BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043195
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Query: 16 YDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDK-LNRGNQISPSLSSAIEGSKISIV 74
YDVFLSFRG D R F SHL L K I+TF DDK L G I L AIE S+ +IV
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERF 134
+FS+ YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS VRNQ + +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 135 KEKIDMLQTWRIAMREAANLSG 156
K+ ++ +Q WRIA+ EAANL G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 102/161 (63%), Gaps = 17/161 (10%)
Query: 1 MASSSSSINMNPQIKYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISP 60
MASSSS+ +YDVF SFRG DVR+NF+SHL K I TF DD + R + I
Sbjct: 1 MASSSSN-----SWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGH 55
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQT 120
L +AI SKIS+V+FS+ YASS WCL+EL++I++ K + G V+PVFY VDPSD+R QT
Sbjct: 56 ELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQT 115
Query: 121 GTIGDSFL-----KLEERFKEKIDMLQTWRIAMREAANLSG 156
G G SFL K EER WR A+ +AAN+ G
Sbjct: 116 GKFGMSFLETCCGKTEER-------QHNWRRALTDAANILG 149
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 96/145 (66%), Gaps = 5/145 (3%)
Query: 15 KYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIV 74
+YDVF SFRG DVR +F+SHL L R K TFIDD++ R I P L SAI+ S+I+IV
Sbjct: 11 RYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDEIERSRSIGPELLSAIKESRIAIV 69
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERF 134
IFSK YASS WCLNELV+I + Q+V+P+F+ VD S+V+ QTG G F EE
Sbjct: 70 IFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVF---EETC 126
Query: 135 KEKI-DMLQTWRIAMREAANLSGFD 158
K K D Q+W+ A+ A ++G+D
Sbjct: 127 KAKSEDEKQSWKQALAAVAVMAGYD 151
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 8 INMNPQIKYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIE 67
I PQ VF++FRG+D+R F+S L AL ++KI FID++ RG + SL I
Sbjct: 18 IPTGPQ----VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIG 72
Query: 68 GSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSF 127
SKI++VIFS+GY S WC++ELVKI E ++ I++P+FY +D V++ TG GD+F
Sbjct: 73 ESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNF 132
Query: 128 LKLEERFKEKIDMLQTWRIAMREAANL 154
L ++++ + L W A+ L
Sbjct: 133 WDLVDKYQPEPKKLHKWTEALFSVCEL 159
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 1 MASSSS--SINMNPQIKYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQI 58
MA+SSS PQ VF++FRG+D+R+ F+S L A+ I FID G +
Sbjct: 1 MAASSSVRPTPTGPQ----VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDL 56
Query: 59 SPSLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRN 118
+L I+ S++++VIFSK Y SS WCL+EL +I + N+ G +P+FY + PS V
Sbjct: 57 V-NLFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLE 115
Query: 119 QTGTIGDSFLKLEERFKEKIDMLQTWRIAMREAANLSGF 157
G GD+F L+E++K + Q W+ A+ L G
Sbjct: 116 LKGGFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGL 154
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 1 MASSSSSINMNPQIKYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISP 60
MASSSS + P VF+ FRG DVR +FIS L AL I FID+ G++++
Sbjct: 1 MASSSSVVKPTP-TGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA- 58
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQT 120
+L + IE S++++VIFS + S CLNEL KI E K++ IV+P+FY V PS V+
Sbjct: 59 NLLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLE 118
Query: 121 GTIGDSFLKLEERFKEKIDMLQTWRIAM 148
G GD+F LE + + + Q W+ A+
Sbjct: 119 GKFGDNFRALERNNRHMLPITQKWKEAL 146
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Query: 15 KYDVFLSFRGRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIV 74
+Y VF++FRG ++R++F+ L A+ +KI F D+ RG ++ L IE S++++
Sbjct: 357 QYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN-YLFRRIEESRVAVA 415
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERF 134
IFS+ Y S WCL+ELVK+ E + +VVPVFY ++ + + G GD+ LE +
Sbjct: 416 IFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEWEY 475
Query: 135 KEKIDMLQTWRIAM 148
+ + + +Q W+ A+
Sbjct: 476 RSEPERIQKWKEAL 489
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 16 YDVFLSFRGRDV-RHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIV 74
YDV + + D+ +FISHL A+LCR+ I + +K N + A+ ++ I+
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNEVD--------ALPKCRVLII 717
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERF 134
+ + Y S L+ ILE ++ ++V P+FY + P D + K ERF
Sbjct: 718 VLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSPYDFVCNS--------KNYERF 764
Query: 135 KEKIDMLQTWRIAMREAANLSGF 157
+ D + W+ A++E + G+
Sbjct: 765 YLQ-DEPKKWQAALKEITQMPGY 786
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 26 DVRHNFISHLNAALCRKKI-ETFID--DKLNRGNQISPSLSSAIEGSKISIVIFSKGYAS 82
+VR++F+SHL+ AL RK + + FID D L+ +Q S +E +++S++I
Sbjct: 15 EVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNESQ------SMVERARVSVMILPGNRTV 68
Query: 83 SRWCLNELVKILESKNKYGQIVVPVFYLVDPSDV 116
S L++LVK+L+ + Q+VVPV Y V S+
Sbjct: 69 S---LDKLVKVLDCQKNKDQVVVPVLYGVRSSET 99
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 22/138 (15%)
Query: 25 RDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIVIFSKGYASSR 84
DV I+ L L K I FID++ RG + +L I+ SKIS+ IFS+ S+
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGLK-NLFKRIQDSKISLAIFSE----SK 105
Query: 85 WCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERFKEKIDMLQTW 144
N+L+K ES ++ +P+FY VD TG + D L+ K K D++ +
Sbjct: 106 CDFNDLLKNNESADE----AIPIFYKVD------ATGDLAD----LQNSVKCKKDLINS- 150
Query: 145 RIAMREAANLSGFDSHGI 162
A+ E + L S G+
Sbjct: 151 --AVEEMSKLLANISVGV 166
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 10 MNPQIKYDVFLSFR---GRDVRHNFISHLNAALCRKKIETFID------DKLNRGNQISP 60
+ P IK D S V H+ +SHL+AAL R+ I F+D K Q P
Sbjct: 8 VTPSIKADCSHSVNIICEETVLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQP 67
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVD 112
+G+++ +V+ S + +K+++ G +VVPVFY VD
Sbjct: 68 ----LTDGARVLVVVISDEVEFYDPWFPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 26 DVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIVIFSKGYASSRW 85
+VR++F+SHL+ AL R+K + ++ + + + IE + +S+++ S
Sbjct: 18 EVRYSFVSHLSEAL-RRKGINNVVVDVDIDDLLFKESQAKIEKAGVSVMVLPGNCDPSEV 76
Query: 86 CLNELVKILES-KNKYGQIVVPVFY 109
L++ K+LE +N Q VV V Y
Sbjct: 77 WLDKFAKVLECQRNNKDQAVVSVLY 101
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2
PE=2 SV=3
Length = 2507
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 24 GRDVRHNFISHLNAALCRKKIETFIDDKLNRGNQISPSLSSAIEGSKISIVIFSKGYASS 83
R H I+H + R I+ FID +L ++S ++SA + SI + + G A+S
Sbjct: 395 ARKWHHIAIAHCYSRWGRSDIKCFIDGQLAETIELSWVVTSATNWDRCSIGVSADGTANS 454
Query: 84 RWC 86
+C
Sbjct: 455 AFC 457
>sp|Q8F9R5|HIS4_LEPIN 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=hisA PE=3 SV=1
Length = 241
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 72 SIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLE 131
++ +F Y + +E K+ ES K G + +LVD + RNQ G DS LK+
Sbjct: 14 AVRLFKGNYEEKKIYSSEPWKLAESFAKNG---ATLLHLVDLNGARNQLGVNEDSILKIR 70
Query: 132 ERFKEKIDMLQTWRIAMREAANLSGFDSHGI 162
E K+ + +R+ L+ +D GI
Sbjct: 71 ETTSLKVQLGG----GIRDKEKLAYYDKIGI 97
>sp|P62354|HIS4_LEPIC 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=hisA PE=3 SV=1
Length = 241
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 72 SIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTIGDSFLKLE 131
++ +F Y + +E K+ ES K G + +LVD + RNQ G DS LK+
Sbjct: 14 AVRLFKGNYEEKKIYSSEPWKLAESFAKNG---ATLLHLVDLNGARNQLGVNEDSILKIR 70
Query: 132 ERFKEKIDMLQTWRIAMREAANLSGFDSHGI 162
E K+ + +R+ L+ +D GI
Sbjct: 71 ETTSLKVQLGG----GIRDKEKLAYYDKIGI 97
>sp|P39336|YJGL_ECOLI Uncharacterized protein YjgL OS=Escherichia coli (strain K12)
GN=yjgL PE=4 SV=2
Length = 604
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 128 LKLEERFKEKIDMLQTWRIAMREAANLSG 156
+ L + FK+K ++L TWR+ M + A ++G
Sbjct: 13 ITLADNFKQKSEVLNTWRVGMNDFARIAG 41
>sp|Q47GH9|SYS_DECAR Serine--tRNA ligase OS=Dechloromonas aromatica (strain RCB) GN=serS
PE=3 SV=1
Length = 427
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 41 RKKIETFIDDKLNRGNQISPSLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKY 100
R ++ + RG I S SA+E + ++ ++ + R L++ + +L+ K +
Sbjct: 8 RSNLDAVAEGLAKRGKPIDFSEFSALEAERKTLQTRTQDLQAQRNSLSKQIGMLKGKGE- 66
Query: 101 GQIVVPVFYLVDPSDVRNQTGTIGDSFLKLEERFKE 136
D S+V Q G+IGD E R E
Sbjct: 67 -----------DASEVMAQVGSIGDELKASEARLAE 91
>sp|Q9JLF7|TLR5_MOUSE Toll-like receptor 5 OS=Mus musculus GN=Tlr5 PE=2 SV=1
Length = 859
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 15 KYDVFLSFRGRD---VRHNFISHLNAALC-RKKIETFIDDK--LNRGNQISPSLSSAIEG 68
+YD + F +D ++ + HL+A R ++ +++ + N IS ++ +A+ G
Sbjct: 693 RYDAYFCFSSKDFEWAQNALLKHLDAHYSSRNRLRLCFEERDFIPGENHIS-NIQAAVWG 751
Query: 69 SKISIVIFSKGYASSRWCL 87
S+ ++ + S+ + WCL
Sbjct: 752 SRKTVCLVSRHFLKDGWCL 770
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,050,311
Number of Sequences: 539616
Number of extensions: 2092191
Number of successful extensions: 5067
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5042
Number of HSP's gapped (non-prelim): 27
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)