367)
T PF10142_consen 193 --DPRVKAIVPIVIDVLNMK--------------ANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYS 256 (367)
T ss_pred --CcceeEEeeEEEccCCcH--------------HHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHH
Confidence 3467777632 2333222 22222222222110 000111 123333
Q ss_pred CCcccCCCCCcEEEEEcCCcccc--chHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 236 DPKLSSLGCNRLLVFVAQLDLLR--GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 236 ~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
-..++.. |-||+.|+.|.+. +.+.-+.+.|.. +..+..+|+++|.... .++.+.+..|+..
T Consensus 257 --Y~~rL~~-PK~ii~atgDeFf~pD~~~~y~d~L~G-----~K~lr~vPN~~H~~~~--------~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 257 --YRDRLTM-PKYIINATGDEFFVPDSSNFYYDKLPG-----EKYLRYVPNAGHSLIG--------SDVVQSLRAFYNR 319 (367)
T ss_pred --HHHhcCc-cEEEEecCCCceeccCchHHHHhhCCC-----CeeEEeCCCCCcccch--------HHHHHHHHHHHHH
Confidence 2345555 8999999999854 678888888874 6799999999997662 4667777777754
No 151
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.35 E-value=5.3e-06 Score=66.85 Aligned_cols=190 Identities=13% Similarity=0.114 Sum_probs=102.9
Q ss_pred hHHHHHHHHHhcCcEEEeecCCCCCCCCC-----------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEe
Q 043192 89 YHAYMNTLVSHAKIIAVSVDYRRAPEDPV-----------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSG 157 (316)
Q Consensus 89 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G 157 (316)
|+.++ .++++.||.|+.+|||+.+++.- +-...|+..++.++++..+ ......+|
T Consensus 46 YRrfA-~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~-------------~~P~y~vg 111 (281)
T COG4757 46 YRRFA-AAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP-------------GHPLYFVG 111 (281)
T ss_pred hHHHH-HHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCC-------------CCceEEee
Confidence 44554 55566799999999998765432 1124689999999998643 25799999
Q ss_pred echHHHHHHHHHHHhhcccccCCccceeE------EecccccCCCCCCCCC---CC-CC-----------------cccc
Q 043192 158 DSAGGNIAHHMGIRQGQEKLEGINIDGIC------LLFPYFWGSAPIPGEP---YV-PE-----------------YWTT 210 (316)
Q Consensus 158 ~S~GG~~a~~~a~~~~~~~~~~~~~~~~i------~~~p~~~~~~~~~~~~---~~-~~-----------------~~~~ 210 (316)
||+||++.-.+..+. +..+.. .++++....+...... .. +. ....
T Consensus 112 HS~GGqa~gL~~~~~--------k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~ 183 (281)
T COG4757 112 HSFGGQALGLLGQHP--------KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPG 183 (281)
T ss_pred ccccceeecccccCc--------ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcc
Confidence 999998765554432 122111 1233222111110000 00 00 0011
Q ss_pred cchhhhhhhCCCC-CCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccch--HHHHHHHHHhCCCCcccEEEEeCCC--
Q 043192 211 IIDEPWQIARPDT-SGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGR--GLYYVTKLKESGWKGDAKVSEIMGE-- 285 (316)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~-- 285 (316)
....-|..++--. ....++.+.-+.. ..+++.+ |+..+...+|+-.+. .+.|......+ +.+.+.++..
T Consensus 184 ~v~RdW~RwcR~p~y~fddp~~~~~~q-~yaaVrt-Pi~~~~~~DD~w~P~As~d~f~~~y~nA----pl~~~~~~~~~~ 257 (281)
T COG4757 184 TVMRDWARWCRHPRYYFDDPAMRNYRQ-VYAAVRT-PITFSRALDDPWAPPASRDAFASFYRNA----PLEMRDLPRAEG 257 (281)
T ss_pred hHHHHHHHHhcCccccccChhHhHHHH-HHHHhcC-ceeeeccCCCCcCCHHHHHHHHHhhhcC----cccceecCcccC
Confidence 1222244443322 1222222211111 4456677 999999999987753 35566665554 4577766544
Q ss_pred --cccccccCCCcHHHHHHHHHHHHHH
Q 043192 286 --THVFHLLNPSSLHAIRMLKTTVDFI 310 (316)
Q Consensus 286 --~H~~~~~~~~~~~~~~~~~~i~~fl 310 (316)
+|.=....+ .+..++++++|+
T Consensus 258 ~lGH~gyfR~~----~Ealwk~~L~w~ 280 (281)
T COG4757 258 PLGHMGYFREP----FEALWKEMLGWF 280 (281)
T ss_pred cccchhhhccc----hHHHHHHHHHhh
Confidence 784332222 266777888876
No 152
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.32 E-value=5.4e-05 Score=58.65 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=64.7
Q ss_pred CccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCC
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDP 229 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
++.++|++||.|+..++.++.+... +++|+++++|.-......... ...
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~------~V~GalLVAppd~~~~~~~~~-------------~~~------------ 106 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR------QVAGALLVAPPDVSRPEIRPK-------------HLM------------ 106 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh------ccceEEEecCCCccccccchh-------------hcc------------
Confidence 3569999999999999999988643 699999999976433211000 000
Q ss_pred ccCCCCCCcccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCccc
Q 043192 230 IINPVADPKLSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHV 288 (316)
Q Consensus 230 ~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~ 288 (316)
.+.+. ....++. |.++++..+|+.+. .++.+++.. ...++....+||.
T Consensus 107 tf~~~---p~~~lpf-ps~vvaSrnDp~~~~~~a~~~a~~w-------gs~lv~~g~~GHi 156 (181)
T COG3545 107 TFDPI---PREPLPF-PSVVVASRNDPYVSYEHAEDLANAW-------GSALVDVGEGGHI 156 (181)
T ss_pred ccCCC---ccccCCC-ceeEEEecCCCCCCHHHHHHHHHhc-------cHhheeccccccc
Confidence 01111 3344555 99999999999885 455555544 3577777788884
No 153
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.28 E-value=1.5e-05 Score=67.96 Aligned_cols=112 Identities=18% Similarity=0.268 Sum_probs=78.3
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHh--cCcEEEeecCCCCCCCCC----------CcchhhHHHHHHHHHHhc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSH--AKIIAVSVDYRRAPEDPV----------PAAHEDSWTALKWVASHA 135 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~----------~~~~~d~~~~~~~l~~~~ 135 (316)
++++++|.|-. |... .|..|+..+.+. ..+.|+++.+.+...... -..-+++...++++++..
T Consensus 2 ~~li~~IPGNP---Glv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNP---GLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCC---ChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 47899999833 4444 567888888777 469999999886532221 122355666667776664
Q ss_pred CCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 136 NGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 136 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
.... -...+++|+|||.|+.+++.++.+.++. ..++++++++.|.+.-.
T Consensus 77 ~~~~--------~~~~~liLiGHSIGayi~levl~r~~~~---~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 77 PQKN--------KPNVKLILIGHSIGAYIALEVLKRLPDL---KFRVKKVILLFPTIEDI 125 (266)
T ss_pred hhhc--------CCCCcEEEEeCcHHHHHHHHHHHhcccc---CCceeEEEEeCCccccc
Confidence 3210 1457899999999999999999998621 35799999999987433
No 154
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.27 E-value=1.9e-05 Score=63.15 Aligned_cols=107 Identities=17% Similarity=0.078 Sum_probs=73.3
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC----CCCCCCcchhhHHHHHHHHHHhcCCCCCcccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA----PEDPVPAAHEDSWTALKWVASHANGRGPEDWL 144 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 144 (316)
-.||||-| ...|-... .+...+.+.+.+.+|..+.+..+-+ +..+..+..+|+..+++++...
T Consensus 37 ~~vvfiGG--LgdgLl~~-~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~---------- 103 (299)
T KOG4840|consen 37 VKVVFIGG--LGDGLLIC-LYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLC---------- 103 (299)
T ss_pred EEEEEEcc--cCCCcccc-ccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhcc----------
Confidence 44566644 22333332 3556667777888999998886644 3345566677888888766543
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
-...+|+|+|||.|..-.+.+...... +..+.+.|+.+|+.+..
T Consensus 104 ---~fSt~vVL~GhSTGcQdi~yYlTnt~~----~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 104 ---GFSTDVVLVGHSTGCQDIMYYLTNTTK----DRKIRAAILQAPVSDRE 147 (299)
T ss_pred ---CcccceEEEecCccchHHHHHHHhccc----hHHHHHHHHhCccchhh
Confidence 223589999999999999999855433 33688999999988654
No 155
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.20 E-value=2.2e-06 Score=65.61 Aligned_cols=187 Identities=17% Similarity=0.137 Sum_probs=108.7
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC---CCCcc---hhhHHHHHHHHHHhcCCCC
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED---PVPAA---HEDSWTALKWVASHANGRG 139 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~---~~~~~---~~d~~~~~~~l~~~~~~~~ 139 (316)
+..|||+|---+|-....- ..+...-++.+.++.-...+.++--- .++ .+... ++--.+.-+|+.++.
T Consensus 25 aG~pVvvFpts~Grf~eye-d~G~v~ala~fie~G~vQlft~~gld-sESf~a~h~~~adr~~rH~AyerYv~eEa---- 98 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYE-DFGMVDALASFIEEGLVQLFTLSGLD-SESFLATHKNAADRAERHRAYERYVIEEA---- 98 (227)
T ss_pred CCCcEEEEecCCCcchhhh-hcccHHHHHHHHhcCcEEEEEecccc-hHhHhhhcCCHHHHHHHHHHHHHHHHHhh----
Confidence 3458888876554221111 11223344555555334455554211 111 11111 222234456777663
Q ss_pred CcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhh
Q 043192 140 PEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIA 219 (316)
Q Consensus 140 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (316)
-+.+..+.|.||||..|+.+..++|. .+.++|.+|+.++..+..........+..... .|
T Consensus 99 ---------lpgs~~~sgcsmGayhA~nfvfrhP~------lftkvialSGvYdardffg~yyddDv~ynsP~-----dy 158 (227)
T COG4947 99 ---------LPGSTIVSGCSMGAYHAANFVFRHPH------LFTKVIALSGVYDARDFFGGYYDDDVYYNSPS-----DY 158 (227)
T ss_pred ---------cCCCccccccchhhhhhhhhheeChh------HhhhheeecceeeHHHhccccccCceeecChh-----hh
Confidence 24678999999999999999999854 68999999999987655544432222111000 11
Q ss_pred CCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCccccc
Q 043192 220 RPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFH 290 (316)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~ 290 (316)
.+. ..++ . .+..++..-+.+++|.+|+..+....+.+.|.+..+ +..+..+.|..|.+.
T Consensus 159 lpg---~~dp----~---~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqi--paw~~~WggvaHdw~ 217 (227)
T COG4947 159 LPG---LADP----F---RLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQI--PAWMHVWGGVAHDWG 217 (227)
T ss_pred ccC---CcCh----H---HHHHHhhccEEEEecCccccccchHHHHHHhccccc--cHHHHHhcccccccH
Confidence 111 1111 1 222232225888999999999888889999998888 778888888888554
No 156
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.15 E-value=5.1e-06 Score=56.63 Aligned_cols=57 Identities=21% Similarity=0.170 Sum_probs=42.6
Q ss_pred CceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC
Q 043192 50 HNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP 116 (316)
Q Consensus 50 ~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 116 (316)
.++.++.|.|++. ++.+|+++||-+...+ .|..++..|++ .||.|+.+|+|+.+.+.
T Consensus 2 ~~L~~~~w~p~~~----~k~~v~i~HG~~eh~~-----ry~~~a~~L~~-~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 2 TKLFYRRWKPENP----PKAVVVIVHGFGEHSG-----RYAHLAEFLAE-QGYAVFAYDHRGHGRSE 58 (79)
T ss_pred cEEEEEEecCCCC----CCEEEEEeCCcHHHHH-----HHHHHHHHHHh-CCCEEEEECCCcCCCCC
Confidence 3678889999754 6789999999553322 46666666655 59999999999887654
No 157
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.06 E-value=8e-06 Score=66.96 Aligned_cols=83 Identities=23% Similarity=0.254 Sum_probs=45.7
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcE---EEeecCCCCCCCCCCcc-------hhhHHHHHHHHHHhcCCCCC
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKII---AVSVDYRRAPEDPVPAA-------HEDSWTALKWVASHANGRGP 140 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~~~~~ 140 (316)
|||+||-+ ++... .|..+.+.|.++ ||. +++++|-.......... .+++.+.++-+.+.
T Consensus 4 VVlVHG~~---~~~~~-~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~------ 72 (219)
T PF01674_consen 4 VVLVHGTG---GNAYS-NWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY------ 72 (219)
T ss_dssp EEEE--TT---TTTCG-GCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH------
T ss_pred EEEECCCC---cchhh-CHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh------
Confidence 79999944 32221 455666666555 999 79999865433111111 23455555555443
Q ss_pred cccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 141 EDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 141 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
... +|-|+||||||.++..+....
T Consensus 73 -------TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 73 -------TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -------HT---EEEEEETCHHHHHHHHHHHC
T ss_pred -------hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 345 999999999999999997643
No 158
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.01 E-value=0.00049 Score=59.83 Aligned_cols=64 Identities=16% Similarity=0.006 Sum_probs=45.0
Q ss_pred ccCCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 239 LSSLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 239 ~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
+++++. |+|++-=+.|.+.+ +++++.+.|..++ . -.++-...||.-++. +...+...|..||+.
T Consensus 302 l~~i~~-~~lv~gi~sD~lfp~~~~~~~~~~L~~~~---~-~~~i~S~~GHDaFL~-----e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKA-PVLVVGITSDWLFPPELQRALAEALPAAG---A-LREIDSPYGHDAFLV-----ESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCcc-CEEEEEecccccCCHHHHHHHHHhccccC---c-eEEecCCCCchhhhc-----chhhhhHHHHHHhhc
Confidence 667777 99999999998774 7788888888765 2 222334558865533 334566788888875
No 159
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.01 E-value=0.00013 Score=64.28 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=57.7
Q ss_pred HHHHHHHHhcCcEEEeecCCCCCC----CCCCcch-hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHH
Q 043192 91 AYMNTLVSHAKIIAVSVDYRRAPE----DPVPAAH-EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIA 165 (316)
Q Consensus 91 ~~~~~l~~~~g~~v~~~d~r~~~~----~~~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 165 (316)
+++..+ .+.|..|+.++++.-.. ..+.+.. +++..+++.+++. ...++|-+.|+|.||+++
T Consensus 130 s~V~~l-~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~i-------------tg~~~InliGyCvGGtl~ 195 (445)
T COG3243 130 SLVRWL-LEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDI-------------TGQKDINLIGYCVGGTLL 195 (445)
T ss_pred cHHHHH-HHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHH-------------hCccccceeeEecchHHH
Confidence 444444 55599999999885322 2334444 5566677777665 345899999999999999
Q ss_pred HHHHHHhhcccccCCccceeEEecccccC
Q 043192 166 HHMGIRQGQEKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 166 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (316)
..++...+.+ +++.+.++-...|.
T Consensus 196 ~~ala~~~~k-----~I~S~T~lts~~DF 219 (445)
T COG3243 196 AAALALMAAK-----RIKSLTLLTSPVDF 219 (445)
T ss_pred HHHHHhhhhc-----ccccceeeecchhh
Confidence 9999887653 47777755444433
No 160
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.97 E-value=7.1e-05 Score=62.44 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=64.4
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCc--EEEeecCCCCCCC-CCCcch-------hhHHHHHHHHHHhc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKI--IAVSVDYRRAPED-PVPAAH-------EDSWTALKWVASHA 135 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~--~v~~~d~r~~~~~-~~~~~~-------~d~~~~~~~l~~~~ 135 (316)
..+.++|||||.... .. ....-+.++....++ .++.+.++..+.. .|...- .++...+..|.+.
T Consensus 16 ~~~~vlvfVHGyn~~---f~--~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNS---FE--DALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCCC---HH--HHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-
Confidence 456899999993321 11 122333455555554 5777887754321 121111 2222223333222
Q ss_pred CCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhccccc---CCccceeEEecccccC
Q 043192 136 NGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLE---GINIDGICLLFPYFWG 194 (316)
Q Consensus 136 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~---~~~~~~~i~~~p~~~~ 194 (316)
....+|.|++||||+.+.+............ ..++..+++.+|-++.
T Consensus 90 ------------~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 ------------PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred ------------cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 2458999999999999999998775543310 2367888888886643
No 161
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.95 E-value=0.002 Score=57.09 Aligned_cols=224 Identities=18% Similarity=0.094 Sum_probs=125.8
Q ss_pred EEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCC---------
Q 043192 44 IIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPE--------- 114 (316)
Q Consensus 44 v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--------- 114 (316)
+-+.....+..++.+.... ..+..|++|-|-| ++.+...+......+|.+.+.+|+.++|..-..
T Consensus 14 LgikR~sKLEyri~ydd~K---e~kaIvfiI~GfG---~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~ 87 (403)
T PF11144_consen 14 LGIKRESKLEYRISYDDEK---EIKAIVFIIPGFG---ADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFY 87 (403)
T ss_pred ecccccceeeEEeecCCCC---CceEEEEEeCCcC---CCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhc
Confidence 3344444666777666543 3455666666644 444433344566778888899999999874210
Q ss_pred -----------------C-----------------------------CCC-------------c----------chhhHH
Q 043192 115 -----------------D-----------------------------PVP-------------A----------AHEDSW 125 (316)
Q Consensus 115 -----------------~-----------------------------~~~-------------~----------~~~d~~ 125 (316)
- ..+ . +.-|..
T Consensus 88 ~~~~D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~I 167 (403)
T PF11144_consen 88 FDDIDKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDII 167 (403)
T ss_pred CCHHHHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHH
Confidence 0 000 0 135778
Q ss_pred HHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC--CCCC
Q 043192 126 TALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP--GEPY 203 (316)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~--~~~~ 203 (316)
.|+.++.+.....+ +.-+++++|+|.||.+|...+.-. |-.+++++--|.+....-... .+..
T Consensus 168 NAl~~l~k~~~~~~---------~~lp~I~~G~s~G~yla~l~~k~a------P~~~~~~iDns~~~~p~l~~I~Gre~~ 232 (403)
T PF11144_consen 168 NALLDLKKIFPKNG---------GGLPKIYIGSSHGGYLAHLCAKIA------PWLFDGVIDNSSYALPPLRYIFGREID 232 (403)
T ss_pred HHHHHHHHhhhccc---------CCCcEEEEecCcHHHHHHHHHhhC------ccceeEEEecCccccchhheeeeeecC
Confidence 88888888765432 134899999999999999988765 446899987776653221100 0000
Q ss_pred ------C--C----C-cccccchhhhhhhCCCC--CCCCCCccC-CCCCC---cccCC-CCCc-EEEEEcCCccccc--h
Q 043192 204 ------V--P----E-YWTTIIDEPWQIARPDT--SGLDDPIIN-PVADP---KLSSL-GCNR-LLVFVAQLDLLRG--R 260 (316)
Q Consensus 204 ------~--~----~-~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~---~~~~~-~~~P-~li~~G~~D~~~~--~ 260 (316)
. . . ...-.....|..-.... .......+. .+... ..++. +. | .+..|+..|.+.+ +
T Consensus 233 ~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~-~~yvsYHs~~D~~~p~~~ 311 (403)
T PF11144_consen 233 FMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKK-IIYVSYHSIKDDLAPAED 311 (403)
T ss_pred cccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccc-eEEEEEeccCCCCCCHHH
Confidence 0 0 0 00112233343311110 000000000 11111 11112 22 3 4556999998774 6
Q ss_pred HHHHHHHHHhCCCCcccEEEEe-----------CCCcccccc
Q 043192 261 GLYYVTKLKESGWKGDAKVSEI-----------MGETHVFHL 291 (316)
Q Consensus 261 ~~~~~~~l~~~g~~~~~~~~~~-----------~~~~H~~~~ 291 (316)
-.++++.+++.|. ++++.++ .+..|+..+
T Consensus 312 K~~l~~~l~~lgf--da~l~lIkdes~iDGkfIKnl~HGmgi 351 (403)
T PF11144_consen 312 KEELYEILKNLGF--DATLHLIKDESEIDGKFIKNLEHGMGI 351 (403)
T ss_pred HHHHHHHHHHcCC--CeEEEEecChhhccchheeccccCCCC
Confidence 7899999999999 8888877 467787763
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=97.95 E-value=6.3e-05 Score=57.58 Aligned_cols=129 Identities=19% Similarity=0.160 Sum_probs=65.0
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCCCCCCCcccccchhhhhhhCCCCCCCCCCc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGEPYVPEYWTTIIDEPWQIARPDTSGLDDPI 230 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (316)
++..|+|-|.||..|-+++.++. +++++ +.|.+............+.. .|.+.........
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~G--------irav~-~NPav~P~e~l~gylg~~en----------~ytg~~y~le~~h 119 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLCG--------IRAVV-FNPAVRPYELLTGYLGRPEN----------PYTGQEYVLESRH 119 (191)
T ss_pred CCceEEeecchHHHHHHHHHHhC--------Chhhh-cCCCcCchhhhhhhcCCCCC----------CCCcceEEeehhh
Confidence 34999999999999999998863 55443 45544332222111110000 0000000000000
Q ss_pred cCCCCCCcccCCCCCc-EEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHH
Q 043192 231 INPVADPKLSSLGCNR-LLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDF 309 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~P-~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~f 309 (316)
+.......+..+..+- .+++.-+.|.+.+.- +..+.+. .+..++++|.+|.|..+ ...++.|+.|
T Consensus 120 I~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr-~a~a~y~------~~~~~V~dgg~H~F~~f-------~~~l~~i~aF 185 (191)
T COG3150 120 IATLCVLQFRELNRPRCLVLLSQTGDEVLDYR-QAVAYYH------PCYEIVWDGGDHKFKGF-------SRHLQRIKAF 185 (191)
T ss_pred HHHHHHhhccccCCCcEEEeecccccHHHHHH-HHHHHhh------hhhheeecCCCccccch-------HHhHHHHHHH
Confidence 0000001222332212 444455558776532 2334444 46677788899998855 4677788888
Q ss_pred Hhc
Q 043192 310 IHG 312 (316)
Q Consensus 310 l~~ 312 (316)
+.-
T Consensus 186 ~gl 188 (191)
T COG3150 186 KGL 188 (191)
T ss_pred hcc
Confidence 753
No 163
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.90 E-value=0.00026 Score=60.88 Aligned_cols=96 Identities=11% Similarity=0.165 Sum_probs=67.3
Q ss_pred CCccEEEEEcCCcccccCcch-hhhHHHHHHHHHhcCcEEEeecCCCCCCCCC----CcchhhHHHHHHHHHHhcCCCCC
Q 043192 66 QKLPLVVYFHGGAFIFENAFS-LTYHAYMNTLVSHAKIIAVSVDYRRAPEDPV----PAAHEDSWTALKWVASHANGRGP 140 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~ 140 (316)
++..-|++.-|-|........ .....++.+++.+.+.+|+.++||+-+.+.. ...+.|..+.++||+++..
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~---- 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ---- 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc----
Confidence 355678888885543333110 0122456788899999999999997654432 3446778888999987542
Q ss_pred cccccccCCCccEEEEeechHHHHHHHHHHH
Q 043192 141 EDWLKTYADFQKVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 141 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 171 (316)
++.+++|++.|||.||.++..++..
T Consensus 211 ------G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 211 ------GPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred ------CCChheEEEeeccccHHHHHHHHHh
Confidence 3678999999999999998875544
No 164
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.84 E-value=0.0016 Score=53.75 Aligned_cols=191 Identities=17% Similarity=0.136 Sum_probs=102.0
Q ss_pred EEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcch----hhHHHHHHH
Q 043192 55 RIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAH----EDSWTALKW 130 (316)
Q Consensus 55 ~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~----~d~~~~~~~ 130 (316)
++..|+. + ..||.+-||.|. |......|+.++..++++ ||.|++.-|..+ ....... +....+++.
T Consensus 9 wvl~P~~-----P-~gvihFiGGaf~-ga~P~itYr~lLe~La~~-Gy~ViAtPy~~t--fDH~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 9 WVLIPPR-----P-KGVIHFIGGAFV-GAAPQITYRYLLERLADR-GYAVIATPYVVT--FDHQAIAREVWERFERCLRA 78 (250)
T ss_pred EEEeCCC-----C-CEEEEEcCccee-ccCcHHHHHHHHHHHHhC-CcEEEEEecCCC--CcHHHHHHHHHHHHHHHHHH
Confidence 5566753 2 367888888864 566666788888888876 999999988653 2222222 334444555
Q ss_pred HHHhcCCCCCcccccccCCC--ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc-CCCCCCCCCCCCCc
Q 043192 131 VASHANGRGPEDWLKTYADF--QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW-GSAPIPGEPYVPEY 207 (316)
Q Consensus 131 l~~~~~~~~~~~~~~~~~d~--~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~-~~~~~~~~~~~~~~ 207 (316)
|.+... .+. -.++=+|||+|+-+-+.+...+.. .-++-+++|---. ..+..+-.
T Consensus 79 L~~~~~-----------~~~~~lP~~~vGHSlGcklhlLi~s~~~~------~r~gniliSFNN~~a~~aIP~~------ 135 (250)
T PF07082_consen 79 LQKRGG-----------LDPAYLPVYGVGHSLGCKLHLLIGSLFDV------ERAGNILISFNNFPADEAIPLL------ 135 (250)
T ss_pred HHHhcC-----------CCcccCCeeeeecccchHHHHHHhhhccC------cccceEEEecCChHHHhhCchH------
Confidence 554421 222 257789999999998888766533 2355555542100 00000000
Q ss_pred ccccchhhhhhhCCCCCCCCCCccCCCCCCcccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcc
Q 043192 208 WTTIIDEPWQIARPDTSGLDDPIINPVADPKLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETH 287 (316)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H 287 (316)
..........+.|...... ..+. .--.++ -++++-=.+|.+ |++..+.+.|+..... -++....+| +|
T Consensus 136 -~~l~~~l~~EF~PsP~ET~-~li~-----~~Y~~~--rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~-~~~~~~L~G-~H 203 (250)
T PF07082_consen 136 -EQLAPALRLEFTPSPEETR-RLIR-----ESYQVR--RNLLIKFNDDDI-DQTDELEQILQQRFPD-MVSIQTLPG-NH 203 (250)
T ss_pred -hhhccccccCccCCHHHHH-HHHH-----HhcCCc--cceEEEecCCCc-cchHHHHHHHhhhccc-cceEEeCCC-CC
Confidence 0000000001111100000 0000 000122 567776666766 7888888898865431 467777887 78
Q ss_pred ccc
Q 043192 288 VFH 290 (316)
Q Consensus 288 ~~~ 290 (316)
..-
T Consensus 204 LTP 206 (250)
T PF07082_consen 204 LTP 206 (250)
T ss_pred CCc
Confidence 654
No 165
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.83 E-value=0.00031 Score=59.35 Aligned_cols=219 Identities=14% Similarity=0.161 Sum_probs=115.8
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccC-cchhhhHHHHHHHHHhcCcEEEeecCCCCCCC--CCCc-----chh
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFEN-AFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED--PVPA-----AHE 122 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~-~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~--~~~~-----~~~ 122 (316)
.+.+.++--. ++++|++|=.|.=|-..-+ -......+-+..+.. .+.++=+|.++..+. .++. .++
T Consensus 10 ~v~V~v~G~~----~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd 83 (283)
T PF03096_consen 10 SVHVTVQGDP----KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGYQYPSMD 83 (283)
T ss_dssp EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-----HH
T ss_pred EEEEEEEecC----CCCCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccccccCHH
Confidence 4555555332 2378999999985532111 000011123344443 588888888765322 1221 245
Q ss_pred hHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCC---
Q 043192 123 DSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIP--- 199 (316)
Q Consensus 123 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~--- 199 (316)
++.+.+..+.++ +..+.++-+|--+||++-..+|..+++ ++.|+|+++|.........
T Consensus 84 ~LAe~l~~Vl~~-------------f~lk~vIg~GvGAGAnIL~rfAl~~p~------~V~GLiLvn~~~~~~gw~Ew~~ 144 (283)
T PF03096_consen 84 QLAEMLPEVLDH-------------FGLKSVIGFGVGAGANILARFALKHPE------RVLGLILVNPTCTAAGWMEWFY 144 (283)
T ss_dssp HHHCTHHHHHHH-------------HT---EEEEEETHHHHHHHHHHHHSGG------GEEEEEEES---S---HHHHHH
T ss_pred HHHHHHHHHHHh-------------CCccEEEEEeeccchhhhhhccccCcc------ceeEEEEEecCCCCccHHHHHH
Confidence 555555555554 445789999999999999999999865 6999999998653221100
Q ss_pred ----CCC-CCCCccccc------------------------------------chhhhhhhCCCCCCCCCCccCCCCCCc
Q 043192 200 ----GEP-YVPEYWTTI------------------------------------IDEPWQIARPDTSGLDDPIINPVADPK 238 (316)
Q Consensus 200 ----~~~-~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
... ......... ...++..|... ..+.. .
T Consensus 145 ~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R---------~DL~~-~ 214 (283)
T PF03096_consen 145 QKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSR---------TDLSI-E 214 (283)
T ss_dssp HHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT--------------S-E
T ss_pred HHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc---------ccchh-h
Confidence 000 000000000 00111111110 00111 4
Q ss_pred ccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 239 LSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 239 ~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
...+.| |+|++.|+.-+..+...++..+|... +.+++.++++|=... .++..++.+.+.=||+..|
T Consensus 215 ~~~~~c-~vLlvvG~~Sp~~~~vv~~ns~Ldp~----~ttllkv~dcGglV~-----eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 215 RPSLGC-PVLLVVGDNSPHVDDVVEMNSKLDPT----KTTLLKVADCGGLVL-----EEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp CTTCCS--EEEEEETTSTTHHHHHHHHHHS-CC----CEEEEEETT-TT-HH-----HH-HHHHHHHHHHHHHHTT
T ss_pred cCCCCC-CeEEEEecCCcchhhHHHHHhhcCcc----cceEEEecccCCccc-----ccCcHHHHHHHHHHHccCC
Confidence 455567 99999999999999999898888643 789999999866333 3666888888888988766
No 166
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.77 E-value=0.00031 Score=64.51 Aligned_cols=121 Identities=19% Similarity=0.203 Sum_probs=72.9
Q ss_pred EEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCC--------------CC
Q 043192 53 SARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDP--------------VP 118 (316)
Q Consensus 53 ~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------------~~ 118 (316)
.-+.|.=...- +...|++|++-|-+ ...... ....++..++.+.|..++.+++|-.+++. ..
T Consensus 15 ~qRY~~n~~~~-~~~gpifl~~ggE~--~~~~~~-~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~ 90 (434)
T PF05577_consen 15 SQRYWVNDQYY-KPGGPIFLYIGGEG--PIEPFW-INNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSE 90 (434)
T ss_dssp EEEEEEE-TT---TTSEEEEEE--SS---HHHHH-HH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHH
T ss_pred EEEEEEEhhhc-CCCCCEEEEECCCC--ccchhh-hcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHH
Confidence 34444444332 12368888884422 111111 22347788999999999999999765431 23
Q ss_pred cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 119 AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 119 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
+.+.|+...+++++.... ..+..+++++|-|.||++|.++-.++|. .+.|.++.|+.+.
T Consensus 91 QALaD~a~F~~~~~~~~~----------~~~~~pwI~~GgSY~G~Laaw~r~kyP~------~~~ga~ASSapv~ 149 (434)
T PF05577_consen 91 QALADLAYFIRYVKKKYN----------TAPNSPWIVFGGSYGGALAAWFRLKYPH------LFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHHHTT----------TGCC--EEEEEETHHHHHHHHHHHH-TT------T-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHHHhhc----------CCCCCCEEEECCcchhHHHHHHHhhCCC------eeEEEEeccceee
Confidence 346788888888886532 1344689999999999999999999955 6889998887543
No 167
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.77 E-value=0.00058 Score=62.95 Aligned_cols=48 Identities=19% Similarity=0.134 Sum_probs=36.0
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccc----cCCccceeEEecccccCC
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKL----EGINIDGICLLFPYFWGS 195 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~----~~~~~~~~i~~~p~~~~~ 195 (316)
....+++|+|+|+||+.+..+|.+.-+... ....++|+++-.|+++..
T Consensus 168 ~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 168 LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 445899999999999999999887532110 135789999988877654
No 168
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.69 E-value=0.00014 Score=66.14 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHhcCcEEEeecCCCCCCCC-----CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHH
Q 043192 88 TYHAYMNTLVSHAKIIAVSVDYRRAPEDP-----VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGG 162 (316)
Q Consensus 88 ~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 162 (316)
.|..++..|. +.||.+ ..|.++.+-.. ....++++...++.+.+. .+..++.|+||||||
T Consensus 109 ~~~~li~~L~-~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~-------------~g~~kV~LVGHSMGG 173 (440)
T PLN02733 109 YFHDMIEQLI-KWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKA-------------SGGKKVNIISHSMGG 173 (440)
T ss_pred HHHHHHHHHH-HcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHH-------------cCCCCEEEEEECHhH
Confidence 4556666664 468854 55655544211 122244555555555443 234789999999999
Q ss_pred HHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 163 NIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 163 ~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
.+++.++...++.. ...++.+|.+++.+.+.
T Consensus 174 lva~~fl~~~p~~~--~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 174 LLVKCFMSLHSDVF--EKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHCCHhH--HhHhccEEEECCCCCCC
Confidence 99999988765421 23588888888766554
No 169
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.63 E-value=0.0052 Score=51.77 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=129.8
Q ss_pred CceEEEEEecCCCCCCCCccEEEEEcCCcccccCcc-hhhhHHHHHHHHHhcCcEEEeecCCCCCC--CCCCc-----ch
Q 043192 50 HNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAF-SLTYHAYMNTLVSHAKIIAVSVDYRRAPE--DPVPA-----AH 121 (316)
Q Consensus 50 ~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~-~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~~~~~-----~~ 121 (316)
+.+++.++--. ++++|++|=.|.=|-..-+.. .....+-++.+..+ +.+.-+|-++... ..+|. .+
T Consensus 32 G~v~V~V~Gd~----~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p~~y~yPsm 105 (326)
T KOG2931|consen 32 GVVHVTVYGDP----KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFPEGYPYPSM 105 (326)
T ss_pred ccEEEEEecCC----CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCCCCCCCCCH
Confidence 35666666432 236788999998553322210 01112334556554 7788787765421 11221 25
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCCCCC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPIPGE 201 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 201 (316)
+++.+.+-.+.+. +..+.|+-+|--+|+++-..+|..+++ ++-|+|++++...........
T Consensus 106 d~LAd~l~~VL~~-------------f~lk~vIg~GvGAGAyIL~rFAl~hp~------rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 106 DDLADMLPEVLDH-------------FGLKSVIGMGVGAGAYILARFALNHPE------RVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred HHHHHHHHHHHHh-------------cCcceEEEecccccHHHHHHHHhcChh------heeEEEEEecCCCCchHHHHH
Confidence 6677666666665 556889999999999999999999855 699999998754322110000
Q ss_pred --------CCCCCccc------------------------------------ccchhhhhhhCCCCCCCCCCccCCCCCC
Q 043192 202 --------PYVPEYWT------------------------------------TIIDEPWQIARPDTSGLDDPIINPVADP 237 (316)
Q Consensus 202 --------~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
........ .....++..|... .|-.+. ...
T Consensus 167 ~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R----~DL~~~--r~~ 240 (326)
T KOG2931|consen 167 YNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGR----RDLSIE--RPK 240 (326)
T ss_pred HHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCC----CCcccc--CCC
Confidence 00000000 0111111211111 111000 000
Q ss_pred cccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 238 KLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
....++| |+|++.|+.-+.++...++..+|... ..+++.+.+++-...... ..++.+.+.=||+..|
T Consensus 241 ~~~tlkc-~vllvvGd~Sp~~~~vv~~n~~Ldp~----~ttllk~~d~g~l~~e~q-----P~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 241 LGTTLKC-PVLLVVGDNSPHVSAVVECNSKLDPT----YTTLLKMADCGGLVQEEQ-----PGKLAEAFKYFLQGMG 307 (326)
T ss_pred cCccccc-cEEEEecCCCchhhhhhhhhcccCcc----cceEEEEcccCCcccccC-----chHHHHHHHHHHccCC
Confidence 1115668 99999999999998888888888643 678888888876444323 3677777888887765
No 170
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.61 E-value=0.00072 Score=56.83 Aligned_cols=59 Identities=22% Similarity=0.301 Sum_probs=49.7
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHH
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFI 310 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl 310 (316)
|-|.++++.|.+++ +.+++++..++.|. +++...+++..|.-... ...+++++.+.+|+
T Consensus 180 p~lylYS~~D~l~~~~~ve~~~~~~~~~G~--~V~~~~f~~S~HV~H~r----~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 180 PRLYLYSKADPLIPWRDVEEHAEEARRKGW--DVRAEKFEDSPHVAHLR----KHPDRYWRAVDEFW 240 (240)
T ss_pred CeEEecCCCCcCcCHHHHHHHHHHHHHcCC--eEEEecCCCCchhhhcc----cCHHHHHHHHHhhC
Confidence 89999999999885 56889999999998 89999999999976632 44578888888774
No 171
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.53 E-value=0.00069 Score=58.67 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=69.9
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcE--EEeecCCCCCC--------CCCCcchhhHHHHHHHHHHhc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKII--AVSVDYRRAPE--------DPVPAAHEDSWTALKWVASHA 135 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~--v~~~d~r~~~~--------~~~~~~~~d~~~~~~~l~~~~ 135 (316)
..+-++||+||-.....+ ..+. ..+++...|+. .+.+.++-.+. .+-.....+++..+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~d----av~R-~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED----AVYR-TAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhH----HHHH-HHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 456899999994332211 2222 24555555643 34444442211 122333567888899998874
Q ss_pred CCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccc--cCCccceeEEecccccC
Q 043192 136 NGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKL--EGINIDGICLLFPYFWG 194 (316)
Q Consensus 136 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~ 194 (316)
...+|.|+.||||..+++..+.+...+.. -+.+++-+|+-+|=.+.
T Consensus 189 -------------~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 -------------PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred -------------CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 34799999999999999999887654321 14578888888886543
No 172
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.0011 Score=52.96 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=66.4
Q ss_pred CCccEEEEEcCCcccccCc-----------chhhhHHHHHHHHHhcCcEEEeecCCC---------CCCCCCCcchhhHH
Q 043192 66 QKLPLVVYFHGGAFIFENA-----------FSLTYHAYMNTLVSHAKIIAVSVDYRR---------APEDPVPAAHEDSW 125 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~-----------~~~~~~~~~~~l~~~~g~~v~~~d~r~---------~~~~~~~~~~~d~~ 125 (316)
.+..++|+|||.|...... ++-.--+++.+. .+.||-|++.+-.. .|.......++.+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA-v~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA-VAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH-HHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 4567999999988754221 000001344444 34488877776331 12223345566666
Q ss_pred HHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe
Q 043192 126 TALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL 188 (316)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~ 188 (316)
-++..+... .....|+++.||.||...+.+..++++. .++-++.+.
T Consensus 178 yvw~~~v~p-------------a~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aialT 223 (297)
T KOG3967|consen 178 YVWKNIVLP-------------AKAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIALT 223 (297)
T ss_pred HHHHHHhcc-------------cCcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEee
Confidence 666666543 5568999999999999999999998774 356666553
No 173
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.48 E-value=0.001 Score=55.92 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=62.4
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-CCCcchhh-HHHHHHHHHHhcCCCCCcccccc
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-PVPAAHED-SWTALKWVASHANGRGPEDWLKT 146 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d-~~~~~~~l~~~~~~~~~~~~~~~ 146 (316)
|.|.++|+++ |... .|..+...+.. -..++..++++.... .-...++| +...+..+++.
T Consensus 1 ~pLF~fhp~~---G~~~--~~~~L~~~l~~--~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~------------ 61 (257)
T COG3319 1 PPLFCFHPAG---GSVL--AYAPLAAALGP--LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV------------ 61 (257)
T ss_pred CCEEEEcCCC---CcHH--HHHHHHHHhcc--CceeeccccCcccccccccCCHHHHHHHHHHHHHHh------------
Confidence 5689999965 3322 23344444433 277888888865321 11222333 33334444443
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
-....+.|.|+|+||++|..+|.+.... ...+..++++.+...
T Consensus 62 -QP~GPy~L~G~S~GG~vA~evA~qL~~~---G~~Va~L~llD~~~~ 104 (257)
T COG3319 62 -QPEGPYVLLGWSLGGAVAFEVAAQLEAQ---GEEVAFLGLLDAVPP 104 (257)
T ss_pred -CCCCCEEEEeeccccHHHHHHHHHHHhC---CCeEEEEEEeccCCC
Confidence 2335899999999999999999886554 346777877776654
No 174
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.47 E-value=0.00062 Score=56.26 Aligned_cols=25 Identities=28% Similarity=0.219 Sum_probs=20.1
Q ss_pred CccEEEEeechHHHHHHHHHHHhhc
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
..+|.++||||||.++-.+......
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred cccceEEEecccHHHHHHHHHHhhh
Confidence 4689999999999999877665443
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.44 E-value=0.00099 Score=58.37 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHhcCcEEEeecCCCC--CCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHH
Q 043192 88 TYHAYMNTLVSHAKIIAVSVDYRRA--PEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIA 165 (316)
Q Consensus 88 ~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 165 (316)
..+.-+...++++|+.|+.+|--.. .+.+-.....|+...+++-..+ -...++.|+|.|+|+-+-
T Consensus 274 ~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~-------------w~~~~~~liGySfGADvl 340 (456)
T COG3946 274 DLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR-------------WGAKRVLLIGYSFGADVL 340 (456)
T ss_pred hhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh-------------hCcceEEEEeecccchhh
Confidence 3445556666778999999983211 1223345567888888887765 345799999999999876
Q ss_pred HHHHHHhh
Q 043192 166 HHMGIRQG 173 (316)
Q Consensus 166 ~~~a~~~~ 173 (316)
-..-.+.+
T Consensus 341 P~~~n~L~ 348 (456)
T COG3946 341 PFAYNRLP 348 (456)
T ss_pred HHHHHhCC
Confidence 66554443
No 176
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.35 E-value=0.014 Score=52.68 Aligned_cols=107 Identities=21% Similarity=0.127 Sum_probs=68.5
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEee-cCCCCCCCCCCcchhhHHHH-HHHHHHhcCCCCCcccc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSV-DYRRAPEDPVPAAHEDSWTA-LKWVASHANGRGPEDWL 144 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~-d~r~~~~~~~~~~~~d~~~~-~~~l~~~~~~~~~~~~~ 144 (316)
+.|+.||+-|- +. +....-+ .+..+.|...+.+ |.|+.+++ |-...++.+.. ++-+++....+|
T Consensus 288 KPPL~VYFSGy---R~-aEGFEgy----~MMk~Lg~PfLL~~DpRleGGa-FYlGs~eyE~~I~~~I~~~L~~Lg----- 353 (511)
T TIGR03712 288 KPPLNVYFSGY---RP-AEGFEGY----FMMKRLGAPFLLIGDPRLEGGA-FYLGSDEYEQGIINVIQEKLDYLG----- 353 (511)
T ss_pred CCCeEEeeccC---cc-cCcchhH----HHHHhcCCCeEEeeccccccce-eeeCcHHHHHHHHHHHHHHHHHhC-----
Confidence 56888888772 22 2211222 3456668776655 66665443 33333333332 233344444454
Q ss_pred cccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCCCC
Q 043192 145 KTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSAPI 198 (316)
Q Consensus 145 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 198 (316)
++.+.++|.|-|||-.-|+.+++.. .+.++|+--|.++.....
T Consensus 354 ---F~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLGtiA 396 (511)
T TIGR03712 354 ---FDHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLGTIA 396 (511)
T ss_pred ---CCHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchhhhh
Confidence 9999999999999999999999864 689999988988765443
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.34 E-value=0.0065 Score=52.16 Aligned_cols=62 Identities=13% Similarity=0.094 Sum_probs=47.2
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|+|++||..|..++ .+..++...... +.+.+.+++++|..... ......+.++++.+|+.++
T Consensus 234 P~l~~~G~~D~~vp~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 234 PVLLVHGERDEVVPLRDAEDLYEAARER----PKKLLFVPGGGHIDLYD--NPPAVEQALDKLAEFLERH 297 (299)
T ss_pred ceEEEecCCCcccchhhhHHHHhhhccC----CceEEEecCCccccccC--ccHHHHHHHHHHHHHHHHh
Confidence 99999999998884 666666666643 35788888999976642 3355568999999999875
No 178
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.31 E-value=0.0028 Score=54.43 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=68.4
Q ss_pred CCccEEEEEcCCccc--ccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC---CCCcch-hhHHHHHHHHHHhcCCCC
Q 043192 66 QKLPLVVYFHGGAFI--FENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED---PVPAAH-EDSWTALKWVASHANGRG 139 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~--~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~---~~~~~~-~d~~~~~~~l~~~~~~~~ 139 (316)
..+..||.+-|.+.. .|... .= .+.||.|+..++++..++ +++..- .-+..++.|.....
T Consensus 241 ngq~LvIC~EGNAGFYEvG~m~---------tP-~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L---- 306 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVGVMN---------TP-AQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL---- 306 (517)
T ss_pred CCceEEEEecCCccceEeeeec---------Ch-HHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc----
Confidence 346788888883321 22222 11 345999999998865443 344332 23344556666654
Q ss_pred CcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 140 PEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 140 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
++.++.|+|.|+|-||+-++++|..+++ ++++|+-+.+-|
T Consensus 307 -------gf~~edIilygWSIGGF~~~waAs~YPd-------VkavvLDAtFDD 346 (517)
T KOG1553|consen 307 -------GFRQEDIILYGWSIGGFPVAWAASNYPD-------VKAVVLDATFDD 346 (517)
T ss_pred -------CCCccceEEEEeecCCchHHHHhhcCCC-------ceEEEeecchhh
Confidence 4888999999999999999999999876 899998776543
No 179
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.013 Score=48.27 Aligned_cols=107 Identities=15% Similarity=0.213 Sum_probs=68.2
Q ss_pred CCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC--cEEEeecC---CCCC-------CC---CCCcchhhHHHHHH
Q 043192 65 NQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK--IIAVSVDY---RRAP-------ED---PVPAAHEDSWTALK 129 (316)
Q Consensus 65 ~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g--~~v~~~d~---r~~~-------~~---~~~~~~~d~~~~~~ 129 (316)
..+++.+++|-|.. |... .|..+...+....+ ..+..+.. -+-| ++ ..-...+++..-+.
T Consensus 26 ~~~~~li~~IpGNP---G~~g--FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKla 100 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNP---GLLG--FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLA 100 (301)
T ss_pred CCCceEEEEecCCC---Cchh--HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHH
Confidence 35778999999844 4433 46677777777655 23333322 2212 11 11222356777888
Q ss_pred HHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 130 WVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
++++..++ ..|++++|||-|+.+.+.++..... ...+..++++-|.+
T Consensus 101 Fik~~~Pk------------~~ki~iiGHSiGaYm~Lqil~~~k~----~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 101 FIKEYVPK------------DRKIYIIGHSIGAYMVLQILPSIKL----VFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHhCCC------------CCEEEEEecchhHHHHHHHhhhccc----ccceEEEEEecchH
Confidence 99988643 3799999999999999999875332 23566666666644
No 180
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.24 E-value=0.07 Score=48.81 Aligned_cols=66 Identities=23% Similarity=0.153 Sum_probs=44.5
Q ss_pred hcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhc
Q 043192 99 HAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 99 ~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
+.|..|..+.+.-.|. -.+.+.|+..+.....+..... +-+..|.+|+|.+.||..++.+|+.+++
T Consensus 98 ~~GHPvYFV~F~p~P~--pgQTl~DV~~ae~~Fv~~V~~~--------hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 98 RAGHPVYFVGFFPEPE--PGQTLEDVMRAEAAFVEEVAER--------HPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HcCCCeEEEEecCCCC--CCCcHHHHHHHHHHHHHHHHHh--------CCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 3387777776554443 2456778777655443333222 2444599999999999999999999865
No 181
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.19 E-value=0.006 Score=55.59 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=71.0
Q ss_pred eEEecC--CCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcC-------------------
Q 043192 43 DIIYSS--EHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAK------------------- 101 (316)
Q Consensus 43 ~v~~~~--~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g------------------- 101 (316)
.+.+.. +..+....|..++ .....|+|+|+.||.. +++ . .-++.+.|
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG---~SS---~----~g~f~e~GP~~~~~~~~~~l~~n~~sW 82 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPG---CSS---M----WGLFGENGPFRINPDGPYTLEDNPYSW 82 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTT---B-T---H----HHHHCTTSSEEEETTSTSEEEE-TT-G
T ss_pred EEecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCce---ecc---c----cccccccCceEEeeccccccccccccc
Confidence 345553 2244444444443 2467899999999873 332 1 12233334
Q ss_pred ---cEEEeecCCCCCCCCC--------CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHH
Q 043192 102 ---IIAVSVDYRRAPEDPV--------PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 102 ---~~v~~~d~r~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 170 (316)
..++-+|.+.+.+.++ ...-+++.+...+|+.-..++. .....+++|+|.|+||..+-.+|.
T Consensus 83 ~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 83 NKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFP-------EYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp GGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSG-------GGTTSEEEEEEETTHHHHHHHHHH
T ss_pred ccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhh-------hccCCCEEEEccccccccchhhHH
Confidence 3344445443322221 1123344455555554433332 355679999999999999988887
Q ss_pred Hhhcccc----cCCccceeEEecccccC
Q 043192 171 RQGQEKL----EGINIDGICLLFPYFWG 194 (316)
Q Consensus 171 ~~~~~~~----~~~~~~~~i~~~p~~~~ 194 (316)
+.-+... ....++|+++-+|+++.
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhhccccccccccccccceecCccccc
Confidence 6544331 25689999999887553
No 182
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.15 E-value=0.002 Score=67.43 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=61.9
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-CCCcchhhHHHHH-HHHHHhcCCCCCccccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-PVPAAHEDSWTAL-KWVASHANGRGPEDWLK 145 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~~ 145 (316)
.|.++++||++. +.. .|..+...+ .. ++.|+.++.++.... .....++++.+.+ ..+.+.
T Consensus 1068 ~~~l~~lh~~~g---~~~--~~~~l~~~l-~~-~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~----------- 1129 (1296)
T PRK10252 1068 GPTLFCFHPASG---FAW--QFSVLSRYL-DP-QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ----------- 1129 (1296)
T ss_pred CCCeEEecCCCC---chH--HHHHHHHhc-CC-CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh-----------
Confidence 366899999663 322 455665555 33 688889988765432 1122333333322 222221
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
....++.++||||||.+|..+|.+.... +..+..++++.++
T Consensus 1130 --~~~~p~~l~G~S~Gg~vA~e~A~~l~~~---~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1130 --QPHGPYHLLGYSLGGTLAQGIAARLRAR---GEEVAFLGLLDTW 1170 (1296)
T ss_pred --CCCCCEEEEEechhhHHHHHHHHHHHHc---CCceeEEEEecCC
Confidence 1125799999999999999999876443 3467888877654
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.11 E-value=0.0018 Score=61.25 Aligned_cols=51 Identities=25% Similarity=0.189 Sum_probs=34.5
Q ss_pred CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 118 PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 118 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
..+.+-+.+|++++.+...+-.... .--|..|+|+||||||.+|..++..-
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~----~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYA----SPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccC----CCCCceEEEEeccchhHHHHHHHhhh
Confidence 3445667788888877654310000 12377899999999999999888753
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.04 E-value=0.0018 Score=58.50 Aligned_cols=91 Identities=20% Similarity=0.157 Sum_probs=59.3
Q ss_pred hHHHHHHHHHhcCcE------EEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHH
Q 043192 89 YHAYMNTLVSHAKII------AVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGG 162 (316)
Q Consensus 89 ~~~~~~~l~~~~g~~------v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 162 (316)
|..++..|. +.||. .+-.|+|.++. ........+...++.+.+. +..+|.|+||||||
T Consensus 67 ~~~li~~L~-~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~--------------~~~kv~li~HSmGg 130 (389)
T PF02450_consen 67 FAKLIENLE-KLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKK--------------NGKKVVLIAHSMGG 130 (389)
T ss_pred HHHHHHHHH-hcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHh--------------cCCcEEEEEeCCCc
Confidence 567777775 45755 22379998875 2233344455555544432 24799999999999
Q ss_pred HHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 163 NIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 163 ~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
.++..++.......-....|+++|.+++.+.+.
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 999999887644210023699999988765443
No 185
>PLN02209 serine carboxypeptidase
Probab=96.97 E-value=0.015 Score=53.24 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhccc----ccCCccceeEEecccccC
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEK----LEGINIDGICLLFPYFWG 194 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~ 194 (316)
+++.+.+.+|+.-..++. ....++++|+|.|.||+.+-.+|.+..+.. -....++|+++-.|+++.
T Consensus 145 ~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHP-------QFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHHHhCc-------cccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 345555565555433332 344568999999999998888887653321 124578999998887654
No 186
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.81 E-value=0.022 Score=52.08 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=35.2
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhccc----ccCCccceeEEecccccCC
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEK----LEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 195 (316)
...++++|.|.|.||+.+-.+|.+..+.. ..+..++|+++-.|+++..
T Consensus 162 ~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 162 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred hcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 34578999999999998888887653321 1245789999988876543
No 187
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.78 E-value=0.0044 Score=54.76 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=60.4
Q ss_pred EEEEEcCCcccccCcchhhhHHHHHHHHHhcCcE---EEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccc
Q 043192 70 LVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKII---AVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKT 146 (316)
Q Consensus 70 ~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 146 (316)
.++++||.+...+. +...... ....|+. +..+++... ...............++.+-...
T Consensus 61 pivlVhG~~~~~~~-----~~~~~~~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~--------- 123 (336)
T COG1075 61 PIVLVHGLGGGYGN-----FLPLDYR-LAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAK--------- 123 (336)
T ss_pred eEEEEccCcCCcch-----hhhhhhh-hcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhh---------
Confidence 58999996543333 2232222 4444666 666666643 11122233344444455544332
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
....++.|.||||||..+..++...+.. ..++.++.+++.-
T Consensus 124 -~ga~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~tp~ 164 (336)
T COG1075 124 -TGAKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGTPH 164 (336)
T ss_pred -cCCCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEeccCC
Confidence 3348999999999999999888776532 3588888777643
No 188
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.72 E-value=0.0035 Score=51.82 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEec
Q 043192 124 SWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLF 189 (316)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~ 189 (316)
...|++|+.+..... +.+|.+.|||.||++|...+....... ..+|..+....
T Consensus 68 q~~A~~yl~~~~~~~-----------~~~i~v~GHSkGGnLA~yaa~~~~~~~--~~rI~~vy~fD 120 (224)
T PF11187_consen 68 QKSALAYLKKIAKKY-----------PGKIYVTGHSKGGNLAQYAAANCDDEI--QDRISKVYSFD 120 (224)
T ss_pred HHHHHHHHHHHHHhC-----------CCCEEEEEechhhHHHHHHHHHccHHH--hhheeEEEEee
Confidence 356777777765433 246999999999999999998854322 23577776544
No 189
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.56 E-value=0.0083 Score=48.57 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=43.9
Q ss_pred cEEEeecCCCCCC------------CCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHH
Q 043192 102 IIAVSVDYRRAPE------------DPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMG 169 (316)
Q Consensus 102 ~~v~~~d~r~~~~------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 169 (316)
..|++|-||=..- ..+.....|+.+++++-.++. =+.+.++|+|||.|+.+...++
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~------------n~GRPfILaGHSQGs~~l~~LL 113 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY------------NNGRPFILAGHSQGSMHLLRLL 113 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc------------CCCCCEEEEEeChHHHHHHHHH
Confidence 6688998882211 113344689999999887763 2336899999999999999998
Q ss_pred HHh
Q 043192 170 IRQ 172 (316)
Q Consensus 170 ~~~ 172 (316)
.+.
T Consensus 114 ~e~ 116 (207)
T PF11288_consen 114 KEE 116 (207)
T ss_pred HHH
Confidence 875
No 190
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.49 E-value=0.013 Score=45.48 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=28.7
Q ss_pred CCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
...+|.+.|||+||.+|..++....... ......++.+.+.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p 66 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPP 66 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCC
Confidence 4579999999999999999998875421 1124445555543
No 191
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.30 E-value=0.021 Score=43.39 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=22.8
Q ss_pred CccEEEEeechHHHHHHHHHHHhhcc
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQE 175 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~~ 175 (316)
..+|.+.|||+||.+|..++......
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~ 88 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASH 88 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHC
T ss_pred CccchhhccchHHHHHHHHHHhhhhc
Confidence 37899999999999999999987654
No 192
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.11 E-value=0.012 Score=51.99 Aligned_cols=91 Identities=21% Similarity=0.211 Sum_probs=66.9
Q ss_pred HHHHHHHHhcCcEEEeecCCCCCCC-----------------CCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccE
Q 043192 91 AYMNTLVSHAKIIAVSVDYRRAPED-----------------PVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKV 153 (316)
Q Consensus 91 ~~~~~l~~~~g~~v~~~d~r~~~~~-----------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i 153 (316)
.++..++.+.+..++-+++|..++. +-.+.+.|....+.+|+... ......|
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~-----------~a~~~pv 169 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDL-----------SAEASPV 169 (492)
T ss_pred chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhcc-----------ccccCcE
Confidence 5778899999999999999965432 12345678888899998874 2455789
Q ss_pred EEEeechHHHHHHHHHHHhhcccccCCccceeE-EecccccCCCCC
Q 043192 154 ILSGDSAGGNIAHHMGIRQGQEKLEGINIDGIC-LLFPYFWGSAPI 198 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i-~~~p~~~~~~~~ 198 (316)
+++|-|.||++|.++=.++|. .+.|++ ..+|.+...+..
T Consensus 170 IafGGSYGGMLaAWfRlKYPH------iv~GAlAaSAPvl~f~d~v 209 (492)
T KOG2183|consen 170 IAFGGSYGGMLAAWFRLKYPH------IVLGALAASAPVLYFEDTV 209 (492)
T ss_pred EEecCchhhHHHHHHHhcChh------hhhhhhhccCceEeecCCC
Confidence 999999999999999888854 344444 555765544443
No 193
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.08 E-value=0.12 Score=47.14 Aligned_cols=50 Identities=12% Similarity=0.061 Sum_probs=37.4
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhccc----ccCCccceeEEecccccCCC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEK----LEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 196 (316)
+...+.++|.|.|.+|+..-.+|.+.-+.. -+...++|+++=.|.++...
T Consensus 164 ey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 164 EYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred hhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 455689999999999998888887654322 13568999999888776543
No 194
>PLN02606 palmitoyl-protein thioesterase
Probab=96.06 E-value=0.076 Score=45.54 Aligned_cols=109 Identities=14% Similarity=0.032 Sum_probs=62.1
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHH-hcCcEEEeecCCCCCCCCC-CcchhhHHHHHHHHHHhcCCCCCccc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVS-HAKIIAVSVDYRRAPEDPV-PAAHEDSWTALKWVASHANGRGPEDW 143 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~-~~g~~v~~~d~r~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~ 143 (316)
.+.| ||+.||=|=. .+.. +...+...+ . ..|..+.++..-.....++ -...+++..+.+.+++. +.+
T Consensus 25 ~~~P-vViwHGlgD~-~~~~--~~~~~~~~i-~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~~-~~L----- 93 (306)
T PLN02606 25 LSVP-FVLFHGFGGE-CSNG--KVSNLTQFL-INHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQM-KEL----- 93 (306)
T ss_pred CCCC-EEEECCCCcc-cCCc--hHHHHHHHH-HhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhcc-hhh-----
Confidence 3556 6778994311 1111 344444433 4 2355444443111111233 33445666666666652 222
Q ss_pred ccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 144 LKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 144 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
.+-+.++|+|.||.++-.++.++++. +.++-+|.+++.-.+.
T Consensus 94 ------~~G~naIGfSQGglflRa~ierc~~~----p~V~nlISlggph~Gv 135 (306)
T PLN02606 94 ------SEGYNIVAESQGNLVARGLIEFCDNA----PPVINYVSLGGPHAGV 135 (306)
T ss_pred ------cCceEEEEEcchhHHHHHHHHHCCCC----CCcceEEEecCCcCCc
Confidence 24699999999999999999998652 3588888877644333
No 195
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.90 E-value=0.023 Score=52.88 Aligned_cols=92 Identities=12% Similarity=0.069 Sum_probs=55.2
Q ss_pred hHHHHHHHHHhcCcE-----EEeecCCCCCCCC--CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechH
Q 043192 89 YHAYMNTLVSHAKII-----AVSVDYRRAPEDP--VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAG 161 (316)
Q Consensus 89 ~~~~~~~l~~~~g~~-----v~~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 161 (316)
|..++..|+. .||. .+..|+|+++... ....+..+...++.+.+. -+.++|+|+|||||
T Consensus 158 w~kLIe~L~~-iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~-------------nggkKVVLV~HSMG 223 (642)
T PLN02517 158 WAVLIANLAR-IGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT-------------NGGKKVVVVPHSMG 223 (642)
T ss_pred HHHHHHHHHH-cCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH-------------cCCCeEEEEEeCCc
Confidence 3466666654 4764 5566788774322 133344555555555433 11379999999999
Q ss_pred HHHHHHHHHHhhc---------ccccCCccceeEEecccccC
Q 043192 162 GNIAHHMGIRQGQ---------EKLEGINIDGICLLFPYFWG 194 (316)
Q Consensus 162 G~~a~~~a~~~~~---------~~~~~~~~~~~i~~~p~~~~ 194 (316)
|.+++.++..... ..-...-|++.|.++|.+.+
T Consensus 224 glv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 224 VLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9999998764210 00012357888888876544
No 196
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.89 E-value=0.047 Score=43.58 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=29.6
Q ss_pred CCCccEEEEeechHHHHHHHHHHH--hhcccccCCccceeEEecc
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIR--QGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~--~~~~~~~~~~~~~~i~~~p 190 (316)
....+|+|+|+|.|+.++..++.. .+.. ...+|.+++++.-
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~--~~~~I~avvlfGd 120 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPD--VADRIAAVVLFGD 120 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHH--HHHHEEEEEEES-
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChh--hhhhEEEEEEecC
Confidence 334699999999999999999877 1111 1346888888763
No 197
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.83 E-value=0.12 Score=44.42 Aligned_cols=107 Identities=13% Similarity=0.023 Sum_probs=61.5
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCc-chhhHHHHHHHHHHhcCCCCCccccc
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPA-AHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
+.| +|+.||=|= +....+...+...+..--|..+.++..-.+...+|-. ..+++..+.+.+++. +.+
T Consensus 25 ~~P-~ViwHG~GD---~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~-~~l------- 92 (314)
T PLN02633 25 SVP-FIMLHGIGT---QCSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQM-KEL------- 92 (314)
T ss_pred CCC-eEEecCCCc---ccCCchHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhc-hhh-------
Confidence 556 566798441 1111244454444423236666655432222333332 234555555555552 222
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
.+-+.++|+|.||.++-.++.++++. +.++-+|.+++.-.
T Consensus 93 ----~~G~naIGfSQGGlflRa~ierc~~~----p~V~nlISlggph~ 132 (314)
T PLN02633 93 ----SQGYNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLAGPHA 132 (314)
T ss_pred ----hCcEEEEEEccchHHHHHHHHHCCCC----CCcceEEEecCCCC
Confidence 24699999999999999999998651 35888887775443
No 198
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.81 E-value=0.12 Score=43.23 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=62.8
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcc-hhhHHHHHHHHHHhcCCCCCcccccc
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAA-HEDSWTALKWVASHANGRGPEDWLKT 146 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~ 146 (316)
.| +|++||=| .+..+.....+.+.+-..-|..|.+.+.--+-..++-.. .+.+..+.+.++.. +.+
T Consensus 24 ~P-~ii~HGig---d~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m-~~l-------- 90 (296)
T KOG2541|consen 24 VP-VIVWHGIG---DSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQM-PEL-------- 90 (296)
T ss_pred CC-EEEEeccC---cccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcc-hhc--------
Confidence 56 57789943 222222355666666566688888887543322333333 34444455555532 222
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
++-+.++|.|.||.++-.++....+ +.++..|.+++
T Consensus 91 ---sqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~g 126 (296)
T KOG2541|consen 91 ---SQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGG 126 (296)
T ss_pred ---cCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccC
Confidence 4679999999999999999888765 34777776554
No 199
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.81 E-value=0.12 Score=41.73 Aligned_cols=85 Identities=22% Similarity=0.267 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHhcCcEEEeecCCCCCCC-CCCcchhhHHH-HHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHH
Q 043192 88 TYHAYMNTLVSHAKIIAVSVDYRRAPED-PVPAAHEDSWT-ALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIA 165 (316)
Q Consensus 88 ~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 165 (316)
.|..+...+.. .+.++.++.++.... .......+... ....+.+. ....++.++|||+||.++
T Consensus 14 ~~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 14 EYARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-------------AGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred HHHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------------cCCCCeEEEEECHHHHHH
Confidence 45566555543 477888887755322 22223333322 22233322 224679999999999999
Q ss_pred HHHHHHhhcccccCCccceeEEecc
Q 043192 166 HHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 166 ~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
..++.+.... ...+.+++++.+
T Consensus 79 ~~~a~~l~~~---~~~~~~l~~~~~ 100 (212)
T smart00824 79 HAVAARLEAR---GIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHhC---CCCCcEEEEEcc
Confidence 9998876543 235777776654
No 200
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.80 E-value=0.037 Score=39.73 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=42.3
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCCC
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKDY 315 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 315 (316)
|+|++.++.|+..+ .++++++.|. +.+++..++.+|+.... ... -+.+.+.+||.+-..
T Consensus 36 piL~l~~~~Dp~TP~~~a~~~~~~l~------~s~lvt~~g~gHg~~~~--~s~---C~~~~v~~yl~~G~l 96 (103)
T PF08386_consen 36 PILVLGGTHDPVTPYEGARAMAARLP------GSRLVTVDGAGHGVYAG--GSP---CVDKAVDDYLLDGTL 96 (103)
T ss_pred CEEEEecCcCCCCcHHHHHHHHHHCC------CceEEEEeccCcceecC--CCh---HHHHHHHHHHHcCCC
Confidence 99999999999885 5566666654 57999999999987732 122 334556788876444
No 201
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.70 E-value=0.036 Score=46.13 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=28.9
Q ss_pred CccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
..+|.+.|||+||.+|..++....... ....+.++..-+|.+
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 468999999999999999998765321 123455555545544
No 202
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.49 E-value=0.26 Score=45.11 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=47.3
Q ss_pred CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 118 PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 118 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
...-+|+....+.+.+..++++ -...+.+|+|.|.||+-+..+|....+.. ...++++.+++......
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~--------r~~~~~~L~GESYgg~yip~~A~~L~~~~---~~~~~~~nlssvligng 240 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYA--------RLLSPKFLAGESYGGHYIPVFAHELLEDN---IALNGNVNLSSVLIGNG 240 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHh--------hhcCceeEeeccccchhhHHHHHHHHHhc---cccCCceEeeeeeecCC
Confidence 3345788888888877766553 22268999999999999999998765431 23567777666654443
No 203
>PLN02454 triacylglycerol lipase
Probab=95.01 E-value=0.082 Score=47.45 Aligned_cols=44 Identities=14% Similarity=0.210 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcc
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQE 175 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~ 175 (316)
.+++...++-+.+..+. ..-+|.+.|||+||.+|...|......
T Consensus 209 r~qvl~~V~~l~~~Yp~-----------~~~sI~vTGHSLGGALAtLaA~di~~~ 252 (414)
T PLN02454 209 RSQLLAKIKELLERYKD-----------EKLSIVLTGHSLGASLATLAAFDIVEN 252 (414)
T ss_pred HHHHHHHHHHHHHhCCC-----------CCceEEEEecCHHHHHHHHHHHHHHHh
Confidence 34555666666554311 112599999999999999999876543
No 204
>PF03283 PAE: Pectinacetylesterase
Probab=94.85 E-value=0.042 Score=48.90 Aligned_cols=42 Identities=24% Similarity=0.107 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhh
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
..-+.+++++|.++. .-++++|+|.|.|+||..++..+-...
T Consensus 137 ~~i~~avl~~l~~~g-----------l~~a~~vlltG~SAGG~g~~~~~d~~~ 178 (361)
T PF03283_consen 137 YRILRAVLDDLLSNG-----------LPNAKQVLLTGCSAGGLGAILHADYVR 178 (361)
T ss_pred HHHHHHHHHHHHHhc-----------CcccceEEEeccChHHHHHHHHHHHHH
Confidence 466788899998872 256789999999999999998876543
No 205
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.72 E-value=0.16 Score=43.16 Aligned_cols=38 Identities=16% Similarity=-0.006 Sum_probs=28.2
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
+-+.++|+|.||.++-.++.++++ +.++-+|.+++.-.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecCccc
Confidence 579999999999999999999865 35888998776443
No 206
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.41 E-value=0.42 Score=43.64 Aligned_cols=117 Identities=13% Similarity=0.023 Sum_probs=73.6
Q ss_pred EEecCCCCCCCCccEEEEEcCCcccccCcchhhh-HHHHHHHHHhcCcEEEeecCCCCCCC--------------CCCcc
Q 043192 56 IYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTY-HAYMNTLVSHAKIIAVSVDYRRAPED--------------PVPAA 120 (316)
Q Consensus 56 ~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~-~~~~~~l~~~~g~~v~~~d~r~~~~~--------------~~~~~ 120 (316)
.|.+.... ....|+.|+|-|-|-. +..+... ......++.+.|..|+..++|..+.. +..+.
T Consensus 75 ~y~n~~~~-~~~gPiFLmIGGEgp~--~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QA 151 (514)
T KOG2182|consen 75 FYNNNQWA-KPGGPIFLMIGGEGPE--SDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQA 151 (514)
T ss_pred eeeccccc-cCCCceEEEEcCCCCC--CCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHH
Confidence 44444432 2345888888664422 2111111 12345778889999999999966532 11234
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
+.|+...++.+...- + .-+..+.+..|-|.-|.++.++=..+|+ .+.|.+..|..
T Consensus 152 LaDla~fI~~~n~k~---n-------~~~~~~WitFGgSYsGsLsAW~R~~yPe------l~~GsvASSap 206 (514)
T KOG2182|consen 152 LADLAEFIKAMNAKF---N-------FSDDSKWITFGGSYSGSLSAWFREKYPE------LTVGSVASSAP 206 (514)
T ss_pred HHHHHHHHHHHHhhc---C-------CCCCCCeEEECCCchhHHHHHHHHhCch------hheeecccccc
Confidence 566666666665442 1 2445699999999999999999888854 57777766653
No 207
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.40 E-value=0.3 Score=45.33 Aligned_cols=119 Identities=21% Similarity=0.184 Sum_probs=72.2
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC-----CCC---c---
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED-----PVP---A--- 119 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----~~~---~--- 119 (316)
.+...+|+|.+-+ + -++.+=|||| .|......-...+..- ...||++++-|--..... .+- .
T Consensus 16 ~i~fev~LP~~WN--g---R~~~~GgGG~-~G~i~~~~~~~~~~~~-~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~ 88 (474)
T PF07519_consen 16 NIRFEVWLPDNWN--G---RFLQVGGGGF-AGGINYADGKASMATA-LARGYATASTDSGHQGSAGSDDASFGNNPEALL 88 (474)
T ss_pred eEEEEEECChhhc--c---CeEEECCCee-eCcccccccccccchh-hhcCeEEEEecCCCCCCcccccccccCCHHHHH
Confidence 7888999999663 2 2566666665 4543311100002223 344999999984433221 111 0
Q ss_pred -----chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 120 -----AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 120 -----~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+.+...+-+.|.+.. +| -.+++-+..|.|.||.-++..|.++|+ .++|++.-+|.+
T Consensus 89 dfa~ra~h~~~~~aK~l~~~~--Yg--------~~p~~sY~~GcS~GGRqgl~~AQryP~------dfDGIlAgaPA~ 150 (474)
T PF07519_consen 89 DFAYRALHETTVVAKALIEAF--YG--------KAPKYSYFSGCSTGGRQGLMAAQRYPE------DFDGILAGAPAI 150 (474)
T ss_pred HHHhhHHHHHHHHHHHHHHHH--hC--------CCCCceEEEEeCCCcchHHHHHHhChh------hcCeEEeCCchH
Confidence 1122223333333321 22 567889999999999999999999976 499999999854
No 208
>PLN02408 phospholipase A1
Probab=93.72 E-value=0.21 Score=44.20 Aligned_cols=24 Identities=17% Similarity=0.248 Sum_probs=21.2
Q ss_pred ccEEEEeechHHHHHHHHHHHhhc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
.+|.+.|||+||.+|...|.....
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 469999999999999999987654
No 209
>PLN02571 triacylglycerol lipase
Probab=93.48 E-value=0.25 Score=44.49 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=20.4
Q ss_pred cEEEEeechHHHHHHHHHHHhhc
Q 043192 152 KVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 152 ~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
+|.+.|||+||.+|...|.....
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~ 249 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVA 249 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHH
Confidence 79999999999999999987643
No 210
>PLN00413 triacylglycerol lipase
Probab=93.01 E-value=0.19 Score=45.75 Aligned_cols=23 Identities=39% Similarity=0.430 Sum_probs=19.8
Q ss_pred CccEEEEeechHHHHHHHHHHHh
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
..++.+.|||+||.+|..++...
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHHH
Confidence 35899999999999999988643
No 211
>PLN02802 triacylglycerol lipase
Probab=92.73 E-value=0.34 Score=44.56 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=21.4
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQE 175 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~ 175 (316)
-+|.|.|||+||.+|...+......
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4799999999999999999876543
No 212
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=92.62 E-value=0.16 Score=41.49 Aligned_cols=49 Identities=20% Similarity=0.143 Sum_probs=33.6
Q ss_pred cccCCCCCcEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccc
Q 043192 238 KLSSLGCNRLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHL 291 (316)
Q Consensus 238 ~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~ 291 (316)
.+.++.+ |+|+++|++|.+++... ...+.+.-. +.++++++++||....
T Consensus 170 ~l~~i~~-p~l~i~~~~D~~~p~~~--~~~~~~~~~--~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 170 ALSNIKV-PTLIIWGEDDPLVPPES--SEQLAKLIP--NSQLVLIEGSGHFAFL 218 (230)
T ss_dssp HHTTTTS-EEEEEEETTCSSSHHHH--HHHHHHHST--TEEEEEETTCCSTHHH
T ss_pred cccccCC-CeEEEEeCCCCCCCHHH--HHHHHHhcC--CCEEEECCCCChHHHh
Confidence 3445666 99999999999885322 112333222 6899999999997664
No 213
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=92.42 E-value=0.31 Score=44.18 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=44.1
Q ss_pred hHHHHHHHHHhcCcE------EEeecCCCCCCCC--CCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeech
Q 043192 89 YHAYMNTLVSHAKII------AVSVDYRRAPEDP--VPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSA 160 (316)
Q Consensus 89 ~~~~~~~l~~~~g~~------v~~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 160 (316)
|..++..+ ...||. -+..|+|++...+ -...+.++..-++..-+. -..++|+|++|||
T Consensus 126 w~~~i~~l-v~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~-------------~G~kkVvlisHSM 191 (473)
T KOG2369|consen 126 WHELIENL-VGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKL-------------NGGKKVVLISHSM 191 (473)
T ss_pred HHHHHHHH-HhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHH-------------cCCCceEEEecCC
Confidence 44555554 445766 4567888864321 122233444444433332 1238999999999
Q ss_pred HHHHHHHHHHHhhc
Q 043192 161 GGNIAHHMGIRQGQ 174 (316)
Q Consensus 161 GG~~a~~~a~~~~~ 174 (316)
||.+.+++....+.
T Consensus 192 G~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 192 GGLYVLYFLKWVEA 205 (473)
T ss_pred ccHHHHHHHhcccc
Confidence 99999999887655
No 214
>PLN02324 triacylglycerol lipase
Probab=92.00 E-value=0.32 Score=43.72 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhh
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
+++...++-+.+..+. ..-+|.+.|||+||.+|...|....
T Consensus 197 eqVl~eV~~L~~~Yp~-----------e~~sItvTGHSLGGALAtLaA~dl~ 237 (415)
T PLN02324 197 EQVQGELKRLLELYKN-----------EEISITFTGHSLGAVMSVLSAADLV 237 (415)
T ss_pred HHHHHHHHHHHHHCCC-----------CCceEEEecCcHHHHHHHHHHHHHH
Confidence 4455666666654311 1247999999999999999997653
No 215
>PLN02934 triacylglycerol lipase
Probab=91.71 E-value=0.33 Score=44.67 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=19.5
Q ss_pred ccEEEEeechHHHHHHHHHHHh
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.++++.|||+||.+|..++...
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CeEEEeccccHHHHHHHHHHHH
Confidence 5899999999999999998653
No 216
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.66 E-value=0.63 Score=41.18 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccc
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKL 177 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 177 (316)
..+.+.++-|.+..+ .-+|.+.|||+||.+|...|......++
T Consensus 155 ~~~~~~~~~L~~~~~-------------~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP-------------NYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred HHHHHHHHHHHHhcC-------------CcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 456666667766643 3589999999999999999988766543
No 217
>PLN02162 triacylglycerol lipase
Probab=91.47 E-value=0.38 Score=43.82 Aligned_cols=22 Identities=36% Similarity=0.412 Sum_probs=19.1
Q ss_pred CccEEEEeechHHHHHHHHHHH
Q 043192 150 FQKVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~ 171 (316)
..++.+.|||+||.+|..++..
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred CceEEEEecChHHHHHHHHHHH
Confidence 3589999999999999988764
No 218
>PLN02719 triacylglycerol lipase
Probab=91.37 E-value=0.43 Score=43.95 Aligned_cols=24 Identities=21% Similarity=0.353 Sum_probs=21.1
Q ss_pred ccEEEEeechHHHHHHHHHHHhhc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
-+|.+.|||+||.+|...|.....
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHH
Confidence 489999999999999999987654
No 219
>PLN02310 triacylglycerol lipase
Probab=91.29 E-value=0.43 Score=42.87 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.1
Q ss_pred ccEEEEeechHHHHHHHHHHHhh
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
.+|.|.|||+||.+|...|....
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH
Confidence 47999999999999999987653
No 220
>PLN02753 triacylglycerol lipase
Probab=91.26 E-value=0.46 Score=43.92 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=21.5
Q ss_pred CccEEEEeechHHHHHHHHHHHhhc
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
.-+|.+.|||+||.+|...|.....
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHH
Confidence 3589999999999999999986544
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.25 E-value=0.76 Score=42.50 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=20.6
Q ss_pred ccEEEEeechHHHHHHHHHHHhhc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
-+|.|.|||+||.+|...|.....
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHH
Confidence 479999999999999999876543
No 222
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.75 E-value=2.5 Score=35.06 Aligned_cols=26 Identities=23% Similarity=0.179 Sum_probs=22.8
Q ss_pred CCccEEEEeechHHHHHHHHHHHhhc
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
..+++.|+|+|+|+.++...+.+...
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 45789999999999999999888765
No 223
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=90.64 E-value=3 Score=36.08 Aligned_cols=39 Identities=13% Similarity=0.027 Sum_probs=32.8
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHH
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 171 (316)
.+.++.++.||.++. -..++|+++|+|-|+..|--+|.-
T Consensus 104 ~~nI~~AYrFL~~~y------------epGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 104 VQNIREAYRFLIFNY------------EPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHhc------------CCCCeEEEeeccchhHHHHHHHHH
Confidence 478999999999985 334899999999999999888764
No 224
>PLN02761 lipase class 3 family protein
Probab=90.43 E-value=0.6 Score=43.14 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhc
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQ 174 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 174 (316)
-+++...++-|.+.....+ .-..-+|.+.|||+||.+|...|.....
T Consensus 271 R~qVl~eV~rL~~~Y~~~~-------k~e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEE-------EGHEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred HHHHHHHHHHHHHhccccc-------CCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 3456666666655421100 0122479999999999999999976543
No 225
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.90 E-value=0.96 Score=42.04 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=49.3
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhC-C-----CCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCCCC
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKES-G-----WKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKDYP 316 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~-g-----~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 316 (316)
.+++.||..|.++. .+..+++++.+. | +..-.++.+.||++|+.....+. ..+.+..+++|+++--.|
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~---~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPD---PFDALTALVDWVENGKAP 430 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCC---CCCHHHHHHHHHhCCCCC
Confidence 79999999999884 667777777553 2 12246888899999988743221 247889999999875443
No 226
>PLN02847 triacylglycerol lipase
Probab=88.48 E-value=0.85 Score=42.86 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=19.6
Q ss_pred ccEEEEeechHHHHHHHHHHHh
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
-++.|.|||+||.+|..++...
T Consensus 251 YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 4899999999999999988764
No 227
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.14 E-value=1.9 Score=27.78 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=18.5
Q ss_pred CceeeeEEecCCCceEEEEEecCCC----CCCCCccEEEEEcC
Q 043192 38 HVDSKDIIYSSEHNLSARIYFPNNT----NRNQKLPLVVYFHG 76 (316)
Q Consensus 38 ~~~~~~v~~~~~~~~~~~~~~P~~~----~~~~~~p~vv~iHG 76 (316)
+...++-.+.+.++--+.++.-+.. ....++|+|++.||
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG 51 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG 51 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECC
Confidence 3445556666666666666642222 23567899999999
No 228
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.82 E-value=2.6 Score=37.01 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=35.9
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhccc----ccCCccceeEEecccccCC
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEK----LEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 195 (316)
...++.+|.|.|.||+.+-.+|.+.-+.. .++..++|+++-.|+++..
T Consensus 48 ~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 48 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 45688999999999999988887653321 1245789999988876543
No 229
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=87.16 E-value=14 Score=32.89 Aligned_cols=110 Identities=18% Similarity=0.138 Sum_probs=62.9
Q ss_pred ceEEEEEecCCCCCCCCccEEEEEcCCcccccCcc----hhhhHHHHHHHHHhcCcEEEeec-CC---CC----------
Q 043192 51 NLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAF----SLTYHAYMNTLVSHAKIIAVSVD-YR---RA---------- 112 (316)
Q Consensus 51 ~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~----~~~~~~~~~~l~~~~g~~v~~~d-~r---~~---------- 112 (316)
...+.+|.|.+.. .....+++.-|+-+..+... ...-.+.+...+++....++++. -+ +.
T Consensus 109 ~HnV~iyiPd~v~--~~~allvvnnG~~~kk~~~~~~~s~d~~~e~la~var~t~tpiisVsDvPNQ~lty~ddg~~lrE 186 (507)
T COG4287 109 FHNVGIYIPDNVN--YKDALLVVNNGTRRKKEGERYYDSFDLDVEELAWVARETETPIISVSDVPNQYLTYQDDGKPLRE 186 (507)
T ss_pred hhcceEEccCCcC--hhceEEEEecCcccCCCCccccCCccCCHHHHHHHHHhccCceEEeccCCCcceeeccCCccccc
Confidence 3567899998873 34456777777544322211 01122455666777666666553 11 00
Q ss_pred --------------CC--CCCCcc---hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 113 --------------PE--DPVPAA---HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 113 --------------~~--~~~~~~---~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
|+ ...|-. +--+..+++..++..+ +.+.++..+.|.|--|..+..-|...
T Consensus 187 DesVa~SwslFmeaPeqr~~lPL~VPMv~a~srAMdlAq~eL~----------q~~Ik~F~VTGaSKRgWttwLTAIaD 255 (507)
T COG4287 187 DESVAHSWSLFMEAPEQRPFLPLLVPMVYAVSRAMDLAQDELE----------QVEIKGFMVTGASKRGWTTWLTAIAD 255 (507)
T ss_pred hHHHHHHHHHHhcCcccccCcccccHHHHHHHHHHHHHHhhhh----------heeeeeEEEeccccchHHHHHHHhcC
Confidence 11 011221 2344455555555543 36678999999999999998888764
No 230
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.67 E-value=1.5 Score=37.22 Aligned_cols=24 Identities=42% Similarity=0.623 Sum_probs=21.3
Q ss_pred CCccEEEEeechHHHHHHHHHHHh
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
...+|.|.|||.||.+|..+..++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 347899999999999999998876
No 231
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.67 E-value=1.5 Score=37.22 Aligned_cols=24 Identities=42% Similarity=0.623 Sum_probs=21.3
Q ss_pred CCccEEEEeechHHHHHHHHHHHh
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
...+|.|.|||.||.+|..+..++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 347899999999999999998876
No 232
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=84.47 E-value=3.5 Score=38.87 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=49.1
Q ss_pred cEEEEEcCCccccc---hHHHHHHHHHhC-CCCcccEEEEeCCCcccccc---------cCCCcHHHHHHHHHHHHHHhc
Q 043192 246 RLLVFVAQLDLLRG---RGLYYVTKLKES-GWKGDAKVSEIMGETHVFHL---------LNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 246 P~li~~G~~D~~~~---~~~~~~~~l~~~-g~~~~~~~~~~~~~~H~~~~---------~~~~~~~~~~~~~~i~~fl~~ 312 (316)
|++|+||..|.+++ .++.|....+.. |...+.+|++++++.|.-.+ +-|.-....+.++.|..+|++
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~~ 636 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHLKS 636 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHhhc
Confidence 99999999998774 456666555432 43126899999999885432 234556678899999999987
Q ss_pred CC
Q 043192 313 KD 314 (316)
Q Consensus 313 ~~ 314 (316)
..
T Consensus 637 G~ 638 (690)
T PF10605_consen 637 GA 638 (690)
T ss_pred CC
Confidence 43
No 233
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=82.54 E-value=9.8 Score=33.85 Aligned_cols=91 Identities=10% Similarity=0.177 Sum_probs=54.9
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHh--------cCcEEEeecCCCCC--CCCCCcchhh--HHHHHHHHHH
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSH--------AKIIAVSVDYRRAP--EDPVPAAHED--SWTALKWVAS 133 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~--------~g~~v~~~d~r~~~--~~~~~~~~~d--~~~~~~~l~~ 133 (316)
+.+| ++++||. .|+.. .++.++.-|-.. .-+.|++|..++.+ +.+-...+.. +..+++-|.-
T Consensus 151 ~v~P-lLl~HGw---PGsv~--EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMl 224 (469)
T KOG2565|consen 151 KVKP-LLLLHGW---PGSVR--EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLML 224 (469)
T ss_pred cccc-eEEecCC---CchHH--HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHH
Confidence 3345 7889993 35543 456666555443 12668888766543 2222222222 2222332222
Q ss_pred hcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcc
Q 043192 134 HANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQE 175 (316)
Q Consensus 134 ~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~ 175 (316)
++.-++.+|-|.-.|..++..+|.-+|++
T Consensus 225 -------------RLg~nkffiqGgDwGSiI~snlasLyPen 253 (469)
T KOG2565|consen 225 -------------RLGYNKFFIQGGDWGSIIGSNLASLYPEN 253 (469)
T ss_pred -------------HhCcceeEeecCchHHHHHHHHHhhcchh
Confidence 25568999999999999999999988764
No 234
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=81.07 E-value=1.2 Score=40.11 Aligned_cols=64 Identities=14% Similarity=0.243 Sum_probs=41.3
Q ss_pred cEEEEEcCCccccchH-HHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLRGRG-LYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|++|++|+-|.+.++. ..+.+.+...|+ .+=.+.+||.|+.... +..+......+.|++||.+.
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGi--A~LtvDmPG~G~s~~~--~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGI--AMLTVDMPGQGESPKW--PLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT---EEEEE--TTSGGGTTT---S-S-CCHHHHHHHHHHHHS
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCC--EEEEEccCCCcccccC--CCCcCHHHHHHHHHHHHhcC
Confidence 9999999999998654 555677888998 7777888999986431 22233456778899998763
No 235
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=79.20 E-value=4.9 Score=35.57 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=31.6
Q ss_pred CCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccc
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~ 192 (316)
..++|.|+|||+|+.+....+.+..++.. ...|+-++++...+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~-~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA-FGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc-cCeEeeEEEecCCC
Confidence 44679999999999999999887765421 23467777776544
No 236
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.53 E-value=9.3 Score=32.63 Aligned_cols=85 Identities=19% Similarity=0.112 Sum_probs=49.1
Q ss_pred HhcCcEEEeecCCCCCCC-CC----CcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 98 SHAKIIAVSVDYRRAPED-PV----PAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 98 ~~~g~~v~~~d~r~~~~~-~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
-....+++++.|...|.- +| ....+-....++.+.+....+. .-+..|++|.|.|.|+..+.......
T Consensus 58 ~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP-------~~~RPkL~l~GeSLGa~g~~~af~~~ 130 (289)
T PF10081_consen 58 YGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLP-------EDRRPKLYLYGESLGAYGGEAAFDGL 130 (289)
T ss_pred hCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCC-------cccCCeEEEeccCccccchhhhhccH
Confidence 344688999998865421 11 1122333334444443333322 24557899999999998887765433
Q ss_pred hcccccCCccceeEEecccc
Q 043192 173 GQEKLEGINIDGICLLFPYF 192 (316)
Q Consensus 173 ~~~~~~~~~~~~~i~~~p~~ 192 (316)
.+- ...++|++...|-.
T Consensus 131 ~~~---~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 131 DDL---RDRVDGALWVGPPF 147 (289)
T ss_pred HHh---hhhcceEEEeCCCC
Confidence 221 23588888777643
No 237
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=78.42 E-value=7.6 Score=30.86 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=26.9
Q ss_pred CCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEe-cccc
Q 043192 149 DFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLL-FPYF 192 (316)
Q Consensus 149 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~-~p~~ 192 (316)
...++.++|||+|..++...+... ...++-++++ ||-+
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~~------~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQG------GLRVDDVVLVGSPGM 145 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhhC------CCCcccEEEECCCCC
Confidence 456899999999999998887762 2346666543 3433
No 238
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.92 E-value=51 Score=29.37 Aligned_cols=63 Identities=17% Similarity=0.185 Sum_probs=48.5
Q ss_pred cEEEEEcCCcccc--chHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 246 RLLVFVAQLDLLR--GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 246 P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
+.+.+.+..|.++ ++.++|.+..++.|. .++-+-+.++.|.-... .......+...+|++...
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~--~v~s~~~~ds~H~~h~r----~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGV--NVKSVKFKDSEHVAHFR----SFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCc--eEEEeeccCccceeeec----cCcHHHHHHHHHHHHhcc
Confidence 7788888899877 477889899999998 88888888888876432 223577888888887643
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=77.79 E-value=3.9 Score=35.09 Aligned_cols=41 Identities=15% Similarity=0.121 Sum_probs=33.1
Q ss_pred chhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 120 AHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 120 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.-..+..++.+|.++. -..++|+|+|+|-|+..|-.++...
T Consensus 73 ~~~~I~~ay~~l~~~~------------~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNY------------EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhcc------------CCcceEEEEecCccHHHHHHHHHHH
Confidence 3467888899987764 3447899999999999999998664
No 240
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=75.80 E-value=10 Score=25.30 Aligned_cols=42 Identities=19% Similarity=0.253 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.+.+...++|++++..- -.+.++-|.|.|.|=.+|..+++.+
T Consensus 20 ~~~V~~qI~yvk~~~~~----------~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKI----------NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC-------------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC----------CCCceEEEEecCCcccHHHHHHHHh
Confidence 46788888999886532 3368899999999999998888875
No 241
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=75.03 E-value=6.3 Score=31.67 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=43.8
Q ss_pred CCCCCcEEEEEcCCccccc--hHHHHHHHHHhCCCCc-ccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 241 SLGCNRLLVFVAQLDLLRG--RGLYYVTKLKESGWKG-DAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 241 ~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.+...++|-+-|+.|.+.. ++..- ..|.. |++. ....++.+|++| +.++. ...-..+..-.|.+|+.+|
T Consensus 131 aI~~taLlTVEGe~DDIsg~GQT~AA-~~LC~-glp~~~k~~~~~~g~GH-YGlF~-G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 131 AIRRTALLTVEGERDDISGPGQTHAA-HDLCT-GLPADMKRHHLQPGVGH-YGLFN-GSRWREEIYPRIREFIRQH 202 (202)
T ss_pred HcccceeEEeecCcccCCcchHHHHH-HHHhc-CCCHHHhhhcccCCCCe-eeccc-chhhhhhhhHHHHHHHHhC
Confidence 3433378889999998874 44432 23322 2211 346667799999 55554 3456678888888998765
No 242
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=74.39 E-value=6.3 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=24.8
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEee
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSV 107 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~ 107 (316)
..|.++++|||.- . +.+..+.+++.+.|+.++.+
T Consensus 30 ~~~~~~lvhGga~-----~--GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAP-----K--GADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCC-----C--CHHHHHHHHHHHCCCeeEEe
Confidence 4578999999542 2 45677888999999876654
No 243
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=71.88 E-value=7.3 Score=35.15 Aligned_cols=94 Identities=20% Similarity=0.125 Sum_probs=61.9
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCC----------CCCcchhhHHHHHHHHHHhc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPED----------PVPAAHEDSWTALKWVASHA 135 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~----------~~~~~~~d~~~~~~~l~~~~ 135 (316)
..+|+|++--|-+-. .++ .+.-..+++ +-+-++++||....+ +..+...|...+++.++.-.
T Consensus 61 ~drPtV~~T~GY~~~-~~p----~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY 132 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVS-TSP----RRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY 132 (448)
T ss_pred CCCCeEEEecCcccc-cCc----cccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc
Confidence 356998888774421 121 122233443 455778899965332 23445678889998887643
Q ss_pred CCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEE
Q 043192 136 NGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICL 187 (316)
Q Consensus 136 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~ 187 (316)
+.+-+-.|-|=||+.++.+=..+|+ .+++.|.
T Consensus 133 --------------~~kWISTG~SKGGmTa~y~rrFyP~------DVD~tVa 164 (448)
T PF05576_consen 133 --------------PGKWISTGGSKGGMTAVYYRRFYPD------DVDGTVA 164 (448)
T ss_pred --------------cCCceecCcCCCceeEEEEeeeCCC------CCCeeee
Confidence 4678889999999999988777755 4777775
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.92 E-value=18 Score=34.35 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=20.8
Q ss_pred CCCccEEEEeechHHHHHHHHHHHh
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.|.+.|.-+||||||.++=.+++..
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHH
Confidence 5577899999999999988887754
No 245
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=60.84 E-value=13 Score=30.98 Aligned_cols=35 Identities=20% Similarity=0.097 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHh
Q 043192 126 TALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
-++++|.++. +.++.-.+.|-|+|+.++..++...
T Consensus 16 GVl~~L~e~g------------i~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEAG------------VINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHcC------------CCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 3566777663 4445678999999999999999864
No 246
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=60.23 E-value=37 Score=22.78 Aligned_cols=61 Identities=13% Similarity=-0.049 Sum_probs=41.1
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCccccccc-CCCcHHHHHHHHHHHHHHh
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLL-NPSSLHAIRMLKTTVDFIH 311 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~~i~~fl~ 311 (316)
=++|+||-.+-.- .-..+++.|.+.|. .+..++.-+|+...- ....+..+++++++..|++
T Consensus 18 ~v~i~HG~~eh~~-ry~~~a~~L~~~G~----~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSG-RYAHLAEFLAEQGY----AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHH-HHHHHHHHHHhCCC----EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 4778888876543 23457788888875 777777778876632 1233455788888888764
No 247
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=57.96 E-value=67 Score=33.70 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
...|.+.|+|. ..|.. ..+..++.+..+....+.+.. ..+.+.++++..|...+....
T Consensus 2121 se~~~~Ffv~p---IEG~t------t~l~~la~rle~PaYglQ~T~------~vP~dSies~A~~yirqirkv------- 2178 (2376)
T KOG1202|consen 2121 SEEPPLFFVHP---IEGFT------TALESLASRLEIPAYGLQCTE------AVPLDSIESLAAYYIRQIRKV------- 2178 (2376)
T ss_pred ccCCceEEEec---cccch------HHHHHHHhhcCCcchhhhccc------cCCcchHHHHHHHHHHHHHhc-------
Confidence 34578999997 33332 334567777666555554332 122333444444333332221
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
-.....-|.|.|+|+.++..+|....+.+ ....+|++.+
T Consensus 2179 --QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~----~~~~lillDG 2217 (2376)
T KOG1202|consen 2179 --QPEGPYRLAGYSYGACLAFEMASQLQEQQ----SPAPLILLDG 2217 (2376)
T ss_pred --CCCCCeeeeccchhHHHHHHHHHHHHhhc----CCCcEEEecC
Confidence 23357899999999999999998766543 3455777665
No 248
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.72 E-value=22 Score=31.98 Aligned_cols=19 Identities=32% Similarity=0.520 Sum_probs=15.3
Q ss_pred CccEEEEeechHHHHHHHH
Q 043192 150 FQKVILSGDSAGGNIAHHM 168 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~ 168 (316)
.++|..+|||.||.++-.+
T Consensus 149 i~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYA 167 (405)
T ss_pred cceeeeeeeecCCeeeeEE
Confidence 4799999999999766443
No 249
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.49 E-value=25 Score=29.86 Aligned_cols=25 Identities=32% Similarity=0.547 Sum_probs=20.8
Q ss_pred CCCccEEEEeechHHHHHHHHHHHh
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
..-.+..|+|-||||.+|..+...+
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccC
Confidence 4457899999999999999887654
No 250
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=54.99 E-value=1.2e+02 Score=26.66 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=69.1
Q ss_pred EecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHH-------------HHHHHhcCcEEEeecCCC
Q 043192 45 IYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYM-------------NTLVSHAKIIAVSVDYRR 111 (316)
Q Consensus 45 ~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~-------------~~l~~~~g~~v~~~d~r~ 111 (316)
.+-.+......+|+-.... +.-+|..+++.||....+.. +..|- ..++.. ..++-+|-+.
T Consensus 9 ~vr~~a~~F~wly~~~~~~-ks~~pl~lwlqGgpGaSstG----~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPV 81 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATANV-KSERPLALWLQGGPGASSTG----FGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPV 81 (414)
T ss_pred eeecCceEEEEEeeecccc-ccCCCeeEEecCCCCCCCcC----ccchhhcCCcccCCCcCCchhhhh--ccEEEecCCC
Confidence 3333444555666654432 25679999999977533221 11110 112222 3456666554
Q ss_pred CCCCC-------CC----cchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccc---
Q 043192 112 APEDP-------VP----AAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKL--- 177 (316)
Q Consensus 112 ~~~~~-------~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~--- 177 (316)
+...+ +. +...|+...++-+-..-+ .+...+.+|+-.|.||-+|..+++..-...-
T Consensus 82 GaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~----------e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~ 151 (414)
T KOG1283|consen 82 GAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHP----------EFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE 151 (414)
T ss_pred cCceeeecCcccccccHHHHHHHHHHHHHHHHhcCc----------cccccceEEEEhhcccchhhhhhhhHHHHHhcCc
Confidence 43222 11 123444444443333222 3667889999999999999999876432110
Q ss_pred cCCccceeEEeccc
Q 043192 178 EGINIDGICLLFPY 191 (316)
Q Consensus 178 ~~~~~~~~i~~~p~ 191 (316)
-...+.++++=.+|
T Consensus 152 i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 152 IKLNFIGVALGDSW 165 (414)
T ss_pred eeecceeEEccCcc
Confidence 13456777774443
No 251
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=54.27 E-value=17 Score=29.82 Aligned_cols=35 Identities=11% Similarity=-0.060 Sum_probs=26.0
Q ss_pred ccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
++|.|+++|||-.+|..+.... .++..+++.+..-
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--------~~~~aiAINGT~~ 91 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--------PFKRAIAINGTPY 91 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--------CcceeEEEECCCC
Confidence 6899999999999987775432 3667777776543
No 252
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=52.68 E-value=1.9e+02 Score=26.50 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=31.2
Q ss_pred cCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 147 YADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 147 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
.+||+++++.+.+.+++-++.+.+..|. .+..+-.|++.+.
T Consensus 143 ~fdP~~~Vv~~G~T~ane~l~fcLadpg--------dafLvPtPyY~gf 183 (471)
T KOG0256|consen 143 KFDPERVVVTNGATSANETLMFCLADPG--------DAFLVPTPYYPGF 183 (471)
T ss_pred ccCccceEEecccchhhHHHHHHhcCCC--------ceeeecCCCCCcc
Confidence 4899999999999999999999887654 3444556666444
No 253
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=49.40 E-value=45 Score=24.44 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=24.4
Q ss_pred CccEEEEEcCCcccc-cCc-----------------chhhhHHHHHHHHHhcCcEEEee
Q 043192 67 KLPLVVYFHGGAFIF-ENA-----------------FSLTYHAYMNTLVSHAKIIAVSV 107 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~-g~~-----------------~~~~~~~~~~~l~~~~g~~v~~~ 107 (316)
.+.++|+|||.-|.. ... .....+......+.+.|+.|+.+
T Consensus 55 ~~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 55 EYRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred CCCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 356899999976542 110 01123334455667779999876
No 254
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=48.84 E-value=1e+02 Score=22.47 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=52.9
Q ss_pred CCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCC
Q 043192 33 LDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRA 112 (316)
Q Consensus 33 ~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~ 112 (316)
.++..++.+-.|.+++|-+-++.++-|--.. . -.-+.+-+..+..|+........++..+.++.|..++-+.|+.+
T Consensus 54 edpk~GLkYAAvEVPsGVRGRmaliGPLIEe---a-dAAIi~~~~p~~FGCiGC~RTNEl~~ylvR~k~iPiLelkYP~s 129 (152)
T COG4050 54 EDPKRGLKYAAVEVPSGVRGRMALIGPLIEE---A-DAAIIVEEAPFGFGCIGCARTNELCVYLVRRKGIPILELKYPRS 129 (152)
T ss_pred ccccccceeeEEecCCCccceeeeeehhhhh---c-ceeeEeccCCcccceecccccchHHHHHhhhcCCceEEEeCCCc
Confidence 3556788888888888755566666664321 1 23355666666666665545567888899999999999988865
Q ss_pred C
Q 043192 113 P 113 (316)
Q Consensus 113 ~ 113 (316)
.
T Consensus 130 ~ 130 (152)
T COG4050 130 E 130 (152)
T ss_pred H
Confidence 4
No 255
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=48.29 E-value=45 Score=26.59 Aligned_cols=64 Identities=22% Similarity=0.376 Sum_probs=44.7
Q ss_pred hHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHH
Q 043192 89 YHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHM 168 (316)
Q Consensus 89 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 168 (316)
...+...+...-|+.+++|.|.++ ++..++ .+++|+.... ...+++.+++.|.|+..++..
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~pg~lK---naiD~l~~~~------------~~~Kpv~~~~~s~g~~~~~~a 118 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YPGALK---NAIDWLSREA------------LGGKPVLLLGTSGGGAGGLRA 118 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CCHHHH---HHHHhCCHhH------------hCCCcEEEEecCCCchhHHHH
Confidence 556677777777899999988764 344443 5677776552 445788888888888777766
Q ss_pred HHH
Q 043192 169 GIR 171 (316)
Q Consensus 169 a~~ 171 (316)
..+
T Consensus 119 ~~~ 121 (184)
T COG0431 119 QNQ 121 (184)
T ss_pred HHH
Confidence 554
No 256
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=45.95 E-value=1e+02 Score=28.26 Aligned_cols=64 Identities=9% Similarity=0.038 Sum_probs=37.7
Q ss_pred cEEEEEcCCcccc-chHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLR-GRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|++|++|+-|... +.-..+.+.|.+.|. .+-..-++ +|+.....+...........+++||.+.
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy--~vl~~D~p--G~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGI--AMLTIDMP--SVGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCC--EEEEECCC--CCCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 8999999988754 334456778888876 44444445 4544321111122334446788888754
No 257
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=45.91 E-value=32 Score=27.00 Aligned_cols=20 Identities=30% Similarity=0.306 Sum_probs=17.3
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
=.+.|.|+|+.+|..++...
T Consensus 30 d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 30 DIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eEEEEECHHHHHHHHHHcCC
Confidence 37999999999999998654
No 258
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=45.12 E-value=26 Score=32.20 Aligned_cols=24 Identities=29% Similarity=0.291 Sum_probs=19.4
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhh
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
+.++ +|.|.|+|+.+|..++....
T Consensus 100 l~p~--vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 100 LLPR--IISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred CCCC--EEEEECHHHHHHHHHHcCCH
Confidence 4443 79999999999999988544
No 259
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.00 E-value=35 Score=28.18 Aligned_cols=19 Identities=26% Similarity=0.303 Sum_probs=16.8
Q ss_pred EEEeechHHHHHHHHHHHh
Q 043192 154 ILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~ 172 (316)
.+.|.|+|+.+|..++...
T Consensus 31 ~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 31 AISGTSAGALVGGLFASGI 49 (221)
T ss_pred EEEEeCHHHHHHHHHHcCC
Confidence 6999999999999998743
No 260
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=43.69 E-value=34 Score=27.26 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=17.7
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
=.+.|.|+||.+|..++...
T Consensus 29 d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 29 KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred ceEEEECHHHHHHHHHHcCC
Confidence 68899999999999998754
No 261
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=41.85 E-value=67 Score=25.04 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=42.0
Q ss_pred cEEEEEcCCcccc-chHHHHHHHHHhCCCCcccEEEEeC-----CCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLR-GRGLYYVTKLKESGWKGDAKVSEIM-----GETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~-~~~~~~~~~l~~~g~~~~~~~~~~~-----~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.+||+.++.|-.. ..++.++..|++.|. .+++.-.. +..|.-.+.-...-...++-+.+.+|+.+|
T Consensus 2 k~LIlYstr~GqT~kIA~~iA~~L~e~g~--qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~ 73 (175)
T COG4635 2 KTLILYSTRDGQTRKIAEYIASHLRESGI--QVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKH 73 (175)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHhhhcCC--eeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHH
Confidence 4899999999644 567888999999988 77766432 333322211112233456667777787764
No 262
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=41.73 E-value=39 Score=26.45 Aligned_cols=22 Identities=27% Similarity=0.354 Sum_probs=18.7
Q ss_pred cEEEEeechHHHHHHHHHHHhh
Q 043192 152 KVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 152 ~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
--.+.|-|+|+.++..++....
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 5678999999999999998643
No 263
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=41.63 E-value=22 Score=32.19 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=41.1
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHH
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFI 310 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl 310 (316)
-+|++.|+.|+-....-. +.+ |.. +..+...||++|+-.+..-..++..++...|.+|-
T Consensus 353 rmlFVYG~nDPW~A~~f~----l~~-g~~-ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 353 RMLFVYGENDPWSAEPFR----LGK-GKR-DSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred eEEEEeCCCCCcccCccc----cCC-CCc-ceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 599999999986643331 111 221 67777889999997765445567778888888885
No 264
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=40.94 E-value=56 Score=26.78 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHH
Q 043192 121 HEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 121 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 170 (316)
-+|-.-+++.++++.+.+ -..+.+++|||..--....++|.
T Consensus 117 k~DYe~~v~aik~~~ppl---------~k~e~~vlmgHGt~h~s~~~Yac 157 (265)
T COG4822 117 KNDYEICVEAIKDQIPPL---------NKDEILVLMGHGTDHHSNAAYAC 157 (265)
T ss_pred hhhHHHHHHHHHHhcCCc---------CcCeEEEEEecCCCccHHHHHHH
Confidence 378888999999886532 12356889999766666655554
No 265
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.82 E-value=42 Score=28.22 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.6
Q ss_pred EEEeechHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~ 170 (316)
.+.|.|+|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999974
No 266
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=38.41 E-value=45 Score=27.30 Aligned_cols=40 Identities=3% Similarity=0.035 Sum_probs=25.2
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR 110 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 110 (316)
.+.|.||.=.+ ++.....|-.-.+..+++.|+.+..++..
T Consensus 32 ~~~i~FIPtAs---~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTAS---VDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCc---cccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 56788887533 33332234455567778889888877644
No 267
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=38.18 E-value=49 Score=27.81 Aligned_cols=18 Identities=33% Similarity=0.268 Sum_probs=16.3
Q ss_pred EEeechHHHHHHHHHHHh
Q 043192 155 LSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 155 l~G~S~GG~~a~~~a~~~ 172 (316)
+.|.|+|+.+|..++...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 999999999999998753
No 268
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=37.72 E-value=69 Score=28.52 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=37.4
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC----C----------CCCCCCCcchhhHHHHHHHHHHhcC
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR----R----------APEDPVPAAHEDSWTALKWVASHAN 136 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r----~----------~~~~~~~~~~~d~~~~~~~l~~~~~ 136 (316)
||+|-||+ .|+. ...|+.+.+.+.|+.|++++-. - +.+.+.|.-++-.....+||++..+
T Consensus 89 VvIIGGG~--~GsS----~AfWLKer~rd~gl~VvVVErddtytqssT~lSvGGi~QQFSlpEnIqmSLF~a~Flr~a~e 162 (509)
T KOG2853|consen 89 VVIIGGGG--SGSS----TAFWLKERARDEGLNVVVVERDDTYTQSSTMLSVGGICQQFSLPENIQMSLFTAEFLRNARE 162 (509)
T ss_pred EEEECCCc--cchh----hHHHHHHHhhcCCceEEEEeccCcccccceeeeecceeeecccchhhhhhhHHHHHHHHHHH
Confidence 55555444 3553 3467788888889999988622 1 1223445555555566677776655
Q ss_pred CCC
Q 043192 137 GRG 139 (316)
Q Consensus 137 ~~~ 139 (316)
.+|
T Consensus 163 hl~ 165 (509)
T KOG2853|consen 163 HLG 165 (509)
T ss_pred hhc
Confidence 554
No 269
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=37.45 E-value=1.2e+02 Score=24.99 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=28.0
Q ss_pred HHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechH
Q 043192 92 YMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAG 161 (316)
Q Consensus 92 ~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 161 (316)
+...+...-|+.+++|.|-.+ ++.. +..+++|+....... .....+.+.++|.|.|
T Consensus 84 l~~~v~~ADgvii~TPEYn~s----ipg~---LKNaiDwls~~~~~~-------~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 84 LRQLSEWSEGQVWCSPERHGA----ITGS---QKDQIDWIPLSVGPV-------RPTQGKTLAVMQVSGG 139 (219)
T ss_pred HHHHHHhCCEEEEeCCccccC----cCHH---HHHHHHhcccCcccc-------cccCCCcEEEEEeCCc
Confidence 334444444565666655542 2322 335566665421000 0134577999999833
No 270
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=37.10 E-value=51 Score=27.65 Aligned_cols=20 Identities=25% Similarity=0.185 Sum_probs=17.6
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
-.+.|.|+|+.++..++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 48999999999999998754
No 271
>PRK10279 hypothetical protein; Provisional
Probab=36.65 E-value=49 Score=28.83 Aligned_cols=20 Identities=20% Similarity=0.195 Sum_probs=17.2
Q ss_pred cEEEEeechHHHHHHHHHHH
Q 043192 152 KVILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 152 ~i~l~G~S~GG~~a~~~a~~ 171 (316)
--.+.|.|+|+.++..+|..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 36789999999999999864
No 272
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=36.37 E-value=93 Score=22.13 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=31.8
Q ss_pred hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 260 RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 260 ~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
.+..|.+.|+..|+ ++++....+ ++ +.++-.+.+...++..++..|+.+-
T Consensus 12 ~AqaF~DYl~sqgI--~~~i~~~~~-~~-~~lwl~de~~~~~a~~el~~Fl~nP 61 (101)
T PF12122_consen 12 AAQAFIDYLASQGI--ELQIEPEGQ-GQ-FALWLHDEEHLEQAEQELEEFLQNP 61 (101)
T ss_dssp HHHHHHHHHHHTT----EEEE-SSS-E---EEEES-GGGHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHCCC--eEEEEECCC-Cc-eEEEEeCHHHHHHHHHHHHHHHHCC
Confidence 46789999999998 777776333 32 3333335577788888999999764
No 273
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=36.03 E-value=97 Score=24.80 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=27.1
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeec
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVD 108 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 108 (316)
+.+|.+||+-| ..|+..+ .....+.+.+.+.|+.+...|
T Consensus 20 ~~~~~viW~TG---LSGsGKS-TiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTG---LSGSGKS-TIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeec---CCCCCHH-HHHHHHHHHHHHcCCeEEEec
Confidence 45789999999 4555543 334444555566699999998
No 274
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=35.79 E-value=9.6 Score=33.47 Aligned_cols=26 Identities=27% Similarity=0.222 Sum_probs=20.2
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhh
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
.+.++..|.|.|+||..++...-++.
T Consensus 173 s~Ak~alLsGcSAGGLa~iLhCD~Fr 198 (402)
T KOG4287|consen 173 SNAKQALLSGCSAGGLASILHCDEFR 198 (402)
T ss_pred hHHHHHHhhcCCccchhheeehHHHH
Confidence 55678899999999988877665543
No 275
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.34 E-value=33 Score=30.06 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=16.2
Q ss_pred EEEeechHHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~ 171 (316)
.++|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 689999999999999864
No 276
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=33.44 E-value=2.1e+02 Score=24.03 Aligned_cols=62 Identities=13% Similarity=-0.053 Sum_probs=34.3
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|++++||--+.... -..+.+.|. . ..+++.++--||+...........+.+.+.+.++++..
T Consensus 27 plvllHG~~~~~~~-w~~~~~~L~---~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 27 PLLIFNGIGANLEL-VFPFIEALD---P--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL 88 (276)
T ss_pred cEEEEeCCCcchHH-HHHHHHHhc---c--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh
Confidence 89999996554221 122333343 2 56788887777876632111112345556666666654
No 277
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=31.66 E-value=81 Score=24.24 Aligned_cols=19 Identities=26% Similarity=0.288 Sum_probs=16.4
Q ss_pred ccEEEEeechHHHHHHHHH
Q 043192 151 QKVILSGDSAGGNIAHHMG 169 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a 169 (316)
.--.+.|.|+|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4467899999999999887
No 278
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.00 E-value=1.4e+02 Score=28.20 Aligned_cols=67 Identities=21% Similarity=0.140 Sum_probs=41.2
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecc
Q 043192 115 DPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFP 190 (316)
Q Consensus 115 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p 190 (316)
++|...++-...+-+.|.+..-.. ....++|-|+|+|.|+.+....+.+..++. ....|.-++++..
T Consensus 419 npWnia~dRa~kaG~lLAe~L~~r--------~qG~RPVTLVGFSLGARvIf~CL~~Lakkk-e~~iIEnViL~Ga 485 (633)
T KOG2385|consen 419 NPWNIALDRADKAGELLAEALCKR--------SQGNRPVTLVGFSLGARVIFECLLELAKKK-EVGIIENVILFGA 485 (633)
T ss_pred CchHHHhhHHHHHHHHHHHHHHHh--------ccCCCceeEeeeccchHHHHHHHHHHhhcc-cccceeeeeeccC
Confidence 455555555555555555432111 144578999999999999997777655432 1235666666553
No 279
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=29.81 E-value=2e+02 Score=23.67 Aligned_cols=64 Identities=13% Similarity=-0.047 Sum_probs=31.8
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCc---HHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSS---LHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~---~~~~~~~~~i~~fl~~~ 313 (316)
|++++||.-......-..+...+.+.|. +++.++--||+........ -..+.+.+++..+++..
T Consensus 27 ~vl~~hG~~g~~~~~~~~~~~~l~~~g~----~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (288)
T TIGR01250 27 KLLLLHGGPGMSHEYLENLRELLKEEGR----EVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL 93 (288)
T ss_pred eEEEEcCCCCccHHHHHHHHHHHHhcCC----EEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc
Confidence 8999999644332223334455554454 5555544445433211111 12355666666666543
No 280
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.42 E-value=65 Score=29.23 Aligned_cols=20 Identities=30% Similarity=0.607 Sum_probs=17.4
Q ss_pred EEEeechHHHHHHHHHHHhh
Q 043192 154 ILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~~ 173 (316)
+|.|.|+|+.+|..++....
T Consensus 114 ~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 114 IITGTATGALIAALVGVHTD 133 (391)
T ss_pred eEEEecHHHHHHHHHHcCCH
Confidence 59999999999999998543
No 281
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=28.89 E-value=1.4e+02 Score=23.19 Aligned_cols=39 Identities=13% Similarity=0.313 Sum_probs=26.4
Q ss_pred ccEEEEEcCCcccccCcch-hhhHHHHHHHHHhcCcEEEee
Q 043192 68 LPLVVYFHGGAFIFENAFS-LTYHAYMNTLVSHAKIIAVSV 107 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~-~~~~~~~~~l~~~~g~~v~~~ 107 (316)
+++|||++...++.|+... -.++.....+ .+.|+.|+.+
T Consensus 31 k~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef-~~~~a~V~GI 70 (157)
T COG1225 31 KPVVLYFYPKDFTPGCTTEACDFRDLLEEF-EKLGAVVLGI 70 (157)
T ss_pred CcEEEEECCCCCCCcchHHHHHHHHHHHHH-HhCCCEEEEE
Confidence 4899999999888887641 1233334444 5558988877
No 282
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.85 E-value=30 Score=29.31 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=15.1
Q ss_pred CCCccEEEEeechHHHHHHH
Q 043192 148 ADFQKVILSGDSAGGNIAHH 167 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~ 167 (316)
-+...|+++|||+|..=...
T Consensus 232 ~~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 232 SDIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred cCCCEEEEEeCCCchhhHHH
Confidence 45689999999999754333
No 283
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=28.79 E-value=49 Score=25.99 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=17.4
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
=.+.|.|+|+.+|..++...
T Consensus 30 d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 30 DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eEEEEeCHHHHHHHHHHcCC
Confidence 57899999999999998764
No 284
>COG5045 Ribosomal protein S10E [Translation, ribosomal structure and biogenesis]
Probab=28.15 E-value=84 Score=21.70 Aligned_cols=54 Identities=9% Similarity=0.069 Sum_probs=36.4
Q ss_pred HHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeech
Q 043192 93 MNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSA 160 (316)
Q Consensus 93 ~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 160 (316)
-++++++ |..|+.=|+.++.........-.+..++.-+.+. .=..++++|+||.
T Consensus 12 hq~Lf~~-gv~vakkDfnl~kH~el~ipNL~vika~qsl~S~-------------GYvkt~~~W~~~Y 65 (105)
T COG5045 12 HQRLFQK-GVAVAKKDFNLGKHRELEIPNLHVIKAMQSLISY-------------GYVKTIHVWRHSY 65 (105)
T ss_pred HHHHHHh-hhhHhhhhccccCCcccCCCchHHHHHHHHHhhc-------------ceeEEEeeeeeeE
Confidence 3566666 8888877877665444455555666666666654 2347899999997
No 285
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=28.06 E-value=79 Score=22.62 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=22.7
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecC
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDY 109 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~ 109 (316)
+|+|.| ..|+.. -.++..++++.|+.++..|-
T Consensus 1 vI~I~G---~~gsGK----ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISG---PPGSGK----STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEE---STTSSH----HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEEC---CCCCCH----HHHHHHHHHHHCCeEEEecc
Confidence 567777 345543 25677788878999998886
No 286
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.56 E-value=47 Score=25.84 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=17.2
Q ss_pred ccEEEEeechHHHHHHHHHHHh
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~ 172 (316)
.--.+.|-|.||.+|+.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3456999999999998888763
No 287
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=27.32 E-value=97 Score=26.58 Aligned_cols=20 Identities=20% Similarity=0.089 Sum_probs=16.3
Q ss_pred ccEEEEeechHHHHHHHHHH
Q 043192 151 QKVILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~ 170 (316)
..-+++|||+|-..|+.++-
T Consensus 82 ~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred cccEEEecCHHHHHHHHHhC
Confidence 34589999999999887764
No 288
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.24 E-value=1.6e+02 Score=24.56 Aligned_cols=40 Identities=10% Similarity=0.004 Sum_probs=23.4
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR 110 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 110 (316)
.|.|+||.=.+-. + +...|.......+.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~-~--~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVT-Q--SWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCC-C--CHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4668888643211 1 22234455566777789988877643
No 289
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=26.91 E-value=47 Score=28.93 Aligned_cols=17 Identities=29% Similarity=0.557 Sum_probs=15.4
Q ss_pred EEEeechHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~ 170 (316)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999986
No 290
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=26.80 E-value=54 Score=28.02 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=16.8
Q ss_pred EEEEeechHHHHHHHHHHH
Q 043192 153 VILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~ 171 (316)
=.+.|.|+|+.++..++..
T Consensus 40 d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 40 DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cEEEEECHHHHHHHHHHcC
Confidence 4689999999999999875
No 291
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=26.79 E-value=54 Score=28.65 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=17.0
Q ss_pred EEEEeechHHHHHHHHHHH
Q 043192 153 VILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~ 171 (316)
=.+.|.|+|+.++..++..
T Consensus 45 d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 5789999999999999876
No 292
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=26.74 E-value=1e+02 Score=26.77 Aligned_cols=19 Identities=37% Similarity=0.637 Sum_probs=16.7
Q ss_pred EEEeechHHHHHHHHHHHh
Q 043192 154 ILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~ 172 (316)
.+.|.|+|+.+|..++...
T Consensus 100 ~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 100 VISGSSAGAIVAALLGTHT 118 (298)
T ss_pred EEEEEcHHHHHHHHHHcCC
Confidence 5999999999999998753
No 293
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.21 E-value=58 Score=26.65 Aligned_cols=20 Identities=25% Similarity=0.199 Sum_probs=17.7
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
=.+.|.|+|+.+|+.++...
T Consensus 28 d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 28 DIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CEEEEECHHHHHHHHHHcCC
Confidence 47899999999999999865
No 294
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.77 E-value=1.3e+02 Score=22.37 Aligned_cols=13 Identities=46% Similarity=0.807 Sum_probs=10.6
Q ss_pred CCccEEEEEcCCc
Q 043192 66 QKLPLVVYFHGGA 78 (316)
Q Consensus 66 ~~~p~vv~iHGgg 78 (316)
..+|+|+-+||..
T Consensus 50 p~KpLVlSfHG~t 62 (127)
T PF06309_consen 50 PRKPLVLSFHGWT 62 (127)
T ss_pred CCCCEEEEeecCC
Confidence 4679999999944
No 295
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.72 E-value=91 Score=27.41 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=16.7
Q ss_pred EEEeechHHHHHHHHHHHh
Q 043192 154 ILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~ 172 (316)
.+.|-|+|+.+|..++...
T Consensus 99 ~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 99 VIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 5999999999999998753
No 296
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=25.71 E-value=1.5e+02 Score=21.30 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=31.6
Q ss_pred EEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHH
Q 043192 72 VYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVAS 133 (316)
Q Consensus 72 v~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~ 133 (316)
|++||- .|... -.++..++...++.++.++.............+.+...++.+.+
T Consensus 1 ill~G~---~G~GK----T~l~~~la~~l~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 1 ILLHGP---PGTGK----TTLARALAQYLGFPFIEIDGSELISSYAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp EEEESS---TTSSH----HHHHHHHHHHTTSEEEEEETTHHHTSSTTHHHHHHHHHHHHHHH
T ss_pred CEEECc---CCCCe----eHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 678983 34433 35677888888998888886533222223333444444444433
No 297
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=25.64 E-value=1.6e+02 Score=22.05 Aligned_cols=54 Identities=11% Similarity=-0.026 Sum_probs=35.5
Q ss_pred hHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCCC
Q 043192 260 RGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKDY 315 (316)
Q Consensus 260 ~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 315 (316)
.-..+-+.+++.|+ ++-+++.|=-+-.+....-..+..+++.+.|..-++++++
T Consensus 37 Dl~l~L~~~k~~g~--~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf 90 (130)
T PF04914_consen 37 DLQLLLDVCKELGI--DVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF 90 (130)
T ss_dssp HHHHHHHHHHHTT---EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT-
T ss_pred HHHHHHHHHHHcCC--ceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC
Confidence 44677888999999 9999999975543433222557788999999999988875
No 298
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=25.52 E-value=1e+02 Score=26.62 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=25.4
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCC
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAP 113 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~ 113 (316)
..|+|+|.-|+|+ .+.+++.. ||-|+..|+...+
T Consensus 251 ~vPmi~fakG~g~------------~Le~l~~t-G~DVvgLDWTvdp 284 (359)
T KOG2872|consen 251 PVPMILFAKGSGG------------ALEELAQT-GYDVVGLDWTVDP 284 (359)
T ss_pred CCceEEEEcCcch------------HHHHHHhc-CCcEEeecccccH
Confidence 4699999998653 24566555 9999999987654
No 299
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=25.38 E-value=6.4e+02 Score=24.58 Aligned_cols=40 Identities=30% Similarity=0.210 Sum_probs=31.3
Q ss_pred cEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCCC
Q 043192 152 KVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGSA 196 (316)
Q Consensus 152 ~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (316)
.|+..+-|-||..++..+.+..+ ..|++++..-|.+.+..
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~-----glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQ-----GLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccC-----CceeeEEecCCccCCCC
Confidence 36668999999999999876543 36999999888876553
No 300
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=25.38 E-value=1.9e+02 Score=22.48 Aligned_cols=36 Identities=19% Similarity=-0.020 Sum_probs=18.9
Q ss_pred CccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccc
Q 043192 150 FQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPY 191 (316)
Q Consensus 150 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~ 191 (316)
..+|+++|.|..|..-+.++--.+ ..+.+++-..|.
T Consensus 68 gk~I~~yGA~~kg~tlln~~g~~~------~~I~~vvD~np~ 103 (160)
T PF08484_consen 68 GKRIAGYGAGAKGNTLLNYFGLDN------DLIDYVVDDNPL 103 (160)
T ss_dssp T--EEEE---SHHHHHHHHHT--T------TTS--EEES-GG
T ss_pred CCEEEEECcchHHHHHHHHhCCCc------ceeEEEEeCChh
Confidence 478999999999998888764422 247777765554
No 301
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.25 E-value=64 Score=27.31 Aligned_cols=21 Identities=29% Similarity=0.085 Sum_probs=17.9
Q ss_pred EEEEeechHHHHHHHHHHHhh
Q 043192 153 VILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~~ 173 (316)
=.+.|.|+|+.++..++....
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCc
Confidence 378999999999999988643
No 302
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.90 E-value=1e+02 Score=26.00 Aligned_cols=20 Identities=25% Similarity=0.150 Sum_probs=16.9
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
-.+.|-|+|+.++..++...
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 38 RKIYGASAGALTATALVTGV 57 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCC
Confidence 56789999999999988754
No 303
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=24.83 E-value=4e+02 Score=22.74 Aligned_cols=66 Identities=12% Similarity=0.034 Sum_probs=39.0
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCccccccc----CCCcHHHHHHHHHHHHHHhcCCC
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLL----NPSSLHAIRMLKTTVDFIHGKDY 315 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~~i~~fl~~~~~ 315 (316)
|+.++..+.-...++...++..|..+|. +++-|....|.-... ........+-+..+.+||++.++
T Consensus 31 ~tiliA~Gf~rrmdh~agLA~YL~~NGF----hViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~ 100 (294)
T PF02273_consen 31 NTILIAPGFARRMDHFAGLAEYLSANGF----HVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGI 100 (294)
T ss_dssp -EEEEE-TT-GGGGGGHHHHHHHHTTT------EEEE---B-------------HHHHHHHHHHHHHHHHHTT-
T ss_pred CeEEEecchhHHHHHHHHHHHHHhhCCe----EEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCC
Confidence 6777777777777788889999999874 888888887732210 11234567788899999998775
No 304
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=24.68 E-value=82 Score=26.66 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=15.6
Q ss_pred EEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeec
Q 043192 71 VVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVD 108 (316)
Q Consensus 71 vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 108 (316)
+|++|||| ++...+++++|...-..+
T Consensus 27 ~VlVHGgg------------~~i~~~~~~~gi~~~~~~ 52 (257)
T cd04251 27 LIVVHGGG------------NYVNEYLKRLGVEPKFVT 52 (257)
T ss_pred EEEECCCH------------HHHHHHHHHcCCCcEEEe
Confidence 78999977 233445566665443343
No 305
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=24.63 E-value=1.6e+02 Score=22.88 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=22.0
Q ss_pred ccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeec
Q 043192 68 LPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVD 108 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d 108 (316)
+|.|||+-| ..|+..+-.......+| .+.|..+..+|
T Consensus 1 ~g~vIwltG---lsGsGKtTlA~~L~~~L-~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTG---LSGSGKTTLARALERRL-FARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEES---STTSSHHHHHHHHHHHH-HHTTS-EEEEE
T ss_pred CCEEEEEEC---CCCCCHHHHHHHHHHHH-HHcCCcEEEec
Confidence 478999999 44555432333333444 45599999887
No 306
>COG4425 Predicted membrane protein [Function unknown]
Probab=24.56 E-value=1.7e+02 Score=27.14 Aligned_cols=60 Identities=17% Similarity=0.171 Sum_probs=33.9
Q ss_pred HHhcCcEEEeecCCCCC-------CCCCCcch--hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHH
Q 043192 97 VSHAKIIAVSVDYRRAP-------EDPVPAAH--EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHH 167 (316)
Q Consensus 97 ~~~~g~~v~~~d~r~~~-------~~~~~~~~--~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~ 167 (316)
+....++.+++.|..-+ +..+.... .=.++++.++++.. .-...|.+|.|.|.|++-...
T Consensus 345 L~~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP-----------~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 345 LYNGDVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLP-----------KSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HhCCceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCC-----------cCCCCceEEeccccccccCcc
Confidence 34446778888877332 11122111 11234445555544 244579999999999876654
No 307
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.40 E-value=97 Score=26.94 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=19.5
Q ss_pred ccEEEEeechHHHHHHHHHHHhh
Q 043192 151 QKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
..-.|.|.|||+.++..+|....
T Consensus 39 ~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 39 PIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred CccEEEecCHHHHHHHHHHcCCC
Confidence 45789999999999999998643
No 308
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=24.38 E-value=2.7e+02 Score=25.01 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=47.8
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCcccccccC
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLKTYA 148 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (316)
.-|+|-|-.++...+....-=+..++.+....|...+.+ |+..=..+-...+.|+.+-++++++-.
T Consensus 267 APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnf-y~~~isc~~~A~v~~v~~Hi~hIr~Va------------- 332 (419)
T KOG4127|consen 267 APVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNF-YPGFISCSDRATVSDVADHINHIRAVA------------- 332 (419)
T ss_pred CceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEe-ecccccCCCcccHHHHHHHHHHHHHhh-------------
Confidence 347999988876655442222456666766666555544 332111223445899999999999863
Q ss_pred CCccEEEEeechH
Q 043192 149 DFQKVILSGDSAG 161 (316)
Q Consensus 149 d~~~i~l~G~S~G 161 (316)
..+.|+|.|.=-|
T Consensus 333 G~~hIGlGg~yDG 345 (419)
T KOG4127|consen 333 GIDHIGLGGDYDG 345 (419)
T ss_pred ccceeeccCCcCC
Confidence 3467777764433
No 309
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.36 E-value=63 Score=28.75 Aligned_cols=18 Identities=28% Similarity=0.481 Sum_probs=16.2
Q ss_pred EEEeechHHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~ 171 (316)
.++|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999999864
No 310
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.35 E-value=85 Score=28.70 Aligned_cols=20 Identities=30% Similarity=0.488 Sum_probs=17.3
Q ss_pred EEEeechHHHHHHHHHHHhh
Q 043192 154 ILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~~~ 173 (316)
++.|.|+|+.+|..++.+..
T Consensus 98 iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 98 VISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred EEEEECHHHHHHHHHHcCCH
Confidence 59999999999999998543
No 311
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.34 E-value=64 Score=27.81 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=17.2
Q ss_pred EEEEeechHHHHHHHHHHHh
Q 043192 153 VILSGDSAGGNIAHHMGIRQ 172 (316)
Q Consensus 153 i~l~G~S~GG~~a~~~a~~~ 172 (316)
=.+.|.|.||.+|+.++...
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 37899999999999998754
No 312
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=24.29 E-value=2.7e+02 Score=23.55 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=35.2
Q ss_pred cEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHH
Q 043192 69 PLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSW 125 (316)
Q Consensus 69 p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~ 125 (316)
-.++|++.| .++.+....+.+..++.++|+.|+.+..-+.+...++....|..
T Consensus 145 ~GL~fFy~s----~Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~fp~~~~d~g 197 (248)
T PRK13703 145 YGLMFFYRG----QDPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPLLPDSRTDQG 197 (248)
T ss_pred ceEEEEECC----CCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCccChh
Confidence 456666653 35555567788899999999998766655555445666554443
No 313
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=24.26 E-value=3.1e+02 Score=21.25 Aligned_cols=62 Identities=10% Similarity=-0.052 Sum_probs=34.4
Q ss_pred EEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCC--CcHHHHHHHHHHHHHHhcCC
Q 043192 247 LLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNP--SSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 247 ~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~~~~~i~~fl~~~~ 314 (316)
++++||.-..... -..+.+.|. .| .+++.++--+|+.....+ .....++..+++.+++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~~l~-~~----~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~ 64 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAEALA-RG----YRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG 64 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHHHHH-TT----SEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT
T ss_pred eEEECCCCCCHHH-HHHHHHHHh-CC----CEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc
Confidence 5788888776532 334667774 44 455555444455442211 12334677778888887654
No 314
>PLN02578 hydrolase
Probab=23.65 E-value=2.5e+02 Score=24.85 Aligned_cols=62 Identities=11% Similarity=-0.014 Sum_probs=35.6
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcC
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGK 313 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 313 (316)
|++++||--..... -......|.+ ..+++.++--||+.....+..-....+.+++.+|+++.
T Consensus 88 ~vvliHG~~~~~~~-w~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~ 149 (354)
T PLN02578 88 PIVLIHGFGASAFH-WRYNIPELAK-----KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV 149 (354)
T ss_pred eEEEECCCCCCHHH-HHHHHHHHhc-----CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh
Confidence 89999997664221 1222334432 46777777777876532221122345567777777654
No 315
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=23.21 E-value=3.2e+02 Score=23.91 Aligned_cols=64 Identities=11% Similarity=0.047 Sum_probs=39.9
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
=++++||-.....-.-..++..|...|. .+--.-++|.|+.-. .....+....+++++.+|+.+
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~--~v~a~D~~GhG~SdG-l~~yi~~~d~~v~D~~~~~~~ 119 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGF--AVYAIDYEGHGRSDG-LHAYVPSFDLVVDDVISFFDS 119 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCC--eEEEeeccCCCcCCC-CcccCCcHHHHHHHHHHHHHH
Confidence 4788888666543334557788888876 444455555444332 223445557888888888874
No 316
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=22.92 E-value=1.9e+02 Score=26.95 Aligned_cols=64 Identities=14% Similarity=0.382 Sum_probs=41.7
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhC-----------------C-CCc-----------ccEEEEeCCCcccccccCC
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKES-----------------G-WKG-----------DAKVSEIMGETHVFHLLNP 294 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~-----------------g-~~~-----------~~~~~~~~~~~H~~~~~~~ 294 (316)
++||..|+.|.+++ -.+++.++|.-. + +.| +.+++.+.+++|....
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~--- 442 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM--- 442 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh---
Confidence 79999999998774 345555555411 1 000 2456667789995443
Q ss_pred CcHHHHHHHHHHHHHHhcCC
Q 043192 295 SSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 295 ~~~~~~~~~~~i~~fl~~~~ 314 (316)
++.+.+.+.+.+|+....
T Consensus 443 --d~P~~~~~~i~~fl~~~~ 460 (462)
T PTZ00472 443 --DQPAVALTMINRFLRNRP 460 (462)
T ss_pred --hHHHHHHHHHHHHHcCCC
Confidence 556788888889987643
No 317
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=22.42 E-value=4.5e+02 Score=21.76 Aligned_cols=56 Identities=13% Similarity=0.063 Sum_probs=35.4
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCc-EEEeecCCCCCCCCCCcchhhHHHHHHHHHHhc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKI-IAVSVDYRRAPEDPVPAAHEDSWTALKWVASHA 135 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~-~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~ 135 (316)
+..-+|++.||.- ..+...+.-+..++.++|| .|++..--+. .++..++++|+++.
T Consensus 136 k~e~~vlmgHGt~-----h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------P~~d~vi~~l~~~~ 192 (265)
T COG4822 136 KDEILVLMGHGTD-----HHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------PLVDTVIEYLRKNG 192 (265)
T ss_pred cCeEEEEEecCCC-----ccHHHHHHHHHHHHHhcCCCceEEEEecCC---------CcHHHHHHHHHHcC
Confidence 4557889999833 2222456667788888888 5554432222 24667788998875
No 318
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=22.41 E-value=3.1e+02 Score=23.77 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=15.7
Q ss_pred ccCCCCCcEEEEEcCCccccc
Q 043192 239 LSSLGCNRLLVFVAQLDLLRG 259 (316)
Q Consensus 239 ~~~~~~~P~li~~G~~D~~~~ 259 (316)
+.+-++ |+|++.|..|-+++
T Consensus 208 ln~~~i-kvli~ygg~DhLIE 227 (297)
T PF06342_consen 208 LNKKPI-KVLIAYGGKDHLIE 227 (297)
T ss_pred hccCCC-cEEEEEcCcchhhH
Confidence 344445 99999999999885
No 319
>PF13728 TraF: F plasmid transfer operon protein
Probab=22.08 E-value=3.4e+02 Score=22.23 Aligned_cols=52 Identities=12% Similarity=0.285 Sum_probs=34.6
Q ss_pred CccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhh
Q 043192 67 KLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHED 123 (316)
Q Consensus 67 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d 123 (316)
.+-+++|.-| .+..+....+.+..++.++|+.|+.++.-+.+...++....|
T Consensus 121 ~~gL~~F~~~-----~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~ 172 (215)
T PF13728_consen 121 KYGLFFFYRS-----DCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPD 172 (215)
T ss_pred CeEEEEEEcC-----CCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCC
Confidence 3444444444 344555667888999999999988887666655566665543
No 320
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=22.08 E-value=4.3e+02 Score=24.47 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=22.3
Q ss_pred CCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEeccccc
Q 043192 148 ADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFW 193 (316)
Q Consensus 148 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 193 (316)
++++.|++..-+..+.-.+..+...+ =+++++-.|.+.
T Consensus 118 v~p~~Ivit~G~t~al~~l~~~l~~p--------GD~Vlv~~P~Y~ 155 (447)
T PLN02607 118 FDPDRIVLTAGATAANELLTFILADP--------GDALLVPTPYYP 155 (447)
T ss_pred cCHHHeEEcCChHHHHHHHHHHhCCC--------CCEEEEcCCCCc
Confidence 78889988655555544443333211 256777777664
No 321
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.81 E-value=3.6e+02 Score=20.32 Aligned_cols=79 Identities=10% Similarity=0.063 Sum_probs=49.9
Q ss_pred CCCCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCC
Q 043192 31 ASLDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYR 110 (316)
Q Consensus 31 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r 110 (316)
...++..+..+-.+.+++|=+=+..++-|--.. .- .-+.+-...+.+|+........+...+.++.+..++-+.|+
T Consensus 48 t~edpkkGlkYAAvEvPSGvRGRMsl~gplIee---Ae-AaIIv~~~p~~FGC~GCartnEL~~~lir~k~iPiLel~YP 123 (143)
T PF09885_consen 48 TPEDPKKGLKYAAVEVPSGVRGRMSLIGPLIEE---AE-AAIIVEDAPIAFGCMGCARTNELTKYLIRQKGIPILELKYP 123 (143)
T ss_pred CccchhhccceeEeecCCcccchhhhhhhhHhh---hc-eeeEecCCCccccccccccHHHHHHHHHhhcCCceEEeeCC
Confidence 334566788888888888744444555553211 11 12333444455566555456788889999999999988887
Q ss_pred CCC
Q 043192 111 RAP 113 (316)
Q Consensus 111 ~~~ 113 (316)
...
T Consensus 124 ~~~ 126 (143)
T PF09885_consen 124 TNE 126 (143)
T ss_pred CCh
Confidence 643
No 322
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=21.67 E-value=3e+02 Score=24.10 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=40.8
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhCCC------------Cc------c-cEEEEeCCCcccccccCCCcHHHHHHHH
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKESGW------------KG------D-AKVSEIMGETHVFHLLNPSSLHAIRMLK 304 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~g~------------~~------~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 304 (316)
++||..|..|.+++ -.+.+.++|.-.+. .| + .++..+-++||... . +.+..++
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~-----qP~~al~ 308 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-----RPNETFI 308 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c-----CHHHHHH
Confidence 79999999998775 45666666652220 00 2 56666778999542 2 3467777
Q ss_pred HHHHHHhcC
Q 043192 305 TTVDFIHGK 313 (316)
Q Consensus 305 ~i~~fl~~~ 313 (316)
-+.+||...
T Consensus 309 m~~~fi~~~ 317 (319)
T PLN02213 309 MFQRWISGQ 317 (319)
T ss_pred HHHHHHcCC
Confidence 788888654
No 323
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=21.62 E-value=88 Score=27.31 Aligned_cols=52 Identities=15% Similarity=0.025 Sum_probs=30.3
Q ss_pred EEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhc
Q 043192 247 LLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHG 312 (316)
Q Consensus 247 ~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 312 (316)
-.++.|..+. ..++.+.|++.|+ .++.+-...+-|.-. . +.+.+.+.++++.
T Consensus 158 q~visG~~~~----l~~~~~~l~~~~~--~~~~l~v~~afHs~~-----m---~~~~~~~~~~l~~ 209 (318)
T PF00698_consen 158 QVVISGEREA----LEALVERLKAEGI--KAKRLPVSYAFHSPL-----M---EPAADEFREALES 209 (318)
T ss_dssp EEEEEEEHHH----HHHHHHHHHHTTS--EEEEESSSSETTSGG-----G---HHHHHHHHHHHHT
T ss_pred ccccCCCHHH----HHHHHHHhhccce--eEEEeeeeccccCch-----h---hhhHHHHHhhhhc
Confidence 4555555543 5667888888886 666666666666333 1 3444455555544
No 324
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.59 E-value=3.6e+02 Score=20.25 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=48.3
Q ss_pred CCCCCCCceeeeEEecCCCceEEEEEecCCCCCCCCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCC
Q 043192 32 SLDPTTHVDSKDIIYSSEHNLSARIYFPNNTNRNQKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRR 111 (316)
Q Consensus 32 ~~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~ 111 (316)
..++..+..+-.+.+++|-+=++.++-|--.. .- .-+.+-+..+..|+........+...+.++.+..++-+.|+.
T Consensus 48 ~edpk~GlkYaavEvPSGvRGRmsl~gplIee---Ae-AaIIv~~ap~~FGC~GCartnEL~~~lir~k~iPiLEl~YP~ 123 (142)
T TIGR03271 48 PEDPKKGLKYAAVEVPSGVRGRMSLFGPLIEE---AE-AAIIVREAPFAFGCMGCARTNELTVFLVRRKDIPILELDYPT 123 (142)
T ss_pred ccchhhccceeEeecCccccchhhhhhHHHhh---cc-eeEEecCCCccccccccccHHHHHHHHHhhcCCceEEeeCCC
Confidence 34566788888888888754445555553211 11 123333333444554444566888889999999999998876
Q ss_pred CC
Q 043192 112 AP 113 (316)
Q Consensus 112 ~~ 113 (316)
+.
T Consensus 124 ~~ 125 (142)
T TIGR03271 124 SE 125 (142)
T ss_pred Ch
Confidence 53
No 325
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.29 E-value=62 Score=28.19 Aligned_cols=17 Identities=41% Similarity=0.696 Sum_probs=15.3
Q ss_pred EEEeechHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~ 170 (316)
.++|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78999999999998874
No 326
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=21.26 E-value=5.6e+02 Score=22.44 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=41.8
Q ss_pred cEEEEEcCCccccc--hHHHHHHHHHhCCCCc-ccEEEEeCCCcccccccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 246 RLLVFVAQLDLLRG--RGLYYVTKLKESGWKG-DAKVSEIMGETHVFHLLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 246 P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
-++-+-|+.|.+.- +.+. +..|..+ ++. ..+..+-++.|| +..+. +..-.++..-.|.+|+.+++
T Consensus 341 aL~tvEGEnDDIsgvGQTkA-A~~LC~n-Ipe~mk~hy~qp~vGH-YGVFn-Gsrfr~eIvPri~dFI~~~d 408 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKA-AHDLCSN-IPEDMKQHYMQPDVGH-YGVFN-GSRFREEIVPRIRDFIRRYD 408 (415)
T ss_pred eEEEeecccccccccchhHH-HHHHHhc-ChHHHHHHhcCCCCCc-cceec-cchHHHHHHHHHHHHHHHhC
Confidence 47888999998663 4443 3333322 211 235566799999 55443 34556788889999998875
No 327
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=21.20 E-value=1.3e+02 Score=27.55 Aligned_cols=42 Identities=24% Similarity=0.299 Sum_probs=25.0
Q ss_pred cEEEEEcCCccccchHHHHHHHHHhCCCCcccEEEEeCCCcccccccCC
Q 043192 246 RLLVFVAQLDLLRGRGLYYVTKLKESGWKGDAKVSEIMGETHVFHLLNP 294 (316)
Q Consensus 246 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~ 294 (316)
-+++.+|+.|+-..-+. ...... .+..++++|+.|+..+..+
T Consensus 378 nviFtNG~~DPW~~lgv-----~~~~~~--~~~~~~I~g~~Hc~Dl~~~ 419 (434)
T PF05577_consen 378 NVIFTNGELDPWRALGV-----TSDSSD--SVPAIVIPGGAHCSDLYPP 419 (434)
T ss_dssp SEEEEEETT-CCGGGS-------S-SSS--SEEEEEETT--TTGGGS--
T ss_pred eEEeeCCCCCCcccccC-----CCCCCC--CcccEEECCCeeeccccCC
Confidence 69999999999665441 111222 5566789999999887644
No 328
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=21.13 E-value=2e+02 Score=25.02 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHhcCCCCCcccccccCCCccEEEEeechHHHHHHHHHHHhh
Q 043192 122 EDSWTALKWVASHANGRGPEDWLKTYADFQKVILSGDSAGGNIAHHMGIRQG 173 (316)
Q Consensus 122 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~ 173 (316)
..+..-++|.+...+-- -.|.||-++|.|.|=.+|..+++.+.
T Consensus 22 ~nV~~QI~y~k~~gp~~---------ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 22 ANVLQQIDYVKAAGPIK---------NGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHhcCCcc---------CCCceEEEEecCCcccHHHHHHHHhC
Confidence 45667778888776432 35889999999999999999998875
No 329
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=20.97 E-value=74 Score=17.80 Aligned_cols=13 Identities=8% Similarity=0.325 Sum_probs=10.4
Q ss_pred HHHHHHHhcCCCC
Q 043192 304 KTTVDFIHGKDYP 316 (316)
Q Consensus 304 ~~i~~fl~~~~~~ 316 (316)
+++.+||.+|+++
T Consensus 7 ~~L~~wL~~~gi~ 19 (38)
T PF10281_consen 7 SDLKSWLKSHGIP 19 (38)
T ss_pred HHHHHHHHHcCCC
Confidence 5688999998864
No 330
>cd07049 BMC_EutL_repeat1 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 1. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of the eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 1 (the first BMC domain of EutL).
Probab=20.88 E-value=2.4e+02 Score=20.15 Aligned_cols=47 Identities=21% Similarity=0.259 Sum_probs=31.8
Q ss_pred HHHHhCCCCcccEEE--EeCCCcccc-------c--ccCCCcHHHHHHHHHHHHHHhcCC
Q 043192 266 TKLKESGWKGDAKVS--EIMGETHVF-------H--LLNPSSLHAIRMLKTTVDFIHGKD 314 (316)
Q Consensus 266 ~~l~~~g~~~~~~~~--~~~~~~H~~-------~--~~~~~~~~~~~~~~~i~~fl~~~~ 314 (316)
++.+++.+ ++-+. .|-|++|+. . +..++..+++..++.+++||++..
T Consensus 44 eAtKaa~v--ev~~~~~f~gGa~h~~~~~sG~vi~ii~G~dvsdV~sal~~~l~~l~~~~ 101 (103)
T cd07049 44 EATKAAEV--EVVYARSFYAGAAHASTPLAGEVIGILAGPSPAEVRSGLNAAIDFIENEA 101 (103)
T ss_pred hhhhhcCe--EEEEEeecccccccCccCCCccEEEEEeCCCHHHHHHHHHHHHHHHhccc
Confidence 45555543 33222 367889988 3 234477889999999999998753
No 331
>cd03013 PRX5_like Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 suggests that it may have an important antioxidant role in organelles that are major sources of reactive oxygen species (ROS), as well as a role in the control of signal transduction. PRX5 has been shown to reduce hydrogen peroxide, alkyl hydroperoxides and peroxynitrite. As with all other PRXs, the N-terminal peroxidatic cysteine of PRX5 is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Human PRX5 is able to resolve this intermediate by forming an intramolecular disulfide bond with its C-terminal cysteine (the resolving cysteine), which can then be reduced by TRX, just like an atypical 2-cys PRX. This resolving cysteine, however, is not conserved in other members of the subfamily. In such cases
Probab=20.84 E-value=2.8e+02 Score=21.17 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=25.0
Q ss_pred ccEEEEEcCCcccccCcch--hhhHHHHHHHHHhcCc-EEEee
Q 043192 68 LPLVVYFHGGAFIFENAFS--LTYHAYMNTLVSHAKI-IAVSV 107 (316)
Q Consensus 68 ~p~vv~iHGgg~~~g~~~~--~~~~~~~~~l~~~~g~-~v~~~ 107 (316)
+++||+++.+.|..++... ..+......+ .+.|+ .|+.+
T Consensus 30 k~vvl~fyP~~~tp~Ct~e~~~~~~~~~~~f-~~~g~~~V~~i 71 (155)
T cd03013 30 KKVVIFGVPGAFTPTCSAQHLPGYVENADEL-KAKGVDEVICV 71 (155)
T ss_pred CcEEEEEeCCCCCCCCchhHHHHHHHhHHHH-HHCCCCEEEEE
Confidence 4799999999998887652 1223333444 34487 47766
No 332
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.62 E-value=71 Score=26.92 Aligned_cols=18 Identities=33% Similarity=0.643 Sum_probs=16.3
Q ss_pred EEEeechHHHHHHHHHHH
Q 043192 154 ILSGDSAGGNIAHHMGIR 171 (316)
Q Consensus 154 ~l~G~S~GG~~a~~~a~~ 171 (316)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999876
No 333
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=20.12 E-value=1.6e+02 Score=25.63 Aligned_cols=112 Identities=14% Similarity=0.047 Sum_probs=59.2
Q ss_pred CCccEEEEEcCCcccccCcchhhhHHHHHHHHHhcCcEEEeecCCCCCCCCCCcchhhHHHHHHHHHHhcCCCCCccccc
Q 043192 66 QKLPLVVYFHGGAFIFENAFSLTYHAYMNTLVSHAKIIAVSVDYRRAPEDPVPAAHEDSWTALKWVASHANGRGPEDWLK 145 (316)
Q Consensus 66 ~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 145 (316)
.+.|.|+.+-. ..|--.. ..+.-+..++..++ |...|+--+...+.....-|+.+.++|+.+-...+|
T Consensus 101 ~pdPkvLivap---msGH~aT-LLR~TV~alLp~~~--vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~G------ 168 (415)
T COG4553 101 KPDPKVLIVAP---MSGHYAT-LLRGTVEALLPYHD--VYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLG------ 168 (415)
T ss_pred CCCCeEEEEec---ccccHHH-HHHHHHHHhccccc--eeEeeccccceeecccCCccHHHHHHHHHHHHHHhC------
Confidence 45678887765 2232211 23344455555433 556676655444555556677777777777765554
Q ss_pred ccCCCccEEEEeechHHHHHHHHHHHhhcccccCCccceeEEecccccCC
Q 043192 146 TYADFQKVILSGDSAGGNIAHHMGIRQGQEKLEGINIDGICLLFPYFWGS 195 (316)
Q Consensus 146 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 195 (316)
-|..-+.++--+-=-..|..+.....+ +..+...+++.+.++..
T Consensus 169 --p~~hv~aVCQP~vPvLAAisLM~~~~~----p~~PssMtlmGgPIDaR 212 (415)
T COG4553 169 --PDAHVMAVCQPTVPVLAAISLMEEDGD----PNVPSSMTLMGGPIDAR 212 (415)
T ss_pred --CCCcEEEEecCCchHHHHHHHHHhcCC----CCCCceeeeecCccccc
Confidence 443444444444333333333333222 34567777777765543
No 334
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=20.11 E-value=1.5e+02 Score=25.40 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=17.0
Q ss_pred ccEEEEeechHHHHHHHHHH
Q 043192 151 QKVILSGDSAGGNIAHHMGI 170 (316)
Q Consensus 151 ~~i~l~G~S~GG~~a~~~a~ 170 (316)
....++|||+|=..|+.++.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 56789999999988888764
Done!