Query 043196
Match_columns 227
No_of_seqs 135 out of 684
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 03:37:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z3q_A Thaumatin-like protein; 100.0 3.1E-87 1E-91 571.1 13.3 200 20-220 1-200 (200)
2 1aun_A PR-5D; antifungal prote 100.0 1.8E-86 6E-91 569.7 13.5 203 19-222 1-208 (208)
3 1du5_A Zeamatin; beta sandwich 100.0 3.5E-85 1.2E-89 560.9 11.2 201 20-220 1-206 (206)
4 2vhk_A Thaumatin-I; kinetics o 100.0 1.7E-84 5.8E-89 556.3 14.3 199 20-221 1-206 (206)
5 2ahn_A Thaumatin-like protein; 100.0 2.4E-82 8.2E-87 549.2 13.1 199 20-220 1-222 (222)
6 3g7m_A Xylanase inhibitor TL-X 100.0 3.2E-55 1.1E-59 359.0 12.2 143 20-220 1-151 (151)
7 3gd0_A Laminaripentaose-produc 93.6 0.26 8.9E-06 45.2 8.8 102 17-130 4-146 (367)
8 3gd0_A Laminaripentaose-produc 68.7 5.3 0.00018 36.5 4.7 41 180-220 320-365 (367)
9 4aor_D Trypsin inhibitor 3; hy 66.3 1.9 6.4E-05 26.3 0.8 17 163-180 11-27 (37)
10 2hrv_A 2A cysteine proteinase; 37.7 10 0.00035 30.1 1.0 18 75-92 97-114 (142)
11 3qbt_B Inositol polyphosphate 37.2 38 0.0013 26.0 4.3 36 18-54 45-96 (140)
12 1z8r_A Coxsackievirus B4 polyp 34.1 12 0.00041 30.5 0.8 18 75-92 117-134 (166)
13 4ep8_B Urease subunit beta; al 33.3 50 0.0017 24.7 4.1 49 17-66 19-93 (101)
14 4ubp_B Protein (urease (chain 25.7 86 0.0029 24.3 4.4 50 17-67 25-100 (126)
15 4ac7_B Urease subunit beta; hy 25.7 86 0.0029 24.3 4.4 50 17-67 25-100 (126)
16 4ajy_V VON hippel-lindau disea 24.2 91 0.0031 25.1 4.5 36 18-53 20-60 (163)
17 1lm8_V VHL, VON hippel-lindau 22.7 1.1E+02 0.0036 24.6 4.6 36 18-53 17-57 (160)
No 1
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=3.1e-87 Score=571.07 Aligned_cols=200 Identities=65% Similarity=1.355 Sum_probs=195.3
Q ss_pred eEEEEEeCCCCceeceeeCCCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCCcc
Q 043196 20 TKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPST 99 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~paT 99 (227)
++|||+|+|+||||||++|++||+|+|||++++.+|++|++|||||||||+||++|+++|+||||+|.++|++.|.||+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT 80 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT 80 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence 58999999999999999999999999999999999999977999999999999999999999999999999998899999
Q ss_pred eeeeeeccCCCCcceeccccCCcCCceeeeeCCCCccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCCCCCCC
Q 043196 100 LAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCG 179 (227)
Q Consensus 100 laEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~g~~C~ 179 (227)
||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||..||.|||+++||+|||++|++|||||+|++|+
T Consensus 81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~ 159 (200)
T 1z3q_A 81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS 159 (200)
T ss_dssp EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred eEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence 999999987789999999999999999999998889 9999999999999999999999999999999999999999999
Q ss_pred CchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeC
Q 043196 180 PTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220 (227)
Q Consensus 180 pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP 220 (227)
|++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999999999999999999988999999998
No 2
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=1.8e-86 Score=569.66 Aligned_cols=203 Identities=62% Similarity=1.277 Sum_probs=195.7
Q ss_pred ceEEEEEeCCCCceeceeeC-CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCC
Q 043196 19 ATKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAP 97 (227)
Q Consensus 19 a~t~tv~N~C~~tVw~g~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~p 97 (227)
+++|||+|+|+|||||+++| ++||+|+|||++++.+|++|++|||||||+|+||++|+++|+||||+|.|+|++.|.||
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pP 80 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP 80 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred CcEEEEEeCCCCCcCCeEecCCCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcCceeecCCCCCCC
Confidence 46999999999999999999 78999999999999999999779999999999999999999999999999999988999
Q ss_pred cceeeeeeccCCCCcceeccccCCcCCceeeeeCC---CCccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCC
Q 043196 98 STLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLS---PSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCN 174 (227)
Q Consensus 98 aTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~---g~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~ 174 (227)
+|||||+|++.+++|||||||||||||||+|+|++ +.| +.++|.+|||..||.|||+++||+|||++|++|||||+
T Consensus 81 aTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C-~~~~C~~dln~~CP~~L~v~~~C~saC~af~~~~yCC~ 159 (208)
T 1aun_A 81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT 159 (208)
T ss_dssp CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCT
T ss_pred cceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCC-CcccccCcchhhCCHHHcccccccCHhhhcCCCccccc
Confidence 99999999987789999999999999999999984 579 99999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHhhhCCCcccCCCCCCCCeeecCC-CCceEEEeeCCC
Q 043196 175 SGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPS-GTDYKVVFCPSL 222 (227)
Q Consensus 175 g~~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~-~~~y~VtFCP~~ 222 (227)
|++|+|++||++||++||+||+|||||++|+|+|++ +++|+|||||.+
T Consensus 160 g~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~g 208 (208)
T 1aun_A 160 QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred CCCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCCC
Confidence 999999999999999999999999999999999998 889999999975
No 3
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=3.5e-85 Score=560.89 Aligned_cols=201 Identities=63% Similarity=1.277 Sum_probs=193.4
Q ss_pred eEEEEEeCCCCceeceeeC-CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCCc
Q 043196 20 TKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPS 98 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~pa 98 (227)
++|||+|+|+||||||++| ++||+|+|||++++.+|++||+|||||||+|+||++|+++|+||||+|.++|++.|.||+
T Consensus 1 ~tfti~N~C~~tVWp~~~p~~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPa 80 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPN 80 (206)
T ss_dssp CEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCCSCCCSSC
T ss_pred CEEEEEeCCCCCcCCeEecCCCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCCCeeecCCCCCCcc
Confidence 5899999999999999999 789999999999999999944899999999999999999999999999999999889999
Q ss_pred ceeeeeeccCCCCcceeccccCCcCCceeeeeCCC-CccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCCCC-
Q 043196 99 TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSP-SCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSG- 176 (227)
Q Consensus 99 TlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g-~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~g~- 176 (227)
|||||+|++.+++|||||||||||||||+|+|+++ .|.+.++|.+|||..||.|||+++||+|+|++|++|||||+|+
T Consensus 81 TLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~C~~~~~C~~dln~~CP~~L~v~~gC~saC~~f~~~~yCC~g~~ 160 (206)
T 1du5_A 81 TLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSA 160 (206)
T ss_dssp CEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSSSCCCCCEECSCTTTTCCGGGEETTEECCHHHHHCCHHHHCCGGG
T ss_pred eeeEEEeccCCCCceeeeeeecccccCEEEecCCCCCCcCCCcccccchhhCCHHHhhccccCChhhccCCCcccccCCC
Confidence 99999999877899999999999999999999876 7878899999999999999999999999999999999999997
Q ss_pred --CCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeC
Q 043196 177 --NCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220 (227)
Q Consensus 177 --~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP 220 (227)
+|+|++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 161 ~~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 161 ANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp GGGCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred CCcCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999998999999998
No 4
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=1.7e-84 Score=556.35 Aligned_cols=199 Identities=56% Similarity=1.240 Sum_probs=190.9
Q ss_pred eEEEEEeCCCCceeceee------CCCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCC
Q 043196 20 TKFNITNNCPNTVWAAAV------PGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGY 93 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~------p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~ 93 (227)
++|||+|+|+||||||++ |++||+|+|||++++.+|++||+|||||||+|+||+.|+++|+||||+|.|+|++.
T Consensus 1 ~tfti~N~C~~tVWp~~~~g~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~ 80 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF 80 (206)
T ss_dssp CEEEEEECSSSCEEEEEECSSSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCTTBSSCSSC
T ss_pred CEEEEEeCCCCCcCCEEcCCCCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCCceeecCCC
Confidence 589999999999999997 56899999999999999999448999999999999999999999999999999998
Q ss_pred CCCCcceeeeeeccCCCCcceeccccCCcCCceeeeeCCCCccCCccCcccccCCCCCCCcCCC-CccCCccccCCCCcC
Q 043196 94 GTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPG-GCNGPCHVFKTDKYC 172 (227)
Q Consensus 94 g~~paTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g~C~~~~~C~~dl~~~CP~~l~~~~-gC~S~C~~~~~~~~C 172 (227)
|.||+|||||+|++.++ |||||||||||||||+|+|+++.| +..+|.+|||..||.|||+++ ||+|+|++|++||||
T Consensus 81 g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g~C-~~~~C~~dln~~CP~eL~v~~~~C~saC~af~~~~yC 158 (206)
T 2vhk_A 81 GRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYC 158 (206)
T ss_dssp CCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSSSC-CCEEECSCHHHHCCGGGBCTTSSBCCHHHHHCCHHHH
T ss_pred CCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCCCC-CccccccchhhhCCHHHeeccccccChhhccCCCccc
Confidence 89999999999997656 999999999999999999998889 999999999999999999987 999999999999999
Q ss_pred CCCCCCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeCC
Q 043196 173 CNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPS 221 (227)
Q Consensus 173 C~g~~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP~ 221 (227)
|+|++|+|++||++||++||+||+|||||+++ |+|+++++|+|||||.
T Consensus 159 C~g~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 159 CTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp TTTSCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred ccCCCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 99999999999999999999999999999999 9999889999999994
No 5
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=2.4e-82 Score=549.19 Aligned_cols=199 Identities=40% Similarity=0.858 Sum_probs=189.9
Q ss_pred eEEEEEeCCCCceeceeeC--------CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCC-Cceee
Q 043196 20 TKFNITNNCPNTVWAAAVP--------GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCN-GLLEC 90 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~p--------~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCg-g~~~C 90 (227)
++|||+|+|+|||||+++| ++||+|+|||++++.+|++| +|||||||+|+||++|+++|+||||+ |.|+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~W-sGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C 79 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPW-NGRFWARTGCSTDASGKFVCATADCASGQVMC 79 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSE-EEEEEEEEEEEECTTSCEEEEESCCCSSSSSC
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCc-ceeEEeccccCCCCCCCcccccCCccCCceec
Confidence 5899999999999999974 57999999999999999999 89999999999999999999999999 99999
Q ss_pred cC-CCCCCcceeeeeeccCCCCcceeccccCCcCCceeeeeCC--CCccCCccCcccccCCCCCCCcCC---C---CccC
Q 043196 91 QG-YGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLS--PSCNRVIKCTANILGECPNELKVP---G---GCNG 161 (227)
Q Consensus 91 ~~-~g~~paTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~--g~C~~~~~C~~dl~~~CP~~l~~~---~---gC~S 161 (227)
++ .+.||+|||||+|++.+++|||||||||||||||+|+|++ +.| +..+|.+|||..||.|||++ + ||+|
T Consensus 80 ~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C-~~~~C~~dln~~CP~eL~v~~~~G~~v~C~s 158 (222)
T 2ahn_A 80 NGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDC-KTASCPANVNAVCPSELQKKGSDGSVVACLS 158 (222)
T ss_dssp TTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCC-CCEEECSCGGGGCCGGGEEECTTSCEEEECC
T ss_pred CCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCc-ccCcccCchhhhCCHHHeeecCCCcEecccc
Confidence 99 5699999999999987789999999999999999999987 579 99999999999999999985 2 7999
Q ss_pred CccccCCCCcCCCCC-----CCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeC
Q 043196 162 PCHVFKTDKYCCNSG-----NCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220 (227)
Q Consensus 162 ~C~~~~~~~~CC~g~-----~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP 220 (227)
+|++|++|||||+|+ +|+|++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 159 aC~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 159 ACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred cccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 999999999999997 99999999999999999999999999999999998899999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=3.2e-55 Score=358.98 Aligned_cols=143 Identities=37% Similarity=0.792 Sum_probs=129.9
Q ss_pred eEEEEEeCCCCceeceee----C-CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCC-CCceeecCC
Q 043196 20 TKFNITNNCPNTVWAAAV----P-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDC-NGLLECQGY 93 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~----p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdC-gg~~~C~~~ 93 (227)
++|||+|||+||||||++ | ++||+|+|||++++.+|++| +|||||||+|+||++|+++|+|||| +|.++|++.
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~~p~~gG~~L~~g~s~~~~~p~~w-sGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~~~ 79 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVLAQGGGGTELHPGASWSLDTPVIG-SQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCGGN 79 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETTSSCCEECCBCTTCEEEECCCSSE-EEEEEEEESCEECSSCCEECSBSCSSTTSCCSCSC
T ss_pred CEEEEEeCCCCCccCeeccCCCCCCCCeEcCCCCeEEEECCCCC-cceeecccCCCCCCCCCcccccCCccCCcccccCC
Confidence 479999999999999998 6 68999999999999999999 7999999999999999999999999 799999998
Q ss_pred CCCCcceeeeeeccCCCCcceecccc-CCcCCceeeeeCCCCccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcC
Q 043196 94 GTAPSTLAEYALKQFNDMDFIDMSNI-DGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYC 172 (227)
Q Consensus 94 g~~paTlaEftl~~~~~~d~YDvSlV-dGfNlP~~i~P~~g~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~C 172 (227)
|.||+|||||+|+ +++|||||||| |||||||+|+|+++ ....|.
T Consensus 80 g~pPaTlaEftl~--~~~d~YDVSlV~dG~NlP~~i~P~~g---~~~~C~------------------------------ 124 (151)
T 3g7m_A 80 PAVPTTMAEVSVL--QGNYTYGVTSTLKGFNVPMNLKCSSG---DALPCR------------------------------ 124 (151)
T ss_dssp CCSSCCEEEEEEC--SSEEEEEEESSSSCCSSCEEEEESSS---CCEEEC------------------------------
T ss_pred CCCCceeEEEEcc--CCCceEEEEeccCCCCCCeEEEeCCC---CcCcCC------------------------------
Confidence 8999999999998 37999999999 99999999999875 223443
Q ss_pred CCCCCCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCc-eEEEeeC
Q 043196 173 CNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTD-YKVVFCP 220 (227)
Q Consensus 173 C~g~~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~-y~VtFCP 220 (227)
+..||+||.|+ +.|+...+ |+|||||
T Consensus 125 ---------------~~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 125 ---------------KAGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp ---------------STTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred ---------------CCCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 24699999888 79999887 9999998
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=93.62 E-value=0.26 Score=45.15 Aligned_cols=102 Identities=20% Similarity=0.215 Sum_probs=61.9
Q ss_pred ccceEEEEEeCCCC--ceeceee---C----------------------------CCceeec-CCCcEEEEcCCCCceee
Q 043196 17 AHATKFNITNNCPN--TVWAAAV---P----------------------------GGGRKLD-NGQTWTITAEPGTTRAR 62 (227)
Q Consensus 17 a~a~t~tv~N~C~~--tVw~g~~---p----------------------------~~g~~L~-~G~s~s~~~p~~w~sGr 62 (227)
...-.|+|+||=.. .||..++ + +-.+.|. +|++.++.+|. . +||
T Consensus 4 ~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~-sGR 81 (367)
T 3gd0_A 4 PATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-F-SGR 81 (367)
T ss_dssp CSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-E-EEE
T ss_pred CCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-c-Cce
Confidence 34568999999974 5886642 1 0124453 57888999998 6 899
Q ss_pred eeeecccccCCCCCccccCCCCCCceeecCC---CCCC----cceeeeeeccCCCCcceeccccCCcCCceeeee
Q 043196 63 IWARTNCQFDASGKGKCETGDCNGLLECQGY---GTAP----STLAEYALKQFNDMDFIDMSNIDGFNVPMEFSS 130 (227)
Q Consensus 63 iw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~---g~~p----aTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P 130 (227)
||=..|= .=.|.=..| | +.-... .-|- -.-+|||++. ..-|-++|.||-|.+||.|+-
T Consensus 82 IyfS~g~----~L~f~~~~~---g-lv~Ps~~NpsDPN~~~~~~f~EfT~n~--~gl~~N~S~VD~~~~Pl~l~l 146 (367)
T 3gd0_A 82 IYFSYGR----KMEFRLTTG---G-LVQPAVQNPTDPNRDILFNWSEYTLND--SGLWINSTQVDMFSAPYTVGV 146 (367)
T ss_dssp EEEEESS----CCCCEEETT---E-ECCCCTTSTTCTTTTSCEEEEEEEEET--TEEEEECCCSSEECSCEEEEE
T ss_pred EEEEcCC----ccEEEecCC---C-ccCCCCCCCCCCCCCceeeEEEEEecC--cceecccceeccccCceEEEE
Confidence 9944331 001211111 1 110110 0111 2347999994 467889999999999999863
No 8
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=68.67 E-value=5.3 Score=36.47 Aligned_cols=41 Identities=15% Similarity=0.322 Sum_probs=30.9
Q ss_pred CchhhHHHhhhCC--CcccCCCCCC---CCeeecCCCCceEEEeeC
Q 043196 180 PTNFSRFFKERCP--DVYSYPKDDA---TSVFTCPSGTDYKVVFCP 220 (227)
Q Consensus 180 pt~ys~~fK~~CP--~AYsya~DD~---ts~~tC~~~~~y~VtFCP 220 (227)
.+.|++++++.=. .||.|||||- +++..-.....++||+-|
T Consensus 320 tNhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 320 TNHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp SCHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred ccHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 3579999999855 6899999984 345555555778888855
No 9
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=66.35 E-value=1.9 Score=26.27 Aligned_cols=17 Identities=35% Similarity=1.046 Sum_probs=13.6
Q ss_pred ccccCCCCcCCCCCCCCC
Q 043196 163 CHVFKTDKYCCNSGNCGP 180 (227)
Q Consensus 163 C~~~~~~~~CC~g~~C~p 180 (227)
|..|+.++|||+|. |.|
T Consensus 11 c~~f~~p~~ccsg~-cvp 27 (37)
T 4aor_D 11 CSGFGPPEQCCSGA-CVP 27 (37)
T ss_dssp ECTTSCGGGBTTSC-EEE
T ss_pred cCCCCCcccccccc-ccC
Confidence 66789999999995 544
No 10
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=37.74 E-value=10 Score=30.13 Aligned_cols=18 Identities=56% Similarity=1.285 Sum_probs=15.5
Q ss_pred CCccccCCCCCCceeecC
Q 043196 75 GKGKCETGDCNGLLECQG 92 (227)
Q Consensus 75 g~~~C~TGdCgg~~~C~~ 92 (227)
|.+.|+-|||||.|.|..
T Consensus 97 g~G~~epGDCGG~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCGGKLLCKH 114 (142)
T ss_dssp EECCCCTTCTTCEEEETT
T ss_pred EEcCCCCCCCCceeeeCC
Confidence 446899999999999984
No 11
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=37.19 E-value=38 Score=26.04 Aligned_cols=36 Identities=28% Similarity=0.275 Sum_probs=24.9
Q ss_pred cceEEEEEeCCCCceece----------------eeCCCceeecCCCcEEEEc
Q 043196 18 HATKFNITNNCPNTVWAA----------------AVPGGGRKLDNGQTWTITA 54 (227)
Q Consensus 18 ~a~t~tv~N~C~~tVw~g----------------~~p~~g~~L~~G~s~s~~~ 54 (227)
..++|+|.|....+.--. +.|. --.|.||++..+.+
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~-~G~L~Pge~~~I~v 96 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPF-EGYLEPNETVDISL 96 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESC-EEEECTTCEEEEEE
T ss_pred eeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCc-ccccCCCCeeEEEE
Confidence 368999999888776222 2332 34788999887776
No 12
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=34.08 E-value=12 Score=30.50 Aligned_cols=18 Identities=39% Similarity=0.842 Sum_probs=15.6
Q ss_pred CCccccCCCCCCceeecC
Q 043196 75 GKGKCETGDCNGLLECQG 92 (227)
Q Consensus 75 g~~~C~TGdCgg~~~C~~ 92 (227)
|.+.|+-|||||.|.|..
T Consensus 117 ~~G~~epGDCGG~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAGGILRCEH 134 (166)
T ss_dssp EECSSSCCCCBSEEECSS
T ss_pred EecCCCCCCCCceeeeCC
Confidence 457899999999999984
No 13
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=33.26 E-value=50 Score=24.69 Aligned_cols=49 Identities=10% Similarity=0.232 Sum_probs=34.7
Q ss_pred ccceEEEEEeCCCCceeceee------------------------C-CCceeecCCCcEEEEcCC-CCceeeeeee
Q 043196 17 AHATKFNITNNCPNTVWAAAV------------------------P-GGGRKLDNGQTWTITAEP-GTTRARIWAR 66 (227)
Q Consensus 17 a~a~t~tv~N~C~~tVw~g~~------------------------p-~~g~~L~~G~s~s~~~p~-~w~sGriw~R 66 (227)
-...+++|.|.-.-+|.+|.+ | ++....+||+++++.+-+ += ..+|+|-
T Consensus 19 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~~~G-~r~v~Gf 93 (101)
T 4ep8_B 19 RATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVAFAG-HRAVFGF 93 (101)
T ss_dssp CCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEECCT-TCEECST
T ss_pred CCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEEccC-ceEEEcC
Confidence 356899999999999999952 2 345677899999887633 22 3456544
No 14
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=25.72 E-value=86 Score=24.29 Aligned_cols=50 Identities=12% Similarity=0.333 Sum_probs=34.9
Q ss_pred ccceEEEEEeCCCCceeceee------------------------C-CCceeecCCCcEEEEcCC-CCceeeeeeec
Q 043196 17 AHATKFNITNNCPNTVWAAAV------------------------P-GGGRKLDNGQTWTITAEP-GTTRARIWART 67 (227)
Q Consensus 17 a~a~t~tv~N~C~~tVw~g~~------------------------p-~~g~~L~~G~s~s~~~p~-~w~sGriw~Rt 67 (227)
-...+|+|+|.=.-+|.+|.+ | ++....+||+++++.+-+ += ..+|+|-.
T Consensus 25 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~~G-~r~v~G~~ 100 (126)
T 4ubp_B 25 REKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTELGG-NREVFGIS 100 (126)
T ss_dssp SCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEECCT-TCEECSTT
T ss_pred CcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEccC-CeEEeCcC
Confidence 346799999999999999952 2 345677899999887633 22 24555443
No 15
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=25.72 E-value=86 Score=24.29 Aligned_cols=50 Identities=12% Similarity=0.333 Sum_probs=34.9
Q ss_pred ccceEEEEEeCCCCceeceee------------------------C-CCceeecCCCcEEEEcCC-CCceeeeeeec
Q 043196 17 AHATKFNITNNCPNTVWAAAV------------------------P-GGGRKLDNGQTWTITAEP-GTTRARIWART 67 (227)
Q Consensus 17 a~a~t~tv~N~C~~tVw~g~~------------------------p-~~g~~L~~G~s~s~~~p~-~w~sGriw~Rt 67 (227)
-...+|+|+|.=.-+|.+|.+ | ++....+||+++++.+-+ += ..+|+|-.
T Consensus 25 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~~G-~r~v~G~~ 100 (126)
T 4ac7_B 25 REKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTELGG-NREVFGIS 100 (126)
T ss_dssp SCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEECCT-TCEECSTT
T ss_pred CcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEccC-CeEEeCcC
Confidence 346799999999999999952 2 345677899999887633 22 24555443
No 16
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=24.20 E-value=91 Score=25.14 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=27.4
Q ss_pred cceEEEEEeCCCCceeceeeCCCc-----eeecCCCcEEEE
Q 043196 18 HATKFNITNNCPNTVWAAAVPGGG-----RKLDNGQTWTIT 53 (227)
Q Consensus 18 ~a~t~tv~N~C~~tVw~g~~p~~g-----~~L~~G~s~s~~ 53 (227)
....++|+|+++.+|-+-++--.| ..|+||+.+.+.
T Consensus 20 ~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y~tL~PG~~~~~~ 60 (163)
T 4ajy_V 20 EPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 60 (163)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCeEEec
Confidence 467899999999999777653112 479999988774
No 17
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=22.69 E-value=1.1e+02 Score=24.64 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=27.2
Q ss_pred cceEEEEEeCCCCceeceeeC-CCc----eeecCCCcEEEE
Q 043196 18 HATKFNITNNCPNTVWAAAVP-GGG----RKLDNGQTWTIT 53 (227)
Q Consensus 18 ~a~t~tv~N~C~~tVw~g~~p-~~g----~~L~~G~s~s~~ 53 (227)
....|+|+|+.+.+|-+-++- .|. ..|+||+.+.+.
T Consensus 17 ~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y~~L~PG~~~~q~ 57 (160)
T 1lm8_V 17 EPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 57 (160)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCEEeCC
Confidence 468999999999999777653 221 359999988774
Done!