BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043204
(504 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224064366|ref|XP_002301440.1| predicted protein [Populus trichocarpa]
gi|222843166|gb|EEE80713.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/502 (72%), Positives = 429/502 (85%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS+RWPRLLTPT LSQI++ QK+PLTAL+IFK+AK+KYP+Y HNGPVYA+MI IL S+R
Sbjct: 1 MSIRWPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
I EMKEVIDQM+ DSCECKDSVF TAI+TYA AGQ++EAVSLFKN+ +FNCVNWT+SFNT
Sbjct: 61 IAEMKEVIDQMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ +VKESKLE AH FL + GWEVKSRI++LNLL+DVLCQ RSDLAL +FQEMD+Q
Sbjct: 121 LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GCYP+R+SY ILM+GLC D RLNEATHLLYSMFWRISQKGSGEDIV+YRTLL ALCD G+
Sbjct: 181 GCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQ 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++AM+IL KILRKGLKAPK RHR+DL CN+ EDIE K LINEALIRGG+PSLASY+
Sbjct: 241 VEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYT 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
AMA+DLY EG+ + DKVLDE + +G+ PSL YEAK+ AL + G EA+ VIE EMV+
Sbjct: 301 AMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAINVIEREMVE 360
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
VP VR+YN+LLKGLCDAGNSA+AV YLK+M+KQVGCVAN ETYGILVDGLCRDGRF+
Sbjct: 361 RNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRFV 420
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EAS+VLEEMLI+SYWP +TYN+LIRGL S+G+QYEAV+WLEEM+SQ KLP++ VW SLV
Sbjct: 421 EASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLPELYVWRSLV 480
Query: 481 ASVCCNTADLNVCRKTLEQLSS 502
SVCCN ++V +T QL S
Sbjct: 481 TSVCCNMVAVDVSCETFNQLIS 502
>gi|255548031|ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545552|gb|EEF47056.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/504 (72%), Positives = 428/504 (84%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
M+VRWPRLLTPT+LSQII+ QK+PL AL+IFKEAK+KYPNYRHNGPVYA+MIGIL S R
Sbjct: 1 MTVRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
ITEMKEV+DQM+ DSCECKDS+FA AI+TYAR G LNEA+SLFKN+ QFNCVNWT+SFNT
Sbjct: 61 ITEMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ MVKESKLEAAH LFL S YGWEVKSR++SLNLLMDVLCQ RSD+AL VFQEM++Q
Sbjct: 121 LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GCYPDR+SY I+M GLC D RLNEATHLLYSMFWRISQKGSGEDIVIYR L ALCD G
Sbjct: 181 GCYPDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGM 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
++ A+++L KILRKGLKAPK R+DL CN +IE K LINEALIRG IPSL+SY+
Sbjct: 241 VEQALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYT 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
AMA+D Y EG++ + DKVLDE + +GF PSL+ YEAK+AAL K+G V EA+ V+E EMV+
Sbjct: 301 AMAVDFYAEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVE 360
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G VP VR+YNILLKGLCDA NSA AV YLK+M+KQ GCVAN ETY ILV GLC+DG F+
Sbjct: 361 GNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCVANKETYCILVHGLCQDGGFI 420
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EASR+LEEMLI+SYWP V+T+N+LIRGLCSIG+QYEA MWLEEMIS + P++SVW+SLV
Sbjct: 421 EASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLEEMISLDEAPELSVWNSLV 480
Query: 481 ASVCCNTADLNVCRKTLEQLSSCS 504
+C NTAD++ C +T ++LS+CS
Sbjct: 481 TCLCSNTADIDACCETFKRLSNCS 504
>gi|225466731|ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Vitis vinifera]
Length = 503
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/502 (70%), Positives = 413/502 (82%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MSV+WPR L PT LSQ+I+ QK+PLTALKIF EAK K+PNYRHNGPVYA+MI +L S R
Sbjct: 1 MSVKWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
I EM+EVIDQMK DSCECKDSVF++ ++TYARAG ++EAVSLFK L QFNCVNWT SFNT
Sbjct: 61 IAEMREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ +VKESKLE A LFL GWEVKSRI SLNLLMD LCQ RSDLALHVFQEM +Q
Sbjct: 121 LLRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD+ESY ILM+GLC D RLNEATHLLYSMFWRISQKG GEDI YRTLL ALCD G
Sbjct: 181 CCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGH 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A++IL K+L+KGLKAPK R +DL C +GEDIE K LINEALIRGG+PS+ASYS
Sbjct: 241 VEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYS 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
AMAIDLY+E +I E ++VLDEMR +GF PSL +YEAK+AAL + G V+EA++VI+EEMV+
Sbjct: 301 AMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVE 360
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+ VPTVR+YNI+LKGLC G SA AV YL+KM++QVGCVA+ ETY ILVDGLC DGRF+
Sbjct: 361 DSCVPTVRLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFV 420
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EAS +LE MLIRS P VETYN LIRGLC +G+QY+AV+WLEEM+ Q KLP +SVW SLV
Sbjct: 421 EASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDSLV 480
Query: 481 ASVCCNTADLNVCRKTLEQLSS 502
ASVC N + VC +TLE+L S
Sbjct: 481 ASVCSNMTEAGVCSETLEKLWS 502
>gi|356531124|ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Glycine max]
Length = 502
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/502 (64%), Positives = 409/502 (81%), Gaps = 1/502 (0%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS+RWPR+LTPTYLSQIIK QK+PL AL IF EAK +YPNY HNGPVYA+MI IL S R
Sbjct: 1 MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ EM++VI+QMK DSCECKDSVF + I+TYA AG ++EA+SL+K++ +FNCVNWT+SFNT
Sbjct: 61 LNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+L+ MVKE++LE AH LF+ S GWEV+S +++LNLLM LCQ RSDLAL +FQEMD+Q
Sbjct: 121 MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
CYP+R+SY ILMKGLC DRRL+EATHLLYSMFWRISQKG+GEDIV+YRTLL ALCD GK
Sbjct: 181 SCYPNRDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGK 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
++A +IL KILRKGLKAPK R+DL +DG+DIE AK +I+EALI+G +PSLASY+
Sbjct: 241 FEEAEEILGKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYN 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
AMA+DLY+EG+I E DKV+ EM+ +GF P+ ++EAK+AAL K VDEA++VIEE+MVK
Sbjct: 301 AMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMVK 360
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+PT +VYNILLK LC+ GNS + L KMS +VGC + +TY IL++ LC + R+L
Sbjct: 361 VNCLPTAKVYNILLKNLCNVGNSTAILESLNKMSSKVGCTGDRDTYSILLEMLCGERRYL 420
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EAS++LE+M I+SYWPC +YN LIRGLCSIG+QYEAVMWLE+MISQ KLP+ISVW+SL
Sbjct: 421 EASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYEAVMWLEDMISQGKLPEISVWNSL- 479
Query: 481 ASVCCNTADLNVCRKTLEQLSS 502
AS+ CN+ + V +T +L S
Sbjct: 480 ASLFCNSEKIKVSSETFSRLRS 501
>gi|357488057|ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515651|gb|AES97274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 504
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/502 (63%), Positives = 401/502 (79%), Gaps = 1/502 (0%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS+RWPR+L PTYL+QII+ QK+PL AL+IF EAK KYP Y HNGPVYA+MI IL S R
Sbjct: 3 MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGR 62
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ EM ++I+QMK DSCECKDSVF +AI+TYA+ G ++EA+SL+KN+ QFNCVNWTQSFNT
Sbjct: 63 LKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNT 122
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ MV E+KLE AH LF+ S GWEVKSR+Q+LNLLM LC+ RSDLAL +FQEMD+Q
Sbjct: 123 LLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQ 182
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GCYP+RESY I+MKGLC D+RL+EATHLLYSMFWRIS KG+GEDIVIYRTLL ALCD GK
Sbjct: 183 GCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGK 242
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+A++IL KILRKGLKAPK +R+D+ C DG+D E K I+EAL+RG +PS ASY+
Sbjct: 243 FDEAVEILGKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVPSTASYT 302
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+MA+DLY EG+I E DKV+ EM+ + F P ++EAK+AAL K G VDEA++VIEE+MV+
Sbjct: 303 SMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 362
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+P VY ILLK L GNS + L KMSK+V C+A+ ETY IL++ LCR+ ++L
Sbjct: 363 VNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCRERKYL 422
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EAS++LE+M I+SYWPC TYN+LI GLCS+G+QYEAVMWLE+MISQ KLP+ISVW+SL
Sbjct: 423 EASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEISVWNSLA 482
Query: 481 ASVCCNTADLNVCRKTLEQLSS 502
+S CN+ + V +T +++ S
Sbjct: 483 SSF-CNSGMMKVSTETFDRIRS 503
>gi|449445756|ref|XP_004140638.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
gi|449526108|ref|XP_004170056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
Length = 497
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/498 (64%), Positives = 397/498 (79%), Gaps = 2/498 (0%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS+RWPR+LTPT LSQII+KQ +P TA ++FKEAK +YP+YRHNGPVYA+MI IL S R
Sbjct: 1 MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
++EM+EV+DQM+ DSCECKDSVF+ AI+TYA G L + +SLFK+ +FNC N TQ+FNT
Sbjct: 61 VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ ++KES+L AA LF YGW VKSR QSLNLLM LCQ +S+LALHVFQEMD+Q
Sbjct: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
CYP+R SY I+MKGLC D RLNEA HLLYSMFWRIS+KG G DIVIYRTLLFALCD G+
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASY 299
I+ A++IL KILRKGLKAPK +RIDL C N IE KSLINEALI+GGIPS SY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
AMA+DLYNE + +GDKV+ M KGF P ++YEAK A+L K+G VD+A++VIEE++V
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
G VPT+ +YNI+LKGLCD G S VA+ YLKKM+KQVG VAN ETY LV GLC + R+
Sbjct: 361 GGC-VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRY 419
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+EA +VLEEM+I+S+ PC T+N LI+GLCS+GK YEAVMWLEEMISQ +LP + VW+SL
Sbjct: 420 IEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSL 479
Query: 480 VASVCCNTADLNVCRKTL 497
V+S+CC+ A +++C + L
Sbjct: 480 VSSLCCDVAGIDMCSRVL 497
>gi|297843350|ref|XP_002889556.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335398|gb|EFH65815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 503
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/491 (64%), Positives = 401/491 (81%), Gaps = 1/491 (0%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MSVRWPR+LTP+ LSQI+KKQK+P+TALK+F+EAK ++P+Y HNG VYA+MI IL SNR
Sbjct: 1 MSVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKVRFPSYGHNGTVYATMIDILGNSNR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ EMK VI++MKGDSCECKDSVFA+AIRT++RAG+L++A+SLFK+L +FNCVNWT SF+T
Sbjct: 61 VLEMKYVIERMKGDSCECKDSVFASAIRTFSRAGRLDDAISLFKSLHEFNCVNWTLSFDT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+EMVKES+LEAA +F + CYGWEV SRI +LNLLM VLCQ RSDLA VFQEM++Q
Sbjct: 121 LLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GCYPDR+S+ ILMKG C + +L+EATHLLYSMFWRISQKGSGEDIV+Y+ LL ALCD G+
Sbjct: 181 GCYPDRDSFRILMKGFCLEGKLDEATHLLYSMFWRISQKGSGEDIVVYKILLDALCDAGE 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASY 299
+ A++IL KILRKGLKAPK H+I+ ++ E I+ K L+ E LIRG IPSL SY
Sbjct: 241 VDQAIEILGKILRKGLKAPKRCYHQIEAGHWESNSEGIKRVKRLLTETLIRGAIPSLDSY 300
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
SAMA DL+ EG++VEG++VL MR KGF P+ +Y AK+ AL K G ++EA+ VI +EM+
Sbjct: 301 SAMATDLFEEGKLVEGEEVLLAMRRKGFEPTPFIYGAKVKALCKAGKLEEAVSVINKEMM 360
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G +PTV VYN+L+KGLCD G S AV YLKKMSKQV CVAN ETY L+DGLCRD +F
Sbjct: 361 EGHCLPTVGVYNVLIKGLCDEGKSMEAVGYLKKMSKQVSCVANEETYQTLMDGLCRDSQF 420
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
LEAS+V+EEMLI+S++P VETY+V+I+GLC + ++YEAVMWLEEM+SQ +P+ SVW +L
Sbjct: 421 LEASQVMEEMLIKSHFPGVETYHVMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 480
Query: 480 VASVCCNTADL 490
SVC D+
Sbjct: 481 AESVCFCAIDV 491
>gi|15220591|ref|NP_172051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334182311|ref|NP_001184914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213450|sp|Q9SYK1.1|PPR11_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g05600
gi|4836924|gb|AAD30626.1|AC007153_18 Hypothetical protein [Arabidopsis thaliana]
gi|53828567|gb|AAU94393.1| At1g05600 [Arabidopsis thaliana]
gi|56790224|gb|AAW30029.1| At1g05600 [Arabidopsis thaliana]
gi|332189741|gb|AEE27862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189742|gb|AEE27863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/489 (64%), Positives = 396/489 (80%), Gaps = 1/489 (0%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
VRWPR+LTP+ LSQI+KKQK+P+TALK+F+EAKE++P+Y HNG VYA+MI IL +SNR+
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
EMK VI++MK DSCECKDSVFA+ IRT++RAG+L +A+SLFK+L +FNCVNW+ SF+TLL
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+EMVKES+LEAA +F + CYGWEV SRI +LNLLM VLCQ RSDLA VFQEM++QGC
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
YPDR+SY ILMKG C + +L EATHLLYSMFWRISQKGSGEDIV+YR LL ALCD G++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA++IL KILRKGLKAPK H I+ + E IE K L+ E LIRG IP L SYSA
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
MA DL+ EG++VEG++VL MR+KGF P+ +Y AK+ AL + G + EA+ VI +EM++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+PTV VYN+L+KGLCD G S AV YLKKMSKQV CVAN ETY LVDGLCRDG+FLE
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
AS+V+EEMLI+S++P VETY+++I+GLC + ++YEAVMWLEEM+SQ +P+ SVW +L
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 482 SVCCNTADL 490
SVC D+
Sbjct: 484 SVCFCAIDV 492
>gi|357499195|ref|XP_003619886.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494901|gb|AES76104.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/501 (60%), Positives = 385/501 (76%), Gaps = 19/501 (3%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS+RWPR+L PTYL+QII+ QK+PL AL+IF EAK KYPNY HNGPVYA+MI IL S R
Sbjct: 1 MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKSKYPNYSHNGPVYATMINILGTSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ EM ++I+QMK DS ++EA+SL+KN+ QFNCVNWTQSFNT
Sbjct: 61 LKEMSDLIEQMKEDS------------------WLVDEAISLYKNIPQFNCVNWTQSFNT 102
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LLK MV E+KLE AH LF+ S GWEVKSR+Q+LNLLM LC+ RSDLAL +FQEMD+Q
Sbjct: 103 LLKIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQ 162
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
CYP+RESY I+MKGLC D+RL+EATHLLYSMFWRIS KG+GEDIVIYRTLL ALCD GK
Sbjct: 163 DCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGK 222
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+A++IL KILRKGLKAPK +R+D+ C DG+D+E K I+EAL+RG +PS ASY+
Sbjct: 223 FDEAVEILGKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEALVRGSVPSTASYT 282
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+MA+DLY EG+I E DKV+ EM+ + F P ++EAK+AAL K G VDEA++VIEE+MV+
Sbjct: 283 SMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVE 342
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+P RVY ILLK + GNS + L KMSK+V C+A+ ETY IL++ LCR+G++L
Sbjct: 343 VNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCREGKYL 402
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+AS++LE+M I+SYWP +YN+LI GLCS+G+QYEAVMWLE+MISQ KLP+ISVW+SL
Sbjct: 403 QASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEISVWNSLA 462
Query: 481 ASVCCNTADLNVCRKTLEQLS 501
+S CN+ + V +T Q++
Sbjct: 463 SSF-CNSGMMKVSAETFNQMN 482
>gi|296089005|emb|CBI38708.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 293/507 (57%), Positives = 348/507 (68%), Gaps = 47/507 (9%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MSV+WPR L PT LSQ+I+ QK+PLTALKIF EAK K+PNYRHNGPVYA+MI +L S R
Sbjct: 1 MSVKWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGR 60
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
I EM+EVIDQMK DSCECKDSVF++ ++TYARAG ++EAVSLFK L QFNCVNWT SFNT
Sbjct: 61 IAEMREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNT 120
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL+ +VKESKLE A LFL GWEVKSRI SLNLLMD LCQ RSDLALHVFQEM +Q
Sbjct: 121 LLRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQ 180
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD+ESY ILM+GLC D RLNEATHLLYSMFWRISQKG GEDI YRTLL ALCD G
Sbjct: 181 CCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGH 240
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A++IL K+L+KGLKAPK R +DL C +GEDIE K LINEALIRGG+PS+ASYS
Sbjct: 241 VEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYS 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL--FKDGMVDEALEVIEEEM 358
AMAIDLY+E +I E ++VLDEMR +GF PSL +YEAK+AAL +K LE + ++
Sbjct: 301 AMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRWKSAFAVGYLEKMARQV 360
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---SKQVGCVANGETYGILVDGLCR 415
V Y+IL+ GLC G A L++M S G ETY L+ GLC
Sbjct: 361 ---GCVADKETYSILVDGLCCDGRFVEASGILERMLIRSSSPGV----ETYNTLIRGLCL 413
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR +A LEEM+++ P V ++
Sbjct: 414 MGRQYDAVIWLEEMVVQGKLPAVSVWD--------------------------------- 440
Query: 476 WSSLVASVCCNTADLNVCRKTLEQLSS 502
SLVASVC N + VC +TLE+L S
Sbjct: 441 --SLVASVCSNMTEAGVCSETLEKLWS 465
>gi|388518071|gb|AFK47097.1| unknown [Medicago truncatula]
Length = 378
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/378 (61%), Positives = 295/378 (78%), Gaps = 1/378 (0%)
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
MV E+KLE AH LF+ S GWEVKSR+Q+LNLLM LC+ RSDLAL +FQEMD+Q CYP
Sbjct: 1 MVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQDCYP 60
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+RESY I+MKGLC D+RL+EATHLLYSMFWRIS KG+GEDIVIYRTLL ALCD GK +A
Sbjct: 61 NRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGKFDEA 120
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++IL KILRKGLKAPK +R+D+ C DG+D+E K I+EAL+RG PS ASY++MA+
Sbjct: 121 VEILGKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEALVRGSAPSTASYTSMAV 180
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
DLY EG+I E DKV+ EM+ + F P ++EAK+AAL K G VDEA++VIEE+MV+ +
Sbjct: 181 DLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCL 240
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P RVY ILLK + GNS + L KMSK+V C+A+ ETY IL++ LCR+G++L+AS+
Sbjct: 241 PNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCREGKYLQASQ 300
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+LE+M I+SYWP +YN+LI GLCS+G+QYEAVMWLE+MISQ KLP+ISVW+SL AS
Sbjct: 301 LLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEISVWNSL-ASSS 359
Query: 485 CNTADLNVCRKTLEQLSS 502
CN+ + V +T ++ S
Sbjct: 360 CNSGMMKVSAETFNRIKS 377
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF-KNL 106
Y SM L E +I E +VI +MK K S+F + + G+++EA+ + +++
Sbjct: 175 YTSMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDM 234
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ NC+ + + LLK + + + + ++ +L+++LC+ +
Sbjct: 235 VEVNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCREGK 294
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + ++M + +P SY++L++GLC+ R EA L M ISQ G +I
Sbjct: 295 YLQASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDM---ISQ-GKLPEIS 350
Query: 227 IYRTLLFALCDQGKIQDAMQILEKI 251
++ +L + C+ G ++ + + +I
Sbjct: 351 VWNSLASSSCNSGMMKVSAETFNRI 375
>gi|242059413|ref|XP_002458852.1| hypothetical protein SORBIDRAFT_03g041490 [Sorghum bicolor]
gi|241930827|gb|EES03972.1| hypothetical protein SORBIDRAFT_03g041490 [Sorghum bicolor]
Length = 495
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 301/488 (61%), Gaps = 19/488 (3%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN--YRHNGPVYASMIGILSESNR 60
VRWPR+LTP L+ I++QK+PL A ++ EA YP YRHN V ++++G + S
Sbjct: 6 VRWPRVLTPAQLAGAIRRQKNPLEAAHLYWEAPRGYPPSCYRHNDDVRSTLLGAAAGSPV 65
Query: 61 ITEM-KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ + + V+ S DS+ A +I + A AVS+F++ +
Sbjct: 66 LPSLLRRVLP-----SSPSADSLLAASIPNLSPAA----AVSIFRSSLPSSPSPSWSLSF 116
Query: 120 -TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
LL+ +V ++ L A LF EV L L+ LC RR DLAL V EM
Sbjct: 117 SALLRRLVSQALLPEAARLFADFAGRPEVSVASADLTPLIAGLCHVRRPDLALQVLDEMP 176
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
P+R++Y ++ LC+ L+EATH++YSM WR+SQ+G D+V+YR LL ALC
Sbjct: 177 NLCLAPERDAYRTIVPALCDAGMLDEATHVVYSMLWRVSQRGCDADVVVYRALLVALCAA 236
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRH-RIDLCPCNDGEDIEGAKSLINEAL-IRGGIPSL 296
G+ + A +L+K+LRKGL++P SRR R+ + + ED A+ I++AL +RGG ++
Sbjct: 237 GRGEQAELVLDKVLRKGLRSPGSRRSLRVPMLAVLNLED---ARESIDQALAVRGGR-TV 292
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
S+ +M IDLY E R + DK+L++M K F P++ MYEAK+AAL ++G VD+A+EV+E+
Sbjct: 293 CSFESMIIDLYEECRFDQADKLLEDMAKKNFKPTICMYEAKIAALCREGNVDDAVEVMEK 352
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E+ K VPTV YN+L+KGLCD S A+ YLKKM KQ+GCVA +T+ ILV GLC +
Sbjct: 353 ELPKNDLVPTVTTYNLLMKGLCDTMQSMRALEYLKKMDKQLGCVAQKDTFSILVHGLCSE 412
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
+F++AS+++E M+ + P +N +I GLCS G+ Y+A++WLEEMI + P+I VW
Sbjct: 413 TKFIDASKLMERMVKGHHRPDRSAFNSVIEGLCSAGRIYDALLWLEEMIDHGETPNIRVW 472
Query: 477 SSLVASVC 484
SSLV+ VC
Sbjct: 473 SSLVSVVC 480
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 20/336 (5%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV----SLFKNLSQFNCVNWTQSFNTL 121
+V+D+M + + T + AG L+EA S+ +SQ C + L
Sbjct: 170 QVLDEMPNLCLAPERDAYRTIVPALCDAGMLDEATHVVYSMLWRVSQRGCDADVVVYRAL 229
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L + + E A L L ++S +L + +L D + Q + +G
Sbjct: 230 LVALCAAGRGEQAE-LVLDKVLRKGLRSPGSRRSLRVPMLAVLNLEDARESIDQALAVRG 288
Query: 182 ----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
C S+ ++ L + R ++A LL M ++K I +Y + ALC
Sbjct: 289 GRTVC-----SFESMIIDLYEECRFDQADKLLEDM----AKKNFKPTICMYEAKIAALCR 339
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSL 296
+G + DA++++EK L K P + + + C+ + + + L G +
Sbjct: 340 EGNVDDAVEVMEKELPKNDLVPTVTTYNLLMKGLCDTMQSMRALEYLKKMDKQLGCVAQK 399
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++S + L +E + ++ K+++ M P + + + L G + +AL +EE
Sbjct: 400 DTFSILVHGLCSETKFIDASKLMERMVKGHHRPDRSAFNSVIEGLCSAGRIYDALLWLEE 459
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
M+ P +RV++ L+ +C + A+ L+K
Sbjct: 460 -MIDHGETPNIRVWSSLVSVVCISQFEALGAGLLEK 494
>gi|115441787|ref|NP_001045173.1| Os01g0913800 [Oryza sativa Japonica Group]
gi|113534704|dbj|BAF07087.1| Os01g0913800 [Oryza sativa Japonica Group]
gi|125573082|gb|EAZ14597.1| hypothetical protein OsJ_04520 [Oryza sativa Japonica Group]
Length = 494
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 197/483 (40%), Positives = 303/483 (62%), Gaps = 11/483 (2%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYP--NYRHNGPVYASMIGILSESNR 60
VRWPR+LTP +L+ I++QKSPL A+ ++ +A +YP +YRHN V++S++ S S+
Sbjct: 6 VRWPRVLTPAHLAGAIRRQKSPLDAVHLYADAPRRYPRSSYRHNDAVHSSLLAAASASSS 65
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN-WTQSFN 119
+ + S DS+ A +I A AVS+F++ + W++SF+
Sbjct: 66 DLLPSLLRRILP--SSPSADSLLAASIPHLPPAA----AVSVFRSSLPSSLAPSWSRSFS 119
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
LL+ ++ + L A LF EV + L L+ LC+ RR +LAL V EM
Sbjct: 120 ALLRRLLSDGLLPEAARLFADFAGRPEVSLASEDLTSLITGLCRARRPELALQVLDEMSN 179
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Q P++++Y ++ LC+ L+EATH+LYSM WR+SQKG ED+V+YR LL ALC G
Sbjct: 180 QCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWRVSQKGCDEDVVVYRALLVALCAAG 239
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + A +L+K++RKGL+ S R P G IE A+ +I++AL+ G ++AS+
Sbjct: 240 RGEQAEIVLDKVIRKGLR--SSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRGGRTVASF 297
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
M IDLY+EGR+ E D + EM KGF P++ MYEAK+ +L ++G +DEA++V+EEE+
Sbjct: 298 EVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVLEEELP 357
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K +PTV YN+L++GLC++ S A+ YL +M KQ+GCV ET+ IL+ GLC + RF
Sbjct: 358 KNDLIPTVTTYNLLMRGLCNSMQSMRALRYLGRMDKQLGCVTRKETFSILISGLCSESRF 417
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
++A++++E M+ + P +N +I GLCS G+ Y+A++WLEEMI + PD+ VWSSL
Sbjct: 418 IDAAQIMERMVKGHHRPEAGEFNNVIEGLCSAGRTYDALLWLEEMIDHGETPDVHVWSSL 477
Query: 480 VAS 482
V++
Sbjct: 478 VSA 480
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM----VKGTFVPTVRVYNI 372
+VLDEM + P Y A + AL GM+DEA V+ + KG V VY
Sbjct: 172 QVLDEMSNQCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWRVSQKGCDEDVV-VYRA 230
Query: 373 LLKGLCDAGNSAVAVMYLKKMSK------------------------------QVGCVAN 402
LL LC AG A + L K+ + Q V
Sbjct: 231 LLVALCAAGRGEQAEIVLDKVIRKGLRSSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRG 290
Query: 403 GET---YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
G T + ++V L +GR EA + +EM + + P + Y I LC G+ EAV
Sbjct: 291 GRTVASFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVK 350
Query: 460 WLEEMISQAKL-PDISVWSSLVASVCCNTADLNVCR 494
LEE + + L P ++ ++ L+ +C + + R
Sbjct: 351 VLEEELPKNDLIPTVTTYNLLMRGLCNSMQSMRALR 386
>gi|125528822|gb|EAY76936.1| hypothetical protein OsI_04894 [Oryza sativa Indica Group]
Length = 494
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/483 (40%), Positives = 302/483 (62%), Gaps = 11/483 (2%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYP--NYRHNGPVYASMIGILSESNR 60
VRWPR+LTP +L+ I++QKSPL A+ ++ +A +YP +YRHN V++S++ S S+
Sbjct: 6 VRWPRVLTPAHLAGAIRRQKSPLDAVHLYADAPRRYPRSSYRHNDAVHSSLLAAASASSS 65
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN-WTQSFN 119
+ + S DS+ A +I A AVS+F++ + W++SF+
Sbjct: 66 DLLPSLLRRILP--SSPSADSLLAASIPHLPPAA----AVSVFRSSLPSSLAPSWSRSFS 119
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
LL+ ++ + L A LF EV + L L+ LC+ RR +LAL V EM
Sbjct: 120 ALLRRLLSDGLLPEAARLFADFAGRPEVSLASEDLTSLITGLCRARRPELALQVLDEMSN 179
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Q P++++Y ++ LC+ L+EATH+LYSM W +SQKG ED+V+YR LL ALC G
Sbjct: 180 QCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWCVSQKGCDEDVVVYRALLVALCAAG 239
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + A +L+K++RKGL+ S R P G IE A+ +I++AL+ G ++AS+
Sbjct: 240 RGEQAEIVLDKVIRKGLR--SSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRGGRTVASF 297
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
M IDLY+EGR+ E D + EM KGF P++ MYEAK+ +L ++G +DEA++V+EEE+
Sbjct: 298 EVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVLEEELP 357
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K VPTV YN+L++GLC++ S A+ YL +M KQ+GCV ET+ IL+ GLC + RF
Sbjct: 358 KNDLVPTVTTYNLLMRGLCNSMQSMRALRYLGRMDKQLGCVTRKETFSILIRGLCSESRF 417
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
++A++++E M+ + P +N +I GLCS G+ Y+A++WLEEMI + PD+ VWSSL
Sbjct: 418 IDAAQIMERMVKGHHRPEAGEFNNVIEGLCSAGRTYDALLWLEEMIDHGETPDVHVWSSL 477
Query: 480 VAS 482
V++
Sbjct: 478 VSA 480
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM----VKGTFVPTVRVYNI 372
+VLDEM + P Y A + AL GM+DEA V+ + KG V VY
Sbjct: 172 QVLDEMSNQCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWCVSQKGCDEDVV-VYRA 230
Query: 373 LLKGLCDAGNSAVAVMYLKKMSK------------------------------QVGCVAN 402
LL LC AG A + L K+ + Q V
Sbjct: 231 LLVALCAAGRGEQAEIVLDKVIRKGLRSSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRG 290
Query: 403 GET---YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
G T + ++V L +GR EA + +EM + + P + Y I LC G+ EAV
Sbjct: 291 GRTVASFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVK 350
Query: 460 WLEEMISQAKL-PDISVWSSLVASVCCNTADLNVCR 494
LEE + + L P ++ ++ L+ +C + + R
Sbjct: 351 VLEEELPKNDLVPTVTTYNLLMRGLCNSMQSMRALR 386
>gi|326497429|dbj|BAK05804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/484 (40%), Positives = 304/484 (62%), Gaps = 13/484 (2%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYP--NYRHNGPVYASMIGILSESNR 60
VRWPR+L P +L+ I++QKSP A +++ +A YP +YRH+ V+AS++ + S+
Sbjct: 5 VRWPRVLAPAHLAGAIRRQKSPHEAAQLYADAPGWYPRGSYRHSDAVHASLLAAAASSSP 64
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFN 119
+ ++ D++ A +I A +A S+F++ L +W+ SF+
Sbjct: 65 ALLASLLRRVLR--RSPSADALLAASIPHLTAA----DAASMFRSSLPASPAPSWSLSFS 118
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
LL+ ++ L A L S EV + Q L LL+ +C+ RR DLAL V +EM
Sbjct: 119 ALLRRLLDRGLLPEAARLLADSQGRPEVSVQSQDLTLLISEMCRLRRPDLALQVLEEMSN 178
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Q PDR +Y ++ LC+ L+EATH++YSM WR+SQ+G D+V++R LL ALC G
Sbjct: 179 QCLEPDRGAYRAIVPALCDAGMLDEATHVVYSMLWRVSQRGCDGDVVVFRALLVALCAAG 238
Query: 240 KIQDAMQILEKILRKGLKAPKSRRH-RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ + A Q+L+KI+RKGL+ P SRR R+ P IE A+ I+ AL+ G ++AS
Sbjct: 239 RGELAEQVLDKIIRKGLRTPGSRRSLRV---PMLAVLTIEDAREAIDRALVVRGGRTVAS 295
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ ++ +DLY+EGR+ E D + +M KGF P++ M+EAK+ AL ++ VD+A++V+EEE+
Sbjct: 296 FESIILDLYDEGRLNEADNLFQDMGKKGFRPTICMFEAKIVALCREQRVDDAIKVLEEEL 355
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
V VPTV YN+L+KGLC A + A+ YLKKM KQ+GCVA +T+ IL+ GLC +GR
Sbjct: 356 VNNGLVPTVTSYNLLMKGLCQAMQAMKALGYLKKMDKQLGCVARKDTFSILISGLCSEGR 415
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
F+EA+RV+E M+ + P ++ +I GLC++G+ Y+A++WLEEMI + PD+ VWS
Sbjct: 416 FVEAARVMERMVKNHHRPDRNCFSNVIEGLCAVGRTYDALVWLEEMIDHGETPDVRVWSC 475
Query: 479 LVAS 482
LV+S
Sbjct: 476 LVSS 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 18/328 (5%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV----SLFKNLSQFNCVNWTQSFNTL 121
+V+++M E + + AG L+EA S+ +SQ C F L
Sbjct: 171 QVLEEMSNQCLEPDRGAYRAIVPALCDAGMLDEATHVVYSMLWRVSQRGCDGDVVVFRAL 230
Query: 122 LKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L + + E A + + G +SL + M L D + + + +
Sbjct: 231 LVALCAAGRGELAEQVLDKIIRKGLRTPGSRRSLRVPM--LAVLTIEDAREAIDRALVVR 288
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G S+ ++ L ++ RLNEA +L M +KG I ++ + ALC + +
Sbjct: 289 GGR-TVASFESIILDLYDEGRLNEADNLFQDM----GKKGFRPTICMFEAKIVALCREQR 343
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ DA+++LE+ L P + + LC G +++ L G +
Sbjct: 344 VDDAIKVLEEELVNNGLVPTVTSYNLLMKGLCQAMQAMKALGYLKKMDKQL--GCVARKD 401
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
++S + L +EGR VE +V++ M P + + L G +AL V EE
Sbjct: 402 TFSILISGLCSEGRFVEAARVMERMVKNHHRPDRNCFSNVIEGLCAVGRTYDAL-VWLEE 460
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAV 385
M+ P VRV++ L+ G S +
Sbjct: 461 MIDHGETPDVRVWSCLVSSSLGVGGSVI 488
>gi|357131535|ref|XP_003567392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Brachypodium distachyon]
Length = 500
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/486 (39%), Positives = 300/486 (61%), Gaps = 18/486 (3%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYP--NYRHNGPVYASMIGILSESNR 60
VRWPR+L P +L+ I++QK+PL A +++ +A Y +YRH+ V+AS++G S S
Sbjct: 8 VRWPRVLAPAHLAGAIRRQKNPLEAARLYDDAPRWYARSSYRHSDTVHASLLGAASASPS 67
Query: 61 I--TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS- 117
+ + ++ ++ S D++ A++I +AV++F++ +
Sbjct: 68 LLPSLLRRILR-----SSPSADALLASSIPHLPP----EDAVTIFRSSLPSSPAPSWSLS 118
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
F+ LL+ ++ L A L EV + ++LL+ +C+ RR DLAL V +EM
Sbjct: 119 FSALLRRLLSRGLLPEAARLLADFQGRPEVSVSSEDISLLISEMCRVRRPDLALQVLEEM 178
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
Q PDR +YH ++ LCN L EATH++YSM WR+SQ+G D+V+YR LL ALC
Sbjct: 179 PGQCLAPDRGAYHTIVPALCNAGMLEEATHVVYSMLWRVSQRGCDVDVVVYRALLVALCA 238
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRH-RIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G+ + A +L+KI+RKGL+ P SRR R+ P G I+ A+ I+ AL+ G ++
Sbjct: 239 AGQGEQAEIVLDKIIRKGLRTPGSRRSLRV---PMLGGLSIDDAREAIDRALVVRGGRTV 295
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
AS+ +M +DLY+EG + E D + +M KGF P++ MYEAK+ AL ++ VD+A++V+EE
Sbjct: 296 ASFESMVLDLYDEGCLNEADNLCKDMGKKGFKPTICMYEAKIIALCREQRVDDAIKVLEE 355
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E+ K VPTV YN+L+KGLCD S A+ +LK+M KQ+GCVA ET+ IL+ GLC +
Sbjct: 356 ELAKSGLVPTVTTYNLLMKGLCDIMQSMKALGFLKRMDKQLGCVARKETFSILIKGLCSE 415
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
+F+EA+RV+E M+ P ++ +I GLC +G+ Y+A++WLEEMI + D+ VW
Sbjct: 416 SQFVEAARVMERMVKGHRRPERTEFSNVIEGLCYLGRTYDALLWLEEMIDHGETRDVRVW 475
Query: 477 SSLVAS 482
SSLV+S
Sbjct: 476 SSLVSS 481
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEM----RTKGFWPSLVMYEAKLAALFKDGMVDE 349
P +Y + L N G + E V+ M +G +V+Y A L AL G ++
Sbjct: 185 PDRGAYHTIVPALCNAGMLEEATHVVYSMLWRVSQRGCDVDVVVYRALLVALCAAGQGEQ 244
Query: 350 ALEVIEEEMVKGTFVPTVR--VYNILLKGLC-DAGNSAVAVMYLKKMSKQVGCVANGETY 406
A V+++ + KG P R + +L GL D A+ + + + V ++
Sbjct: 245 AEIVLDKIIRKGLRTPGSRRSLRVPMLGGLSIDDAREAIDRALVVRGGRTVA------SF 298
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+V L +G EA + ++M + + P + Y I LC + +A+ LEE ++
Sbjct: 299 ESMVLDLYDEGCLNEADNLCKDMGKKGFKPTICMYEAKIIALCREQRVDDAIKVLEEELA 358
Query: 467 QAKL-PDISVWSSLVASVC 484
++ L P ++ ++ L+ +C
Sbjct: 359 KSGLVPTVTTYNLLMKGLC 377
>gi|413951563|gb|AFW84212.1| hypothetical protein ZEAMMB73_027046 [Zea mays]
Length = 494
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/486 (40%), Positives = 295/486 (60%), Gaps = 16/486 (3%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRI 61
VRWPR+LTP L+ I++QK PL A ++ +A +YP+ YRHN V +++G + S +
Sbjct: 6 VRWPRVLTPAQLAGAIRQQKDPLEAAHLYWDAPRRYPHSYRHNDDVRFTLLGTAAGSPVL 65
Query: 62 TEM-KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS-FN 119
+ + V+ S DS+ A +I + +AVS+F++ + F
Sbjct: 66 PSLLRRVLP-----SSPSADSLLAASIPKLSPP----DAVSIFRSSLPSSPSPSWSLSFT 116
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
LL+ +V ++ L A LF EV L LL+ LC+ RR DLAL V EM
Sbjct: 117 ALLRHLVSQALLPEAARLFADFARRPEVSIASADLTLLIIGLCRVRRPDLALQVLDEMPN 176
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
P+R++Y ++ LC+ L+EATH++YSM WR+SQ+G D+++YRTLL ALC G
Sbjct: 177 LCLAPERDAYRAIVPALCDAGMLDEATHVVYSMMWRVSQRGCDADVMVYRTLLAALCAAG 236
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL-IRGGIPSLAS 298
+ + A +L+K+LRKGL+ R P +E A+ I++AL +R G ++ S
Sbjct: 237 RGEQAELVLDKVLRKGLR--SPSSRRSLRVPMLAVLSVEDAREAIDQALAVRTGR-TVCS 293
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ +M +LY EGR + D++ +M KGF P++ MYEAK+ AL ++ VD+A+EV+EEE+
Sbjct: 294 FESMIFELYEEGRFDQADRLFQDMAKKGFRPTICMYEAKIGALCRERNVDDAVEVLEEEL 353
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K VPTV YN+L+KGLCD S A+ YLKKM KQ+GCVA +T+ ILV GLC + +
Sbjct: 354 PKNDLVPTVTTYNLLMKGLCDTMQSMRALEYLKKMDKQLGCVAQKDTFSILVHGLCSETK 413
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
F++AS+++E M+ + P +N +I GLCS G+ Y+A++WLEEMI+ + P+ VWSS
Sbjct: 414 FVDASKLMERMVKGHHRPDKSAFNRVIEGLCSAGRIYDALLWLEEMINHGETPNAGVWSS 473
Query: 479 LVASVC 484
LV++VC
Sbjct: 474 LVSAVC 479
>gi|56784408|dbj|BAD82447.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|215694487|dbj|BAG89480.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 318
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 206/306 (67%), Gaps = 2/306 (0%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M Q P++++Y ++ LC+ L+EATH+LYSM WR+SQKG ED+V+YR LL ALC
Sbjct: 1 MSNQCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWRVSQKGCDEDVVVYRALLVALC 60
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G+ + A +L+K++RK S R P G IE A+ +I++AL+ G ++
Sbjct: 61 AAGRGEQAEIVLDKVIRK--GLRSSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRGGRTV 118
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
AS+ M IDLY+EGR+ E D + EM KGF P++ MYEAK+ +L ++G +DEA++V+EE
Sbjct: 119 ASFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVLEE 178
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E+ K +PTV YN+L++GLC++ S A+ YL +M KQ+GCV ET+ IL+ GLC +
Sbjct: 179 ELPKNDLIPTVTTYNLLMRGLCNSMQSMRALRYLGRMDKQLGCVTRKETFSILISGLCSE 238
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
RF++A++++E M+ + P +N +I GLCS G+ Y+A++WLEEMI + PD+ VW
Sbjct: 239 SRFIDAAQIMERMVKGHHRPEAGEFNNVIEGLCSAGRTYDALLWLEEMIDHGETPDVHVW 298
Query: 477 SSLVAS 482
SSLV++
Sbjct: 299 SSLVSA 304
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
I + +E+IDQ + F + G+LNEA +LFK + + +
Sbjct: 99 IEDAQEIIDQALVVRGGRTVASFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEA 158
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+ + +E +L+ A + ++ + + NLLM LC +S AL MD Q
Sbjct: 159 KITSLCREGRLDEAVKVLEEELPKNDLIPTVTTYNLLMRGLCNSMQSMRALRYLGRMDKQ 218
Query: 181 -GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
GC +E++ IL+ GLC++ R +A ++ M + +GE + ++ LC G
Sbjct: 219 LGCVTRKETFSILISGLCSESRFIDAAQIMERMVKGHHRPEAGE----FNNVIEGLCSAG 274
Query: 240 KIQDAMQILEKILRKG 255
+ DA+ LE+++ G
Sbjct: 275 RTYDALLWLEEMIDHG 290
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 83/211 (39%), Gaps = 39/211 (18%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM----VKGTFVPTVRVYNILLKGL 377
M + P Y A + AL GM+DEA V+ + KG V VY LL L
Sbjct: 1 MSNQCLAPEKDAYRAIVPALCDAGMLDEATHVLYSMLWRVSQKGCDEDVV-VYRALLVAL 59
Query: 378 CDAGNSAVAVMYLKKMSK------------------------------QVGCVANGET-- 405
C AG A + L K+ + Q V G T
Sbjct: 60 CAAGRGEQAEIVLDKVIRKGLRSSGSRRSLRVPMLAGLSIEDAQEIIDQALVVRGGRTVA 119
Query: 406 -YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ ++V L +GR EA + +EM + + P + Y I LC G+ EAV LEE
Sbjct: 120 SFEVMVIDLYDEGRLNEADNLFKEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVLEEE 179
Query: 465 ISQAKL-PDISVWSSLVASVCCNTADLNVCR 494
+ + L P ++ ++ L+ +C + + R
Sbjct: 180 LPKNDLIPTVTTYNLLMRGLCNSMQSMRALR 210
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
SF ++ ++ E +L A LF + K I + LC+ R D A+ V +E
Sbjct: 120 SFEVMVIDLYDEGRLNEADNLF-KEMGKKGFKPTIYMYEAKITSLCREGRLDEAVKVLEE 178
Query: 177 -MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+ P +Y++LM+GLCN + A L M Q G + L+ L
Sbjct: 179 ELPKNDLIPTVTTYNLLMRGLCNSMQSMRALRYLGRMD---KQLGCVTRKETFSILISGL 235
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKS 261
C + + DA QI+E+++ KG P++
Sbjct: 236 CSESRFIDAAQIMERMV-KGHHRPEA 260
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 240/486 (49%), Gaps = 19/486 (3%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
+L P +++ ++K QK PL AL IF K K ++H Y MI L M+ V
Sbjct: 4 ILLPKHVAAVLKYQKDPLKALSIFNSVK-KEDGFKHTFLTYKRMIEKLGFHGEFDAMERV 62
Query: 68 IDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+ +M+ + + V+ +A+R Y R G++ EAV +F+ + +NC S+N ++ +V
Sbjct: 63 LMEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILV 122
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ AH ++LR + + + + + + C+ +R AL + M QGC +
Sbjct: 123 EYGYFNQAHKVYLRMKHEG-IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNA 181
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y ++ G + EA Y +F ++ + G I + L+ LC +G +Q+ +
Sbjct: 182 VVYCTVISGFYEENYQVEA----YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEK 237
Query: 247 ILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEA------LIRGGI-PSLAS 298
+L K+L+ G+ P I + C G +EGA S + EA ++ G+ P +
Sbjct: 238 LLNKVLKNGV-CPNLFTFNIFIQGLCRKGV-LEGANSKVVEAENYLHKMVNKGLEPDDFT 295
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + G+I + ++L + + KGF P Y + + + +DG +D AL + EE +
Sbjct: 296 YNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL 355
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG P++ +YN L+KGL G A+ + MSK+ G + TY ++++GLC+ G
Sbjct: 356 GKG-LKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE-GMSPDIWTYNLVINGLCKMGC 413
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A+ +L + + Y P + T+N LI G C K A+ L+ M S PD+ ++S
Sbjct: 414 VSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNS 473
Query: 479 LVASVC 484
++ +C
Sbjct: 474 ILNGLC 479
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 210/496 (42%), Gaps = 48/496 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ IL E + +V +MK + F I+++ R + A+ L N+
Sbjct: 114 YNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMP 173
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C + T++ +E+ A+ LF + I + N LM +LC+
Sbjct: 174 SQGCELNAVVYCTVISGFYEENYQVEAYELF-NKMLRLGIFPHIATFNKLMHILCKKGHL 232
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCN-------DRRLNEATHLLYSMFWRISQKG 220
+ ++ G P+ +++I ++GLC + ++ EA + L+ M KG
Sbjct: 233 QEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV----NKG 288
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D Y T+++ GKIQDA +IL+ KG + + + C DG DI+ A
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDG-DIDHA 347
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L EAL +G PS+ Y+ + L +G +++ +++++M +G P + Y +
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407
Query: 341 LFKDGMVDEALEVIEEEMVKG------TF----------------------------VPT 366
L K G V +A ++ + KG TF P
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V YN +L GLC A VM KM + GC+ N TY IL++ LC+ + EA +L
Sbjct: 468 VITYNSILNGLCKAAKPE-DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLL 526
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EE+ R P ++ +I G C+ G EA M Q ++ +++ +
Sbjct: 527 EEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSE 586
Query: 487 TADLNVCRKTLEQLSS 502
D+++ +K ++
Sbjct: 587 KLDMDMAQKLFHEMGD 602
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 195/426 (45%), Gaps = 12/426 (2%)
Query: 53 GILSESN-RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
G+L +N ++ E + + +M E D + T I Y++ G++ +A + K+
Sbjct: 265 GVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGF 324
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
V ++ +L+ + ++ ++ A LF G +K I N L+ L Q AL
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALF-EEALGKGLKPSIVLYNTLIKGLSQQGLVLKAL 383
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ +M +G PD +Y++++ GLC +++A +LL + KG DI + TL
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI----AKGYLPDIFTFNTL 439
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALI 289
+ C + K+ +A+ IL+ + G+ + I LC ED+ +I E
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME--- 496
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G +P++ +Y+ + L ++ E +L+E+R +G P V + ++ +G +DE
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A ++ + TV YNI++ + + +A +M + GC + TY ++
Sbjct: 557 AYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK-GCDPDSYTYRVM 615
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ G L + + + P + T+ +I LC + +EAV + M+
Sbjct: 616 IDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGV 675
Query: 470 LPDISV 475
+P+ V
Sbjct: 676 VPEAVV 681
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 219/523 (41%), Gaps = 55/523 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T + + K PL AL++ + N VY ++I E N E
Sbjct: 144 PDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQ--GCELNAVVYCTVISGFYEENYQVEAY 201
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKE 124
E+ ++M + F + + G L E L K L C N +FN ++
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLF-TFNIFIQG 260
Query: 125 MVKESKLEAAHIL------FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
+ ++ LE A+ +L ++ + N ++ + + A + ++
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
F+G PD +Y L+ G+C D ++ A ++F KG IV+Y TL+ L Q
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHAL----ALFEEALGKGLKPSIVLYNTLIKGLSQQ 376
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G + A+Q++ + ++G+ + + C G + A +L+N A+ +G +P + +
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMG-CVSDANNLLNAAIAKGYLPDIFT 435
Query: 299 YSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
++ + ID Y ++ +LD M + G P ++ Y + L L K ++ +E +
Sbjct: 436 FNTL-IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M KG +P + YNIL++ LC A A+ L+++ + G + + ++G ++ G C +G
Sbjct: 495 MEKGC-LPNIITYNILIESLCKARKVTEALDLLEEIRNR-GLIPDPVSFGTVISGFCNNG 552
Query: 418 RFLEASRVLEEM---------------LIRSYW---------------------PCVETY 441
EA ++ M +I ++ P TY
Sbjct: 553 DLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTY 612
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V+I G C +G +L + I +P ++ + ++ +C
Sbjct: 613 RVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLC 655
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S++ L ++ + ++ E + C + I + +A ++ EA+ L + +
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIR 530
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ SF T++ L+ A+ LF R + + + + N++++ +
Sbjct: 531 NRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDM 590
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D+A +F EM +GC PD +Y +++ G C +N Y + + G +
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG----YDFLLKEIEIGFVPSLTT 646
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ ++ LC Q ++ +A+ I+ ++R G+
Sbjct: 647 FGRVINCLCVQHRVHEAVGIVHLMVRTGV 675
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 239/482 (49%), Gaps = 16/482 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P +++ +I+ Q PL ALK+F + K + ++H Y MI L + M++
Sbjct: 3 RALQPKHVAAVIRYQNDPLNALKMFNQVKTE-DGFKHTLETYKCMIEKLGLHGKFEAMED 61
Query: 67 VIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+ +M+ + + + V+ +R Y R G++ EAV++F+ + ++C QS+N ++ +
Sbjct: 62 VLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+ AH +++R + + + + M C R AL + M QGC +
Sbjct: 122 VEYGYFSQAHKVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN 180
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY ++ G + EA HL M ++G DI+ + L+ LC +G +Q++
Sbjct: 181 AVSYCAVISGFYKENCQIEAYHLFDEML----KQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ K++++G+ P I + C G I+ A L+ + G P + SY+ +
Sbjct: 237 KLFSKVMKRGV-CPNLFTFNIFIQGLCRKGA-IDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
++VE + L +M G P+ Y + K GM+ A +++ + M KG F+
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG-FI 353
Query: 365 PTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P Y+ L+ GLC+ G N A+AV Y + M K G + Y LV GL + G L+A
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFY-EAMEK--GFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+++++M+ P + TYN+++ GLC +G +A L + I++ +PDI +++L+
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 483 VC 484
C
Sbjct: 471 YC 472
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 48/421 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQ-MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
+ +I +L + + E +++ + MK C F I+ R G ++EA L ++
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP-NLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ S+NTL+ K SKL A +L V+ + N +++ C+
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAEC-YLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A + ++ F+G PD +Y L+ GLCND +N A ++F+ +KG I
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM----AVFYEAMEKGFKHSI 391
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
++Y TL+ L QG + A+Q+++ ++ G
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS---------------------------- 423
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P + +Y+ + L G + + + +L++ KG P + + + K
Sbjct: 424 --------PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D+A+E+++ + G P V YN LL GLC A V K M ++ GC N T
Sbjct: 476 NMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK-GCTPNIIT 533
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG---KQYEAVMWLE 462
Y IL++ C+D + EA + +EM R P + T LI GLCS G K YE + +E
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 463 E 463
+
Sbjct: 594 K 594
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 183/425 (43%), Gaps = 7/425 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + +++ E + + +M E + + T I + +AG + A + ++
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++++L+ + + + A +F + K I N L+ L +
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGLSKQGLV 407
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + ++M GC PD +Y++++ GLC L++A +L KG DI
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI----AKGCIPDIFT 463
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ C Q + A++IL+ +L G+ P + L ++
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGI-TPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L +G P++ +Y+ + + ++ E ++ EM+T+G P +V + L +G +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A E+ + F + ++NI++ C N ++A KM C + TY
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS-DCAPDNYTYR 641
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++D C+ G A L E + + P T ++ LC + EAV+ + M+
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 468 AKLPD 472
+P+
Sbjct: 702 GIVPE 706
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 239/482 (49%), Gaps = 16/482 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P +++ +I+ Q PL ALK+F + K + ++H Y MI L + M++
Sbjct: 3 RALQPKHVAAVIRYQNDPLNALKMFNQVKTE-DGFKHTLETYKCMIEKLGLHGKFEAMED 61
Query: 67 VIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+ +M+ + + + V+ +R Y R G++ EAV++F+ + ++C QS+N ++ +
Sbjct: 62 VLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+ AH +++R + + + + M C R AL + M QGC +
Sbjct: 122 VEYGYFSQAHKVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN 180
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY ++ G + EA HL M ++G DI+ + L+ LC +G +Q++
Sbjct: 181 AVSYCAVISGFYKENCQIEAYHLFDEML----KQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ K++++G+ P I + C G I+ A L+ + G P + SY+ +
Sbjct: 237 KLFSKVMKRGV-CPNLFTFNIFIQGLCRKGA-IDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
++VE + L +M G P+ Y + K GM+ A +++ + M KG F+
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG-FI 353
Query: 365 PTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P Y+ L+ GLC+ G N A+AV Y + M K G + Y LV GL + G L+A
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFY-EAMEK--GFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+++++M+ P + TYN+++ GLC +G +A L + I++ +PDI +++L+
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 483 VC 484
C
Sbjct: 471 YC 472
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 48/421 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQ-MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
+ +I +L + + E +++ + MK C F I+ R G ++EA L ++
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP-NLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ S+NTL+ K SKL A +L V+ + N +++ C+
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAEC-YLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A + ++ F+G PD +Y L+ GLCND +N A ++F+ +KG I
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM----AVFYEAMEKGFKHSI 391
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
++Y TL+ L QG + A+Q+++ ++ G
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS---------------------------- 423
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P + +Y+ + L G + + + +L++ KG P + + + K
Sbjct: 424 --------PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D+A+E+++ + G P V YN LL GLC A V K M ++ GC N T
Sbjct: 476 NMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK-GCTPNIIT 533
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG---KQYEAVMWLE 462
Y IL++ C+D + EA + +EM R P + T LI GLCS G K YE + +E
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 463 E 463
+
Sbjct: 594 K 594
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 184/425 (43%), Gaps = 7/425 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + +++ E + + +M E + + T I + +AG + A + ++
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++++L+ + + + A +F + K I N L+ L +
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGLSKQGLV 407
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + ++M GC PD +Y++++ GLC L++A +L KG DI
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI----AKGCIPDIFT 463
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ C Q + A++IL+ +L G+ P + L ++
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGI-TPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L +G P++ +Y+ + + ++ E ++ EM+T+G P +V + L +G +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A E+ + F + ++NI++ C+ N ++A KM C + TY
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS-DCAPDNYTYR 641
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++D C+ G A L E + + P T ++ LC + EAV+ + M+
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 468 AKLPD 472
+P+
Sbjct: 702 GIVPE 706
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 237/469 (50%), Gaps = 21/469 (4%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRIT 62
+WP+ +T + + Q+IK +K A+ +F A +Y N +RH+ + +I L N+
Sbjct: 8 KWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFR 67
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++++MK + C + +F + R Y R + +A+ +F + F +++ T+L
Sbjct: 68 PAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTIL 127
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQG 181
+V+E+ ++ A I F R + S + SLN+L+ LC+ + + D AL +FQEM +G
Sbjct: 128 DILVEENHVKRA-IGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRG 186
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C PD +Y L+ GLC ++EA L F + QKG +V Y +L+ LC +
Sbjct: 187 CQPDSYTYGTLINGLCRLGNISEAKEL----FKEMEQKGFSASVVTYTSLIHGLCQSNNL 242
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A+ +LE++ R ++ + C G + A L+ + +P++ +YS
Sbjct: 243 DEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQ-AMQLLEVMDKKHHLPNMVTYST 301
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L E ++ E ++LD MR +G P+ +Y ++ L G EA I +EMV G
Sbjct: 302 LINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFI-DEMVLG 360
Query: 362 TFVPT-------VRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVA-NGETYGILVDG 412
P VR++N++++GLC+ + A +YL S + C++ +T+ LV
Sbjct: 361 GISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYL---SMRTRCISVEIDTFDCLVKC 417
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
C+ G +A+R+LEEM++ P +NV+I GL K EA L
Sbjct: 418 FCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQL 466
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 177/386 (45%), Gaps = 21/386 (5%)
Query: 116 QSFNTLLKEMVK-ESKLEAAHILFLRSC--YGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
Q N+L+ +++K E + A +F + YG + ++ L++ L + A
Sbjct: 12 QITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEG 71
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---FWRISQKGSGEDIVIYR 229
+ + M + C + + + +G R +A + + M R +QK Y
Sbjct: 72 MLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKA-------YL 124
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
T+L L ++ ++ A+ ++ G+ + + + C + E ++ A + E
Sbjct: 125 TILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPN 184
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P +Y + L G I E ++ EM KGF S+V Y + + L + +DE
Sbjct: 185 RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDE 244
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ ++EE M + P V Y+ L+ GLC G+S+ A+ L+ M K+ + N TY L
Sbjct: 245 AIGLLEE-MKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKK-HHLPNMVTYSTL 302
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GLC++ + EA +L+ M I+ P Y +I GLC+ G EA +++EM+
Sbjct: 303 INGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGI 362
Query: 470 LPDISVWS------SLVASVCCNTAD 489
P+ + WS ++V CN D
Sbjct: 363 SPNRASWSLHVRMHNMVVQGLCNNVD 388
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 242/508 (47%), Gaps = 45/508 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P +++ ++K+QK PL AL++F + K + ++H+ Y +I L M+ V+
Sbjct: 5 LLPKHVAAVLKQQKDPLKALEMFNKVKRE-DGFKHSLLTYKCIIQKLGFHGNFVAMENVL 63
Query: 69 DQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ + D + V+ A+++Y R G++ EAV +F+ + +NC S+N ++ +V+
Sbjct: 64 AETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVE 123
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ AH +FLR + + + + + C+ +R AL + M QGC +
Sbjct: 124 SGYFKQAHKVFLRM-KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAV 182
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y ++ G + EA Y +F + + G D+ + LL LC +G++Q++ ++
Sbjct: 183 AYCTVVAGFYEENYRVEA----YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL 238
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L K+L+KG+ + + C G + GA S+++ + G P + +Y+ + L
Sbjct: 239 LNKVLKKGMCSNLFTFNIFIQGLCRKGM-LSGAMSMLDSVIREGLTPDVVTYNTLICGLC 297
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-- 365
+VE +K L ++ G P Y + K GM+ A ++++ + KG FVP
Sbjct: 298 KNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG-FVPDE 356
Query: 366 ---------------------------------TVRVYNILLKGLCDAGNSAVAVMYLKK 392
TV +YN+L+KGLC G A+ + +
Sbjct: 357 FTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNE 416
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
MS+ GC ++ TY ++++GLC+ G +A+ ++ + + + Y P V T+N LI G C
Sbjct: 417 MSEN-GCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL 475
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
K + L +M S PD+ ++S++
Sbjct: 476 KMETTIQILNKMWSHGVTPDVITYNSVL 503
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 215/511 (42%), Gaps = 46/511 (9%)
Query: 31 FKEAKEKYPNYRHNG---PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFAT 85
FK+A + + ++ G VY I I S + R +++ M C+ + T
Sbjct: 127 FKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCT 186
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + EA LF ++ + +FN LL + K+ +++ + L L
Sbjct: 187 VVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL-LNKVLKK 245
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S + + N+ + LC+ A+ + + +G PD +Y+ L+ GLC + + EA
Sbjct: 246 GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L+ ++ G D Y TL+ C G +Q+A +IL+ + KG +
Sbjct: 306 EKYLH----KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCS 361
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C + E I+ A +L N AL +G P++ Y+ + L EG I++ ++++EM
Sbjct: 362 LINGLCQNDE-IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSEN 420
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + Y + L K G V +A ++ + + KG +VP V +N L+ G C
Sbjct: 421 GCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG-YVPDVFTFNTLIDGYCKQLKMET 479
Query: 386 AVMYLKKM-------------------SKQV---------------GCVANGETYGILVD 411
+ L KM SK V GCV N TY IL +
Sbjct: 480 TIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTE 539
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
LC+ G+ EA +++E+L + P ++ +I G + G A M Q K+
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599
Query: 472 DISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ +++ + DL++ K ++ +
Sbjct: 600 HTTATYNIMINAFAEKLDLHMGEKLFLEMGA 630
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 186/426 (43%), Gaps = 7/426 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L +++ + E ++ + ++ E + T I Y + G L A + +
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V ++ +L+ + + +++ A LF + G +K + N+L+ LCQ
Sbjct: 349 CKGFVPDEFTYCSLINGLCQNDEIDRALALF-NAALGKGLKPTVILYNMLIKGLCQEGLI 407
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + EM GC D +Y++++ GLC +++A +L+ KG D+
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI----AKGYVPDVFT 463
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ C Q K++ +QIL K+ G+ P + L + E
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGV-TPDVITYNSVLNGLSKAVKNEDLMETFETM 522
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ +G +P+ +Y+ + L G++ E ++DE+ KG P V + ++ +G +
Sbjct: 523 VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDL 582
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A ++ + T YNI++ + + + +M GC + TY
Sbjct: 583 KGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAG-GCAPDTYTYR 641
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++DG C G + L EM+ + + P + T+ +I LC + +EAV + M+
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701
Query: 468 AKLPDI 473
+P++
Sbjct: 702 GIVPEV 707
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 42/317 (13%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ VF+ MDF C P SY+ +M L +A + +F R+ G D+ +
Sbjct: 95 AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQA----HKVFLRMKNVGIVPDVYTFT 150
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+ + C + A+++L ++ +G C N
Sbjct: 151 IRIKSFCRTKRPHSALRLLNNMVSQG-------------CQLN----------------- 180
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+Y + Y E VE ++ ++M G +P + + L L K G V E
Sbjct: 181 ------AVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQE 234
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+ ++ + + KG + +NI ++GLC G + A+ L + ++ G + TY L
Sbjct: 235 SERLLNKVLKKG-MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE-GLTPDVVTYNTL 292
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLC++ +EA + L +++ P TYN LI G C +G A L+ I +
Sbjct: 293 ICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGF 352
Query: 470 LPDISVWSSLVASVCCN 486
+PD + SL+ +C N
Sbjct: 353 VPDEFTYCSLINGLCQN 369
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS+ SY+A+ L G + KV M+ G P + + ++ + + AL +
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ + +G + V Y ++ G + A M + +G + T+ L+ L
Sbjct: 169 LNNMVSQGCQLNAV-AYCTVVAGFYEENYRVEAYELFNDMLR-IGIFPDVSTFNKLLHTL 226
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G E+ R+L ++L + + T+N+ I+GLC G A+ L+ +I + PD+
Sbjct: 227 CKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDV 286
Query: 474 SVWSSLVASVCCNT 487
+++L+ +C N+
Sbjct: 287 VTYNTLICGLCKNS 300
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 216/454 (47%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K R + Y SM+ +L ++ R+ E +E+ QM+ + + T
Sbjct: 265 AWKFFHELKAH--GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y A + ++A L + L + C+ SFN++L + K+ K++ A LF +
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF--DVMKKD 380
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
K I + N+++D+LC R + A + EM+ G +P+ S +I++ LC +L EA
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA- 439
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +F S++G + V Y +L+ L +GKI DA ++ EK+L G
Sbjct: 440 ---HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG----------- 485
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
A +I +LIR + + GR +G K+ EM +G
Sbjct: 486 -----------HDANPIIYTSLIR--------------NFFMHGRKEDGHKIYKEMIRRG 520
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +FK G V++ I E+M F+P VR Y+IL+ GL AG +
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKG-RAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARET 579
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ MS+Q G + Y +VDGLC+ G+ +A VLEEM ++ P V TY ++
Sbjct: 580 SNIFQAMSQQ-GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVD 638
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S+ ++ ++SSL+
Sbjct: 639 GLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLI 672
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 187/430 (43%), Gaps = 43/430 (10%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++N++ E + + C + + I + G++++A LF+ +
Sbjct: 426 MVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ +L++ + E H ++ + + + LN MD + + +
Sbjct: 486 HDANPIIYTSLIRNFFMHGRKEDGHKIY-KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKG 544
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+F++M G PD SY IL+ GL + E +++ +M SQ+G D Y
Sbjct: 545 RAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM----SQQGFALDARAYNA 600
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ LC GK+ A ++LE++ K +
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVH--------------------------------- 627
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P++A+Y ++ L R+ E + +E ++KG ++++Y + + K G +DEA
Sbjct: 628 ---PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EE M KG P V +N L+ L A++ + M K++ C N TY IL+
Sbjct: 685 YLILEEMMKKG-LTPNVYTWNSLMDALVKTEEIDEALICFQSM-KEMKCSPNTYTYSILI 742
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+GLCR ++ +A +EM + P V TY +I GL +G +A E + +
Sbjct: 743 NGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI 802
Query: 471 PDISVWSSLV 480
PD + +++L+
Sbjct: 803 PDSASFNALI 812
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 182/442 (41%), Gaps = 79/442 (17%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
++ +R Y +IG L+E+ + E++ QM+ E +F T +R AR GQ+
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
A++L + VK S LE +L+ N+
Sbjct: 228 EPALALV--------------------DEVKGSCLEPDIVLY----------------NV 251
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+D + D+A F E+ G PD SY ++ LC RL EA L F ++
Sbjct: 252 CIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL----FGQM 307
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ Y T++ + DA ++LE+ LR+
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLER-LRE---------------------- 344
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
RG IPS+ S++++ L + ++ E + D M+ K P++ Y
Sbjct: 345 -------------RGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNI 390
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L G V+EA ++ +E + G F P + NI++ LC A A + S++
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLF-PNLLSVNIMVDRLCKANQLEEAHRIFESASER 449
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N TY L+DGL + G+ +A R+ E+ML + Y LIR G++ +
Sbjct: 450 -GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508
Query: 457 AVMWLEEMISQAKLPDISVWSS 478
+EMI + PD+++ ++
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNT 530
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 170/427 (39%), Gaps = 78/427 (18%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P LL+ + + K A +IF+ A E+ N N Y S+I L + +I +
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCN--PNSVTYCSLIDGLGKKGKIDDA 474
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYA--------------------------------- 91
+ ++M + ++ + IR +
Sbjct: 475 YRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDC 534
Query: 92 --RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVK 148
+AG++ + ++F+++ F + +S++ L+ + K + E ++I S G+ +
Sbjct: 535 VFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALD 594
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+R + N ++D LC+ + D A V +EM + +P +Y ++ GL RL+EA
Sbjct: 595 AR--AYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEA--- 649
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK----------- 257
Y +F KG ++++Y +L+ G+I +A ILE++++KGL
Sbjct: 650 -YMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708
Query: 258 -----------------------APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+P + + I + + A E +G IP
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP 768
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ M L G I + + + +T G P + A + + EA +V
Sbjct: 769 NVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVF 828
Query: 355 EEEMVKG 361
EE ++G
Sbjct: 829 EETRLRG 835
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+KVL+EM G+ A +A L + +++A VI M F P Y +L+
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGA-MRHLKFRPPFSAYTVLIG 184
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L +A A+ L++M + VG + + LV L R+G+ A +++E+
Sbjct: 185 ALAEARQPERALELLRQM-QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE 243
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + YNV I G A + E+ + PD ++S+V +C
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 231/468 (49%), Gaps = 17/468 (3%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRIT 62
+W + +TPT++ Q+I+ ++ AL IF A +Y N ++H+ ++ MI L +N+
Sbjct: 37 KWAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFR 96
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++D+MK + + + + + R Y R + +++ +F + F+C +S+ ++L
Sbjct: 97 LAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVL 156
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQG 181
+V+E++L++A F R + + SLN+L+ C+ + D A+H+F+ M G
Sbjct: 157 AILVEENQLKSA-FRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHG 215
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C PD +Y L+ GLC R + EA LL M KG +V Y +++ LC +
Sbjct: 216 CEPDSYTYGTLINGLCRFRSIVEAKELLQEM----ETKGCSPSVVTYTSIIHGLCQLNNV 271
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+AM++LE + K ++ + C G A+ ++ + + P++ SYS
Sbjct: 272 DEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHS-SRARDILELMIQKRLRPNMISYST 330
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L NEG+I E ++ D M+ +GF P +Y + L EA ++E ++ G
Sbjct: 331 LLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCG 390
Query: 362 ------TFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLC 414
T+ VR +N ++ GLC NS A +YL +++ + +T+ L+ C
Sbjct: 391 IKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITV--DTFNSLLKCFC 448
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+ SR+L+EM+I P E ++ ++ C K +A+ L+
Sbjct: 449 NKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++L L ++ +++ A + + + G+ + + + C + ++ A L
Sbjct: 152 YISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTM 211
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P +Y + L IVE ++L EM TKG PS+V Y + + L + V
Sbjct: 212 SNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNV 271
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA+ ++E+ M P V Y+ L+ G C G+S+ A L+ M Q N +Y
Sbjct: 272 DEAMRLLED-MKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMI-QKRLRPNMISYS 329
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L++GLC +G+ EA + + M ++ + P Y ++ LC + + EA +L+EM+
Sbjct: 330 TLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLC 389
Query: 468 AKLPDISVWS 477
P+ WS
Sbjct: 390 GIKPNRITWS 399
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 310 GRI---VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GRI ++ +V +M+ P+ Y + LA L ++ + A + M K PT
Sbjct: 125 GRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRD-MRKMGIPPT 183
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V N+L+K C + M+L + GC + TYG L++GLCR +EA +L
Sbjct: 184 VTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELL 243
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM + P V TY +I GLC + EA+ LE+M + P++ +SSL+ C
Sbjct: 244 QEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFC 301
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 292 GIPSLASYSAMAIDLY--NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
GIP + + I + N G + + + M G P Y + L + + E
Sbjct: 179 GIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVE 238
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+++E KG P+V Y ++ GLC N A+ L+ M K N TY L
Sbjct: 239 AKELLQEMETKGC-SPSVVTYTSIIHGLCQLNNVDEAMRLLEDM-KDKNIEPNVFTYSSL 296
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ G A +LE M+ + P + +Y+ L+ GLC+ GK EA+ + M Q
Sbjct: 297 MDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGF 356
Query: 470 LPDISVWSSLVASVC 484
PD ++ +V +C
Sbjct: 357 KPDAGLYGKIVNCLC 371
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 227/454 (50%), Gaps = 17/454 (3%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRIT 62
+WP+ +T + + Q+IK +K L +F A E+Y N +RH+ + +MI L N+
Sbjct: 8 KWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFR 67
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++++MK + CE + VF T R Y R + +A+ +F + F +S+ T+
Sbjct: 68 PAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVF 127
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQG 181
+V+E+ ++ A I F + + + SLN+L+ LC+ + + A +F+EM +G
Sbjct: 128 DILVEENHVKRA-IGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRG 186
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C PD +Y L+ GLC ++++A LL M +KG +V Y +L+ LC +
Sbjct: 187 CQPDSYTYGTLINGLCKLGKISQAKELLDEM----EEKGLSPSVVSYTSLIHGLCQSNNL 242
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A+++LE+++ G++ + C G + A L+ + R +P++ +YS
Sbjct: 243 DEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQ-AMELLEVMVRRRLLPNMVTYST 301
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L EG+ E ++LD MR +G P MY ++ L EA I +EM G
Sbjct: 302 LINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFI-DEMALG 360
Query: 362 TFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
P V+++N++++GLC+ + A M + V G T+ LV C
Sbjct: 361 GISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIG-TFDCLVKCFC 419
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ G +A+R+LEEM++ P +NVL+ GL
Sbjct: 420 KRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 290 RGGIPSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+G P++ S + + L NE + ++ EM +G P Y + L K G +
Sbjct: 149 KGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKIS 208
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A E+++E KG P+V Y L+ GLC + N A+ L++M G N TY
Sbjct: 209 QAKELLDEMEEKG-LSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN-GIEPNVFTYSS 266
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC+ G +A +LE M+ R P + TY+ LI GLC GK EAV L+ M Q
Sbjct: 267 LMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQG 326
Query: 469 KLPDISVWSSLVASVC--CN 486
PD ++ +++ +C CN
Sbjct: 327 LKPDAGMYGRIISGLCAACN 346
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
R ++ +V +M P+ Y L ++ V A+ +E KG PTV
Sbjct: 100 RPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKG-IPPTVVSL 158
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NIL+K LC + + L + GC + TYG L++GLC+ G+ +A +L+EM
Sbjct: 159 NILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEME 218
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P V +Y LI GLC EA+ LEEMI P++ +SSL+ +C
Sbjct: 219 EKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLC 272
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 30/489 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LL P +++ ++K QK+PL AL+IF K K ++H Y MI L M+
Sbjct: 3 PALL-PKHVAAVVKYQKNPLKALEIFNSVK-KEDGFKHTLLTYKGMIEKLGFHGEFEAME 60
Query: 66 EVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
EV+ + + + + V+ A+R Y R G++ EAV +F+ + FNC QS+N ++
Sbjct: 61 EVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNI 120
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ + AH +++R + + + + M C+ R A + M QGC
Sbjct: 121 LVEYRYFDQAHKVYMRM-RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCES 179
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y ++ G + EA L M G DI+ + L+ LC +G +Q++
Sbjct: 180 SAVAYCTVIGGFYEENHRVEAHELFEEMLGL----GICPDIMAFNKLIHTLCRKGHVQES 235
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG--AKSLINEALI------RGGIPSL 296
++L K+L++G+ +P I I+G ++++NEA+ RG P +
Sbjct: 236 ERLLNKVLKRGV-SPNLFTVNI---------FIQGFCQRAMLNEAIRLLDGVGRGLTPDV 285
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L ++VE + L +M +G+ P Y + + K GM+ A +++ +
Sbjct: 286 ITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD 345
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCR 415
KG FVP Y L+ GLC G+ A+ ++ + M K G N LV GL +
Sbjct: 346 GAFKG-FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK--GLKPNLVLCNTLVKGLSQ 402
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G L+A +++ EM P + TYN++I GLC IG +A + + I++ LPD+
Sbjct: 403 QGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFT 462
Query: 476 WSSLVASVC 484
+++L+ C
Sbjct: 463 FNTLIDGYC 471
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 214/472 (45%), Gaps = 15/472 (3%)
Query: 25 LTALKIFKEAKEKYPNYRHNG---PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECK 79
L + F +A + Y R G VY I + S ++R + +++ M CE
Sbjct: 121 LVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+ T I + EA LF+ + +FN L+ + ++ ++ + L L
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERL-L 239
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
V + ++N+ + CQ + A+ + + +G PD +Y+ L+ GLC +
Sbjct: 240 NKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKN 298
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
++ EA H L M +G D Y +++ C G +Q+A QIL KG
Sbjct: 299 FKVVEAEHYLRKMV----NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPD 354
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+S + C DG DI+ A ++ NEA+ +G P+L + + L +G I++ K++
Sbjct: 355 ESTYCSLINGLCQDG-DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLM 413
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+EM G P + Y + L K G V +A ++ + + KG +P V +N L+ G C
Sbjct: 414 NEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKG-HLPDVFTFNTLIDGYCK 472
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ + +M G + TY +++GLC+ G++ + + M+ + P +
Sbjct: 473 KLKLDNAIEIVDRMWNH-GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNII 531
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
TYN+L C K EA+ +EEM ++ PD+ + +L+ C N DL+
Sbjct: 532 TYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN-GDLD 582
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 194/429 (45%), Gaps = 11/429 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ ++ E + + +M + E + + I Y + G + A + ++
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V ++ +L+ + ++ ++ A +F +K + N L+ L Q
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVF-NEAMEKGLKPNLVLCNTLVKGLSQQGL 405
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL + EM GC PD +Y++++ GLC +++A +L+ KG D+
Sbjct: 406 ILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI----AKGHLPDVF 461
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLI 284
+ TL+ C + K+ +A++I++++ G+ + I LC ED+ G L+
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM 521
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E +G +P++ +Y+ + ++ E +++EM+ KG P +V + + +
Sbjct: 522 ME---KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +D A ++ + + F T+ YNI++ N +A KM + G +
Sbjct: 579 GDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN-GFSPDSY 637
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY +++DG C+ G L + + P + T+ ++ LC + +EAV + M
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLM 697
Query: 465 ISQAKLPDI 473
+ + +P++
Sbjct: 698 VHKGIVPEV 706
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 45/434 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
I+ + + LNEA+ L + + ++NTL+ + K K+ EA H L G+
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
E + N ++D C+ A + ++ F+G PD +Y L+ GLC D ++ A
Sbjct: 317 EPDGF--TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ F +KG ++V+ TL+ L QG I A++++ ++ G +
Sbjct: 375 INV----FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G + A +L+ +A+ +G +P + +++ + + ++ +++D M
Sbjct: 431 VINGLCKIG-CVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489
Query: 326 GFWPSLVMYEAKLAALFKDGM-----------------------------------VDEA 350
G P ++ Y + L L K G V+EA
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L +IEE KG P V + L+KG CD G+ A K++ +Q TY I++
Sbjct: 550 LNLIEEMQNKG-LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMI 608
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ A ++ +M + P TY V+I G C G +L I + +
Sbjct: 609 NAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLI 668
Query: 471 PDISVWSSLVASVC 484
P ++ + ++ +C
Sbjct: 669 PSLTTFGRVLNCLC 682
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 52/390 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ +F EA EK + N + +++ LS+ I + +++++M + C +
Sbjct: 374 AINVFNEAMEK--GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLV 431
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + G +++A +L + + +FNTL+ K+ KL+ A I + +
Sbjct: 432 INGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA-IEIVDRMWNHG 490
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N +++ LC+ + + + F+ M +GC P+ +Y+IL + C R++ EA
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL------------------ 248
+L+ M KG D+V + TL+ CD G + A Q+
Sbjct: 551 NLIEEM----QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNI 606
Query: 249 --------------EKILRKGLK---APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
EK+ K + +P S +R+ + +I S + + +G
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKG 666
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV--MYEAKLAALFKDGMVDE 349
IPSL ++ + L + R+ E ++ M KG P +V ++EA D
Sbjct: 667 LIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEA-------DKKEVA 719
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
A +++ E ++K + T Y IL G+ D
Sbjct: 720 APKIVVENLMKKGHI-TYFAYEILHDGIRD 748
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 224/476 (47%), Gaps = 15/476 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A + KE KE N Y+++I ++ ++ QM + C + T
Sbjct: 180 AYLLLKEMKES--GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ R G ++EA L + + S++TL+ + K K++ A +F + G +
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG-D 296
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L+ LC+ R D A +F++M C PD ++ LM GLC RL EA
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L +M + +++ Y +L+ LC G+++DA ++ ++++ +G++ + +
Sbjct: 357 QVLETM----EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412
Query: 267 --DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
C N ++ A L+ E G +P + +Y+ + L GR E +++ +M+
Sbjct: 413 IHGFCMTNG---VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 469
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
K P ++ Y + K +D A + ++M+K +P V ++ L++G C+AG
Sbjct: 470 KFCNPDVITYSCLIGGFCKLERIDMA-RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L++M C + TY LVDG C+ GR +EA RVL+ M R P V TY L
Sbjct: 529 DAERLLEEMVAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
I C GK A LEEM+ P++ + SL+ C T DL RK LE+L
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF-CGTGDLEEARKILERL 642
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 233/504 (46%), Gaps = 15/504 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMI--GILSESNRIT 62
WP +TP + + Q L +A E R +GPV + I ++ +
Sbjct: 51 WPPGITPNVFTYAVVIQG--LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKAR 108
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ +D + CE + I +A +L EA + F + + V ++N L+
Sbjct: 109 NTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLI 168
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K K+ A++L L+ + + + + ++ C+ + D A +F++M GC
Sbjct: 169 NGFCKVHKVHRAYLL-LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 227
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y+ L+ GLC + ++EA LL M ++G D Y TL+ LC GKI
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEM----RERGLQPDKFSYDTLMAGLCKTGKID 283
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+++ E G P + + ++ A L + P + +++A+
Sbjct: 284 MALKVFEDN-SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTAL 342
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L R+ E +VL+ M + P+++ Y + + L K G V +A EV + +V+G
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG- 401
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P V YN L+ G C A++ +++M+ GC+ + TY L+DGLC+ GR EA
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT-ATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+R+ +M + P V TY+ LI G C + + A ++M+ QA LPD+ +S+LV
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 483 VCCNTADLNVCRKTLEQL--SSCS 504
CN ++ + LE++ S CS
Sbjct: 521 Y-CNAGLVDDAERLLEEMVASDCS 543
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 211/462 (45%), Gaps = 12/462 (2%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
P AL+ F A K + HN Y + L + RI E ++
Sbjct: 3 DPDAALRFFHWAS-KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFT 61
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+A I+ ++G L++A L + + + V +N ++ + K ++ A + + RS
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCK-ARNTAKALDYFRS- 119
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
E + + + +++D LC+ R A F +M +G P+ +Y++L+ G C ++
Sbjct: 120 --MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL M + G ++V Y T++ C Q K+ A ++ +++ G
Sbjct: 178 HRAYLLLKEM----KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C +G ++ A L++E RG P SY + L G+I KV ++
Sbjct: 234 YNTLLSGLCRNGL-MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P +V Y +A L K G +DEA ++ E+ M + + P V + L+ GLC
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEK-MRENSCEPDVVTFTALMDGLCKGDR 351
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A L+ M + C N TY L+DGLC+ G+ +A V + M++R P V TYN
Sbjct: 352 LQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 410
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI G C A++ +EEM + LPDI +++L+ +C
Sbjct: 411 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 215/459 (46%), Gaps = 18/459 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGP----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
ALK+F++ N + P Y+++I L ++ R+ E ++ ++M+ +SCE
Sbjct: 285 ALKVFED------NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + + +L EA + + + NC ++++L+ + K ++ A +F R
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
++ + + N L+ C D AL + +EM GC PD +Y+ L+ GLC R
Sbjct: 399 VRG-IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 457
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA L F + K D++ Y L+ C +I A + + +L++ +
Sbjct: 458 PEANRL----FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 513
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN G ++ A+ L+ E + P + +Y+++ GR+VE +VL M
Sbjct: 514 FSTLVEGYCNAGL-VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P++V Y A + A + G A ++EE MV P V Y L+ G C G+
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE-MVGNGVQPNVITYRSLIGGFCGTGD 631
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A L+++ + C A+ Y +++DGLCR GR A +LE + P + Y
Sbjct: 632 LEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 691
Query: 443 VLIRGLCSIGKQYEAVMWLEEM-ISQAKLPDISVWSSLV 480
LIRGLC + +A+ LEEM +S+ P+ + +++
Sbjct: 692 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 227/466 (48%), Gaps = 17/466 (3%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
+ P + KIFK K +YR + S+I + +++V+D+MK + +
Sbjct: 67 EPDPPISDKIFKSG-PKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFE 125
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVKESKLEAA----- 134
F + Y +A +AV LF ++ +F C +SFN++L +++E A
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYN 185
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
H++ + G + + + NL++ +C+ D A+ VF++M + C PD +Y LM
Sbjct: 186 HVIGAK---GVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMD 242
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC R++EA LL M G V + L+ LC +G + A ++++ + K
Sbjct: 243 GLCKADRIDEAVSLLDEM----QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK 298
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C G+ +E A SL++ + +P++ +Y + L +GR ++
Sbjct: 299 GCIPNEVTYNTLIHGLCLKGK-LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD 357
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G VL M +G+ + +Y ++ LFK+G EA+ + +E VKG + T+ VY+ ++
Sbjct: 358 GACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTI-VYSAVI 416
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G AV L +M+ + GC N T L+ G G A V ++M ++
Sbjct: 417 DGLCRDGKPDDAVEVLSEMTNK-GCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNF 475
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
Y+VLI GLC GK EA+M +M+ + PD+ +SS++
Sbjct: 476 TQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMI 521
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 162/408 (39%), Gaps = 80/408 (19%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNC---VNWTQSFNTLLKEMVKESKLEAAHI 136
DS F + I YA G SL K L + C V + + F + K K E A
Sbjct: 90 DSTFYSLINNYANLGDFK---SLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVD 146
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
LF R +E K +S N +++V + QE F
Sbjct: 147 LFDRMACEFECKRTGKSFNSVLNV------------IIQEGLFH---------------- 178
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R L H++ + IS +++ + ++ A+C G + DA+Q+
Sbjct: 179 ---RALEFYNHVIGAKGVSIS-----PNVLTFNLVIKAMCKVGLVDDAIQVFR------- 223
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ IR P + +Y + L RI E
Sbjct: 224 -----------------------------DMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+LDEM+ G +PS V + + L K G + A ++++ +KG +P YN L+ G
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGC-IPNEVTYNTLIHG 313
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC G A+ L +M CV N TYG +++GL + GR L+ + VL M R Y
Sbjct: 314 LCLKGKLEKAISLLDRMVSS-KCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV 372
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+ LI GL GK EA+ +EM + + V+S+++ +C
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLC 420
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T +S + K+ KS A+ +FKE K Y N VY+++I L + + EV+ +M
Sbjct: 379 TLISGLFKEGKSQ-EAMHLFKEMTVK--GYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM 435
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
C ++ ++ + AG + AV ++K++++ N +TQ+
Sbjct: 436 TNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHN---FTQN-------------- 478
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
CY ++L+ LC+ + A+ V+ +M +GC PD +Y
Sbjct: 479 --------EVCY-----------SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSS 519
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ GL + +A L M + S D+V Y LL LC Q I A+ +L +
Sbjct: 520 MINGLSIAGLVEDAMQLYNEMLCQ--GPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSM 577
Query: 252 LRKG 255
L +G
Sbjct: 578 LDRG 581
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 211/455 (46%), Gaps = 48/455 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + + + Y SMI +L ++ R++E +E+ QM+ + + T
Sbjct: 271 AWKFFHELKSQ--GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AGQ A L L + C+ SFN++L + K+ K++ A LF +
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF--EAMKKD 386
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+++D+LC + + A + EM+ G +P+ + +I++ LC ++ A
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA- 445
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y MF SQ+G + V Y +L+ L +G + DA ++ E +L G
Sbjct: 446 ---YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG----------- 491
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
A ++ +LIR + + GR +G K+ EM +G
Sbjct: 492 -----------HNANPVVYTSLIR--------------NFFMHGRKEDGHKIFKEMNRRG 526
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG-TFVPTVRVYNILLKGLCDAGNSAV 385
P L + + +FK G V++ + E+ +KG F+P VR Y+IL+ GL AG +
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFED--IKGYGFLPDVRSYSILIHGLTKAGQARE 584
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
M KQ G + Y +VDG C+ G+ +A VLEEM ++ P V TY +I
Sbjct: 585 TSSIFHAM-KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSII 643
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S+ ++ V+SSL+
Sbjct: 644 DGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLI 678
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 51/434 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ + E+ + C + + I + G +++A LF+N+
Sbjct: 432 MVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +L++ + E H +F R C + + LN MD + +
Sbjct: 492 HNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC-----QPDLTLLNTYMDCVFKAGD 546
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ +F+++ G PD SY IL+ GL + E + + ++M Q+G D
Sbjct: 547 VEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM----KQQGFALDAR 602
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ C GK+ A ++LE++ ++ P
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEM-------------KVKRVP---------------- 633
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++A+Y ++ L R+ E + +E ++KG ++++Y + + K G
Sbjct: 634 -------PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA ++EE M KG P V +N L+ L A A++ + M K++ C N TY
Sbjct: 687 IDEAYLILEEMMKKG-LTPNVYTWNSLMDALVKAEEINEALICFQSM-KEMKCSPNTYTY 744
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++GLCR ++ +A +EM + P V TY +I GL +G +A E +
Sbjct: 745 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804
Query: 467 QAKLPDISVWSSLV 480
PD + +++L+
Sbjct: 805 NGGTPDAASFNALI 818
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 45/298 (15%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
IF K++ + + Y +++ +S ++ + EV+++MK + + + I
Sbjct: 588 IFHAMKQQ--GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
A+ +L+EA LF+ +++L+ K +++ A+ L L +
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY-LILEEMMKKGLTP 704
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + N LMD L + + AL FQ M C P+ +Y IL+ GLC ++ N+A
Sbjct: 705 NVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF--- 761
Query: 210 YSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+FW+ QK G ++V Y T++ L G I DA + E+ KA
Sbjct: 762 --VFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER-----FKA---------- 804
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
GG P AS++A+ + + R +E V +E R KG
Sbjct: 805 ---------------------NGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 295 SLASYSAMAIDLYN------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
S AS + D YN + +KVL+EM G+ ++AL + +D
Sbjct: 105 SAASPHPLPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLD 164
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A VI M + F P Y +L+ + +A A+ L++M ++VG +
Sbjct: 165 DAERVIAA-MRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM-QEVGYEVGVPLFTT 222
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
LV L R+GR A +++E+ P + YNV I G A + E+ SQ
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQG 282
Query: 469 KLPDISVWSSLVASVC 484
PD ++S++ +C
Sbjct: 283 LKPDDVSYTSMIWVLC 298
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 224/476 (47%), Gaps = 15/476 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A + KE KE N Y+++I ++ ++ QM + C + T
Sbjct: 61 AYLLLKEMKES--GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 118
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ R G ++EA L + + S++TL+ + K K++ A +F + G +
Sbjct: 119 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG-D 177
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L+ LC+ R D A +F++M C PD ++ LM GLC RL EA
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L +M + +++ Y +L+ LC G+++DA ++ ++++ +G++ + +
Sbjct: 238 QVLETM----EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293
Query: 267 --DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
C N ++ A L+ E G +P + +Y+ + L GR E +++ +M+
Sbjct: 294 IHGFCMTNG---VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 350
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
K P ++ Y + K +D A + ++M+K +P V ++ L++G C+AG
Sbjct: 351 KFCNPDVITYSCLIGGFCKLERIDMA-RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L++M C + TY LVDG C+ GR +EA RVL+ M R P V TY L
Sbjct: 410 DAERLLEEMVAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
I C GK A LEEM+ P++ + SL+ C T DL RK LE+L
Sbjct: 469 IDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF-CGTGDLEEARKMLERL 523
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 216/459 (47%), Gaps = 18/459 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGP----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
ALK+F++ N + P Y+++I L ++ R+ E ++ ++M+ +SCE
Sbjct: 166 ALKVFED------NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + + +L EA + + + NC ++++L+ + K ++ A +F R
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
++ + + N L+ C D AL + +EM GC PD +Y+ L+ GLC R
Sbjct: 280 VRG-IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 338
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA L F + K D++ Y L+ C +I A + + +L++ +
Sbjct: 339 PEANRL----FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 394
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN G ++ A+ L+ E + P + +Y+++ GR+VE +VL M
Sbjct: 395 FSTLVEGYCNAGL-VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P++V Y A + A + G A +++EE MV P V Y L+ G C G+
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE-MVGNGVQPNVITYRSLIGGFCGTGD 512
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A L+++ + C A+ Y +++DGLCR GR A +LE + P + Y
Sbjct: 513 LEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 572
Query: 443 VLIRGLCSIGKQYEAVMWLEEM-ISQAKLPDISVWSSLV 480
LIRGLC + +A+ LEEM +S+ P+ + +++
Sbjct: 573 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 207/432 (47%), Gaps = 13/432 (3%)
Query: 77 ECKDSVFA--TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
EC+ +V I +A +L EA + F + + V ++N L+ K K+ A
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
++L L+ + + + + ++ C+ + D A +F++M GC P+ +Y+ L+
Sbjct: 62 YLL-LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + ++EA LL M ++G D Y TL+ LC GKI A+++ E
Sbjct: 121 GLCRNGLMDEAYELLDEM----RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ C G E K L + P + +++A+ L R+ E
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACK-LFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+VL+ M + P+++ Y + + L K G V +A EV + +V+G P V YN L+
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNSLI 294
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C A++ +++M+ GC+ + TY L+DGLC+ GR EA+R+ +M +
Sbjct: 295 HGFCMTNGVDSALLLMEEMT-ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 353
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P V TY+ LI G C + + A ++M+ QA LPD+ +S+LV CN ++
Sbjct: 354 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY-CNAGLVDDAE 412
Query: 495 KTLEQL--SSCS 504
+ LE++ S CS
Sbjct: 413 RLLEEMVASDCS 424
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 238/482 (49%), Gaps = 21/482 (4%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRI 61
++W + + ++Q+IK ++ A+ IF A +Y N +RH+ ++ MI L +N
Sbjct: 7 IKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHF 66
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+E++ +MK + C + +F + R Y R + +AV +F+ + ++ C +S+ T+
Sbjct: 67 RLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITV 126
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQ 180
+V E++L+ A + F R + + SLN+L+ LC+ + D AL +F+EM +
Sbjct: 127 FAILVGENQLKLA-LRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNR 185
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD +Y L+ GLC ++ EA L F + K +V Y +L+ LC
Sbjct: 186 GCPPDSYTYGTLINGLCRLGKIGEAKEL----FKEMETKACSPTVVTYTSLIHGLCQSKD 241
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+++LE++ KG+K + C G A L++ + R +P++ +YS
Sbjct: 242 LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCS-SRALELLDMMVSRRHLPNMITYS 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG++ E ++LD M+ +G P +Y ++ EA + +EMV
Sbjct: 301 TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFL-DEMVL 359
Query: 361 GTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
G P VR++NI+++GLC + +YL ++ G + +T+ LV+
Sbjct: 360 GGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTR--GISIDAKTFDSLVNYF 417
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA--VMWLEEMISQAKL- 470
C G +A+ +++EM++ P T+N ++ K E+ ++ +E M+ K+
Sbjct: 418 CNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEHRKMG 477
Query: 471 PD 472
PD
Sbjct: 478 PD 479
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 45/310 (14%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIVIY 228
A+ VF++M C P ++SY + L + +L A F+R + + G +
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALR-----FYRYMREMGIPPSVASL 158
Query: 229 RTLLFALC-DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
L+ ALC + G + A++I ++ +G CP
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRG-------------CP----------------- 188
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P +Y + L G+I E ++ EM TK P++V Y + + L + +
Sbjct: 189 ------PDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDL 242
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D A+ ++EE KG P V Y+ L+ G C +G S+ A+ L M + + N TY
Sbjct: 243 DSAIRLLEEMASKG-IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRH-LPNMITYS 300
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LV GLC++G+ EA +L+ M ++ P Y +I G C I K +EA +L+EM+
Sbjct: 301 TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLG 360
Query: 468 AKLPDISVWS 477
P+ WS
Sbjct: 361 GISPNRLTWS 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Query: 291 GGIPSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G PS+AS + + L N G + ++ EM +G P Y + L + G + E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGE 209
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+ +E K PTV Y L+ GLC + + A+ L++M+ + G N TY L
Sbjct: 210 AKELFKEMETKAC-SPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK-GIKPNVFTYSSL 267
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ G A +L+ M+ R + P + TY+ L+ GLC GK EAV L+ M Q
Sbjct: 268 MDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL 327
Query: 470 LPDISVWSSLVASVC 484
PD ++ +++ C
Sbjct: 328 RPDAGLYGKIISGFC 342
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 310 GRI---VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ ++ +V +M+ PS Y A L + + AL M + P+
Sbjct: 96 GRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRY-MREMGIPPS 154
Query: 367 VRVYNILLKGLC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V N+L+K LC ++G A+ ++M + GC + TYG L++GLCR G+ EA +
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNR-GCPPDSYTYGTLINGLCRLGKIGEAKEL 213
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM ++ P V TY LI GLC A+ LEEM S+ P++ +SSL+ C
Sbjct: 214 FKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHC 272
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 231/477 (48%), Gaps = 13/477 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LL P +++ +IK QK P+ AL++F + K ++H Y S+I L + M+
Sbjct: 3 PPLL-PKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 66 EVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
EV+ M+ + + V+ A++ Y R G++ EAV++F+ + ++C S+N ++
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V + AH +++R + + S + M C+ R AL + M QGC
Sbjct: 121 LVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + E Y +F ++ G + + LL LC +G +++
Sbjct: 180 NVVAYCTVVGGFYEENFKAEG----YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++L+K++++G+ + C GE ++GA ++ + +G P + +Y+ +
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + E + L +M +G P Y +A K GMV A ++ + + G FV
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FV 353
Query: 365 PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y L+ GLC G + A+ ++ + + K G N Y L+ GL G LEA+
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++ EM + P V+T+N+L+ GLC +G +A ++ MIS+ PDI ++ L+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 216/478 (45%), Gaps = 42/478 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ +L +S + +V +M+ F ++++ + + + A+ L N+S
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++ T++ +E+ + LF + V + + N L+ VLC+
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML-ASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ ++ +G P+ +Y++ ++GLC L+ A ++ + ++G D++
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVIT 288
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L++ LC K Q+A L K++ +GL+ P S + + G ++ A+ ++ +A
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLE-PDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G +P +Y ++ L +EG + +E KG P++++Y + L GM+
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG-----NSAVAVMYLK----------- 391
EA ++ E KG +P V+ +NIL+ GLC G + V VM K
Sbjct: 408 LEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 392 ---------KMSKQV---------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
KM + G + TY L++GLC+ +F + + M+ +
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
P + T+N+L+ LC K EA+ LEEM +++ PD + +L+ C N DL+
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN-GDLD 583
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 210/510 (41%), Gaps = 48/510 (9%)
Query: 31 FKEAKEKYPNYRHNG---PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F +A + Y R G VY+ I + S +++R +++ M CE + T
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + E LF + +FN LL+ + K+ ++ L L
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL-LDKVIKR 245
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + + NL + LCQ D A+ + + QG PD +Y+ L+ GLC + + EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK-SRRH 264
L ++ +G D Y TL+ C G +Q A +I+ + G + + R
Sbjct: 306 EVYL----GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
ID C++GE A +L NEAL +G P++ Y+ + L N+G I+E ++ +EM
Sbjct: 362 LIDGL-CHEGE-TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-------------------- 364
KG P + + + L K G V +A +++ + KG F
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 365 --------------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
P V YN LL GLC + K M ++ GC N T+ IL+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILL 538
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ LCR + EA +LEEM +S P T+ LI G C G A +M K+
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ +++ ++ + K +++
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 222/557 (39%), Gaps = 92/557 (16%)
Query: 7 RLLTPTYLSQIIK-----KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
R +TP S I+ K P AL++ + N Y +++G E N
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ--GCEMNVVAYCTVVGGFYEENFK 197
Query: 62 TEMKEVIDQM---------------------KGDSCECK---DSV-----------FATA 86
E E+ +M KGD EC+ D V +
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ + G+L+ AV + L + ++N L+ + K SK + A + +L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV-YLGKMVNEG 316
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + N L+ C+ LA + + F G PD+ +Y L+ GLC++ N A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++F KG ++++Y TL+ L +QG I +A Q+ ++ KGL P+ + I
Sbjct: 377 ----ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL-IPEVQTFNI 431
Query: 267 ---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
LC D +G L+ + +G P + +++ + + ++ ++LD M
Sbjct: 432 LVNGLCKMGCVSDADG---LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P + Y + L L K ++ +E + + KG P + +NILL+ LC
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC-APNLFTFNILLESLCRYRKL 547
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG-------------------------- 417
A+ L++M K + T+G L+DG C++G
Sbjct: 548 DEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 418 ----RFLE------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
F E A ++ +EM+ R P TY +++ G C G +L EM+
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 468 AKLPDISVWSSLVASVC 484
+P ++ ++ +C
Sbjct: 667 GFIPSLTTLGRVINCLC 683
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 197/434 (45%), Gaps = 23/434 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++++ E + + +M + E + T I Y + G + A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD- 346
Query: 107 SQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ FN Q ++ +L+ + E + A LF G +K + N L+ L
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALF-NEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A + EM +G P+ ++++IL+ GLC +++A L+ M KG DI
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI----SKGYFPDI 461
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDI-EGAKS 282
+ L+ Q K+++A++IL+ +L G+ + + LC + ED+ E K+
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++ +G P+L +++ + L ++ E +L+EM+ K P V + +
Sbjct: 522 MVE----KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 343 KDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K+G +D A + +EE + PT YNI++ + N +A ++M + C
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDR--C 632
Query: 400 VA-NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ +G TY ++VDG C+ G + L EM+ + P + T +I LC + YEA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 459 MWLEEMISQAKLPD 472
+ M+ + +P+
Sbjct: 693 GIIHRMVQKGLVPE 706
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+G++ E V + M P++ Y A ++ L G D+A +V +G P V
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-ITPDVY 147
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG---------------- 412
+ I +K C A+ L MS Q GC N Y +V G
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 413 -------------------LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
LC+ G E ++L++++ R P + TYN+ I+GLC G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
AV + +I Q PD+ +++L+ +C N+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 44/342 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F EA K + N +Y ++I LS I E ++ ++M + F
Sbjct: 375 ALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G +++A L K + +FN L+ + K+E A + L
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA-LEILDVMLDNG 491
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N L++ LC+ + + + ++ M +GC P+ +++IL++ LC R+L+EA
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK--------- 257
LL M K D V + TL+ C G + A + K + + K
Sbjct: 552 GLLEEM----KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK-MEEAYKVSSSTPTYN 606
Query: 258 --------------APKSRRHRIDLCPCNDG-------------EDIEGAKSLINEALIR 290
A K + +D C DG ++ + E +
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G IPSL + + L E R+ E ++ M KG P V
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 200/437 (45%), Gaps = 38/437 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I L R+ E V+++ CE + I +A ++++A L K +
Sbjct: 10 FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C+ T ++ L+ ++K +L+ A + L +++ +++D L + R
Sbjct: 70 EKKCLPTTVTYTALVDGLLKAGRLDEA-MAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A +F +M GC PD Y L+KGLC + EA L R + D+V
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y +L+ LC G+I +A Q+ + +EA
Sbjct: 189 YTSLIDGLCKAGRILEARQVFD-----------------------------------DEA 213
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ RG IP +Y+++ L GR+ EG + EMR +G+ P V Y A + K M+
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 273
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A V + + GT V TV YNI+L GLC AG A A M ++ GCVA TY
Sbjct: 274 PKAHRVYRQMLQSGTVVSTV-TYNIILDGLCKAGRVAEAYATFLAMEER-GCVATVVTYS 331
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DG C +G A + ML R P + +YN++IRGLC GK +A + E+++ +
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391
Query: 468 AKLPDISVWSSLVASVC 484
PD+ +++ + +C
Sbjct: 392 RLCPDVYTFNAFLHGLC 408
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 45/303 (14%)
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C PD ++ +++ GLC ++RL+EA +S+ R + G D V Y + LC ++
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEA----FSVLERAVRAGCEPDYVTYNVFIDGLCKAERV 58
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA Q+L+K+ K +P+ +Y+A
Sbjct: 59 DDAFQLLKKMDEKKC------------------------------------LPTTVTYTA 82
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L GR+ E VL++M KG P+L Y + L K G V+EA + + + G
Sbjct: 83 LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS---KQVGCVANGETYGILVDGLCRDGR 418
P VY L+KGLC +G A K+ + V + TY L+DGLC+ GR
Sbjct: 143 C-RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGR 201
Query: 419 FLEASRVL-EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
LEA +V +E + R + P TY +I GLC +G+ E EM ++ PD ++
Sbjct: 202 ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261
Query: 478 SLV 480
+L+
Sbjct: 262 ALI 264
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 45/267 (16%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
F E + + Y + YA++I ++ I + V QM + +
Sbjct: 245 FHEMRNR--GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+AG++ EA + F + + CV +++ L+ E + AA LF R +
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF-RRMLDRGCEPN 361
Query: 151 IQSLNLLMDVLCQ---------------------------------CRRSDL---ALHVF 174
+ S N+++ LC+ C+R D + +F
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M QG P+ SY ILM G+C L A + M R G D+V++ TL+
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSR----GVAPDVVVFNTLIRW 477
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKS 261
LC G++ +A+++ ++ R+ AP +
Sbjct: 478 LCIAGRVDEALEVFRELERR--SAPDA 502
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 224/452 (49%), Gaps = 18/452 (3%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRI 61
++W + + ++Q+IK ++ A+ IF A +Y N +RH+ ++ MI L +N
Sbjct: 7 IKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHF 66
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+E++ +MK + C + +F + R Y R + +AV +F+ + ++ C +S+ T+
Sbjct: 67 RLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITV 126
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQ 180
+V E++L+ A + F R + + SLN+L+ LC+ + D AL +F+EM +
Sbjct: 127 FAILVGENQLKLA-LRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNR 185
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P +Y L+ GLC ++ EA L F + K +V Y +L+ LC
Sbjct: 186 GCPPHSYTYGTLIXGLCRLGKIGEAKEL----FKEMETKACSPTVVTYXSLIHGLCQSKD 241
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+++LE++ KG+K + C G A L++ + R +P++ +YS
Sbjct: 242 LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCS-SRALELLDMMVSRRHLPNMITYS 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG++ E ++LD M+ +G P +Y ++ EA + +EMV
Sbjct: 301 TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFL-DEMVL 359
Query: 361 GTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
G P VR++NI+++GLC + +YL ++ G + +T+ LV+
Sbjct: 360 GGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTR--GISIDAKTFDSLVNYF 417
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
C G +A+ +++EM++ P T+N ++
Sbjct: 418 CNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVV 449
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 45/310 (14%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIVIY 228
A+ VF++M C P ++SY + L + +L A F+R + + G +
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALR-----FYRYMREMGIPPSVASL 158
Query: 229 RTLLFALC-DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
L+ ALC + G + A++I ++ +G CP
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRG-------------CP----------------- 188
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P +Y + L G+I E ++ EM TK P++V Y + + L + +
Sbjct: 189 ------PHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDL 242
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D A+ ++EE KG P V Y+ L+ G C +G S+ A+ L M + + N TY
Sbjct: 243 DSAIRLLEEMASKG-IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRH-LPNMITYS 300
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LV GLC++G+ EA +L+ M ++ P Y +I G C I K +EA +L+EM+
Sbjct: 301 TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLG 360
Query: 468 AKLPDISVWS 477
P+ WS
Sbjct: 361 GISPNRLTWS 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Query: 291 GGIPSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G PS+AS + + L N G + ++ EM +G P Y + L + G + E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGE 209
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+ +E K PTV Y L+ GLC + + A+ L++M+ + G N TY L
Sbjct: 210 AKELFKEMETKAC-SPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK-GIKPNVFTYSSL 267
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ G A +L+ M+ R + P + TY+ L+ GLC GK EAV L+ M Q
Sbjct: 268 MDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL 327
Query: 470 LPDISVWSSLVASVC 484
PD ++ +++ C
Sbjct: 328 RPDAGLYGKIISGFC 342
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 310 GRI---VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ ++ +V +M+ PS Y A L + + AL M + P+
Sbjct: 96 GRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRY-MREMGIPPS 154
Query: 367 VRVYNILLKGLC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V N+L+K LC ++G A+ ++M + GC + TYG L+ GLCR G+ EA +
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNR-GCPPHSYTYGTLIXGLCRLGKIGEAKEL 213
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM ++ P V TY LI GLC A+ LEEM S+ P++ +SSL+ C
Sbjct: 214 FKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHC 272
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 240/488 (49%), Gaps = 19/488 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P +++ ++K Q PL AL++F AK + ++H Y ++ L EM++
Sbjct: 3 RTLLPKHVAAVVKIQTDPLKALEMFNSAKSE-DGFKHTASTYKCIVQKLGHHGEFEEMEK 61
Query: 67 VIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ + + + + A++ Y R G++ EAV F+ + +NC S N ++ +
Sbjct: 62 LLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNIL 121
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+ AH +++R V+S + + + + C+ R AL + + M GC +
Sbjct: 122 VEFGYHNQAHKVYMRM-RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSN 180
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++ GL + + A L M R D+V + L+ LC +G + ++
Sbjct: 181 AVAYCTVVAGLYDSGEHDHARELFDEMLARCL----CPDVVAFNKLVHVLCKKGLVFESE 236
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP-CNDGE-DIEGAKSLINEA------LIRGGI-PSL 296
++L K+L++G+ P I + C +G D S + EA ++ GG P
Sbjct: 237 RLLGKVLKRGV-CPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDD 295
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+++ +G + + ++VL + KGF P Y + + KDG D A+ V ++
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+ KG P++ +YN L+KGL G A+ + +M++ GC+ N TY ++++GLC+
Sbjct: 356 GLGKG-LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN-GCLPNIWTYNLVINGLCKM 413
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +AS ++++ + + P + TYN LI G C K A + M SQ PD+ +
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473
Query: 477 SSLVASVC 484
++L+ +C
Sbjct: 474 NTLLNGLC 481
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 207/445 (46%), Gaps = 15/445 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +++ IL E + +V +M+ + + I+++ + + A+ L +N+
Sbjct: 114 HNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP 173
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ C + ++ T++ + + + A LF L C +V + N L+ VLC+
Sbjct: 174 ELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDV----VAFNKLVHVLCKK 229
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN----DRRLNEATHLLYSMFWRISQKG 220
+ + ++ +G P+ +++I ++GLC DR + + + + R G
Sbjct: 230 GLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNG 289
Query: 221 SGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
E D + Y +++ C +G +QDA ++L+ + KG K + + C DG D +
Sbjct: 290 GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDG-DPDR 348
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A ++ + L +G PS+ Y+ + L +G I+ ++++EM G P++ Y +
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G V +A ++++ + KG P + YN L+ G C A + +M Q G
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGC-PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ-GM 466
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY L++GLC+ G+ E + + M + P + TYN+++ LC K EAV
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L EM S+ PD+ + +L C
Sbjct: 527 LLGEMKSKGLKPDVVSFGTLFTGFC 551
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 190/419 (45%), Gaps = 15/419 (3%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN--LSQFNCVNWT 115
++R+ E +E + +M E D + + I Y + G + +A + K+ F +T
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFT 332
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+ +L+ K+ + A +F + G ++ I N L+ L Q AL +
Sbjct: 333 --YCSLINGFCKDGDPDRAMAVF-KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
EM GC P+ +Y++++ GLC +++A+HL+ KG DI Y TL+
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI----AKGCPPDIFTYNTLIDGY 445
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGI 293
C Q K+ A +++ ++ +G+ + + LC E++ + E +G
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE---KGCT 502
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + L ++ E +L EM++KG P +V + K G +D A ++
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ T YNI++ + N +A M L + K GC + TY +++DG
Sbjct: 563 FRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA-MKLFSVMKNSGCDPDNYTYRVVIDGF 621
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ G + + L E + + + P + T+ ++ LC K +EAV + M+ + +P+
Sbjct: 622 CKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 205/509 (40%), Gaps = 53/509 (10%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K P AL++ + E N Y +++ L +S +E+ D+M C C
Sbjct: 158 KTARPYAALRLLRNMPEL--GCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLA-RCLCP 214
Query: 80 DSV-FATAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA--- 134
D V F + + G + E+ L K L + C N +FN ++ + +E L+ A
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLF-TFNIFVQGLCREGALDRAVRN 273
Query: 135 -HIL----FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ +LR + + N ++D C+ A V ++ F+G PD +Y
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
L+ G C D + A ++F KG IV+Y TL+ L QG I A+Q++
Sbjct: 334 CSLINGFCKDGDPDRAM----AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389
Query: 250 KILRKG-----------------LKAPKSRRHRID-----LCPCN--------DGE---- 275
++ G + H +D CP + DG
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A ++N +G P + +Y+ + L G+ E ++ M KG P+++ Y
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ +L K V+EA++++ E KG P V + L G C G+ A ++M K
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKG-LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK 568
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
Q TY I+V A ++ M P TY V+I G C +G
Sbjct: 569 QYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNIT 628
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +L E + + +P ++ + ++ +C
Sbjct: 629 QGYKFLLENMEKRFIPSLTTFGRVLNCLC 657
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L ++ + E+ E+ M+ C + + + +A ++NEAV L +
Sbjct: 472 TYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEM 531
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SF TL K ++ A+ LF R ++V + N+++ +
Sbjct: 532 KSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLN 591
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++A+ +F M GC PD +Y +++ G C + + Y +K +
Sbjct: 592 MNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQG----YKFLLENMEKRFIPSLT 647
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ +L LC + K+ +A+ I+ +L+KG+
Sbjct: 648 TFGRVLNCLCVKDKVHEAVGIIHLMLQKGI 677
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 227/474 (47%), Gaps = 11/474 (2%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
+IFK A + +Y+ + S+I + S + +V D+MK + + F R
Sbjct: 49 QIFKSASQ-MGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFR 107
Query: 89 TYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG-WE 146
Y +A +A+ LF + + +F C +SFN++L +++E A + G
Sbjct: 108 AYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 167
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S NL++ +C+ D A+ VF+EM Q C PD +Y LM GLC + R++EA
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M +G V + L+ LC +G + ++++ + KG + + I
Sbjct: 228 LLLDEM----QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ ++ A SL++ + +P+ +Y + L +GR V+G +L + +G
Sbjct: 284 INGLCLKGK-LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ Y ++ LFK+ +EA+ + ++ + KG P + VY+ L+ GLC G A
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC-QPNIVVYSALIDGLCREGKLDEA 401
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +M + GC N TY L+ G + G +A RV +EM + P Y+VLI
Sbjct: 402 KEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIH 460
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
GLC GK EA+M M+ + PD+ +SS++ + CN + V K ++
Sbjct: 461 GLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL-CNAGSVEVGLKLFNEM 513
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 143/349 (40%), Gaps = 72/349 (20%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T +S + K++KS A+ ++K+ EK + N VY+++I L ++ E KE++ +M
Sbjct: 352 TLISGLFKEEKSE-EAMGLWKKMVEK--GCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
C +++ I+ + + G +A+ ++K +++ NCV ++ L+ + ++ KL
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
A + ++ M +G PD +Y
Sbjct: 469 REA------------------------------------MMMWTHMLGRGLRPDVVAYSS 492
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ GLCN + L M + S S D+V Y LL ALC Q I A+ +L +
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESD--SQPDVVTYNILLRALCKQNSISHAIDLLNSM 550
Query: 252 LRKGLKAP--------KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
L +G + R +++ P DG + ++E ++R
Sbjct: 551 LDRGCNPDLITCNIFLNALREKLN--PPQDG------REFLDELVVR------------- 589
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
L+ RIV K+++ M K P+ +E + L K V ++
Sbjct: 590 --LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 636
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 236/494 (47%), Gaps = 10/494 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I++Q++ AL+IF A + +P + HN Y ++I LS + +
Sbjct: 46 WPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPV 105
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ +++ C + +F T IR+Y A + A+ F + F +S NTLL
Sbjct: 106 ESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNA 165
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ ++ + H+LF S + V + + N+L+ LC+ + A VF EM G P
Sbjct: 166 LVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVP 225
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + + A + +F G D Y L+ QG+ DA
Sbjct: 226 NVVTYTTILGGYVSRGDMIGAKRVFGELF----DHGWLPDATTYTILMDGYVKQGRFTDA 281
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++++++ G++ I L C + + E A +L+N+ L + IP+ A +
Sbjct: 282 VKVMDEMEENGVEPNDITYGVIILGYCKERKSGE-ALNLLNDMLEKKYIPNSALCCKVID 340
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L EGR+ E K+ +++ K P + + L K+G + EA ++ E +GT +
Sbjct: 341 VLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLF-NEFERGT-I 398
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
++ YN L+ G+C+ G A M ++ GCV N TY +L+ G + G+ E +
Sbjct: 399 SSLLTYNTLIAGMCEMGELCEAARLWDDMLEK-GCVPNEFTYNMLIKGFLKVGKAKEVIK 457
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V+EEML + TY +L+ GL +GK+ E + L +IS + D W+ V
Sbjct: 458 VVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV-DFKAWNLFVPHFV 516
Query: 485 CNTAD-LNVCRKTL 497
N + N+ K L
Sbjct: 517 SNVNEQANILEKIL 530
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 237/499 (47%), Gaps = 54/499 (10%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
+IFK + +Y+ + S+I + S ++EV+ QMK + + F +
Sbjct: 46 EIFKSGTQ-MGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFK 104
Query: 89 TYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSC 142
Y +A +AV LF + +F C +SFN++L +V+E A H++ +S
Sbjct: 105 AYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKS- 163
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + NL++ +C+ D A+ VF+E+ + C PD +Y LM GLC + R+
Sbjct: 164 --LNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA LL M +G+ ++V + L+ ALC +G + A ++++ + KG +
Sbjct: 222 DEAVSLLDEM----QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVT 277
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL--- 319
+ + C G+ +E A SL+N+ + +P+ ++ + +GR +G +VL
Sbjct: 278 YNALVHGLCLKGK-LEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336
Query: 320 --------------------------------DEMRTKGFWPSLVMYEAKLAALFKDGMV 347
EM KG P+ ++Y A + L ++G +
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA + E KG ++P Y+ L++G +AG+S A++ K+M+ C+ N Y
Sbjct: 397 DEARGFLSEMKNKG-YLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANN-NCIHNEVCYS 454
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL++GLC+DG+F+EA V ++ML R V Y+ +I G C+ + + +M+ Q
Sbjct: 455 ILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ 514
Query: 468 AKL--PDISVWSSLVASVC 484
+ PD+ ++ L+ + C
Sbjct: 515 GPVVQPDVITYNILLNAFC 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 188/419 (44%), Gaps = 14/419 (3%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
NR E + K + F I+ R G +++A+ +F+ + NC ++
Sbjct: 149 NRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTY 208
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQE 176
+TL+ + KE +++ A + L + + N+L+ L C++ DL A +
Sbjct: 209 STLMHGLCKEERIDEA-VSLLDEMQVEGTFPNLVAFNVLISAL--CKKGDLGRAAKLVDN 265
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +GC P+ +Y+ L+ GLC +L +A LL M +S K D V + TL+
Sbjct: 266 MFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM---VSNKCVPND-VTFGTLINGFV 321
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
QG+ D ++L + +G + + + C +G+ A L E + +G P+
Sbjct: 322 MQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK-FNQAMELWKEMVGKGCGPNT 380
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
YSA+ L EG++ E L EM+ KG+ P+ Y + + F+ G +A+ ++ +
Sbjct: 381 IVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAI-LVWK 439
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
EM + Y+IL+ GLC G A+M K+M + G + Y ++ G C
Sbjct: 440 EMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSR-GIKLDVVAYSSMIHGFCNA 498
Query: 417 GRFLEASRVLEEMLIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+ ++ +ML + P V TYN+L+ C + A+ L M+ Q PD
Sbjct: 499 NLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDF 557
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 200/466 (42%), Gaps = 38/466 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++F+E + N + Y++++ L + RI E ++D+M+ + F
Sbjct: 189 AIEVFREIPLR--NCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVL 246
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + G L A L N+ CV ++N L+ + + KLE A L +
Sbjct: 247 ISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKC 306
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + L+ + Q R SD V ++ +G + Y L+ GLC + + N+A
Sbjct: 307 VPNDVTFGTLINGFVMQGRASD-GTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365
Query: 207 HLLYSMFWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L W+ + KG G + ++Y L+ LC +GK+ +A L ++ KG P S +
Sbjct: 366 EL-----WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY-LPNSFTYS 419
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + D A + E I + YS + L +G+ +E V +M ++
Sbjct: 420 SLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSR 479
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSA 384
G +V Y + + +V++ L++ + + +G V P V YNILL C +
Sbjct: 480 GIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIF 539
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGL------CRDGRFLEASRVLEEMLIRSYWPCV 438
A+ L M Q GC + T I + L +DGR L+E+++R
Sbjct: 540 RAIDILNIMLDQ-GCDPDFITCDIFLKTLRENMNPPQDGR-----EFLDELVVR------ 587
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++ +IG A +E M+ + LP S W+ +V VC
Sbjct: 588 -----LVKRQRTIG----ASKIIEVMMHKFLLPKASTWAMVVQQVC 624
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 226/473 (47%), Gaps = 11/473 (2%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
IFK A + +Y+ + S+I + S + +V D+MK + + F R
Sbjct: 66 IFKSASQ-MGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRA 124
Query: 90 YARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG-WEV 147
Y +A +A+ LF + + +F C +SFN++L +++E A + G +
Sbjct: 125 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI 184
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ S NL++ +C+ D A+ VF+EM Q C PD +Y LM GLC + R++EA
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL M +G V + L+ LC +G + ++++ + KG + + I
Sbjct: 245 LLDEM----QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G+ ++ A SL++ + +P+ +Y + L +GR V+G +L + +G
Sbjct: 301 NGLCLKGK-LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ Y ++ LFK+ +EA+ + ++ + KG P + VY+ L+ GLC G A
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC-QPNIVVYSALIDGLCREGKLDEAK 418
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L +M + GC N TY L+ G + G +A RV +EM + P Y+VLI G
Sbjct: 419 EILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 477
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
LC GK EA+M M+ + PD+ +SS++ + CN + V K ++
Sbjct: 478 LCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL-CNAGSVEVGLKLFNEM 529
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 140/349 (40%), Gaps = 72/349 (20%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T +S + K++KS A+ ++K+ EK + N VY+++I L ++ E KE++ +M
Sbjct: 368 TLISGLFKEEKSE-EAMGLWKKMVEK--GCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
C +++ I+ + + G +A+ ++K +++ NCV ++ L+ + ++ KL
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
A + ++ M +G PD +Y
Sbjct: 485 REA------------------------------------MMMWTHMLGRGLRPDVVAYSS 508
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ GLCN + L M + + S D+V Y LL ALC Q I A+ +L +
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQ--ESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 566
Query: 252 LRKGLKAPKSRRHRIDLCPCN--------DGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
L +G DL CN + + ++E ++R
Sbjct: 567 LDRGCNP--------DLITCNIFLNALREKLNPPQDGREFLDELVVR------------- 605
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
L+ RIV K+++ M K P+ +E + L K V ++
Sbjct: 606 --LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 652
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 223/480 (46%), Gaps = 14/480 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + +++ Q AL F A ++ YRH+ VY +M+ ILS++ +
Sbjct: 160 RSLNPRLVCAVLRSQDDERIALDFFYWADRQW-RYRHDAIVYYTMLDILSKTRLCQGARR 218
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ M E F+ + +Y+RAG L A+ + + + NT + +V
Sbjct: 219 ILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLV 278
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K +KLE A + FL ++ I S N L+ C R D AL + EM F+GC PD+
Sbjct: 279 KGNKLEKA-LRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDK 337
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC DR++ E L+ +M + D V Y TL++AL G DA+
Sbjct: 338 VSYYTVMAFLCKDRKVEEVKRLMENM---VQNSNLIPDQVTYNTLIYALSKHGHADDALV 394
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L + KG K + C + ++I+ AKSL+ + +G P + +Y+A+
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKN-KNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGF 453
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEEMVKGTF 363
G+I E K+L +M G P+ V Y L L +G EA E+I EE +
Sbjct: 454 CRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW----W 509
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y+ ++ GL G + A ++M ++ G + N +L+ LCR+ + A
Sbjct: 510 TPNAITYSAVMHGLRREGKLSEACDLTREMIEK-GFLPNPVDINLLIQSLCRNQNVVGAK 568
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ LEE L + V + +I G C IG A+ LE+M K PD +++L ++
Sbjct: 569 KYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDAL 628
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 205/472 (43%), Gaps = 52/472 (11%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+ I +L + N++ + +++MK E + I+ Y ++++A+ L +
Sbjct: 272 TAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFK 331
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C S+ T++ + K+ K+E L + + N L+ L + +D
Sbjct: 332 GCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADD 391
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL +E + +G + D+ Y ++ C ++ +++A L+ M+ KG D+V Y
Sbjct: 392 ALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY----SKGCNPDVVTYT 447
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEAL 288
++ C GKI +A ++L+++ + G K P + + + L C++G+ +E A+ +IN +
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKHGCK-PNTVTYTVLLNGLCHNGKSLE-AREMINVSE 505
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
P+ +YSA+ L EG++ E + EM KGF P+ V + +L ++ V
Sbjct: 506 EHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVV 565
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---SKQVGCVANGET 405
A + +EE + KG V V +++ G C G+ A+ L+ M +K + T
Sbjct: 566 GAKKYLEECLHKGCAVNVVNFTSVIY-GFCQIGDLDAALSMLEDMYLSNKHPDAI----T 620
Query: 406 YGILVDGLCRDGRFLEAS-----------------------------------RVLEEML 430
Y L D L + R EAS ++LE+M+
Sbjct: 621 YTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI 680
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
R P YN +I LC G + EA L +++ A D L+ S
Sbjct: 681 ARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIES 730
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 18/323 (5%)
Query: 170 ALHVFQEMDFQGCYPD----RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
AL + M G PD + ++L+KG +L +A L R+ G DI
Sbjct: 251 ALRILTLMQKAGVEPDLSICNTAIYVLVKG----NKLEKALRFL----ERMKVAGIEPDI 302
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ CD +I DA++++ ++ KG K + + C D +E K L+
Sbjct: 303 VSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKD-RKVEEVKRLM- 360
Query: 286 EALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E +++ IP +Y+ + L G + L E KGF V Y A + + K
Sbjct: 361 ENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCK 420
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ +D+A ++ + KG P V Y ++ G C G A L++M K GC N
Sbjct: 421 NKNIDKAKSLVIDMYSKGC-NPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH-GCKPNT 478
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY +L++GLC +G+ LEA ++ + P TY+ ++ GL GK EA E
Sbjct: 479 VTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTRE 538
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
MI + LP+ + L+ S+C N
Sbjct: 539 MIEKGFLPNPVDINLLIQSLCRN 561
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 178/408 (43%), Gaps = 33/408 (8%)
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKL------EAAHILFLRSCYGWEVKSRIQSL-- 154
F+ +S F+ + + + + ES+ E ++ LRS + + + ++ L
Sbjct: 101 FEFISSFDGNGSNKQRENIARFEIDESEFRHPIVREVCRLISLRSNWNPKFEENLRHLLR 160
Query: 155 NLLMDVLCQCRRSD----LALHVFQEMDFQGCY-PDRESYHILMKGLCNDRRLNEATHLL 209
+L ++C RS +AL F D Q Y D Y+ ++ L R A +L
Sbjct: 161 SLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRIL 220
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M +++G + ++ + G +++A++IL + + G++ DL
Sbjct: 221 RLM----TRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEP--------DLS 268
Query: 270 PCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
CN G +E A + + G P + SY+ + + RI + +++ EM
Sbjct: 269 ICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEM 328
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG P V Y +A L KD V+E ++E + +P YN L+ L G+
Sbjct: 329 PFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGH 388
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+ A+++L++ +++ G + Y +VD C++ +A ++ +M + P V TY
Sbjct: 389 ADDALVFLRE-AEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYT 447
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+I G C +GK EA L++M P+ ++ L+ +C N L
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 180/421 (42%), Gaps = 38/421 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+K +++ M +S D V + T I ++ G ++A+ +
Sbjct: 340 YYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREA 399
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ ++ K ++ A L + Y + + ++D C+ +
Sbjct: 400 EEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVI-DMYSKGCNPDVVTYTAIIDGFCRVGK 458
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--------------YSM 212
D A + Q+M GC P+ +Y +L+ GLC++ + EA ++ YS
Sbjct: 459 IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSA 518
Query: 213 FWR-----------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ +KG + V L+ +LC + A + LE+ L KG
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ C G D++ A S++ + + P +Y+ + L + R+ E
Sbjct: 579 CAVNVVNFTSVIYGFCQIG-DLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEA 637
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++ +M KG P+ V Y A + + G VD+ ++++E+ + + F VYN +++
Sbjct: 638 SELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKT---VYNQVIE 694
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC GN A L K+ + + + +T IL++ DG L A +V +M R+
Sbjct: 695 KLCYFGNREEAEKLLGKVLRTASKL-DAKTCHILIESYLIDGNALSAYKVACQMFRRNLI 753
Query: 436 P 436
P
Sbjct: 754 P 754
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 14/315 (4%)
Query: 41 YRH----NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
Y+H N Y ++ L + + E +E+I+ + ++ + R G+L
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+EA L + + + + N L++ + + + A +L C + +
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAK-KYLEECLHKGCAVNVVNFTS 588
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++ CQ D AL + ++M +PD +Y L L RL+EA+ L+ M
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLG-- 646
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
KG V YR ++ C G++ D M++LEK++ + + K+ +++ C G +
Sbjct: 647 --KGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFG-N 701
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A+ L+ + L R A + I+ Y +G + KV +M + P L + E
Sbjct: 702 REEAEKLLGKVL-RTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCE 760
Query: 336 AKLAALFKDGMVDEA 350
L DGM EA
Sbjct: 761 KVTKKLVLDGMPAEA 775
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 246/535 (45%), Gaps = 50/535 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P TP L + +++Q + AL++F A K PN+ + VY ++ L ++ M+
Sbjct: 59 PPDFTPKQLIETLRRQTDEVAALRVFNWAS-KQPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKE 124
V+++MK CE +F + +Y + +E V + K + ++ T+ +N LL
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177
Query: 125 MVKESKL---EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+V +KL E+AH +R ++ + + N+L+ LC+ + A+ + +EM G
Sbjct: 178 LVDANKLKLVESAHSSMVRR----RIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYG 233
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD ++ +M+G L+ A + M + G V L+ C QG+I
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMV----EYGCPCTDVTVNVLINGFCKQGRI 289
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A+ +++ + +G + + + + C G + A +++ L+ G P + +Y++
Sbjct: 290 DQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH-AKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L G I E K+LD+M ++ P+ V Y A +++L K+ VDEA E+ KG
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---------------------SKQV--- 397
+P V +N L++GLC + N A+ ++M S+++
Sbjct: 409 -ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467
Query: 398 ----------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
GC N Y L+DG C++ R EA + +EM ++ TYN LI G
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
LC + +A +++MI + PD ++SL+ C T D+ ++ ++S
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF-CKTGDIKKAADIVQTMTS 581
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 210/472 (44%), Gaps = 48/472 (10%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
KQ AL +EA + +R + Y +++ L + EV+D M +
Sbjct: 285 KQGRIDQALSFIQEAVSE--GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILF 138
+ + I + G++ EAV + + +C ++N ++ + KE+++ EA I
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
L + G + + + N L+ LC A+ +F+EM +GC PD +Y++L+ LC+
Sbjct: 403 LLTSKG--ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
R+L EA +LL M G ++VIY TL+ C +I++A +I +++ +G+
Sbjct: 461 SRKLEEALNLLKEM----ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV-- 514
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
SR S+ LI G L R+ + ++
Sbjct: 515 --SR------------------DSVTYNTLIDG--------------LCKSKRVEDAAQL 540
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+D+M +G P Y + L K G + +A ++++ M P + Y L+ GLC
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT-MTSSGCNPDIVTYATLISGLC 599
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
AG VA L+ + + G V Y ++ L + R EA R+ EML +S P
Sbjct: 600 KAGRVQVASRLLRSIQMK-GMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDA 658
Query: 439 ETYNVLIRGLCSIGKQY-EAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
TY ++ RGLC+ G EAV + EMI + +P+ S + L +C + D
Sbjct: 659 ITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMD 710
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 207/474 (43%), Gaps = 35/474 (7%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
RH+ + +I L +++++ ++++M ++ F T ++ Y G L+ A+
Sbjct: 200 RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR 259
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + ++ C + N L+ K+ +++ A + F++ + + N L++ L
Sbjct: 260 IKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA-LSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR------ 215
C+ + A+ V M G PD +Y+ L+ GLC + EA +L M R
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378
Query: 216 -------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ KG D+ + +L+ LC + AM + E+
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ KG + P + + + +E A +L+ E + G ++ Y+ +
Sbjct: 439 MKGKGCR-PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
RI E +++ DEM +G V Y + L K V++A +++++ +++G P Y
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG-LRPDKFTY 556
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N LL C G+ A ++ M+ GC + TY L+ GLC+ GR ASR+L +
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSS-GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ YN +I+ L + +EA+ EM+ +++ PD + + +C
Sbjct: 616 MKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 223/464 (48%), Gaps = 17/464 (3%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRI 61
++W + +TP+ + Q+++ ++ A IF A +Y N +RH+ + MI L +N
Sbjct: 7 LKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEF 66
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+E++++MK + C + +F + R Y R +A+ +F ++ F C +S+ ++
Sbjct: 67 RPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISV 126
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQ 180
+V+E++L+ A + F + V+ + SLN+L+ LC+ + D A +F+EM +
Sbjct: 127 FAILVEENQLKVA-MSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKR 185
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD +Y L+ GLC + EA L F + KG +V Y L+ LC G
Sbjct: 186 GCDPDSYTYGTLINGLCKLGKTFEAKEL----FKEMDTKGCSPSVVTYSCLMHGLCQAGN 241
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ +AM + +K+ +K ++ + C +G +E A L+ + + P++ +YS
Sbjct: 242 VDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLE-AMELLEMMVRKRHKPNMVTYS 300
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG++ E + LD M+ +G P +Y + EA + +EMV
Sbjct: 301 TLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYL-DEMVL 359
Query: 361 GTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
G P V++ N++++GLC GN + M + G + T+ LV
Sbjct: 360 GQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTR-GISIDAGTFDSLVKCF 418
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C+ G +A+R+ +EM++ P ++ ++ G K EA
Sbjct: 419 CKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREA 462
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
N G I ++ EM +G P Y + L K G EA E+ +E KG P+V
Sbjct: 168 NSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGC-SPSV 226
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC AGN A+ KM K+ N TY L+DGLC++G LEA +LE
Sbjct: 227 VTYSCLMHGLCQAGNVDEAMGLFDKMKKK-AIEPNVFTYSSLMDGLCKNGGSLEAMELLE 285
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+ + + P + TY+ LI GLC GK EAV L+ M Q PD ++ ++ C
Sbjct: 286 MMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFC 342
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+V +M G P+ Y + A L ++ + A+ + G V + N+L+K
Sbjct: 106 RVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSL-NVLIKA 164
Query: 377 LC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC ++G A ++M K+ GC + TYG L++GLC+ G+ EA + +EM +
Sbjct: 165 LCKNSGTIDAAFEIFREMPKR-GCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCS 223
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
P V TY+ L+ GLC G EA+ ++M +A P++ +SSL+ +C N L
Sbjct: 224 PSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL 278
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 228/471 (48%), Gaps = 15/471 (3%)
Query: 15 SQIIKKQKSP--LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
S ++K+ K+ L+++ F A ++H Y MI L + ++ ++ QMK
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + +F I Y R G +A+ +F + +F C + +N LL ++ E+K +
Sbjct: 102 MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQ 161
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ L+ + + + + N+L+ LC+ R D A +F EM +GC PD +Y +
Sbjct: 162 MINPLYTNMKKDGLIPN-VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ LC ++++A L + +Y L+ +C +G+I+ A+++L +++
Sbjct: 221 VSSLCKAGKIDDARELAGRF---------KPSVPVYNALIDGMCKEGRIEVAIKLLGEMM 271
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G+ I C G ++E A +L + +RG ++ +++ + + G++
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSG-NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E + M G P++V Y + L +G ++EAL+V ++ M + +P V Y+I
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ-MQRSGCLPNVTTYSI 389
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ G +G+ A +M GC N TY +VD LC++ F +A+ ++E+M +
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P T+N I+GLC G+ A+ LE M LP+I+ ++ L+ ++
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 210/492 (42%), Gaps = 56/492 (11%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ Y N + +G + Y ++ L +++R+ ++ +M C + T
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + +AG++++A L +N L+ M KE ++E A I L
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVA-IKLLGEMMDN 273
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + S + +++ LC +LA +F +M +GC + ++ L+KG +L EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 206 THLLYSMFWRIS-QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
L W++ Q G ++V Y TL+ LC G +++A+Q+ +++ R G P +
Sbjct: 334 LDL-----WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC-LPNVTTY 387
Query: 265 RIDLCPCNDGEDIEGA-----------------------------------KSLINEALI 289
I + D+ GA SL+ + +
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ +++ L GR+ K+L+ M+ G P++ Y L ALF+ +E
Sbjct: 448 EGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A + +E + P + YN +L G AG A+ K + G + TY +
Sbjct: 508 AFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTM 565
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ C+ G+ A++++E + W P + TY LI G C+ EA+ +L++ I+Q
Sbjct: 566 IHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625
Query: 469 KLPDISVWSSLV 480
P+ + W++LV
Sbjct: 626 ICPNFATWNALV 637
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 11/416 (2%)
Query: 33 EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
+A+E ++ + PVY ++I + + RI +++ +M + + ++ I +
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRI 151
+G + A +LF + C +F L+K KL EA + L G E +
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE--PNV 349
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N L+ LC + AL V +M GC P+ +Y IL+ G L A+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET--- 406
Query: 212 MFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
W R+ G ++V Y ++ LC A ++EK+ +G +
Sbjct: 407 --WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G +E A L+ G +P++ +Y+ + L+ + E + E+ + P+
Sbjct: 465 CGNGR-VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
LV Y L + GM+ EAL++ + +V+GT P YN ++ C G +A +
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+++S + TY L+ G C EA L++ + + P T+N L+R
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 228/471 (48%), Gaps = 15/471 (3%)
Query: 15 SQIIKKQKSP--LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
S ++K+ K+ L+++ F A ++H Y MI L + ++ ++ QMK
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + +F I Y R G +A+ +F + +F C + +N LL ++ E+K +
Sbjct: 102 MDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQ 161
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ L+ + + + + N+L+ LC+ R D A +F EM +GC PD +Y +
Sbjct: 162 MINPLYTNMKKDGLIPN-VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ LC ++++A L + +Y L+ +C +G+I+ A+++L +++
Sbjct: 221 VSSLCKAGKIDDARELAGRF---------KPSVPVYNALIDGMCKEGRIEVAIKLLGEMM 271
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G+ I C G ++E A +L + +RG ++ +++ + + G++
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSG-NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E + M G P++V Y + L +G ++EAL+V ++ M + +P V Y+I
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ-MQRSGCLPNVTTYSI 389
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ G +G+ A +M GC N TY +VD LC++ F +A+ ++E+M +
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P T+N I+GLC G+ A+ LE M LP+I+ ++ L+ ++
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 210/492 (42%), Gaps = 56/492 (11%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ Y N + +G + Y ++ L +++R+ ++ +M C + T
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + +AG++++A L +N L+ M KE ++E A I L
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVA-IKLLGEMMDN 273
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + S + +++ LC +LA +F +M +GC + ++ L+KG +L EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 206 THLLYSMFWRIS-QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
L W++ Q G ++V Y TL+ LC G +++A+Q+ +++ R G P +
Sbjct: 334 LDL-----WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC-LPNVTTY 387
Query: 265 RIDLCPCNDGEDIEGA-----------------------------------KSLINEALI 289
I + D+ GA SL+ + +
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ +++ L GR+ K+L+ M+ G P++ Y L ALF+ +E
Sbjct: 448 EGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A + +E + P + YN +L G AG A+ K + G + TY +
Sbjct: 508 AFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTM 565
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ C+ G+ A++++E + W P + TY LI G C+ EA+ +L++ I+Q
Sbjct: 566 IHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625
Query: 469 KLPDISVWSSLV 480
P+ + W++LV
Sbjct: 626 ICPNFATWNALV 637
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 11/416 (2%)
Query: 33 EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
+A+E ++ + PVY ++I + + RI +++ +M + + ++ I +
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRI 151
+G + A +LF + C +F L+K KL EA + L G E +
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE--PNV 349
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N L+ LC + AL V +M GC P+ +Y IL+ G L A+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET--- 406
Query: 212 MFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
W R+ G ++V Y ++ LC A ++EK+ +G +
Sbjct: 407 --WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G +E A L+ G +P++ +Y+ + L+ + E + E+ + P+
Sbjct: 465 CGNGR-VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
LV Y L + GM+ EAL++ + +V+GT P YN ++ C G +A +
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+++S + TY L+ G C EA L++ + + P T+N L+R
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 212/454 (46%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + + + Y SMI +L ++ R+ E +E+ QM+ + + T
Sbjct: 268 AWKFFHELKAQ--GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AG+ +A L + L + C+ SFN++L + K+ K++ A LF +
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF--EVMKKD 383
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+++D+LC R + A + EM+ +P+ + +I++ LC R+L EA
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA- 442
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F SQ+G D V Y +L+ L +G++ +A ++ EK+L G
Sbjct: 443 ---YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG----------- 488
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
A ++ +LIR + + GR +G K+ E+ +G
Sbjct: 489 -----------HNANPVVYTSLIR--------------NFFIHGRKEDGHKIFKELIRRG 523
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +FK G V++ + E+ G F+P VR Y+IL+ GL AG +
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARET 582
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M KQ G + Y +VDG C+ G+ +A +LEEM + P V TY ++
Sbjct: 583 SNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 641
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S+ ++ ++SSL+
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 189/434 (43%), Gaps = 51/434 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ ++ E ++ + C + + I + GQ++EA LF+ +
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +L++ + E H +F R C K + LN MD + +
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC-----KPDLTLLNTYMDCVFKAGE 543
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ +F+++ G PD SY IL+ GL + E +++ ++M Q+G D
Sbjct: 544 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM----KQQGFALDAR 599
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ C GK+ A +ILE++ K ++
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ----------------------------- 630
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++A+Y A+ L R+ E + +E ++KG ++V+Y + + K G
Sbjct: 631 -------PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA ++EE M KG P V +N LL L A A++ + M K++ C N TY
Sbjct: 684 IDEAYLILEEMMKKG-LTPNVYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTY 741
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++GLCR ++ +A ++M + P V TY +I GL +G +A E +
Sbjct: 742 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 467 QAKLPDISVWSSLV 480
+PD + +++L+
Sbjct: 802 NGGIPDAASFNALI 815
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 184/440 (41%), Gaps = 44/440 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R Y +IG L+E+ R E++ QM+ E +F T +R AR GQ+ +A+
Sbjct: 175 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 234
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + VK S LE +L+ N+ +D
Sbjct: 235 ALV--------------------DEVKGSCLEPDIVLY----------------NVCIDC 258
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ D+A F E+ QG PD SY ++ LC RL EA L F ++ +
Sbjct: 259 FGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL----FAQMEAER 314
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
S Y T++ G+ +DA ++LE++ +G + I C ++ A
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC-LGKKRKVDEA 373
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
SL E + + P+ ++Y+ + L GR+ E ++LDEM +P+L+ +
Sbjct: 374 LSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 432
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K ++EA ++ E +G P Y L+ GL G A +KM G
Sbjct: 433 LCKARKLEEAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHN 490
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
AN Y L+ GR + ++ +E++ R P + N + + G+ + M
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550
Query: 461 LEEMISQAKLPDISVWSSLV 480
E++ S LPD+ +S L+
Sbjct: 551 FEDIRSYGFLPDVRSYSILI 570
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
IF K++ + + Y +++ +S ++ + E++++MK + + + +
Sbjct: 585 IFHAMKQQ--GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
A+ +L+EA LF+ +++L+ K +++ A+ L L +
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY-LILEEMMKKGLTP 701
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + N L+D L + + AL FQ M C P+ +Y IL+ GLC ++ N+A
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF--- 758
Query: 210 YSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+FW+ QK G ++V Y T++ L G I DA + E+ KA
Sbjct: 759 --VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER-----FKA---------- 801
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
GGIP AS++A+ + N R +E +V +E R +G
Sbjct: 802 ---------------------NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+KVL+EM G+ AAL + +D+A+ + M + F P Y +L+
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAV-MRRLKFRPAFSAYTVLIG 187
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L +A A+ L++M ++VG + LV L R+G+ +A +++E+
Sbjct: 188 ALAEARRPERALELLRQM-QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE 246
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + YNV I G A + E+ +Q PD ++S++ +C
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 187/375 (49%), Gaps = 9/375 (2%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C +F +LK K+ KL + LF + I+ N+L+D + R D A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIE-YNILIDGYAKKGRVDEA 62
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+++EM G P +Y+ L+ C + ++ EA L F +++KG D+V Y T
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMEL----FKTMAEKGFEPDVVTYST 118
Query: 231 LLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ LC GK+ +A+++L K++ +G A + + C D E+IE A L+ E
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKD-ENIERAYKLLEEMAS 177
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G +P +Y+ + L G++ E + D M ++G+ P +V Y L AL+K+G DE
Sbjct: 178 KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDE 237
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+++ ++ + KG ++P YN +L GL N A KKM GC NG TY I+
Sbjct: 238 AMKLFKDVIAKG-YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS-GCAPNGATYSIV 295
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G CR + +A +VLEEM P V TYN+L+ GLC +A M+
Sbjct: 296 LSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 355
Query: 470 LPDISVWSSLVASVC 484
PDI +S ++ +C
Sbjct: 356 APDIVSYSVVLNGLC 370
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 208/429 (48%), Gaps = 9/429 (2%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C F ++++ + G+L + LF+ + +N L+ K+ +++ A+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L+ ++ I + N L++ C+ + A+ +F+ M +G PD +Y ++ G
Sbjct: 64 RLY-EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC ++ EA +L F ++ ++G + V Y L+ LC I+ A ++LE++ KG
Sbjct: 123 LCKTGKVTEALEML---FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ I C G+ + AK + RG P + +Y+ + LY EG+ E
Sbjct: 180 YVPDNITYNTILSGLCRMGK-VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
K+ ++ KG+ P V Y + L L + +DEA E+ ++ MV P Y+I+L
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK-MVASGCAPNGATYSIVLS 297
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C A A L++MSK +G V + TY IL+DGLC+ +A + M+
Sbjct: 298 GHCRAKKVDDAHKVLEEMSK-IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 356
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRK 495
P + +Y+V++ GLC K ++A + + MI + +PD+ ++ L+ + C L+ +
Sbjct: 357 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL-CKAGKLDEAKD 415
Query: 496 TLEQLSSCS 504
L+Q+ +CS
Sbjct: 416 LLDQM-TCS 423
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 9/395 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I YA+ G+++EA L++ + ++N+LL KE+K++ A LF ++
Sbjct: 50 IDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF-KTMAEKG 108
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + + ++ LC+ + AL +F +M +GC + +Y+ L+ GLC D + A
Sbjct: 109 FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERA 168
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y + ++ KG D + Y T+L LC GK+ +A Q + + +G +
Sbjct: 169 ----YKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ +G+ E K L + + +G +P +Y+++ + L + + E +++ +M
Sbjct: 225 LLDALYKEGKTDEAMK-LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ Y L+ + VD+A +V+EE M K VP V YNILL GLC
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEE-MSKIGAVPDVVTYNILLDGLCKTNLVDK 342
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A M GC + +Y ++++GLC+ + +A + + M+ R P V T+N+L+
Sbjct: 343 AHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GLC GK EA L++M PD +++L+
Sbjct: 402 DGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 202/434 (46%), Gaps = 17/434 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G Y +I ++ R+ E + ++M E + + + + + ++ EA+ LF
Sbjct: 42 DGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF 101
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSLNLLM 158
K +++ +++T++ + K K+ A H + R C V + N L+
Sbjct: 102 KTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV-----AYNALI 156
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ LC+ + A + +EM +G PD +Y+ ++ GLC +++EA SM R
Sbjct: 157 NGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR--- 213
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D+V Y LL AL +GK +AM++ + ++ KG P + + L +++
Sbjct: 214 -GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY-MPDTVTYNSILLGLARKSNMD 271
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ + + + G P+ A+YS + ++ + KVL+EM G P +V Y L
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K +VD+A E+ MV P + Y+++L GLC A + +M ++
Sbjct: 332 DGLCKTNLVDKAHELFST-MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER-K 389
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
V + T+ IL+DGLC+ G+ EA +L++M P YN L+ GL G+ +A
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449
Query: 459 MWLEEMISQAKLPD 472
+ M + L D
Sbjct: 450 RLTQAMKEKGFLSD 463
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 199/423 (47%), Gaps = 45/423 (10%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R+LTP + ++I Q L A++IF E + P ++H+ Y ++I L + + M+
Sbjct: 96 RMLTPARVHKLIASQTDALLAMEIF-EVASRQPGFKHSYSTYHTLICKLGRARQFKTMEG 154
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+I QM+ D C +F I Y G NEA+ F + +F + FN LL ++
Sbjct: 155 LIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLI 214
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ LE A LF + + + + ++ N+L+ C + A +F +M QGC PD
Sbjct: 215 EHKCLETALSLF-KKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDV 273
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
E+Y ILM+GLC ++ A +L M KG D + Y TLL +LC + +++A +
Sbjct: 274 ETYSILMQGLCRKSQVKTALGVLDEML----NKGYVPDALTYNTLLNSLCRKMNLREAYR 329
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+L K+ G CN P + +Y+ +
Sbjct: 330 LLSKMKVMG---------------CN---------------------PDVINYNTVITGF 353
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
EGR ++ ++L +M G P+ + Y + L +G DEA + +EE M+ F+P
Sbjct: 354 CREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEE-MISNGFIPH 412
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ +Y++L+ GLC+ G A L M+KQ + T+ +L+ +C D + EA ++
Sbjct: 413 ISIYHLLITGLCNEGKVGEACEVLVMMTKQT-LAPHESTWSVLLMRICEDSQ-TEARELV 470
Query: 427 EEM 429
+++
Sbjct: 471 DKL 473
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 3/257 (1%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ LL L + ++ A+ + +K+ G+ +P +R + I + + + A L N+
Sbjct: 206 FNVLLIVLIEHKCLETALSLFKKLHEFGI-SPNTRTYNILIRAHCHSDKLSHAYFLFNKM 264
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+G IP + +YS + L + ++ VLDEM KG+ P + Y L +L + +
Sbjct: 265 HKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNL 324
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA ++ + V G P V YN ++ G C G + A L+ M + GC+ N +Y
Sbjct: 325 REAYRLLSKMKVMGC-NPDVINYNTVITGFCREGRALDACQILRDMPEN-GCLPNALSYR 382
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LV+GLC +G+F EA +EEM+ + P + Y++LI GLC+ GK EA L M Q
Sbjct: 383 TLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQ 442
Query: 468 AKLPDISVWSSLVASVC 484
P S WS L+ +C
Sbjct: 443 TLAPHESTWSVLLMRIC 459
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 244 AMQILEKILRK-GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
AM+I E R+ G K S H + +C + + LI + + + G P
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTL-ICKLGRARQFKTMEGLIQQ-MRKDGCPYTPGLFVD 173
Query: 303 AIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
I++Y E G E K +M G+ P + L L + ++ AL + ++ G
Sbjct: 174 IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P R YNIL++ C + + A KM KQ GC+ + ETY IL+ GLCR +
Sbjct: 234 -ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQ-GCIPDVETYSILMQGLCRKSQVKT 291
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A VL+EML + Y P TYN L+ LC EA L +M PD+ +++++
Sbjct: 292 ALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVIT 351
Query: 482 SVCCNTADLNVCR 494
C L+ C+
Sbjct: 352 GFCREGRALDACQ 364
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 212/454 (46%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + + + Y SMI +L ++ R+ E +E+ QM+ + + T
Sbjct: 134 ACKFFHELKAQ--GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AG+ +A L + L + C+ SFN++L + K+ K++ A LF +
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF--EVMKKD 249
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+++D+LC R + A + EM+ +P+ + +I++ LC R+L EA
Sbjct: 250 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA- 308
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F SQ+G D V Y +L+ L +G++ +A ++ EK+L G
Sbjct: 309 ---YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG----------- 354
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
A ++ +LIR + + GR +G KV E+ +G
Sbjct: 355 -----------HNANPVVYTSLIR--------------NFFIHGRKEDGHKVFKELIRRG 389
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +FK G V++ + E+ G F+P VR Y+IL+ GL AG +
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARET 448
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M KQ G + Y +VDG C+ G+ +A +LEEM + P V TY ++
Sbjct: 449 SNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 507
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S+ ++ ++SSL+
Sbjct: 508 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 199/458 (43%), Gaps = 51/458 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ ++ E ++ + C + + I + GQ++EA LF+ +
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +L++ + E H +F R C K + LN MD + +
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC-----KPDLTLLNTYMDCVFKAGE 409
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ +F+++ G PD SY IL+ GL + E +++ ++M Q+G D
Sbjct: 410 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM----KQQGFALDAR 465
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ C GK+ A +ILE++ K ++
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ----------------------------- 496
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++A+Y A+ L R+ E + +E ++KG ++V+Y + + K G
Sbjct: 497 -------PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 549
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA ++EE M KG P V +N LL L A A++ + M K++ C N TY
Sbjct: 550 IDEAYLILEEMMKKG-LTPNVYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTY 607
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++GLCR ++ +A ++M + P V TY +I GL +G +A E +
Sbjct: 608 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 667
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+PD + +++L+ + + + T+ QLSS S
Sbjct: 668 NGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSSSS 705
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 184/440 (41%), Gaps = 44/440 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R Y +IG L+E+ R E++ QM+ E +F T +R AR GQ+ +A+
Sbjct: 41 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 100
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + VK S LE +L+ N+ +D
Sbjct: 101 ALV--------------------DEVKGSCLEPDIVLY----------------NVCIDC 124
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ D+A F E+ QG PD SY ++ LC RL EA L F ++ +
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL----FAQMEAER 180
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
S Y T++ G+ +DA ++LE++ +G + I C ++ A
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC-LGKKRKVDEA 239
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
SL E + + P+ ++Y+ + L GR+ E ++LDEM +P+L+ +
Sbjct: 240 LSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 298
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K ++EA ++ E +G P Y L+ GL G A +KM G
Sbjct: 299 LCKARKLEEAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKML-DAGHN 356
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
AN Y L+ GR + +V +E++ R P + N + + G+ + M
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416
Query: 461 LEEMISQAKLPDISVWSSLV 480
E++ S LPD+ +S L+
Sbjct: 417 FEDIRSYGFLPDVRSYSILI 436
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AAL + +D+A+ + M + F P Y +L+ L +A A+ L++M ++VG
Sbjct: 18 AALVRARRLDDAVLAVAV-MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVG 75
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ LV L R+G+ +A +++E+ P + YNV I G A
Sbjct: 76 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+ E+ +Q PD ++S++ +C
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLC 161
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 233/515 (45%), Gaps = 37/515 (7%)
Query: 2 SVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
+ + P+ TP L +++Q + L + A K PN+ + +Y ++ L +
Sbjct: 63 TTQLPQNFTPKQLRDALRRQSDEDSILDLLDWAS-KQPNFVPSSVIYEEVLRKLGKDGSF 121
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNT 120
M+ V+ +MK CE + F I +YA+ +EAV++ + +F ++N
Sbjct: 122 GSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNF 181
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL +V +KL+ I+ R +K + + N+L+ LC+ + A+ + +EM
Sbjct: 182 LLNVLVDGNKLKLVEIVNSR-MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY 240
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHL-------------------------------L 209
G PD +++ LM+G + +N A + +
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
S +S +G D + +L+ LC G ++ A++IL+ +L++G + +
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C GE +E A ++N+ ++R P+ +Y+ + L E ++ E ++ + +KG P
Sbjct: 361 LCKLGE-VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 419
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + + + L A+E+ EE KG P YN+L+ LC G A+
Sbjct: 420 DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCH-PDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
LK+M GC N TY L+DG C++ R EA + +EM ++ V TYN LI GLC
Sbjct: 479 LKEMESS-GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA +++M+ + PD ++SL+ C
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 200/445 (44%), Gaps = 44/445 (9%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + + S++ L + E++D M + + + + I + G++ EAV
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAV 371
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + T ++NTL+ + KE+++E A L R + + + N L+
Sbjct: 372 EILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQG 430
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC LA+ +F+EM +GC+PD +Y++L+ LC+ RL EA LL M G
Sbjct: 431 LCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM----ESSG 486
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y TL+ C +I++A +I +++ +G+ SR
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI----SR------------------ 524
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++ +Y+ + L R+ E +++D+M +G P Y + L
Sbjct: 525 --------------NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ G + +A ++++ M P Y L+ GL AG +A L+ + + G V
Sbjct: 571 FCRAGDIKKAADIVQT-MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK-GMV 628
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVM 459
+TY ++ L R+ R EA R+ EM+ + P TY V+ RGLCS G EAV
Sbjct: 629 LAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVD 688
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+L EM + LPD S + L +C
Sbjct: 689 FLVEMTDKGFLPDFSSFLMLAEGLC 713
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 203/435 (46%), Gaps = 11/435 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M G + E N ++ + +QM C + + Y + G++ E +S +S
Sbjct: 253 MQGFIEEGNMNGALR-IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG 311
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+FN+L+ + + ++ A IL + G++ I + N L+ LC+ +
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD--PDIFTYNSLIFGLCKLGEVEE 369
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ + +M + P+ +Y+ L+ LC + ++ EAT L + + KG D+ +
Sbjct: 370 AVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILPDVCTFN 425
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ LC + AM++ E++ KG + + + C+ G +E A SL+ E
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR-LEEALSLLKEMES 484
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G ++ +Y+ + RI E +++ DEM +G ++V Y + L K+ V+E
Sbjct: 485 SGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEE 544
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++++ +++G P YN LL C AG+ A ++ M+ GC + TYG L
Sbjct: 545 AAQLMDQMLMEG-LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN-GCEPDSVTYGTL 602
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GL + GR ASR+L + ++ +TYN +I+ L + EAV EM+ +
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662
Query: 470 LPDISVWSSLVASVC 484
PD + + +C
Sbjct: 663 PPDAVTYKVVFRGLC 677
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ R+ E +++DQM + + + + + + RAG + +A + + +
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + ++ TL+ + K ++E A L LR+ + Q+ N ++ L + +R
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASRL-LRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCN-DRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ +F+EM +G PD +Y ++ +GLC+ + EA L M + KG D
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEM----TDKGFLPDF 702
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ L LC ++++ +++++
Sbjct: 703 SSFLMLAEGLCALSMEDTLIKLVNRVMKQA 732
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 229/479 (47%), Gaps = 10/479 (2%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V P++++PT + +++K +K+P AL IF A + +P Y H V+ ++ L + +
Sbjct: 2 VELPKVISPTLVLKLLKAEKNPNAALAIFDSACQ-HPGYAHPPFVFHHILRRLMDPKLVV 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ ++D M+ C C + V +AI+ YA+ ++A++LF+N+ F C +SFN++
Sbjct: 61 HVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L ++ ++ A LF + +Q+ N+L+ + C+ R+ + + M G
Sbjct: 121 LNAFIESNQWREAE-LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENG 179
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD SY L+ L L +A L F +S +G D++ Y L+ +G
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVEL----FDEMSVRGVNPDVMCYNILIDGFLRKGDF 235
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A +I +++L + P + I + ++ + + N P L ++S+
Sbjct: 236 VKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSS 295
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M L G +KV EM G P + Y A L+ LF+ G +++ E + M K
Sbjct: 296 MIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE-LWNVMSKN 354
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
V YN+L++GL D A+ Y + + ++ G A+ TYG+L++GLC++G +
Sbjct: 355 NCCNIVS-YNMLIQGLLDNKKVEQAICYWQLLHER-GLKADSTTYGLLINGLCKNGYLNK 412
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
A R+LEE Y+ ++ GLC G +AV + +M + + V++SL+
Sbjct: 413 ALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLI 471
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 211/442 (47%), Gaps = 19/442 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI L + ++ E E+ ++MK + F++ I ++AG N A +F+ +
Sbjct: 257 TYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM 316
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
+ +++N +L + + KL L W V S+ I S N+L+ L
Sbjct: 317 IESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-------WNVMSKNNCCNIVSYNMLIQGL 369
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
++ + A+ +Q + +G D +Y +L+ GLC + LN+A +L +G+
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE----EAENEGA 425
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D Y +++ LC +G ++ A++++ + ++K + S + +E A
Sbjct: 426 DLDTFAYSSMVHGLCKKGMLEQAVELIHQ-MKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
S++ E + P++ SY+ + L R + L EM +G P ++ Y + L
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ VD AL + + + P ++++NI++ GLC A VA+ +M +QV CV
Sbjct: 545 CRGEKVDMALN-LWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM-RQVNCVP 602
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ T+ +++GL + G +EA ++ + +L P + +YN+ +GLCS + +A+ +L
Sbjct: 603 DLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFL 662
Query: 462 EEMISQAKLPDISVWSSLVASV 483
+ + + LP+ W+ LV +V
Sbjct: 663 YDALDRGILPNAPTWNVLVRAV 684
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 191/438 (43%), Gaps = 45/438 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL- 106
Y ++I L++S + + E+ D+M + I + R G +A ++K L
Sbjct: 187 YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ + +++N ++ + K KL+ + ++ R E + + + ++ L +
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKN-EKSPDLFTFSSMIHGLSKAGN 305
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A VFQEM G PD +Y+ ++ GL +LN+ L W + K + +IV
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-----WNVMSKNNCCNIV 360
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L D K++ A+ + + +GLKA +
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADST------------------------- 395
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+Y + L G + + ++L+E +G Y + + L K GM
Sbjct: 396 -----------TYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+++A+E+I + M K V+N L+ G A A+ L++M K C +Y
Sbjct: 445 LEQAVELIHQ-MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM-KSKDCAPTVVSY 502
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++GLC+ RF +A L+EML P + TY++LI GLC K A+ + I+
Sbjct: 503 NTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN 562
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD+ + + ++ +C
Sbjct: 563 KRLKPDLQMHNIIIHGLC 580
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 15/341 (4%)
Query: 163 QCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+C D AL++FQ M D GC P S++ ++ + EA L ++ F G
Sbjct: 90 KCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA-ELFFTYF---QTAGM 145
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++ Y L+ C + + + +L + GL P + + ++ A
Sbjct: 146 SPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLN-PDILSYGTLINALAKSGNLLDAV 204
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSLVMYEAKLAA 340
L +E +RG P + Y+ + +G V+ +++ + T+ +PS+ Y +
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G +DE++E + M K P + ++ ++ GL AGN A ++M + G
Sbjct: 265 LCKLGKLDESME-MWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES-GLS 322
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC--VETYNVLIRGLCSIGKQYEAV 458
+ TY ++ GL R G+ ++ E + S C + +YN+LI+GL K +A+
Sbjct: 323 PDVRTYNAMLSGLFRTGKL---NKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAI 379
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
+ + + + D + + L+ +C N LN + LE+
Sbjct: 380 CYWQLLHERGLKADSTTYGLLINGLCKN-GYLNKALRILEE 419
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I A +++ A+ +F + Q NCV + NT+++ + K A ++ R
Sbjct: 576 IHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA-G 634
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ I S N+ LC C R A+ + +G P+ ++++L++ + +D+ L E
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 212/454 (46%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + + + Y SMI +L ++ R+ E +E+ QM+ + + T
Sbjct: 2 AWKFFHELKAQ--GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 59
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AG+ +A L + L + C+ SFN++L + K+ K++ A LF +
Sbjct: 60 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF--EVMKKD 117
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+++D+LC R + A + EM+ +P+ + +I++ LC R+L EA
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA- 176
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F SQ+G D V Y +L+ L +G++ +A ++ EK+L G
Sbjct: 177 ---YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG----------- 222
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
A ++ +LIR + + GR +G K+ E+ +G
Sbjct: 223 -----------HNANPVVYTSLIR--------------NFFIHGRKEDGHKIFKELIRRG 257
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +FK G V++ + E+ G F+P VR Y+IL+ GL AG +
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARET 316
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M KQ G + Y +VDG C+ G+ +A +LEEM + P V TY ++
Sbjct: 317 SNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S+ ++ ++SSL+
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 409
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 189/434 (43%), Gaps = 51/434 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ ++ E ++ + C + + I + GQ++EA LF+ +
Sbjct: 163 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 222
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +L++ + E H +F R C K + LN MD + +
Sbjct: 223 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC-----KPDLTLLNTYMDCVFKAGE 277
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ +F+++ G PD SY IL+ GL + E +++ ++M Q+G D
Sbjct: 278 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM----KQQGFALDAR 333
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ C GK+ A +ILE++ K ++
Sbjct: 334 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ----------------------------- 364
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++A+Y A+ L R+ E + +E ++KG ++V+Y + + K G
Sbjct: 365 -------PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 417
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA ++EE M KG P V +N LL L A A++ + M K++ C N TY
Sbjct: 418 IDEAYLILEEMMKKG-LTPNVYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTY 475
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++GLCR ++ +A ++M + P V TY +I GL +G +A E +
Sbjct: 476 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535
Query: 467 QAKLPDISVWSSLV 480
+PD + +++L+
Sbjct: 536 NGGIPDAASFNALI 549
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 8/312 (2%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+A F E+ QG PD SY ++ LC RL EA L F ++ + S Y
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL----FAQMEAERSVPCAYAY 56
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
T++ G+ +DA ++LE++ +G + I C ++ A SL E +
Sbjct: 57 NTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC-LGKKRKVDEALSLF-EVM 114
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P+ ++Y+ + L GR+ E ++LDEM +P+L+ + L K ++
Sbjct: 115 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 174
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA ++ E +G P Y L+ GL G A +KM G AN Y
Sbjct: 175 EAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKML-DAGHNANPVVYTS 232
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GR + ++ +E++ R P + N + + G+ + M E++ S
Sbjct: 233 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 292
Query: 469 KLPDISVWSSLV 480
LPD+ +S L+
Sbjct: 293 FLPDVRSYSILI 304
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 127/311 (40%), Gaps = 45/311 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + + + L + K IF K++ + + Y +++ +S ++ +
Sbjct: 295 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQ--GFALDARAYNAVVDGFCKSGKVHKAY 352
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++++MK + + + + A+ +L+EA LF+ +++L+
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +++ A+ L L + + + N L+D L + + AL FQ M C P+
Sbjct: 413 GKVGRIDEAY-LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 471
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDA 244
+Y IL+ GLC ++ N+A +FW+ QK G ++V Y T++ L G I DA
Sbjct: 472 TYTYSILINGLCRVQKYNKAF-----VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 526
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ E+ KA GGIP AS++A+
Sbjct: 527 YSLFER-----FKA-------------------------------NGGIPDAASFNALIE 550
Query: 305 DLYNEGRIVEG 315
+ N R +E
Sbjct: 551 GMSNANRAMEA 561
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 240/503 (47%), Gaps = 47/503 (9%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
+ SP++ KIF + K +++ + S+I + S+ +++V+++M+ ++ +
Sbjct: 50 ESSPISD-KIF-SSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSE 107
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
F + Y +A N+A+ LF +S +F C +SFN++L +++ + A + F
Sbjct: 108 KSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRA-LEFY 166
Query: 140 RSCYG---WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
G + + S NL++ +C+ D A+ +F+EM + C PD +Y LM GL
Sbjct: 167 NHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGL 226
Query: 197 CNDRRLNEATHLLYSM------------------------FWRISQ-------KGSGEDI 225
C R++EA LL M F R+++ KG +
Sbjct: 227 CKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNE 286
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ LC +GK+ A+ +L++++ + I G ++GA+ L+
Sbjct: 287 VTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV- 345
Query: 286 EALI--RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
L+ RG I + YS + L+ EG+ E ++ E KG + V+Y A + L +
Sbjct: 346 --LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCR 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
D DEA++++ E KG P ++ L+KG + GNS A+ K M+K + C N
Sbjct: 404 DRKPDEAMKILSEMTDKGC-APNAFTFSSLMKGFFEVGNSHKAIEVWKDMTK-INCAENE 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y +L+ GLC+DG+ +EA V +ML P V Y+ +I+GLC G EA+ E
Sbjct: 462 VCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNE 521
Query: 464 M--ISQAKLPDISVWSSLVASVC 484
M + PD+ ++ L ++C
Sbjct: 522 MLCLEPDSQPDVITYNILFNALC 544
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 170/388 (43%), Gaps = 16/388 (4%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ +M C + T + + +++EAVSL + C +FN L+ +
Sbjct: 202 ELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGL 261
Query: 126 VKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K+ L FL+ C EV + N L+ LC + D AL + M
Sbjct: 262 CKKGDFTRVTKLVDNMFLKGCVPNEV-----TYNTLIHGLCLKGKLDKALSLLDRMVSSK 316
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ +Y ++ GL R + +L M ++G + +Y L+ L +GK
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLM----EERGYIVNEYVYSVLVSGLFKEGKS 372
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
++AM++ ++ + KG K + C D + E K +++E +G P+ ++S+
Sbjct: 373 EEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK-ILSEMTDKGCAPNAFTFSS 431
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + G + +V +M + V Y + L KDG V EA+ V + + G
Sbjct: 432 LMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATG 491
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P V Y+ +++GLCDAG+ A+ +Y + + + + TY IL + LC+
Sbjct: 492 C-RPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSIS 550
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGL 448
A +L ML R P + T N+ +R L
Sbjct: 551 RAVDLLNSMLDRGCDPDLVTCNIFLRML 578
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 19/490 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTAL--KIFKE----AKEKYPNYRHNGPVYASMIGILSESN 59
P+ LT T+LS +L +IFK + K+ +Y+ + S+I S S
Sbjct: 20 PQTLTLTFLSYSSSNLPHTHHSLPPQIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSL 79
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSF 118
T +++++ QMK ++ + F + Y +A +A+ LF + ++F+C +SF
Sbjct: 80 DFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSF 139
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVF 174
NT+L +++E + A + F S IQ S NL++ LC+ D A+ VF
Sbjct: 140 NTVLNVVIQEGCFDLA-LEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVF 198
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M + C D +Y LM GLCN+ R++EA LL M +G+ + V + L+ A
Sbjct: 199 RGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM----QVEGTFPNPVAFNVLISA 254
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G + A ++++ + KG + + + C G+ ++ A SL+N + +P
Sbjct: 255 LCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGK-LDKAMSLLNRMVANKCVP 313
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ ++ + GR ++G +VL + KG+ + Y + ++ LFK+G + +++
Sbjct: 314 NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLW 373
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E + KG P VY+ L+ GLC G A YL +M K G N TY L+ G
Sbjct: 374 KEMVEKGC-KPNTIVYSALIDGLCREGKPDEAKEYLIEM-KNKGHTPNSFTYSSLMWGYF 431
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
G +A V +EM Y++LI GLC GK EA++ ++M+S+ D+
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 491
Query: 475 VWSSLVASVC 484
+SS++ C
Sbjct: 492 AYSSMIHGFC 501
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 40/229 (17%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
++++KE EK + N VY+++I L + E KE + +MK +++
Sbjct: 369 GMQLWKEMVEK--GCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 426
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ Y AG +++A+ ++K ++ +C + ++ L+ + K KL+ A I
Sbjct: 427 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALI---------- 476
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V+++M +G D +Y ++ G CN + + +
Sbjct: 477 --------------------------VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 510
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L M D+V Y LL A C + + A+ IL +L +G
Sbjct: 511 KLFNQMLCH--NPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQG 557
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 226/466 (48%), Gaps = 17/466 (3%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
+ P + KIFK K +Y+ + S+I + +++V+D+M+ + +
Sbjct: 37 EHDPPISDKIFKSG-PKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVE 95
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVKESKLEAA----- 134
F + Y +A +AV LF ++ +F C +SFN++L +++E A
Sbjct: 96 KCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYN 155
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
H++ + G + + + NL++ +C+ D A+ +F++M C PD +Y LM
Sbjct: 156 HVIGAK---GVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMD 212
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC R++EA LL M G V + L+ LC +G + ++++ + K
Sbjct: 213 GLCKADRIDEAVSLLDEM----QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLK 268
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C G+ +E A SL++ + +P++ +Y + L +GR ++
Sbjct: 269 GCAPNEVTYNTLIHGLCLKGK-LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD 327
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G +VL M +G+ + +Y A ++ LFK+G EA+++ +E VK + T+ VY+ ++
Sbjct: 328 GARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTI-VYSAVI 386
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G A+ L +M+ C N TY L+ G G +A + ++M ++
Sbjct: 387 DGLCRDGKPDEALEVLSEMTNN-RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNF 445
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
Y+VLI GLC GK EA+M +M+ + PD+ + S++
Sbjct: 446 TQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 190/487 (39%), Gaps = 100/487 (20%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
MS + L P+ + + Q PL + A ++ H+ P+ S++
Sbjct: 1 MSSNFSALAIPSTKTIETEPQSHPL-----HRNASDREHGIEHDPPI----------SDK 45
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC---VNWTQS 117
I + K S + DS F + I YA G SL K L + C V +
Sbjct: 46 IFKSGP-----KMGSYKLGDSTFYSLIDNYANLGDFK---SLEKVLDRMRCEKRVVVEKC 97
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
F + K K E A LF R Y +E K ++S N +++V + QE
Sbjct: 98 FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNV------------IIQEG 145
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
F R L H++ + IS +++ + ++ +C
Sbjct: 146 LFY-------------------RALEFYNHVIGAKGVNIS-----PNVLTFNLVIKTMCK 181
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
G + DA+Q+ + P S+ C P +
Sbjct: 182 VGLVDDAVQMFRDM-------PVSK--------CQ---------------------PDVY 205
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + L RI E +LDEM+ G +PS V + + L K G + ++++
Sbjct: 206 TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNM 265
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+KG P YN L+ GLC G A+ L +M CV N TYG +++GL + G
Sbjct: 266 FLKGC-APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSS-KCVPNVVTYGTIINGLVKQG 323
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R L+ +RVL M R Y Y+ LI GL GK EA+ +EM + + V+S
Sbjct: 324 RALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYS 383
Query: 478 SLVASVC 484
+++ +C
Sbjct: 384 AVIDGLC 390
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 139/329 (42%), Gaps = 29/329 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + KQ L ++ +E+ Y N VY+++I L + + E
Sbjct: 307 PNVVTYGTIINGLVKQGRALDGARVLALMEER--GYHVNEYVYSALISGLFKEGKSQEAM 364
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M CE V++ I R G+ +EA+ + ++ C ++++L+K
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ A I + ++L+ LC+ + A+ V+ +M +GC PD
Sbjct: 425 FEAGNGHKA-IEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPD 483
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++ GL N + +A L M + + S D+V Y LL ALC Q I A+
Sbjct: 484 VVAYGSMINGLSNAGLVEDALQLYNEMLCQ--EPDSQPDVVTYNILLNALCKQSSISRAI 541
Query: 246 QILEKILRKGLKAP--------KSRRHRIDLCPCNDGED--------------IEGAKSL 283
+L +L +G ++ R ++D P DG + + GA +
Sbjct: 542 DLLNSMLDRGCDPDLVTCIIFLRTLREKLD--PPQDGREFLDGLVVRLLKRQRVLGASKI 599
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ L + P ++++ + DL N ++
Sbjct: 600 VEVMLQKLLPPKPSTWTRVVEDLCNPKKV 628
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 238/515 (46%), Gaps = 46/515 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LL P +++ +I+ QK P+ AL++F + K ++H Y S+I L + M+
Sbjct: 3 PPLL-PKHVTTVIRCQKDPMKALEMFNSMR-KEDGFKHTLSTYRSIIEKLGLYGKFEAME 60
Query: 66 EVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
EV+ M+ + + V+ A++ Y R G++ EAV++F+ + ++C S+N ++
Sbjct: 61 EVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSI 120
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V + AH +++R + + S + M C+ R AL + M QGC
Sbjct: 121 LVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEM 179
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + +E Y +F ++ G + + LL LC +G +++
Sbjct: 180 NVVAYCTVVGGFYEENFKDEG----YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKEC 235
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++L+K++++G+ + C GE ++ A ++ + +G P + +Y+ +
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE-LDAAVRMVGRLIDQGPKPDVVTYNYLIY 294
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV----------------- 347
L + E + L ++ +G P Y +A K GMV
Sbjct: 295 GLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVP 354
Query: 348 ------------------DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ AL + E + KG P V +YN L+KGL + G A
Sbjct: 355 DEFTYRSLIDGLCHEGETNRALALFNEALGKG-IKPNVILYNTLIKGLSNQGLILEAAQL 413
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+MS++ G + +T+ ILV+GLC+ G +A +++ M+ + Y+P + T+N+LI G
Sbjct: 414 ASEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ K A+ L+ M+ PD+ ++SL+ +C
Sbjct: 473 TQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 209/467 (44%), Gaps = 16/467 (3%)
Query: 31 FKEAKEKYPNYRHNG---PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F +A + Y R G VY+ I + S ++R +++ M CE + T
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + +E LF + +FN LL + K+ ++ L L
Sbjct: 187 VVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKL-LDKVIKR 245
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + + N + LCQ D A+ + + QG PD +Y+ L+ GLC + + EA
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK-SRRH 264
L ++ +G D Y TL+ C G +Q A +IL + G + + R
Sbjct: 306 EVYL----GKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRS 361
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
ID C++GE A +L NEAL +G P++ Y+ + L N+G I+E ++ EM
Sbjct: 362 LIDGL-CHEGE-TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P + + + L K G V +A +++ + KG F P + +NIL+ G
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF-PDIFTFNILIHGYSTQLKME 478
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ L M G + TY L++GLC+ ++ + + M+ + P + T+N+L
Sbjct: 479 NALEILDVMMDN-GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+ LC K +A+ LEEM +++ PD + +L+ C N DL+
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKN-GDLD 583
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 199/477 (41%), Gaps = 50/477 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ +L + + E ++++D++ + I+ + G+L+ AV + L
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N L+ + K SK + A + +L ++ + N L+ C+
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEV-YLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LA + F G PD +Y L+ GLC++ N A ++F KG +++
Sbjct: 337 VQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRAL----ALFNEALGKGIKPNVI 392
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSL 283
+Y TL+ L +QG I +A Q+ ++ KGL P+ + I LC D +G L
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGL-IPEVQTFNILVNGLCKMGCVSDADG---L 448
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + +G P + +++ + + ++ ++LD M G P + Y + L L K
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
++ +E + + KG P + +NILL+ LC A+ L++M K +
Sbjct: 509 TSKYEDVMETYKTMVEKGC-APNLFTFNILLESLCRYHKLDKALGLLEEM-KNKSVNPDA 566
Query: 404 ETYGILVDGLCRDG------------------------------RFLE------ASRVLE 427
T+G L+DG C++G F E A ++ +
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+ R P TY +++ G C G +L EM+ +P ++ ++ +C
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLC 683
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 210/474 (44%), Gaps = 23/474 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T + Q + ++ A+++ ++ P + + Y +I L ++++ E +
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP--KPDVVTYNYLIYGLCKNSKFQEAE 306
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ + E + T I Y + G + A + N V ++ +L+ +
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
E + A LF G +K + N L+ L A + EM +G P+
Sbjct: 367 CHEGETNRALALF-NEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++++IL+ GLC +++A L+ M KG DI + L+ Q K+++A+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMI----SKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 246 QILEKILRKGLKAPKSRRHRI--DLCPCNDGEDI-EGAKSLINEALIRGGIPSLASYSAM 302
+IL+ ++ G+ + + LC + ED+ E K+++ +G P+L +++ +
Sbjct: 482 EILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE----KGCAPNLFTFNIL 537
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV---IEEEMV 359
L ++ + +L+EM+ K P V + + K+G +D A + +EE +
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA-NGETYGILVDGLCRDGR 418
PT YNI++ + N +A ++M + C+ +G TY ++VDG C+ G
Sbjct: 598 VSCSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDR--CLGPDGYTYRLMVDGFCKTGN 652
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ L EM+ + P + T +I LC + YEA + M+ + +P+
Sbjct: 653 VDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 37/214 (17%)
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+G++ E V + M P++ Y A ++ L G D+A +V +G P V
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG-ITPDVY 147
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG---------------- 412
+ I +K C A+ L MS Q GC N Y +V G
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKDEGYELFGK 206
Query: 413 -------------------LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
LC+ G E ++L++++ R P + TYN I+GLC G+
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
AV + +I Q PD+ ++ L+ +C N+
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNS 300
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 153/388 (39%), Gaps = 48/388 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F EA K + N +Y ++I LS I E ++ +M + F
Sbjct: 375 ALALFNEALGK--GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G +++A L K + +FN L+ + K+E A + L
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA-LEILDVMMDNG 491
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N L++ LC+ + + + ++ M +GC P+ +++IL++ LC +L++A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKAL 551
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI--------------- 251
LL M K D V + TL+ C G + A + K+
Sbjct: 552 GLLEEM----KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNI 607
Query: 252 ----LRKGLK---APKSRRHRIDLCPCNDG-------------EDIEGAKSLINEALIRG 291
+ L A K + +D C DG +++ + E + G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
IPSL + + L E R+ E ++ M KG P EA D A
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP-----EAVNTIFDHDKKEVAAP 722
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+++ E+++K + + T Y +L GL D
Sbjct: 723 KLVLEDLLKKSCI-TYYAYELLFDGLRD 749
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 8/439 (1%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L+P + +I +Q++ AL+IF A + + N+ HN Y +MI LS++ M
Sbjct: 95 WPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPM 154
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ +I Q+ +C +++F T IR Y AG+ A+ F + F +SFNTLL
Sbjct: 155 ETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNT 214
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ + + H++F + + + + N+L+ LC+ D A+ V +EM G P
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + + A + F I +G D Y L+ C +G+ DA
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRV----FGEILDRGWVPDPTTYTILMDGYCKKGRFMDA 330
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++++++ ++ I C + + E +L+++ L + IPS A +
Sbjct: 331 VKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE-VLNLLDDMLEKKYIPSSALCCRVID 389
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L EG++ ++ ++ K P + + L K+G V EA ++ +E KG+ +
Sbjct: 390 MLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF-DEFEKGS-I 447
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P+ YN L+ G+C+ G A M ++ GCV N TY +L+ G C+ G E R
Sbjct: 448 PSTLTYNALIAGMCEGGELPEAARLWDNMVEK-GCVPNAFTYNMLIKGFCKVGNAREGIR 506
Query: 425 VLEEMLIRSYWPCVETYNV 443
V+EEML P TY +
Sbjct: 507 VMEEMLDNGCLPNKATYAI 525
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 186/399 (46%), Gaps = 16/399 (4%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+R L+ A+ +F + +F+ N+ ++ T L + K SK A + + KS+
Sbjct: 109 SRQQNLDLALQIFDHAGKFH-RNFAHNYETYLAMIEKLSKARAFEPM--ETLISQLHKSQ 165
Query: 151 IQ-SLNLLMDVLCQ---CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
I+ NL + V+ R LA+ F + G P S++ L+ L ++R +
Sbjct: 166 IKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFD--- 222
Query: 207 HLLYSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L++ MF +K G ++ L+ ALC + I A+++LE++ G P +
Sbjct: 223 -LVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGF-IPNVVTYT 280
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L D+ GA+ + E L RG +P +Y+ + +GR ++ KV+DEM
Sbjct: 281 TILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEEN 340
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P+ V Y + A K+ E L ++++ M++ ++P+ + ++ LC+ G V
Sbjct: 341 RVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD-MLEKKYIPSSALCCRVIDMLCEEGKVEV 399
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A KK+ K+ C + L+ LC++G+ EA ++ +E + P TYN LI
Sbjct: 400 ACELWKKLLKK-NCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPSTLTYNALI 457
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+C G+ EA + M+ + +P+ ++ L+ C
Sbjct: 458 AGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFC 496
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PS+ S++ + L R + R K G P++ + AL K +D A+
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V+EE G F+P V Y +L G G+ A ++ + G V + TY IL+DG
Sbjct: 263 VLEEMPAMG-FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDG 320
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ GRF++A +V++EM P TY V+I C K E + L++M+ + +P
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 473 ISVWSSLVASVCCNTADL 490
+++CC D+
Sbjct: 381 --------SALCCRVIDM 390
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 218/454 (48%), Gaps = 12/454 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I +Q++ AL+IF+ A + PN+ HN Y S+I LS + +
Sbjct: 55 WPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPV 114
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ + +C +++F IR Y AG+ + A+ F + FN +S NTLL
Sbjct: 115 ELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNA 174
Query: 125 MVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
V+ + + H +F RS YG V + + N+L+ LC+ + A+ V EM G
Sbjct: 175 FVQNKRYDLVHAMFKNCRSKYG--VLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGM 232
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y ++ G + + A + +F +G D Y L+ C+QG++
Sbjct: 233 IPNVVTYTTILGGYSSRGDMVNANKVFGELF----DRGWLPDATTYTILMNGYCEQGRLA 288
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
DA+++++ + G++ + + C + + E A++L+++ L R +PS A +
Sbjct: 289 DAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGE-ARNLLDDMLERQYVPSSALCCKV 347
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L G+I E ++ M K P + + L K+G V EA ++ E +G
Sbjct: 348 IDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLF-GEFERGA 406
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
+P++ YN L+ G+C+ G + A M ++ G N TY +L+ G + G E
Sbjct: 407 -IPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEK-GYKPNAFTYNMLIKGFSKIGNAKEG 464
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
R+LEEML P TY +LI LC +G + E
Sbjct: 465 IRILEEMLDNRCMPNKSTYAILIEELCKMGMEGE 498
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 213/476 (44%), Gaps = 14/476 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + +++ Q AL F A ++ Y H+ VY +M+ +LS++ +
Sbjct: 163 RSLKPPLVCAVLRSQADERVALNFFYWADRQW-RYSHHPVVYYTMLDVLSKTKLCQGARR 221
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ M EC F + +Y+RAG+L A+ + + + NT + +V
Sbjct: 222 VLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLV 281
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K KLE A + FL +K I + N L+ C R + AL + + +GC PD+
Sbjct: 282 KGGKLEKA-LKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++++ E L+ M W D V Y TL+ L G DA+
Sbjct: 341 VSYYTVMGFLCKEKKIEEVKCLMEKMVW---NSNLIPDQVTYNTLIHMLSKHGHADDALA 397
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L++ KG K I C G ++ AKSL+ + RG P + +Y+A+
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGR-MDEAKSLVIDMYSRGCNPDVVTYTAIVDGF 456
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEEMVKGTF 363
GRI E K+L +M G P+ V Y A L L G EA E+I EE +
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW----W 512
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y ++ GL G + A ++M ++ G +L+ LC++ + +EA
Sbjct: 513 TPNAITYGAVMHGLRREGKLSEACDLTREMVEK-GFFPTPVEINLLIQSLCQNQKVVEAK 571
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ LEE L + V + +I G C IG A+ L++M K PD +++L
Sbjct: 572 KYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTAL 627
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 195/442 (44%), Gaps = 38/442 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L + +I E+K ++++M +S D V + T I ++ G ++A++ K
Sbjct: 343 YYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 402
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ ++ +++ A L + Y + + ++D C+ R
Sbjct: 403 QDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI-DMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY---SMFW--------- 214
D A + Q+M GC P+ SY L+ GLC+ + EA ++ +W
Sbjct: 462 IDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGA 521
Query: 215 -------------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ +KG V L+ +LC K+ +A + LE+ L KG
Sbjct: 522 VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 581
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ C G D+E A S++++ + G P +Y+A+ L +GR+ E
Sbjct: 582 CAINVVNFTTVIHGFCQIG-DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++ +M +KG P+ V Y + + + G VD+ L ++E+ + + P VYN +++
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ---PFRTVYNQVIE 697
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LCD GN A L K+ + V + T +L++ + G + A +V M R+
Sbjct: 698 KLCDFGNLEEAEKLLGKVLRTASKV-DANTCHVLMESYLKKGVAISAYKVACRMFRRNLT 756
Query: 436 PCVETYNVLIRGLCSIGKQYEA 457
P ++ + + L GK EA
Sbjct: 757 PDLKLCEKVSKKLVLDGKLVEA 778
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 237/491 (48%), Gaps = 43/491 (8%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATA 86
L++ K+ K+ ++H Y SM+ L + EM+ ++ +M+ + + V+ A
Sbjct: 105 LQLIKKTKQ---GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEA 161
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R Y R G++ EAV F+ + FNC S+N ++ +V+ AH +++R +
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKK 220
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC----NDR-- 200
V+S + + + + C+ R AL + + M GC+ + +Y ++ G NDR
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280
Query: 201 ----------------RLNEATHLLYS---------MFWRISQKGSGEDIVIYRTLLFAL 235
N+ H L +F ++ ++G ++ + + L
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI- 293
C +G + A+++L + R+GL+ P + +C C +E + L ++ GG
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLR-PDVVTYNTVICGLCRKSRVVEAEECL--HKMVNGGFE 397
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+ +Y+++ +G +V+ +++L + KGF P Y + + +DG D+A+ V
Sbjct: 398 PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAV 457
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ + KG P++ VYN L+KGLC G A+ + +M+++ GC + TY ++++GL
Sbjct: 458 FKDGLGKG-LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK-GCKPDIWTYNLIINGL 515
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G +A+ ++ + + + P + TYN L+ G C K A+ + M SQ PD+
Sbjct: 516 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDV 575
Query: 474 SVWSSLVASVC 484
+++L+ +C
Sbjct: 576 ITYNTLLNGLC 586
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 216/458 (47%), Gaps = 15/458 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ IL E + +V +MK E + I+++ R G+ A+ L +N+
Sbjct: 193 YNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMP 252
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQC 164
C + ++ T++ + + A LF L C +V + N L+ LC+
Sbjct: 253 VLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDV----TTFNKLVHALCKK 308
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ +F ++ +G P+ +++I ++GLC + L+ A LL +S++G D
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC----VSREGLRPD 364
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V Y T++ LC + ++ +A + L K++ G + + I C G ++ A ++
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVD-ANRIL 423
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+A+ +G P +Y ++ +G + V + KG PS+++Y + L +
Sbjct: 424 KDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQ 483
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G++ AL+++ E KG P + YN+++ GLC G + A +L + GC+ +
Sbjct: 484 GLILPALQLMNEMAEKGC-KPDIWTYNLIINGLCKMGCLSDA-NHLIGDAITKGCIPDIF 541
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY LVDG CR + A ++ M + P V TYN L+ GLC K E + + M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ P+I +++++ S+ CN+ +N L ++ S
Sbjct: 602 TEKGCAPNIITYNTIIESL-CNSKKVNEAVDLLGEMKS 638
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 211/471 (44%), Gaps = 17/471 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T Q + K+ S A+++ + R + Y ++I L +R+ E +
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE--GLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN--LSQFNCVNWTQSFNTLLK 123
E + +M E D + + I Y + G + +A + K+ F +T + +L+
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT--YCSLVN 443
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
++ + A +F + G ++ I N L+ LCQ AL + EM +GC
Sbjct: 444 GFCQDGDPDQAMAVF-KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 502
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y++++ GLC L++A HL+ KG DI Y TL+ C Q K+
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAI----TKGCIPDIFTYNTLVDGYCRQLKLDS 558
Query: 244 AMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A++++ ++ +G+ + + LC E++ + E +G P++ +Y+
Sbjct: 559 AIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE---KGCAPNIITYNT 615
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L N ++ E +L EM++KG P +V + + K G +D A + +
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
T YNI++ + N +A+ +M K GC + TY +L+DG C+ G +
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN-GCDPDNYTYRVLIDGFCKTGNVNQ 734
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ L E + + + P + T+ ++ LC K EAV + M+ + +PD
Sbjct: 735 GYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 213/471 (45%), Gaps = 38/471 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I L R+ E V+++ CE + I +A ++++A L K +
Sbjct: 44 FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C+ T ++ L+ ++K +L+ A + L +++ +++D L + R
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEA-MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A +F +M GC PD Y L+ GL +L+EA L M +G D+VI
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVI 222
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGED--------- 276
+ ++ LC G ++DA+ ++ L L + + LC E+
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281
Query: 277 --------------IEGAKSL---------INEALIRGGIPSLASYSAMAIDLYNEGRIV 313
++G L + EA+ RG IP +Y+++ L GR+
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
EG + EMR +G+ P V Y A + K M+ +A V + + GT V TV YNI+
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV-TYNII 400
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
L GLC AG A A M ++ GCVA TY L+DG C +G A + ML R
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEER-GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + +YN++IRGLC GK +A + E+++ + PD+ ++S + +C
Sbjct: 460 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC 510
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 217/518 (41%), Gaps = 55/518 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPV---YASMIGILSESNRIT 62
P +T T L + K A+ I ++ EK N P Y +I LS++ R+
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEK-----GNSPTLKTYTVVIDGLSKAGRVE 163
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS----F 118
E + + M G+ C V+ I A+ G+L+EA+ + + C +
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N +++++ LE A F ++ + N L+ LC+ R++ A+ ++M
Sbjct: 224 NLVIRQLCASGNLEDALAYFDELDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMS 281
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+ C+P +Y L+ G RL+EA L ++G D V Y +++ LC
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV----ERGFIPDAVTYTSIIDGLCKL 337
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G++++ + ++ +G + P + + + + I A + + L G + S +
Sbjct: 338 GRVEEGCERFHEMRNRGYE-PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 396
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L GR+ E M +G ++V Y A + +G V A+E+ +
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC------------------- 399
+G P + YNI+++GLC AG A A Y +K+ ++ C
Sbjct: 457 DRGC-EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515
Query: 400 VANG----------------ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
V +G +Y IL+DG+CR G + EM+ R P V +N
Sbjct: 516 VGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNT 575
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
LIR LC G+ EA+ E+ ++ S WS L A
Sbjct: 576 LIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDA 613
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 16/370 (4%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T+ LL + K +L+ A +L + + ++++ LC+ +R D A V
Sbjct: 9 TRVCTALLNGLCKTGQLDRAMLLLDE----MPCSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ GC PD +Y++ + GLC R+++A LL M +K V Y L+
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM----DEKKCLPTTVTYTALVDG 120
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
L G++ +AM ILE+++ KG +P + + + + + +E A+ + + L G P
Sbjct: 121 LLKAGRLDEAMAILEQMVEKG-NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMR----TKGFWPSLVMYEAKLAALFKDGMVDEA 350
Y+A+ L G++ E L++M +G P +V++ + L G +++A
Sbjct: 180 DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA 239
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L +E + + T +N L+ LC A + A+ ++KKMS++ C TY LV
Sbjct: 240 LAYFDE--LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER-RCFPTLFTYTSLV 296
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DG + GR EA L+E + R + P TY +I GLC +G+ E EM ++
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356
Query: 471 PDISVWSSLV 480
PD +++L+
Sbjct: 357 PDAVTYAALI 366
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ GLC +L+ A LL M D+V + ++ LC + ++ +A +LE+
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM-------PCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+R G + P +Y+ L R
Sbjct: 68 VRAGCE------------------------------------PDYVTYNVFIDGLCKAER 91
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + ++L +M K P+ V Y A + L K G +DEA+ ++E+ + KG PT++ Y
Sbjct: 92 VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-SPTLKTYT 150
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML- 430
+++ GL AG A M GC + Y L+ GL + G+ EA L +M+
Sbjct: 151 VVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALISGLAKIGKLDEALVYLNQMVE 209
Query: 431 ---IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R P V +N++IR LC+ G +A+ + +E+ L + ++ LVA++C
Sbjct: 210 NGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFT-FNPLVAALC 265
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
A M G SE N ++ E+ +M CE + IR RAG+L +A F+ L Q
Sbjct: 434 ALMDGFCSEGN-VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+FN+ L + + + S + S ++LMD +C+ +
Sbjct: 493 RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLE 552
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+ L +F EM +G PD ++ L++ LC R++EA + +R ++ S D Y
Sbjct: 553 VTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV-----FRELERRSAPDAWSY 607
Query: 229 RTLLFALCDQGKIQDA 244
+LL AL ++++A
Sbjct: 608 WSLLDALSRCERMEEA 623
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 243/541 (44%), Gaps = 75/541 (13%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIF------------------------KEAKEKYP 39
+W L P +S+++++ K P TA+ F + ++ P
Sbjct: 86 QWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIP 145
Query: 40 ---------NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
Y + Y +I L + N+I + ++D+ K + + SV+ R +
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+ G+L +A+ +F+N+ + + ++N ++ +++ + A + FL+ +V
Sbjct: 206 CKTGRLKDALEIFRNIPSPDAI----AYNAIIHGHCRKNDCDGA-LEFLKEMNERKVAPD 260
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+D LC+ ++D A + EM +G PD +++ +M GLC + A LL
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M +++ Y TL+ LC Q + A ++++ + G +
Sbjct: 321 VM----AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G I+ A L+ E +G P+L +Y+ + L + + ++L+ + + GF P
Sbjct: 377 CKRGR-IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + L K+G +D+AL+++ E M+K P+V Y L++GLC G A
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMV-EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494
Query: 391 KKM------------------------SKQVGCVANG-------ETYGILVDGLCRDGRF 419
K+M +K+ V +G + Y L+DG C++GR
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 554
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
E V E+M R P ++TYN+++ GLC GK EA +LE M S +PD+ ++ +
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614
Query: 480 V 480
+
Sbjct: 615 I 615
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 52/482 (10%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYA-------R 92
N R + Y ++I L + + K+++D+ S F + TY+ +
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVS-------SGFVPDVVTYSILADGLCK 378
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
G+++EA L K +S C ++NTL+ + K SK E A+ L L S +
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL-LESLVSSGFVPDVV 437
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ +++D LC+ R D AL + + M +GC P +Y LM+GLC R++EA H+ M
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497
Query: 213 ------------------FWRISQKGSGEDIV----------IYRTLLFALCDQGKIQDA 244
+ + S+ + +V +Y L+ C +G++ +
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 557
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ E + +G P + + I + C G+ ++ A + G +P + SY+ +
Sbjct: 558 PNVFEDMACRGC-VPNIKTYNIVMDGLCKHGK-VDEAFPFLESMHSAGCVPDVVSYNIII 615
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ + E +VLD+M G P V Y +A K+ D+A+ +++ M+K
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN-MIKAGV 674
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEA 422
P YN L+ GL A + +M + GCV + TY ++D LC++G +A
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN-GCVVSACTTYNTIIDRLCKEGCLKQA 733
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+++ M TYN+ I LC G+ EA L EM + L D +++++
Sbjct: 734 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIG 790
Query: 483 VC 484
+C
Sbjct: 791 LC 792
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 213/463 (46%), Gaps = 18/463 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + + A IFKE K + + Y S++ +S+R E +
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V+D ++G V+ + Y + G+L+E ++F++++ CV +++N ++ +
Sbjct: 527 KVVDGIRGTP---YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ A FL S + + S N+++D L + + A V +M G PD
Sbjct: 584 CKHGKVDEA-FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM C + R ++A +L +M + G D V Y TL+ L ++ DA
Sbjct: 643 AVTYNTLMAQFCKEERFDDAVGILKNMI----KAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 246 QILEKILRKG--LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+++ ++LR G + A + ID C +G ++ A L++ G + +Y+
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRL-CKEGC-LKQALLLMDHMTGHGVEANTVTYNIFI 756
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L EGR+ E +L EM T V Y + L K +D A ++ E +
Sbjct: 757 DRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
T +N+L+ A+ L M Q GC + TY +++ LC+ + +A
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMV-QRGCSPSVITYNMVITCLCKLDKVDKAW 872
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+ +EM +R +Y VLI GLC G+ EA+ LEEM S
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 194/443 (43%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + R+ E + +M C + + + Y ++ + EA + +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ +N L+ KE +L E ++ +C G I++ N++MD LC+
Sbjct: 533 RG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG--CVPNIKTYNIVMDGLCKHG 587
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D A + M GC PD SY+I++ GL + EA +L M Q G D
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI----QAGIPPDA 643
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ C + + DA+ IL+ +++ G+ P + + + + + A L++
Sbjct: 644 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMH 702
Query: 286 EALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E L G + S + ID L EG + + ++D M G + V Y + L K+
Sbjct: 703 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 762
Query: 345 GMVDEALEVIEEEMVKGTFVPTVR---VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G +DEA ++ E + T+R Y ++ GLC A A ++M G
Sbjct: 763 GRLDEASSLLSE-------MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
T+ +L+D + R EA +L M+ R P V TYN++I LC + K +A
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+EM + + ++ L+ +C
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLC 898
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 11/330 (3%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N + L + SD +F+ M G PD +YH+++K LC ++++A ++M
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA----FTMLD 184
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ +G ++ +Y L A C G+++DA++I I A + H C ND
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIH--GHCRKND- 241
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+GA + E R P + +Y+ + L + + ++L EM +G P V +
Sbjct: 242 --CDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTF 299
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + L K G + A ++ M + P+ YN L+ GLC N A + +
Sbjct: 300 NSIMDGLCKAGKFERAHSLLAV-MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV 358
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
G V + TY IL DGLC+ GR EA +++EM + P + TYN LI GLC K
Sbjct: 359 SS-GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A LE ++S +PD+ ++ +V +C
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLC 447
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 221/454 (48%), Gaps = 18/454 (3%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESN 59
M +W + +TP+ + ++++ +K ++ +F A +Y N Y H+ + M+ L +N
Sbjct: 6 MMFKWSKNITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSAN 65
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ ++++ +MK ++C + + + R Y R + +++ +F + F+C +++
Sbjct: 66 KFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMD 178
T+L +V+E++L A F ++ + + SLN+L+ LC+ + D L +F EM
Sbjct: 126 TVLAILVEENQLNLA-FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMP 184
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC PD +Y L+ GLC R++EA L F + +K +V Y +L+ LC
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKL----FTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ +AM+ +E++ KG++ + C DG ++ A L + RG P++ +
Sbjct: 241 KNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVT 299
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L E +I E ++LD M +G P +Y ++ EA + +EM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFL-DEM 358
Query: 359 VKGTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ G P V+ N +++GLC S +YL S+ G ET LV
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSR--GISVEVETLDSLVK 416
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
LC+ G F +A ++++E++ P T+ +LI
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 158/367 (43%), Gaps = 54/367 (14%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR------RSDLA 170
SF ++ +V +K +AA + R ++++ + S ++L+ + CR R +
Sbjct: 53 SFGYMVSRLVSANKFKAAEDIVAR----MKIENCVVSEDILLSI---CRGYGRVHRPFDS 105
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L VF +M C P +++Y ++ L + +LN L + + + + G +
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN----LAFKFYKNMREIGLPPTVASLNV 161
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ ALC DA GLK + +E R
Sbjct: 162 LIKALCRNDGTVDA----------GLK-------------------------IFHEMPKR 186
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +Y + L GRI E K+ EM K P++V Y + + L VDEA
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ +EE KG P V Y+ L+ GLC G S A M L +M GC N TY L+
Sbjct: 247 MRYVEEMKGKG-IEPNVFTYSSLMDGLCKDGRSLQA-MELFEMMMARGCRPNMVTYTTLI 304
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC++ + EA +L+ M ++ P Y +I G C++ K EA +L+EMI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGIT 364
Query: 471 PDISVWS 477
P+ W+
Sbjct: 365 PNRLTWN 371
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 294 PSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++AS + + L N+G + G K+ EM +G P Y ++ L + G +DEA +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ E MV+ PTV Y L+ GLC + N A+ Y+++M K G N TY L+DG
Sbjct: 214 LFTE-MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEM-KGKGIEPNVFTYSSLMDG 271
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+DGR L+A + E M+ R P + TY LI GLC K EAV L+ M Q PD
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 473 ISVWSSLVASVC 484
++ +++ C
Sbjct: 332 AGLYGKVISGFC 343
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+V +M+ PS Y LA L ++ ++ A + + M + PTV N+L+K
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKA 165
Query: 377 LC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + G + +M K+ GC + TYG L+ GLCR GR EA ++ EM+ +
Sbjct: 166 LCRNDGTVDAGLKIFHEMPKR-GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY LI GLC EA+ ++EEM + P++ +SSL+ +C
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLC 273
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 11/211 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + L + K L A+++F+ + R N Y ++I L + +I E
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWT---QSF 118
E++D+M + ++ I + + EA + + N + W ++
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N +++ + A + G V+ +++L+ L+ LC+ A+ + E+
Sbjct: 378 NEVVRGLCTNYPSRAFTLYLSMRSRGISVE--VETLDSLVKCLCKKGEFQKAVQLVDEIV 435
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
GC P++ ++ +L+ ++ + EA+ L
Sbjct: 436 TDGCIPNKGTWKLLIGHTLDNTIVGEASDSL 466
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 207/438 (47%), Gaps = 8/438 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I + +I E+ ++M E + T I +G N AV +FK +
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++NT++ + K+ + A + FL G + + N ++ LC +
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDA-MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F+ M+ GC PD +Y+I++ L DR +N+A L M +G D+V
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV----DQGIPPDVV 339
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+L LC G++ +A+++ +K+ +KG K + I C D + A ++E
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD-RLVNDAMEFLSE 398
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG P+ +YS + N G++ E ++ EM + P+ + + + L ++GM
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V EA V E KG P + YN L+ G C A + M + GC + +Y
Sbjct: 459 VSEARWVFETMTEKGV-EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK-GCAPDLHSY 516
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++G C R +A +L +M ++ P TYN +++GLC +G+ +A ++M S
Sbjct: 517 NILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCS 576
Query: 467 QAKLPDISVWSSLVASVC 484
LP + +S L+ +C
Sbjct: 577 SGMLPTLMTYSILLNGLC 594
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 168/340 (49%), Gaps = 7/340 (2%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V + SLN+L++ LC+ D A+ V+ +M G PD ++ L+ G+CN+ ++
Sbjct: 122 FGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKV 181
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L M + G D++ Y TL+ LC+ G A+ + +K+ + G K +
Sbjct: 182 AVELYNEMV----RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYN 237
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C D + A ++E + RG P +Y+++ L G++ E ++ M
Sbjct: 238 TIIDSLCKD-RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P +V Y + +L+KD +V++A + + EMV P V Y +L GLC G
Sbjct: 297 NGCKPDVVTYNIIIDSLYKDRLVNDAADFL-SEMVDQGIPPDVVTYTTILHGLCYLGQLN 355
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ KKM +Q GC + Y ++D LC+D +A L EM+ R P TY+ +
Sbjct: 356 EAIRLFKKM-EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ G C++G+ EA +EM+ + +P+ +S LV +C
Sbjct: 415 LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 208/476 (43%), Gaps = 46/476 (9%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ +FK+ ++ + N Y ++I L + + + + + +M G + +
Sbjct: 217 AVHVFKKMEQN--GCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI 274
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ GQLNEA LFK + Q C ++N ++ + K+ + A FL
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD-FLSEMVDQG 333
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + ++ LC + + A+ +F++M+ +GC PD +Y+ ++ LC DR +N+A
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAM 393
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M R G + V Y T+L C+ G++ +A Q
Sbjct: 394 EFLSEMVDR----GIPPNAVTYSTILHGFCNLGQLDEATQ-------------------- 429
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L E + R +P+ ++S + L EG + E V + M KG
Sbjct: 430 ----------------LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y A + ++EA +V E + KG P + YNIL+ G C++ A
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC-APDLHSYNILINGYCNSRRMDKA 532
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +MS + N TY ++ GLC GR L+A + ++M P + TY++L+
Sbjct: 533 KALLTQMSVK-KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
GLC G EA+ + M + PDI +++ L+ + L V + +LS+
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIG-GKLEVAKGLFSKLSA 646
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 46/367 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++FK+ ++K + + Y ++I L + + + E + +M ++T
Sbjct: 357 AIRLFKKMEQK--GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + GQL+EA LFK + N + T +F+ L+ + +E + A +F +
Sbjct: 415 LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVF-ETMTEKG 473
Query: 147 VKSRIQSLNLLMDVLC-QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V+ I + N LM+ C +C+ ++ A VF+ M +GC PD SY+IL+ G CN RR+++A
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNE-ARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKA 532
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M S K + V Y T++ LC G++ DA ++ +K+ G+
Sbjct: 533 KALLTQM----SVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM--------- 579
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+P+L +YS + L G + E K+ M+ K
Sbjct: 580 ---------------------------LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P +++Y + +F G ++ A + + G P R YN+++KGL G S
Sbjct: 613 KLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG-IQPPGRTYNVMIKGLLKEGLSDE 671
Query: 386 AVMYLKK 392
A +K
Sbjct: 672 AYELFRK 678
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+M K P V + L+ G+C+ G VAV +M + G + +Y L++GLC
Sbjct: 153 KMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS-GHEPDVISYNTLINGLCNS 211
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G A V ++M P V TYN +I LC +A+ +L EM+ + PD +
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271
Query: 477 SSLVASVCC 485
+S+V +CC
Sbjct: 272 NSIVHGLCC 280
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
V+YL G + IL++ LCR A V +M P V T+ LI
Sbjct: 111 TVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLI 170
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
G+C+ GK AV EM+ PD+ +++L+ + CN+ + N+ +++
Sbjct: 171 NGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGL-CNSGNTNMAVHVFKKM 224
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 225/470 (47%), Gaps = 15/470 (3%)
Query: 22 KSPLTAL---KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
++PL A K+FK A K +++ +SMI + S +++++ +++ ++
Sbjct: 52 ENPLEAPISEKMFKSA-PKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ F R Y +A ++AV LF + +F C +SFN++L ++ E
Sbjct: 111 IERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170
Query: 138 F---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+ + S + S NL++ LC+ R D A+ VF+ M + C PD +Y LM
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + R++EA LL M +G VIY L+ LC +G + ++++ + K
Sbjct: 231 GLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C G+ ++ A SL+ + IP+ +Y + L + R +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++L M +G+ + +Y ++ LFK+G +EA+ + + KG P + VY++L+
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 404
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G A L +M GC+ N TY L+ G + G EA +V +EM
Sbjct: 405 DGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+VLI GLC +G+ EA+M +M++ PD +SS++ +C
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 192/472 (40%), Gaps = 38/472 (8%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N NG + +I L + + EV M C + T + + +++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLN 155
V L + C +N L+ + K+ L L FL+ C EV + N
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV-----TYN 296
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC + D A+ + + M C P+ +Y L+ GL RR +A LL SM
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM--- 353
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++G + IY L+ L +GK ++AM + K+ KG K + C +G+
Sbjct: 354 -EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E AK ++N + G +P+ +YS++ + G E +V EM G + Y
Sbjct: 413 PNE-AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-- 393
+ L G V EA+ V + + G P Y+ ++KGLC G+ A+ +M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL----- 448
++ + TY IL+DGLC A +L ML R P V T N + L
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 449 -CSIGKQY---------------EAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G+ + A +E M+ + P S W+ +V +C
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L + KQ+ A+++ +E+ Y N +Y+ +I L + + E
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEER--GYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M C+ V++ + R G+ NEA + + C+ ++++L+K
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K E A ++ +++ ++L+D LC R A+ V+ +M G PD
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKF-CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++KGLC ++ A L + M + K S D+V Y LL LC Q I A+
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK-SQPDVVTYNILLDGLCMQKDISRAV 560
Query: 246 QILEKILRKG 255
+L +L +G
Sbjct: 561 DLLNSMLDRG 570
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 8/439 (1%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L+P + +I +Q++ AL+IF A + + N+ HN Y +MI LS++ M
Sbjct: 95 WPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPM 154
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ +I Q+ +C +++F T IR Y AG+ A+ F + F +SFNTLL
Sbjct: 155 ETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNT 214
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ + + H++F + + + + N+L+ LC+ D A+ V +EM G P
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + + A + F I +G D Y L+ C +G+ DA
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRV----FGEILDRGWVPDPTTYTILMDGYCKKGRFMDA 330
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++++++ ++ I C + + E +L+++ L + IPS A +
Sbjct: 331 VKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE-VLNLLDDMLEKKYIPSSALCCRVID 389
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L EG++ ++ ++ K P + + L K+G V EA ++ +E KG+ +
Sbjct: 390 MLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF-DEFEKGS-I 447
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P+ YN L+ G+C+ G A M ++ GCV N TY +L+ G C+ G E R
Sbjct: 448 PSTLTYNALIAGMCEGGELPEAARLWDNMVEK-GCVPNAFTYNMLIKGFCKVGNAREGIR 506
Query: 425 VLEEMLIRSYWPCVETYNV 443
V+EEML P TY +
Sbjct: 507 VMEEMLDNGCLPNKATYAI 525
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 186/399 (46%), Gaps = 16/399 (4%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+R L+ A+ +F + +F+ N+ ++ T L + K SK A + + KS+
Sbjct: 109 SRQQNLDLALQIFDHAGKFH-RNFAHNYETYLAMIEKLSKARAFEPM--ETLISQLHKSQ 165
Query: 151 IQ-SLNLLMDVLCQ---CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
I+ NL + V+ R LA+ F + G P S++ L+ L ++R +
Sbjct: 166 IKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFD--- 222
Query: 207 HLLYSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L++ MF +K G ++ L+ ALC + I A+++LE++ G P +
Sbjct: 223 -LVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGF-IPNVVTYT 280
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L D+ GA+ + E L RG +P +Y+ + +GR ++ KV+DEM
Sbjct: 281 TILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEEN 340
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P+ V Y + A K+ E L ++++ M++ ++P+ + ++ LC+ G V
Sbjct: 341 RVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD-MLEKKYIPSSALCCRVIDMLCEEGKVEV 399
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A KK+ K+ C + L+ LC++G+ EA ++ +E + P TYN LI
Sbjct: 400 ACELWKKLLKK-NCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPSTLTYNALI 457
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+C G+ EA + M+ + +P+ ++ L+ C
Sbjct: 458 AGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFC 496
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PS+ S++ + L R + R K G P++ + AL K +D A+
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V+EE G F+P V Y +L G G+ A ++ + G V + TY IL+DG
Sbjct: 263 VLEEMPAMG-FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDG 320
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ GRF++A +V++EM P TY V+I C K E + L++M+ + +P
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 473 ISVWSSLVASVCCNTADL 490
+++CC D+
Sbjct: 381 --------SALCCRVIDM 390
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 216/452 (47%), Gaps = 38/452 (8%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN++H+ +++MI IL S R+ + + VI +M S + + + + TY
Sbjct: 126 PNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYG------- 178
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV-KSR-----IQ 152
NC + F+ L++ V+ KL C + V KS+ I
Sbjct: 179 -----------NCGSNPLVFDLLVRTYVQARKLREG-------CEAFRVLKSKGLCVSIN 220
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L+ L + DLA ++QE+ G + + +I++ LC ++++ L M
Sbjct: 221 ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 280
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+KG D+V Y TL+ A C QG +++A ++++ + KGLK + I C
Sbjct: 281 ----EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 336
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+ + AK +++E L G P A+Y+ + ++ +++ +++ DEM ++G P LV
Sbjct: 337 TGKYLR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 395
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ A + L K+G +D+AL+ + M P +Y IL+ G C G + A+ +
Sbjct: 396 SFSALIGLLSKNGCLDQALKYFRD-MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M +Q GCV + TY +++GLC++ EA + EM R +P T+ LI G G
Sbjct: 455 MLEQ-GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 513
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+AV E MI + PD+ +++L+ C
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 545
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 18/467 (3%)
Query: 15 SQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGD 74
+Q I+ KS L+ + E K +P+ Y ++I + E E++D M G
Sbjct: 267 NQKIENTKSFLSDM----EEKGVFPDV----VTYNTLINAYCRQGLLEEAFELMDSMSGK 318
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+ + I + G+ A + + + T ++N LL E + + A
Sbjct: 319 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F V + S + L+ +L + D AL F++M G PD Y IL+
Sbjct: 379 ERIF-DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C + ++EA + M ++G D+V Y T+L LC + + +A ++ ++ +
Sbjct: 438 GFCRNGVMSEALKVRDEML----EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ P + + ++ A +L + R P + +Y+ + ID + +G +E
Sbjct: 494 GV-FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL-IDGFCKGSEME 551
Query: 315 G-DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+++ ++M ++ +P+ + Y + G V EA + +EMV+ F T+ N +
Sbjct: 552 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR-LWDEMVEKGFEATIITCNTI 610
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KG C AGN+ A +L M + G V +G TY L++G ++ A ++ +M
Sbjct: 611 VKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYNV++ G G+ EA + + +MI + PD S ++SL+
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 8/426 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + K V+D+M + + + R + +A +F +
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V SF+ L+ + K L+ A + + R + +L+ C+
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQA-LKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V EM QGC D +Y+ ++ GLC ++ L+EA L F ++++G D
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL----FTEMTERGVFPDFY 500
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ G + A+ + E ++++ LK P + + G ++E L N+
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLK-PDVVTYNTLIDGFCKGSEMEKVNELWND 559
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ R P+ SY + N G + E ++ DEM KGF +++ + + G
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A E + ++KG VP YN L+ G N A + KM G + + TY
Sbjct: 620 AVKADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITY 677
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++++G R GR EA ++ +M+ R P TY LI G + EA +EM+
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 737
Query: 467 QAKLPD 472
+ +PD
Sbjct: 738 RGFVPD 743
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 162/396 (40%), Gaps = 67/396 (16%)
Query: 110 NCVNWT---QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC N+ QSF+ ++ +V+ +L A + LR V SR++ + L+ C
Sbjct: 124 NCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGV-SRVEIVESLVLTYGNCGS 182
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ L + +L++ R+L E F + KG I
Sbjct: 183 NPLV------------------FDLLVRTYVQARKLREGCE----AFRVLKSKGLCVSIN 220
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+LL L G + A +I ++++R G++ + + C + + IE KS
Sbjct: 221 ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKN-QKIENTKSF--- 276
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +M KG +P +V Y + A + G+
Sbjct: 277 --------------------------------LSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++EA E+++ KG P V YN ++ GLC G A L +M K +G + TY
Sbjct: 305 LEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATY 362
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+ CR+ ++A R+ +EM + P + +++ LI L G +A+ + +M +
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 467 QAKLPDISVWSSLVASVCCN---TADLNVCRKTLEQ 499
PD +++ L+ C N + L V + LEQ
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 458
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ EG + +++KG S+ + L L K G VD A E+ +E + G V V
Sbjct: 199 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTL 257
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI++ LC +L M ++ G + TY L++ CR G EA +++ M
Sbjct: 258 NIMINALCKNQKIENTKSFLSDMEEK-GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 316
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ PCV TYN +I GLC GK A L+EM+ PD + ++ L+ CC ++
Sbjct: 317 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNM 375
Query: 491 NVCRKTLEQLSS 502
+ +++ S
Sbjct: 376 MDAERIFDEMPS 387
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 234/484 (48%), Gaps = 26/484 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ L+P + +++K +K+P +AL IF ++ ++P Y H V+ ++ L + + +
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIF-DSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKE 124
+++ ++ C+C + V T I+ YA+ ++A+ +F+ + + F C +S+N+LL
Sbjct: 64 RIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 125 MVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+++ +K + A FL G + +Q+ N+L+ + C+ ++ D A + M QG
Sbjct: 124 LIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY L+ L + +++A L F + ++G D+ Y L+ +G I +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKL----FDEMPERGVTPDVACYNILIDGFFKKGDILN 237
Query: 244 AMQILEKILRKGLKAPKSRRHRI---DLCPCND-GEDIEGAKSLINEALIRGGIPSLASY 299
A +I E++L+ P + + LC C E E + RG L +Y
Sbjct: 238 ASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RG--QDLYTY 293
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE---VIEE 356
S + L G + +V EM G P +V+Y L + G ++E LE V+E+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E + TV YNIL++GL + A+ + + ++ C A+ TYG+LV GLC++
Sbjct: 354 EGCR-----TVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKN 407
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +A +LEE Y+ +I GLC G+ E L++M P+ V
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467
Query: 477 SSLV 480
++++
Sbjct: 468 NAVI 471
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 213/471 (45%), Gaps = 41/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I I + + KE+++ M + T I + A+ G +++A+ LF
Sbjct: 148 NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLF 207
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +N L+ K+ + A ++ R G V I S N++++ LC+
Sbjct: 208 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
C + D + ++ M D +Y L+ GLC L+ AT + M ++ G
Sbjct: 268 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM----AENGVSP 323
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI----------------D 267
D+V+Y T+L G+I++ +++ + + ++G + S I +
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 383
Query: 268 LCP----CND----GEDIEG--AKSLINEALI--------RGGIPSLASYSAMAIDLYNE 309
L P C D G + G +N+AL RG + + A YS+M L E
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCRE 442
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR+ E VLD+M G P+ + A + + +++AL + KG F PTV
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVT 501
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ GL A + A +K+M + G N TY +L++GLC+ + A + +
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
L + + P V+ +N++I GLCS GK +A+ EM + +P++ ++L+
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 234/484 (48%), Gaps = 26/484 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ L+P + +++K +K+P +AL IF ++ ++P Y H V+ ++ L + + +
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIF-DSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKE 124
+++ ++ C+C + V T I+ YA+ ++A+ +F+ + + F C +S+N+LL
Sbjct: 64 RIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 125 MVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+++ +K + A FL G + +Q+ N+L+ + C+ ++ D A + M QG
Sbjct: 124 LIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY L+ L + +++A L F + ++G D+ Y L+ +G I +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKL----FDEMPERGVTPDVACYNILIDGFFKKGDILN 237
Query: 244 AMQILEKILRKGLKAPKSRRHRI---DLCPCND-GEDIEGAKSLINEALIRGGIPSLASY 299
A +I E++L+ P + + LC C E E + RG L +Y
Sbjct: 238 ASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RG--QDLYTY 293
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE---VIEE 356
S + L G + +V EM G P +V+Y L + G ++E LE V+E+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E + TV YNIL++GL + A+ + + ++ C A+ TYG+LV GLC++
Sbjct: 354 EGCR-----TVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKN 407
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +A +LEE Y+ +I GLC G+ E L++M P+ V
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467
Query: 477 SSLV 480
++++
Sbjct: 468 NAVI 471
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 219/458 (47%), Gaps = 21/458 (4%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
K P+ N P Y MI L + + E E+ +MK + ++T I +G L
Sbjct: 247 KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNL 306
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----I 151
+ A ++K +++ +NT+L ++ ++E L W+V + +
Sbjct: 307 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL-------WKVMEKEGCRTV 359
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S N+L+ L + + D A+ +++ + + C D +Y +L+ GLC + LN+A +L
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419
Query: 212 MFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
++ G G+ D Y +++ LC +G++ + +L+++ + G K P +
Sbjct: 420 -----AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK-PNPHVCNAVING 473
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+E A + +G P++ +Y+ + L R E ++ EM KG+ P+
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y + L + +D AL + + + KG F P V+++NI++ GLC +G A+
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLY 592
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M KQ CV N T+ L++G + F AS++ + +L P + +YN+ ++GLCS
Sbjct: 593 SEM-KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCS 651
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
+ +AV +L + + + LP W+ LV +V N A
Sbjct: 652 CHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGA 689
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 214/471 (45%), Gaps = 41/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I I + + KE+++ M + T I + A+ G +++A+ LF
Sbjct: 148 NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLF 207
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +N L+ K+ + A ++ R G V I S N++++ LC+
Sbjct: 208 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
C + D + ++ M D +Y L+ GLC L+ AT + M ++ G
Sbjct: 268 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM----AENGVSP 323
Query: 224 DIVIYRTLLFALCDQGKIQDAMQ---ILEK----------ILRKGLKAPKSRRHRI---D 267
D+V+Y T+L G+I++ ++ ++EK IL +GL I +
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 383
Query: 268 LCP----CND----GEDIEG--AKSLINEALI--------RGGIPSLASYSAMAIDLYNE 309
L P C D G + G +N+AL RG + + A YS+M L E
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCRE 442
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR+ E VLD+M G P+ + A + + +++AL + KG F PTV
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVT 501
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ GL A + A +K+M + G N TY +L++GLC+ + A + +
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
L + + P V+ +N++I GLCS GK +A+ EM + +P++ ++L+
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 221/454 (48%), Gaps = 18/454 (3%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESN 59
M +W + +TP+ + ++++ +K ++ +F A +Y N Y H+ + M+ L +N
Sbjct: 6 MMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSAN 65
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ +++I +MK ++C + + + R Y R + +++ +F + F+C +++
Sbjct: 66 KFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMD 178
T+L +V+E++L A F ++ + + SLN+L+ LC+ + D L +F EM
Sbjct: 126 TVLAILVEENQLNLA-FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC PD +Y L+ GLC R++EA L F + +K +V Y +L+ LC
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKL----FTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ +AM+ LE++ KG++ + C DG ++ A L + RG P++ +
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVT 299
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L E +I E ++LD M +G P +Y ++ EA + +EM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL-DEM 358
Query: 359 VKGTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ G P V+ N +++GLC S +YL S+ G ET LV
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSR--GISVEVETLESLVK 416
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
LC+ G F +A ++++E++ P T+ +LI
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 163/373 (43%), Gaps = 56/373 (15%)
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR------ 165
V+ SF ++ +V +K +AA L +R ++++ + S ++L+ + CR
Sbjct: 48 VHDQSSFGYMVLRLVSANKFKAAEDLIVR----MKIENCVVSEDILLSI---CRGYGRVH 100
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R +L VF +M C P +++Y ++ L + +LN L + + + + G +
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN----LAFKFYKNMREIGLPPTV 156
Query: 226 VIYRTLLFALC-DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
L+ ALC + G + ++I L+ PK
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIF-------LEMPK------------------------ 185
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
RG P +Y + L GRI E K+ EM K P++V Y + + L
Sbjct: 186 -----RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
VDEA+ +EE KG P V Y+ L+ GLC G S A M L +M GC N
Sbjct: 241 KNVDEAMRYLEEMKSKG-IEPNVFTYSSLMDGLCKDGRSLQA-MELFEMMMARGCRPNMV 298
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+ GLC++ + EA +L+ M ++ P Y +I G C+I K EA +L+EM
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 465 ISQAKLPDISVWS 477
I P+ W+
Sbjct: 359 ILGGITPNRLTWN 371
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 294 PSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++AS + + L N+G + G K+ EM +G P Y ++ L + G +DEA +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ E MV+ PTV Y L+ GLC + N A+ YL++M K G N TY L+DG
Sbjct: 214 LFTE-MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYSSLMDG 271
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+DGR L+A + E M+ R P + TY LI GLC K EAV L+ M Q PD
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 473 ISVWSSLVASVC 484
++ +++ C
Sbjct: 332 AGLYGKVISGFC 343
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+V +M+ PS Y LA L ++ ++ A + + M + PTV N+L+K
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKA 165
Query: 377 LC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + G + +M K+ GC + TYG L+ GLCR GR EA ++ EM+ +
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKR-GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY LI GLC EA+ +LEEM S+ P++ +SSL+ +C
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 61/495 (12%)
Query: 5 WPRLLTPTYLS------------QIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYA 49
W RLL P L Q+ K + PL T+++IFK A + Y H+ VY
Sbjct: 50 WERLLKPFDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQ-KGYCHSFSVYY 108
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+I L + + ++ QMK + ++S+F ++ Y RAG +A L ++
Sbjct: 109 LLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGV 168
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C + +S N+++DVL +
Sbjct: 169 YCC-----------------------------------EPSFRSYNVVLDVLVVGNCPSV 193
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A +VF +M +G P+ ++ ++MK LC ++ A LL M ++ G + +IY+
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDM----TKHGCVPNSMIYQ 249
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ AL + ++ +A+++LE++ G + + + C +EGAK L++ ++
Sbjct: 250 TLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAK-LVDRMIL 308
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G P+ +Y + L RI E +L ++ P++V + + ++G ++E
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNE 364
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A + ++M+ +VP V ++ L+ GLC G A+ + M + GC N TY IL
Sbjct: 365 ATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK-GCKPNLNTYTIL 423
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ G+ EA +L EML + + YN LI LC GK +EA+ EM S+
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483
Query: 470 LPDISVWSSLVASVC 484
PDI ++SL+ +C
Sbjct: 484 KPDIFTFNSLIFGLC 498
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 195/422 (46%), Gaps = 11/422 (2%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
NR+ E +++D+M D + + + +++EA +L + N V+ F
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVH----F 349
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
NTL+ V+ +L A + + + L++ LC+ AL + +MD
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC P+ +Y IL+ G C +L EA +L M KG + V Y L+ ALC
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML----TKGFSLNTVGYNALISALCKH 465
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
GKI +A+ + ++ KG K + + C E +E A +L + ++ G I + +
Sbjct: 466 GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE-MEDALALYRDMVLEGVIANSVT 524
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++ + G I E K++++M +G + Y + AL K G V++ L + EE M
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE-M 583
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
++ P++ NIL+ G C AG A+ +++ M + G + TY L++GLC+ GR
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR-GFSPDIVTYNSLINGLCKRGR 642
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA + E++ P TYN LI LC G +A L + +P+ W+
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702
Query: 479 LV 480
LV
Sbjct: 703 LV 704
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 212/504 (42%), Gaps = 63/504 (12%)
Query: 24 PLTALKIFKEAKEKY---PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
P A ++ + K Y P++R Y ++ +L N + V M D
Sbjct: 155 PGQATRLLLDMKGVYCCEPSFRS----YNVVLDVLVVGNCPSVASNVFYDMLSKGVSPND 210
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL--- 137
F ++ +++ A L +++++ CV + + TL+ + K +++ A L
Sbjct: 211 YTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEE 270
Query: 138 -FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
FL C + + N ++ C+ R + M +G P+ +Y LM GL
Sbjct: 271 MFLMGC-----PPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGL 325
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ-ILEKILRKG 255
C R++EA LL K G ++V + TL+ G++ +A + +K++ G
Sbjct: 326 CKTCRIDEAQALL--------SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ C G A L+N+ +G P+L +Y+ + +G++ E
Sbjct: 378 YVPDVFTFSTLVNGLCKKGL-FGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+L EM TKGF + V Y A ++AL K G + EAL++ E KG P + +N L+
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC-KPDIFTFNSLIF 495
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS-- 433
GLC A+ + M + G +AN T+ L+ R G EA +++ +ML R
Sbjct: 496 GLCRVDEMEDALALYRDMVLE-GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCP 554
Query: 434 ---------------------------------YWPCVETYNVLIRGLCSIGKQYEAVMW 460
P + T N+LI G C+ GK + A+ +
Sbjct: 555 LDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEF 614
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+ +MI + PDI ++SL+ +C
Sbjct: 615 MRDMIHRGFSPDIVTYNSLINGLC 638
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 213/456 (46%), Gaps = 50/456 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA-- 84
A K F E K + + + SMIG+L ++ R+ E E+ +++ DS + V+A
Sbjct: 291 AWKFFHELKSQ--GLVPDDVTFTSMIGVLCKAERVDEAVELFEEL--DSNKSVPCVYAYN 346
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T I Y G+ NEA SL + + C+ ++N +L + ++ K+E A L +
Sbjct: 347 TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA--LRILEAMK 404
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + S N+L+D+LC+ + AL V M G +P+ + +I++ LC +RL+E
Sbjct: 405 MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A S+F + K D V + +L+ L GK+ DA + EK+L G
Sbjct: 465 AC----SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG--------- 511
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
P+ Y+++ + + GR +G K+ EM
Sbjct: 512 ---------------------------QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMH 544
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P L++ + +FK G +++ + EE +G P VR Y+IL+ GL G S
Sbjct: 545 RGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSK 603
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+M +Q G + Y I++DG C+ G+ +A ++LEEM + P V TY +
Sbjct: 604 DTYKLFYEMKEQ-GLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I GL I + EA M EE S+A ++ V+SSL+
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 195/464 (42%), Gaps = 22/464 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P L + L ++ K ALK+ KE +PN MI L ++ R+ E
Sbjct: 409 PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNI----ITVNIMIDRLCKAQRLDE 464
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + C F + I R G++N+A L++ + + +L++
Sbjct: 465 ACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524
Query: 124 EMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
K + E H ++ R C + LN MD + + + +F+E+
Sbjct: 525 NFFKCGRKEDGHKIYKEMMHRGC-----SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKA 579
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
QG PD SY IL+ GL + Y +F+ + ++G D Y ++ C G
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKDT----YKLFYEMKEQGLHLDTRAYNIVIDGFCKSG 635
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
K+ A Q+LE++ KGL+ P + + + ++ A L EA + ++ Y
Sbjct: 636 KVNKAYQLLEEMKTKGLQ-PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVY 694
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S++ GRI E +L+E+ KG P+ + L AL K +DEAL V + M
Sbjct: 695 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL-VCFQNMK 753
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
P Y+I++ GLC A ++ ++M KQ G N TY ++ GL R G
Sbjct: 754 NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ-GLKPNTITYTTMISGLARVGNV 812
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
LEA + E P YN +I GL + K +A + EE
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 157/394 (39%), Gaps = 68/394 (17%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ N L+ ++ + R + + +EM G P + ++ R+L EA ++ +
Sbjct: 133 EAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET 192
Query: 212 M-------------------------------FWRISQKGSGEDIVIYRTLLFALCDQGK 240
M ++ + G + ++ TL+ +G+
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGR 252
Query: 241 IQDAMQILEKILRKGLKAPK----------SRRHRID-------------LCPCN----- 272
+ A+ +L+++ A + ++D L P +
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS 312
Query: 273 ------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
E ++ A L E +P + +Y+ M + + G+ E +L+ + KG
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS++ Y L L + G V+EAL ++E +K P + YNIL+ LC AG A
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEA--MKMDAAPNLTSYNILIDMLCKAGELEAA 430
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ M K+ G N T I++D LC+ R EA + + + P T+ LI
Sbjct: 431 LKVQDSM-KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL GK +A M E+M+ + P+ V++SL+
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 63/399 (15%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + R + ++ +M C + + +AG++ + +LF
Sbjct: 515 NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF 574
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLM 158
+ + +S++ L+ +VK + + LF +E+K + ++ N+++
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLF------YEMKEQGLHLDTRAYNIVI 628
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D C+ + + A + +EM +G P +Y ++ GL RL+EA Y +F
Sbjct: 629 DGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKS 684
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS-----------RRHRID 267
K ++V+Y +L+ G+I +A ILE++++KGL P + + ID
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL-TPNTYTWNCLLDALVKAEEID 743
Query: 268 ------------LCPCNDGEDIEGAKSL-----INEALI-------RGGIPSLASYSAMA 303
CP N+ L N+A + +G P+ +Y+ M
Sbjct: 744 EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L G ++E + + ++ G P Y A + L +A + EE +KG
Sbjct: 804 SGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG-- 861
Query: 364 VPTVRVYN----ILLKGLCDAG---NSAVAVMYLKKMSK 395
R+Y+ +LL L A +A+ L++M+K
Sbjct: 862 ---CRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 897
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L+EM GF PS +A+ K + EA VIE M K F P Y L+
Sbjct: 152 EQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET-MRKFKFRPAYSAYTTLI- 209
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G A + A ++ L + +++G + L+ R+GR A +L+EM S+
Sbjct: 210 GALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFN 269
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ YNV I +GK A + E+ SQ +PD ++S++ +C
Sbjct: 270 ADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLC 318
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 227/493 (46%), Gaps = 42/493 (8%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
+IFK ++ ++ +Y+ + +I + S + +V+D+MK + +++F +
Sbjct: 50 QIFK-SRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFK 108
Query: 89 TYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+A EAV+ F ++ +C +SFN++L +++E A +L +G
Sbjct: 109 ACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH-VFGANS 167
Query: 148 KS---RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
K + + NL++ LC+ + D A+ F+EM + C PD +Y LM GLC +RR++E
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227
Query: 205 ATHLLYSM------------------------FWRISQ-------KGSGEDIVIYRTLLF 233
A LL M R ++ KG + V Y TL+
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC +GK+ A+ +LEK++ P + + E ++ RG
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKC-VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
+ YS++ L+ EG+ ++ EM KG P++V+Y A + L +D DEA ++
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++E + KG F+P Y+ L+KG G+S A++ K+M Q N +L++GL
Sbjct: 407 LQEMLSKG-FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ-DMRHNVVCCSVLLNGL 464
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ--AKLP 471
C GR EA V ML P V Y+ +I+GLC +G + + EM Q P
Sbjct: 465 CESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 524
Query: 472 DISVWSSLVASVC 484
D+ ++ L ++C
Sbjct: 525 DVVTYNILFNALC 537
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 204/470 (43%), Gaps = 37/470 (7%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y +I L + +I + +M +C ++T + + +++EAV
Sbjct: 170 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 229
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNL 156
L + C+ +FN L+ + K L A L FL+ C EV + N
Sbjct: 230 FLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV-----TYNT 284
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC + D AL + ++M C P++ +Y ++ GL RR + H+L SM
Sbjct: 285 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM---- 340
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++G + IY +L+ L +GK ++A+++ +++ KG K C D E
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD-EK 399
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A+ ++ E L +G +P+ +YS++ + +G + V EM ++ ++V
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS-K 395
L L + G + EAL V + +G P V Y+ ++KGLCD G+ + +M +
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 518
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV------------ 443
+ + TY IL + LCR A +L ML P T N+
Sbjct: 519 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 578
Query: 444 ---------LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ L ++ A+ +EEM+ + P+ S WS ++ C
Sbjct: 579 QDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTC 628
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
KQ+ + I +E+ + N +Y+S+I L + + + +M C+
Sbjct: 326 KQRRAEDGVHILMSMEER--GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 383
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
V+ I R + +EA + + + + ++++L+K K+ + A IL
Sbjct: 384 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKA-ILVW 442
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ +++ + ++L++ LC+ R AL V+ M +G PD +Y ++KGLC+
Sbjct: 443 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 502
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+++ L Y M + + S D+V Y L ALC Q + A+ +L +L +G
Sbjct: 503 GSVDKGLKLFYEM--QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VLD M+ +G + ++ A K + EA+ TV+ +N +L
Sbjct: 86 QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 145
Query: 377 LCDAGNSAVAVMYLKKM--SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+ G+ + A + + + G N TY +++ LC+ G+ A EM +++
Sbjct: 146 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 205
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P V TY+ L+ GLC + EAV L+EM ++ LP+ ++ L+ ++ N DL+
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN-GDLSRAA 264
Query: 495 KTLEQL 500
K ++ +
Sbjct: 265 KLVDNM 270
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 224/485 (46%), Gaps = 15/485 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + + L + K K + AL+ F+ + + +Y +++ L + R+ +
Sbjct: 42 PNVFLCSILIDGLCKAKRSIDALRCFRAMQGS--GIVADTVIYTALLSGLWKEKRLDQAL 99
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ CE + + I + + + A LF+++ C ++NTLL +
Sbjct: 100 AILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGL 159
Query: 126 VKESKLEAAHILFL----RSCYGWEVK--SRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+ KLE A LF R + + + + + ++L+D LC+ R A+ + + M
Sbjct: 160 FRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKA 219
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+GC PD +Y IL+ GLC + ++ A +L M G ++V Y +LL LC
Sbjct: 220 RGCSPDVITYTILVDGLCKESKVAAAWEVLREML----DAGCVPNLVTYNSLLHGLCRAR 275
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ DA+ ++ + +G + C G ++ A +++ + + +GG P L Y
Sbjct: 276 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR-VKDACAMLADMIDKGGTPDLMIY 334
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L ++ E +L + G P +V Y + + L + +DEA ++
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G P V +Y+ L+ GLC AG A + M+ GC A+ TY L+DGLC+ GR
Sbjct: 395 RGC-PPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGD-GCDADVVTYSTLIDGLCKAGRV 452
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +L M+ P TYN LI+GLC + EA+ +EEM P ++ L
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512
Query: 480 VASVC 484
+ +C
Sbjct: 513 IHGMC 517
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 225/477 (47%), Gaps = 22/477 (4%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K+K AL I E ++ N Y S+I L ++N +E+ + MK C
Sbjct: 91 KEKRLDQALAILHEMRDH--GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPS 148
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNL-------SQFNCVNWTQSFNTLLKEMVKESKLE 132
+ T + R G+L A++LF+ + C +++ L+ + K +++
Sbjct: 149 MVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVS 208
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A + L S + + +L+D LC+ + A V +EM GC P+ +Y+ L
Sbjct: 209 QA-VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 267
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ GLC RR+++A L+ M R G ++V Y TL+ LC G+++DA +L ++
Sbjct: 268 LHGLCRARRVSDALALMRDMTCR----GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 323
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG P + + + + ++ + +L+ A+ G P + +YS++ L R+
Sbjct: 324 DKG-GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 382
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++L ++++G P +++Y + L K G VDEA ++ E G V Y+
Sbjct: 383 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV-TYST 441
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ GLC AG A + L +M + +G + TY L+ GLC EA ++EEM
Sbjct: 442 LIDGLCKAGRVDEAHLLLARMVR-MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 500
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEE-----MISQAKLPDISVWSSLVASVC 484
+ P TYN+LI G+C + + AV+ LE+ + + D +SSL+ +C
Sbjct: 501 NCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 36/409 (8%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C+ +A +R + R G++++A F + N V + L+ + K + A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
F R+ G + + L+ L + +R D AL + EM GC P+ +Y+ L+ G
Sbjct: 65 RCF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + + A L F + +V Y TLL L GK++ AM + +++L +
Sbjct: 124 LCKNNEPDRAQEL----FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR- 178
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
R H +D C+ P++ +YS + L R+ +
Sbjct: 179 ------RSHDMDD-RCS---------------------PNVITYSVLIDGLCKANRVSQA 210
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++L+ M+ +G P ++ Y + L K+ V A EV+ E M+ VP + YN LL
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE-MLDAGCVPNLVTYNSLLH 269
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC A + A+ ++ M+ + GC N TYG L+DGLC+ GR +A +L +M+ +
Sbjct: 270 GLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + YN+LI GLC + E++ L +S PD+ +SS++ +C
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 201/442 (45%), Gaps = 9/442 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
YA+++ I + + D+M+ + + + I +A + +A+ F+ +
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
V T + LL + KE +L+ A IL +G E + + N L+D LC+
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCE--PNVVTYNSLIDGLCKNN 128
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS---G 222
D A +F+ M C P +Y+ L+ GL +L A L M R S
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+++ Y L+ LC ++ A+++LE + +G +P + I + + A
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGC-SPDVITYTILVDGLCKESKVAAAWE 247
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++ E L G +P+L +Y+++ L R+ + ++ +M +G P++V Y + L
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G V +A ++ + + KG P + +YN+L+ GLC A ++ L++ + G +
Sbjct: 308 KVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRR-AVSGGIKPD 365
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY ++ GLCR R EA R+L + R P V Y+ LI GLC GK EA E
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M D+ +S+L+ +C
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLC 447
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 217/493 (44%), Gaps = 63/493 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAK--EKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T L + K P A ++F+ K E P+ Y +++ L + ++
Sbjct: 112 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSM----VTYNTLLDGLFRTGKLER 167
Query: 64 ----MKEVIDQMK---GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
+E++D+ D C ++ I +A ++++AV L +++ C
Sbjct: 168 AMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 227
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++ L+ + KESK+ AA + LR + + N L+ LC+ RR AL + ++
Sbjct: 228 TYTILVDGLCKESKVAAAWEV-LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 286
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +GC P+ +Y L+ GLC R+ +A +L M KG D++IY L+ LC
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI----DKGGTPDLMIYNMLINGLC 342
Query: 237 DQGKIQDAMQILEKILRKGLKAPK----------SRRHRIDL------------CP---- 270
++ +++ +L + + G+K R +R+D CP
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 402
Query: 271 ---------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
C G+ ++ A L G + +YS + L GR+ E +L
Sbjct: 403 LYSTLIDGLCKAGK-VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G PS + Y + + L +DEA+E++EE M + P+ YNIL+ G+C
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE-MERSNCAPSAVTYNILIHGMCRME 520
Query: 382 NSAVAVMYLKKMSKQVGCVANGET------YGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
AV+ L++ + CVA G T Y L+DGLC+ GR EA +EM+
Sbjct: 521 RVDSAVVLLEQAKAR--CVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVI 578
Query: 436 PCVETYNVLIRGL 448
P TY++L+ GL
Sbjct: 579 PDHITYSILLEGL 591
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 162/365 (44%), Gaps = 23/365 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T L + + + AL + ++ + N Y ++I L + R+ +
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMRDMTCR--GCTPNVVTYGTLIDGLCKVGRVKDAC 316
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M ++ I +A Q++E+++L + ++++++ +
Sbjct: 317 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 376
Query: 126 VKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+ ++L+ A L L VKSR + + L+D LC+ + D A +++ M
Sbjct: 377 CRSNRLDEACRLLLY------VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGD 430
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC D +Y L+ GLC R++EA HLL + R+ + G+ + Y +L+ LCD
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEA-HLLLA---RMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR-----GGIPS 295
+ +A++++E++ R AP + + I + E ++ A L+ +A R G
Sbjct: 487 LDEAIELVEEMERSNC-APSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALD 545
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+YS++ L GR+ E EM G P + Y L L K + E ++
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVL 605
Query: 356 EEMVK 360
++MV+
Sbjct: 606 DQMVQ 610
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 227/493 (46%), Gaps = 42/493 (8%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
+IFK ++ ++ +Y+ + +I + S + +V+D+MK + +++F +
Sbjct: 74 QIFK-SRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFK 132
Query: 89 TYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+A EAV+ F ++ +C +SFN++L +++E A +L +G
Sbjct: 133 ACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH-VFGANS 191
Query: 148 KS---RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
K + + NL++ LC+ + D A+ F+EM + C PD +Y LM GLC +RR++E
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251
Query: 205 ATHLLYSM------------------------FWRISQ-------KGSGEDIVIYRTLLF 233
A LL M R ++ KG + V Y TL+
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC +GK+ A+ +LEK++ P + + E ++ RG
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKC-VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
+ YS++ L+ EG+ ++ EM KG P++V+Y A + L +D DEA ++
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++E + KG F+P Y+ L+KG G+S A++ K+M Q N +L++GL
Sbjct: 431 LQEMLSKG-FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ-DMRHNVVCCSVLLNGL 488
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ--AKLP 471
C GR EA V ML P V Y+ +I+GLC +G + + EM Q P
Sbjct: 489 CESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 548
Query: 472 DISVWSSLVASVC 484
D+ ++ L ++C
Sbjct: 549 DVVTYNILFNALC 561
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 204/470 (43%), Gaps = 37/470 (7%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y +I L + +I + +M +C ++T + + +++EAV
Sbjct: 194 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 253
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNL 156
L + C+ +FN L+ + K L A L FL+ C EV + N
Sbjct: 254 FLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV-----TYNT 308
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC + D AL + ++M C P++ +Y ++ GL RR + H+L SM
Sbjct: 309 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM---- 364
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++G + IY +L+ L +GK ++A+++ +++ KG K C D E
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD-EK 423
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A+ ++ E L +G +P+ +YS++ + +G + V EM ++ ++V
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS-K 395
L L + G + EAL V + +G P V Y+ ++KGLCD G+ + +M +
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 542
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV------------ 443
+ + TY IL + LCR A +L ML P T N+
Sbjct: 543 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 602
Query: 444 ---------LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ L ++ A+ +EEM+ + P+ S WS ++ C
Sbjct: 603 QDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTC 652
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
KQ+ + I +E+ + N +Y+S+I L + + + +M C+
Sbjct: 350 KQRRAEDGVHILMSMEER--GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 407
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
V+ I R + +EA + + + + ++++L+K K+ + A IL
Sbjct: 408 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKA-ILVW 466
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ +++ + ++L++ LC+ R AL V+ M +G PD +Y ++KGLC+
Sbjct: 467 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 526
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+++ L Y M + + S D+V Y L ALC Q + A+ +L +L +G
Sbjct: 527 GSVDKGLKLFYEM--QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 580
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VLD M+ +G + ++ A K + EA+ TV+ +N +L
Sbjct: 110 QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 169
Query: 377 LCDAGNSAVAVMYLKKM--SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+ G+ + A + + + G N TY +++ LC+ G+ A EM +++
Sbjct: 170 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 229
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P V TY+ L+ GLC + EAV L+EM ++ LP+ ++ L+ ++ N DL+
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN-GDLSRAA 288
Query: 495 KTLEQL 500
K ++ +
Sbjct: 289 KLVDNM 294
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 51/484 (10%)
Query: 7 RLLTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R L P SQ+ K + PL T++ +F++A + Y H+ VY +I L
Sbjct: 54 RSLNPITPSQLCKLLELPLDVPTSMDLFEKAGLQR-GYIHSFHVYYLLIDKLGNVGEFKM 112
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLL 122
+ +++ QMK + C K+S+F +R Y +AG +A L ++ C T +S+N +L
Sbjct: 113 IDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVL 172
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ +V + + A +F + + + ++M C D A + ++M GC
Sbjct: 173 EILVAGNCPKVAPNVFY-DMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGC 231
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ Y +L+ L + R+NEA LL MF G D+ + ++ LC G+I
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM----GCEPDVQTFNDVIHGLCKAGRIH 287
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A ++ +++L + A +ALI+G +
Sbjct: 288 EAAKLHDRMLLRDFTA---------------------------DALIQG---------YL 311
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L G++ E +L ++ P+ V+Y + G +EA +++ + MV
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAG 367
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
F P +NI++ GLC G A+ +L +M K+ G N TY IL+DG C+ G F EA
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEA 426
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
S+V+ M + YN LI LC GK +A+ EM S+ PDI ++SL+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 483 VCCN 486
+C N
Sbjct: 487 LCKN 490
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 208/477 (43%), Gaps = 38/477 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y +I LSE+NR+ E +++++M CE F I +AG+++EA L
Sbjct: 234 NSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLH 293
Query: 104 KN--LSQFNCVNWTQSF-----------------------------NTLLKEMVKESKLE 132
L F Q + NTL+ V + E
Sbjct: 294 DRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L ++ + + N+++D LC+ AL EM +G P+ +Y IL
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C EA+ ++ SM S KG + V Y L+ ALC GKIQDA+Q+ ++
Sbjct: 414 IDGFCKQGHFEEASKVVNSM----SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMS 469
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG K + + C + + +E A L + L+ G I + +Y+ + I
Sbjct: 470 SKGCKPDIYTFNSLIYGLCKN-DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ DK++ EMR +G + Y + AL K G ++ L +IE+ M P++ NI
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ-MFGEEIFPSINSCNI 587
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ C G A+ +L+ M Q G + TY L++GLC+ GRF EA + + +
Sbjct: 588 LINSFCRTGKVNDALQFLRDMI-QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
P TYN LI C G +A L + +S +P+ WS L+ N +D
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSD 703
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 215/452 (47%), Gaps = 38/452 (8%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN++H+ +++MI IL S R+ + + VI +M S + + + + TY
Sbjct: 230 PNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYG------- 282
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV-KSR-----IQ 152
NC + F+ L++ V+ KL C + V KS+ I
Sbjct: 283 -----------NCGSNPLVFDLLVRTYVQARKLREG-------CEAFRVLKSKGLCVSIN 324
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L+ L + DLA ++QE+ G + + +I++ LC ++++ L M
Sbjct: 325 ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 384
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+KG D+V Y TL+ A C QG +++A ++++ + KGLK + I C
Sbjct: 385 ----EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 440
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+ + AK +++E L G P A+Y+ + ++ +++ +++ DEM ++G P LV
Sbjct: 441 TGKYLR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 499
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ A + L K+G +D+AL+ + M P +Y IL+ G C G + A+ +
Sbjct: 500 SFSALIGLLSKNGCLDQALKYFRD-MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M +Q GC + TY +++GLC++ EA + EM R +P T+ LI G G
Sbjct: 559 MLEQ-GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+AV E MI + PD+ +++L+ C
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 649
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 212/467 (45%), Gaps = 18/467 (3%)
Query: 15 SQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGD 74
+Q I+ KS L+ + E K +P+ Y ++I + E E++D M G
Sbjct: 371 NQKIENTKSFLSDM----EEKGVFPDV----VTYNTLINAYCRQGLLEEAFELMDSMSGK 422
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+ + I + G+ A + + + T ++N LL E + + A
Sbjct: 423 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F V + S + L+ +L + D AL F++M G PD Y IL+
Sbjct: 483 ERIF-DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C + ++EA + M ++G D+V Y T+L LC + + +A ++ ++ +
Sbjct: 542 GFCRNGVMSEALKVRDEML----EQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ + DG ++ A +L + R P + +Y+ + ID + +G +E
Sbjct: 598 GVFPDFYTFTTLINGYXKDG-NMNKAVTLFEMMIQRNLKPDVVTYNTL-IDGFCKGSEME 655
Query: 315 G-DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+++ ++M ++ +P+ + Y + G V EA + +EMV+ F T+ N +
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR-LWDEMVEKGFEATIITCNTI 714
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KG C AGN+ A +L M + G V +G TY L++G ++ A ++ +M
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYNV++ G G+ EA + + +MI + PD S ++SL+
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 8/426 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + K V+D+M + + + R + +A +F +
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V SF+ L+ + K L+ A + + R + +L+ C+
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQA-LKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V EM QGC D +Y+ ++ GLC ++ L+EA L F ++++G D
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL----FTEMTERGVFPDFY 604
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ G + A+ + E ++++ LK P + + G ++E L N+
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLK-PDVVTYNTLIDGFCKGSEMEKVNELWND 663
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ R P+ SY + N G + E ++ DEM KGF +++ + + G
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A E + ++KG VP YN L+ G N A + KM G + + TY
Sbjct: 724 AVKADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITY 781
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++++G R GR EA ++ +M+ R P TY LI G + EA +EM+
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 841
Query: 467 QAKLPD 472
+ +PD
Sbjct: 842 RGFVPD 847
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 162/396 (40%), Gaps = 67/396 (16%)
Query: 110 NCVNWT---QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC N+ QSF+ ++ +V+ +L A + LR V SR++ + L+ C
Sbjct: 228 NCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGV-SRVEIVESLVLTYGNCGS 286
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ L + +L++ R+L E F + KG I
Sbjct: 287 NPLV------------------FDLLVRTYVQARKLREGCE----AFRVLKSKGLCVSIN 324
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+LL L G + A +I ++++R G++ + + C + + IE KS
Sbjct: 325 ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKN-QKIENTKSF--- 380
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +M KG +P +V Y + A + G+
Sbjct: 381 --------------------------------LSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++EA E+++ KG P V YN ++ GLC G A L +M K +G + TY
Sbjct: 409 LEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATY 466
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+ CR+ ++A R+ +EM + P + +++ LI L G +A+ + +M +
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 467 QAKLPDISVWSSLVASVCCN---TADLNVCRKTLEQ 499
PD +++ L+ C N + L V + LEQ
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 562
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ EG + +++KG S+ + L L K G VD A E+ +E + G V V
Sbjct: 303 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTL 361
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI++ LC +L M ++ G + TY L++ CR G EA +++ M
Sbjct: 362 NIMINALCKNQKIENTKSFLSDMEEK-GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ PCV TYN +I GLC GK A L+EM+ PD + ++ L+ CC ++
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNM 479
Query: 491 NVCRKTLEQLSS 502
+ +++ S
Sbjct: 480 MDAERIFDEMPS 491
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 222/482 (46%), Gaps = 15/482 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + K +++F+E E+ + + Y ++I L ++ + E +
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVER--GHHPDVVTYNTLIDSLCKAGDLEEAR 271
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC--VNWTQSFNTLLK 123
+ M SC ++ I + G+++EA L + +++ +C + ++N+ L
Sbjct: 272 RLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 331
Query: 124 EMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K+S EA ++ V + + L+D LC+C + D A VF +M G
Sbjct: 332 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY 391
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y+ L+ GLC ++ A ++ SM KG D++ Y L+ A C ++
Sbjct: 392 VPNVITYNALVNGLCKADKMERAHAMIESMV----DKGVTPDVITYSVLVDAFCKASRVD 447
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A+++L + +G + I C E + + AL G +P +Y +
Sbjct: 448 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTL 507
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L+ GR + + +LD M P + + L K G V AL+V M++
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNR-MLELE 562
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP +NIL+ G C AGN A ++M + + T+G L+DGLC+ G+ A
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAA 621
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+L+ M P V TYN L+ GLC G+ EA +LEEM+S +PD + SLV +
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681
Query: 483 VC 484
+C
Sbjct: 682 LC 683
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 203/443 (45%), Gaps = 15/443 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + R + + ++D M + F I ++ G ++ A+ ++ +
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRM 558
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V +FN L+ K E A LF ++ + + L+D LC+ +
Sbjct: 559 LELELVPDKVTFNILIAGACKAGNFEQASALF-EEMVAKNLQPDVMTFGALIDGLCKAGQ 617
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + M G P+ +Y+ L+ GLC R+ EA L M G D +
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV----SSGCVPDSI 673
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L++ALC + DA+Q++ ++ G P + + I + E A +++ E
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWD-PDTVTYNILVDGLWKSGQTEQAITVLEE 732
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK---GFWPSLVMYEAKLAALFK 343
+ +G P + +Y+ + L G + E ++ +M ++ P++V Y + L K
Sbjct: 733 MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK 792
Query: 344 DGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVA 401
G +DEA E+I+E M K V P + YN L GLC A A ++ + +
Sbjct: 793 VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSP 852
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ T+ L+DGLC+ G+ EA V ++M+ Y P V TYNVL+ GLC K A +
Sbjct: 853 DTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMI 912
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E M+ + PD+ +S LV + C
Sbjct: 913 ESMVDKGVTPDVITYSVLVDAFC 935
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 207/473 (43%), Gaps = 42/473 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L +S RI E + +++M C + + + RA + ++A+ L L
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
F T ++N L+ + K + E A I L G + + N L+D LC+
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQA-ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757
Query: 167 SDLALHVFQEMDFQ---GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A + +M + C P+ +Y +L+ GLC R++EA L+ M +
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCD--VLP 815
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHR--ID-LCPCNDGEDIEG 279
+I+ Y + L LC Q + +A +++ + L+ +P + ID LC C ++
Sbjct: 816 NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE--- 872
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A ++ ++ + G +P++ +Y+ + L ++ +++ M KG P ++ Y +
Sbjct: 873 ACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
A K VDEALE++ +G P V +N ++ GLC + S A M+ + G
Sbjct: 933 AFCKASHVDEALELLHGMASRGC-TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGL 991
Query: 400 VANGETYGILVDGLCRDG----------------------------RFLEASRVLEEMLI 431
+ TY L+DGL R G + + SR L ML
Sbjct: 992 APDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLE 1051
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T+N+LI G C G +A EEM+++ PD+ + +L+ +C
Sbjct: 1052 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 1104
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 198/433 (45%), Gaps = 25/433 (5%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
NR+ E++ V D++ F I +AG +A +LF+ + N +F
Sbjct: 556 NRMLELELVPDKV----------TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 605
Query: 119 NTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
L+ + K ++EAA IL L G V + + N L+ LC+ R + A +EM
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLG--VPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
GC PD +Y L+ LC R ++A L+ + G D V Y L+ L
Sbjct: 664 VSSGCVPDSITYGSLVYALCRASRTDDALQLVS----ELKSFGWDPDTVTYNILVDGLWK 719
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPS 295
G+ + A+ +LE+++ KG + + LC D E+ ++ + R +P+
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKG--FWPSLVMYEAKLAALFKDGMVDEALEV 353
+ +YS + L GRI E +++ EM K P+++ Y + L L K M+ EA E+
Sbjct: 780 VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839
Query: 354 IEEEMVKGTF--VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ + G+ P ++ L+ GLC G + A M G V N TY +L++
Sbjct: 840 MRS-LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG-GYVPNVVTYNVLMN 897
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GLC+ + A ++E M+ + P V TY+VL+ C EA+ L M S+ P
Sbjct: 898 GLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP 957
Query: 472 DISVWSSLVASVC 484
++ ++S++ +C
Sbjct: 958 NVVTFNSIIDGLC 970
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/549 (20%), Positives = 218/549 (39%), Gaps = 83/549 (15%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P+ + I+ + F + P ++H + + +L +S + ++
Sbjct: 75 LHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF 134
Query: 69 DQMKGDSCECKDSVFATAIR-TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
C ++T +R TY G + + F+ + +N +L+ + +
Sbjct: 135 RSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSS--SRSVADYNIVLQSLCR 192
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ A +F V I + N +++ LC+ + +F+E+ +G +PD
Sbjct: 193 AGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVV 252
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ L+ LC L EA L M S + ++V Y L+ LC G+I +A ++
Sbjct: 253 TYNTLIDSLCKAGDLEEARRLHGDM----SSRSCVPNVVTYSVLINGLCKVGRIDEAREL 308
Query: 248 LEKILRKG-----------------------------LKAPKSRRHRID----------- 267
++++ RK +++ + R+
Sbjct: 309 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 368
Query: 268 -LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
LC C I+ A S+ ++ + G +P++ +Y+A+ L ++ +++ M KG
Sbjct: 369 GLCKCG---QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P ++ Y + A K VDEALE++ +G P V +N ++ GLC + S A
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC-TPNVVTFNSIIDGLCKSDRSGEA 484
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE------------------- 427
M+ + G V + TY L+DGL R GR +A +L+
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSK 544
Query: 428 ------------EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
ML P T+N+LI G C G +A EEM+++ PD+
Sbjct: 545 LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604
Query: 476 WSSLVASVC 484
+ +L+ +C
Sbjct: 605 FGALIDGLC 613
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 231/497 (46%), Gaps = 50/497 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++F+E + PN Y S+I L ++ ++ + E++D+M+ +V
Sbjct: 17 AVQLFREER-CVPNEF----TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGV 71
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR +AG+ +A+ FK ++ C +FN L+ +VK ++E A +F +
Sbjct: 72 IRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + +++ LC+ + D A+ + M+ GC P+ +Y +L++GLC R ++
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M +++G D+++Y TLL LC ++ +A+++++ ++R G + +
Sbjct: 192 TLLQEM----TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C + ++ A LI RG P + +Y+ + L + R+ + +L +M
Sbjct: 248 MELFCRS-KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306
Query: 327 FWPSLVMYEAKLAALFKDGMVD-----EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
P ++ Y + L KD VD EA I E M + P Y ++++GLC A
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366
Query: 382 NSAVAVMYLKKM------------SKQVG----------------------CVANGETYG 407
S A+ L++M S +G C N Y
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DGL + G +A RV E+++ S+ P V TYN ++ GLC +G+ EAV +E MI +
Sbjct: 427 ALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Query: 468 AKLPDISVWSSLVASVC 484
PD + + +L+ +C
Sbjct: 486 ECFPDGASYGALIRGLC 502
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 198/457 (43%), Gaps = 87/457 (19%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
A+ RAGQ +AV LF+ + CV ++ +L+ + K KL+ A+ L L
Sbjct: 4 ALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYEL-LDEMRDR 59
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + N ++ LC+ R AL F+ + C PD +++IL+ L R+ EA
Sbjct: 60 GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ SM + ++V Y T++ LC GK+ A+++L+
Sbjct: 120 FQIFESMH---TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD---------------- 160
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L+NE G P++ +YS + L GR +G +L EM +
Sbjct: 161 -----------------LMNET---GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P ++MY L L K +DEALE++ + M++ PTV YN L++ C +
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--------------- 430
A ++ MS++ GC + Y ++ GLCRD R +A +L++M+
Sbjct: 260 AFRLIQVMSER-GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Query: 431 --------IRSYW------------------PCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ + W P TY V+I GLC K +A+ L M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I +PD+S +S ++ S+ C + DL+ K +S
Sbjct: 379 IDSEVVPDLSSFSMVIGSL-CKSHDLDAAYKIFGMMS 414
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 199/486 (40%), Gaps = 83/486 (17%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K A +IF E+ N Y ++I L + ++
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++D M C ++ + +AG+ ++ +L + +++ +NTLL +
Sbjct: 157 ELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 126 VKESKLEAA----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K +L+ A ++ CY + + N LM++ C+ ++ D A + Q M +G
Sbjct: 217 CKSRRLDEALELVQLMIRSGCY-----PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG-- 239
C PD +Y+ ++ GLC D RL++A LL M D++ Y T++ LC
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP----DVITYSTIIDGLCKDWRV 327
Query: 240 ----KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE---DIEG---------AKSL 283
K++ A +ILE + + G CP N G IEG A +L
Sbjct: 328 DADWKLEAACEILEMMKQTG-------------CPPNAGTYAVVIEGLCRARKSQQALAL 374
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + +P L+S+S + L + K+ M + P+ V Y A + L K
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G VD+A+ V E ++ +F P V YN +L GLC G AV ++ M + C +G
Sbjct: 435 GGEVDKAVRVFE--LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK-ECFPDG 491
Query: 404 ETYG-----------------------------------ILVDGLCRDGRFLEASRVLEE 428
+YG +LV+ LC+ R +A V +
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Query: 429 MLIRSY 434
++ Y
Sbjct: 552 LIEAGY 557
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N L L AG AV ++ ++ CV N TYG L+ GLC+ G+ +A +L+EM
Sbjct: 2 NCALNLLVRAGQHGQAV----QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R P V +N +IRGLC G+ +A+ + + + PDI ++ LV ++
Sbjct: 58 DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 216/443 (48%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + +TE ++++M C + F +R G++ EA L +
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
C+ ++ LL+ + + + + A + R+ LN+++ V+ C
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGC 321
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y ILM GLC R++ A LL M +KG
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM----EKKGF 377
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y +L + C G D +LE++ KGL + + C DG ++ A
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR-MDEAM 436
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
LI E +G P + SY+ + L N ++ E + + + + +G + + Y + AL
Sbjct: 437 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+DG +A+ + +E ++ G + V YN L+K +C GN +++ L++M+++ G
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVS-YNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKP 554
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y IL+ LC++ R +A + ++ML + P + TYN LI GLC +G + A+ L
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ PDI ++ L++ C
Sbjct: 615 EKLHNENVHPDIITYNILISWHC 637
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 199/407 (48%), Gaps = 20/407 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--- 137
F A R R G+ NEA++L + +++ CV + T++ + + + EAA +L
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L C + + + + ++ +C R A + M +GC P +Y L++GLC
Sbjct: 237 LLMGC-----AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 291
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R+ +EA +M R+ + ++V++ T++ +GK+ +A ++ E + KG +
Sbjct: 292 RVRQADEAR----AMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 343
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + I + I A L+ E +G P++ +Y+ + G +
Sbjct: 344 -PDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L+EM KG + Y + AL KDG +DEA+ +I+E +G P + YN ++ L
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHL 461
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C+ A + + ++ G VANG TY ++ L RDGR+ +A R+ +EM++
Sbjct: 462 CNNEQMEEAEHMFENLLEE-GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +YN LI+ +C G +++ LEEM + P+ ++ L++ +C
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 567
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 171/345 (49%), Gaps = 16/345 (4%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE-SYHILMKGLCNDRRLN 203
+ V+ +S N+++ VL + AL +++ M + P ++ + + LC R N
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAN 192
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M ++ G D V+Y+T++ ALCDQG + +A +L ++L G A +
Sbjct: 193 EALALLRGM----ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ C G E A+ L++ + +G +P + +Y + L R+ + D+ +
Sbjct: 249 DDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFL---LQGLCRVRQADEARAML- 303
Query: 324 TKGFWPSL--VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
G P L V++ + +G + EA E+ E +KG P Y+IL+ GLC G
Sbjct: 304 --GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC-QPDAHTYSILMHGLCKLG 360
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ AV L++M K+ G N TY I++ C++G + + +LEEM + + Y
Sbjct: 361 RISSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N +I LC G+ EA+ ++EM SQ PDI +++++ +C N
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y MI L + R+ E +I +M+ C + T I Q+ EA +F
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+NL + V ++NT++ ++++ + + A + L C + S N L+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC-----SLDVVSYNGLIK 529
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+C+ D +L + +EM +G P+ SY+IL+ LC +RR+ +A L M +
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML----NQ 585
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
G DIV Y TL+ LC G + A+ +LEK+
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 207/454 (45%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + Y SMIG+L + NR+ E E+ +QM+ + + T
Sbjct: 287 AWKFFHEIKSH--GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM 344
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AG+ +EA SL + C+ ++N +L + K+ +L A F +
Sbjct: 345 IMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE--MKKD 402
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+L+D+LC+ + A V M G +P+ + +I++ LC ++L+EA
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+F ++ K D V + +L+ L QG++ DA ++ E++L
Sbjct: 463 ----SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML-------------- 504
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
D + I P+ Y+++ + GR +G K+ EM +G
Sbjct: 505 ------DSDKI----------------PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + A + +FK G + + EE +G F+P V Y+IL+ GL AG +
Sbjct: 543 CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG-FIPDVMSYSILIHGLVKAGFARET 601
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M +Q GCV + Y +DG C+ G+ +A ++LEEM + P V TY +I
Sbjct: 602 YELFYAMKEQ-GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVID 660
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S ++ ++SSL+
Sbjct: 661 GLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 201/465 (43%), Gaps = 24/465 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P L T L ++ K A K+ KE +PN MI L ++ ++ E
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM----TVNIMIDRLCKAKKLDE 460
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + M C + F + I + G++++A L++ + + + + +L+K
Sbjct: 461 ACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIK 520
Query: 124 EMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
K + E H +F R C ++ LN MD + + + +F+E+
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGC-----SPDLRLLNAYMDCVFKAGETGKGRALFEEIKS 575
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD SY IL+ GL E Y +F+ + ++G D Y T + C G
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGFARET----YELFYAMKEQGCVLDTHAYNTFIDGFCKSG 631
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
K+ A Q+LE++ KG + P + + + ++ A L EA G ++ Y
Sbjct: 632 KVNKAYQLLEEMKTKG-RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIY 690
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE-EM 358
S++ GRI E +++E+ KG P++ + L AL K ++EAL + +
Sbjct: 691 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKN 750
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
+KGT P Y+IL+ GLC A ++ ++M KQ G N TY ++ GL + G
Sbjct: 751 LKGT--PNHITYSILINGLCRVRKFNKAFVFWQEMQKQ-GLKPNTITYTTMIAGLAKAGN 807
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
EAS + E P +YN +I GL + EA EE
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 8/338 (2%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ + + L+ L + SD+ L +F +M G + +++ + RL+
Sbjct: 192 FKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDA 251
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A LL M DIV+Y + GK+ A + +I GL P +
Sbjct: 252 ALSLLDEM----KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGL-LPDDVTY 306
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ G ++ A + + +P +Y+ M + + G+ E +L+ +
Sbjct: 307 TSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKA 366
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G PS++ Y L L K G + EAL EE +K P + YN+L+ LC AG
Sbjct: 367 RGCIPSVIAYNCILTCLGKKGRLGEALRTFEE--MKKDAAPNLSTYNVLIDMLCKAGEVE 424
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M K+ G N T I++D LC+ + EA + E M + P T+ L
Sbjct: 425 AAFKVRDAM-KEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSL 483
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
I GL G+ +A E+M+ K+P+ V++SL+ S
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKS 521
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 142/360 (39%), Gaps = 45/360 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + R + ++ +M C + + +AG+ + +LF
Sbjct: 511 NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALF 570
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI---QSLNLLMDV 160
+ + + S++ L+ +VK + LF Y + + + + N +D
Sbjct: 571 EEIKSRGFIPDVMSYSILIHGLVKAGFARETYELF----YAMKEQGCVLDTHAYNTFIDG 626
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ + + A + +EM +G P +Y ++ GL RL+EA Y +F G
Sbjct: 627 FCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSNG 682
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------KSRRHRIDL 268
++VIY +L+ G+I +A I+E++++KGL K+ L
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742
Query: 269 CPCNDGEDIEGAKSLINEALIRGGI----------------------PSLASYSAMAIDL 306
+ ++++G + I +++ G+ P+ +Y+ M L
Sbjct: 743 VCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGL 802
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G I E + + + G P Y A + L EA ++ EE +KG + T
Sbjct: 803 AKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHT 862
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 220/442 (49%), Gaps = 16/442 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + +++ E V+D+M C+ + T + + R G L+ AV L + ++
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++N ++ + KL++A LF + + + ++D L + +
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + + M +GC P+ +Y L+ GLC +L+EAT LL R+++ G +IV
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL----QRMTRSGCSPNIVT 292
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCNDGEDIEGAKSLI 284
Y T++ C G+I +A +LE+++ G + P + + L C C ED G L+
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ-PNVVTYTVLLDAFCKCGKAEDAIG---LV 348
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ +G +P+L +Y+++ +D++ + VE ++L M KG P++V Y +A L K
Sbjct: 349 EVMVEKGYVPNLFTYNSL-LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V E + ++ E+M+ VP + +N ++ +C +A L + ++ GC N
Sbjct: 408 ATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA-YELFNLIQESGCTPNL 465
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY LV GLC+ RF +A +L EM + P + TYN +I GLC + A
Sbjct: 466 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525
Query: 463 EMISQAKLPDISVWSSLVASVC 484
+M+S PD +S +++S+C
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLC 547
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 208/438 (47%), Gaps = 43/438 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
V + +R AGQ ++AV F+ +S+ C + ++NT++ + K +L+ A I L
Sbjct: 12 VHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDA-IRLLEE 69
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ S N ++ C+ R + AL + ++M +GC PD SY ++ GLC +
Sbjct: 70 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ 129
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA ++ M Q+G +++ Y TL+ C G + A++++ K+ +G +
Sbjct: 130 VDEACRVMDKMI----QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 185
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I C+ G ++ A L E G P + +YS + L G++ + ++++
Sbjct: 186 TYNNIMHGLCS-GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE------------------------- 355
M +KG P++V Y + L L K G +DEA +++
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 356 ---------EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
EEMV G P V Y +LL C G + A+ ++ M ++ G V N TY
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK-GYVPNLFTY 363
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+D C+ A ++L M+ + P V +YN +I GLC K +E V+ LE+M+S
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Query: 467 QAKLPDISVWSSLVASVC 484
+PDI +++++ ++C
Sbjct: 424 NNCVPDIVTFNTIIDAMC 441
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 221/465 (47%), Gaps = 20/465 (4%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+AL++FKE +E + + Y++++ L +S ++ + +++ M C +++
Sbjct: 202 SALQLFKEMEES-GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ +AG+L+EA +L + +++ C ++NT++ K +++ A+ L G
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + +L+D C+C +++ A+ + + M +G P+ +Y+ L+ C + A
Sbjct: 321 -CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL SM QKG ++V Y T++ LC K+ + + +LE++L +
Sbjct: 380 CQLLSSMI----QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RT 324
I C ++ A L N G P+L +Y+++ L R + + +L EM R
Sbjct: 436 IIDAMCKTYR-VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----D 379
+G P ++ Y + L K VD A ++ + + G P Y+I++ LC D
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG-LAPDDVTYSIVISSLCKWRFMD 553
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
N+ + +M LK G TYG L+DG C+ G +A +L+ +L + +P V
Sbjct: 554 EANNVLELM-LKN-----GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 607
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+++ I L G+ +A LE M+ +PD +++L+ C
Sbjct: 608 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 36/303 (11%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGK----------------------------------I 241
+++KG +++++L LCD G+ +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA+++LE+++ G AP + L +E A L+ + ++RG P + SY+
Sbjct: 61 DDAIRLLEEMVDNGF-APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L ++ E +V+D+M +G P+++ Y + + G +D A+E++ + +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+ P YN ++ GLC A+ K+M + C + TY +VD L + G+ +
Sbjct: 180 -YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A R++E M+ + P V TY+ L+ GLC GK EA L+ M P+I +++++
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298
Query: 482 SVC 484
C
Sbjct: 299 GHC 301
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 227/480 (47%), Gaps = 14/480 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + +++ Q AL+ F A ++ YRH+ VY +M+ ILS++ K
Sbjct: 97 RSLKPRQVCAVLQLQTDERVALRFFYWADRQW-RYRHDPIVYYAMLEILSKTKLCQGAKR 155
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ M E + F + +Y+RAG+L A+ + + + NT + +V
Sbjct: 156 VLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLV 215
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
++L+ A + FL E++ + + N L+ C R + A+ + EM F+GC PD+
Sbjct: 216 MGNRLDKA-VRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDK 274
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++R+ E L+ M + D V Y T + L G +A++
Sbjct: 275 ISYYTVMGFLCKEKRIKEVRLLMEKM---LKDSNLLPDQVTYNTFVHMLSKHGHGDEALE 331
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L + + + K I C +G ++ AK ++NE +G IP + +Y+++ L
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGR-MDKAKEIVNEMFSKGCIPDVVTYTSVINGL 390
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEEMVKGTF 363
E ++ + K+L +M G P+ V Y A L L K+G EA E++ EE+ +
Sbjct: 391 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW----W 446
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P Y++L+ G G S+ A +++M K+ G +L+ LC++ + EA
Sbjct: 447 IPNAITYSVLMHGFRREGKSSEACDLVREMIKK-GFFPTPVEINLLIQSLCQEEKVDEAK 505
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R +E+ L V + +I G C A+ L++M K PD+ +++++ ++
Sbjct: 506 RFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 197/467 (42%), Gaps = 42/467 (8%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+ I +L NR+ + +++M+ E + I+ Y +L +A+ L +
Sbjct: 209 TAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFK 268
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C S+ T++ + KE +++ +L + + + N + +L + D
Sbjct: 269 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 328
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL +E + + D+ Y ++ C + R+++A ++ MF KG D+V Y
Sbjct: 329 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF----SKGCIPDVVTYT 384
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+++ LC + K+ A ++L ++ + G K + C +G +E A+ ++N +
Sbjct: 385 SVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLE-AREMMNMSEE 443
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
IP+ +YS + EG+ E ++ EM KGF+P+ V + +L ++ VDE
Sbjct: 444 DWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSK--------- 395
A +E+ + G V V + ++ G C +A S + MYL
Sbjct: 504 AKRFMEQCLNNGCAVNVVN-FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTII 562
Query: 396 --------------------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+VG + TY ++ CR GR + ++LE+ML R
Sbjct: 563 DALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ-- 620
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
C YN +I LCS G +A L +++ A D + L+ S
Sbjct: 621 ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIES 667
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 198/459 (43%), Gaps = 46/459 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L + RI E++ ++++M DS D V + T + ++ G +EA+ +
Sbjct: 277 YYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 336
Query: 107 SQ----FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + V ++ ++ +E + E + +F + C + + +++ LC
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI-----PDVVTYTSVINGLC 391
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------- 209
Q R+ D A + ++M GC P+ SY L+ GLC + EA ++
Sbjct: 392 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAI 451
Query: 210 -YSM----FWRISQKGSGEDIV-------IYRT------LLFALCDQGKIQDAMQILEKI 251
YS+ F R + D+V + T L+ +LC + K+ +A + +E+
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC 511
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L G + C +D+E A SL+++ + P + +Y+ + L +GR
Sbjct: 512 LNNGCAVNVVNFTTVIHGFCQK-DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGR 570
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E K+ +M G P+ V Y + + G V++ L+++E+ + + YN
Sbjct: 571 IEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE---CRTAYN 627
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+++ LC GN A L K+ + + + T +L++ G L + V M
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKI-DANTCHMLIESYLSKGIPLMSYNVACRMFN 686
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
R+ P ++ + + L GK EA + + + ++
Sbjct: 687 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRI 725
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND-------GEDIEGAKSLINEALIRG 291
GK+++AM++L + + G++ DL CN G ++ A + I
Sbjct: 183 GKLRNAMRVLTMMQKAGIEP--------DLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +Y+ + + R+ + +++ EM KG P + Y + L K+ + E
Sbjct: 235 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 294
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++E+ + +P YN + L G+ A+ +L++ ++ V + Y +V
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVH 353
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
CR+GR +A ++ EM + P V TY +I GLC K +A L +M P
Sbjct: 354 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 413
Query: 472 DISVWSSLVASVCCNTADL 490
+ +++L+ +C N L
Sbjct: 414 NTVSYTALLNGLCKNGNSL 432
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 231/497 (46%), Gaps = 50/497 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++F+E + PN Y S+I L ++ ++ + E++D+M+ +V
Sbjct: 17 AVQLFREER-CVPNEF----TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGV 71
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ +AG+ +A+ FK ++ C +FN L+ +VK ++E A +F +
Sbjct: 72 IKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + +++ LC+ + D A+ + M+ GC P+ +Y +L++GLC R ++
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M +++G D+++Y TLL LC ++ +A+++++ ++R G + +
Sbjct: 192 TLLQEM----TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C + ++ A LI RG P + +Y+ + L + R+ + +L +M
Sbjct: 248 MELFCRS-KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306
Query: 327 FWPSLVMYEAKLAALFKDGMVD-----EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
P ++ Y + L KD VD EA I E M + P Y ++++GLC A
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366
Query: 382 NSAVAVMYLKKM------------SKQVG----------------------CVANGETYG 407
S A+ L++M S +G C N Y
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DGL + G +A RV E+++ S+ P V TYN ++ GLC +G+ EAV +E MI +
Sbjct: 427 ALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Query: 468 AKLPDISVWSSLVASVC 484
PD + + +L+ +C
Sbjct: 486 ECFPDGASYGALIRGLC 502
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 198/457 (43%), Gaps = 87/457 (19%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
A+ RAGQ +AV LF+ + CV ++ +L+ + K KL+ A+ L L
Sbjct: 4 ALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYEL-LDEMRDR 59
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + N ++ LC+ R AL F+ + C PD +++IL+ L R+ EA
Sbjct: 60 GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ SM + ++V Y T++ LC GK+ A+++L+
Sbjct: 120 FQIFESMH---TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD---------------- 160
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L+NE G P++ +YS + L GR +G +L EM +
Sbjct: 161 -----------------LMNET---GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P ++MY L L K +DEALE++ + M++ PTV YN L++ C +
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--------------- 430
A ++ MS++ GC + Y ++ GLCRD R +A +L++M+
Sbjct: 260 AFRLIQVMSER-GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Query: 431 --------IRSYW------------------PCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ + W P TY V+I GLC K +A+ L M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I +PD+S +S ++ S+ C + DL+ K +S
Sbjct: 379 IDSEVVPDLSSFSMVIGSL-CKSHDLDAAYKIFGMMS 414
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 199/486 (40%), Gaps = 83/486 (17%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K A +IF E+ N Y ++I L + ++
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAI 156
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++D M C ++ + +AG+ ++ +L + +++ +NTLL +
Sbjct: 157 ELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 126 VKESKLEAA----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K +L+ A ++ CY + + N LM++ C+ ++ D A + Q M +G
Sbjct: 217 CKSRRLDEALELVQLMIRSGCY-----PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG-- 239
C PD +Y+ ++ GLC D RL++A LL M D++ Y T++ LC
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP----DVITYSTIIDGLCKDWRV 327
Query: 240 ----KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE---DIEG---------AKSL 283
K++ A +ILE + + G CP N G IEG A +L
Sbjct: 328 DADWKLEAACEILEMMKQTG-------------CPPNAGTYAVVIEGLCRARKSQQALAL 374
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + +P L+S+S + L + K+ M + P+ V Y A + L K
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G VD+A+ V E ++ +F P V YN +L GLC G AV ++ M + C +G
Sbjct: 435 GGEVDKAVRVFE--LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK-ECFPDG 491
Query: 404 ETYG-----------------------------------ILVDGLCRDGRFLEASRVLEE 428
+YG +LV+ LC+ R +A V +
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Query: 429 MLIRSY 434
++ Y
Sbjct: 552 LIEAGY 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N L L AG AV ++ ++ CV N TYG L+ GLC+ G+ +A +L+EM
Sbjct: 2 NCALNLLVRAGQHGQAV----QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R P V +N +I+GLC G+ +A+ + + + PDI ++ LV ++
Sbjct: 58 DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 215/443 (48%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + +TE ++++M C + F +R G++ EA L +
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
C+ ++ LL+ + + + + A + R+ LN+++ V+ C
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGC 321
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y ILM GLC R+ A LL M +KG
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM----EKKGF 377
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y +L + C G D +LE++ KGL + + C DG ++ A
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR-MDEAM 436
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
LI E +G P + SY+ + L N ++ E + + + + +G + + Y + AL
Sbjct: 437 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+DG +A+ + +E ++ G + V YN L+K +C GN +++ L++M+++ G
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVS-YNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKP 554
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y IL+ LC++ R +A + ++ML + P + TYN LI GLC +G + A+ L
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ PDI ++ L++ C
Sbjct: 615 EKLHNENVHPDIITYNILISWHC 637
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 199/407 (48%), Gaps = 20/407 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--- 137
F A R R G+ +EA++L + +++ CV + T++ + + + EAA +L
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L C + + + + ++ +C R A + M +GC P +Y L++GLC
Sbjct: 237 LLMGC-----AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 291
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R+ +EA +M R+ + ++V++ T++ +GK+ +A ++ E + KG +
Sbjct: 292 RVRQADEAR----AMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 343
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + I + I A L+ E +G P++ +Y+ + G +
Sbjct: 344 -PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L+EM KG + Y + AL KDG +DEA+ +I+E +G P + YN ++ L
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHL 461
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C+ A + + ++ G VANG TY ++ L RDGR+ +A R+ +EM++
Sbjct: 462 CNNEQMEEAEHMFENLLEE-GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +YN LI+ +C G +++ LEEM + P+ ++ L++ +C
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 567
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 169/343 (49%), Gaps = 16/343 (4%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE-SYHILMKGLCNDRRLNEA 205
V+ +S N+++ VL + AL +++ M + P ++ + + LC R +EA
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEA 194
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M ++ G D V+Y+T++ ALCDQG + +A +L ++L G A +
Sbjct: 195 LALLRGM----ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G E A+ L++ + +G +P + +Y + L R+ + D+ +
Sbjct: 251 VVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFL---LQGLCRVRQADEARAML--- 303
Query: 326 GFWPSL--VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P L V++ + +G + EA E+ E +KG P Y+IL+ GLC G
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC-QPDAHTYSILMHGLCKLGRI 362
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
AV L++M K+ G N TY I++ C++G + + +LEEM + + YN
Sbjct: 363 GSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+I LC G+ EA+ ++EM SQ PDI +++++ +C N
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y MI L + R+ E +I +M+ C + T I Q+ EA +F
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+NL + V ++NT++ ++++ + + A + L C + S N L+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC-----SLDVVSYNGLIK 529
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+C+ D +L + +EM +G P+ SY+IL+ LC +RR+ +A L M +
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML----NQ 585
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
G DIV Y TL+ LC G + A+ +LEK+
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 206/459 (44%), Gaps = 13/459 (2%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A+ + H+G Y S+I L +N + +E+ M C +
Sbjct: 26 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + G L EA L K + + V ++NT++ + K S++E A +LF
Sbjct: 86 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+R +S N ++ LCQ + D A VF EM+ + PD SY IL+ GL +LNEA
Sbjct: 146 CTPNR-RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y +F R+ G V Y ++ +C + +A+++ + + KG + + +
Sbjct: 205 ----YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A L+ G +P + +YS + L + R+ + +L++M +
Sbjct: 261 LIDAHCKRGK-LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V + L K G + EA EV++ MV P V YN L+ G C AG +
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDA-MVSSGQSPDVVTYNTLVHGHCRAGQTER 378
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A L M + G N TY LV GLC+ R EA V +M P + TY LI
Sbjct: 379 ARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G CS G+ + EM+ PD V+ +L A +C
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 207/446 (46%), Gaps = 16/446 (3%)
Query: 27 ALKIFKEAKEK--YPNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
AL +F E + PN R HN ++I L + ++I + +V +M+ +
Sbjct: 134 ALLLFNEMERLGCTPNRRSHN-----TIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
I A+AG+LNEA LF+ + ++N ++ M L+ A LF +S
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF-KSMR 247
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + N+L+D C+ + D A + + M G PD +Y L+ GLC+ R++
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A HLL M R + +V TL+ LC G+I++A ++L+ ++ G
Sbjct: 308 DARHLLEDMVKRQCKP----TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C G+ E A+ L+++ + RG P++ +Y+A+ L R+ E V +M+
Sbjct: 364 NTLVHGHCRAGQ-TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+ G P+L Y A + G VD L++ E MV P VY L LC +G S
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE-MVCAGISPDHVVYGTLAAELCKSGRS 481
Query: 384 AVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A A+ L++ + + A G E Y VDGL G+ A + +M+ P E
Sbjct: 482 ARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA 541
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GLC G+ EA LEE++ A
Sbjct: 542 SLVAGLCKSGQGGEARAVLEEIMDLA 567
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 169/368 (45%), Gaps = 8/368 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ L+ + K KL A LF + + S + +L+ LC D A +F +
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHG-LCMANSFDDARELFAD 70
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +GC P +Y++++ C L EA L+ M + G D+V Y T++ LC
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI----EDGHVPDVVTYNTVMDGLC 126
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
++++A+ + ++ R G P R H + I+ A + +E + P
Sbjct: 127 KSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY + L G++ E K+ M G PS V Y + + +DEALE+ +
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
KG P+ +NIL+ C G A LK+M+ G V + TY L+ GLC
Sbjct: 246 MRSKGCR-PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD-GHVPDVVTYSTLISGLCSI 303
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R +A +LE+M+ R P V T N LI GLC G+ EA L+ M+S + PD+ +
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 477 SSLVASVC 484
++LV C
Sbjct: 364 NTLVHGHC 371
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 191/437 (43%), Gaps = 43/437 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L+++ ++ + + + ++ + + I A ++A LF +++
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C ++N ++ K LE A L + V + + N +MD LC+ R
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPD-VVTYNTVMDGLCKSSRV 131
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ AL +F EM+ GC P+R S++ ++ GLC ++++A + + M K D
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM----EAKDIPPDSWS 187
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ L GK+ +A ++ +++L G+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGI------------------------------- 216
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
PS +Y+ + + + E ++ MR+KG PS + + A K G +
Sbjct: 217 -----TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA +++ M VP V Y+ L+ GLC A L+ M K+ C T
Sbjct: 272 DEAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ-CKPTVVTQN 329
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ GLC+ GR EA VL+ M+ P V TYN L+ G C G+ A L +M+++
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Query: 468 AKLPDISVWSSLVASVC 484
P++ +++LV+ +C
Sbjct: 390 GLAPNVVTYTALVSGLC 406
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 207/456 (45%), Gaps = 11/456 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L +S+R+ E + ++M+ C T I + ++++A +F +
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + S+ L+ + K KL A+ LF R S + + N+++ +C
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAV-TYNVVIHGMCLAYT 235
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL +F+ M +GC P R +++IL+ C +L+EA LL R++ G D+V
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK----RMTDDGHVPDVV 291
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC ++ DA +LE ++++ K ++ + C G I+ A+ +++
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAREVLDA 350
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P + +Y+ + G+ ++L +M +G P++V Y A ++ L K
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA V + G P + Y L+ G C AG + +M G + Y
Sbjct: 411 LPEACGVFAQMKSSGC-APNLFTYTALILGFCSAGQVDGGLKLFGEMV-CAGISPDHVVY 468
Query: 407 GILVDGLCRDGRFLEASRVLEEML--IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
G L LC+ GR A +L E +RS E Y + GL GK A+ ++ +M
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 528
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ +LP +SLVA + C + R LE++
Sbjct: 529 VRGGQLPAPERCASLVAGL-CKSGQGGEARAVLEEI 563
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 155/344 (45%), Gaps = 44/344 (12%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ + PD SY IL+ GL +LN+A +L F ++ G V Y +L+ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNL----FQKLLHSGVTPSTVAYTSLIHGLC 56
Query: 237 DQGKIQDAMQILEKILRKGL-KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
DA ++ + R+G +P + ID C G +E A LI + + G +P
Sbjct: 57 MANSFDDARELFADMNRRGCPPSPVTYNVMID-ASCKRGM-LEEACDLIKKMIEDGHVPD 114
Query: 296 LASYSAM------------AIDLYNE-----------------------GRIVEGDKVLD 320
+ +Y+ + A+ L+NE +I + +V
Sbjct: 115 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P Y + L K G ++EA ++ + M+ P+ YN+++ G+C A
Sbjct: 175 EMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLF-QRMLDSGITPSAVTYNVVIHGMCLA 233
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A+ K M + GC + T+ IL+D C+ G+ EA R+L+ M + P V T
Sbjct: 234 YTLDEALELFKSMRSK-GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT 292
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+ LI GLCSI + +A LE+M+ + P + ++L+ +C
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 215/443 (48%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + +TE ++++M C + F +R G++ EA L +
Sbjct: 196 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 255
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
C+ ++ LL+ + + + + A + R+ LN+++ V+ C
Sbjct: 256 MTKGCMPGVMTYGFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGC 305
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y ILM GLC R+ A LL M +KG
Sbjct: 306 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM----EKKGF 361
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y +L + C G D +LE++ KGL + + C DG ++ A
Sbjct: 362 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR-MDEAM 420
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
LI E +G P + SY+ + L N ++ E + + + + +G + + Y + AL
Sbjct: 421 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 480
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+DG +A+ + +E ++ G + V YN L+K +C GN +++ L++M+++ G
Sbjct: 481 LRDGRWQDAVRLAKEMILHGCSLDVVS-YNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKP 538
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y IL+ LC++ R +A + ++ML + P + TYN LI GLC +G + A+ L
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ PDI ++ L++ C
Sbjct: 599 EKLHNENVHPDIITYNILISWHC 621
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 212/443 (47%), Gaps = 24/443 (5%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
PV AS G L + R + ++ + D F A R R G+ +EA++L +
Sbjct: 129 PVSASQGG-LPRARRFALYRRMVHR---DRVPPTTFTFGVAARALCRLGRADEALALLRG 184
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL---FLRSCYGWEVKSRIQSLNLLMDVL 161
+++ CV + T++ + + + EAA +L L C + + + + ++ +
Sbjct: 185 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC-----AADVNTFDDVVRGM 239
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C R A + M +GC P +Y L++GLC R+ +EA +M R+ +
Sbjct: 240 CGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AMLGRVPEL-- 293
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V++ T++ +GK+ +A ++ E + KG + P + + I + I A
Sbjct: 294 --NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ-PDAHTYSILMHGLCKLGRIGSAV 350
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ E +G P++ +Y+ + G + +L+EM KG + Y + AL
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
KDG +DEA+ +I+E +G P + YN ++ LC+ A + + ++ G VA
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVA 468
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
NG TY ++ L RDGR+ +A R+ +EM++ V +YN LI+ +C G +++ L
Sbjct: 469 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 528
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
EEM + P+ ++ L++ +C
Sbjct: 529 EEMAEKGIKPNNVSYNILISELC 551
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 15/305 (4%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P ++ + + LC R +EA LL M ++ G D V+Y+T++ ALCDQG + +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGM----ARHGCVPDAVLYQTVIHALCDQGGVTE 212
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A +L ++L G A + + C G E A+ L++ + +G +P + +Y +
Sbjct: 213 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFL- 270
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSL--VMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
L R+ + D+ + G P L V++ + +G + EA E+ E +KG
Sbjct: 271 --LQGLCRVRQADEARAML---GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y+IL+ GLC G AV L++M K+ G N TY I++ C++G + +
Sbjct: 326 C-QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDD 383
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+LEEM + + YN +I LC G+ EA+ ++EM SQ PDI +++++
Sbjct: 384 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 443
Query: 482 SVCCN 486
+C N
Sbjct: 444 HLCNN 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 166/366 (45%), Gaps = 9/366 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
++ ++IG ++ E E+ + M C+ ++ + + G++ AV L + +
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
+ ++ +L K + L S G + S Q N ++ LC+
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS--QGYNGMIYALCKDG 414
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A+ + QEM QGC PD SY+ ++ LCN+ ++ EA H MF + ++G +
Sbjct: 415 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH----MFENLLEEGVVANG 470
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ Y T++ AL G+ QDA+++ ++++ G + + C DG +++ + L+
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG-NVDRSLVLLE 529
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E +G P+ SY+ + +L E R+ + ++ +M +G P +V Y + L K G
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ AL ++ E++ P + YNIL+ C A M L + V V +
Sbjct: 590 WMHAALNLL-EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRI 648
Query: 406 YGILVD 411
IL D
Sbjct: 649 MQILPD 654
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y MI L + R+ E +I +M+ C + T I Q+ EA +F
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 458
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+NL + V ++NT++ ++++ + + A + L C + S N L+
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC-----SLDVVSYNGLIK 513
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+C+ D +L + +EM +G P+ SY+IL+ LC +RR+ +A L M +
Sbjct: 514 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML----NQ 569
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
G DIV Y TL+ LC G + A+ +LEK+
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 243/558 (43%), Gaps = 90/558 (16%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V +P+ L+P ++ +++K +K+P A +F A ++P Y H+ VY ++ LSE+ +
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSAT-RHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ +++ ++ C+C + V + I+TY + ++A+ +FK + + F C +S+NTL
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 122 LKEMVKESKLEAAHILFLRSCYGW----EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
L V EA + + S + + V +Q+ N+L+ + C+ + + A M
Sbjct: 121 LNAFV-----EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+G PD SY ++ L +L++A L F +S++G D+ Y L+
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALEL----FDEMSERGVAPDVTCYNILIDGFLK 231
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRH-----------RIDLCP---------------- 270
+ + AM++ +++L P + H R+D C
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 271 ---------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
C+ G +++ A+S+ NE R + +Y+ M G+I E ++
Sbjct: 292 TYSSLIHGLCDAG-NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K ++V Y + L ++G +DEA + KG + Y I + GLC G
Sbjct: 351 MEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKG-YAADKTTYGIFIHGLCVNG 408
Query: 382 --NSAVAVM---------------------------------YLKKMSKQVGCVANGETY 406
N A+ VM +K+MSK G N
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH-GVELNSHVC 467
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GL RD R EAS L EM P V +YN+LI GLC GK EA +++EM+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 467 QAKLPDISVWSSLVASVC 484
PD+ +S L+ +C
Sbjct: 528 NGWKPDLKTYSILLCGLC 545
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 214/491 (43%), Gaps = 37/491 (7%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
KQ + +L + E PN + Y +I + + + + +D M + +
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
++T I A+AG+L++A+ LF +S+ +N L+ +KE + A L+
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
R V +++ N+++ L +C R D L +++ M D +Y L+ GLC+
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 200 RRLNEATHLLYSM------------------------------FWRISQKGSGEDIVIYR 229
+++A + + WRI + + +IV Y
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ L + GKI +A I + KG A K+ C +G + A ++ E
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY-VNKALGVMQEVES 422
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
GG + +Y+++ L + R+ E ++ EM G + + A + L +D + E
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A EM K PTV YNIL+ GLC AG A ++K+M + G + +TY IL
Sbjct: 483 A-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSIL 540
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLCRD + A + + L V +N+LI GLCS+GK +A+ + M +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 470 LPDISVWSSLV 480
++ +++L+
Sbjct: 601 TANLVTYNTLM 611
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 215/468 (45%), Gaps = 18/468 (3%)
Query: 20 KQKSPLTALKIFK---EAKEKYPNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
K+K TA++++ E YPN + HN MI LS+ R+ + ++ ++MK +
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHN-----IMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
E +++ I AG +++A S+F L + ++NT+L + K++ +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES- 344
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L L + I S N+L+ L + + D A +++ M +G D+ +Y I + G
Sbjct: 345 -LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + +N+A ++ + G D+ Y +++ LC + ++++A +++++ + G
Sbjct: 404 LCVNGYVNKALGVMQ----EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
++ + + D E A + E G P++ SY+ + L G+ E
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGE-ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM G+ P L Y L L +D +D ALE+ + + G V ++NIL+
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG-LETDVMMHNILIH 577
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC G A+ + M + C AN TY L++G + G A+ + M
Sbjct: 578 GLCSVGKLDDAMTVMANMEHR-NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P + +YN +++GLC A+ + ++ + P + W+ LV +V
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 10/321 (3%)
Query: 168 DLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL VF+ M + GC P SY+ L+ ++ + S+F G ++
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVE----SLFAYFETAGVAPNLQ 150
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C + + + A L+ + ++G K P + + ++ A L +E
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
RG P + Y+ + E ++ D + +P++ + ++ L K G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD+ L+ I E M + + Y+ L+ GLCDAGN A ++ ++ + + T
Sbjct: 270 RVDDCLK-IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI-DVVT 327
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G CR G+ E+ + M ++ V +YN+LI+GL GK EA M M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNILIKGLLENGKIDEATMIWRLMP 386
Query: 466 SQAKLPDISVWSSLVASVCCN 486
++ D + + + +C N
Sbjct: 387 AKGYAADKTTYGIFIHGLCVN 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I G+L++A+++ N+ NC ++NTL++ K A +++ Y
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW-GYMYKMG 634
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
++ I S N +M LC CR A+ F + G +P +++IL++ + N
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 213/442 (48%), Gaps = 14/442 (3%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFK 104
P Y ++I L + R+ ++ + + + + ++ +I+ YARAG+L AV F+
Sbjct: 36 PAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQ 163
+ F C ++N ++ +V + + AH +++R G +R ++ L C
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRL--KSFCL 153
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R +AL + + + +GC +Y +++GL A HL M R
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR----DVFP 209
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + +L ALC +G + ++ +L K+L++G+ A K + C DG +E A +L
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR-LEEAVAL 268
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ E + P + +Y+ + L + ++ E + L M +G P Y + K
Sbjct: 269 V-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVAN 402
GM+ EA E++++ + KG FVP Y L+ GLC G+ A+ ++ + +K + +
Sbjct: 328 SGMLQEATELLKDAVFKG-FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLK--PD 384
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y LV GLCR G L A +V+ EM+ P + TYN++I GLC +G +A + +
Sbjct: 385 LVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMN 444
Query: 463 EMISQAKLPDISVWSSLVASVC 484
+ I + LPD+ +++L+ C
Sbjct: 445 DAIVKGYLPDVFTFNTLIDGYC 466
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 196/419 (46%), Gaps = 23/419 (5%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C+ K + + T +R G A LF + + +FN +L + ++ + +
Sbjct: 171 GCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMES 230
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY--PDRESYHIL 192
L + ++ + N+ + LC+ R + A+ + + M G Y PD +Y+ L
Sbjct: 231 GALLAKVLKRGMSANKF-TCNIWIRGLCEDGRLEEAVALVERM---GAYVAPDVVTYNTL 286
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
M+GLC D ++ EA L R+ +G D Y T++ C G +Q+A ++L+ +
Sbjct: 287 MRGLCKDSKVQEAAQYL----GRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAV 342
Query: 253 RKGLKAPKSRRHRIDLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
KG P R+ C C +G DIE A L NEA + P L Y+++ L
Sbjct: 343 FKGF-VPD----RVTYCSLINGLCAEG-DIERALELFNEAQAKDLKPDLVVYNSLVKGLC 396
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+G I+ +V++EM +G P + Y + L K G + +A V+ + +VKG ++P V
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG-YLPDV 455
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+N L+ G C A+ +++M G + TY +++GLC+ G+ E + E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMW-TYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EM+++ P TYN+LI C I + EA + M +PD +++L+ C N
Sbjct: 515 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 46/436 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR G+L EAV+L + + + + ++NTL++ + K+SK++ A R
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAYVAPDVV-TYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N ++D C+ A + ++ F+G PDR +Y L+ GLC + + A
Sbjct: 312 IPDDF-TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L F K D+V+Y +L+ LC QG I A+Q++ +++ +G P + I
Sbjct: 371 EL----FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCH-PDIWTYNI 425
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTK 325
+ +I A ++N+A+++G +P + +++ + ID Y ++ ++++ M T
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL-IDGYCKRLKLDSALQLVERMWTY 484
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P ++ Y + L L K G E E EE ++KG P YNIL++ C
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR-PNAITYNILIENFCKINQLEE 543
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCR----DGRFL--------------------- 420
A + +M Q G V + ++ L+ G CR DG +L
Sbjct: 544 ASGVIVRMC-QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602
Query: 421 ----------EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
A ++ EM+ + Y P + TY +L+ GLC A L EMIS+ +
Sbjct: 603 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFV 662
Query: 471 PDISVWSSLVASVCCN 486
P ++ + ++ + N
Sbjct: 663 PSMATFGRMLNLLAMN 678
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 191/430 (44%), Gaps = 14/430 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + +++ E + + +M C D + T I Y ++G L EA L K+
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDA 341
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V ++ +L+ + E +E A LF ++K + N L+ LC R
Sbjct: 342 VFKGFVPDRVTYCSLINGLCAEGDIERALELF-NEAQAKDLKPDLVVYNSLVKGLC---R 397
Query: 167 SDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
L LH Q EM +GC+PD +Y+I++ GLC +++A ++ KG
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV----KGYLP 453
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + TL+ C + K+ A+Q++E++ G+ + + C G+ E
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE-VNET 512
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E +++G P+ +Y+ + + ++ E V+ M G P V + + +
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G +D A + ++ KG + T +NIL+ N +A +M + G +
Sbjct: 573 NGDLDGAYLLFQKLDEKG-YSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDL 630
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ILVDGLC+ A L EM+ + + P + T+ ++ L + EAV +
Sbjct: 631 YTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHI 690
Query: 464 MISQAKLPDI 473
M+ +P++
Sbjct: 691 MVRMGVVPEV 700
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L ++ + E+ E ++M C + I + + QL EA + +
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
Q V SFNTL+ + L+ A++LF + G+ + + N+L+
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA--DTFNILIGAYSSKL 609
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+A +F EM +G PD +Y IL+ GLC ++ A Y+ + KG +
Sbjct: 610 NMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA----YAHLAEMISKGFVPSM 665
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ +L L ++ +A+ I+ ++R G+ P+ +D D ++I K L+
Sbjct: 666 ATFGRMLNLLAMNHRVSEAVAIIHIMVRMGV-VPEV----VDTILSTDKKEIAAPKILVE 720
Query: 286 EALIRGGI 293
E + +G I
Sbjct: 721 ELMKKGHI 728
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 244/558 (43%), Gaps = 90/558 (16%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V +P+ L+P ++ +++K +K+P A +F A ++P Y H+ VY ++ LSE+ +T
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSAT-RHPGYAHSAVVYHHILRRLSEARMVT 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ +++ ++ C+C + V + I+TY + + A+ +FK + + F C +S+NTL
Sbjct: 61 HVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTL 120
Query: 122 LKEMVKESKLEAAHILFLRSCYGW----EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
L V EA + + S + + V +Q+ N+L+ + C+ + + A M
Sbjct: 121 LNAFV-----EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWM 175
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+G PD SY ++ L +L++A L F +S++ D+ Y L+
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKTGKLDDALEL----FDEMSERRVAPDVTCYNILIDGFLK 231
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRH-----------RIDLCP---------------- 270
+ + AMQ+ +K+L P + H R+D C
Sbjct: 232 EKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291
Query: 271 ---------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
C++G +++ A+S+ NE + R + +Y+ M G+I E ++
Sbjct: 292 TYSSLIHGLCDEG-NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + ++V Y + L ++G +DEA + KG + Y I + GLC G
Sbjct: 351 MEQRNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKG-YAADNTTYGIFIHGLCVNG 408
Query: 382 --NSAVAVM---------------------------------YLKKMSKQVGCVANGETY 406
N A+ VM +K+MSK G N
Sbjct: 409 YVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKH-GVELNSHVC 467
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GL RD R +AS ++ M P V +YN+LI GLC GK EA +++EM+
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 467 QAKLPDISVWSSLVASVC 484
PD+ +S L+ +C
Sbjct: 528 NGLKPDLKTYSILLGGLC 545
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 196/428 (45%), Gaps = 33/428 (7%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++T I A+ G+L++A+ LF +S+ +N L+ +KE + A L+ +
Sbjct: 187 YSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLL 246
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V +++ N+++ L +C R D L ++ M D +Y L+ GLC++ +
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNV 306
Query: 203 NEATHLLYSM------------------------------FWRISQKGSGEDIVIYRTLL 232
++A + + WRI ++ + +IV Y L+
Sbjct: 307 DKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILI 366
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
L + GKI +A I + KG A + C +G + A ++ E +GG
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGY-VNKALGVMQEVESKGG 425
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+ +Y+++ L + R+ E ++ EM G + + A + L +D + +A
Sbjct: 426 HLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDA-S 484
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++ M K +PTV YNIL+ GLC+AG A ++K+M + G + +TY IL+ G
Sbjct: 485 LLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN-GLKPDLKTYSILLGG 543
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LCRD + A + + L P V +N+LI GLCS+GK +A+ + M + +
Sbjct: 544 LCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 473 ISVWSSLV 480
+ +++L+
Sbjct: 604 LVTYNTLM 611
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 221/478 (46%), Gaps = 38/478 (7%)
Query: 20 KQKSPLTALKIFKEAKEK---YPNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
K+K A++++ + E YPN + HN MI LS+ R+ + ++ D+MK +
Sbjct: 231 KEKDHKMAMQLWDKLLEDSSVYPNVKTHN-----IMISGLSKCGRVDDCLKIWDRMKQNE 285
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM-----VKESK 130
E +++ I G +++A S+F L + ++NT+L +KES
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKES- 344
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
LE I+ R+ I S N+L+ L + + D A +++ M +G D +Y
Sbjct: 345 LELWRIMEQRN------SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYG 398
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
I + GLC + +N+A ++ + KG D+ Y +++ LC + ++++A ++++
Sbjct: 399 IFIHGLCVNGYVNKALGVMQE----VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE 454
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK----SLINEALIRGG-IPSLASYSAMAID 305
+ + G++ +C G I ++ SL+ + + G +P++ SY+ +
Sbjct: 455 MSKHGVELNSH------VCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICG 508
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G+ E + EM G P L Y L L +D ++ ALE+ + + G P
Sbjct: 509 LCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSG-LEP 567
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V ++NIL+ GLC G A+ + M + C AN TY L++G + A+ +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHR-NCTANLVTYNTLMEGYFKVRDSNRATVI 626
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
M P + +YN +++GLC + A+ + ++ + P + W+ LV +V
Sbjct: 627 WGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 137/321 (42%), Gaps = 10/321 (3%)
Query: 168 DLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL VF+ M + GC P SY+ L+ ++ + S+F G ++
Sbjct: 95 DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVE----SLFAYFETAGVAPNLQ 150
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C + + + A L + ++G K P + + ++ A L +E
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLNWMWKEGFK-PDVFSYSTVINDLAKTGKLDDALELFDE 209
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
R P + Y+ + E ++ D++ +P++ + ++ L K G
Sbjct: 210 MSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD+ L+ I + M + + Y+ L+ GLCD GN A ++ ++ + + T
Sbjct: 270 RVDDCLK-IWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI-DVVT 327
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G CR G+ E+ + M R+ V +YN+LI+GL GK EA M M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV-SYNILIKGLLENGKIDEATMIWRLMP 386
Query: 466 SQAKLPDISVWSSLVASVCCN 486
++ D + + + +C N
Sbjct: 387 AKGYAADNTTYGIFIHGLCVN 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++G L +I E+ Q E + I G+L++A+++ N+
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC ++NTL++ K A +++ Y ++ I S N ++ LC C R
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIW-GYMYKMGLQPDIISYNTILKGLCLCHR 654
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
A+ F + G +P +++IL++ + N +
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 229/507 (45%), Gaps = 44/507 (8%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG 73
L +++Q P AL++ A + + VY +I L + MK ++ +M+
Sbjct: 59 LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLE 132
+ E + + I +YAR ++A L N L F T+ +N LL + + SK++
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178
Query: 133 AAHILFLRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
L S Y ++ + + N ++D LC+ R++ A+ + +EM PD +
Sbjct: 179 -----LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETT 233
Query: 189 YHILMKGLCNDRRLNEATHL------------------LYSMFWRISQKGSG-------- 222
+ LM+G + + A L L + + ++ + G
Sbjct: 234 FTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEI 293
Query: 223 -----EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
D V + T + LC G + A+++L +L++G + + C CN+GE +
Sbjct: 294 ADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE-L 352
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E AK ++N+ + G +P +++ + + L E ++ E + E+ KG P++ +
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNIL 412
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ AL K G A+ + EE G P YNIL+ LC +G A A+ LK+M
Sbjct: 413 INALCKVGDPHLAVRLFEEMKSSGC-TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS- 470
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
GC + TY ++DGLC+ R EA V ++M + T+N LI GLC+ + +A
Sbjct: 471 GCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDA 530
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+++MIS+ P+ ++S++ C
Sbjct: 531 AELVDQMISEGLQPNNVTYNSILTHYC 557
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 216/464 (46%), Gaps = 16/464 (3%)
Query: 28 LKIFKEAKEKYPN------YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
L++F +A + N + N VY ++ +L+E ++I ++ +M E
Sbjct: 138 LQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVV 197
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR- 140
F T I RA Q AV + + +S + +F TL++ V+E +EAA L R
Sbjct: 198 TFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S G S ++N+L++ C+ R AL Q+ G PDR ++ + GLC +
Sbjct: 258 SEMGCSPTS--VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNG 315
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ A +L M Q+G D+ Y T++ LC+ G++++A I+ +++ G
Sbjct: 316 HVDHALKVLGLML----QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDT 371
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + + C + + +E A L E ++G P++ +++ + L G ++ +
Sbjct: 372 TTFNTLIVALCTENQ-LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFE 430
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM++ G P V Y + L G + +AL++++E V G TV YN ++ GLC
Sbjct: 431 EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV-TYNTIIDGLCKR 489
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A +M G N T+ L+DGLC R +A+ ++++M+ P T
Sbjct: 490 RRIEEAEEVFDQMDV-TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVT 548
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN ++ C G +A L+ M + D+ +++L+ +C
Sbjct: 549 YNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 191/434 (44%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+++ + L ++ + +V+ M + CE ++T I G+L EA + +
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ T +FNTL+ + E++LE A L R + + + N+L++ LC+
Sbjct: 363 VDSGCLPDTTTFNTLIVALCTENQLEEALDL-ARELTVKGLSPNVYTFNILINALCKVGD 421
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LA+ +F+EM GC PD +Y+IL+ LC+ +L +A LL M G + V
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM----EVSGCPQSTV 477
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ G+ G ++
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGI----------------------GRNAITFN 515
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
LI G L N RI + +++D+M ++G P+ V Y + L K G
Sbjct: 516 TLIDG--------------LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A ++++ M F V Y L+ GLC A + A+ L+ M + G + Y
Sbjct: 562 ISKAADILQT-MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM-RMKGMKPTPKAY 619
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA +L EM
Sbjct: 620 NPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMA 679
Query: 466 SQAKLPDISVWSSL 479
+P+ S + L
Sbjct: 680 DNGFIPEFSSFRML 693
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 312 IVEGDKV------LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+ EG K+ EM ++G P +V + + AL + A+ ++EE M P
Sbjct: 171 LAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEE-MSSCDVAP 229
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ L++G + G S A + LK ++GC T +L++G C+ GR +A
Sbjct: 230 DETTFTTLMEGFVEEG-SIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+++ + + P T++ + GLC G A+ L M+ + PD+ +S+++ + C
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI-NCLC 347
Query: 486 NTADLNVCRKTLEQL 500
N +L + + Q+
Sbjct: 348 NNGELEEAKGIVNQM 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 38/248 (15%)
Query: 276 DIEGAKSLINEALIR--GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
D E A ++N AL R G PS Y + L G ++ EMR +G L +
Sbjct: 68 DPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGL 127
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK------------------ 375
++ + + + + D+A +++ ++ VYN LL
Sbjct: 128 VQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEM 187
Query: 376 -----------------GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
LC A + AV+ L++MS + T+ L++G +G
Sbjct: 188 SSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSS-CDVAPDETTFTTLMEGFVEEGS 246
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
A R+ M P T NVLI G C +G+ +A+ ++++ I+ PD +S+
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 479 LVASVCCN 486
V +C N
Sbjct: 307 FVNGLCQN 314
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 214/480 (44%), Gaps = 55/480 (11%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WPR LTP L+ +I +Q P +L+IF A +P+ H ++ LS + R +
Sbjct: 50 WPRRLTPHNLASLISRQHDPDLSLQIFHHA---HPSLSHAPQPLHALFLKLSRARRFYHL 106
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ + + T IR Y AG+ A+ +F +S N LL
Sbjct: 107 ESLLTHLPNPP---PEPPLTTLIRAYGLAGKPLSALRIFLKFQPLG----VRSLNALLNA 159
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ + AH +F S + + + S N+L+ LC+ D+A+ V EM G P
Sbjct: 160 LVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVP 219
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ SY ++ G + A + F I KG D+ Y L+ C GK+ DA
Sbjct: 220 NVVSYSTVLGGFVFKGDMESAMRV----FGEILDKGWMPDVTSYTVLMSGFCRLGKLVDA 275
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++++ L+ E ++ PS +Y M I
Sbjct: 276 IRMMD---------------------------------LMEENRVQ---PSEVTYGVM-I 298
Query: 305 DLYNEGRIV-EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ Y +GR E +L++M KG PS V+ + L ++G V+ A EV + KG
Sbjct: 299 EAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWR 358
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
V V + ++ LC G A L ++ K G VA+ TY L+ G+C G+ EA
Sbjct: 359 VGGA-VVSTIVHWLCKEGKVVEARGVLDELEK--GEVASLMTYNTLIAGMCERGQLCEAG 415
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R+ +EM+ + P TYNVL++G C +G EA+ LEEM+ LP+ S +S LV +
Sbjct: 416 RLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGI 475
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++V L AL K VD A+ V++E + G VP V Y+ +L G G+ A+
Sbjct: 184 PNVVSCNILLKALCKRNEVDVAVRVLDEMSLMG-LVPNVVSYSTVLGGFVFKGDMESAMR 242
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++ + G + + +Y +L+ G CR G+ ++A R+++ M P TY V+I
Sbjct: 243 VFGEILDK-GWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAY 301
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
C K EAV LE+M+ + +P + +CC DL
Sbjct: 302 CKGRKPGEAVNLLEDMVEKGLVPS--------SVLCCKVVDL 335
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
VR N LL L +A K +++ V N + IL+ LC+ A RVL
Sbjct: 150 VRSLNALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVL 209
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM + P V +Y+ ++ G G A+ E++ + +PD++ ++ L++ C
Sbjct: 210 DEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFC 267
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 206/459 (44%), Gaps = 13/459 (2%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A++ + H+G Y S+I L +N + +E+ M C +
Sbjct: 26 LNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + G L EA L K + + V ++NT++ + K ++E A +LF
Sbjct: 86 IIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLG 145
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+R +S N ++ LCQ + D A VF EM+ + PD SY IL+ GL +LNEA
Sbjct: 146 CTPNR-RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y +F R+ G V Y ++ +C + +A+++ + + KG + + +
Sbjct: 205 ----YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A L+ G +P + +YS + L + R+ + +L++M +
Sbjct: 261 LIDAHCKRGK-MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V + L K G + EA EV++ MV P V YN L+ G C AG +
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDA-MVSSGQSPDVVTYNTLVHGHCRAGQTER 378
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A L M + G N TY LV GLC+ R EA V +M P + TY LI
Sbjct: 379 ARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G CS G+ + EM+ PD V+ +L A +C
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 170/368 (46%), Gaps = 8/368 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ L+ + K KL A LF + + S + +L+ LC D A +F +
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHG-LCMANSFDDARELFAD 70
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +GC P +Y++++ C L EA L+ M + G D+V Y T++ LC
Sbjct: 71 MNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI----EDGHVPDVVTYNTVMDGLC 126
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G++++A+ + ++ R G P R H + I+ A + +E R P
Sbjct: 127 KSGRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY + L G++ E K+ M G PS V Y + + +DEALE+ +
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
KG P+ +NIL+ C G A LK+M+ G V + TY L+ GLC
Sbjct: 246 MRSKGCR-PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD-GHVPDVVTYSTLISGLCSI 303
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R +A +LE+M+ R P V T N LI GLC G+ EA L+ M+S + PD+ +
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 477 SSLVASVC 484
++LV C
Sbjct: 364 NTLVHGHC 371
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 207/446 (46%), Gaps = 16/446 (3%)
Query: 27 ALKIFKEAKEK--YPNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
AL +F E + PN R HN ++I L + ++I + +V +M+ +
Sbjct: 134 ALLLFNEMERLGCTPNRRSHN-----TIILGLCQQSKIDQACQVFHEMEARDIPPDSWSY 188
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
I A+AG+LNEA LF+ + ++N ++ M L+ A LF +S
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF-KSMR 247
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + N+L+D C+ + D A + + M G PD +Y L+ GLC+ R++
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A HLL M R + +V TL+ LC G+I++A ++L+ ++ G
Sbjct: 308 DARHLLEDMVKRQCKP----TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C G+ E A+ L+++ + RG P++ +Y+A+ L R+ E V +M+
Sbjct: 364 NTLVHGHCRAGQ-TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+ G P+L Y A + G VD L++ E MV P VY L LC +G S
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE-MVCAGISPDHVVYGTLAAELCKSGRS 481
Query: 384 AVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A A+ L++ + + A G E Y VDGL G+ A + +M+ P E
Sbjct: 482 ARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCA 541
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GLC G+ EA LEE++ A
Sbjct: 542 SLVAGLCKSGQGGEARAVLEEIMDLA 567
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 191/437 (43%), Gaps = 43/437 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L+++ ++ + +++ ++ + + I A ++A LF +++
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C ++N ++ K LE A L + V + + N +MD LC+ R
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPD-VVTYNTVMDGLCKSGRV 131
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ AL +F EM+ GC P+R S++ ++ GLC ++++A + F + + D
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV----FHEMEARDIPPDSWS 187
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ L GK+ +A ++ ++L G+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGI------------------------------- 216
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
PS +Y+ + + + E ++ MR+KG PS + + A K G +
Sbjct: 217 -----TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA +++ M VP V Y+ L+ GLC A L+ M K+ C T
Sbjct: 272 DEAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ-CKPTVVTQN 329
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ GLC+ GR EA VL+ M+ P V TYN L+ G C G+ A L +M+++
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Query: 468 AKLPDISVWSSLVASVC 484
P++ +++LV+ +C
Sbjct: 390 GLAPNVVTYTALVSGLC 406
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 206/456 (45%), Gaps = 11/456 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L +S R+ E + ++M+ C T I + ++++A +F +
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + S+ L+ + K KL A+ LF R S + + N+++ +C
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAV-TYNVVIHGMCLAYT 235
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL +F+ M +GC P R +++IL+ C +++EA LL R++ G D+V
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK----RMTDDGHVPDVV 291
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC ++ DA +LE ++++ K ++ + C G I+ A+ +++
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAREVLDA 350
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P + +Y+ + G+ ++L +M +G P++V Y A ++ L K
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA V + G P + Y L+ G C AG + +M G + Y
Sbjct: 411 LPEACGVFAQMKSSGC-APNLFTYTALILGFCSAGQVDGGLKLFGEMV-CAGISPDHVVY 468
Query: 407 GILVDGLCRDGRFLEASRVLEEML--IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
G L LC+ GR A +L E +RS E Y + GL GK A+ ++ +M
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDM 528
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ +LP +SLVA + C + R LE++
Sbjct: 529 VRGGQLPAPERCASLVAGL-CKSGQGGEARAVLEEI 563
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 147/342 (42%), Gaps = 40/342 (11%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ + PD SY IL+ GL +LN+A L F ++ G V Y +L+ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDL----FQKLLHSGVTPSTVAYTSLIHGLC 56
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
DA ++ + R+G + I C G +E A LI + + G +P +
Sbjct: 57 MANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGM-LEEACDLIKKMIEDGHVPDV 115
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L GR+ E + +EM G P+ + + L + +D+A +V E
Sbjct: 116 VTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 357 ----------------------------------EMVKGTFVPTVRVYNILLKGLCDAGN 382
M+ P+ YN+++ G+C A
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ K M + GC + T+ IL+D C+ G+ EA R+L+ M + P V TY+
Sbjct: 236 LDEALELFKSMRSK-GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYS 294
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI GLCSI + +A LE+M+ + P + ++L+ +C
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 219/466 (46%), Gaps = 14/466 (3%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + AL+ FK +++H Y MI L+ + ++ ++ QMK +
Sbjct: 50 LKHEHDITLALEYFKSIANS-KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGIS 108
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C + +F + I +Y RAG +A+ F + F + +N +L ++ E++ + + +
Sbjct: 109 CSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPI 168
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ + ++ + + N+L+ LC+ R D A + EM +GC PD SY L+ LC
Sbjct: 169 Y-SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ EA L S + +Y L+ +C + ++A Q+L++++ KG+
Sbjct: 228 KLGKVKEARELAMSF---------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + +D ++E + +++ + RG P+L +++++ + +G E
Sbjct: 279 -PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
D M +G P++V Y A + L + +A+ V + + G P VR Y+ L+ G
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC-CPNVRTYSALIDGY 396
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG+ A M GC N Y +VD LCR+ F +A ++E M + + P
Sbjct: 397 AKAGDLDGASEVWNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
T+N I+GLC G+ A+ ++M + P+ + ++ L+ S+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 216/499 (43%), Gaps = 59/499 (11%)
Query: 31 FKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ Y N + +G P Y ++ L ++NR+ +++ +M C+ + + T
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSC 142
I + + G++ EA L +++T S +N L+ + KE E A L L
Sbjct: 222 LISSLCKLGKVKEAREL--------AMSFTPSVPVYNALINGVCKEYTFEEAFQL-LDEM 272
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + S +++ L +L+L V +M +GC P+ ++ L+KG L
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF----L 328
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+H + R+ ++G ++V Y L+ LC + + DA+ + ++ G P R
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC-CPNVR 387
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA-----IDLYNE-------- 309
+ + D++GA + N + G P++ +Y+ M ++N+
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 310 ----------------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
GR+ KV D+M G +P+ Y L +L KD
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA ++++ +G + V YN ++ G C AG A+ L KM + G + T
Sbjct: 508 GEAFGLVKDMEHRGIELNLV-TYNTIIYGYCCAGMLGEALELLGKMVVR-GTKPDAITVN 565
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
I++D C+ G+ A ++++ + + P + Y LI G+C+ EA+++L M+S+
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 468 AKLPDISVWSSLVASVCCN 486
P+++ W+ LV + N
Sbjct: 626 GISPNVATWNVLVRHLFSN 644
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 189/449 (42%), Gaps = 14/449 (3%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S L L KEA+E ++ + PVY ++I + + E +++D+M +
Sbjct: 224 SSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ T I + AG + ++++ + C +F +L+K + A + F
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA-LDFWDRM 342
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V + + N LM LC R A+ VF +M+ GC P+ +Y L+ G L
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A+ + W I+ G ++V Y ++ LC A ++E + +
Sbjct: 403 DGASEVWN---WMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C G ++ A + ++ G P+ +Y+ + L + R E ++ +M
Sbjct: 459 FNTFIKGLCGSGR-VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G +LV Y + GM+ EALE++ + +V+GT P NI++ C G
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT-KPDAITVNIVIDAYCKQGK 576
Query: 383 SAVAVMYLKKMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+A+ + ++S +A Y L+ G+C EA L ML P V
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIA----YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVA 632
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
T+NVL+R L S AV +L+ ++
Sbjct: 633 TWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 219/466 (46%), Gaps = 14/466 (3%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + AL+ FK +++H Y MI L+ + ++ ++ QMK +
Sbjct: 50 LKHEHDITLALEYFKSIANS-KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGIS 108
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C + +F + I +Y RAG +A+ F + F + +N +L ++ E++ + + +
Sbjct: 109 CSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPI 168
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ + ++ + + N+L+ LC+ R D A + EM +GC PD SY L+ LC
Sbjct: 169 Y-SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC 227
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ EA L S + +Y L+ +C + ++A Q+L++++ KG+
Sbjct: 228 KLGKVKEARELAMSF---------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + +D ++E + +++ + RG P+L +++++ + +G E
Sbjct: 279 -PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
D M +G P++V Y A + L + +A+ V + + G P VR Y+ L+ G
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC-CPNVRTYSALIDGY 396
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG+ A M GC N Y +VD LCR+ F +A ++E M + + P
Sbjct: 397 AKAGDLDGASEVWNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
T+N I+GLC G+ A+ ++M + P+ + ++ L+ S+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 216/499 (43%), Gaps = 59/499 (11%)
Query: 31 FKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ Y N + +G P Y ++ L ++NR+ +++ +M C+ + + T
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSC 142
I + + G++ EA L +++T S +N L+ + KE E A L L
Sbjct: 222 LISSLCKLGKVKEAREL--------AMSFTPSVPVYNALINGVCKEYTFEEAFQL-LDEM 272
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + S +++ L +L+L V +M +GC P+ ++ L+KG L
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF----FL 328
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+H + R+ ++G ++V Y L+ LC + + DA+ + ++ G P R
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC-CPNVR 387
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA-----IDLYNE-------- 309
+ + D++GA + N + G P++ +Y+ M ++N+
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 310 ----------------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
GR+ KV D+M G +P+ Y L +L KD
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA ++++ +G + V YN ++ G C AG A+ L KM + G + T
Sbjct: 508 GEAFGLVKDMEHRGIELNLV-TYNTIIYGYCCAGMLGEALELLGKMVVR-GTKPDAITVN 565
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
I++D C+ G+ A ++++ + + P + Y LI G+C+ EA+++L M+S+
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 468 AKLPDISVWSSLVASVCCN 486
P+++ W+ LV + N
Sbjct: 626 GISPNVATWNVLVRHLFSN 644
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 189/444 (42%), Gaps = 16/444 (3%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S L L KEA+E ++ + PVY ++I + + E +++D+M +
Sbjct: 224 SSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM-VKESKLEAAHILFLRS 141
+ T I + AG + ++++ + C +F +L+K +K EA + F
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA--LDFWDR 341
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + N LM LC R A+ VF +M+ GC P+ +Y L+ G
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A+ + W I+ G ++V Y ++ LC A ++E + +
Sbjct: 402 LDGASEVWN---WMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G ++ A + ++ G P+ +Y+ + L + R E ++ +
Sbjct: 458 TFNTFIKGLCGSGR-VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G +LV Y + GM+ EALE++ + +V+GT P NI++ C G
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT-KPDAITVNIVIDAYCKQG 575
Query: 382 NSAVAVMYLKKMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+A+ + ++S +A Y L+ G+C EA L ML P V
Sbjct: 576 KVNIAIQLMDRLSAGKWHPDIIA----YTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLE 462
T+NVL+R L S AV +L+
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLD 655
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 230/493 (46%), Gaps = 28/493 (5%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS----CECKDSV 82
LK +PN++H+ ++M+ L R++E + I +M S + +S+
Sbjct: 117 GLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESL 176
Query: 83 FATA-------------IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+T +RTY +A +L E F+ L + + N LL +V+
Sbjct: 177 ISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 236
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ A ++ G ++ + +LN++++ LC+ R+ + + +M+ +G + D +Y
Sbjct: 237 WVDLAWEIYGEVVRGG-IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ C + + EA LL S S +G ++ Y +L+ LC GK A +L
Sbjct: 296 NTLINAYCREGLVEEAFQLLNS----FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L+ GL P + + L ++I A+ + +E RG +P L S+S++ L
Sbjct: 352 EMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + + EM G P V+Y + ++G + +AL++ +E + +G F+ V
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV-T 469
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L GLC A A M +M ++ G V + T+ L+ G C+DG +A + E M
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN--- 486
+ + P TYN LI G C G+ A ++MI + +PD + +++ C +
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 487 TADLNVCRKTLEQ 499
LN+C + LE+
Sbjct: 589 PEALNLCDQMLEK 601
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 195/436 (44%), Gaps = 12/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + E ++++ E + + + G+ + A + +
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 107 SQFNCVNWTQSFNTLLKEMVK-ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
Q ++NTLL E+ + ++ LEA I S G V + S + L+ VL +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG--VLPDLVSFSSLIGVLARNG 411
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
AL F+EM+ G PD Y IL+ G C + L++A + M R G D+
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR----GCFMDV 467
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T L LC + DA + +++ +G+ + C DG +++ A +L
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG-NMDKALNLF- 525
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
EA++R + P +Y+ + G + ++ D+M K P + Y L
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G++ EAL + ++ + KG P + N L+KG C +G+ A YL KM G + +
Sbjct: 586 GLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSF 643
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y L+DG ++ +A ++ EM R + TYN+++ G C+ GK EA L +M
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Query: 465 ISQAKLPDISVWSSLV 480
I PD + +SSL+
Sbjct: 704 IEIGINPDGATYSSLI 719
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 8/426 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + + K+V+ +M + + T + R + EA +F +
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ + SF++L+ + + L A + F V + +L+D C+
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV-IYTILIDGFCRNGA 447
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL + EM +GC+ D +Y+ + GLC + +A L F + ++G D
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML----FNEMVERGMVPDFY 503
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ C G + A+ + E ++R LK K + + C GE + AK L ++
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE-MGRAKELWDD 562
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ + IP SY + + G + E + D+M KG P+LV + + G
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A E + + M+ +P YN L+ G N A + + +M K+ G N TY
Sbjct: 623 MPKAYEYLSK-MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITY 680
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++++G C +G+ EA +VL +M+ P TY+ LI G S EA + +EM+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 467 QAKLPD 472
+ +PD
Sbjct: 741 RGLVPD 746
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 230/493 (46%), Gaps = 28/493 (5%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS----CECKDSV 82
LK +PN++H+ ++M+ L R++E + I +M S + +S+
Sbjct: 117 GLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESL 176
Query: 83 FATA-------------IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+T +RTY +A +L E F+ L + + N LL +V+
Sbjct: 177 ISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 236
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ A ++ G ++ + +LN++++ LC+ R+ + + +M+ +G + D +Y
Sbjct: 237 WVDLAWEIYGEVVRGG-IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ C + + EA LL S S +G ++ Y +L+ LC GK A +L
Sbjct: 296 NTLINAYCREGLVEEAFQLLNS----FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L+ GL P + + L ++I A+ + +E RG +P L S+S++ L
Sbjct: 352 EMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + + EM G P V+Y + ++G + +AL++ +E + +G F+ V
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV-T 469
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L GLC A A M +M ++ G V + T+ L+ G C+DG +A + E M
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN--- 486
+ + P TYN LI G C G+ A ++MI + +PD + +++ C +
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 487 TADLNVCRKTLEQ 499
LN+C + LE+
Sbjct: 589 PEALNLCDQMLEK 601
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 195/436 (44%), Gaps = 12/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + E ++++ E + + + G+ + A + +
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 107 SQFNCVNWTQSFNTLLKEMVK-ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
Q ++NTLL E+ + ++ LEA I S G V + S + L+ VL +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG--VLPDLVSFSSLIGVLARNG 411
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
AL F+EM+ G PD Y IL+ G C + L++A + M R G D+
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR----GCFMDV 467
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T L LC + DA + +++ +G+ + C DG +++ A +L
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG-NMDKALNLF- 525
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
EA++R + P +Y+ + G + ++ D+M K P + Y L
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G++ EAL + ++ + KG P + N L+KG C +G+ A YL KM G + +
Sbjct: 586 GLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSF 643
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y L+DG ++ +A ++ EM R + TYN+++ G C+ GK EA L +M
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Query: 465 ISQAKLPDISVWSSLV 480
I PD + +SSL+
Sbjct: 704 IEIGINPDGATYSSLI 719
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 8/426 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + + K+V+ +M + + T + R + EA +F +
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ + SF++L+ + + L A + F V + +L+D C+
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV-IYTILIDGFCRNGA 447
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL + EM +GC+ D +Y+ + GLC + +A L F + ++G D
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML----FNEMVERGMVPDFY 503
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ C G + A+ + E ++R LK K + + C GE + AK L ++
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE-MGRAKELWDD 562
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ + IP SY + + G + E + D+M KG P+LV + + G
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A E + + M+ +P YN L+ G N A + + +M K+ G N TY
Sbjct: 623 MPKAYEYLSK-MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITY 680
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++++G C +G+ EA +VL +M+ P TY+ LI G S EA + +EM+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 467 QAKLPD 472
+ +PD
Sbjct: 741 RGLVPD 746
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 10/392 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSL 154
L++A+S F + + T F LL + K +L L + + + + +L
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST--VLSLSTQMDSFGIPPDVYTL 150
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C RR A V ++ GC PD +++ L++GLC + ++ EA HL F
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL----FD 206
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ +G D+V Y TL+ LC G A+++L +++K + + I C D
Sbjct: 207 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDR 266
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A +L +E + +G P + +Y+++ L N +L+EM P++V++
Sbjct: 267 QVTE-AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+GM+ A +V++ M+K P V Y L+ G C AV M
Sbjct: 326 STVVDALCKEGMIAIAHDVVDM-MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ GCV N +Y IL++G C+ R +A +LE+M ++ TYN LI GLC +G+
Sbjct: 385 HK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 443
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A+ EM++ ++PD+ + L+ +C N
Sbjct: 444 QHAIALFHEMVASGQIPDLVTYRILLDYLCKN 475
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 44/415 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ +L A S+ L + C +FNTL++ + E K+ A LF ++ G
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT-IGEG 212
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + LM+ LC+ + A+ + + M + C P+ +Y+ ++ LC DR++ EA
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA- 271
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+++F + KG DI Y +L+ ALC
Sbjct: 272 ---FNLFSEMITKGISPDIFTYNSLIHALC------------------------------ 298
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+LC + + +L+NE + +P++ +S + L EG I V+D M +G
Sbjct: 299 NLC------EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y A + +DEA++V + + KG VP VR YNIL+ G C A
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC-VPNVRSYNILINGYCQIQRMDKA 411
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ L++MS Q G +A+ TY L+ GLC GR A + EM+ P + TY +L+
Sbjct: 412 MGLLEQMSLQ-GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 470
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
LC EA++ L+ + DI V++ + + C +L R LS
Sbjct: 471 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM-CRAGELEAARDLFSNLS 524
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 9/351 (2%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C+ ++ F T IR G++ EA+ LF ++ TL+ + K AA
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAA- 236
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
I LRS + + + N ++D LC+ R+ A ++F EM +G PD +Y+ L+
Sbjct: 237 IRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHA 296
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LCN T LL M ++V++ T++ ALC +G I A +++ ++++G
Sbjct: 297 LCNLCEWKHVTTLLNEMV----NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
++ + C E E K + + + +G +P++ SY+ + R+ +
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVK-VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 411
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+L++M +G V Y + L G + A+ + E + G +P + Y ILL
Sbjct: 412 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ-IPDLVTYRILLD 470
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
LC + A A++ LK + A+ Y I +DG+CR G LEA+R L
Sbjct: 471 YLCKNHHLAEAMVLLKAIEGS-NLDADILVYNIAIDGMCRAGE-LEAARDL 519
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 164/406 (40%), Gaps = 78/406 (19%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++I L +I E + D+ G+ + + T + + G + A+ L +++
Sbjct: 185 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMV 244
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q NC ++NT++ LC+ R+
Sbjct: 245 QKNCRPNVIAYNTIIDS------------------------------------LCKDRQV 268
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A ++F EM +G PD +Y+ L+ LCN T LL M ++V+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV----NSKIMPNVVV 324
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ T++ ALC +G I A +++ ++++G++
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVE------------------------------ 354
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P + +Y+A+ + E KV D M KG P++ Y + + +
Sbjct: 355 ------PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A+ ++E+ ++G TV YN L+ GLC G A+ +M G + + TY
Sbjct: 409 DKAMGLLEQMSLQGLIADTV-TYNTLIHGLCHVGRLQHAIALFHEMVAS-GQIPDLVTYR 466
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
IL+D LC++ EA +L+ + + + YN+ I G+C G+
Sbjct: 467 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+++++ L + I +V+D M E + + + +++EAV +F
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ CV +S+N L+ + +++ A L + + + + N L+ LC
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV-TYNTLIHGLCH 439
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A+ +F EM G PD +Y IL+ LC + L EA LL + I
Sbjct: 440 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA----IEGSNLDA 495
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
DI++Y + +C G+++ A + + +G A
Sbjct: 496 DILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 220/483 (45%), Gaps = 44/483 (9%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
+ P+ ++ +IK++ P AL+IF E+ + HN YA+++ L++S +
Sbjct: 53 KKPKFISHESAINLIKRETDPQRALEIFNRVAEQR-GFSHNNATYATILHKLAKSKKFQA 111
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLL 122
+ V+ QM ++C+ + +F ++ +++ V +F + + ++ +T L
Sbjct: 112 IDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCL 171
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD-FQG 181
+V+ ++++ L S ++ N+L+ C+ D A V +EM
Sbjct: 172 NLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHV 231
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
YP+ +Y L+ GLC RL EA L M +S+ D + Y L+ C K+
Sbjct: 232 SYPNLITYSTLINGLCGSGRLKEAIELFEEM---VSKDQILPDALTYNALINGFCHGEKV 288
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A++I+E + + G CN P++ +YSA
Sbjct: 289 DRALKIMEFMKKNG---------------CN---------------------PNVFNYSA 312
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ EGR+ E +V DEM++ G P V Y + + G VDEA+E++++
Sbjct: 313 LMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENK 372
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
TV +N++L GLC G A L+++ + G N +Y I+++ LCR+G +
Sbjct: 373 CRADTV-TFNVILGGLCREGRFEEARGMLERLPYE-GVYLNKASYRIVLNSLCREGELQK 430
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A++++ ML R P T N L+ LC GK +AVM L ++ P+ + W+ LV
Sbjct: 431 ATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVE 490
Query: 482 SVC 484
+C
Sbjct: 491 LIC 493
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++++ + R+ E KEV D+MK + + T I + RAG+++EA+ L K++
Sbjct: 310 YSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMR 369
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY------------------------ 143
+ C T +FN +L + +E + E A + R Y
Sbjct: 370 ENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQ 429
Query: 144 ----------GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
G V + N L+ LC+ + A+ + G P+ S+ +L+
Sbjct: 430 KATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLV 489
Query: 194 KGLCNDRRLNEATHLL 209
+ +C +R+L A LL
Sbjct: 490 ELICRERKLLPAFELL 505
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 223/479 (46%), Gaps = 12/479 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + +++ Q AL+ F A ++ YRH+ VY +M+ ILS++ K
Sbjct: 97 RSLKPRQVCAVLQLQTDERVALRFFYWADRQW-RYRHDPIVYYAMLEILSKTKLCQGAKR 155
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ M E + F + +Y+RAG+L A+ + + NT + +V
Sbjct: 156 VLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLV 215
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
++L+ A + FL E+ + + N L+ C R + A + EM F+GC PD+
Sbjct: 216 MGNRLDKA-VRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDK 274
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++R+ E L+ M + D V Y T + L G +A++
Sbjct: 275 ISYYTVMGFLCKEKRIKELRLLMEKM---LKDSNLLPDQVTYNTFVHMLSKHGHGDEALE 331
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L + + + K I C +G ++ AK ++NE +G IP + +Y+++ L
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGR-MDKAKEIVNEMFSKGCIPDVVTYTSVINGL 390
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE--EEMVKGTFV 364
E ++ + K+L +M G P+ V Y A L L K+G EA E++ EE ++
Sbjct: 391 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEX---WWI 447
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P Y++L+ G G S+ A +++M K+ G +L+ LC++ + EA R
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKK-GFFPTPVEINLLIQSLCQEEKVDEAKR 506
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+E+ L V + +I G C A+ L++M K PD+ +++++ ++
Sbjct: 507 FMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 199/459 (43%), Gaps = 46/459 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L + RI E++ ++++M DS D V + T + ++ G +EA+ +
Sbjct: 277 YYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 336
Query: 107 SQ----FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + V ++ ++ +E + E + +F + C + + +++ LC
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI-----PDVVTYTSVINGLC 391
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------- 209
Q R+ D A + ++M GC P+ SY L+ GLC + EA ++
Sbjct: 392 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAI 451
Query: 210 -YSM----FWRISQKGSGEDIV-------IYRT------LLFALCDQGKIQDAMQILEKI 251
YS+ F R + D+V + T L+ +LC + K+ +A + +E+
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC 511
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L G + C +D+E A SL+++ + P + +Y+ + L +GR
Sbjct: 512 LNNGCAVNVVNFTTVIHGFCQK-DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGR 570
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E K+ +M G+ P+ V Y + + G V++ L+++E+ + + YN
Sbjct: 571 IEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE---CRTAYN 627
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+++ LC GN A L K+ + + + T +L++ G L + V M
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKI-DANTCHMLIESYLSKGIPLMSYNVACRMFN 686
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
R+ P ++ + + L GK EA + + + ++
Sbjct: 687 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRI 725
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 16/259 (6%)
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND-------GEDIEGAKSLINEALIRG 291
GK+++AM+ L + + G++ DL CN G ++ A + I
Sbjct: 183 GKLRNAMRXLTMMQKAGIEP--------DLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +Y+ + + R+ + +++ EM KG P + Y + L K+ + E
Sbjct: 235 IXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELR 294
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++E+ + +P YN + L G+ A+ +L++ ++ V + Y +V
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVH 353
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
CR+GR +A ++ EM + P V TY +I GLC K +A L +M P
Sbjct: 354 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 413
Query: 472 DISVWSSLVASVCCNTADL 490
+ +++L+ +C N L
Sbjct: 414 NTVSYTALLNGLCKNGNSL 432
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 221/495 (44%), Gaps = 61/495 (12%)
Query: 5 WPRLLTPTYLSQIIK--KQKSPL-------------TALKIFKEAKEKYPNYRHNGPVYA 49
W RLL P L ++ + Q +P T++ IF+ A + Y H VY
Sbjct: 48 WERLLKPFDLKELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQ-KGYCHTFDVYH 106
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+I L + + +++ Q+K + ++S+F ++ Y RA +A + ++
Sbjct: 107 VLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGV 166
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C T +S N+++D+L +
Sbjct: 167 YCCEPT-----------------------------------FKSYNVVLDILVSANCPSV 191
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A +VF EM +G P ++ ++MK LC ++ A LL M ++ G + V+Y+
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM----TKHGCVPNSVVYQ 247
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ AL + ++ +A+++LE++ G + + C EGAK L++ L
Sbjct: 248 TLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAK-LVDRMLF 306
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P+ +Y + L G++ E +L+++ T P+ V + + K G +DE
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDE 362
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A + ++M+K P V +N L+ GLC G AV + MS GC N TY L
Sbjct: 363 ANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN-GCTPNLITYTTL 421
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+ + EA VL EM + + + YNVL+R LC GK +A+ L EM +
Sbjct: 422 LDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGC 481
Query: 470 LPDISVWSSLVASVC 484
PDI +++L+ +C
Sbjct: 482 KPDIFTFNTLIFGLC 496
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 199/437 (45%), Gaps = 15/437 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I L NRI E +++D+M D + + R G+++EA L +
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
N V++T L+ VK +L+ A+ + + + N L+ LC+
Sbjct: 341 TPNDVHFT----ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + +M GC P+ +Y L+ G C +L EA ++L M S KG +I+
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM----SAKGFELNIMG 452
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLIN 285
Y LL ALC GK+ A+ +L ++ KG K + + LC + ED A +L
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKED---ALALYR 509
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L+ G I + +Y+ + G I E K++++M +G + Y + A K G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++AL + +E MV+ VP+ N+L+ GLC G A+ L+ M + G + T
Sbjct: 570 ATEKALGLFDE-MVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHR-GLAPDVVT 627
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L++GLC+ G EA + ++ P TYN LI C G +A + L +
Sbjct: 628 YNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGV 687
Query: 466 SQAKLPDISVWSSLVAS 482
A +P+ W LV++
Sbjct: 688 ENAFIPNDVTWYILVSN 704
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 17/480 (3%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T + ++++ K+P AL+ F A E + HN Y M+ IL + + + + +
Sbjct: 87 TTVFEVLRLIKTPSKALQFFNWAPEL--GFTHNDQSYFLMLEILGRARNLNVARNFLFSI 144
Query: 72 K---GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
K + + +D F + IR+Y +AG E+V +F ++ +FN+LL ++K
Sbjct: 145 KRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKR 204
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ A +F + V + N+L+ C+ D F+EM C PD +
Sbjct: 205 GRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVT 264
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ L+ GLC ++N A +++ M + + D+V Y TL+ C + +I +A+ +
Sbjct: 265 YNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNP--DVVTYTTLVRGYCMKHEIDEALVVF 322
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAIDLY 307
E+++ KGLK P + + + + I+ K + AL GG IP + + +
Sbjct: 323 EEMVSKGLK-PNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHC 381
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV--- 364
N G + + +V ++M P Y + L + G + A ++ +E K +
Sbjct: 382 NAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDD 441
Query: 365 ---PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V Y + + LC G +A A +++ K+ + ++ IL+ G CR+G F
Sbjct: 442 GCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKR--GTQDPLSFKILIKGHCREGTFEA 499
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+L ML R + P +ETY LI GL G+ A LE+MI + +P+ S + S++A
Sbjct: 500 GYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 183/437 (41%), Gaps = 32/437 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
Y +++ L + ++ V++ M S V + T +R Y +++EA+ +F+
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFE 323
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ ++NTL+K + + K++ +F + G +LN LM+ C
Sbjct: 324 EMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNA 383
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK----- 219
+ AL VF++M PD +Y +L++ LC A L F +S+K
Sbjct: 384 GNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQL----FDELSEKEILLR 439
Query: 220 --GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G + Y+++ LC GK A ++ +++++G + P S + I C +G
Sbjct: 440 DDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIK-GHCREG-TF 497
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E L+ L R +P L +Y ++ L +G + + L++M P + +
Sbjct: 498 EAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSI 557
Query: 338 LAALFKDGMVDEALEVI----EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
LA L G E+ I E ++ + + T V + GL D V ++Y
Sbjct: 558 LARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLY---- 613
Query: 394 SKQVGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
ANG + L+ L + +FL A ++L L + ++ + +I GLC +
Sbjct: 614 -------ANGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKM 666
Query: 452 GKQYEAVMWLEEMISQA 468
+ EA E++ +
Sbjct: 667 KRHSEAFGLYYELVEKG 683
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G E +V + M++ G PS+V + + L L K G + A V +E + P
Sbjct: 170 GLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYT 229
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+NIL++G C + K+MS+ C + TY LVDGLCR G+ A V+ M
Sbjct: 230 FNILIRGFCKNSMVDEGFRFFKEMSR-FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGM 288
Query: 430 LIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +S P V TY L+RG C + EA++ EEM+S+ P+ +++L+ +C
Sbjct: 289 VKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLC 345
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 137/366 (37%), Gaps = 76/366 (20%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+ +VL + AL F G + +SY ++++ L R LN A + L+S+ R
Sbjct: 89 VFEVLRLIKTPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRS 148
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ ED + +L+ + G Q+++Q+ + G+
Sbjct: 149 NGTVKLED-RFFNSLIRSYGKAGLFQESVQVFNSMKSVGVS------------------- 188
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYE 335
PS+ +++++ + L GR V DEM T G P +
Sbjct: 189 -----------------PSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFN 231
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ K+ MVDE +E M + P + YN L+ GLC AG +A + M K
Sbjct: 232 ILIRGFCKNSMVDEGFRFFKE-MSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVK 290
Query: 396 Q-VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG------- 447
+ + TY LV G C EA V EEM+ + P TYN LI+G
Sbjct: 291 KSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKI 350
Query: 448 -----------------------------LCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
C+ G +A+ E+M+ PD + +S
Sbjct: 351 DKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSV 410
Query: 479 LVASVC 484
L+ ++C
Sbjct: 411 LIRNLC 416
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 205/441 (46%), Gaps = 10/441 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y S+I L ++N +E+ + MK C + T + R G+L A++LF
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + SFN L+ + + K+E A F + + + ++L+D LC+
Sbjct: 69 QEMLDRRSHDVI-SFNILVTGLCRAGKIETALEFFRK--MDDRCSPNVITYSVLIDGLCK 125
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A+ + + M +GC PD +Y IL+ GLC + ++ A +L M G
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML----DAGCVP 181
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y +LL LC ++ DA+ ++ + +G + C G ++ A ++
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR-VKDACAM 240
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + + +GG P L Y+ + L ++ E +L + G P +V Y + + L +
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+DEA ++ +G P V +Y+ L+ GLC AG A + M+ GC A+
Sbjct: 301 SNRLDEACRLLLYVKSRGC-PPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD-GCDADV 358
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+DGLC+ GR EA +L M+ P TYN LI+GLC + EA+ +EE
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418
Query: 464 MISQAKLPDISVWSSLVASVC 484
M P ++ L+ +C
Sbjct: 419 MERSNCAPSAVTYNILIHGMC 439
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 202/432 (46%), Gaps = 22/432 (5%)
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M+ CE + + I + + + A LF+++ C ++NTLL + + K
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 131 LEAAHILFLRSCYGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
LE A LF E+ R + S N+L+ LC+ + + AL F++MD + C P+
Sbjct: 61 LERAMALF------QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNV 113
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y +L+ GLC R+++A LL SM R G D++ Y L+ LC + K+ A +
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKAR----GCSPDVITYTILVDGLCKESKVAAAWE 169
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+L ++L G P + L + A +L+ + RG P++ +Y + L
Sbjct: 170 VLREMLDAGC-VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + +L +M KG P L++Y + L K VDE++ ++ V G P
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA-VSGGIKPD 287
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y+ ++ GLC + A L + K GC + Y L+DGLC+ G+ EA +
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYV-KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
E M V TY+ LI GLC G+ EA + L M+ P ++SL+ +C
Sbjct: 347 EVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC-- 404
Query: 487 TADLNVCRKTLE 498
DLN + +E
Sbjct: 405 --DLNHLDEAIE 414
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 172/388 (44%), Gaps = 46/388 (11%)
Query: 26 TALKIFKEAKEK-YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE------- 77
TAL+ F++ ++ PN Y+ +I L ++NR+++ E+++ MK C
Sbjct: 97 TALEFFRKMDDRCSPNV----ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 152
Query: 78 ------CKDSVFATA---------------IRTY-------ARAGQLNEAVSLFKNLSQF 109
CK+S A A + TY RA ++++A++L ++++
Sbjct: 153 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 212
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C ++ TL+ + K +++ A L + N+L++ LC+ + D
Sbjct: 213 GCTPNVVTYGTLIDGLCKVGRVKDA-CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 271
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
++ + + G PD +Y ++ GLC RL+EA LL + +G D+++Y
Sbjct: 272 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL----LYVKSRGCPPDVILYS 327
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ LC GK+ +A + E + G A + C G ++ A L+ +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR-VDEAHLLLARMVR 386
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G PS +Y+++ L + + E ++++EM PS V Y + + + VD
Sbjct: 387 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 446
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGL 377
A +EM+ +P Y+ILL+GL
Sbjct: 447 AALDYFQEMIDNGVIPDHITYSILLEGL 474
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y+++I L ++ ++ E ++ + M GD C+ ++T I +AG+++EA L +
Sbjct: 325 LYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ T ++N+L+K + + L+ A I + + N+L+ +C+ R
Sbjct: 385 VRMGTPPSTMTYNSLIKGLCDLNHLDEA-IELVEEMERSNCAPSAVTYNILIHGMCRMER 443
Query: 167 SD-LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
D AL FQEM G PD +Y IL++GL + L+E HL+ ++ +
Sbjct: 444 VDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 218/481 (45%), Gaps = 44/481 (9%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ + +++ Q ALK F A ++ YRH+ VY SM+ +LS++ +
Sbjct: 173 RSLKPSQVCAVLRSQDDERVALKFFYWADRQW-RYRHDPMVYYSMLEVLSKTKMCQGARR 231
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ MK F + +Y+RAGQL +A+ + + + NT + V
Sbjct: 232 VLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 291
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ ++LE A + FL + + + N ++ C R + A+ + +M +GC PD+
Sbjct: 292 RANRLEKA-LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDK 350
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++R+ E L+ M + G D V Y TL+ L +A+
Sbjct: 351 VSYYTIMGYLCKEKRIVEVRDLMKKM---AKEHGLVRDQVTYNTLIHMLTKHDHADEALW 407
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAID 305
L+ KG + K I C +G E AK LINE L +G P + +Y+A+
Sbjct: 408 FLKDAEEKGFRIDKVGYSAIVHALCKEGRMSE-AKDLINEMLSKGHCPPDVVTYTAVVNG 466
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G + + K+L M T G+ P+ V Y A
Sbjct: 467 FCRLGEVDKAKKLLQIMHTHGYKPNTVSYTA----------------------------- 497
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
LL GLC G S A + MS++ N TY +L+ GL ++G+ EA V
Sbjct: 498 -------LLNGLCRTGKSLEA-REMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDV 549
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+ EM+++ ++P N+L++ LC G+ +EA ++EE +++ ++ +++++ C
Sbjct: 550 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 609
Query: 486 N 486
N
Sbjct: 610 N 610
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 96/247 (38%), Gaps = 30/247 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ N Y +++ L + + E +E+++ + ++ + + G+L+EA
Sbjct: 488 YKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEAC 547
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + N LL+ + ++ + A F+ C + + ++
Sbjct: 548 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR-KFMEECLNKGCAINVVNFTTVIHG 606
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW------ 214
CQ D AL V +M + D +Y L+ L R+ EAT L+ M
Sbjct: 607 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPT 666
Query: 215 ---------RISQKGSGEDIV--------------IYRTLLFALCDQGKIQDAMQILEKI 251
R Q +D+V IY ++ LC GK+++A ++L K+
Sbjct: 667 PVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKV 726
Query: 252 LRKGLKA 258
LR ++
Sbjct: 727 LRTASRS 733
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 220/468 (47%), Gaps = 9/468 (1%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
++ Q AL++F A +K PN+ +Y ++ L S +MK++++ MK CE
Sbjct: 57 LRSQPDDSAALRLFNLASKK-PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCE 115
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFK-NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
S F I +YA+ +E +S+ + +F T +N +L +V + L+ I
Sbjct: 116 MGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ W +K + + N+L+ LC+ + A+ + ++M G PD +++ +M+G
Sbjct: 176 SHAKMSV-WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ L+ A + M + G V ++ C +G+++DA+ ++++ +
Sbjct: 235 IEEGDLDGALRIREQMV----EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P + ++ A +++ L G P + +Y+++ L G + E
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VLD+M T+ P+ V Y ++ L K+ V+EA E+ KG +P V +N L++G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQG 409
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC N VA+ ++M + GC + TY +L+D LC G+ EA +L++M +
Sbjct: 410 LCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TYN LI G C K EA +EM + +++L+ +C
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 204/413 (49%), Gaps = 25/413 (6%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S F I+ RA QL A+ + +++ + V ++F T+++ ++E L+ A L +R
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA--LRIR 247
Query: 141 ------SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILM 193
C V S+N+++ C+ R + AL+ QEM Q G +PD+ +++ L+
Sbjct: 248 EQMVEFGCSWSNV-----SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC + A ++ M Q+G D+ Y +++ LC G++++A+++L++++
Sbjct: 303 NGLCKAGHVKHAIEIMDVML----QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM--AIDLYNEGR 311
+ +P + + + +E A L +G +P + +++++ + L R
Sbjct: 359 RDC-SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ ++ +EMR+KG P Y + +L G +DEAL ++++ + G +V YN
Sbjct: 418 VAM--ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC-ARSVITYN 474
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G C A + A +M G N TY L+DGLC+ R +A++++++M++
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TYN L+ C G +A ++ M S PDI + +L++ +C
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 203/426 (47%), Gaps = 17/426 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++ + E++D M + + + + I + G++ EAV + +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C T ++NTL+ + KE+++E A L R + + + N L+ LC R
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A+ +F+EM +GC PD +Y++L+ LC+ +L+EA ++L M G ++
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM----ELSGCARSVI 471
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKS 282
Y TL+ C K ++A +I +++ G+ R+ + DG +E A
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVS-----RNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ ++ G P +Y+++ G I + ++ M + G P +V Y ++ L
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G V+ A +++ +KG + T YN +++GL + A+ ++M +Q +
Sbjct: 587 KAGRVEVASKLLRSIQMKGINL-TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Query: 403 GETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+Y I+ GLC G + EA L E+L + + P + +L GL ++ + E ++ L
Sbjct: 646 AVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME-ETLVKL 704
Query: 462 EEMISQ 467
M+ Q
Sbjct: 705 VNMVMQ 710
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 201/443 (45%), Gaps = 44/443 (9%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAA---- 134
+ F T ++ Y G L+ A+ + + + +F C +W+ S N ++ KE ++E A
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 135 ----------------HILFLRSCYGWEVKSRIQSLNLLM------DV---------LCQ 163
+ L C VK I+ +++++ DV LC+
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ V +M + C P+ +Y+ L+ LC + ++ EAT L + + KG
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + +L+ LC + AM++ E++ KG + + + + C+ G+ ++ A ++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNM 457
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + + G S+ +Y+ + + E +++ DEM G + V Y + L K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V++A +++++ +++G P YN LL C G+ A ++ M+ GC +
Sbjct: 518 SRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDI 575
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TYG L+ GLC+ GR AS++L + ++ YN +I+GL K EA+ E
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+ Q + P +V +V CN
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCN 658
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L +S R+ + +++DQM + + + + + + R G + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ C ++ TL+ + K ++E A L LRS + + N ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL-LRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 164 CRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCN 198
R++ A+++F+EM Q PD SY I+ +GLCN
Sbjct: 623 KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 226/489 (46%), Gaps = 24/489 (4%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRIT 62
+P ++T L + KQ+ A +F+EA+ K +P Y +MI L + RI
Sbjct: 27 YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTV----VTYNTMIDGLCKCGRIE 82
Query: 63 EMKEVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+ D M ++T I R ++++ L + ++ C ++NTL
Sbjct: 83 NALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTL 142
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF-- 179
+ ++ + + + A L L + + L++ LC+ + A V EM
Sbjct: 143 VNALLGQGRSKEAFSL-LEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIE 201
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD +++ ++ GLC ++R+ +A +++F R ++G ++V Y TL+ L
Sbjct: 202 SGLSPDVITFNSVLDGLCKEQRILDA----HNVFKRALERGCRPNVVTYSTLIDGLSKMA 257
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPS 295
K+ +A+Q+L K++ G +A + + DG +E A ++ + G +P
Sbjct: 258 KMDEALQLLAKMVELGCRA-----NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ + + R+ E +L EM GF PS+V Y L + G DEA+E+++
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+G P Y+ ++ GLC AG A+ Y +KM++ + Y L+DGLC+
Sbjct: 373 YMAARGC-APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G+ EA LE M+ P V T+++LI GLC G+ + M + +PD+
Sbjct: 432 AGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVT 491
Query: 476 WSSLVASVC 484
+++LV +C
Sbjct: 492 YATLVDRLC 500
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 15/446 (3%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+R Y+++I L + + + +++++M G C + T + G+ EA
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSL 154
SL + ++ C +F ++K + KE ++EAA + + S +V +
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT----F 211
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N ++D LC+ +R A +VF+ +GC P+ +Y L+ GL +++EA LL M
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV- 270
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G + V Y T++ L G+++DA+ +L ++ G P + + +
Sbjct: 271 ---ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC-LPDAVTYNTLIDGFFKR 326
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ + A L+ E L G PS+ +Y+ + L GR E ++LD M +G P+ + Y
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 386
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + L K G V EAL E+ P V Y+ L+ GLC AG A +L++M
Sbjct: 387 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI 446
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + + T+ IL++GLC GR + M R P + TY L+ LC +
Sbjct: 447 R-AGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
EA ++M S PD S +++
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMI 531
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 203/433 (46%), Gaps = 55/433 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSR 150
++++A++LFK + ++ L+ + K+ +++ A+ LF + C+
Sbjct: 10 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCH-----PT 64
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + N ++D LC+C R + AL ++ +M G P +Y L+ GLC D +++ LL
Sbjct: 65 VVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R G + V Y TL+ AL QG+ ++A +LE++ G I
Sbjct: 125 EEMAGR----GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 270 PCNDGEDIEGAKSLINEA-LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C +GE IE A +++E +I G+ P + +++++ L E RI++ V +G
Sbjct: 181 LCKEGE-IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P++V Y + L K +DEAL+++ + + G TV Y+ ++ GL G AV
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV-TYSTVVDGLLKVGRMEDAV 298
Query: 388 MYLKKMSKQVGCVANGETYGILVDG----------------------------------- 412
+ L++M + GC+ + TY L+DG
Sbjct: 299 VVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI-SQAKLP 471
LCR GRF EA +L+ M R P TY+ ++ GLC G+ EA+ + E+M + P
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417
Query: 472 DISVWSSLVASVC 484
+ +S+L+ +C
Sbjct: 418 HVIAYSALIDGLC 430
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 7/352 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + K++ L A +FK A E+ R N Y+++I LS+ ++ E
Sbjct: 206 PDVITFNSVLDGLCKEQRILDAHNVFKRALER--GCRPNVVTYSTLIDGLSKMAKMDEAL 263
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M C ++T + + G++ +AV + + + C+ ++NTL+
Sbjct: 264 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 323
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +L A + LR + + L LC+ R D A+ + M +GC P+
Sbjct: 324 FKRQRLREA-VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++ GLC R+ EA M + ++ Y L+ LC GKI +A
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKM---ARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ LE+++R G + P I + D I+ L RG +P + +Y+ +
Sbjct: 440 EFLERMIRAG-RIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
L R+ E + +MR+ G P + L + ++A + +EE
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEE 550
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 6/228 (2%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
++ A +L + + + P + +Y A+ L + R+ E + +E R KG P++V Y
Sbjct: 11 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 70
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L K G ++ AL + ++ + F PTV Y+ L+ GLC L++M+ +
Sbjct: 71 MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR 130
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N TY LV+ L GR EA +LE+M P + T+ ++I+GLC G+
Sbjct: 131 -GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 457 AVMWLEE--MISQAKLPDISVWSSLVASVCCNTADL---NVCRKTLEQ 499
A ++E MI PD+ ++S++ +C L NV ++ LE+
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
++ GLC + A+ K+M + + TYG L+DGL + R EA + EE +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDK-AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM-ISQAKLPDISVWSSLVASVC 484
P V TYN +I GLC G+ A+ ++M I P + +S+L+ +C
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLC 112
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 219/481 (45%), Gaps = 44/481 (9%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ + +++ Q ALK F A ++ YRH+ VY SM+ +LS++ +
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQW-RYRHDPMVYYSMLEVLSKTKLCQGSRR 228
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ MK F+ + +Y+RAGQL +A+ + + + NT + V
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ ++LE A + FL + + + N ++ C R + A+ + ++M +GC PD+
Sbjct: 289 RANRLEKA-LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++R+ E L+ M + G D V Y TL+ L +A+
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKM---AKEHGLVPDQVTYNTLIHMLTKHDHADEALW 404
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAID 305
L+ KG + K I C +G E AK LINE L +G P + +Y+A+
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE-AKDLINEMLSKGHCPPDVVTYTAVVNG 463
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G + + K+L M T G P+ V Y A
Sbjct: 464 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA----------------------------- 494
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
LL G+C G S A + MS++ N TY +++ GL R+G+ EA V
Sbjct: 495 -------LLNGMCRTGKSLEA-REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+ EM+++ ++P N+L++ LC G+ +EA ++EE +++ ++ +++++ C
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 486 N 486
N
Sbjct: 607 N 607
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 132/354 (37%), Gaps = 66/354 (18%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y +++ + + + E +E+++ + ++ + R G+L+EA
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + N LL+ + ++ + A F+ C + + ++
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK-FMEECLNKGCAINVVNFTTVIHG 603
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW------ 214
CQ D AL V +M + D +Y L+ L R+ EAT L+ M
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 215 ---------RISQKGSGEDIV--------------IYRTLLFALCDQGKIQDAMQILEKI 251
R Q G +D+V IY ++ LC GK+++A +L K+
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKV 723
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
LR ++ D + +L+ E ++ G+P L++Y
Sbjct: 724 LRTASRS-----------------DAKTCYALM-EGYLKKGVP-LSAY------------ 752
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
KV M + P + M E L G VDEA +++ + +G P
Sbjct: 753 -----KVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 184/389 (47%), Gaps = 8/389 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++A++ F + + N F L + K+ + +A + + V + SLN
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSA-VSLCNQMDLFGVTHNVYSLN 135
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ LC+ D A+ V +M G PD +++ L+ GLCN+ ++ EA L M W
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW- 194
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
G +++ Y T++ LC G A+++ K+ + K + I C D
Sbjct: 195 ---SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD-R 250
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A ++E + RG P + +Y+ + + G++ E ++ EM + P V +
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K+GMV EA + E M + P YN L+ G C A+ L M
Sbjct: 311 ILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC N +Y IL++G C+ R EA R+L EM ++ P TY+ L++GLC +G+
Sbjct: 370 K-GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA+ +EM S LPD+ +S L+ C
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFC 457
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 198/424 (46%), Gaps = 17/424 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + + A+ Q + AVSL + F + S N L+ + + S H+ F S
Sbjct: 99 FGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS-----HVDFAVSV 153
Query: 143 YGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
G K IQ + N L++ LC + A+ +F EM + G P+ SY+ ++ GLC
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
N T + +F ++ Q ++V Y T++ +LC + +A++ L +++ +G+
Sbjct: 214 ----NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I C+ G+ + A L E + R +P +++ + L EG + E V
Sbjct: 270 DVVTYNTILHGFCSLGQ-LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCV 328
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+ M KG P+ Y A + +DEA++V+ + KG P + YNIL+ G C
Sbjct: 329 SETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC-APNLSSYNILINGYC 387
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A L +MS++ + TY L+ GLC+ GR EA + +EM P +
Sbjct: 388 KSKRMNEAKRLLSEMSEK-NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
Y++L+ G C G EA+ L+EM + P+I +++ L+ + L V ++
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI-AGKLEVAKELFS 505
Query: 499 QLSS 502
+LS+
Sbjct: 506 KLSA 509
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 185/394 (46%), Gaps = 8/394 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I R ++ AVS+ + + +FNTL+ + E K++ A LF +
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S N +++ LC+ + +A+ VF++M+ P+ +Y+ ++ LC DR +NEA
Sbjct: 198 -EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M R G D+V Y T+L C G++ +A ++ ++++ + + + +
Sbjct: 257 EFLSEMVDR----GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G + A+ + +G P+ +Y+A+ ++ E KVL M KG
Sbjct: 313 VDGLCKEGM-VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+L Y + K ++EA ++ E M + P Y+ L++GLC G A
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSE-MSEKNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ K+M G + + Y IL+DG C+ G EA ++L+EM R P + Y +LIR
Sbjct: 431 LNLFKEMCSS-GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G+ GK A ++ + PDI ++ ++
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 199/434 (45%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L +I E + ++M E + T I + G AV +F+ +
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q ++NT++ + K+ + A + FL + + + N ++ C +
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEA-VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F+EM + PD +++IL+ GLC + ++EA + +M ++KG+ +
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM----TEKGAEPNAY 342
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C ++ +A+++L ++ KG AP + I + + + AK L++E
Sbjct: 343 TYNALMDGYCLHNQMDEAIKVLGIMIGKGC-APNLSSYNILINGYCKSKRMNEAKRLLSE 401
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P +YS + L GR E + EM + G P L+ Y L K G
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEAL++++E M + P + +Y IL++G+ AG VA K+S G + TY
Sbjct: 462 LDEALKLLKE-MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD-GIRPDIWTY 519
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++ GL ++G EA +M + P +YNV+I+G A+ ++EM+
Sbjct: 520 NVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVG 579
Query: 467 QAKLPDISVWSSLV 480
+ D S + L+
Sbjct: 580 KRFSADSSTFQMLL 593
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 182/409 (44%), Gaps = 16/409 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I G++ EAV LF + S+NT++ + K A +F R
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF-RK 226
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + + N ++D LC+ R + A+ EM +G PD +Y+ ++ G C+ +
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
LNEAT L M R D V + L+ LC +G + +A + E + KG + P +
Sbjct: 287 LNEATRLFKEMVGR----NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE-PNA 341
Query: 262 RRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + DG ++ A ++ + +G P+L+SY+ + R+ E +
Sbjct: 342 YTYNALM----DGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKR 397
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L EM K P V Y + L + G EAL + +E M +P + Y+ILL G
Sbjct: 398 LLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE-MCSSGLLPDLMAYSILLDGF 456
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G+ A+ LK+M ++ N Y IL+ G+ G+ A + ++ P
Sbjct: 457 CKHGHLDEALKLLKEMHERR-IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ TYNV+I+GL G EA + +M LPD ++ ++ N
Sbjct: 516 IWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 123/331 (37%), Gaps = 77/331 (23%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ N++ E +V+ M G C S + I Y ++ ++NEA L
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+S+ N T +++T LM LCQ
Sbjct: 400 SEMSEKNLTPDTVTYST------------------------------------LMQGLCQ 423
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R AL++F+EM G PD +Y IL+ G C L+EA LL M R +
Sbjct: 424 VGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP---- 479
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+I++Y L+ + GK++ A ++ K+ G++
Sbjct: 480 NIILYTILIRGMFIAGKLEVAKELFSKLSADGIR-------------------------- 513
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P + +Y+ M L EG E + +M GF P Y + +
Sbjct: 514 ----------PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ A+++I +EMV F + +LL
Sbjct: 564 NQDSSTAIQLI-DEMVGKRFSADSSTFQMLL 593
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 10/392 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSL 154
L++A+S F + + T F LL + K +L L + + + + +L
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST--VLSLSTQMDSFGIPPDVYTL 188
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C RR A V ++ GC PD +++ L++GLC + ++ EA HL F
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL----FD 244
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ +G D+V Y TL+ LC G A+++L +++K + + I C D
Sbjct: 245 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDR 304
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A +L +E + +G P + +Y+++ L N +L+EM P++V++
Sbjct: 305 QVTE-AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+GM+ A +V++ M+K P V Y L+ G C AV M
Sbjct: 364 STVVDALCKEGMIAIAHDVVDM-MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ GCV N +Y IL++G C+ R +A +LE+M ++ TYN LI GLC +G+
Sbjct: 423 HK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 481
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A+ EM++ ++PD+ + L+ +C N
Sbjct: 482 QHAIALFHEMVASGQIPDLVTYRILLDYLCKN 513
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 183/406 (45%), Gaps = 8/406 (1%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C+ ++ F T IR G++ EA+ LF ++ TL+ + K AA
Sbjct: 215 GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAA 274
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
I LRS + + + N ++D LC+ R+ A ++F EM +G PD +Y+ L+
Sbjct: 275 -IRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIH 333
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
LCN T LL M ++V++ T++ ALC +G I A +++ ++++
Sbjct: 334 ALCNLCEWKHVTTLLNEMV----NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 389
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G++ + C E E K + + + +G +P++ SY+ + R+ +
Sbjct: 390 GVEPDVVTYTALMDGHCLRSEMDEAVK-VFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+L++M +G V Y + L G + A+ + E MV +P + Y ILL
Sbjct: 449 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE-MVASGQIPDLVTYRILL 507
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
LC + A A++ LK + A+ Y I +DG+CR G A + + +
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGS-NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 566
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYN++I GLC G EA +M D ++++++
Sbjct: 567 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 194/439 (44%), Gaps = 12/439 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ + ++I L +I E + D+ G+ + + T + + G + A+ L
Sbjct: 219 DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ Q NC ++NT++ + K+ ++ A LF + I + N L+ LC
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF-SEMITKGISPDIFTYNSLIHALCN 337
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ EM P+ + ++ LC + + A ++ M R G
Sbjct: 338 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR----GVEP 393
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y L+ C + ++ +A+++ + ++ KG P R + I + + ++ A L
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC-VPNVRSYNILINGYCQIQRMDKAMGL 452
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + ++G I +Y+ + L + GR+ + EM G P LV Y L L K
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ + EA+ V+ + + + VYNI + G+C AG A +S + G +
Sbjct: 513 NHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK-GLQPDV 570
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR--SYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY I++ GLC+ G EA+++ +M S C+ YN +IRG + + A L
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCI--YNTIIRGFLRSNETFGATQLL 628
Query: 462 EEMISQAKLPDISVWSSLV 480
+EM+++ D+S + +V
Sbjct: 629 QEMLAEGFSADVSTTTLIV 647
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 181/447 (40%), Gaps = 45/447 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K + A+++ + +K N R N Y ++I L + ++TE
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK--NCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M + + I + +L + + F+T++ +
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE + AH + + V+ + + LMD C D A+ VF M +GC P+
Sbjct: 371 CKEGMIAIAHDV-VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+IL+ G C +R+++A LL M S +G D V Y TL+ LC G++Q A+
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQM----SLQGLIADTVTYNTLIHGLCHVGRLQHAI 485
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L +E + G IP L +Y +
Sbjct: 486 ------------------------------------ALFHEMVASGQIPDLVTYRILLDY 509
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + E +L + +++Y + + + G ++ A ++ KG P
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG-LQP 568
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
VR YNI++ GLC G A +KM + GC +G Y ++ G R A+++
Sbjct: 569 DVRTYNIMIHGLCKRGLLDEANKLFRKMDEN-GCSRDGCIYNTIIRGFLRSNETFGATQL 627
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIG 452
L+EML + V T +++ L G
Sbjct: 628 LQEMLAEGFSADVSTTTLIVEMLSDDG 654
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 202/416 (48%), Gaps = 26/416 (6%)
Query: 83 FATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +++ RAG A+ +F+ +++ ++NT++ + K + L A LF
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF--- 60
Query: 142 CYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
E+ R + + N L+D LC+ + A + +M +GC P+ +Y +L+ GL
Sbjct: 61 ---EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C R++EA L+ M + +I+ Y + L LC Q +A +++ + L
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLP--NIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175
Query: 257 K-APKSRRHR--ID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ +P + ID LC C I+ A S+ ++ + G +P++ +Y+A+ L ++
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQ---IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG----TFVPTVR 368
+++ M KG P ++ Y + A K VDEALE++ +G VP
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV 292
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+NIL+ G C AGN A ++M + + T+G L+DGLC+ G+ A +L+
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M P V TYN L+ GLC G+ EA +LEEM+S +PD + SLV ++C
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 224/486 (46%), Gaps = 15/486 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + K +++F+E E+ + + Y ++I L ++ + E +
Sbjct: 35 PTIVTYNTIINGLCKSNDLGAGMELFEELVER--GHHPDVVTYNTLIDSLCKAGDLEEAR 92
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC--VNWTQSFNTLLK 123
+ M C ++ I + G+++EA L + +++ +C + ++N+ L
Sbjct: 93 RLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 152
Query: 124 EMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K+S EA ++ V + + L+D LC+C + D A VF +M G
Sbjct: 153 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY 212
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y+ L+ GLC ++ A ++ SM KG D++ Y L+ A C ++
Sbjct: 213 VPNVITYNALVNGLCKADKMERAHAMIESMV----DKGVTPDVITYSVLVDAFCKASRVD 268
Query: 243 DAMQILEKILRKG----LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+A+++L + +G + P I + + E A +L E + + P + +
Sbjct: 269 EALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 328
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ A+ L G++ +LD M G P++V Y A + L K G ++EA + +EE M
Sbjct: 329 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE-M 387
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
V VP Y L+ LC A + A+ + ++ K G + TY ILVDGL + G+
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL-KSFGWDPDTVTYNILVDGLWKSGK 446
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A VLEEM+ + + P T+ GL G + L ++++ LPD + SS
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506
Query: 479 LVASVC 484
++ VC
Sbjct: 507 ILDWVC 512
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 218/475 (45%), Gaps = 10/475 (2%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
TP + +++ K AL F+ A P + H + S++ +L + E ++
Sbjct: 42 TPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFR 101
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
SCE + I + AG L+ A+ L + + + ++ M
Sbjct: 102 SELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG 161
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
L+ A + LRS + + L+ + ++ + A+ + +EM +GC P+ +Y
Sbjct: 162 DLDGA-MDHLRS---MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY 217
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++L+ LC + A ++ M + G +++ + +L+ C +G + DA ++L
Sbjct: 218 NVLVDALCKLSMVGAAQDVVKKMI----EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG 273
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ KG++ + C + +E AK ++ E RG P +YSA+ L
Sbjct: 274 IMVAKGMRPNVVTYSALIDGLCKSQKFLE-AKEVLEEMKTRGVTPDAFTYSALIHGLCKA 332
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
+I E +++L M G P +V+Y + + A K G + EA + ++E M K P V
Sbjct: 333 DKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE-MRKQRKSPDVVT 391
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN ++ GLC G A A + L++M + + + TY +++GLC+ +EA ++L+ M
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY +I GLC G+ EA L+ M P++ +++L++ +C
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 23/484 (4%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
AL++ +E K P+ + P+ +M ++ +D ++ C+ +
Sbjct: 131 ALELLEEMKSAGFAPDAFTHTPIITAMA-------NAGDLDGAMDHLRSMGCDPNVVTYT 183
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
I +ARA +L EA+ L + + + C ++N L+ + K S + AA + + G
Sbjct: 184 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 243
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + N L+D C+ D A + M +G P+ +Y L+ GLC ++ E
Sbjct: 244 G-FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A +L M R G D Y L+ LC KI++A Q+L ++ G
Sbjct: 303 AKEVLEEMKTR----GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C G+ +E K+L E + P + +Y+ + L G+I E +L++M+
Sbjct: 359 SIIHAFCKSGKLLEAQKTL-QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Query: 325 KG-FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P +V Y + L K M+ EA ++++ M K P V Y ++ GLC G
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR-MCKAGCNPDVVTYTTIIDGLCKCGRL 476
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L+ M K+ GC N TY L+ GLC+ + EA RV+EEM P + TYN
Sbjct: 477 EEAEYLLQGM-KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAK--LPDISVWSSLVASVCCNTADL-NVCRKTLEQL 500
++ GLC G+ EA ++ M PD + + ++V ++ ++DL + LEQ+
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM--SSDLVQEAEQLLEQM 593
Query: 501 SSCS 504
S +
Sbjct: 594 KSTT 597
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 55/255 (21%)
Query: 14 LSQIIKKQKSP-----------LTALKIFKEAKEKYPNYRHNGPV------YASMIGILS 56
L ++ K++KSP L L EA+ + +G V Y+++I L
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
+S+ + E ++++D+M C + T I + G+L EA L + + + C
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++ TL+ LC+ R+ D A V +E
Sbjct: 497 TYTTLISG------------------------------------LCKARKVDEAERVMEE 520
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC P+ +Y+ ++ GLC R+ EA L+ M + + D YRT++ AL
Sbjct: 521 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM--KDGRAECSPDAATYRTIVNALM 578
Query: 237 DQGKIQDAMQILEKI 251
+Q+A Q+LE++
Sbjct: 579 SSDLVQEAEQLLEQM 593
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 219/463 (47%), Gaps = 14/463 (3%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + + L AL FK +++H Y +MI L I ++ ++ MK +
Sbjct: 47 LKNEPNILLALHFFKSIANS-NSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGIS 105
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C + +F I Y RAG +A+ F + +F C + +N +L ++ E+K + + +
Sbjct: 106 CNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGI 165
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ + ++ + + N+L+ LC+ R D A + EM ++GC PD SY ++ +C
Sbjct: 166 Y-NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMC 224
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ EA L SM RI + +Y L+ C + K+++ ++ ++ +G+
Sbjct: 225 RLGKVEEAREL--SM--RIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGID 275
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + ++ ++E A +++ + +RG P++ +++++ + GR+ E
Sbjct: 276 -PDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ + M +G P+ V Y + L G + EA+ V ++ G F P Y+ L+ G
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF-PNETTYSTLIDGF 393
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG+ A KM GC+ N Y +VD LCR+ F A ++E M + P
Sbjct: 394 AKAGDLVGASEIWNKMITN-GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
T+N I+GLC GK A+ L +M P+++ ++ ++
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 216/495 (43%), Gaps = 62/495 (12%)
Query: 31 FKEAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ Y N + +G Y ++ L +++R+ ++++ +M C + T
Sbjct: 159 FQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTT 218
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + R G++ EA L + F V +N L+ +E K+E LF
Sbjct: 219 VVSSMCRLGKVEEARELSMRIKSFVPV-----YNALINGFCREHKMEEVFELFNEMAVEG 273
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + + +++ L + ++AL V +M +GC P+ ++ LMKG RL EA
Sbjct: 274 -IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332
Query: 206 THLLYSMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
L W R+ Q+GS + V Y TL+ LC GK+ +A+ + +K+ R G+ P +
Sbjct: 333 LDL-----WNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV-FPNETTY 386
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM---------------------- 302
+ D+ GA + N+ + G +P++ Y+ M
Sbjct: 387 STLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMAN 446
Query: 303 --------AIDLYNEGRIVEGD-----KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ + +G G KVL++MR G P++ Y L LF E
Sbjct: 447 GNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTRE 506
Query: 350 ALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
AL++ IEE +K V YN +L G C AG A+ K+ G + TY
Sbjct: 507 ALQIVGEIEEMEIKSNLV----TYNTILSGFCHAGMFKGALQIAGKLLVG-GTKPDSITY 561
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSY-WPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
++ C+ G A ++++ + + +P V TY L+ G+C+ EAV+ L++MI
Sbjct: 562 NTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMI 621
Query: 466 SQAKLPDISVWSSLV 480
++ P+ + W++LV
Sbjct: 622 NEGICPNRATWNALV 636
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 192/448 (42%), Gaps = 7/448 (1%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S + L +EA+E + PVY ++I +++ E+ E+ ++M + +
Sbjct: 221 SSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVIT 280
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++T I T + G + A+++ + C +F +L+K +L A L+ R
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + N L+ LC + A+ V Q+M+ G +P+ +Y L+ G L
Sbjct: 341 QEGSEPNTV-AYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
A+ + M G ++V+Y ++ LC A+ ++E +
Sbjct: 400 VGASEIWNKMI----TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTIT 455
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C G+ E A ++N+ G P++ +Y+ + L+N R E +++ E+
Sbjct: 456 FNTFIKGLCCSGKT-EWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+LV Y L+ GM AL++ + +V GT P YN ++ C G
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT-KPDSITYNTVIYAYCKQGE 573
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ + +++K+ + TY L+ G+C EA L++M+ P T+N
Sbjct: 574 VKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWN 633
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKL 470
L+RGL S + ++ +++ K+
Sbjct: 634 ALVRGLFSKLGHLGPIHIVDNILANGKV 661
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 213/511 (41%), Gaps = 38/511 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + K+K A K+FKE + + Y ++I L ++ +I +
Sbjct: 54 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR--GLALDTVCYTALIRELLQTGKIPQAS 111
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V M C +T I ++AG++ AV +FK++ ++ L+ +
Sbjct: 112 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ A + + + I + N+L+D LC+ + A F EM GC PD
Sbjct: 172 CKARKMDCALEMLAQMKKAFCTPDTI-TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Query: 186 RESYHILMKGLCNDRRLNEATHLL--------------------------------YSMF 213
+Y+IL+ G C + A+H L ++
Sbjct: 231 VYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALM 290
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+I+ G I Y LL LC G++++A+ +L KI+ G + +
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 350
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
E K L E +RG Y+A+ +L G+I + V M + G P +V
Sbjct: 351 KRSFEAYK-LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT 409
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ L K G + A+ + + +G P VY+ L+ GLC A A+ L +M
Sbjct: 410 LSTMIDGLSKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQM 468
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K C + TY IL+DGLC+ G A +EML P V TYN+LI G C G
Sbjct: 469 KKAF-CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 527
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A ++M S ++ + +L++ +C
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALISGLC 558
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 6/330 (1%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N L++ LC+ R + A+ + +++ GC PD +Y L+ GL ++R EA Y
Sbjct: 21 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA----Y 76
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F ++ +G D V Y L+ L GKI A + + + G P +
Sbjct: 77 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC-VPDVVTLSTMIDG 135
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ I A + RG P+ YSA+ L ++ ++L +M+ P
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + L K G V EA +EM++ P V YNIL+ G C AGN+ A L
Sbjct: 196 TITYNVLIDGLCKSGDV-EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ + GC + TY +VD L ++ + EA ++E++ P + TYN L+ GLC
Sbjct: 255 AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK 314
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G+ EA+ L +++ PD+ ++SL+
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 344
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 190/427 (44%), Gaps = 19/427 (4%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+I E +++++ + C + + + + G+L EA+ L + + C ++
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDLALHVF 174
+L+ + KE + A+ LF E+ R +L+ L+ L Q + A V+
Sbjct: 61 SLIDGLGKEKRSFEAYKLF------KEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M GC PD + ++ GL R+ A + SM R G + V+Y L+
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR----GLAPNEVVYSALIHG 170
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC K+ A+++L + ++K P + + + + D+E A++ +E L G P
Sbjct: 171 LCKARKMDCALEMLAQ-MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP 229
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVL-DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
+ +Y+ + G L E G + Y A + L K+ ++EA+ +
Sbjct: 230 DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+E+ G PT+ YN LL GLC G A+ L+K+ GC + TY L+DGL
Sbjct: 290 MEKITANGC-TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVVTYTSLIDGL 347
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
++ R EA ++ +EM +R Y LIR L GK +A + M S +PD+
Sbjct: 348 GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDV 407
Query: 474 SVWSSLV 480
S+++
Sbjct: 408 VTLSTMI 414
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE A +L+ + G P++A+Y+A+ L GR+ E +L ++ G P +V Y +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L K+ EA ++ +E ++G + TV Y L++ L G A K M+
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTV-CYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GCV + T ++DGL + GR A R+ + M R P Y+ LI GLC K
Sbjct: 121 -GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A+ L +M PD ++ L+ + C + D+ R +++
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGL-CKSGDVEAARAFFDEM 222
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 208/443 (46%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + E ++D+M C + F + G++ EA L +
Sbjct: 214 LYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRM 273
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
C+ ++ LL+ + + + + A + R+ +N++M V+ C
Sbjct: 274 MTQGCMPSVVTYGFLLQGLCRTRQADEACAML----------GRLPEVNVVMLNTVIRGC 323
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y ILM GLC R A +L M +KG
Sbjct: 324 LTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM----EEKGC 379
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+IV Y TLL + C G DA +L+++L KG + I C DG+ ++ A
Sbjct: 380 APNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK-LDQAT 438
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ E +G P + +Y+ M L N + E + + + +G + + Y + AL
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++G E L + E ++ G + + YN L+K LC GN ++ L++M + G
Sbjct: 499 LRNGRWQEGLRLASEMLLHGCQLDVIS-YNGLIKALCKEGNVDRSMALLEEMVTK-GIKP 556
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y +L++ LC+ G+ +A + +EML + P + TYN LI GLC +G + A+ L
Sbjct: 557 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ PDI ++ L++ C
Sbjct: 617 EKLPNENVHPDIVTYNILISWHC 639
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 207/435 (47%), Gaps = 20/435 (4%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R+ E ++D+M C + ++ R Q +EA ++ L + N V N
Sbjct: 262 RVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV----MLN 317
Query: 120 TLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
T+++ + E KL A L+ + G + + ++LM LC+ R A+ + EM+
Sbjct: 318 TVIRGCLTEGKLARATELYEMMGSKG--CPPDVHTYSILMHGLCKLGRFGSAVRMLDEME 375
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC P+ +Y L+ C + ++A +L M KG + Y +++ALC
Sbjct: 376 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQML----AKGFSMNSQGYNGIIYALCKD 431
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG--EDIEGA-KSLINEALIRGGIPS 295
GK+ A ++++++ +G K + + CN+ E+ E ++LI E ++ GI
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI-- 489
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ + L GR EG ++ EM G ++ Y + AL K+G VD ++ ++E
Sbjct: 490 --TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLE 547
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E + KG P YN+L+ LC AG A+ K+M Q G + TY L++GLC+
Sbjct: 548 EMVTKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLCK 605
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G A +LE++ + P + TYN+LI C + +A M L++ IS +P+
Sbjct: 606 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERT 665
Query: 476 WSSLVASVCCNTADL 490
W +V + T +L
Sbjct: 666 WGMMVQNFVRQTVNL 680
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 215/465 (46%), Gaps = 27/465 (5%)
Query: 27 ALKIFKEAKEKY---PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
AL + + ++ P++R Y ++ L+ ++ + + +M D F
Sbjct: 125 ALHLLDQMPRRFAVSPSFRS----YNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTF 180
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL---FL 139
A R R G+ +A++L + +++ CV + T++ +V + + EAA +L L
Sbjct: 181 GVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL 240
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
C + + + N L+ LC R A + M QGC P +Y L++GLC
Sbjct: 241 MGC-----AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRT 295
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R+ +EA +M R+ + ++V+ T++ +GK+ A ++ E + KG P
Sbjct: 296 RQADEAC----AMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCP-P 346
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I + A +++E +G P++ +YS + G + +L
Sbjct: 347 DVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 406
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
D+M KGF + Y + AL KDG +D+A +++E +G P + YN ++ LC+
Sbjct: 407 DQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGC-KPDICTYNTMIYHLCN 465
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + + ++ G VANG TY L+ L R+GR+ E R+ EML+ V
Sbjct: 466 NDLMEEAEHIFRNLIEE-GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVI 524
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+YN LI+ LC G ++ LEEM+++ P+ ++ L+ +C
Sbjct: 525 SYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELC 569
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 11/342 (3%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V +S N+++ L + AL +++ M P ++ + + LC R +
Sbjct: 136 FAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGD 195
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A LL M ++ G D V+Y+T++ AL QG + +A +L+++L G A + +
Sbjct: 196 ALALLRGM----ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFN 251
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ L C G E A+ L++ + +G +PS+ +Y + L + E +L +
Sbjct: 252 DLVLGLCGLGRVREAAR-LVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE 310
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
++VM + +G + A E+ E KG P V Y+IL+ GLC G
Sbjct: 311 V----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGC-PPDVHTYSILMHGLCKLGRFG 365
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
AV L +M ++ GC N TY L+ CR+G + +A +L++ML + + + YN +
Sbjct: 366 SAVRMLDEMEEK-GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
I LC GK +A ++EM SQ PDI +++++ +C N
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNN 466
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 19/277 (6%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
+NG +YA L + ++ + ++ +MK C+ + T I + EA +
Sbjct: 421 YNGIIYA-----LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHI 475
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLLM 158
F+NL + V ++NTL+ +++ + L A + L C + + S N L+
Sbjct: 476 FRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC-----QLDVISYNGLI 530
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC+ D ++ + +EM +G P+ SY++L+ LC ++ +A L M
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML----N 586
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G DIV Y TL+ LC G A+ +LEK+ + + P + I + ++
Sbjct: 587 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVH-PDIVTYNILISWHCKVRLLD 645
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
A L+++A+ G +P+ ++ M + + +EG
Sbjct: 646 DAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 215/476 (45%), Gaps = 20/476 (4%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG 73
LS ++ +K AL++FKE + N Y +I + ++ + V MK
Sbjct: 4 LSGLVSARKHD-QALRLFKEVLAGL--FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
S T + GQ++ A+ LF+ + + + S N LL+ ++
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLC----QCRRSDLALHVFQEMDFQGCYPDRESY 189
A + L+ + NL++ LC R + A+ F+EM G PD ESY
Sbjct: 121 A-LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
HIL+ L + R+ EA H L+S DI+ Y L+ C G+ +A +++
Sbjct: 180 HILLSALSDSGRMAEA-HALFSAMT------CSPDIMTYNVLMDGYCKIGQTYEAQSLMK 232
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+IL+ G + I C C + +E A + + + +P+ +++ +
Sbjct: 233 EILKAGYEPNVFTYSIIINCYCKL-DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 291
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD-GMVDEALEVIEEEMVKGTFVPTVR 368
G + + K+ EM G ++V Y + +L K G V A+++ + G PT+
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG-LTPTIV 350
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L++G CDA + A+ Y +M + C N TY IL+DGLC+ R EA++ LE+
Sbjct: 351 TYNSLIQGFCDARRLSEAMQYFDEMEGK--CAPNVITYSILIDGLCKVRRMKEAAKTLED 408
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M Y P V TY LI G C G+ A+++ E+M P+ ++++L+ +C
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC 464
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 182/392 (46%), Gaps = 14/392 (3%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
A +L +A+ FK + +S++ LL + ++ AH LF I
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF----SAMTCSPDIM 209
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N+LMD C+ ++ A + +E+ G P+ +Y I++ C ++ EA + +
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEA----WEV 265
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F ++ + + V + TL+ C G ++DA+++ ++ + G KA + + C
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ A L N+ G P++ +Y+++ + R+ E + DEM K P+++
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVI 384
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L K + EA + +E+ G + PTV Y L+ G C G A+++ +K
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHG-YTPTVVTYGGLINGFCKCGELKSALLFFEK 443
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M K GC N + L+DGLC+ R + R+L M P V TYN LI GLCS
Sbjct: 444 M-KLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 502
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +A + M A P+++ ++ L+ +C
Sbjct: 503 RVEDAQRLFDGM---ACAPNVTTFNFLIRGLC 531
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 183/405 (45%), Gaps = 24/405 (5%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+NR+ + E +MK E + + + +G++ EA +LF S C +
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMT 210
Query: 118 FNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+N L+ K + A L L++ Y + + + +++++ C+ + + A VF
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGY----EPNVFTYSIIINCYCKLDKVEEAWEVF 266
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M C P+ +++ L+ G C L +A L F + + G IV Y TL+ +
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL----FAEMEKIGCKATIVTYNTLIDS 322
Query: 235 LCDQ-GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG- 292
LC + G + A+ + K+ GL + + C D + A +E + G
Sbjct: 323 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC-DARRLSEAMQYFDE--MEGKC 379
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++ +YS + L R+ E K L++M+ G+ P++V Y + K G + AL
Sbjct: 380 APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
E+ + G P ++N L+ GLC A + + L M + GC + TY L+ G
Sbjct: 440 FFEKMKLAGC-APNTVIFNTLIDGLCKAERANDGLRLLCHMHAE-GCKPDVITYNCLISG 497
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
LC R +A R+ + M + P V T+N LIRGLC+ K EA
Sbjct: 498 LCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A L+ L D+AL + +E ++ G F P YN+L++G C G AV M K
Sbjct: 2 ALLSGLVSARKHDQALRLFKE-VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-K 59
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + N T L+ GLC G+ A ++ EM + P ++N+L+RG G+
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
+A+ L++M + ++ ++ +C N + +E
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAME 162
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK-YPNYRHNGPVYASMIGILSESNRITEM 64
P ++T L Q + A++ F E + K PN Y+ +I L + R+ E
Sbjct: 347 PTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNV----ITYSILIDGLCKVRRMKEA 402
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ MK + I + + G+L A+ F+ + C T FNTL+
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLI-- 460
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
D LC+ R++ L + M +GC P
Sbjct: 461 ----------------------------------DGLCKAERANDGLRLLCHMHAEGCKP 486
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y+ L+ GLC+ R+ +A L M ++ + L+ LC Q K+++A
Sbjct: 487 DVITYNCLISGLCSANRVEDAQRLFDGM-------ACAPNVTTFNFLIRGLCAQKKVEEA 539
Query: 245 MQILE 249
IL+
Sbjct: 540 RNILD 544
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 230/477 (48%), Gaps = 17/477 (3%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
LL ++++ ++++ + L AL+ F+ ++H Y MI L ++ + + +
Sbjct: 37 LLHESHVAHALRREPNVLYALQHFQYLTNTLA-FKHTPLTYHVMIEKLGRNSELDALHYI 95
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ QMK + C F + +Y +G + A+ +F + +F C + +N LL ++
Sbjct: 96 LHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLG 155
Query: 128 ESKLEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
ES H++ + G ++ + + N+L+ LC+ + D A + EM +GC PD
Sbjct: 156 ESG-NKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPD 214
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV-IYRTLLFALCDQGKIQDA 244
SY ++ +C D R+ EA ++++ E +V + L+ LC +G++ +
Sbjct: 215 GVSYTTVVAAMCEDGRVEEAR--------EVARRFGAEGVVSVCNALICGLCREGRVGEV 266
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++++++ G+ P + + +D ++E A +++ + + RG P++ ++S++
Sbjct: 267 FGLMDEMVGNGVD-PNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ GR+ EG + M +G P++V+Y L L G + EA++V M K F
Sbjct: 326 GYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGR-MEKDCFC 384
Query: 365 -PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+ L+ G AG+ A KM G N Y +VD LC++ F +A
Sbjct: 385 RPNVTTYSTLVHGFVKAGDLQGASEVWNKMV-NCGVRPNVVVYTSMVDVLCKNSMFDQAY 443
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
R+++ M P V T+N I+GLC G+ A+ +++M LPD ++ L+
Sbjct: 444 RLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELL 500
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/525 (20%), Positives = 196/525 (37%), Gaps = 110/525 (20%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMI-GILSES-NRITEMKEVIDQMKGDSCECKDSVFA 84
ALK+F KE + +Y ++ +L ES N+ + V + M+G+ E +
Sbjct: 127 ALKMFYRIKEF--GCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYN 184
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR---- 140
++ + G+L+ A L +S+ CV S+ T++ M ++ ++E A + R
Sbjct: 185 VLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAE 244
Query: 141 ---------------------------SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
G V + S + ++ L +LAL V
Sbjct: 245 GVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAV 304
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI-SQKGSGEDIVIYRTLL 232
+M +GC P+ ++ LMKG R+ E L WR+ +G ++V+Y TLL
Sbjct: 305 LGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGL-----WRVMVLEGVRPNVVVYNTLL 359
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC G + +A+ + ++ + P + + D++GA + N+ + G
Sbjct: 360 NGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGV 419
Query: 293 IPSLASYSAM---------------------------AIDLYNE--------GRIVEGDK 317
P++ Y++M + +N GR++ +
Sbjct: 420 RPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMR 479
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE--------------------- 356
V+D+M+ G P Y L LF + EA E+I E
Sbjct: 480 VVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFS 539
Query: 357 -------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
M+ P N+++ G A+ +L +++ +
Sbjct: 540 SHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDI 599
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ L+ G+C EA L +ML + +P + T++VL+RG
Sbjct: 600 IAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 163/383 (42%), Gaps = 6/383 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I LS+ + V+ +M C F++ ++ Y G++ E V L++ +
Sbjct: 285 YSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMV 344
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+NTLL + L A + R + + + + L+ +
Sbjct: 345 LEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDL 404
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A V+ +M G P+ Y ++ LC + ++A L+ +M + G +V
Sbjct: 405 QGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNM----ATDGCPPTVVT 460
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ T + LC G++ AM++++++ R G P +R + L +++ A LI E
Sbjct: 461 FNTFIKGLCCGGRVLWAMRVVDQMQRYGC-LPDTRTYNELLDGLFSVNELKEACELIREL 519
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R +L +Y+ + + G+ +VL M G P + + A K G V
Sbjct: 520 EERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKV 579
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A++ ++ P + + LL G+C++ A++YL KM + G N T+
Sbjct: 580 RTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNK-GIFPNIATWD 638
Query: 408 ILVDGLCRDGRFLEASRVLEEML 430
+LV G + + R+L+++L
Sbjct: 639 VLVRGFFKKLGHMGPIRILDDIL 661
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 10/300 (3%)
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+YH++++ L + L+ ++L+ M +I + +D I +L + + G A+++
Sbjct: 75 TYHVMIEKLGRNSELDALHYILHQM--KIERIPCSQDSFI--CVLNSYKNSGLGDRALKM 130
Query: 248 LEKILRKGLKAP-KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+I G K K H +D G ++ G P++ +Y+ + L
Sbjct: 131 FYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKAL 190
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G++ K+L EM +G P V Y +AA+ +DG V+EA EV +G
Sbjct: 191 CKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV---- 246
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V V N L+ GLC G + +M G N +Y ++ L G A VL
Sbjct: 247 VSVCNALICGLCREGRVGEVFGLMDEMVGN-GVDPNVVSYSSVISWLSDVGEVELALAVL 305
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+M+ R P V T++ L++G G+ E V M+ + P++ V+++L+ +CC+
Sbjct: 306 GKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCS 365
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 44/439 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L + I + E++D M E + + I + G+++EAV + ++
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C T ++NTL+ + KE+ +EAA L R V + + N L+ LC
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATEL-ARVLTSKGVLPDVCTFNSLIQGLCLTSN 422
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++A+ +F+EM +GC PD +Y IL++ LC++RRL EA LL M G ++V
Sbjct: 423 REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM----ELSGCARNVV 478
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y TL+ LC ++ DA I +++ G+ SR
Sbjct: 479 VYNTLIDGLCKNNRVGDAEDIFDQMEMLGV----SR------------------------ 510
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
S +Y+ + L R+ E +++D+M +G P Y L + G
Sbjct: 511 --------SSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A ++++ + G P + Y L+ GLC AG VA L+ + + G V + Y
Sbjct: 563 IKRAADIVQNMTLNGC-EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK-GMVLTPQAY 620
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ LC+ R EA R+ EM+ + P V TY ++ RGLC+ G EAV + EM+
Sbjct: 621 NPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEML 680
Query: 466 SQAKLPDISVWSSLVASVC 484
+ LP+ + L +C
Sbjct: 681 EKGILPEFPSFGFLAEGLC 699
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 228/517 (44%), Gaps = 48/517 (9%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P +P+ L ++++Q +AL +F+ A + PNY + V+ ++ L+ + M
Sbjct: 53 LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQ-PNYSAHPSVFHELLRQLARAGSFDSM 111
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS-LFKNLSQ-FNCVNWTQSFNTLL 122
++ QM +S F + TYA + L+ ++ LF + + F T+ +N L
Sbjct: 112 LTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVAL 171
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+VK +KL+ L + V + + N+L+ LC+ + A+ + ++M G
Sbjct: 172 SLLVKANKLKLVETLHSKMV-ADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230
Query: 183 YPDRESYHILMKG-----------------------------------LCNDRRLNEATH 207
PD +++ LM+G LC + R+ EA
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+Y ++G D V + L+ LC G I+ +++++ +L KG + + +
Sbjct: 291 FIYE------EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C GE I+ A +++ + R P+ +Y+ + L E + ++ + +KG
Sbjct: 345 SGLCKLGE-IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P + + + + L + A+E+ EE KG P Y+IL++ LC A+
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC-DPDEFTYSILIESLCSERRLKEAL 462
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M LK+M GC N Y L+DGLC++ R +A + ++M + TYN LI G
Sbjct: 463 MLLKEMELS-GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLING 521
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC + EA +++MI + PD +++++ C
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFC 558
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 198/452 (43%), Gaps = 14/452 (3%)
Query: 36 EKYPNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
E PNY R + + +++ E + + + M CE + +
Sbjct: 223 EDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKE 282
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQ 152
G++ EA+ F C + +FN L+ + + + + ++ G+E+ +
Sbjct: 283 GRIEEALRFIYEEEGF-CPDQV-TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD--VY 338
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L+ LC+ D A+ + M + C P+ +Y+ L+ LC + + AT L +
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ KG D+ + +L+ LC + AM++ E++ KG P + I +
Sbjct: 399 ----TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD-PDEFTYSILIESLC 453
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
++ A L+ E + G ++ Y+ + L R+ + + + D+M G S V
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L K V+EA +++++ +++G P Y +LK C G+ A ++
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEG-LKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M+ GC + TYG L+ GLC+ GR AS++L + ++ + YN +I+ LC
Sbjct: 573 MTLN-GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRK 631
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA+ EM+ + PD+ + + +C
Sbjct: 632 RTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 9/319 (2%)
Query: 47 VYASMI-GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
+ S+I G+ SNR M E+ ++MK C+ + ++ I + +L EA+ L K
Sbjct: 409 TFNSLIQGLCLTSNREIAM-ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C +NTL+ + K +++ A +F + +S + + N L++ LC+ +
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV-TYNTLINGLCKSK 526
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + A + +M +G PD+ +Y ++K C + A ++ +M + G DI
Sbjct: 527 RVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM----TLNGCEPDI 582
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ LC G++ A ++L + KG+ + + C E A L
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKE-AMRLFR 641
Query: 286 EALIRGGIPSLASYSAMAIDLYNEG-RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E + +G P + +Y + L N G I E EM KG P + L
Sbjct: 642 EMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSL 701
Query: 345 GMVDEALEVIEEEMVKGTF 363
M D +++I M KG F
Sbjct: 702 SMEDTLIQLINMVMEKGRF 720
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 202/436 (46%), Gaps = 48/436 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMIG+L ++NR+ E E+ +Q++ + + T I Y AG+ +EA L +
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N +L + K+ ++E A +F + + + N+L+D+LC+ +
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE--MKRDAVPNVPTYNILIDMLCREGK 419
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL + +M+ G +P+ + +I++ LC ++L EA S+F + K + V
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC----SIFEGMDDKVCTPNAV 475
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ L G++ DA + EK+L C
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLD-----------------C--------------- 503
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P Y+++ + GR +G K+ EM G P L + + +FK G
Sbjct: 504 ----GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 559
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGE 404
++ + E G F+P R Y+IL+ GL AG N + Y K+ GCV +
Sbjct: 560 TEKGRALFREINAHG-FIPDARSYSILIHGLVKAGLANETYELFY---AMKEQGCVLDTH 615
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y ++DG C+ G+ +A ++LEEM ++ + P V TY +I GL I + EA M EE
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675
Query: 465 ISQAKLPDISVWSSLV 480
S ++ V+SSL+
Sbjct: 676 KSNGIKLNVVVYSSLI 691
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 184/430 (42%), Gaps = 43/430 (10%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI L ++ ++ E + + M C F++ I + G++++A SL++ +
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 504
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
V + +L++ K + E H ++ + + +N MD + + ++
Sbjct: 505 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG-CSPDLTLINTYMDCVFKAGETEKG 563
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+F+E++ G PD SY IL+ GL NE Y +F+ + ++G D Y
Sbjct: 564 RALFREINAHGFIPDARSYSILIHGLVKAGLANET----YELFYAMKEQGCVLDTHAYNA 619
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ C GK+ A Q+LE E ++
Sbjct: 620 VIDGFCKSGKVNKAYQLLE------------------------------------EMKVK 643
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +Y ++ L R+ E + +E ++ G ++V+Y + + K G +DEA
Sbjct: 644 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EE M KG P V +N LL L A A++ + M K + C N TY IL+
Sbjct: 704 YLIMEELMQKG-LTPNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILI 761
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+GLCR +F +A +EM P TY +I GL G EA + +
Sbjct: 762 NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI 821
Query: 471 PDISVWSSLV 480
PD + +++++
Sbjct: 822 PDSASYNAMI 831
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 201/473 (42%), Gaps = 47/473 (9%)
Query: 11 PTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQ 70
P + ++K+ K TA+ F+ A EK H Y S++ +++ + ++ ++++
Sbjct: 92 PELVIGVLKRLKDANTAVNYFQWA-EKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEE 150
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M ++ + ++ +L EA + + + +F ++ L+ + + +
Sbjct: 151 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVRE 210
Query: 131 LEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+ ILF + G+EV + L+ V + R D AL + EM D Y
Sbjct: 211 PDPMLILFHQMQELGYEV--NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLY 268
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ + +++ + + F + G D V Y +++ LC ++ +A+++ E
Sbjct: 269 NVCIDCFGKAGKVD----MSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ ++R+ +P +Y+ M + +
Sbjct: 325 QL-------EQNRK-----------------------------VPCAYAYNTMIMGYGSA 348
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G+ E +L+ + KG PS++ Y L L K V+EAL + EE +K VP V
Sbjct: 349 GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE--MKRDAVPNVPT 406
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YNIL+ LC G A+ M ++ G N T I++D LC+ + EA + E M
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDM-ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ P T++ LI GL G+ +A E+M+ +P V++SL+ S
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 45/357 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY S+I + R + ++ +M C ++ T + +AG+ + +LF+ +
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 570
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI---QSLNLLMDVLCQ 163
+ + +S++ L+ +VK + LF Y + + + + N ++D C+
Sbjct: 571 NAHGFIPDARSYSILIHGLVKAGLANETYELF----YAMKEQGCVLDTHAYNAVIDGFCK 626
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A + +EM +G P +Y ++ GL RL+EA Y +F G
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSNGIKL 682
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------KSRRHRIDLCPC 271
++V+Y +L+ G+I +A I+E++++KGL K+ L
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742
Query: 272 NDGEDIEGAKSLINEALIRGGI----------------------PSLASYSAMAIDLYNE 309
+D++ + I +++ G+ P+ +Y+ M L
Sbjct: 743 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 802
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G I+E + + G P Y A + L +A + EE +KG + T
Sbjct: 803 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHT 859
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L+EM GF PS + +A K + EA ++I+ M K F P Y IL+
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQT-MRKFKFRPAFSAYTILIG 203
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L + ++ +M +++G N + L+ R+GR A +L+EM S
Sbjct: 204 ALSEVREPDPMLILFHQM-QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLD 262
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRK 495
+ YNV I GK + + EM S +PD ++S++ V C L+ +
Sbjct: 263 ADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIG-VLCKANRLDEAVE 321
Query: 496 TLEQL 500
EQL
Sbjct: 322 LFEQL 326
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 185/397 (46%), Gaps = 8/397 (2%)
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
Y L++A+S F + + F +L + K + + R + +
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTV-LSLSRKMDSFGIPH 107
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ +LN+L++ C R + A V ++ GC PD S+ L+KGLC + ++ EA HL
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M W +G D+VIY TL+ LC G A+++L + + + +
Sbjct: 168 DKMIW----EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHS 223
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C D + + A +L +E + +G P++ + +++ L N G + +L+EM P
Sbjct: 224 LCKDRQQTQ-AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + + AL K+GMV +A +V++ M + P V Y L+ G C AV
Sbjct: 283 NAISLTTVVDALCKEGMVAQAHDVVDM-MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M + GC N +Y L++G C+ R +A + EEM + P TYN LI GLC
Sbjct: 342 FDMMVHK-GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G+ +A+ EM++ ++PD+ + L+ +C N
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKN 437
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 201/448 (44%), Gaps = 13/448 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVID-QMKGDSCECKDSVFA--TAIRTYARAGQLN 97
+ H P IL+ ++ V+ K DS +V+ I ++ ++N
Sbjct: 67 HMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVN 126
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE-VKSRIQSLNL 156
A S+ + + C T SF TL+K + E ++ A LF + WE + +
Sbjct: 127 FAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI--WEGFQPDVVIYAT 184
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ LC+ + A+ + + M+ C PD Y L+ LC DR+ +A +++F +
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA----FNLFSEM 240
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
KG +IV +L++ALC+ G+ + +L +++ + + C +G
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM- 299
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A +++ G P + +Y+A+ + E KV D M KG P++ Y
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K +D+A+ + EE M + +P YN L+ GLC G A+ ++M
Sbjct: 360 LINGYCKIERMDKAMYLFEE-MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA- 417
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + + TY IL+D LC++ +A +L+ + + P ++ Y ++I G+C G+ +
Sbjct: 418 CGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELED 477
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A + S+ P++ ++ + +C
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLC 505
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 202/491 (41%), Gaps = 49/491 (9%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F K + ++ + +YA++I L ++ + ++ M+ +C+ V+ T
Sbjct: 163 ALHLFD--KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL 220
Query: 87 IRTYARAGQLNEAVSLFK---------NLSQFNCVNWT-------QSFNTLLKEMVKESK 130
I + + Q +A +LF N+ N + + + NTLL EMV +SK
Sbjct: 221 IHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV-DSK 279
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ I SL ++D LC+ A V M G PD +Y
Sbjct: 280 IMPNAI----------------SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYT 323
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ G C ++EA +F + KG ++ Y TL+ C ++ AM + E+
Sbjct: 324 ALIDGHCLRSEMDEAV----KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEE 379
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ R+ L + + C+ G ++ A +L E + G IP L +Y + L
Sbjct: 380 MCRQKLIPNTVTYNTLIHGLCHVGR-LQDAIALFREMVACGQIPDLVTYRILLDYLCKNC 438
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ + +L + P + +Y + + + G +++A ++ KG P V Y
Sbjct: 439 HLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG-LKPNVWTY 497
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI+ GLC G A +M + C A+G TY + G R+ A ++LEEML
Sbjct: 498 NIMTHGLCKRGLLDEATKLFMEMDEN-ACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
R + V T +L+ L G LE+M ++ + +V C D+
Sbjct: 557 ARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRI-------QVKDTVFCKEDDI 609
Query: 491 NVCRKTLEQLS 501
N K + L+
Sbjct: 610 NALGKVISDLN 620
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 206/443 (46%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + E ++D+M C + F + G + EA L +
Sbjct: 217 LYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRM 276
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
C ++ LL+ + + + + A+ + R+ +N++M V+ C
Sbjct: 277 MMHGCTPSVVTYGFLLRGLCRTRQADEAYAML----------GRVPEVNVVMLNTVIRGC 326
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y+ILM GLC R A +L M +KG
Sbjct: 327 LAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM----EEKGC 382
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+IV Y TLL + C G DA +L+++ KG + I DG+ ++ A
Sbjct: 383 APNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK-LDEAM 441
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ E +G P + +Y+ + L N ++ E + + + +G + + Y + AL
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G E L + E ++ G + V YN L+K LC GN ++M L++M + G
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVS-YNGLIKALCKEGNVDRSMMLLEEMMTK-GIKP 559
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y +L++ LC+ G+ +A + +EML + P + TYN LI GLC +G + A+ L
Sbjct: 560 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 619
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ PDI ++ L++ C
Sbjct: 620 EKLPNENVHPDIVTYNILISWHC 642
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 205/422 (48%), Gaps = 14/422 (3%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ E ++D+M C + +R R Q +EA ++ + + N V N
Sbjct: 265 HVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV----MLN 320
Query: 120 TLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
T+++ + E KL A L+ + G + + N+LM LC+ R A+ + EM+
Sbjct: 321 TVIRGCLAEGKLARATELYEMMGSKG--CPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC P+ +Y L+ C + ++A +M ++S KG + Y +++AL
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDAR----AMLDQMSAKGFSMNSQGYNGIIYALGKD 434
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
GK+ +AM++++++ +G K + I CN+ + ++ A+ + L G + + +
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN-DQMDEAEHIFGNLLEEGVVANGIT 493
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L + GR EG ++ +EM G +V Y + AL K+G VD ++ ++EE M
Sbjct: 494 YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM 553
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG P YN+L+ LC AG A+ K+M Q G + TY L++GLC+ G
Sbjct: 554 TKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLCKVGW 611
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
A +LE++ + P + TYN+LI C + +A M L++ +S +P+ W
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671
Query: 479 LV 480
+V
Sbjct: 672 MV 673
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 218/500 (43%), Gaps = 62/500 (12%)
Query: 27 ALKIFKEAKEKY---PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
AL + + ++ P++R Y +++ L+ ++ + + +M D F
Sbjct: 128 ALHLLDQMPRRFAVTPSFRS----YNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTF 183
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL---FL 139
A R R G+ +A++L + +++ CV + T++ +V + + EAA +L L
Sbjct: 184 GVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL 243
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
C + + + N ++ LC A + M GC P +Y L++GLC
Sbjct: 244 MGC-----AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT 298
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R+ +EA Y+M R+ + ++V+ T++ +GK+ A ++ E + KG P
Sbjct: 299 RQADEA----YAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCP-P 349
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I + A +++E +G P++ +YS + G + +L
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
D+M KGF + Y + AL KDG +DEA+ +++E +G P + YN ++ LC+
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGC-KPDICTYNTIIYHLCN 468
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV-------------- 425
A + ++ G VANG TY L+ L GR+ E R+
Sbjct: 469 NDQMDEAEHIFGNLLEE-GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVV 527
Query: 426 ---------------------LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
LEEM+ + P +YN+LI LC GK +A+ +EM
Sbjct: 528 SYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 587
Query: 465 ISQAKLPDISVWSSLVASVC 484
++Q PDI +++L+ +C
Sbjct: 588 LNQGLTPDIVTYNTLINGLC 607
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 162/342 (47%), Gaps = 11/342 (3%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V +S N ++ L + AL +++ M P ++ + + LC R +
Sbjct: 139 FAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARD 198
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A LL M ++ G D V+Y+T++ AL QG + +A +L+++L G A + +
Sbjct: 199 ALALLRGM----ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFN 254
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ L C G E A+ L++ ++ G PS+ +Y + L + E +L +
Sbjct: 255 DVVLGLCGLGHVREAAR-LVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPE 313
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
++VM + +G + A E+ E KG P V YNIL+ GLC G
Sbjct: 314 V----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGC-PPDVHTYNILMHGLCKLGRCG 368
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
AV L +M ++ GC N TY L+ CR+G + +A +L++M + + + YN +
Sbjct: 369 SAVRMLDEMEEK-GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
I L GK EA+ ++EM SQ PDI +++++ +C N
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 213/469 (45%), Gaps = 59/469 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L ++ R+ E ++ +M+ CE +++ + ++ + Q E++SLF +
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
+ CV +++ ++ + K ++ A +F R G E + + L+ L +
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME--PLLGNYKTLLSSLVKDE 682
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D AL +F E+ PD Y+I++ GL R++EA L+ SM + D+
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM----KNQNILPDL 738
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +LL L G++++A + K+ +G H D+ D+ G ++
Sbjct: 739 FTYTSLLDGLGKSGRLEEAFNMFTKMTEEG--------HEPDVVAYTSLMDVLGKGGKLS 790
Query: 286 EALI-------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
ALI + +P + +YS++ L EGR+ E + +KG P++ +Y + +
Sbjct: 791 HALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI 850
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ K GMVD ALE+ EE M + P + YN LL GL AG VA L++M K VG
Sbjct: 851 DSFGKKGMVDRALELFEE-MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK-VG 908
Query: 399 CVANGETYGILVDGLCRDG-----------------------------------RFLEAS 423
CV + TY IL+DG+ + G + LEA
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ + M Y P V TYNVLI L GK +EA M EM + +PD
Sbjct: 969 ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 210/454 (46%), Gaps = 19/454 (4%)
Query: 37 KYPN--YRHNGPV-YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
+YP+ ++ G + Y +++ + + E ++++ MK C + T + +A
Sbjct: 517 EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKA 576
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKS 149
G+L+EAVSL + + + C ++++L+ K + E + LF + C +
Sbjct: 577 GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCV-----A 631
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + +L+++ LC+ D AL VF M +G P +Y L+ L D +++ A +
Sbjct: 632 DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQI- 690
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
F + + D +Y ++ L ++ +A ++++ + + + P + L
Sbjct: 691 ---FNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI-LPDLFTYTSLLD 746
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+E A ++ + G P + +Y+++ L G++ + M K P
Sbjct: 747 GLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP 806
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+V Y + + +L K+G V+EA E + KG P V VY+ L+ G A+
Sbjct: 807 DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC-TPNVGVYSSLIDSFGKKGMVDRALEL 865
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
++M ++ C N TY L+ GL + GR A ++LEEM P + TYN+LI G+
Sbjct: 866 FEEMQRRQ-CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG 924
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+G EA + + M + +PD+ ++SL+ S+
Sbjct: 925 KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 217/514 (42%), Gaps = 41/514 (7%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P + ++ QK A F A ++ Y H Y MI L+ + + +++
Sbjct: 147 LNPGLVCDVVVNQKDLHLAKCFFTWAGQQ-DGYSHTVGTYTLMIKRLAGAQETDAVVQIL 205
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
M + + + +RT+ ++ A+ +F + F C T +N +L+ +VK
Sbjct: 206 TAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKG 265
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+A I+F + + ++ Q+ + + + R D A QEM G P +
Sbjct: 266 GFYHSAVIVFGKLGQ-FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHT 324
Query: 189 YHILMKGLCNDRRLNEATHLLYSM-FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+ +L+ L ++EA M R S ++V Y TL+ L G++++A ++
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSP-----NVVTYTTLVNGLAKAGRLEEACEV 379
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ +++ +P + + + + + A L E RG +P+L +Y+ M L
Sbjct: 380 FVE-MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLG 438
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
GR E ++ +++ +G P + Y + L K G +D+ L +I+E + KG
Sbjct: 439 KAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIIS 498
Query: 368 R------------------------------VYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
R YN L+ G+ AV L+ M K
Sbjct: 499 RDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHE 558
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C+ TY LVDGL + GR EA +L EM + P V TY+ L+ ++ E+
Sbjct: 559 -CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEES 617
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+ +EM+ + + D+S + SLV + C + D++
Sbjct: 618 LSLFDEMVRKGCVADVSTY-SLVINCLCKSDDVD 650
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T LS ++K +K AL+IF E +E + + VY M+ L +SNR+ E +++D M
Sbjct: 673 TLLSSLVKDEKIDF-ALQIFNELQES--SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
K + + + + ++G+L EA ++F +++ ++ +L+ + K KL
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
A I +F+ M + C PD +Y
Sbjct: 790 SHALI------------------------------------IFRAMAKKRCVPDVVTYSS 813
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ L + R+ EA Y F KG ++ +Y +L+ + +G + A+++ E++
Sbjct: 814 LIDSLGKEGRVEEA----YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
R+ P + L + A+ L+ E G +P L +Y+ + + G
Sbjct: 870 QRRQC-PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM 928
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE--EEMVKGTFVPTVRV 369
+ E + M+ KG P ++ + + + +L G VD+ LE E + M + + P+V
Sbjct: 929 VDEAESYFKRMKEKGIVPDVITFTSLIESL---GKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
YN+L+ L AG A M +M K GC+ +G T GI+
Sbjct: 986 YNVLIDILGRAGKVHEAAMIFHEM-KVKGCMPDGITIGIM 1024
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 222/475 (46%), Gaps = 13/475 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I +Q++ AL+IF A + +P + HN Y S++ LS + +
Sbjct: 41 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 100
Query: 65 KEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++ ++ +C +++F +R Y AG+ ++ +F + F +S NTLL
Sbjct: 101 ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 160
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+++ + + H +F S + + I + NLL+ LC+ + A V E+ G
Sbjct: 161 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGL 220
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y ++ G + A +L M +G D + Y L+ C G+
Sbjct: 221 VPNLVTYTTILGGYVARGDMESAKRVLEEML----DRGWYPDAITYTVLMDGYCKLGRFS 276
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A +++ + + ++ + + C + + E A+++ +E L R +P +S
Sbjct: 277 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE-ARNMFDEMLDRSFMPD-SSLCCK 334
Query: 303 AID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
ID L + ++ E + +M P + + L K+G V EA ++ +E KG
Sbjct: 335 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLF-DEFDKG 393
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+ +P++ YN L+ G+C+ G A M ++ C N TY +L++GL ++G E
Sbjct: 394 S-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFER-KCKPNAFTYNVLIEGLSKNGNVKE 451
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
RVLEEML +P T+ +L GL +GK+ +A+ + + K+ D W
Sbjct: 452 GVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKV-DKESW 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 8/331 (2%)
Query: 157 LMDVLCQCRRSDLALHVF--QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
L+ ++ Q + DLAL +F G + ++YH ++ L R + L+ +
Sbjct: 50 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN 109
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCND 273
GE++ I + L G+ + +M+I +I G+K + +S +++ N
Sbjct: 110 SYPPIKCGENLFIDLLRNYGLA--GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 167
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
D+ A N G P++ + + + L + I KVLDE+ G P+LV
Sbjct: 168 RFDLVHA-MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVT 226
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L G ++ A V+EE + +G + P Y +L+ G C G + A + M
Sbjct: 227 YTTILGGYVARGDMESAKRVLEEMLDRGWY-PDAITYTVLMDGYCKLGRFSEAATVMDDM 285
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K N TYG+++ LC++ + EA + +EML RS+ P +I LC K
Sbjct: 286 EKN-EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHK 344
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA +M+ +PD ++ S+L+ +C
Sbjct: 345 VDEACGLWRKMLKNNCMPDNALLSTLIHWLC 375
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 51/440 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I + + E + +QM +SC + I Y + + + L
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + ++ C ++NTL+ +VK K A ++ R C K + NL++D
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC-----KPSHFTFNLMID 384
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ C+ + DLA +FQ M +GC PD +Y+I++ G C R+++A LL R+++
Sbjct: 385 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL----ERMTEA 440
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D+V Y +++ LC ++ +A ++ E +LR G + +D+ C+
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYE-VLRNG-------GYFLDVVTCS------- 485
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
LI G L R+ + +K+L EM G P +V Y +
Sbjct: 486 -------TLIDG--------------LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 524
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K +D++L E + KG VPTV Y+I++ LC + M LK M ++ G
Sbjct: 525 GFCKADQLDKSLAFFSEMLDKGC-VPTVITYSIVIDKLCKSARVRDGCMLLKTMLER-GV 582
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ Y ++DGLC+ + EA + + M P V TYNVL+ LC + + EA+
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIH 642
Query: 460 WLEEMISQAKLPDISVWSSL 479
LE M S LPD ++S+
Sbjct: 643 LLEVMESDGCLPDTVTYNSV 662
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 219/476 (46%), Gaps = 22/476 (4%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYR-----HNGPVYASMIGILSESNRITEMKEVI 68
LS ++K+K+ +EA + + N+R + Y+++I ++ + ++
Sbjct: 139 LSAFVRKKKA--------QEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLL 190
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
D+M+ ++V+ T I+ G+++ A+ ++++ Q NC ++ L+ + K
Sbjct: 191 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKS 249
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+++ A L L + + N L++ C+ D A+ +F +M C PD +
Sbjct: 250 ARISDAS-LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+IL+ G C R + LL M + G + + Y TL+ +L GK DA +
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMV----KYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 364
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+ +LR+ K + + C G+ ++ A L RG +P + +Y+ M
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQ-LDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
RI + ++L+ M G P +V Y + ++ L K VDEA EV E G F+ V
Sbjct: 424 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 483
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+ L+ GLC + A L++M + G + Y IL+ G C+ + ++ E
Sbjct: 484 C-STLIDGLCKSRRLDDAEKLLREMERN-GSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML + P V TY+++I LC + + M L+ M+ + PD V++S++ +C
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC 597
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 182/405 (44%), Gaps = 24/405 (5%)
Query: 88 RTYARAGQLNEAVSLFK--------NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
R + L++AV F S+F C N LL V++ K + A+ LF
Sbjct: 104 RVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTC-------NCLLSAFVRKKKAQEAYDLFK 156
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
G I + + L++ C+ R A + EM+ +G P Y+ ++KGLC++
Sbjct: 157 NHRCGLCSPDSI-TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDN 215
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R++ A + +R Q+ ++ Y L+ ALC +I DA ILE ++ G
Sbjct: 216 GRVDSAL-----VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPN 270
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G +++ A L N+ L P + +Y+ + + R +G K+L
Sbjct: 271 VVTYNTLINGFCKLG-NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM G P+ + Y + +L K G +A + + M++ P+ +N+++ C
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G +A + M+ + GC+ + TY I++ G CR R +A ++LE M P V
Sbjct: 389 VGQLDLAYELFQLMTDR-GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN ++ GLC + EA E + + D+ S+L+ +C
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 492
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 217/481 (45%), Gaps = 20/481 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P+ + +++++ A+K F + P Y+H+ ++ + E ++
Sbjct: 97 LVPSVVGRVLQQLDDLDKAVKFFDWCTGQ-PGYKHSKFTCNCLLSAFVRKKKAQEAYDLF 155
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+ C ++T I + +A +A L + + V +NT++K +
Sbjct: 156 KNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDN 215
Query: 129 SKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++++A + + R+C + + +L+D LC+ R A + ++M GC P+
Sbjct: 216 GRVDSALVHYRDMQRNC-----APSVITYTILVDALCKSARISDASLILEDMIEAGCAPN 270
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ G C ++EA L M + D+ Y L+ C Q + QD
Sbjct: 271 VVTYNTLINGFCKLGNMDEAVVLFNQML----ENSCSPDVFTYNILIDGYCKQERPQDGA 326
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L+++++ G + + + G+ I+ A +L L R PS +++ M ID
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID-AFNLAQMMLRRDCKPSHFTFNLM-ID 384
Query: 306 LYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
++ + G++ ++ M +G P + Y ++ + +D+A +++E M +
Sbjct: 385 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER-MTEAGCP 443
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMY-LKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V YN ++ GLC A S V Y + ++ + G + T L+DGLC+ R +A
Sbjct: 444 PDVVTYNSIVSGLCKA--SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 501
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
++L EM P V Y +LI G C + +++ + EM+ + +P + +S ++ +
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561
Query: 484 C 484
C
Sbjct: 562 C 562
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 44/347 (12%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+ + +++ A +F+ C PD +Y L+ G C R +A LL M
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM-- 193
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++G +Y T++ LCD G++ A+ H D+
Sbjct: 194 --EKRGIVPHNAVYNTIIKGLCDNGRVDSALV-----------------HYRDM------ 228
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
R PS+ +Y+ + L RI + +L++M G P++V Y
Sbjct: 229 --------------QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTY 274
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ K G +DEA+ V+ +M++ + P V YNIL+ G C L++M
Sbjct: 275 NTLINGFCKLGNMDEAV-VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K GC N TY L+D L + G++++A + + ML R P T+N++I C +G+
Sbjct: 334 K-YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 392
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
A + M + LPDI ++ +++ C ++ R+ LE+++
Sbjct: 393 DLAYELFQLMTDRGCLPDIYTYNIMISGA-CRANRIDDARQLLERMT 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 143/318 (44%), Gaps = 6/318 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI +NRI + ++++++M C + + + +A Q++EA +++ L
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +TL+ + K +L+ A L LR + + +L+ C+ +
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL-LREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D +L F EM +GC P +Y I++ LC R+ + LL +M ++G D +
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTML----ERGVTPDAI 587
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y +++ LC +A + L K++++ AP + + + ++ A L+
Sbjct: 588 VYTSVIDGLCKSDSYDEAYE-LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P +Y+++ + + ++ M+++G P+ MY L L +
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEK 706
Query: 347 VDEALEVIEEEMVKGTFV 364
+D+A+E+ EE + G V
Sbjct: 707 MDQAMEIWEEALEAGADV 724
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 221/481 (45%), Gaps = 25/481 (5%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P + +++ Q AL+ F+ A +K Y HN Y +MI IL + TE++ ++
Sbjct: 181 LNPDAVVKVLNLQTDAQNALRFFQWA-DKQEGYDHNTDAYFTMIDILGRAKMFTELQSLL 239
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNCVNWTQSFNTLLKEMV 126
+M+ E S+ + + +Y R+G+ E++ F + + + ++N++L +V
Sbjct: 240 QKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLV 299
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC----RRSDLALHVFQEMDFQGC 182
K KL+ A LF + + + + NL + QC + + A+ + +M
Sbjct: 300 KNKKLDMAENLFAQM-----INNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNY 354
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD +Y I++ LC + + +A Y + ++ + G +I Y L+ LC + +
Sbjct: 355 APDVVTYTIVISALCKRKMIEQA----YGVLQKMRENGCEPNIYTYNALIQGLCAVRRPE 410
Query: 243 DAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+A++++ ++ +G P + I LC ++ AK + NEAL RG P+ +Y
Sbjct: 411 EALELV-TLMEQGGVPPNIYTYTILTHGLCKL---RRLDRAKEMFNEALARGLKPNRVTY 466
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + R++E +L EM P V Y + L + + +AL + +E
Sbjct: 467 NTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMEN 526
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG V NIL +GL GN A ++ ++M K G + Y + + L G
Sbjct: 527 KGYDV-NFDTLNILARGLARVGNHKDASIFYRRM-KDRGFAYSASDYYLAIHCLSTAGEM 584
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +L EM+ + Y P + TYN +I+G C G+ +A L MI PD ++ L
Sbjct: 585 EEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNIL 644
Query: 480 V 480
+
Sbjct: 645 I 645
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 150/371 (40%), Gaps = 42/371 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y SMI ++ + +++D M ++ + I + + +A +
Sbjct: 322 NNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVL 381
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + C ++N L++ + + E A L G V I + +L LC+
Sbjct: 382 QKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGG-VPPNIYTYTILTHGLCK 440
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A +F E +G P+R +Y+ L+ G C RL EA +L M Q
Sbjct: 441 LRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEM----HQNDCTP 496
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEK--------------ILRKGLK------------ 257
D V Y TL+ L ++ DA+++ ++ IL +GL
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFY 556
Query: 258 --------APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
A + + + + + ++E A++L+ E + +G P+L +Y+ M +
Sbjct: 557 RRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQ 616
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV---PT 366
GR+ + D +L+ M G P Y + G +A ++ + +G + P
Sbjct: 617 GRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPV 676
Query: 367 VRVYNILLKGL 377
++ + L +GL
Sbjct: 677 IQEPDELPEGL 687
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A + L W Q+G + Y T++ L + +L+K+ +G + +S
Sbjct: 195 DAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSML 254
Query: 264 HRIDLCPCNDG---EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
H + G E +E A +L+ E G+ A Y+++ + L ++ + +
Sbjct: 255 HSFVMSYGRSGRFKESLE-AFNLMKEMGYEPGLIDTA-YNSVLVSLVKNKKLDMAENLFA 312
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M G + + Y + + F +++A++++++ M++ + P V Y I++ LC
Sbjct: 313 QMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD-MIQNNYAPDVVTYTIVISALCKR 371
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A L+KM ++ GC N TY L+ GLC R EA ++ M P + T
Sbjct: 372 KMIEQAYGVLQKM-RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYT 430
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y +L GLC + + A E +++ P+ +++L+ C
Sbjct: 431 YTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYC 474
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 230/473 (48%), Gaps = 16/473 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
++ +++ ++++++ +++L+ FK ++H Y +MI L +N + + ++
Sbjct: 39 VSESHVVKVLRQEHDIVSSLEYFKSLSNS-GTFKHTHLTYETMIDKLGRNNEMDGVSYLL 97
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
QMK ++ C +F I+ Y R+ + + +F + +F C + +N +L ++ +
Sbjct: 98 QQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQ 157
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ + + L+ + ++ + + N+L+ LCQ + D A + EM +GC PD S
Sbjct: 158 NLFKMINALY-NNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS 216
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV-IYRTLLFALCDQGKIQDAMQI 247
Y ++ +C +++A L E +V +Y L+ +C + + ++A +
Sbjct: 217 YTTVISSMCKLGDVDKARELAMKF----------EPVVPVYNALIHGVCKECRFKEAFDL 266
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ +++ +G+ P + + +D ++E + ++ +RG P++ +++++ +
Sbjct: 267 MNEMVDRGVD-PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFF 325
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
GR+ + + + M +G P++V Y + L DG +DEA+ V + M K + P V
Sbjct: 326 VRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQ-MEKDSIRPNV 384
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ ++ G +G+ A KM GC N Y +VD LC+ F +A +++
Sbjct: 385 TTYSTIIYGFAKSGDLVSACETWNKMI-NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLID 443
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M+ P V T+N I+GLC G+ A+ L++M LP+I ++ L+
Sbjct: 444 NMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELL 496
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 211/496 (42%), Gaps = 52/496 (10%)
Query: 25 LTALKIFKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
L + +FK Y N + G P Y ++ L ++ ++ +++ +M C+
Sbjct: 154 LLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPD 213
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
D + T I + + G +++A L V +N L+ + KE + + A L +
Sbjct: 214 DVSYTTVISSMCKLGDVDKARELAMKFEPVVPV-----YNALIHGVCKECRFKEAFDL-M 267
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
V + S + ++ L +L+L VF M +GC P+ +++ L+KG
Sbjct: 268 NEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVR 327
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R+ +A L M ++G ++V Y TL+ LC G + +A+ + ++ + ++ P
Sbjct: 328 GRVGDAVGLWNLMI----REGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR-P 382
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + D+ A N+ + G P++ Y+ M L + ++
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI 442
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL-- 377
D M + G P+++ + + L + G V+ A+ V+++ M K +P +R YN LL GL
Sbjct: 443 DNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQ-MEKYECLPNIRTYNELLDGLFR 501
Query: 378 ----------------------CDAGNSAVAVMYLKKMSKQV----------GCVANGET 405
C N+ + M +QV G + T
Sbjct: 502 ANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTIT 561
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLI-RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
V+ C+ G+ A +VL+ + + + + T+ +++ G+C+ EAV++L EM
Sbjct: 562 VNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEM 621
Query: 465 ISQAKLPDISVWSSLV 480
+ + P+I+ W+ LV
Sbjct: 622 LKRGIFPNIATWNVLV 637
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ GC + + Y +++D L F + + M P V TYNVL++ LC GK
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A L EM ++ PD ++++++S+C
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMC 225
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 215/474 (45%), Gaps = 15/474 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+TP L ++++ T++++F + YRH+ VY +IG L + + ++
Sbjct: 70 ITPFQLCKLLELPLDVSTSMELFSWTGSQ-KGYRHSFDVYQVLIGKLGSNGEFKTIDRLL 128
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVK 127
QMK + K+S+F + +R Y +AG + L + ++C +S+N +L+ +V
Sbjct: 129 MQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVS 188
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + A +F ++ + + ++M LC D AL V ++M GC P+
Sbjct: 189 GNCHKVAANVFY-DMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSV 247
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ L R+NEA LL MF G D + ++ LC +I +A ++
Sbjct: 248 IYQTLIHSLSKCNRVNEALQLLEEMFL----MGCVPDAETFNDVILGLCKFDRINEAAKM 303
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ ++L +G + C G ++ AK L R P+ ++ +
Sbjct: 304 VNRMLIRGFTPDDITYGYLMNGLCKIGR-VDAAKDL----FYRIPKPTSVIFNTLIHGFV 358
Query: 308 NEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + VL +M T G P + Y + + +K G+V ALEV+ + KG P
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC-KPN 417
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y IL+ G C G A L +MS G N + L+ C++ R EA +
Sbjct: 418 VYSYTILVDGFCKLGKIDEAYNLLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIF 476
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EM + P V T+N LI GLC + + A+ L +MIS+ + + +++L+
Sbjct: 477 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 206/429 (48%), Gaps = 11/429 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + +RI E +++++M D + + + G+++ A LF + + V
Sbjct: 291 LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSV-- 348
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
FNTL+ V +L+ A + + + + + N L+ + LAL V
Sbjct: 349 --IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVL 406
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M +GC P+ SY IL+ G C +++EA +LL M S G + V + L+ A
Sbjct: 407 RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM----SADGLKPNTVGFNCLISA 462
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C + +I +A++I ++ RKG K + + C + ++I+ A L+ + + G +
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVA 521
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + G I E K+++EM +G + Y + + L + G VD+A +
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+ M++ VP+ NIL+ GLC +G AV + K+M + G + T+ L++GLC
Sbjct: 582 EK-MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLC 639
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R GR + + ++ P TYN L+ LC G Y+A + L+E I +P+
Sbjct: 640 RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDR 699
Query: 475 VWSSLVASV 483
WS L+ S+
Sbjct: 700 TWSILLQSL 708
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 41/219 (18%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I I E ++++++M + + + I+ RAG++++A SLF
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +L++ + S + S N+L++ LC+
Sbjct: 582 EK---------------MLRDGLVPSSI---------------------SCNILINGLCR 605
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A+ +EM +G PD +++ L+ GLC R+ + +MF ++ +G
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG----LTMFRKLQAEGIPP 661
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
D V Y TL+ LC G + DA +L++ + G P R
Sbjct: 662 DTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGF-VPNDR 699
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 15/470 (3%)
Query: 22 KSPLTAL---KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
++PL A ++FK A K +++ +SMI + +++++ +++ ++
Sbjct: 52 ETPLEAPISEQMFKSAP-KMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVI 110
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ F R Y +A +AV LF + +F C +SFN++L ++ E
Sbjct: 111 IERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170
Query: 138 F---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+ + S + S NL++ LC+ D A+ VF+ M + C PD +Y LM
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMD 230
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + R++EA LL M +G VIY L+ LC +G + ++++ + K
Sbjct: 231 GLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C G+ ++ A SL+ + IP+ +Y + L + R ++
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMD 345
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G ++L M +G+ + +Y ++ LFK+G +EA+ + ++ KG P + VY+ ++
Sbjct: 346 GARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGC-RPNIVVYSAVI 404
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G A L M GC+ N TY L+ G + G EA +V EM
Sbjct: 405 DGLCREGKPNEAKEILNGMISS-GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGC 463
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+VLI GLC +G+ EA+M +M++ PD +SS++ +C
Sbjct: 464 SRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 194/472 (41%), Gaps = 38/472 (8%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N NG + +I L + + EV M C + T + + +++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLN 155
V L + C +N L+ + K+ L L FL+ C+ EV + N
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV-----TYN 296
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC + D A+ + + M C P+ +Y L+ GL RR + LL SM
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM--- 353
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++G + IY L+ L +GK ++AM + +K+ KG + + C +G+
Sbjct: 354 -EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E AK ++N + G +P++ +YS++ + G E +V EM G + Y
Sbjct: 413 PNE-AKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYS 471
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-- 393
+ L G V EA+ V + + G P Y+ ++KGLC G+ A+ +M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLC 530
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL----- 448
++ + TY IL+DGLC A +L ML R P V T N + L
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD 590
Query: 449 -CSIGKQY---------------EAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G+ + A +E M+ + P S W+ +V +C
Sbjct: 591 SCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEIC 642
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L + KQ+ + ++ +E+ YR N +Y+ +I L + + E
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEER--GYRLNQHIYSVLISGLFKEGKAEEAM 382
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M C V++ I R G+ NEA + + C+ ++++L+K
Sbjct: 383 TLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGF 442
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K E A I R ++L+D LC R A+ V+ +M G PD
Sbjct: 443 FKTGLSEEA-IQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++KGLC ++ A L + M + K S D+V Y LL LC Q + A+
Sbjct: 502 TVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPK-SQPDVVTYNILLDGLCMQKDVSRAV 560
Query: 246 QILEKILRKG 255
+L +L +G
Sbjct: 561 DLLNCMLDRG 570
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 204/434 (47%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMIG+L +++R+ E E+ + M + + T I Y AG+ +A SL +
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C+ S+N +L + ++ +++ A F + + + N+++D+LC+ +
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE--MKKDAIPNLSTYNIMIDMLCKAGK 424
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL V M G +P+ + +I++ LC +RL++A S+F + K D V
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC----SIFEGLDHKTCRPDAV 480
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ L G++ +A ++ E++L
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDAN------------------------------- 509
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
IP+ Y+++ + + GR +G K+ +EM G P L++ + +FK G
Sbjct: 510 -----QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+++ + +E G F+P R Y IL+ GL AG + A M +Q GCV + Y
Sbjct: 565 IEKGRALFQEIKNLG-FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ-GCVLDTRAY 622
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++DG C+ G+ +A ++LEEM + + P V TY +I GL I + EA M EE S
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 467 QAKLPDISVWSSLV 480
+ ++ ++SSL+
Sbjct: 683 KGIELNVVIYSSLI 696
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 190/430 (44%), Gaps = 43/430 (10%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ R+ + + + + +C + + I R G+++EA L++ + N
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ + +L++ K + E H ++ + LN MD + + +
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIY-NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+FQE+ G PD SY IL+ GL +EA Y +F+ + ++G D Y T
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA----YELFYTMKEQGCVLDTRAYNT 624
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ C GK+ A Q+LE++ KG +
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHE--------------------------------- 651
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P++ +Y ++ L R+ E + +E ++KG ++V+Y + + K G +DEA
Sbjct: 652 ---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EE M KG P V +N LL L A + A++ + M K + C N TY IL+
Sbjct: 709 YLIMEELMQKG-LTPNVYTWNCLLDALVKAEEISEALVCFQSM-KDLKCTPNYITYSILI 766
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC+ +F +A +EM + + P V TY +I GL G EA E+ + +
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826
Query: 471 PDISVWSSLV 480
D +++++++
Sbjct: 827 ADSAIYNAII 836
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 180/455 (39%), Gaps = 84/455 (18%)
Query: 19 KKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
+K + T ++ ++ K +R Y ++IG LS S M + QM+
Sbjct: 179 RKLREAFTFIQTMRKLK-----FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+F T IR +AR G+++ A+S LL EM K + LE +L+
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALS-------------------LLDEM-KSNSLEPDVVLY 273
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
N+ +D + + D+A F EM G D +Y ++ LC
Sbjct: 274 ----------------NVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCK 317
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
RLNEA L F + Q Y T++ GK +DA +LE+ RKG
Sbjct: 318 ADRLNEAVEL----FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC-- 371
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
IPS+ SY+ + L +G++ E K
Sbjct: 372 ----------------------------------IPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+EM+ K P+L Y + L K G ++ AL V+ + M P V NI++ LC
Sbjct: 398 FEEMK-KDAIPNLSTYNIMIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLC 455
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A A + + + C + TY L++GL R GR EA ++ E+ML + P
Sbjct: 456 KAQRLDDACSIFEGLDHKT-CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
Y LIR G++ + EM+ PD+
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 150/359 (41%), Gaps = 43/359 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + R + ++ ++M C + T + +AG++ + +LF
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + + +S+ L+ +VK EA + + G + +R + N ++D C
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR--AYNTVIDGFC 630
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A + +EM +G P +Y ++ GL RL+EA Y +F KG
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSKGIE 686
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA-- 280
++VIY +L+ G+I +A I+E++++KGL P L E+I A
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL-TPNVYTWNCLLDALVKAEEISEALV 745
Query: 281 -----KSL---------------------INEALI-------RGGIPSLASYSAMAIDLY 307
K L N+A + +G P++ +Y+ M L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLA 805
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G IVE D + ++ + KG +Y A + L +A + EE +KG + T
Sbjct: 806 KAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ +M+ G+ ++ ++ + ++G VD AL +++E M + P V +YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDE-MKSNSLEPDVVLYNVCIDCF 280
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG +A +M K G V + TY ++ LC+ R EA + E M PC
Sbjct: 281 GKAGKVDMAWKXFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
YN +I G GK +A LE + +P + ++ +++
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L+EM GF PS + + K + EA I+ M K F P Y L+
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT-MRKLKFRPAFSAYTNLIG 208
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L + +S + ++M +++G N + L+ R+GR A +L+EM S
Sbjct: 209 ALSTSRDSDCMLTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLE 267
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V YNV I GK A EM + + D ++S++ +C
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 212/459 (46%), Gaps = 56/459 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
A K F E K NG V Y SMIG+L +++R+ E E+ + M +
Sbjct: 289 AWKFFHEMKA-------NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I Y AG+ +A SL + + C+ S+N +L + ++ +++ A F
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE- 400
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + N+++D+LC+ + + AL V M G +P+ + +I++ LC +R
Sbjct: 401 -MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L++A S+F + K D V Y +L+ L G++ +A ++ E++L
Sbjct: 460 LDDAC----SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN------ 509
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
IP+ Y+++ + + GR +G K+ +E
Sbjct: 510 ------------------------------QIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P L++ + +FK G +++ + +E G F+P R Y IL+ GL AG
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG-FIPDARSYTILIHGLVKAG 598
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A M +Q GCV + Y ++DG C+ G+ +A ++LEEM + + P V TY
Sbjct: 599 FAHEAYELFYTMKEQ-GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+I GL I + EA M EE S+ ++ ++SSL+
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 190/430 (44%), Gaps = 43/430 (10%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L ++ R+ + + + + +C + + I R G+++EA L++ + N
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ + +L++ K + E H ++ + LN MD + + +
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIY-NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+FQE+ G PD SY IL+ GL +EA Y +F+ + ++G D Y T
Sbjct: 569 RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA----YELFYTMKEQGCVLDTRAYNT 624
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ C GK+ A Q+LE++ KG +
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHE--------------------------------- 651
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P++ +Y ++ L R+ E + +E ++KG ++V+Y + + K G +DEA
Sbjct: 652 ---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EE M KG P V +N LL L A + A++ + M K + C N TY IL+
Sbjct: 709 YLIMEELMQKG-LTPNVYTWNCLLDALVKAEEISEALVCFQSM-KDLKCTPNYITYSILI 766
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC+ +F +A +EM + + P V TY +I GL G EA E+ + +
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826
Query: 471 PDISVWSSLV 480
D +++++++
Sbjct: 827 ADSAIYNAII 836
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 180/455 (39%), Gaps = 84/455 (18%)
Query: 19 KKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
+K + T ++ ++ K +R Y ++IG LS S M + QM+
Sbjct: 179 RKLREAFTFIQTMRKLK-----FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+F T IR +AR G+++ A+S LL EM K + LE +L+
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALS-------------------LLDEM-KSNSLEPDVVLY 273
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
N+ +D + + D+A F EM G D +Y ++ LC
Sbjct: 274 ----------------NVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCK 317
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
RLNEA L F + Q Y T++ GK +DA +LE+ RKG
Sbjct: 318 ADRLNEAVEL----FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC-- 371
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
IPS+ SY+ + L +G++ E K
Sbjct: 372 ----------------------------------IPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+EM+ K P+L Y + L K G ++ AL V+ + M P V NI++ LC
Sbjct: 398 FEEMK-KDAIPNLSTYNIMIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLC 455
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A A + + + C + TY L++GL R GR EA ++ E+ML + P
Sbjct: 456 KAQRLDDACSIFEGLDHKT-CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
Y LIR G++ + EM+ PD+
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 150/359 (41%), Gaps = 43/359 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + R + ++ ++M C + T + +AG++ + +LF
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + + +S+ L+ +VK EA + + G + +R + N ++D C
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR--AYNTVIDGFC 630
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A + +EM +G P +Y ++ GL RL+EA Y +F KG
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSKGIE 686
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA-- 280
++VIY +L+ G+I +A I+E++++KGL P L E+I A
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL-TPNVYTWNCLLDALVKAEEISEALV 745
Query: 281 -----KSL---------------------INEALI-------RGGIPSLASYSAMAIDLY 307
K L N+A + +G P++ +Y+ M L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLA 805
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G IVE D + ++ + KG +Y A + L +A + EE +KG + T
Sbjct: 806 KAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ +M+ G+ ++ ++ + ++G VD AL +++E M + P V +YN+ +
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDE-MKSNSLEPDVVLYNVCIDCF 280
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG +A + +M K G V + TY ++ LC+ R EA + E M PC
Sbjct: 281 GKAGKVDMAWKFFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
YN +I G GK +A LE + +P + ++ +++
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L+EM GF PS + + K + EA I+ M K F P Y L+
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT-MRKLKFRPAFSAYTNLIG 208
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L + +S + ++M +++G N + L+ R+GR A +L+EM S
Sbjct: 209 ALSTSRDSDCMLTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLE 267
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V YNV I GK A + EM + + D ++S++ +C
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 203/415 (48%), Gaps = 15/415 (3%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
D C SVF +++Y+R +++A+S+ + S+N +L ++ +
Sbjct: 128 DLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKR--- 184
Query: 134 AHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+I F + + ++S++ + N+L+ C D+AL F M+ +GC P+ +Y
Sbjct: 185 -NISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTY 243
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ G C R++++ LL SM + KG +++ Y ++ LC +G++++ +L
Sbjct: 244 NTLIDGYCKLRKIDDGFELLRSM----ALKGLEPNLISYNVVINGLCREGRMKEISFVLT 299
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ ++G + + + C +G + A + E L G PS+ +Y+++ +
Sbjct: 300 EMNKRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + + LD+MR +G P+ Y + + G ++EA V++E M+ F P+V
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE-MIDNGFSPSVVT 417
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ G C AG A+ L+ M K+ G + +Y ++ G CR EA RV +M
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDM-KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + P TY+ LI+G C + EA +EM+ PD +++L+ + C
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYC 531
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 193/400 (48%), Gaps = 9/400 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + AG L+ A+ F + + C+ ++NTL+ K K++ L LRS
Sbjct: 212 IRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL-LRSMALKG 270
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + S N++++ LC+ R V EM+ +G D +Y+ L+KG C + ++A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA- 329
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
M + + G ++ Y +L+ ++C G + A + L+++ +GL P R +
Sbjct: 330 ---LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL-CPNERTYTT 385
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + + A ++ E + G PS+ +Y+A+ G++V+ VL++M+ KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y L+ + VDEAL V + + KG P Y+ L++G C+ + A
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG-IKPDTITYSSLIQGFCEQRRTKEA 504
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+M + VG + TY L++ C +G +A ++ EM+ + P V TY+VLI
Sbjct: 505 CDLFDEMLR-VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GL + EA L ++ + +P + +L+ + C N
Sbjct: 564 GLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN 602
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 193/477 (40%), Gaps = 35/477 (7%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
AL+ F ++K PN Y ++I + +I + E++ M E +
Sbjct: 224 ALRFFDRMEKKGCLPNV----VTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYN 279
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILFLRS 141
I R G++ E + +++ ++NTL+K KE A H LR
Sbjct: 280 VVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + L+ +C+ + A +M +G P+ +Y L+ G
Sbjct: 340 GLSPSVITYTS----LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+NEA +L M G +V Y L+ C GK+ DA+ +LE + KGL P
Sbjct: 396 MNEAYRVLKEMI----DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL-TPDV 450
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ L D++ A + + + +G P +YS++ + R E + DE
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P Y A + A +G + +A++ + EMV+ +P V Y++L+ GL
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLQKAIQ-LHNEMVEKGVLPDVVTYSVLINGLNKQA 569
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVL 426
+ A L K+ + V + TY L++ G C G EA +V
Sbjct: 570 RTREAKRLLLKLFYE-ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
E ML +++ P YNV+I G C G +A +EM+ L +LV ++
Sbjct: 629 ESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTL 685
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 171/423 (40%), Gaps = 21/423 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L R+ E+ V+ +M + + T I+ Y + G ++A+ + +
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++ +L+ M K + A FL + ++ L+D Q
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRA-TEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A V +EM G P +Y+ L+ G C ++ +A +L M +KG D+V
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM----KEKGLTPDVVS 452
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T+L C + +A+++ K++ KG+K + C E A L +E
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE-ACDLFDEM 511
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L G P +Y+A+ EG + + ++ +EM KG P +V Y + L K
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571
Query: 348 DEA----LEVIEEEMVKGTFVPTVRVYNI----------LLKGLCDAGNSAVAVMYLKKM 393
EA L++ EE V + N L+KG C G A + M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ +G Y +++ G CR G +A + +EM+ + T L++ L GK
Sbjct: 632 LEK-NHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGK 690
Query: 454 QYE 456
E
Sbjct: 691 VNE 693
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 216/489 (44%), Gaps = 56/489 (11%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y HN Y ++ L+ +R + V +M SC+ FA +R R+ QL +A
Sbjct: 3 YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + CV +N L+ K A FL + + ++D
Sbjct: 63 KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA-FKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ R+ A+ + EM +GC P+ +Y+++++GLC +R+L+EA +L M R G
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR----G 177
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y + + LC ++ +A + L ++ P + + D++ A
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM----PVTPDVVSYTTVINGLCKSGDLDSA 233
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+++ RG P + +YS++ G + +LD M G P++V Y + L A
Sbjct: 234 SRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 293
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + G + +A +++ EM + F P V YN + GLC A A +M ++ GC
Sbjct: 294 LHRLGHIGKAEDML-VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER-GCT 351
Query: 401 ANGETYGILV----------DGLCRDGRFLEA----SRVLEE-----------MLIRSYW 435
N +Y +L+ DGLC+ GRF EA S+VL+E +++ S+
Sbjct: 352 PNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 411
Query: 436 P------------------C--VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
C V T+N+L+ GLC + +A L M+ + +PD
Sbjct: 412 KRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471
Query: 476 WSSLVASVC 484
+ +LV ++C
Sbjct: 472 YGTLVDAMC 480
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 222/495 (44%), Gaps = 44/495 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A +F+E +K + + + +A ++ L SN++ + ++++ +MK C D+++
Sbjct: 26 ASAVFQEMIDK--SCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y++A +A + + +C+ ++ ++ + K + A + L
Sbjct: 84 ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDA-VKLLDEMRDKG 142
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
I + N++++ LC+ R+ D A + +EM +G +PD +Y+ +KGLC R++EA
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202
Query: 207 HLL-----------YS-----------------MFWRISQKGSGEDIVIYRTLLFALCDQ 238
L Y+ M +S +G D+V Y +L+ C
Sbjct: 203 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G+++ AM +L+ +L+ G + P + L + I A+ ++ E RG P + S
Sbjct: 263 GEVERAMGLLDSMLKLGCR-PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS----------LVMYEAKLAALFKDGMVD 348
Y+A L R+ + V D M +G P+ +++Y L L K G D
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA + + + + P V YN++L C A+ K+M ++ C N T+ I
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC--NVVTWNI 439
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
LV GLC D R +A +L M+ + P TY L+ +C GK A+ EE +
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499
Query: 469 KLPDISVWSSLVASV 483
+PD+ +S+L+ +
Sbjct: 500 CVPDVVTYSALITGL 514
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 167/377 (44%), Gaps = 51/377 (13%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+E + + N L+ L + R D A VFQEM + C PD ++ IL++GLC +L
Sbjct: 2 GYE--HNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLE 59
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSR 262
+A LL R+ + G D IY L+ A + L ++++ L +
Sbjct: 60 KARKLL----GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTY 115
Query: 263 RHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ +D LC E A L++E +G P++ +Y+ + L E ++ E K+L+E
Sbjct: 116 TNIVDGLCK---AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEE 172
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G++P +V Y + + L K VDEA + + V P V Y ++ GLC +G
Sbjct: 173 MAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCKSG 228
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL--------------- 426
+ A L MS + GC + TY L+DG C+ G A +L
Sbjct: 229 DLDSASRMLDHMSNR-GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 287
Query: 427 ----------------EEMLI----RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
E+ML+ R + P V +YN I GLC + +A + M+
Sbjct: 288 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 347
Query: 467 QAKLPDISVWSSLVASV 483
+ P+ S +S L+ +
Sbjct: 348 RGCTPNASSYSMLIVDI 364
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 17/242 (7%)
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+R HR D A ++ E + + P +++ + L ++ + K+L
Sbjct: 18 TREHRHD-----------KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLG 66
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M+ G P +Y A ++ K +A + + E MVK +PTV Y ++ GLC A
Sbjct: 67 RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAE-MVKNHCLPTVVTYTNIVDGLCKA 125
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ AV L +M + GC N TY ++V+GLC + + EA ++LEEM +R Y+P V T
Sbjct: 126 ERTRDAVKLLDEMRDK-GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
YN I+GLC + EA +L M PD+ +++++ + C + DL+ + L+ +
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL-CKSGDLDSASRMLDHM 240
Query: 501 SS 502
S+
Sbjct: 241 SN 242
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + + L E R + V EM K P + L L + +++A +++
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
G VP +YN L+ G A + A +L +M K C+ TY +VDGLC+
Sbjct: 69 KEMGC-VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAE 126
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R +A ++L+EM + P + TYNV++ GLC K EA LEEM + PD+ ++
Sbjct: 127 RTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYN 186
Query: 478 SLVASVC-CNTAD 489
S + +C C+ D
Sbjct: 187 SFIKGLCKCDRVD 199
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 199/439 (45%), Gaps = 45/439 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + + K S A+++ K+ +EK + N VY+++I L + ITE
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEK--GCKPNVVVYSTIIDSLCKDKLITEAM 137
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E + +M +++ + + G+ NEA SLFK + + N + T +FN L+ +
Sbjct: 138 EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGL 197
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE + A +F + V+ + + N LMD C + D A +F M +GC P
Sbjct: 198 SKEGMILEAQCVF-ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+IL+KG C R++EA LL M S K D V Y TL+ C G+ QDA
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEM----SHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++LE++ GL +P L +YS +
Sbjct: 313 KLLEEMRSYGL------------------------------------LPDLMTYSIVLDG 336
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L +G + E ++L M+ P++ +Y + + G ++ A E+ VKG P
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG-IQP 395
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GL G S A + M+ GC+ N TY +++ G R+G A R+
Sbjct: 396 DVVTYTVMISGLLKGGLSNEACELFRDMAVH-GCLPNSCTYNVIIQGFLRNGDTSNAGRL 454
Query: 426 LEEMLIRSYWPCVETYNVL 444
+EEM+ R + T+ +L
Sbjct: 455 IEEMVGRGFSADSSTFQML 473
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 204/437 (46%), Gaps = 10/437 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +++++ LS +I + ++ D+M E ++T I + G A+ L
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLL 105
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + C ++T++ + K+ KL + FL + + + + ++ C
Sbjct: 106 KKMEEKGCKPNVVVYSTIIDSLCKD-KLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RS+ A +F++M + PD +++IL+ GL + + EA + +M +KG
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMI----EKGVEP 220
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKS 282
++ Y L+ C Q ++ +A ++ ++RKG AP R + I + C G I+ AK
Sbjct: 221 NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGC-APSVRSYNILIKGHCKSGR-IDEAKG 278
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ E + P +YS + +GR + K+L+EMR+ G P L+ Y L L
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G +DEA E+++ M + P + +Y IL++G+C+ G A + + G +
Sbjct: 339 KQGHLDEAFELLKA-MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK-GIQPD 396
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY +++ GL + G EA + +M + P TYNV+I+G G A +E
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIE 456
Query: 463 EMISQAKLPDISVWSSL 479
EM+ + D S + L
Sbjct: 457 EMVGRGFSADSSTFQML 473
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 174/370 (47%), Gaps = 12/370 (3%)
Query: 135 HILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
H F S G K +Q + + L++ L + A+ +F EM G PD +Y
Sbjct: 27 HFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYS 86
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ GLC A LL M +KG ++V+Y T++ +LC I +AM+ L +
Sbjct: 87 TIINGLCKMGSTTMAIQLLKKM----EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSE 142
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
++ +G+ I CN G E A SL + + R +P +++ + L EG
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNE-ATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I+E V + M KG P++ Y A + +DEA ++ MV+ P+VR Y
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI-MVRKGCAPSVRSY 260
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NIL+KG C +G A L +MS + + TY L+ G C+DGR +A ++LEEM
Sbjct: 261 NILIKGHCKSGRIDEAKGLLAEMSHK-ALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
P + TY++++ GLC G EA L+ M P+I +++ L+ + CN L
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM-CNFGKL 378
Query: 491 NVCRKTLEQL 500
R+ L
Sbjct: 379 EAARELFSNL 388
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 9/340 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ + +L +L++ C A V M G P+ ++ L+ GL + ++ +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L F + + G D++ Y T++ LC G A+Q+L+K+ KG K
Sbjct: 66 AVKL----FDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYS 121
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C D + I A ++E + RG P++ +YS++ N GR E + +M
Sbjct: 122 TIIDSLCKD-KLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P V + + L K+GM+ EA + + E M++ P V YN L+ G C
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEA-QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M ++ GC + +Y IL+ G C+ GR EA +L EM ++ P TY+ L
Sbjct: 240 EAQKLFNIMVRK-GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++G C G+ +A LEEM S LPD+ +S ++ +C
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 186/413 (45%), Gaps = 8/413 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F+T + + ++ +AV LF + + +++T++ + K A I L+
Sbjct: 49 TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA-IQLLKK 107
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + + ++D LC+ + A+ EM +G P+ +Y ++ G CN R
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
NEAT S+F ++ ++ D V + L+ L +G I +A + E ++ KG++ +
Sbjct: 168 SNEAT----SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C+ + ++ A+ L N + +G PS+ SY+ + GRI E +L E
Sbjct: 224 TYNALMDGYCSQSQ-MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P V Y + +DG +A +++EE G +P + Y+I+L GLC G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG-LLPDLMTYSIVLDGLCKQG 341
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A LK M ++ N Y IL+ G+C G+ A + + ++ P V TY
Sbjct: 342 HLDEAFELLKAM-QESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
V+I GL G EA +M LP+ ++ ++ N N R
Sbjct: 401 TVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 213/439 (48%), Gaps = 8/439 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I L ++ ++TE E++++M + + + RAG+++EA LF +
Sbjct: 12 TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C T ++N L+ + K+ +E A+ L + G+E + + N ++ LC+
Sbjct: 72 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDN--ITYNTILSGLCRMG 129
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A F M +G PD +Y+ L+ L + ++ EA L +M ++ + D+
Sbjct: 130 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM--DMADRKVAPDL 187
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ Y TL+ C K +AM++ + ++ KG P + + L +++ A+ +
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY-MPDTVTYNSILLGLARKSNMDEAEEMFK 246
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + G P+ A+YS + G + ++ +EM K F P +++ A + L K
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD+A +V+EE M K VP V YNILL GLC A M GC + +
Sbjct: 307 KVDDAHKVLEE-MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN-GCAPDIVS 364
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++++GLC+ + +A + + M+ R P V T+N+L+ GLC GK EA L+ M
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424
Query: 466 SQAKLPDISVWSSLVASVC 484
LPD ++L+ +C
Sbjct: 425 EHNVLPDGVTCTTLMHGLC 443
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 208/450 (46%), Gaps = 24/450 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L + I +++++M E + + T + R G+++EA F
Sbjct: 79 NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFF 138
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLC 162
++ ++N LL + KE K+ A LF +V + + N L+D C
Sbjct: 139 DSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFC 198
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ ++D A+ +F+++ +G PD +Y+ ++ GL ++EA MF ++ G
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE----MFKKMVDSGCA 254
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN-------DGE 275
+ Y +L C G + +++ E++ K R D+ CN +
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEK--------RFSPDVLLCNAVIDMLCKAK 306
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A ++ E G +P + +Y+ + L + + ++ M G P +V Y
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
L L K V +A V+ + M++ VP V +NIL+ GLC AG A L MS+
Sbjct: 367 VVLNGLCKTNKVHDA-RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ +G T L+ GLCRD R EA R+ + M+ + V +N+++ GLC GK
Sbjct: 426 H-NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484
Query: 456 EAVMWLEEMI-SQAKL-PDISVWSSLVASV 483
+A+++ + M+ S + PD+ +++LV ++
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 186/426 (43%), Gaps = 47/426 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T L + + A+K+FK+ K Y + Y S++ L+ + + E +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK--GYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ +M C + ++ + + R G + + L++ +++
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE----------------- 285
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + +L N ++D+LC+ ++ D A V +EM G PD
Sbjct: 286 ----KRFSPDVLLC---------------NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPD 326
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+IL+ GLC +++A + +F + G DIV Y +L LC K+ DA
Sbjct: 327 VVTYNILLDGLCKTNLVDKA----HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++++ + L P I + ++ AK L++ +P + + +
Sbjct: 383 VLFDRMIERKL-VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK--GTF 363
L + R E ++ M KG ++ + LA L ++G + +AL + + MVK G F
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL-LFFKSMVKSDGEF 500
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y L+ L +AG AV Y ++M+ GC + Y L++GL + GR ++A
Sbjct: 501 SPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGS-GCAPDYVAYNTLMNGLRKQGRHIQAD 559
Query: 424 RVLEEM 429
R+ + M
Sbjct: 560 RLTQAM 565
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M KGF P +V Y ++ L K G V EALE++EE KG P V Y I++ LC AG
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVN-PDVATYTIIVDRLCRAG 59
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A KM ++ GC AN Y L++GLC+D A ++LEEM + Y P TY
Sbjct: 60 KVDEADELFHKMIER-GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
N ++ GLC +GK EA + + M S+ PD+ ++ L+ ++
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 160
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G P + +YS + L G++ E ++++EM KG P + Y + L + G VDE
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+ + + +G TV YN L+ GLC N A L++M+ + G + TY +
Sbjct: 64 ADELFHKMIERGCSANTV-AYNALINGLCKDENIERAYKLLEEMASK-GYEPDNITYNTI 121
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA--VMWLEEMISQ 467
+ GLCR G+ EA + + M R Y P V YN L+ L GK EA + +M +
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181
Query: 468 AKLPDISVWSSLVASVC 484
PD+ +++L+ C
Sbjct: 182 KVAPDLITYNTLIDGFC 198
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 139/301 (46%), Gaps = 8/301 (2%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
L++++E EK + + + ++I +L ++ ++ + +V+++M + +
Sbjct: 277 LELYEEMTEK--RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 334
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ +++A LF + C S++ +L + K +K+ A +LF R ++
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIE-RKL 393
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N+LMD LC+ + D A + M PD + LM GLC D+R +EA
Sbjct: 394 VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVR 453
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK-GLKAPKSRRHRI 266
L F + +KG+ D++ + +L LC +GK+ A+ + +++ G +P +
Sbjct: 454 L----FQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTT 509
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + ++ A + G P +Y+ + L +GR ++ D++ M+ KG
Sbjct: 510 LVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
Query: 327 F 327
F
Sbjct: 570 F 570
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY ++ GLC+ G+ EA ++EEM + P V TY +++ LC GK EA +M
Sbjct: 12 TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCR--KTLEQLSS 502
I + + +++L+ +C D N+ R K LE+++S
Sbjct: 72 IERGCSANTVAYNALINGLC---KDENIERAYKLLEEMAS 108
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M + + P V TY+ +I GLC GK EA+ +EEM + PD++ ++ +V +C
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLC 56
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 218/482 (45%), Gaps = 17/482 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRH--NGPVYASMIGILSESNRITE 63
P LT T L + K + A+++ +E RH + ++ L +R+ +
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSA----RHVPDNTTLTVVVQSLCLGDRVDD 92
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+E++++M ++ + + +L+EAV+L + +++ C ++N+++
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ +++ AH F+ I + L+ C+ R L + E+ +G
Sbjct: 153 GFCRARRVDEAH-GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFT 211
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y ++ GLC RL +A + M + Y +L+ C G + +
Sbjct: 212 PDIVTYSTVIDGLCKAGRLRDAVDIFEEM-------SCAPTAITYNSLIGGYCRAGDMDE 264
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L K++ + C G ++ A L + + P + +++++
Sbjct: 265 AIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR-LDDAYELFQQMVANKLSPDVVTFTSLV 323
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L EGR+ + ++L+E+ +G P++ Y + K V +A E++ + +G F
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG-F 382
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEA 422
VP YNIL+ G C AG + A+ YL +++ + G C + Y I++D LCRDGR +A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ EEM+ R Y P T+ ++ LC + +A LEEMI P ++V++
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502
Query: 483 VC 484
C
Sbjct: 503 YC 504
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 162/354 (45%), Gaps = 13/354 (3%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P ++T T L K + L++ E + + + Y+++I L ++ R+ +
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRR--GFTPDIVTYSTVIDGLCKAGRLRDA 233
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
++ ++M SC + + I Y RAG ++EA+ L + C ++ TL+
Sbjct: 234 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K +L+ A+ LF + ++ + + L+D LC R + AL + +E+ +GC P
Sbjct: 291 FCKMGRLDDAYELF-QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y+ ++ G C ++ +A L+ R G + V Y L+ C G+ A
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELVADFRSR----GFVPNTVTYNILVAGCCRAGRTDQA 405
Query: 245 MQILEKILRKGLKAPKS-RRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+Q L+++ +G P S + I L C DG + A E + RG +P+ A+++ +
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR-TDDAVQFYEEMIQRGYVPAAATFATV 464
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
L + + ++L+EM G P +A ++A + GM+ +A E+ E
Sbjct: 465 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P ++N+++ GLC AG A+ ++M+ + TY LV GL + R +A +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKARRLRDAVQ 60
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VL+EM+ + P T V+++ LC + +A +EEM+ + + +S+LV +C
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 204/434 (47%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMIG+L ++NR+ E E+ + ++ + + T I Y AG+ +EA SL +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N +L + K K++ A +F + + + N+L+D+LC+ +
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE--MKKDAAPNLSTYNILIDMLCRAGK 392
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + M G +P+ + +I++ LC ++L+EA +MF + K D +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC----AMFEEMDYKVCTPDEI 448
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ L G++ DA ++ EK+L C N S++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSD-------------CRTN---------SIVYT 486
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+LI+ + +N GR +G K+ +M + P L + + +FK G
Sbjct: 487 SLIK--------------NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ + EE + FVP R Y+IL+ GL AG + M +Q GCV + Y
Sbjct: 533 PEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDTRAY 590
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++DG C+ G+ +A ++LEEM + + P V TY +I GL I + EA M EE S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 467 QAKLPDISVWSSLV 480
+ ++ ++SSL+
Sbjct: 651 KRIELNVVIYSSLI 664
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 192/443 (43%), Gaps = 47/443 (10%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+PN R M+ L +S ++ E + ++M C + F + I + G+++
Sbjct: 409 FPNVR----TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+A +++ + +C + + +L+K + E H ++ + +Q LN
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY-KDMINQNCSPDLQLLNTY 523
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
MD + + + +F+E+ + PD SY IL+ GL NE L YSM
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM----K 579
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
++G D Y ++ C GK+ A Q+LE++ KG +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE-------------------- 619
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
P++ +Y ++ L R+ E + +E ++K ++V+Y +
Sbjct: 620 ----------------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K G +DEA ++EE M KG P + +N LL L A A++ + M K++
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQSM-KEL 721
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C N TYGIL++GLC+ +F +A +EM + P +Y +I GL G EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ + +PD + +++++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMI 804
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 181/422 (42%), Gaps = 44/422 (10%)
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
++N++ E +V+ M+ S + T I ++ + ++LF+ + +
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
F TL++ KE ++++A + L + + I N+ +D + + D+A F E
Sbjct: 205 LFTTLIRGFAKEGRVDSA-LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
++ G PD +Y ++ LC RL+EA MF + + Y T++
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVE----MFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK +A +LE R R +G IPS+
Sbjct: 320 SAGKFDEAYSLLE-------------RQR-----------------------AKGSIPSV 343
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L G++ E KV +EM+ K P+L Y + L + G +D A E + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE-LRD 401
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M K P VR NI++ LC + A ++M +V C + T+ L+DGL +
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCSLIDGLGKV 460
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR +A +V E+ML Y LI+ + G++ + ++MI+Q PD+ +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 477 SS 478
++
Sbjct: 521 NT 522
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 143/393 (36%), Gaps = 92/393 (23%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S+I L + R+ + +V ++M C V+ + I+ + G+ + ++K++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
NC Q NT + M K + E +F E+K+R +S ++L+ L
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF------EEIKARRFVPDARSYSILIHGL 562
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------ 209
+ ++ +F M QGC D +Y+I++ G C ++N+A LL
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 210 -------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
Y +F K ++VIY +L+ G+I +A ILE+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI--------------------- 289
+++KGL +L N D INEAL+
Sbjct: 683 LMQKGLTP--------NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 290 ---------------------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+G PS SY+ M L G I E + D + G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
P Y A + L +A + EE +G
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D++L EM GF PS+ + K + E +V++ M K F P Y L+
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM-MRKFKFRPAFSAYTTLIG 176
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+S + + ++M +++G + L+ G ++GR A +L+EM S
Sbjct: 177 AFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ YNV I +GK A + E+ + PD ++S++ +C
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 218/480 (45%), Gaps = 46/480 (9%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ + +++ Q ALK F A ++ YRH+ VY SM+ +LS++ +
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQW-RYRHDPMVYYSMLEVLSKTKLCQGSRR 228
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ MK F+ + +Y+RAGQL +A+ + + + NT + V
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ ++LE A + FL + + + N ++ C R + A+ + ++M +GC PD+
Sbjct: 289 RANRLEKA-LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++R+ E L+ M + G D V Y TL+ L +A+
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKM---AKEHGLVPDQVTYNTLIHMLTKHDHADEALW 404
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L+ KG + K YSA+ L
Sbjct: 405 FLKDAQEKGFRIDK------------------------------------LGYSAIVHAL 428
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
EGR+ E +++EM P +V Y A + + G VD+A ++++ G P
Sbjct: 429 CKEGRMSEAKDLINEMDCP---PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG-HKPN 484
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
Y LL G+C G S A + MS++ N TY +++ GL R+G+ EA V+
Sbjct: 485 TVSYTALLNGMCRTGKSLEA-REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 543
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EM+++ ++P N+L++ LC G+ +EA ++EE +++ ++ +++++ C N
Sbjct: 544 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 603
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 132/354 (37%), Gaps = 66/354 (18%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y +++ + + + E +E+++ + ++ + R G+L+EA
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 540
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + N LL+ + ++ + A F+ C + + ++
Sbjct: 541 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK-FMEECLNKGCAINVVNFTTVIHG 599
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW------ 214
CQ D AL V +M + D +Y L+ L R+ EAT L+ M
Sbjct: 600 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 659
Query: 215 ---------RISQKGSGEDIV--------------IYRTLLFALCDQGKIQDAMQILEKI 251
R Q G +D+V IY ++ LC GK+++A +L K+
Sbjct: 660 PVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKV 719
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
LR ++ D + +L+ E ++ G+P L++Y
Sbjct: 720 LRTASRS-----------------DAKTCYALM-EGYLKKGVP-LSAY------------ 748
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
KV M + P + M E L G VDEA +++ + +G P
Sbjct: 749 -----KVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 797
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 216/474 (45%), Gaps = 15/474 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+TP L ++++ + T++++F + YRH+ VY +IG L + + ++
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQ-NGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVK 127
QMK + K+S+F + +R Y +AG + L + ++C +S+N +L+ +V
Sbjct: 135 IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVS 194
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + A +F ++ + + ++M C D AL + ++M GC P+
Sbjct: 195 GNCHKVAANVFY-DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ L R+NEA LL MF G D + ++ LC +I +A ++
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFL----MGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ ++L +G + C G ++ AK L R P + ++ +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDL----FYRIPKPEIVIFNTLIHGFV 364
Query: 308 NEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + VL +M T G P + Y + + +K+G+V ALEV+ + KG P
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPN 423
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y IL+ G C G A L +MS G N + L+ C++ R EA +
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EM + P V T+N LI GLC + + A+ L +MIS+ + + +++L+
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 204/429 (47%), Gaps = 11/429 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + +RI E +++++M D + + + G+++ A LF + + V
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV-- 354
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
FNTL+ V +L+ A + + + + + N L+ + LAL V
Sbjct: 355 --IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M +GC P+ SY IL+ G C +++EA ++L M S G + V + L+ A
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM----SADGLKPNTVGFNCLISA 468
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C + +I +A++I ++ RKG K + + C + ++I+ A L+ + + G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVA 527
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + G I E K+++EM +G + Y + + L + G VD+A +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+ M++ P+ NIL+ GLC +G AV + K+M + G + T+ L++GLC
Sbjct: 588 EK-MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLC 645
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R GR + + ++ P T+N L+ LC G Y+A + L+E I +P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 475 VWSSLVASV 483
WS L+ S+
Sbjct: 706 TWSILLQSI 714
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 13/442 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I LS+ NR+ E +++++M C F I + ++NEA +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ L+ + K +++AA LF R K I N L+
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVT 365
Query: 164 CRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R D A V +M G PD +Y+ L+ G + + A +L+ M KG
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM----RNKGCK 421
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ C GKI +A +L ++ GLK P + + I A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVE 480
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ E +G P + +++++ L I +L +M ++G + V Y + A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G + EA +++ E + +G+ + + YN L+KGLC AG A +KM + G +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPS 598
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+ IL++GLCR G EA +EM++R P + T+N LI GLC G+ + +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 463 EMISQAKLPDISVWSSLVASVC 484
++ ++ PD +++L++ +C
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLC 680
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+M+ PT+ + +++K C A+ L+ M+K GCV N Y L+ L +
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH-GCVPNSVIYQTLIHSLSKC 265
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R EA ++LEEM + P ET+N +I GLC + EA + M+ + PD +
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 477 SSLVASVC 484
L+ +C
Sbjct: 326 GYLMNGLC 333
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 234/500 (46%), Gaps = 28/500 (5%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I Q++ A +IF A + +P + H Y S+I LS + +
Sbjct: 9 WPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGV 68
Query: 65 KEVIDQMKGDSC--ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ ++ Q+ +S +C D VF + IR Y AG+ A+ F + + F+ + NTL
Sbjct: 69 ESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTL 128
Query: 122 LKEMVKESKLEAAHIL--FLRSC---YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
L V+ + H++ L++C YG V + S N+L+ LC+ + AL VF E
Sbjct: 129 LNVFVQNKRY---HLVGSTLKNCKDKYG--VLPNVFSFNILIKALCKKNDVENALKVFDE 183
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G P+ +Y ++ G + L A +F IS KG D Y L+ C
Sbjct: 184 MPTMGMIPNLVTYTTILGGFVSRGDLVNAE----KVFSEISDKGWLPDATTYTVLMVGYC 239
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
QG++ DA+++++ + G++ + + C + + E A++LI++ L + +PS
Sbjct: 240 KQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGE-ARNLIDDMLDKKFLPS- 297
Query: 297 ASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
++ ID L +G++ + M K P + + L K+G V EA ++ +
Sbjct: 298 STLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFD 357
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E +GT +P++ YN L+ G+C+ G A M ++ C N TY +L+ G +
Sbjct: 358 E-FEQGT-IPSLMTYNTLIAGMCERGELNEAGRLWDDMVEK-RCRPNAFTYNMLIKGFMK 414
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G E R+LEEML P TY +LI GL G + + V + M ++ D
Sbjct: 415 AGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD-VDKVMSMAMASREVDADS 473
Query: 476 WS----SLVASVCCNTADLN 491
W +V ++ C T L+
Sbjct: 474 WDLFLHKIVGNLDCGTGALD 493
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++ + + AL K V+ AL+V +E G +P + Y +L G G+
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMG-MIPNLVTYTTILGGFVSRGDLVN 211
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A ++S + G + + TY +L+ G C+ GR +A +V++ M P TY V+I
Sbjct: 212 AEKVFSEISDK-GWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMI 270
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
C K EA +++M+ + LP ++ ++ +C + N C
Sbjct: 271 DAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACH 319
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 202/415 (48%), Gaps = 15/415 (3%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
D C SVF +++Y+R +++A+S+ + S+N +L ++ +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR--- 184
Query: 134 AHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+I F + + ++S++ + N+L+ C D+AL +F +M+ +GC P+ +Y
Sbjct: 185 -NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ G C R++++ LL SM + KG +++ Y ++ LC +G++++ +L
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSM----ALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ R+G + + + C +G + A + E L G PS+ +Y+++ +
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + + LD+MR +G P+ Y + + G ++EA V+ E M F P+V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE-MNDNGFSPSVVT 417
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ G C G A+ L+ M K+ G + +Y ++ G CR EA RV EM
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + P TY+ LI+G C + EA EEM+ PD +++L+ + C
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 195/400 (48%), Gaps = 9/400 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + AG ++ A++LF + C+ ++NTL+ K K++ L LRS
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL-LRSMALKG 270
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + S N++++ LC+ R V EM+ +G D +Y+ L+KG C + ++A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA- 329
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
M + + G ++ Y +L+ ++C G + AM+ L+++ +GL P R +
Sbjct: 330 ---LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL-CPNERTYTT 385
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + + A ++ E G PS+ +Y+A+ G++ + VL++M+ KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y L+ + VDEAL V + EMV+ P Y+ L++G C+ + A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++M + VG + TY L++ C +G +A ++ EM+ + P V TY+VLI
Sbjct: 505 CDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GL + EA L ++ + +P + +L+ + C N
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN 602
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 23/416 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I R G++ E + +++ ++NTL+K KE A ++
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
S I +L+ +C+ + A+ +M +G P+ +Y L+ G +
Sbjct: 338 RHGLTPSVITYTSLIHS-MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
NEA Y + ++ G +V Y L+ C GK++DA+ +LE + KGL +P
Sbjct: 397 NEA----YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL-SPDVV 451
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ L D++ A + E + +G P +YS++ + R E + +EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P Y A + A +G +++AL+ + EMV+ +P V Y++L+ GL
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQ-LHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVLE 427
+ A L K+ + V + TY L++ G C G EA +V E
Sbjct: 571 TREAKRLLLKLFYE-ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ML +++ P YN++I G C G +A +EM+ L +LV ++
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ GF P ++ Y A L A + E + +EM++ P V YNIL++G C AGN
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDG------------------------------ 412
VA+ KM + GC+ N TY L+DG
Sbjct: 221 IDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 413 -----LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LCR+GR E S VL EM R Y TYN LI+G C G ++A++ EM+
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P + ++SL+ S+ C ++N + L+Q+
Sbjct: 340 GLTPSVITYTSLIHSM-CKAGNMNRAMEFLDQM 371
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 177/426 (41%), Gaps = 28/426 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + ++ + E +DQM+ + + T + +++ G +NEA + + +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N L+ K+E A I L + + S + ++ C+
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDA-IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL V +EM +G PD +Y L++G C RR EA LY R+ G D
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD-LYEEMLRV---GLPPDEF 521
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ A C +G ++ A+Q+ +++ KG+ P + + + N AK L+ +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGV-LPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+PS +Y + + N +E V+ + KGF GM
Sbjct: 581 LFYEESVPSDVTYHTLIENCSN----IEFKSVVSLI--KGFC--------------MKGM 620
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA +V E M+ P YNI++ G C AG+ A K+M K G + + T
Sbjct: 621 MTEADQVF-ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVTV 678
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LV L ++G+ E + V+ +L E VL+ G + L EM
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 467 QAKLPD 472
LP+
Sbjct: 739 DGFLPN 744
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 212/450 (47%), Gaps = 20/450 (4%)
Query: 40 NYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
N R P Y +I L ++++ + E++ +M F + + +AG+
Sbjct: 2 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 61
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQS 153
A SL +++ NC ++NTL+ + K+ ++ A L F+ S + +V +
Sbjct: 62 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDV----VT 117
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
++L D LC+ R D A + +EM GC P+ +Y+ L+ GLC + +A Y +
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA----YELL 173
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ G D+V Y ++ LC +G++ A++++E +L++G + C
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 233
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++ A + E + + +Y ++ R E KV+D +R P + +
Sbjct: 234 GR-VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDV 289
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y A + K+G +DE V E+ +G VP ++ YNI++ GLC G A +L+ M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGC-VPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
GCV + +Y I++DGL + + EA +VL++M+ P TYN L+ C +
Sbjct: 349 -HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+AV L+ MI PD +++L++ +
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 19/397 (4%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEV 147
+A + ++A + + T +FN+++ + K K E AH L R+C
Sbjct: 22 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC----- 76
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N L+ LC+ + D A + E G PD +Y IL GLC R++EA
Sbjct: 77 RPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 136
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M S G ++V Y TL+ LC K + A ++LE ++ G I
Sbjct: 137 LVKEM----SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C +G ++ A ++ L RG PS+ +Y+A+ L GR+ E + EM +K
Sbjct: 193 DGLCKEGR-LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ Y + + K EA +V++ ++GT P + VYN L+ G C G
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDG--IRGT--PYIDVYNALMDGYCKEGRLDEIP 307
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ M+ + GCV N +TY I++DGLC+ G+ EA LE M P V +YN++I G
Sbjct: 308 NVFEDMACR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L K EA L++MI PD +++L+A C
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 214/464 (46%), Gaps = 18/464 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + + A IFKE K + + Y S++ +S+R E +
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKSSRTKEAQ 275
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V+D ++G V+ + Y + G+L+E ++F++++ CV +++N ++ +
Sbjct: 276 KVVDGIRGTP---YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 332
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ A FL S + + S N+++D L + + A V +M G PD
Sbjct: 333 CKHGKVDEA-FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM C + R ++A +L +M + G D V Y TL+ L ++ DA
Sbjct: 392 AVTYNTLMAQFCKEERFDDAVGILKNMI----KAGVDPDNVTYNTLISGLSQTNRLGDAY 447
Query: 246 QILEKILRKG--LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+++ ++LR G + A + ID C +G ++ A L++ G + +Y+
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRL-CKEGC-LKQALLLMDHMTGHGVEANTVTYNIFI 505
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L EGR+ E +L EM T V Y + L K +D A ++ E +
Sbjct: 506 DRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 562
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
T +N+L+ A+ L+ M Q GC + TY +++ LC+ + +A
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDEALTLLELMV-QRGCSPSVITYNMVITCLCKLDKVDKAW 621
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ +EM +R +Y VLI GLC G+ EA+ LEEM S
Sbjct: 622 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 665
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 211/482 (43%), Gaps = 52/482 (10%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYA-------R 92
N R + Y ++I L + + K ++D+ S F + TY+ +
Sbjct: 75 NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVS-------SGFVPDVVTYSILADGLCK 127
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
G+++EA L K +S C ++NTL+ + K SK E A+ L L + +
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL-LETLVSSGFVPDVV 186
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ +++D LC+ R D AL + + M +GC P +Y LM+GLC R++EA H+ M
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246
Query: 213 ------------------FWRISQKGSGEDIV----------IYRTLLFALCDQGKIQDA 244
+ + S+ + +V +Y L+ C +G++ +
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ E + +G P + + I + C G+ ++ A + G +P + SY+ +
Sbjct: 307 PNVFEDMACRGC-VPNIKTYNIVMDGLCKHGK-VDEAFPFLESMHSAGCVPDVVSYNIII 364
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ + E +VLD+M G P V Y +A K+ D+A+ +++ M+K
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN-MIKAGV 423
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEA 422
P YN L+ GL A + +M + GCV + TY ++D LC++G +A
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN-GCVVSACTTYNTIIDRLCKEGCLKQA 482
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+++ M TYN+ I LC G+ EA L EM + L D +++++
Sbjct: 483 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIG 539
Query: 483 VC 484
+C
Sbjct: 540 LC 541
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + R+ E + +M C + + + Y ++ + EA + +
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ +N L+ KE +L E ++ +C G I++ N++MD LC+
Sbjct: 282 RG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC--VPNIKTYNIVMDGLCKHG 336
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D A + M GC PD SY+I++ GL + EA +L M Q G D
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI----QAGIPPDA 392
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ C + + DA+ IL+ +++ G+ P + + + + + A L++
Sbjct: 393 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMH 451
Query: 286 EALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E L G + S + ID L EG + + ++D M G + V Y + L K+
Sbjct: 452 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 511
Query: 345 GMVDEALEVIEEEMVKGTFVPTVR---VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G +DEA ++ E + T+R Y ++ GLC A A ++M G
Sbjct: 512 GRLDEASSLLSE-------MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 564
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
T+ +L+D + R EA +LE M+ R P V TYN++I LC + K +A
Sbjct: 565 TSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+EM + + ++ L+ +C
Sbjct: 625 DEMAVRGIVASSVSYTVLIYGLC 647
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + +Y+ + L + + ++L EM +G P V + + + L K G + A +
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ M + P+ YN L+ GLC N A + + G V + TY IL DGL
Sbjct: 68 LAV-MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS-GFVPDVVTYSILADGL 125
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ GR EA +++EM P + TYN LI GLC K +A LE ++S +PD+
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 474 SVWSSLVASVC 484
++ +V +C
Sbjct: 186 VTYTIIVDGLC 196
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R P V TYN+LI GLC K +A L EM+ + PD ++S++ +C
Sbjct: 4 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLC 56
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 204/434 (47%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMIG+L ++NR+ E E+ + ++ + + T I Y AG+ +EA SL +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N +L + K K++ A +F + + + N+L+D+LC+ +
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE--MKKDAAPNLSTYNILIDMLCRAGK 392
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + M G +P+ + +I++ LC ++L+EA + M +++ D +
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTP----DEI 448
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ L G++ DA +I EK+L C N S++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSD-------------CRTN---------SIVYT 486
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+LI+ + +N GR +G K+ +M + P L + + +FK G
Sbjct: 487 SLIK--------------NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGE 532
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ + EE + FVP R Y+IL+ GL AG + M +Q GCV + Y
Sbjct: 533 PEKGRAMFEE-IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDTRAY 590
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++DG C+ G+ +A ++LEEM + + P V TY +I GL I + EA M EE S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 467 QAKLPDISVWSSLV 480
+ ++ ++SSL+
Sbjct: 651 KRIELNVVIYSSLI 664
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 192/443 (43%), Gaps = 47/443 (10%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+PN R M+ L +S ++ E + +QM C + F + I + G+++
Sbjct: 409 FPNVR----TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+A +++ + +C + + +L+K + E H ++ + +Q LN
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY-KDMVNQNCSPDLQLLNTY 523
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
MD + + + +F+E+ + PD SY IL+ GL NE L YSM
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM----K 579
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
++G D Y ++ C GK+ A Q+LE++ KG +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE-------------------- 619
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
P++ +Y ++ L R+ E + +E ++K ++V+Y +
Sbjct: 620 ----------------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K G +DEA ++EE M KG P V +N LL L A A++ + M K++
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKG-LTPNVYTWNSLLDALVKAEEINEALVCFQSM-KEL 721
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C N TYGIL++GLC+ +F +A +EM + P +Y +I GL G EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ + +PD + +++++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMI 804
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 44/422 (10%)
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
++N++ E +V+ M+ S + T I ++ + ++LF+ + +
Sbjct: 145 KANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
F TL++ KE ++++A + L + + I N+ +D + + D+A F E
Sbjct: 205 LFTTLIRGFAKEGRVDSA-LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
++ G PD +Y ++ LC RL+EA MF + + Y T++
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVE----MFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK +A +LE R R +G IPS+
Sbjct: 320 SAGKFDEAYSLLE-------------RQR-----------------------AKGSIPSV 343
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L G++ E +V +EM+ K P+L Y + L + G +D A E + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFE-LRD 401
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M K P VR NI++ LC + A ++M +V C + T+ L+DGL +
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV-CTPDEITFCSLIDGLGKV 460
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR +A ++ E+ML Y LI+ + G++ + ++M++Q PD+ +
Sbjct: 461 GRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLL 520
Query: 477 SS 478
++
Sbjct: 521 NT 522
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 146/389 (37%), Gaps = 78/389 (20%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S+I L + R+ + ++ ++M C V+ + I+ + G+ + ++K++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
NC Q NT + M K + E +F E+KSR +S ++L+ L
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF------EEIKSRRFVPDARSYSILIHGL 562
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------ 209
+ ++ +F M QGC D +Y+I++ G C ++N+A LL
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 210 -------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
Y +F K ++VIY +L+ G+I +A ILE+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGA-------KSL-------------------- 283
+++KGL P L E+I A K L
Sbjct: 683 LMQKGL-TPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 284 -INEALI-------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
N+A + +G PS SY+ M L G I E + D + G P Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFV 364
A + L +A + EE +G +
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLHI 830
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D++L EM GF PS+ + + K + E +V++ M K F P Y L+
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQN-MRKFKFRPAFSAYTTLIG 176
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+S + + ++M +++G + L+ G ++GR A +L+EM S
Sbjct: 177 AFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ YNV I +GK A + E+ + PD ++S++ +C
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 219/488 (44%), Gaps = 17/488 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV- 67
++ T Q+++ SP A + F A + H+ Y M+ IL + + +
Sbjct: 25 ISKTTFFQVLRFIASPPKAFEFFNWASRN--GFAHDSRSYFMMLDILGRNGNLNIARNFL 82
Query: 68 --IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
I++ S + +D T +R+Y AG NEA+ LF + +FN+LL +
Sbjct: 83 FSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLIL 142
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + AH +F C + V + N+L+ C+ D F+EM C PD
Sbjct: 143 LKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPD 202
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC ++ A +++ M ++ K D+V Y TL+ C + +I +A+
Sbjct: 203 VVTYNTLVDGLCRAGKVRIAHNVVKGMVKKM--KDLSPDVVTYTTLVRGYCMKQEIDEAL 260
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL-IRGGIPSLASYSAMAI 304
+ E+++ +GLK P + + + + + K ++ A+ RG +P +Y+ +
Sbjct: 261 VVFEEMVSRGLK-PNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMN 319
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ G E K+ +M+ P Y + L + G + A ++ ++ + +
Sbjct: 320 AQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILL 379
Query: 365 ------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V YN + LC G + A +++ K+ + +Y L+ G C++G
Sbjct: 380 RDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKK--GTQDPPSYKTLIIGHCKEGT 437
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
F ++L ML R Y P ETY +LI G G+ A LE M+ + LP SV+ S
Sbjct: 438 FEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHS 497
Query: 479 LVASVCCN 486
+++ + N
Sbjct: 498 ILSELLKN 505
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 204/508 (40%), Gaps = 81/508 (15%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKN 105
+ S++ IL + R V D+M G D+ F IR + + ++E FK
Sbjct: 134 TFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKE 193
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW-EVKSRIQSLNLLMDVLCQC 164
+S+FNC ++NTL+ + + K+ AH + ++ + + L+ C
Sbjct: 194 MSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMK 253
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ D AL VF+EM +G P+ +Y+ L+KGLC ++ ++ +L + +G D
Sbjct: 254 QEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGA---VGGRGFVPD 310
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRI---DLCPCND------- 273
Y TL+ A CD G +A+++ +K+ K LK P S + + +LC D
Sbjct: 311 TCTYNTLMNAQCDAGNFDEALKMFKKM--KELKVQPDSATYSVLIRNLCQRGDFERAEQL 368
Query: 274 -----GEDI----EGAKSLIN----------------------EALIRGGIPSLASYSAM 302
EDI +G L+ L++ G SY +
Sbjct: 369 FDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTL 428
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
I EG G K+L M + + P Y + + G A + +E M+K +
Sbjct: 429 IIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLER-MLKSS 487
Query: 363 FVPTVRVYNILLKGL-----CDAGNSAVAVMYLKKMSKQVGCVA---------------- 401
++P V++ +L L S V +M +K+ + +
Sbjct: 488 YLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAF 547
Query: 402 --------NGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
NG + L+ +C++G+ L+A ++L L + + + NV+I GLC +
Sbjct: 548 QIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKM 607
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ EA ++ ++ +S L
Sbjct: 608 KRPLEAFGLYYMLVEKSNHQQLSCLEGL 635
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 237/542 (43%), Gaps = 66/542 (12%)
Query: 6 PRLLTPTY--LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
P L PT+ + +I QKS AL+ F+ A K PN+ H+ Y ++I L R
Sbjct: 8 PSLAVPTHERIVHLILDQKSAPQALQTFEWA-SKLPNFTHSQSTYRALIHKLLTFRRFHT 66
Query: 64 MKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
++ ++D+M K +S+F T IR RA + + + + ++++ + FN++L
Sbjct: 67 VQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSIL 126
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+VKE ++ A + + G ++ + +LM LC R + Q + +G
Sbjct: 127 DVLVKED-IDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGL 185
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYS---------------------------MFWR 215
P+ Y+ L+ LCN+ ++ A L+ + +
Sbjct: 186 KPNVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLLEK 245
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
G D+V ++ LC+ G++ +A++ILE++ KG + + C G+
Sbjct: 246 SFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGK 305
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ L+ E +G +P+ +Y+A+ G + + ++M+T G + V ++
Sbjct: 306 -VKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFD 364
Query: 336 AKLAALFKDGMVDEALEVIE-EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM- 393
+ LF G ++ +++E E +G ++ YN +L GL A+ +L KM
Sbjct: 365 TLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKME 424
Query: 394 ------------------------SKQV-------GCVANGETYGILVDGLCRDGRFLEA 422
+K+V G + + Y L+ G C++G EA
Sbjct: 425 NLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREA 484
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ EM+ Y+P T+N LI G C +GK A+ LE+M+ + +PD +S L+ +
Sbjct: 485 LELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDA 544
Query: 483 VC 484
+C
Sbjct: 545 LC 546
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 187/441 (42%), Gaps = 55/441 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L +NRI E +++ +K + ++ T + G++ A SL +
Sbjct: 156 TYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEI 215
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS-CYGW-------------------- 145
+ N V +FN L+ KE A +L +S G+
Sbjct: 216 KEPNDV----TFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRV 271
Query: 146 ----EVKSRIQSLNLLMDVL---------CQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
E+ R++S ++DV+ C+ + L + +EM+ +GC P+ ++Y+ L
Sbjct: 272 TEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNAL 331
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C L A MF + G + V + TL+ L +G+ +D +ILE +
Sbjct: 332 ISGFCESGMLESA----LDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELME 387
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL-----IRGGIPSLASYSAMAIDLY 307
S + P N K+++NEAL + P S +
Sbjct: 388 ETRGVCGGS------ISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFC 441
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
EG I E +V D+M +G PS ++Y+ + ++G V EALE++ E + G F P
Sbjct: 442 EEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYF-PVA 500
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+N L+ G C G A+ L+ M + GCV + +Y L+D LCR F +A+ +L
Sbjct: 501 STFNALISGFCRLGKDGSALKLLEDMVGR-GCVPDTGSYSPLIDALCRKKSFQKAASLLL 559
Query: 428 EMLIRSYWPCVETYNVLIRGL 448
+M+ P +N L L
Sbjct: 560 QMVENGITPDYLIWNSLFHCL 580
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 212/476 (44%), Gaps = 14/476 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ + +++ Q AL F A ++ Y H+ VY +++ +LS++ +
Sbjct: 159 RSLKPSLVCAVLRSQADERVALNFFYWADRQW-RYSHHPLVYYTLLDVLSKTKLCQGARR 217
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ M E F + +Y+RAG+L A+ + + + NT + +V
Sbjct: 218 VLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLV 277
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K KLE A + FL +K I + N L+ C R + AL + + +GC PD+
Sbjct: 278 KGCKLEKA-LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 336
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC ++++ + L+ M + D V Y TL+ L G DA+
Sbjct: 337 VSYYTVMGFLCKEKKIEQVKCLMEKM---VQDSNLIPDQVTYNTLIHMLSKHGHADDALA 393
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L++ KG K I C G ++ AKSL+ + R P + +Y+A+
Sbjct: 394 FLKEAEDKGFHIDKVGYSAIVHSFCQKGR-MDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEEMVKGTF 363
GRI E K+L +M G P+ V Y A L L G EA E+I EE +
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW----W 508
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y +++ G G + A ++M ++ G +L+ LC++ + +EA
Sbjct: 509 TPNAITYGVVMHGFRREGKLSEACDLTREMVEK-GFFPTPVEINLLIQSLCQNQKVVEAK 567
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ LEE L + V + +I G C IG A+ LE+M K PD +++L
Sbjct: 568 KYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTAL 623
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 193/442 (43%), Gaps = 38/442 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L + +I ++K ++++M DS D V + T I ++ G ++A++ K
Sbjct: 339 YYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 398
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ ++ +++ A L + Y + + ++D C+ R
Sbjct: 399 EDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI-DMYSRSCNPDVVTYTAIVDGFCRLGR 457
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY---SMFW--------- 214
D A + Q+M GC P+ SY L+ GLC+ + EA ++ +W
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGV 517
Query: 215 -------------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ +KG V L+ +LC K+ +A + LE+ L KG
Sbjct: 518 VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 577
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ C G D+E A S++ + + P +Y+A+ L +GR+ E
Sbjct: 578 CAINVVNFTTVIHGFCQIG-DMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEA 636
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++ +M +KG P+ V + + + + G VD+ L ++ + MVK P +YN +++
Sbjct: 637 AELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLL-DRMVKRK--PFRTIYNHVIE 693
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LCD GN A L K+ + + + T +L++ + G L A +V +M R+
Sbjct: 694 KLCDFGNLEEAEKLLGKVLRTASKL-DANTCHVLMESCLKKGVALSAYKVACQMFRRNLT 752
Query: 436 PCVETYNVLIRGLCSIGKQYEA 457
P ++ + + L G EA
Sbjct: 753 PDLKLCEKVTKKLVLDGNLVEA 774
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 222/503 (44%), Gaps = 44/503 (8%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
++ Q AL++F A +K PN+ +Y ++ L S +M+++++ MK CE
Sbjct: 57 LRSQADDSAALRLFNLASKK-PNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCE 115
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFK-NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
S F I +YA+ +E + + + F T +N +L +V + L+ I
Sbjct: 116 MGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEI 175
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK-- 194
+ W +K + + N+L+ LC+ + A+ + ++M G PD +++ +M+
Sbjct: 176 AHAKMSV-WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGY 234
Query: 195 ---------------------------------GLCNDRRLNEATHLLYSMFWRISQKGS 221
G C + R+ +A + + M +Q G
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM---SNQDGF 291
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D + TL+ LC G ++ A++I++ +L++G + + C GE ++ A
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-VKEAV 350
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+++ + R P+ +Y+ + L E ++ E ++ + +KG P + + + + L
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
A+E+ EE KG P YN+L+ LC G A+ LK+M GC
Sbjct: 411 CLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCAR 468
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY L+DG C+ + EA + +EM + TYN LI GLC + +A +
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLM 528
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
++MI + + PD ++SL+ C
Sbjct: 529 DQMIMEGQKPDKFTYNSLLTHFC 551
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 215/446 (48%), Gaps = 25/446 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y M+ +L + N + ++ +M + S F I+ RA QL A+ + +++
Sbjct: 157 YNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR------SCYGWEVKSRIQSLNLLMDVL 161
+ V ++F T+++ ++E L+ A L +R C V S+N+++
Sbjct: 217 SYGLVPDEKTFTTIMQGYIEEGDLDGA--LRIREQMVEFGCSWSNV-----SVNVIVHGF 269
Query: 162 CQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ R + AL+ QEM Q G +PD+ +++ L+ GLC + A ++ M Q+G
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML----QEG 325
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ Y +++ LC G++++A++ L++++ + + + C + + +E A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ-VEEA 384
Query: 281 KSLINEALIRGGIPSLASYSAM--AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
L +G +P + +++++ + L R+ ++ +EMR+KG P Y +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM--ELFEEMRSKGCEPDEFTYNMLI 442
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+L G +DEAL ++++ + G +V YN L+ G C A A +M G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGC-ARSVITYNTLIDGFCKANKIREAEEIFDEMEVH-G 500
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
N TY L+DGLC+ R +AS+++++M++ P TYN L+ C G +A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
++ M S PDI + +L++ +C
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 203/426 (47%), Gaps = 17/426 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++ + E++D M + + + + I + G++ EAV +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C T ++NTL+ + KE+++E A L R + + + N L+ LC R
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A+ +F+EM +GC PD +Y++L+ LC+ +L+EA ++L M G ++
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM----ELSGCARSVI 471
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKS 282
Y TL+ C KI++A +I +++ G+ R+ + DG +E A
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVS-----RNSVTYNTLIDGLCKSRRVEDASQ 526
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ ++ G P +Y+++ G I + ++ M + G P +V Y ++ L
Sbjct: 527 LMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G V+ A +++ +KG + T YN +++GL + A+ ++M +Q +
Sbjct: 587 KAGRVEVASKLLRSIQMKGIAL-TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPD 645
Query: 403 GETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+Y I+ GLC G + EA L E+L + + P + +L GL ++ + E ++ L
Sbjct: 646 AVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME-ETLVKL 704
Query: 462 EEMISQ 467
M+ Q
Sbjct: 705 VNMVMQ 710
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 200/443 (45%), Gaps = 44/443 (9%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAA---- 134
+ F T ++ Y G L+ A+ + + + +F C +W+ S N ++ KE ++E A
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 135 ----------------HILFLRSCYGWEVKSRIQSLNLLM------DV---------LCQ 163
+ L C VK I+ +++++ DV LC+
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ +M + C P+ +Y+ L+ LC + ++ EAT L + + KG
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + +L+ LC + AM++ E++ KG + + + + C+ G+ ++ A ++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNM 457
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + + G S+ +Y+ + +I E +++ DEM G + V Y + L K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V++A +++++ +++G P YN LL C G+ A ++ M+ GC +
Sbjct: 518 SRRVEDASQLMDQMIMEGQ-KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDI 575
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TYG L+ GLC+ GR AS++L + ++ YN +I+GL K EA+ E
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+ Q + +V +V CN
Sbjct: 636 MLEQNEAAPDAVSYRIVFRGLCN 658
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L +S R+ + +++DQM + + + + + + R G + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV 563
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ C ++ TL+ + K ++E A L LRS + + N ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL-LRSIQMKGIALTPHAYNPVIQGLFR 622
Query: 164 CRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCN 198
R++ A+++F+EM Q PD SY I+ +GLCN
Sbjct: 623 KRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCN 658
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 225/506 (44%), Gaps = 49/506 (9%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++Q P AL++ A + ++ + VY ++ L + M+ ++ +M+ + +
Sbjct: 63 LREQSDPEAALRMLNSALAR-EDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQ 121
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNL---SQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+ V + + +YAR + ++AV L N F T FN LL +V+ SKL+
Sbjct: 122 VRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLK-- 179
Query: 135 HILFLRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
L S Y G ++ + +LN L+ LC+ + A+ + +EM G PD ++
Sbjct: 180 ---LLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236
Query: 191 ILMKGLCNDRRLNEATHLLYSM----------------------------FWRISQK--- 219
LM+G + + A + M I Q+
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D V Y T + LC G + A+++++ +L++G + + C +GE ++
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE-LDE 355
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK ++N+ + RG +P +++ + + L ++ R+ E + E+ KG P + + +
Sbjct: 356 AKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILIN 415
Query: 340 ALFKDGMVDEALEV-IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL K G D L + + EEM P YNIL+ LC G A+ L +M G
Sbjct: 416 ALCKVG--DPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESN-G 472
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C + TY ++D LC+ R EA V ++M + T+N LI GLC + +A
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+E+M+ + P+ ++S++ C
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYC 558
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 211/513 (41%), Gaps = 88/513 (17%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ ++ +L E +++ ++ V ++M G + T I+ RA Q+ AV + + +
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ---------SLNLL 157
S +F TL++ ++E +EAA VK+++ ++N+L
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAA----------LRVKAKMMEAGCSPTGVTVNVL 273
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW--- 214
++ C+ R + AL Q+ G PD+ +Y+ + GLC + ++ A ++ M
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 215 ----------------------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++ +G D + TL+ AL Q ++++A+
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM---- 302
+ ++ KGL + + C G+ G + L E G P +Y+ +
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIR-LFEEMKSSGCTPDEVTYNILIDHL 452
Query: 303 --------AIDLYNEG-----------------------RIVEGDKVLDEMRTKGFWPSL 331
A+DL NE RI E ++V D+M +G S
Sbjct: 453 CSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSA 512
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V + + L K +D+A E+IE+ MVK P YN +L C GN A L+
Sbjct: 513 VTFNTLIDGLCKAKRIDDATELIEQ-MVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M+ G + TYG L++GLC+ GR A ++L M I+ P + YN +I+ L
Sbjct: 572 TMTAN-GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 630
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ EM + PD + + S+C
Sbjct: 631 NNLRDALNLFREMTEVGEPPDALTYKIVFRSLC 663
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 164/401 (40%), Gaps = 68/401 (16%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L ++ ++ +V+D M + + + T I ++ G+L+EA + +
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ T +FNTL+ + +++LE A + R + + + N+L++ LC+
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEA-LDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------------- 212
L + +F+EM GC PD +Y+IL+ LC+ +L A LL M
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 213 -----------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
F ++ +G V + TL+ LC +I DA +++E+++++G
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
L+ + I C G +I+ A ++ G + +Y + L GR
Sbjct: 543 LQPNNITYNSILTHYCKQG-NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE------------------- 356
K+L MR KG P+ Y + +LF+ + +AL + E
Sbjct: 602 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRS 661
Query: 357 ----------------EMVKGTFVPTVRVYNILLKGLCDAG 381
EMV F+P + +L +GL + G
Sbjct: 662 LCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 7/298 (2%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+ ++MK C + + I G+L A+ L + C T ++NT++ +
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K+ ++E A +F + +S + + N L+D LC+ +R D A + ++M +G P+
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAV-TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ ++ C + +A +L +M + G D+V Y TL+ LC G+ Q A++
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETM----TANGFEIDVVTYGTLINGLCKAGRTQVALK 603
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+L + KG++ P + + + ++ A +L E G P +Y + L
Sbjct: 604 LLRGMRIKGIR-PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSL 662
Query: 307 -YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G I E L EM KGF P + L GM D + IE + K F
Sbjct: 663 CRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 316 DKVLDEMR--TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
D VL+++ T G V++ L L +G + LE + EM P V N L
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLV-EGSKLKLLESVYNEMTGRGIQPDVVTLNTL 203
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+K LC A AV+ L++MS G + T+ L+ G +G A RV +M+
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSH-GVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P T NVLI G C +G+ +A+ ++++ I+ PD +++ V +C N
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQN 315
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 25/489 (5%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ T + Q ++ K P L+ F K + H + M+ L + + + +
Sbjct: 69 LSRTTVLQTLRLIKVPADGLRFFDWVYNK--GFSHKEQSFFLMLEFLGRARNLNAARNFL 126
Query: 69 DQMKGDSCEC---KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ S C +D F + IR+Y AG E+V+LF+ + + +FN+LL +
Sbjct: 127 FSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSIL 186
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+K + AH +F +R YG V + N L+ C+ D A +F+EM+ C
Sbjct: 187 LKRGRTGMAHDMFDEMRRTYG--VTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCN 244
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ GLC ++ A +LL M + + +IV Y TLL C + +I +
Sbjct: 245 PDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKAT--AVHPNIVSYTTLLRGYCMKQEIDE 302
Query: 244 AMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+ + ++L +GLK P + + L + ++I+G LI P +++
Sbjct: 303 ALLVFHEMLTRGLK-PNAVTYNTLIKGLSEAHRYDEIKGF--LIGGDAFTTFSPDACTFN 359
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEE 356
+ + G + KV EM P Y + L D+A E+ E+
Sbjct: 360 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEK 419
Query: 357 EMV--KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E++ K P YN++ + LC G + A +++ K+ + +Y L+ GLC
Sbjct: 420 EVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKR--GAQDPSSYRTLITGLC 477
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+G+F A +L ML R + P ETY VLI GL IG+ A L+ M+ + LP +
Sbjct: 478 REGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 537
Query: 475 VWSSLVASV 483
+ S++A +
Sbjct: 538 TFHSVLAEL 546
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 189/456 (41%), Gaps = 38/456 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-- 82
A IFKE + Y N V Y ++I L + ++ +++ M + ++
Sbjct: 231 AFTIFKEMEL----YSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVS 286
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ T +R Y +++EA+ +F + ++NTL+K + + + + +
Sbjct: 287 YTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGD 346
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ N+L+ C D A+ VFQEM +PD SY +L++ LC
Sbjct: 347 AFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEF 406
Query: 203 NEATHLLYSMFWRISQKGSGE--DIVIYRTLLFA-LCDQGKIQDAMQILEKILRKGLKAP 259
++A L +F + G E + L+F LC GK + A ++ +++++G + P
Sbjct: 407 DKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP 466
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
S R I C +G+ + A L+ L R +P +Y + L G + L
Sbjct: 467 SSYRTLIT-GLCREGK-FKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTL 524
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGTFVPTVRVYNILLKG 376
M + P + + LA L K +++ L V+ E+ ++ NI
Sbjct: 525 QRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQ---------NI---- 571
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVA-----NGETYGI--LVDGLCRDGRFLEASRVLEEM 429
D AV +++ ++ + NG + L+D LC + + L+A ++
Sbjct: 572 --DLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFC 629
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
L +S ++T N +I GLC + EA E++
Sbjct: 630 LEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELV 665
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 135/343 (39%), Gaps = 76/343 (22%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G +S+ ++++ L R LN A + L+S+ R + +D + +L+ + + G
Sbjct: 97 KGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQD-RYFNSLIRSYGNAG 155
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
Q+++ + + + + G+ PS+ ++
Sbjct: 156 LFQESVNLFQTMKKMGIS------------------------------------PSVLTF 179
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMR-TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+++ L GR + DEMR T G P + ++ K+ MVD+A + +E M
Sbjct: 180 NSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKE-M 238
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETYGILVDGLCRDG 417
+ P V YN ++ GLC AG +A L M K+ V N +Y L+ G C
Sbjct: 239 ELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQ 298
Query: 418 RFLEASRVLEEMLIR------------------------------------SYWPCVETY 441
EA V EML R ++ P T+
Sbjct: 299 EIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTF 358
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N+LI+ C G A+ +EM++ PD + +S L+ ++C
Sbjct: 359 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 401
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 215/481 (44%), Gaps = 43/481 (8%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R R L P + +++ Q AL F A ++ YRH+ VY M+ +LS++
Sbjct: 96 RLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQW-RYRHDPIVYYMMLQVLSKTKLCQG 154
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ V+ M + FA + +Y+RAG+L A+ + + + NT +
Sbjct: 155 ARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIH 214
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+V +KLE A + FL + + + N L+ C + + A+ + EM F+GC
Sbjct: 215 VLVMANKLEKA-LRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCP 273
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD+ SY+ +M LC D+R+ E +L+ M + D V Y TL+ L G +
Sbjct: 274 PDKVSYYTVMGFLCQDKRIKEVRNLMEKM---VKDNKLFPDQVTYNTLVHMLSKHGHADE 330
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A++ L + +G + K I C G ++ AK ++NE + +G P + +Y+A+
Sbjct: 331 ALEFLRETEERGFQVDKVGYSAIVNSFCMQGR-MDRAKEIVNEMITKGCSPDVVTYTAVV 389
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L G++ E K+L +M G P+ V Y A
Sbjct: 390 NGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA--------------------------- 422
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
LL GLC GNS A + S++ N TY +++ GL R+G+ EA
Sbjct: 423 ---------LLNGLCQHGNSLEA-REMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEAC 472
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V+ EML + ++P N+LI+ LC K EA ++EE +++ + +++++
Sbjct: 473 DVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGF 532
Query: 484 C 484
C
Sbjct: 533 C 533
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 195/423 (46%), Gaps = 13/423 (3%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+ I +L +N++ + +++M+ + I+ Y Q+ A+ L +
Sbjct: 211 TAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFK 270
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C S+ T++ + ++ +++ L + ++ + N L+ +L + +D
Sbjct: 271 GCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADE 330
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL +E + +G D+ Y ++ C R++ A ++ M KG D+V Y
Sbjct: 331 ALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMI----TKGCSPDVVTYT 386
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ LC GK+++A ++L+++ + G K + C G +E A+ ++N +
Sbjct: 387 AVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLE-AREMMNTSEE 445
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P+ +YS + L EG++ E V+ EM TKGF+P+ V + +L + ++E
Sbjct: 446 DWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNE 505
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---SKQVGCVANGETY 406
A + +EE + +G V V + ++ G C + N A+ L M +K V T+
Sbjct: 506 AKKFMEECLNRGCAVNAVN-FTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAV----TF 560
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++D L + GR EA+ +ML + P TY +I C +G+ E + L +M+S
Sbjct: 561 TAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLS 620
Query: 467 QAK 469
++K
Sbjct: 621 RSK 623
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 199/408 (48%), Gaps = 20/408 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLR 140
F T I+ GQ+ +A LF + ++ Q S+ TL+ + K + AA L L+
Sbjct: 157 TFTTLIKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL-LQ 214
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G V+ + N ++D +C+ + + A +F EM +G PD +Y L+ G C
Sbjct: 215 RVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILG 274
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+LN+A L F ++ + D+ + L+ A C GK+++ + + ++++G+K
Sbjct: 275 KLNDAIDL----FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP-- 328
Query: 261 SRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEG 315
+ + DG +++ AKS+ N + +GG+ P + SYS M + E
Sbjct: 329 ---NFVTYNSLMDGYCLVKEVNKAKSIFN-TMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM K P +V Y + + L K G + AL+++++ +G PT+R YN +L
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV-PPTIRTYNSILD 443
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC A+ L K+ K G N TY IL+ GLC+ G+ +A +V E +L++ +
Sbjct: 444 ALCKIHQVDKAIALLTKL-KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V+TY ++I+G C G EA+ L +M +PD + ++ S+
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 203/454 (44%), Gaps = 46/454 (10%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+++ T+ +++AVSLF L + N FN +L +VK +L+L
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHT--VLYLSQK 110
Query: 143 YGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ +K + + N+L++ CQ A VF ++ G PD ++ L+KGLC +
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A + ++ G D + Y TL+ LC G+ + A+ +L+++ L P
Sbjct: 171 IQQA----FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGNLVQPNV 225
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLYN- 308
+ + + + A L +E + +G P + +YSA+ AIDL+N
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285
Query: 309 ----------------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G++ EG V D M +G P+ V Y + +
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A + I M +G P ++ Y+I++ G C A+ K+M ++ + + TY
Sbjct: 346 VNKA-KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTY 403
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGL + GR A +++++M R P + TYN ++ LC I + +A+ L ++
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ P++ +S L+ + C + L RK E L
Sbjct: 464 KGIQPNMYTYSILIKGL-CQSGKLEDARKVFEGL 496
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 183/398 (45%), Gaps = 8/398 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + G + A S+F + + V T +F TL+K + + +++ A LF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA-FLFHDKVVALG 185
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S L+ LC+ + AL + Q +D P+ Y+ ++ +C + +NEA
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA- 244
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +F + KG D+V Y L+ C GK+ DA+ + K++ + +K + +
Sbjct: 245 ---FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C DG+ EG K++ + + +G P+ +Y+++ + + + + M G
Sbjct: 302 VNAFCKDGKMKEG-KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + K DEA+ + +E M + +P V Y+ L+ GL +G + A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKE-MHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ + +M + G TY ++D LC+ + +A +L ++ + P + TY++LI+
Sbjct: 420 LQLVDQMHDR-GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIK 478
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A E ++ + ++ ++ ++ C
Sbjct: 479 GLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 173/393 (44%), Gaps = 43/393 (10%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + + + E ++ +M ++ I + G+LN+A+ LF
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ N +FN L+ K+ K++ +F +K + N LMD C
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF-DMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A +F M G PD +SY I++ G C ++ +EA +L F + +K
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL----FKEMHRKNIIP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y +L+ L G+I A+Q+++++ +G+
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP-------------------------- 432
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+++ L ++ + +L +++ KG P++ Y + L +
Sbjct: 433 ----------PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +++A +V E +VKG + V Y I+++G C G A+ L KM GC+ +
Sbjct: 483 SGKLEDARKVFEGLLVKGHNL-NVDTYTIMIQGFCVEGLFNEALALLSKMEDN-GCIPDA 540
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
+TY I++ L + A ++L EM+ R P
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ +FKE K N + Y+S+I LS+S RI+ +++DQM + +
Sbjct: 384 AMNLFKEMHRK--NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + Q+++A++L L +++ L+K + + KLE A +F G
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF----EGLL 497
Query: 147 VKSR---IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
VK + + +++ C + AL + +M+ GC PD ++Y I++ L +
Sbjct: 498 VKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557
Query: 204 EATHLLYSMFWR 215
A LL M R
Sbjct: 558 MAEKLLREMIAR 569
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 208/445 (46%), Gaps = 10/445 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + + + AG +EAV L
Sbjct: 271 NSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + CV Q+F L+ + ++ K E A L+ + V + + + N L++ LC
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV-TYNALINQLCV 389
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + A +F+ M G P ++Y+ ++K C + +A +F ++ + GS
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM----VIFDKMLKAGSSP 445
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+++ Y TL++ C QG + +AM++LE + GLK P + + + + G +E A SL
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK-PDAWTYTELISGFSRGGKLEHATSL 504
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G P+ +Y+A+ +N ++ + + +M G PS Y ++ K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E +MVK +P V Y + GLC G + +A +M K+ N
Sbjct: 565 TNSISEA-ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR-NYFPNL 622
Query: 404 ETYGILVDGLCRDGRFLEAS--RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+ GLC++GR +A +L + P V+TY L++GLC G+ YEA +
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 462 EEMISQAKLPDISVWSSLVASVCCN 486
M + P ++ +L+ C N
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKN 707
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 220/474 (46%), Gaps = 27/474 (5%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFK-EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P ++ I++ K+ + L+ F ++ K+ ++H+ + SM+ NR+ V
Sbjct: 76 LKPHHVVNILQTHKNTDSVLRFFFWISRRKF--FKHDMSCFVSML------NRL-----V 122
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMV 126
D++ + D V I++ G++ ++ +T SF TLL ++
Sbjct: 123 RDRLFAPA----DHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLG 178
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K ++ A ++++ ++ + + N ++++LC+ R A + + YP+
Sbjct: 179 KFDMVDLARDMYIK-MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNA 237
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ G C + L+ L ++MF R+ + G + V Y TL+ LC +G++++AM
Sbjct: 238 FTYTSLILGHCRNHNLD----LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+LE++++KG++ P + I L D A L+ + RG +P++ +++A+ L
Sbjct: 294 MLEEMVQKGIE-PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+G+ + +M G P+ V Y A + L +G + A + + + G+ +P+
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS-LPS 411
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ YN ++K C G+ A++ KM K G N TY L+ G C+ G A R+L
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E M P TY LI G GK A M+ P+ +++++
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M+ ++ G ++ + T++ LC +G++Q+A I+ I R + L C
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ +++ A ++ + + G P+ +YS + L +EGR+ E +L+EM KG P++
Sbjct: 249 RN-HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y L +L G EA+E++ + +G VP ++ + L+ GL G +A+
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGC-VPNIQTFTALISGLSRDGKFEIAIGLYH 366
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
KM G V TY L++ LC +GRF A + + ML P +TYN +I+ C +
Sbjct: 367 KMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
G +A++ ++M+ P++ +++L+ C +LN + LE
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY-CKQGNLNNAMRLLE 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMA 303
+ +L +++R L AP + + C + +++ ++E + +L S++ +
Sbjct: 115 VSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL 174
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
I L + + +M G PSL+ + + L K G V EA ++I + +
Sbjct: 175 IQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA-KLIMSHIFRYDA 233
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y L+ G C N +A +M K GC N TY L++GLC +GR EA
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+LEEM+ + P V TY + + LC G EAV L +M + +P+I +++L++ +
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 155/363 (42%), Gaps = 41/363 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I S ++ + M + I Y ++++A++LF +
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +Q++N ++ K + + A F + + + +D LC+ R
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAEN-FCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ LA +F EM+ + +P+ +Y L+ GLC + R +A +Y++ R++ G ++
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE--MYNLLARLTHYGCEPNVD 660
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC +G+ +A Q++ + +KGL+ P +R
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ-PSEEIYR--------------------- 698
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
AL+ G +L SA+ I M T GF L Y+A + AL K+
Sbjct: 699 ALLIGECKNLKVESALNI--------------FYSMDTLGFQLHLSDYKALICALCKENF 744
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++EA + I + M++ + V+ +LL GL G + + + L M + C N +TY
Sbjct: 745 IEEA-QCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESR-NCTLNFQTY 802
Query: 407 GIL 409
+L
Sbjct: 803 VML 805
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 167/407 (41%), Gaps = 45/407 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + +++ MKG+ + + I ++R G+L A SLF +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ ++ +K++ A LF + + S Q+ N+++ +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS-QTYNVMISGFSKTNS 567
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + +M QG P+ +Y + GLC + R T L + +F + ++ ++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR----TGLAFKIFHEMEKRNYFPNLY 623
Query: 227 IYRTLLFALCDQGKIQDA--MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
Y +L++ LC +G+ +DA +L ++ G +
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCE--------------------------- 656
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
P++ +Y+ + L EGR E D+++ M+ KG PS +Y A L K+
Sbjct: 657 ---------PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
V+ AL + G F + Y L+ LC A + M ++ ++
Sbjct: 708 LKVESALNIFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEK-HWNSDEV 765
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+ +L+DGL ++G ++L M R+ +TY +L R L ++
Sbjct: 766 VWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSAL 812
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 204/460 (44%), Gaps = 45/460 (9%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++ P A++ F A E+ Y+H+ Y ++ IL +S +V + C
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQ-DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCS 59
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
F IR +AGQ A+ + L +F+ FN L+ + K+
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGN------- 112
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
D A+ +F+ M+ P+ +Y+ ++ GLC
Sbjct: 113 -----------------------------PDQAVKLFENMESSRVKPEIVTYNTVISGLC 143
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
L +A LL M + + S DIV Y TL+ A +I++A EK+ G+
Sbjct: 144 KSGNLEKARELLEEMIRKGGK--SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C DG D+E A +++ + G +P + +Y+++ L G++VE +
Sbjct: 202 PDVLTCNILVSGICKDG-DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L M P LV + L K GM+ ALEV+ EEM + +P V Y IL+ GL
Sbjct: 261 ILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVL-EEMCRENILPDVITYTILVNGL 316
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G VA L+++ +Q G + + Y LVDGLC+ G EA ++++EM +R
Sbjct: 317 CRVGQVQVAFYLLEEIVRQ-GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
V Y+ L+ G C G ++A L EM+S +P + ++
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYN 415
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 13/356 (3%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + S N L+D+L + V++++ GC P+ ++ IL++G C + A
Sbjct: 24 KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L ++ + D+ I+ L+ L G A+++ E + +K + +
Sbjct: 84 FLRAL----DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 268 LCPCNDGEDIEGAKSLINEALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
C G ++E A+ L+ E + +GG P + +Y+ + Y RI E ++M+
Sbjct: 140 SGLCKSG-NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P ++ ++ + KDG V+EALE+++ + G VP V YN ++ LC AG
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGP-VPDVITYNSIIHALCVAGKVVE 257
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A LK MS C + T+ L+DG C+ G A VLEEM + P V TY +L+
Sbjct: 258 AAEILKTMS----CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 313
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
GLC +G+ A LEE++ Q +PD+ ++SLV + C + ++ K ++++S
Sbjct: 314 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL-CKSGEIEEAHKLVKEMS 368
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 211/468 (45%), Gaps = 19/468 (4%)
Query: 20 KQKSPLTALKIFK--EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM--KGDS 75
K +P A+K+F+ E+ P Y ++I L +S + + +E++++M KG
Sbjct: 109 KDGNPDQAVKLFENMESSRVKPEI----VTYNTVISGLCKSGNLEKARELLEEMIRKGGK 164
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
+ T I + RA ++ EA + + + + N L+ + K+ +E A
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ V I + N ++ LC + A + + M C PD +++ L+ G
Sbjct: 225 EILDGMKLAGPVPDVI-TYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDG 280
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C L A +L M ++ D++ Y L+ LC G++Q A +LE+I+R+G
Sbjct: 281 FCKAGMLPRALEVLEEM----CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ C GE IE A L+ E +RG + YS++ G + +
Sbjct: 337 YIPDVIAYTSLVDGLCKSGE-IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++L EM + P L Y L L KDG + +A+ +I + + +G +VP V YN L+
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG-YVPDVVTYNTLID 454
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC A A +M+ + GC N T G +V GLCR GR +A ++ EM + +
Sbjct: 455 GLCKANRVREACDLADEMASR-GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P V Y LI GLC + +A M L+ M Q D + L+ S+
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSM 561
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 157/377 (41%), Gaps = 56/377 (14%)
Query: 32 KEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+EA E + GPV Y S+I L + ++ E E++ M SC F T
Sbjct: 221 EEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTL 277
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCY 143
+ + +AG L A+ + + + + N + ++ L+ + + +++ A L +R Y
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC--------------------- 182
+V + L+D LC+ + A + +EM +GC
Sbjct: 338 IPDVIAYTS----LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393
Query: 183 --------------YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
P +Y+I++ GL D +++A L+ + R G D+V Y
Sbjct: 394 KAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR----GYVPDVVTY 449
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ LC ++++A + +++ +G + C G ++ A SL+ E
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGR-VDDAWSLVVEMS 508
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ Y+++ L R+ + VLD MR +G Y + ++ G V
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568
Query: 349 EALEVIEEEMVKGTFVP 365
EA+ + +E + +G F+P
Sbjct: 569 EAMAMYDEMVARG-FLP 584
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+A+ + +Q G + +Y L+D L + G +V +++L P + T+ +L
Sbjct: 9 LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
IRG C G+ A+ +L + + PD+ +++ L+
Sbjct: 69 IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLI 104
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 163/340 (47%), Gaps = 7/340 (2%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V + SLN+L++ LC+ D A+ + +M G +P +++ L+ GLCN+ ++ E
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L M R G +++ Y T++ LC G A+ + +K+ + G K +
Sbjct: 177 AVELFNEMVRR----GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C D + A ++E L RG P++ +Y+ M G++ E ++ EM
Sbjct: 233 TIIDSLCKD-RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG 291
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P V + L K+GMV EA V E KG P + YN L+ G C
Sbjct: 292 RDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV-EPNISTYNALMDGYCLQRLMN 350
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A + M +Q GC +Y IL++G C+ R EA +L EM ++ P TY+ L
Sbjct: 351 EAKKVFEIMIRQ-GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++GLC G+ EA+ +EM S LP++ +S L+ C
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 18/403 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + ++A+ Q + VSL + F + S N L+ + + + ++ A + L
Sbjct: 91 FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFA-VSILGKM 149
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + N L++ LC + A+ +F EM +G P+ SY+ ++ GLC
Sbjct: 150 FKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN- 208
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
T + +F ++ Q G D+V Y T++ +LC + DAM+ L ++L +G+
Sbjct: 209 ---TSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C G+ + A L E + R +P + + + L EG + E V + M
Sbjct: 266 YNCMVHGFCILGQ-LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC---- 378
KG P++ Y A + +++EA +V E M++ P V YNIL+ G C
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI-MIRQGCAPGVHSYNILINGFCKSRR 383
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D S +A MY K ++ TY L+ GLC+ GR EA + +EM P
Sbjct: 384 MDEAKSLLAEMYHKALNPDT------VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPN 437
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ TY++L+ G C G EA+ L+ M + P+I + L+
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 199/434 (45%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L +I E E+ ++M E + T I + G + AV +FK +
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++NT++ + K+ + A + FL + + + N ++ C +
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDA-MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F+EM + PD + IL+ GLC + ++EA + F +++KG +I
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLV----FETMTEKGVEPNIS 334
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C Q + +A ++ E ++R+G AP + I + ++ AKSL+ E
Sbjct: 335 TYNALMDGYCLQRLMNEAKKVFEIMIRQGC-APGVHSYNILINGFCKSRRMDEAKSLLAE 393
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P +YS + L GR E + EM + G P+LV Y L K G
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEAL++++ M + P + + IL++G+ AG VA K+ G TY
Sbjct: 454 LDEALKLLKS-MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD-GIRPTIRTY 511
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++ GL ++G EA + +M + P +YNV+I+G A+ ++EM+
Sbjct: 512 TVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVG 571
Query: 467 QAKLPDISVWSSLV 480
+ ++S + L+
Sbjct: 572 KRFSANLSTFQMLL 585
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 20/400 (5%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GW 145
I R ++ AVS+ + + +FN L+ + E K++ A LF G
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
E + S N +++ LC+ + +A+ VF++M+ GC PD +Y+ ++ LC DR +N+A
Sbjct: 190 E--PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M R G ++ Y ++ C G++ +A ++ ++++ + + P +
Sbjct: 248 MEFLSEMLDR----GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV-MPDT---- 298
Query: 266 IDLCPCNDGEDIEGAKS---LINEALIRGGI-PSLASYSAMAIDLYNEGRIV-EGDKVLD 320
+ L DG EG S L+ E + G+ P++++Y+A+ +D Y R++ E KV +
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL-MDGYCLQRLMNEAKKVFE 357
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M +G P + Y + K +DEA ++ E M P Y+ L++GLC
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAE-MYHKALNPDTVTYSTLMQGLCQF 416
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ K+M G + N TY IL+DG C+ G EA ++L+ M + P +
Sbjct: 417 GRPKEALNIFKEMC-SYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +LI G+ GK A ++ + P I ++ ++
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 216/479 (45%), Gaps = 18/479 (3%)
Query: 9 LTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
LTP Q+ K + PL T++++F+ A + Y H +I L ++
Sbjct: 61 LTPISPFQLCKLLELPLDIPTSMELFQRAGAQ-KGYSHTFDACYLLIDKLGAVGDFKVIE 119
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKE 124
+++ QMK + K+S+F ++ Y +AG +A L ++ ++C +S+N +L
Sbjct: 120 KLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDI 179
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V A +F V + + ++M LC D A + ++M GC P
Sbjct: 180 LVDGDCPRVAPNVF-YDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVP 238
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ Y L+ LC + R++EA LL MF + D+ + ++ LC G+I +A
Sbjct: 239 NSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP----DVQTFNDVIHGLCRAGRIHEA 294
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++L+++L +G + C G+ ++ A++L+N+ P+ Y+ +
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ-VDEARALLNKI----PNPNTVLYNTLIS 349
Query: 305 DLYNEGRIVEG-DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
GR E D + + M G+ P + + L K G + ALE++ EMV F
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL-NEMVAKRF 408
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y IL+ G C G A + MS + G N Y L+ LC+DG EA
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAK-GLSLNTVGYNCLICALCKDGNIEEAL 467
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ EM + P + T+N LI GLC K EA+ +M + + + +++LV +
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 209/468 (44%), Gaps = 38/468 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I L E+NR++E ++++ M CE F I RAG+++EA L
Sbjct: 239 NSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLL 298
Query: 104 -------------------KNLSQFNCVNWTQS------------FNTLLKEMVKESKLE 132
L + V+ ++ +NTL+ V + E
Sbjct: 299 DRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFE 358
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + N+++D L + AL + EM + P+ +Y IL
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C RL EA ++ SM S KG + V Y L+ ALC G I++A+Q+ ++
Sbjct: 419 INGFCKQGRLEEAAEIVNSM----SAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG K + + C + +E A SL ++ + G I + +Y+ + I
Sbjct: 475 GKGCKPDIYTFNSLINGLCKN-HKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ K++DEM +G + Y + AL K G V++ L + EE + KG F PT+ NI
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF-PTIISCNI 592
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ GLC G A+ +L+ M + G + TY L++GLC+ G EAS + ++
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHR-GLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P TYN LI C G +A + L + + +P+ WS L+
Sbjct: 652 GIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 144/360 (40%), Gaps = 52/360 (14%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K+ ++AL++ E K + N Y +I + R+ E E+++ M
Sbjct: 389 KKGYLVSALELLNEMVAK--RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----H 135
+ I + G + EA+ LF +S C +FN+L+ + K K+E A H
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+FL V + + N L+ A + EM F+GC D +Y+ L+K
Sbjct: 507 DMFLEG-----VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + + L M KG I+ L+ LC GK+ DA++ L+ ++ +G
Sbjct: 562 LCKTGAVEKGLGLFEEMLG----KGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
L DI SLIN L G + E
Sbjct: 618 LTP-----------------DIVTYNSLIN-------------------GLCKMGHVQEA 641
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ ++++++G P + Y ++ +GM ++A ++ + + G F+P ++IL+
Sbjct: 642 SNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG-FIPNEVTWSILIN 700
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 208/445 (46%), Gaps = 10/445 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + + + AG +EAV L
Sbjct: 271 NSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + CV Q+F L+ + ++ K E A L+ + V + + + N L++ LC
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV-TYNALINQLCV 389
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + A +F+ M G P ++Y+ ++K C + +A +F ++ + GS
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM----VIFDKMLKAGSSP 445
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+++ Y TL++ C QG + +AM++LE + GLK P + + + + G +E A SL
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK-PDAWTYTELISGFSRGGKLEHATSL 504
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G P+ +Y+A+ +N ++ + + +M G PS Y ++ K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E +MVK +P V Y + GLC G + +A +M K+ N
Sbjct: 565 TNSISEA-ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR-NYFPNL 622
Query: 404 ETYGILVDGLCRDGRFLEAS--RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+ GLC++GR +A +L + P V+TY L++GLC G+ YEA +
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLV 682
Query: 462 EEMISQAKLPDISVWSSLVASVCCN 486
M + P ++ +L+ C N
Sbjct: 683 VSMQKKGLQPSEEIYRALLIGECKN 707
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 220/474 (46%), Gaps = 27/474 (5%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFK-EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P ++ I++ K+ + L+ F ++ K+ ++H+ + SM+ NR+ V
Sbjct: 76 LKPHHVVNILQTHKNTDSVLRFFFWISRRKF--FKHDMSCFVSML------NRL-----V 122
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMV 126
D++ + D V I++ G++ ++ +T SF TLL ++
Sbjct: 123 RDRLFAPA----DHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLG 178
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K ++ A ++++ ++ + + N ++++LC+ R A + + YP+
Sbjct: 179 KFDMVDLARDMYIK-MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNA 237
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ G C + L+ L ++MF R+ + G + V Y TL+ LC +G++++AM
Sbjct: 238 FTYTSLILGHCRNHNLD----LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+LE++++KG++ P + I L D A L+ + RG +P++ +++A+ L
Sbjct: 294 MLEEMVQKGIE-PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+G+ + +M G P+ V Y A + L +G + A + + + G+ +P+
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS-LPS 411
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ YN ++K C G+ A++ KM K G N TY L+ G C+ G A R+L
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E M P TY LI G GK A M+ P+ +++++
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M+ ++ G ++ + T++ LC +G++Q+A I+ I R + L C
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ +++ A ++ + + G P+ +YS + L +EGR+ E +L+EM KG P++
Sbjct: 249 RN-HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y L +L G EA+E++ + +G VP ++ + L+ GL G +A+
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGC-VPNIQTFTALISGLSRDGKFEIAIGLYH 366
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
KM G V TY L++ LC +GRF A + + ML P +TYN +I+ C +
Sbjct: 367 KMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
G +A++ ++M+ P++ +++L+ C +LN + LE
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY-CKQGNLNNAMRLLE 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMA 303
+ +L +++R L AP + + C + +++ ++E + +L S++ +
Sbjct: 115 VSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL 174
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
I L + + +M G PSL+ + + L K G V EA ++I + +
Sbjct: 175 IQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA-KLIMSHIFRYDA 233
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y L+ G C N +A +M K GC N TY L++GLC +GR EA
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD-GCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+LEEM+ + P V TY + + LC G EAV L +M + +P+I +++L++ +
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 41/363 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I S ++ + M + I Y ++++A++LF +
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +Q++N ++ K + + A F + + + +D LC+ R
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAEN-FCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ LA +F EM+ + +P+ +Y L+ GLC + R +A +Y++ R++ G ++
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE--MYNLLARLTHYGCEPNVD 660
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC +G+ +A Q++ + +KGL+ P +R
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ-PSEEIYR--------------------- 698
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
AL+ G +L SA+ I M T GF L Y+A + AL K+
Sbjct: 699 ALLIGECKNLKVESALNI--------------FYSMDTLGFQLHLSDYKALICALCKENF 744
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++EA + I + M++ + + +LL GL G + + + L M + C N +TY
Sbjct: 745 IEEA-QCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESR-NCTLNFQTY 802
Query: 407 GIL 409
+L
Sbjct: 803 VML 805
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 167/407 (41%), Gaps = 45/407 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + +++ MKG+ + + I ++R G+L A SLF +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ ++ +K++ A LF + + S Q+ N+++ +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS-QTYNVMISGFSKTNS 567
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + +M QG P+ +Y + GLC + R T L + +F + ++ ++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR----TGLAFKIFHEMEKRNYFPNLY 623
Query: 227 IYRTLLFALCDQGKIQDA--MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
Y +L++ LC +G+ +DA +L ++ G +
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCE--------------------------- 656
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
P++ +Y+ + L EGR E D+++ M+ KG PS +Y A L K+
Sbjct: 657 ---------PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
V+ AL + G F + Y L+ LC A + M ++ ++
Sbjct: 708 LKVESALNIFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEK-HWNSDEV 765
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+ +L+DGL ++G ++L M R+ +TY +L R L ++
Sbjct: 766 AWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSAL 812
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 17/345 (4%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V + SLN+L++ LC+ D ++ V +M G +PD +++ L+ GLCN+ ++ E
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L F + ++G +++ Y T++ LC G A+ + +K+ + G K
Sbjct: 182 AVEL----FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYS 237
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C D + A ++E + RG P++ +Y+++ N G++ E ++ EM
Sbjct: 238 TIIDSLCKD-RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----D 379
+ P+ V + + L K+GMV EA V E KG P + YN L+ G C +
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV-EPDISTYNALMDGYCLQRLMN 355
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+M K GC +Y IL++G C+ R EA +L EM ++ P
Sbjct: 356 EAKKVFEIMIRK------GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTV 409
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ L++GLC +G+ EA+ +EM S P++ + L+ C
Sbjct: 410 TYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 202/434 (46%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L +I E E+ ++M E + T I + G + AV +FK +
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C +++T++ + K+ + A + FL + + + N ++ C +
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDA-MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F+EM + P+ ++ IL+ GLC + ++EA + F +++KG DI
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLV----FETMTEKGVEPDIS 339
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C Q + +A ++ E ++RKG AP + + I + ++ AKSL+ E
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGC-APGAHSYNILINGYCKSRRMDEAKSLLAE 398
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P +YS + L GR E + EM + G P+LV Y L K G
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEAL++++ M + P + Y IL++G+ AG VA K+ G + TY
Sbjct: 459 LDEALKLLKS-MKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGD-GTRPDIRTY 516
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++ GL ++G EA + +M + P +YNV+I+G A+ ++EM+
Sbjct: 517 TVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVG 576
Query: 467 QAKLPDISVWSSLV 480
+ ++S + L+
Sbjct: 577 KRFSVNLSTFQMLL 590
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 141/350 (40%), Gaps = 48/350 (13%)
Query: 27 ALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A ++FKE ++ PN + ++ L + ++E + V + M E S +
Sbjct: 287 ATRLFKEMVGRDVMPNTV----TFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYN 342
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
+ Y +NEA +F+ + + C S+N L+ K +++ A L L Y
Sbjct: 343 ALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSL-LAEMYH 401
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + + LM LCQ R AL++F+EM G +P+ +Y IL+ G C L+E
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A LL SM +K +IV Y L+ + GK++ A ++ K+ G +
Sbjct: 462 ALKLLKSM----KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR------- 510
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
P + +Y+ M L EG E + +M
Sbjct: 511 -----------------------------PDIRTYTVMIKGLLKEGLSDEAYDLFRKMED 541
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
GF P+ Y + ++ A+ +I +EMV F + + +LL
Sbjct: 542 DGFLPNSCSYNVMIQGFLQNQDSSTAIRLI-DEMVGKRFSVNLSTFQMLL 590
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 235/533 (44%), Gaps = 54/533 (10%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
RLLT +++Q P AL++ A + ++ + VY +I L + M+
Sbjct: 58 RLLTA------LREQADPEAALQMLNSALAR-EDFAPSRAVYEEIIQKLGTAGAFDLMEG 110
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEM 125
++ +M+ + E V + + +YAR + ++AV L +N L+ F T +N LL +
Sbjct: 111 LVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVL 170
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ S+++ L S Y IQ +LN L+ LC+ + A+ + +EM
Sbjct: 171 AEGSRMK-----LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA 225
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMF------WRIS------------------ 217
PD ++ LM+G + + A + M R++
Sbjct: 226 VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Query: 218 ---QK----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
QK G D V Y T + LC G + A+++++ +L++G + + C
Sbjct: 286 GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+GE ++ AK ++N+ + RG +P +++ + + L ++ R+ E + E+ KG P
Sbjct: 346 SKNGE-LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404
Query: 331 LVMYEAKLAALFKDGMVDEALEV-IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + + AL K G D L + + EEM P YNIL+ LC G A+
Sbjct: 405 VYTFNILINALCKVG--DPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDL 462
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
LK+M GC + TY ++D LC+ R EA V ++M T+N LI GLC
Sbjct: 463 LKEMESN-GCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ +A +E+M+ + P ++S++ C DL LE +++
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHY-CKQGDLKKAADILETMTA 573
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 215/444 (48%), Gaps = 13/444 (2%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
KE + + Y + + L ++ ++ +V+D M + + + T I ++ G
Sbjct: 290 KEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNG 349
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L+EA + + C+ T +FNTL+ + +++LE A + R + + +
Sbjct: 350 ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA-LDLARELTVKGLSPDVYTF 408
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ LC+ L + +F+EM GC PD +Y+IL+ LC+ +L A LL M
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM-- 466
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-KAPKSRRHRID-LCPCN 272
G V Y T++ ALC Q +I++A ++ +++ G+ ++ + ID LC
Sbjct: 467 --ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCK-- 522
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ I+ A LI + + G PS +Y+++ +G + + +L+ M GF +V
Sbjct: 523 -AKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVV 581
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L K G AL+++ +KG PT + YN +++ L N A+ ++
Sbjct: 582 TYGTLINGLCKAGRTQVALKLLRGMRIKG-IRPTPKAYNPVIQSLFRRNNLRDALSLFRE 640
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M+ +VG + TY I+ GLCR G + EA L EM+ + + P ++ +L GL ++
Sbjct: 641 MT-EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699
Query: 452 GKQYEAVMWLEEMISQAKLPDISV 475
G + +E +I +AK + V
Sbjct: 700 GMDDYLISAIELIIEKAKFRESDV 723
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 173/339 (51%), Gaps = 7/339 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V I S N L++ LC+ ++ A+ + EM+ GC+P+ + LM GLC D R++EA
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL +M +KG D+V+Y TL+ C+ G + ++ +++L KG+ A +
Sbjct: 235 ELLEAM----KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 290
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ E A +++N G P + +Y+ + L +GR +L+ M KG
Sbjct: 291 VHGLCRLGQWKE-ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS V Y L+ L K+G+V +A +++ + KG V YN L+KGLCD G A
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV-TYNTLMKGLCDKGKVDEA 408
Query: 387 VMYLKKMSKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ M C+ N T+ +L+ GLC++GR +A ++ +M+ + + TYN+L+
Sbjct: 409 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 468
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G GK EA+ ++++ +P+ +S L+ C
Sbjct: 469 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 507
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 188/442 (42%), Gaps = 57/442 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
NG V+ +M G++ E R + +++ + T I +A +L EAV
Sbjct: 157 NGGVFEAM-GLIREMGRKSVSPDIVS-------------YNTLINGLCKAKKLKEAVG-- 200
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
LL EM EAA C+ V + LMD LC+
Sbjct: 201 -----------------LLLEM------EAA------GCFPNSV-----TCTTLMDGLCK 226
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D A+ + + M +G D Y L+ G CN+ L+ L M KG
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG----KGISA 282
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y L+ LC G+ ++A +L + G+ + C DG A L
Sbjct: 283 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH-AMDL 341
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+N + +G PS +Y+ + L EG +++ K+L M KG +V Y + L
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401
Query: 344 DGMVDEALEVIEEEM-VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G VDEAL++ + P V +N+L+ GLC G AV +KM K+ C N
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC-GN 460
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY +L+ G + G+ EA + +++L + P TY++LI G C + A
Sbjct: 461 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 520
Query: 463 EMISQAKLPDISVWSSLVASVC 484
EM + P + +++L+AS+C
Sbjct: 521 EMRTHGLNPALFDYNTLMASLC 542
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 43/390 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
Q EAVSLF + FN + + N L+ + + A ++ R + +V SL
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTH-VDVLPSFGSL 112
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+ L++ ++ L V + +G + +I++KGLC + + EA L+ M
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREM-- 170
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+K DIV Y TL+ LC K+++A+ +L
Sbjct: 171 --GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL------------------------- 203
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
++E A G P+ + + + L +GR+ E ++L+ M+ KGF +V+Y
Sbjct: 204 -EMEAA----------GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
++ +G +D E+ +E + KG V Y+ L+ GLC G A L M+
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKG-ISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY L+DGLC+DGR A +L M+ + P TYNVL+ GLC G
Sbjct: 312 EH-GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A L MI + K D+ +++L+ +C
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLC 400
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 203/456 (44%), Gaps = 13/456 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ ++ E ++ +M+ C T + + G+++EA+ L + +
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + TL+ L+ LF G + + + + + L+ LC+ +
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELF-DEMLGKGISANVVTYSCLVHGLCRLGQW 300
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A V M G +PD +Y L+ GLC D R A LL M +KG V
Sbjct: 301 KEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV----EKGEEPSNVT 356
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y LL LC +G + DA +IL ++ KG KA + + C+ G+ ++ A L N
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK-VDEALKLFNSM 415
Query: 288 LIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P++ +++ + L EGR+ + K+ +M KG +LV Y L K G
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ EA+E+ ++ + G FVP Y+IL+ G C +A +M G
Sbjct: 476 KIKEAMELWKQVLDLG-FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH-GLNPALFD 533
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE-EM 464
Y L+ LC++G +A + +EM + P + ++N +I G G ++ V L+ +M
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG-DFQFVKELQMKM 592
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ PD +S+L+ + +L+ + LE++
Sbjct: 593 VEMGLRPDALTFSTLINRL-SKLGELDEAKSALERM 627
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 192/483 (39%), Gaps = 82/483 (16%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P +T T L + K A+++ + K+K + + +Y ++I + +
Sbjct: 211 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK--GFDADVVLYGTLISGFCNNGNLDRG 268
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF----NCVNWTQ---- 116
KE+ D+M G ++ + R GQ EA ++ +++ + V +T
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328
Query: 117 ---------------------------SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
++N LL + KE + A + LR K+
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI-LRMMIEKGKKA 387
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCY-PDRESYHILMKGLCNDRRLNEATH 207
+ + N LM LC + D AL +F M D + C P+ ++++L+ GLC + RL +A
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV- 446
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ ++ +KGS ++V Y LL GKI++AM++ +++L G P S + I
Sbjct: 447 ---KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF-VPNSFTYSIL 502
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-- 325
+ + AK L E G P+L Y+ + L EG + + + EM
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562
Query: 326 ---------------------------------GFWPSLVMYEAKLAALFKDGMVDEALE 352
G P + + + L K G +DEA
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+E MV F P VY+ LLKGL G++ + L +M+ + G V + + ++
Sbjct: 623 ALER-MVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK-GTVLDRKIVSTILTC 680
Query: 413 LCR 415
LC
Sbjct: 681 LCH 683
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
++K F V + NI+LKGLC G A+ +++M ++ + +Y L++GLC+
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAK 193
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ EA +L EM +P T L+ GLC G+ EA+ LE M + D+ ++
Sbjct: 194 KLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYG 253
Query: 478 SLVASVCCNTADLNVCRKTLEQL 500
+L++ CN +L+ ++ +++
Sbjct: 254 TLISGF-CNNGNLDRGKELFDEM 275
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 229/492 (46%), Gaps = 38/492 (7%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+L + K L K + + YP + Y+ ++ L ++ + + KE++ Q++
Sbjct: 44 FLDALAKANAGQLAYEKFQQMQRRGYPP---DDFTYSIVLRGLCKAGELDKAKELLGQLR 100
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFNTLLKEMVKESKL 131
+ ++ I +A ++++A+ +FK +S CV +FN+LLK + ++
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERM 160
Query: 132 EAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
A +LF + G E + S + L+D LC+ R D A +++EM + C PD +Y
Sbjct: 161 SEAFVLFEYMAKAGCE--PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM-QILE 249
+ GLC R+ EA M KGS D V + T++ LC +G ++A Q++E
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMV----TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE 274
Query: 250 KILRKGL--KAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL----IRGGI---------- 293
+ R G+ +A K+ I N E +LI+ + G+
Sbjct: 275 HLCRSGMLDEACKTFEEMISR---NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331
Query: 294 -----PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
P+L +Y+ M +L ++ E ++++EM G P +V Y A + L K G +D
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++EE +G F P +L L AG A+ +L+ M K G + TY
Sbjct: 392 RACDLLEEMSKEGVF-PDSFTDASILNALSKAGKVDYALSHLETM-KARGSTPDLVTYNT 449
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC+ GR EA L +M+ P V +Y ++I LC G+ A +EM+ +
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 469 KLPDISVWSSLV 480
LPD ++ SL+
Sbjct: 510 VLPDTVLYHSLL 521
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 205/465 (44%), Gaps = 27/465 (5%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
Y+H+ Y + L+++N E QM+ D ++ +R +AG+L++A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
L L + +++ ++ K S+++ A +F G + + N L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC R A +F+ M GC P+ SY L+ GLC RL+EA L M +K
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV----EK 208
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
D+V Y + + LC ++ +A K++ KG KA + C G E
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268
Query: 280 AKSLINEALIRGGI-----------------PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+I E L R G+ PS ++ + + R+ +G + M
Sbjct: 269 QNQMI-EHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327
Query: 323 RT-KGFW--PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
++ K F+ P+L Y + L K +DEA E++ EM P V Y+ L+ GLC
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV-NEMANYGLSPDVVTYSALVDGLCK 386
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G A L++MSK+ G + T +++ L + G+ A LE M R P +
Sbjct: 387 LGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN L+ GLC G+ EA+ +L +M++ PD+ ++ ++ ++C
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 184/424 (43%), Gaps = 42/424 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S + L ++NR+ E + +M + F+T I + G EA
Sbjct: 217 YTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------- 269
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
N +++ + + L+ A F E+ SR + N L+ +C
Sbjct: 270 -----------NQMIEHLCRSGMLDEACKTF------EEMISRNHPPSAELFNTLIHAVC 312
Query: 163 QCRRSDLALHVFQEMDFQG---CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ +R + +FQ M C P+ E+Y+I++ LC ++L+EA L+ M +
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM----ANY 368
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D+V Y L+ LC GK+ A +LE++ ++G+ P S L + ++
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV-FPDSFTDASILNALSKAGKVDY 427
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S + RG P L +Y+ + L GRI E L +M P + Y +
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIIT 487
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
AL + G A I +EMVK +P +Y+ LL GL G +A+ LK C
Sbjct: 488 ALCRSGQAAGA-HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL----C 542
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ + ++VDGLC+ G+ +A V+E M + TY ++RGL +GK +A
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602
Query: 460 WLEE 463
+++
Sbjct: 603 LVDD 606
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 207/440 (47%), Gaps = 13/440 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++H Y MI L + ++ ++ QMK + C + +F I TY R G +A+
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + +F C + +N LL M+ E++ + ++ + + + + N+L+
Sbjct: 135 KMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK-EPNVYTYNILLKA 193
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ R D A + EM +GC PD SY ++ + ++ EA L S+ ++
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL--SIRFQ----- 246
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++ +Y L+ C + K+++ +L +++ KG+ P + + + ++E A
Sbjct: 247 --PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGID-PNVITYSTVISSLSGIGNVELA 303
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++ + +RG P++ +++++ + GR++E + + M +GF P++V Y +
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHG 363
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L G + EA+ V +M + P V Y L+ G AG+ A KM GC+
Sbjct: 364 LCSHGKMGEAVSV-SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN-GCI 421
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N Y +V+ LCR F +A ++E+M + P T+N I+GLC G+ A+
Sbjct: 422 PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481
Query: 461 LEEMISQAKLPDISVWSSLV 480
+M P+I ++ ++
Sbjct: 482 FCQMEQYGCSPNIKTYNEVL 501
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 207/460 (45%), Gaps = 55/460 (11%)
Query: 31 FKEAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+ + Y N + +G Y ++ L ++NR+ +++ +M CE + T
Sbjct: 165 FQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTT 224
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + ++ G++ EA L V +N L+ +E K++ +L L
Sbjct: 225 VISSMSKLGKVEEARELSIRFQPNVSV-----YNALINGFCREYKVKEVFLL-LGQMVEK 278
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + + ++ L +LAL V+ +M +GC P+ ++ LMKG R+ EA
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338
Query: 206 THLLYSMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
++ W R++++G ++V Y TL+ LC GK+ +A+ + K+ R G
Sbjct: 339 LNI-----WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS------- 386
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
P++++Y A+ G +V ++ ++M T
Sbjct: 387 -----------------------------PNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P++V+Y + + L + M +A +IE+ M P +N +KGLC +G
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK-MSTDNCPPNTVTFNTFIKGLCCSGRVE 476
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ +M +Q GC N +TY ++DGL ++ R EA ++ EM + + TYN +
Sbjct: 477 CAINLFCQM-EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C++GK EA+ L +M+ PD +++L + C
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 181/427 (42%), Gaps = 9/427 (2%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S ++ L +EA+E ++ N VY ++I ++ E+ ++ QM +
Sbjct: 227 SSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVIT 286
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHILFLRS 141
++T I + + G + A++++ + C +F +L+K + LEA +I +
Sbjct: 287 YSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA 346
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E + + N L+ LC + A+ V +M+ GC P+ +Y L+ G
Sbjct: 347 EEGFE--PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L A+ + M G ++V+Y +++ LC A ++EK+
Sbjct: 405 LVGASEIWNKMM----TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTV 460
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G +E A +L + G P++ +Y+ + L E RI E +++ E
Sbjct: 461 TFNTFIKGLCCSGR-VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTE 519
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M KG +LV Y G +EAL+++ + +V G P YN L C G
Sbjct: 520 MEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV-KPDAITYNTLTYAYCMQG 578
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ L K+S V Y L+ G+C EA L++ML T+
Sbjct: 579 KVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATW 638
Query: 442 NVLIRGL 448
N L+RGL
Sbjct: 639 NALVRGL 645
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 200/444 (45%), Gaps = 64/444 (14%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+P+ + ++I Q PL A +IF A + PN++H+ Y +I L + + + +++
Sbjct: 66 SPSRVQKLIASQSDPLLAKEIFDYASRQ-PNFQHSYSSYLILILKLGRAKYFSFIDDLLT 124
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+K + ++F+ I Y A ++A+ +F + +F+C + N +L+ +V
Sbjct: 125 DLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQ 184
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+ + ++V +S N+L+ C + +A +F +M + PD ESY
Sbjct: 185 NYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESY 244
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
ILM+ LC ++N A LL M KG D + Y TLL +LC + K+++A ++L
Sbjct: 245 RILMQALCRKSQVNGAVDLLEDML----NKGYVPDALSYTTLLNSLCRKKKLREAYKLLC 300
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ KG CN P + Y+ + + E
Sbjct: 301 RMKVKG---------------CN---------------------PDIIHYNTVILGFCRE 324
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR ++ KVL++M + G P+LV Y + L GM DEA +EE M+KG F P V
Sbjct: 325 GRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKG-FSPHFAV 383
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR-------------- 415
N L+KG C+ G A ++++ K G + ET+ ++V +C
Sbjct: 384 SNALIKGFCNVGKIEEACGVVEELLKH-GEAPHTETWVMMVSRICEVDDLQRIGEILDKV 442
Query: 416 -------DGRFLEASRVLEEMLIR 432
D R +EA LEE LI+
Sbjct: 443 KKVELKGDTRIVEAGIGLEEYLIK 466
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G+ I A SL N+ R +P + SY + L + ++ +L++M KG+ P
Sbjct: 217 CLNGQ-ISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPD 275
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L +L + + EA +++ VKG P + YN ++ G C G + A L
Sbjct: 276 ALSYTTLLNSLCRKKKLREAYKLLCRMKVKGC-NPDIIHYNTVILGFCREGRAMDACKVL 334
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ M GC+ N +Y LV GLC G F EA LEEM+++ + P N LI+G C+
Sbjct: 335 EDMESN-GCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCN 393
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+GK EA +EE++ + P W +V+ +C
Sbjct: 394 VGKIEEACGVVEELLKHGEAPHTETWVMMVSRIC 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A ++ ++ F P + YNIL++ C G ++A +M K+ + + E+Y
Sbjct: 187 IKPAFDLFKDAHTYDVF-PNTKSYNILIRAFCLNGQISMAYSLFNQMFKR-DVMPDVESY 244
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+ LCR + A +LE+ML + Y P +Y L+ LC K EA L M
Sbjct: 245 RILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKV 304
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ PDI +++++ C ++ C K LE + S
Sbjct: 305 KGCNPDIIHYNTVILGFCREGRAMDAC-KVLEDMES 339
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 298 SYSAMAIDLYNEGR---IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SYS+ I + GR D +L ++++K + + ++ + + + D+AL++
Sbjct: 99 SYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIF 158
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
++K P+ + N +L+ L N L K + N ++Y IL+ C
Sbjct: 159 YT-ILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFC 217
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+G+ A + +M R P VE+Y +L++ LC + AV LE+M+++ +PD
Sbjct: 218 LNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDAL 277
Query: 475 VWSSLVASVC 484
+++L+ S+C
Sbjct: 278 SYTTLLNSLC 287
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 229/492 (46%), Gaps = 38/492 (7%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+L + K L K + + YP + Y+ ++ L ++ + + KE++ Q++
Sbjct: 44 FLDALAKANAGQLAYEKFQQMQRRGYPP---DDFTYSIVLRGLCKAGELDKAKELLGQLR 100
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFNTLLKEMVKESKL 131
+ ++ I +A ++++A+ +FK +S CV +FN+LLK + ++
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERM 160
Query: 132 EAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
A +LF + G E + S + L+D LC+ R D A +++EM + C PD +Y
Sbjct: 161 SEAFVLFEYMAKAGCE--PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM-QILE 249
+ GLC R+ EA M KGS D V + T++ LC +G ++A Q++E
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMV----TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIE 274
Query: 250 KILRKGL--KAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL----IRGGI---------- 293
+ R G+ +A K+ I N E +LI+ + G+
Sbjct: 275 HLCRSGMLDEACKTFEEMISR---NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331
Query: 294 -----PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
P+L +Y+ M +L ++ E ++++EM G P +V Y A + L K G +D
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++EE +G F P +L L AG A+ +L+ M K G + TY
Sbjct: 392 RACDLLEEMSKEGVF-PDSFTDASILNALSKAGKVDYALSHLETM-KARGSTPDLVTYNT 449
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC+ GR EA L +M+ P V +Y ++I LC G+ A +EM+ +
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 469 KLPDISVWSSLV 480
LPD ++ SL+
Sbjct: 510 VLPDTVLYHSLL 521
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 205/465 (44%), Gaps = 27/465 (5%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
Y+H+ Y + L+++N E QM+ D ++ +R +AG+L++A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
L L + +++ ++ K S+++ A +F G + + N L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC R A +F+ M GC P+ SY L+ GLC RL+EA L M +K
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV----EK 208
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
D+V Y + + LC ++ +A K++ KG KA + C G E
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268
Query: 280 AKSLINEALIRGGI-----------------PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+I E L R G+ PS ++ + + R+ +G + M
Sbjct: 269 QNQMI-EHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327
Query: 323 RT-KGFW--PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
++ K F+ P+L Y + L K +DEA E++ EM P V Y+ L+ GLC
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV-NEMANYGLSPDVVTYSALVDGLCK 386
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G A L++MSK+ G + T +++ L + G+ A LE M R P +
Sbjct: 387 LGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN L+ GLC G+ EA+ +L +M++ PD+ ++ ++ ++C
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 187/401 (46%), Gaps = 29/401 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI-----RTYA---------- 91
Y S + L ++NR+ E + +M + F+T I + +A
Sbjct: 216 AYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEH 275
Query: 92 --RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEV 147
R+G L+EA F+ + N + FNTL+ + K +L +LF ++S +
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+++ N+++D LC+ ++ D A + EM G PD +Y L+ GLC +L+ A
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL M S++G D ++L AL GK+ A+ LE + +G + +
Sbjct: 396 LLEEM----SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G I+ A + + + + P + SY+ + L G+ + EM +G
Sbjct: 452 DGLCKAGR-IDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P V+Y + L L ++G+ D ALE+++ + K FV ++ ++L GLC AG + A
Sbjct: 511 LPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFV----MHKMVLDGLCKAGKAEDAC 566
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+++M+ G A+ TY +V GL + G+ +A +++++
Sbjct: 567 EVVERMA-DAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 195/421 (46%), Gaps = 43/421 (10%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+P+ + ++I Q PL A +IF A + PN++H+ + +I L + + + M++++
Sbjct: 13 SPSRVQKLIASQSDPLLAKEIFDLASLQ-PNFKHSYSSFHILILKLGWARQFSLMQDLLM 71
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
++K + S+F+ I Y A ++A+ F ++ QF+ + N LL+ +V
Sbjct: 72 RLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHR 131
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+S + + V +S N+LM C +A +F +M + PD ESY
Sbjct: 132 NYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESY 191
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
ILM+GLC ++N A LL M KG D + Y TLL +LC + K+++A ++L
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDML----NKGYVPDALSYTTLLNSLCRKKKLKEAYKLLC 247
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ KG CN P + Y+ + + E
Sbjct: 248 RMKVKG---------------CN---------------------PDIVHYNTVILGFCRE 271
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR ++ KVL++M + G P+L+ Y ++ L G+ DEA +EE + KG F P V
Sbjct: 272 GRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKG-FSPHFSV 330
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
++ L+ G C+ G A L +M + G + ET+ ++ +C + + + +E
Sbjct: 331 FHALINGFCNVGKLEEACEVLXEMLRH-GEAXHTETWVAIIPRICEVDKLVRMENIFDEX 389
Query: 430 L 430
L
Sbjct: 390 L 390
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASY 299
I+ A + + R G+ +P ++ + I + C +G D+ A +L N+ R P + SY
Sbjct: 134 IRPAFDLFKSAHRYGV-SPDTKSYNILMSAFCFNG-DLSIAYTLFNQMFKRDVAPDVESY 191
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ L + ++ +L++M KG+ P + Y L +L + + EA +++ V
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKV 251
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG P + YN ++ G C G A L+ M GC N +YG LV GLC G +
Sbjct: 252 KGC-NPDIVHYNTVILGFCREGRXLDACKVLEDMPSN-GCSPNLMSYGTLVSGLCDQGLY 309
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +EEML + + P ++ LI G C++GK EA L EM+ + W ++
Sbjct: 310 DEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAI 369
Query: 480 VASVC 484
+ +C
Sbjct: 370 IPRIC 374
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + YNIL+ C G+ ++A +M K+ + E+Y IL+ GLCR + A
Sbjct: 151 PDTKSYNILMSAFCFNGDLSIAYTLFNQMFKR-DVAPDVESYRILMQGLCRKSQVNRAVD 209
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+LE+ML + Y P +Y L+ LC K EA L M + PDI +++++ C
Sbjct: 210 LLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFC 269
Query: 485 CNTADLNVCRKTLEQLSS 502
L+ C K LE + S
Sbjct: 270 REGRXLDAC-KVLEDMPS 286
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ D+AL+ M++ P + N LL+ L N L K + + G + +
Sbjct: 96 NLPDQALKTFHS-MLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTK 154
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y IL+ C +G A + +M R P VE+Y +L++GLC + AV LE+M
Sbjct: 155 SYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDM 214
Query: 465 ISQAKLPDISVWSSLVASVC 484
+++ +PD +++L+ S+C
Sbjct: 215 LNKGYVPDALSYTTLLNSLC 234
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 173/339 (51%), Gaps = 7/339 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V I S N L++ LC+ ++ A+ + EM+ GC+P+ + LM GLC D R++EA
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL +M +KG D+V+Y TL+ C+ G + ++ +++L KG+ A +
Sbjct: 89 ELLEAM----KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 144
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ E A +++N G P + +Y+ + L +GR +L+ M KG
Sbjct: 145 VHGLCRLGQWKE-ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS V Y L+ L K+G+V +A +++ + KG V YN L+KGLCD G A
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV-TYNTLMKGLCDKGKVDEA 262
Query: 387 VMYLKKMSKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ M C+ N T+ +L+ GLC++GR +A ++ +M+ + + TYN+L+
Sbjct: 263 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G GK EA+ ++++ +P+ +S L+ C
Sbjct: 323 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 164/331 (49%), Gaps = 9/331 (2%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+N+++ LC+ A+ + +EM + PD SY+ L+ GLC ++L EA LL M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM- 59
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
G + V TL+ LC G++ +AM++LE + +KG A + CN+
Sbjct: 60 ---EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 116
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G +++ K L +E L +G ++ +YS + L G+ E + VL+ M G P +V
Sbjct: 117 G-NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 175
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + L KDG A++++ + KG P+ YN+LL GLC G A L+ M
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS--YWPCVETYNVLIRGLCSI 451
++ G A+ TY L+ GLC G+ EA ++ M P V T+N+LI GLC
Sbjct: 235 IEK-GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
G+ +AV +M+ + ++ ++ L+
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 324
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 183/442 (41%), Gaps = 57/442 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
NG V+ +M G++ E R + +++ + T I +A +L EAV L
Sbjct: 11 NGGVFEAM-GLIREMGRKSVSPDIVS-------------YNTLINGLCKAKKLKEAVGLL 56
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ C + + TL MD LC+
Sbjct: 57 LEMEAAGCFPNSVTCTTL------------------------------------MDGLCK 80
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D A+ + + M +G D Y L+ G CN+ L+ L M KG
Sbjct: 81 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG----KGISA 136
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y L+ LC G+ ++A +L + G+ + C DG A L
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH-AMDL 195
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+N + +G PS +Y+ + L EG +++ K+L M KG +V Y + L
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255
Query: 344 DGMVDEALEVIEEEM-VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G VDEAL++ + P V +N+L+ GLC G AV +KM K+ C N
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC-GN 314
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY +L+ G + G+ EA + +++L + P TY++LI G C + A
Sbjct: 315 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 374
Query: 463 EMISQAKLPDISVWSSLVASVC 484
EM + P + +++L+AS+C
Sbjct: 375 EMRTHGLNPALFDYNTLMASLC 396
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 194/436 (44%), Gaps = 12/436 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ ++ E ++ +M+ C T + + G+++EA+ L + +
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + TL+ L+ LF G + + + + + L+ LC+ +
Sbjct: 96 KKGFDADVVLYGTLISGFCNNGNLDRGKELF-DEMLGKGISANVVTYSCLVHGLCRLGQW 154
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A V M G +PD +Y L+ GLC D R A LL M +KG V
Sbjct: 155 KEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV----EKGEEPSNVT 210
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y LL LC +G + DA +IL ++ KG KA + + C+ G+ ++ A L N
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK-VDEALKLFNSM 269
Query: 288 LIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P++ +++ + L EGR+ + K+ +M KG +LV Y L K G
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 329
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ EA+E+ ++ + G FVP Y+IL+ G C +A +M G
Sbjct: 330 KIKEAMELWKQVLDLG-FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH-GLNPALFD 387
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE-EM 464
Y L+ LC++G +A + +EM + P + ++N +I G G ++ V L+ +M
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG-DFQFVKELQMKM 446
Query: 465 ISQAKLPDISVWSSLV 480
+ PD +S+L+
Sbjct: 447 VEMGLRPDALTFSTLI 462
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 42/295 (14%)
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+I++KGLC + + EA L+ M +K DIV Y TL+ LC K+++A+ +L
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREM----GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 57
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++E A G P+ + + + L +
Sbjct: 58 --------------------------EMEAA----------GCFPNSVTCTTLMDGLCKD 81
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR+ E ++L+ M+ KGF +V+Y ++ +G +D E+ +E + KG V
Sbjct: 82 GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG-ISANVVT 140
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+ L+ GLC G A L M++ G + TY L+DGLC+DGR A +L M
Sbjct: 141 YSCLVHGLCRLGQWKEANTVLNAMAEH-GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + P TYNVL+ GLC G +A L MI + K D+ +++L+ +C
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC 254
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 192/483 (39%), Gaps = 82/483 (16%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P +T T L + K A+++ + K+K + + +Y ++I + +
Sbjct: 65 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK--GFDADVVLYGTLISGFCNNGNLDRG 122
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF----NCVNWTQ---- 116
KE+ D+M G ++ + R GQ EA ++ +++ + V +T
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 117 ---------------------------SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
++N LL + KE + A + LR K+
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI-LRMMIEKGKKA 241
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCY-PDRESYHILMKGLCNDRRLNEATH 207
+ + N LM LC + D AL +F M D + C P+ ++++L+ GLC + RL +A
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ ++ +KGS ++V Y LL GKI++AM++ +++L G P S + I
Sbjct: 302 I----HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF-VPNSFTYSIL 356
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-- 325
+ + AK L E G P+L Y+ + L EG + + + EM
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416
Query: 326 ---------------------------------GFWPSLVMYEAKLAALFKDGMVDEALE 352
G P + + + L K G +DEA
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+E MV F P VY+ LLKGL G++ + L +M+ + G V + + ++
Sbjct: 477 ALER-MVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK-GTVLDRKIVSTILTC 534
Query: 413 LCR 415
LC
Sbjct: 535 LCH 537
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI+LKGLC G A+ +++M ++ + +Y L++GLC+ + EA +L EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+P T L+ GLC G+ EA+ LE M + D+ ++ +L++ CN +L
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF-CNNGNL 119
Query: 491 NVCRKTLEQL 500
+ ++ +++
Sbjct: 120 DRGKELFDEM 129
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 59 NRITEMKEVIDQ-MKGDSCECKDS--VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT 115
N + E E + Q +K +CK S VF +++ AR +N+A+S+ + +
Sbjct: 108 NTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGV 167
Query: 116 QSFNTLLKEMVK-ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
S+N +L +++ + ++ A +F + V + + N+L+ C ++ L F
Sbjct: 168 LSYNAILDAVIRTKQSVKIAEGIF-KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
EM+ GC P+ +Y+ ++ C R++ EA LL M + KG +++ Y ++
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM----ALKGLNPNLISYNVVING 282
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G++++ +ILE++ ++ + + + CN G + A L E + G P
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG-NFHQALVLHAEMVKNGLSP 341
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ + + G + + LD+MR +G P+ Y + + G + +A +++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E MV+ F PT+ YN L+ G C G A L++M ++ G + + +Y ++ G C
Sbjct: 402 KE-MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFC 459
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+ +A ++ EM+ + P V TY+ LI+GLC + E +EM+S PD
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 475 VWSSLVASVC 484
++SL+ + C
Sbjct: 520 TYTSLINAYC 529
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 200/475 (42%), Gaps = 93/475 (19%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAV----------SLFKNL--SQFNCVNWTQSFNTLLK 123
C+C T + Y A L E V LF+ L S + C + + F+ ++K
Sbjct: 81 CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140
Query: 124 EMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQG 181
+ + + +A I+ L YG+ + S N ++D + + ++S +A +F+EM G
Sbjct: 141 SCARVNLINKALSIVNLAKSYGF--MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESG 198
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
P+ +Y+IL++G C L F + + G ++V Y T++ A C KI
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFF----FGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L + KGL P+L SY+
Sbjct: 255 GEAFKLLRLMALKGLN------------------------------------PNLISYNV 278
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L EG++ E ++L+EM + + P V + + G +AL V+ EMVK
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKN 337
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V Y L+ +C AGN A+ +L +M + G NG TY L+DG + G +
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI-------- 473
A ++++EM+ + P + TYN LI G C +G+ +A L+EMI + +PD+
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 474 ---------------------------SVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ +SSL+ +C VC E LS
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 198/405 (48%), Gaps = 12/405 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
IR + AG L + F + + C+ ++NT++ K K+ EA +L L + G
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG- 268
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + S N++++ LC+ + + +EM + PDR +++ L+ G CN ++A
Sbjct: 269 -LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M + G ++V Y TL+ ++C G + AM+ L+++ +GL P R +
Sbjct: 328 LVLHAEMV----KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLH-PNGRTYT 382
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + ++ A ++ E + G P++ +Y+A+ GR+ + +L EM +
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER 442
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P +V Y ++ ++ +++A + ++ EMV P V Y+ L++GLC
Sbjct: 443 GFIPDVVSYSTIISGFCRNQELEKAFQ-LKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
++M +G + TY L++ C +G +A R+ +EM+ + + P + TYNVLI
Sbjct: 502 VCDLFQEM-LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
G + EA L +++ + +P+ +++L+ + CN +
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN--CNNLEF 603
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 179/416 (43%), Gaps = 23/416 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I R GQ+ E + + +S+ V +FNTL+ A +L
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + L++ +C+ + A+ +M +G +P+ +Y L+ G L
Sbjct: 336 KNG-LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFL 394
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+A Y + + + G I+ Y L+ C G+++DA +L++++ +G P
Sbjct: 395 KQA----YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGF-IPDVV 449
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + +++E A L E + +G P +A+YS++ L + R+ E + EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ G P V Y + + A +G +D+AL + +EM++ F P + YN+L+ G
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALR-LHDEMIQKGFSPDIVTYNVLINGFNKQSR 568
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVLE 427
+ A L K+ + V N TY L+D G C G EA RVLE
Sbjct: 569 TKEAKRLLLKLLYEES-VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLE 627
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ML + Y E YNV+I G +G +A +EM+ P +L S+
Sbjct: 628 SMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 15/428 (3%)
Query: 52 IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+G+L ++ R+ + M +C + + + RAGQ++E S + C
Sbjct: 209 LGMLRQARRL------LHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGC 262
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
++N +++ ++ +L A LF S E + + NLL+ LC+ ++ + AL
Sbjct: 263 ALSAVNYNFIIQGFIRCGRLAEATQLF-ESTMTKESVPDVFTYNLLI-ALCKSKQLEEAL 320
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+FQE + G D +Y LM R +A + Y+M + G D V+Y L
Sbjct: 321 TLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM----QKAGCMPDTVVYNVL 376
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ L QGK+ +A+++LE + RKG+ P R + I + + E A S R
Sbjct: 377 ISCLGKQGKVDEALELLEDMNRKGI-MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P + +Y+ + L R E + DEM+ P L + + L K G +++AL
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E +VK P +YN L+ G C +G + M + C + TY ILV
Sbjct: 496 EQ-SARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI-ECSCFPDSITYTILVL 553
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G R G A +L+EM+ + P + TYNVLIR L G+ +A +EMI++ P
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 613
Query: 472 DISVWSSL 479
D+ +S+L
Sbjct: 614 DMQTYSAL 621
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 193/435 (44%), Gaps = 17/435 (3%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFA--TAIRTYARAGQLNEAVSLFKNLSQ-FNC 111
L E R+ + + D M+ ++C+C V A T I Y +AG + A+ +F+ L Q +C
Sbjct: 99 LCEVRRVEQAMTLFDDMR-ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSC 157
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL-- 169
SF+TL+ + K S+ A +F + G +K+ + N L + C CR L
Sbjct: 158 KPNAVSFDTLVIFLCKMSRATDALAVF-QEMLGAGLKADVNVCNTL--IHCTCRLGMLRQ 214
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M C D +Y IL+ C +++E S G V Y
Sbjct: 215 ARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVA----SFMELARHDGCALSAVNYN 270
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ G++ +A Q+ E + K P + + + C + +E A +L EA
Sbjct: 271 FIIQGFIRCGRLAEATQLFESTMTKE-SVPDVFTYNLLIALCKS-KQLEEALTLFQEAEQ 328
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G + + +YS + GR + +V M+ G P V+Y ++ L K G VDE
Sbjct: 329 GGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDE 388
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
ALE++E+ KG +P R YNI++ L G A + M ++ + TY L
Sbjct: 389 ALELLEDMNRKG-IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKH-SPDVVTYNTL 446
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GL + R EA + +EM P + T+ LI L G+ +A+ ++
Sbjct: 447 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 506
Query: 470 LPDISVWSSLVASVC 484
P+ ++++L++ C
Sbjct: 507 APNSYIYNALISGFC 521
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 149/366 (40%), Gaps = 70/366 (19%)
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLL-------------------------------- 209
C PD ++ M LC RR+ +A L
Sbjct: 85 CQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRA 144
Query: 210 YSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
MF R+ Q+GS + + V + TL+ LC + DA+ + +++L GLKA + + +
Sbjct: 145 LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIH 204
Query: 269 CPCNDG------------------EDIEGAKSLINEALIRGGIPSLASY--------SAM 302
C C G D L+N G + +AS+ A+
Sbjct: 205 CTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCAL 264
Query: 303 AIDLYNE--------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ YN GR+ E ++ + TK P + Y L AL K ++EAL +
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNL-LIALCKSKQLEEALTLF 323
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E +G V V Y+ L+ AG +A A+ M K GC+ + Y +L+ L
Sbjct: 324 QEA-EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQK-AGCMPDTVVYNVLISCLG 381
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ G+ EA +LE+M + P TYN++I L S G+ +A + M + PD+
Sbjct: 382 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 441
Query: 475 VWSSLV 480
+++L+
Sbjct: 442 TYNTLL 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 318 VLDEMRTKGF-WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+LD+MR F P V + A + L + V++A+ + ++ P V YN L+ G
Sbjct: 75 MLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAG 134
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C AG+ A+ +++ ++ C N ++ LV LC+ R +A V +EML
Sbjct: 135 YCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKA 194
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V N LI C +G +A L M + A D + LV + C
Sbjct: 195 DVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 288 LIRGGIPSLA-SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L++ G+P A + +AM ++ GR ++L E+R KG S V + A + G
Sbjct: 9 LLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGD 68
Query: 347 VDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D A+ ++++ M +G F P + + LC+ A+ M + C +
Sbjct: 69 LDAAMGMLDD-MRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVA 127
Query: 406 YGILVDGLCRDG---RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y L+ G C+ G R L+ R L++ S P +++ L+ LC + + +A+ +
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQE--GSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185
Query: 463 EMISQAKLPDISVWSSLVASVC 484
EM+ D++V ++L+ C
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTC 207
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 59 NRITEMKEVIDQ-MKGDSCECKDS--VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT 115
N + E E + Q +K +CK S VF +++ AR +N+A+S+ + +
Sbjct: 108 NTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGV 167
Query: 116 QSFNTLLKEMVK-ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
S+N +L +++ + ++ A +F + V + + N+L+ C ++ L F
Sbjct: 168 LSYNAILDAVIRTKQSVKIAEGIF-KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
EM+ GC P+ +Y+ ++ C R++ EA LL M + KG +++ Y ++
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM----ALKGLNPNLISYNVVING 282
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G++++ +ILE++ ++ + + + CN G + A L E + G P
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG-NFHQALVLHAEMVKNGLSP 341
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ + + G + + LD+MR +G P+ Y + + G + +A +++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E MV+ F PT+ YN L+ G C G A L++M ++ G + + +Y ++ G C
Sbjct: 402 KE-MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFC 459
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+ +A ++ EM+ + P V TY+ LI+GLC + E +EM+S PD
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 475 VWSSLVASVC 484
++SL+ + C
Sbjct: 520 TYTSLINAYC 529
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 201/475 (42%), Gaps = 93/475 (19%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAV----------SLFKNL--SQFNCVNWTQSFNTLLK 123
C+C T + Y A L E V LF+ L S + C + + F+ ++K
Sbjct: 81 CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140
Query: 124 EMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMDFQG 181
+ + + +A I+ L YG+ + S N ++D + + ++S +A +F+EM G
Sbjct: 141 SCARVNLINKALSIVNLAKSYGF--MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESG 198
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
P+ +Y+IL++G C L + F + + G ++V Y T++ A C KI
Sbjct: 199 VSPNVYTYNILIRGFCTAGNL----EMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L + KGL P+L SY+
Sbjct: 255 GEAFKLLRLMALKGLN------------------------------------PNLISYNV 278
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L EG++ E ++L+EM + + P V + + G +AL V+ EMVK
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKN 337
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V Y L+ +C AGN A+ +L +M + G NG TY L+DG + G +
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI-------- 473
A ++++EM+ + P + TYN LI G C +G+ +A L+EMI + +PD+
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 474 ---------------------------SVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ +SSL+ +C VC E LS
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 198/405 (48%), Gaps = 12/405 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
IR + AG L + F + + C+ ++NT++ K K+ EA +L L + G
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG- 268
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + S N++++ LC+ + + +EM + PDR +++ L+ G CN ++A
Sbjct: 269 -LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M + G ++V Y TL+ ++C G + AM+ L+++ +GL P R +
Sbjct: 328 LVLHAEMV----KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLH-PNGRTYT 382
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + ++ A ++ E + G P++ +Y+A+ GR+ + +L EM +
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER 442
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P +V Y ++ ++ +++A + ++ EMV P V Y+ L++GLC
Sbjct: 443 GFIPDVVSYSTIISGFCRNQELEKAFQ-LKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
++M +G + TY L++ C +G +A R+ +EM+ + + P + TYNVLI
Sbjct: 502 VCDLFQEM-LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
G + EA L +++ + +P+ +++L+ + CN +
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN--CNNLEF 603
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 179/416 (43%), Gaps = 23/416 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I R GQ+ E + + +S+ V +FNTL+ A +L
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + L++ +C+ + A+ +M +G +P+ +Y L+ G L
Sbjct: 336 KNG-LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFL 394
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+A Y + + + G I+ Y L+ C G+++DA +L++++ +G P
Sbjct: 395 KQA----YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGF-IPDVV 449
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + +++E A L E + +G P +A+YS++ L + R+ E + EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ G P V Y + + A +G +D+AL + +EM++ F P + YN+L+ G
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALR-LHDEMIQKGFSPDIVTYNVLINGFNKQSR 568
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVLE 427
+ A L K+ + V N TY L+D G C G EA RVLE
Sbjct: 569 TKEAKRLLLKLLYEES-VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLE 627
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ML + Y E YNV+I G +G +A +EM+ P +L S+
Sbjct: 628 SMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 226/519 (43%), Gaps = 44/519 (8%)
Query: 2 SVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
+ R TPT L +++++ + +F A K PN++ + ++ ++ L ++
Sbjct: 47 ATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWAS-KQPNFKPSSSIFKEVLHKLGKAGEF 105
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNT 120
MK+++ +MK + I +YA G NE + + +F V T +N
Sbjct: 106 DAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNF 165
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LL +V +KL+ I + ++ + + N+L+ LC+ + A+ + +EM+
Sbjct: 166 LLNVLVDGNKLKLVEIAH-SNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDF 224
Query: 181 GCYPDRESYHILMKGL-----------------------------------CNDRRLNEA 205
G PD +++ +M+G C + R+ EA
Sbjct: 225 GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEA 284
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ M R +G D + L+ L G ++ A+++++ +LR+G +
Sbjct: 285 LRFIEEMSLR---EGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C GE ++ A ++N+ + R P+ +Y+ + L E ++ E K+ + K
Sbjct: 342 LISGLCKLGE-VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + + L A+E+ +E KG P YN+L+ LC G
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCH-PDEFTYNMLIDSLCFRGKLQE 459
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ LK+M GC N TY L+DG C++ R EA + ++M ++ TYN LI
Sbjct: 460 ALNLLKEMEVS-GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC + EA +++MI + PD ++SL+ C
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFC 557
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 211/434 (48%), Gaps = 17/434 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ LS++ + EV+D M + + + + I + G+++EAV + +
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +C T ++NT++ + KE+++E A L L G + + + N L+ LC R
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLAL-VLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A+ +++EM +GC+PD +Y++L+ LC +L EA +LL M G +++
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM----EVSGCARNVI 477
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKS 282
Y TL+ C +I +A +I +++ +G+ R+ + DG E +E A
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVS-----RNSVTYNTLIDGLCKSERVEEASQ 532
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ ++ G P +Y+++ G I + ++ M + G P +V Y +A L
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC 592
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G V+ A +++ +KG + T YN +++ L S AV ++M ++ +
Sbjct: 593 KAGRVEAATKLLRTIQMKGINL-TPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEA-PD 650
Query: 403 GETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY I+ GLC+ G + EA + EML R Y P ++ +L GL S+ + +
Sbjct: 651 AVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLI 710
Query: 462 EEMISQAKLPDISV 475
+ ++ +AK D V
Sbjct: 711 DMVMEKAKFSDNEV 724
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 204/440 (46%), Gaps = 20/440 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS--- 107
M G + E N M+ V +QM C + + + + G++ EA+ + +S
Sbjct: 237 MQGFIEEGNLDGAMR-VKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE 295
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
F +T FN L+ + K ++ A + LR + + I + N L+ LC+
Sbjct: 296 GFFPDKYT--FNMLVNGLSKTGHVKHALEVMDMMLREGFDPD----IYTYNSLISGLCKL 349
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D A+ V +M + C P+ +Y+ ++ LC + ++ EAT L ++ KG D
Sbjct: 350 GEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA----LVLTGKGILPD 405
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ Y +L+ LC AM++ +++ KG + + + C G+ ++ A +L+
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK-LQEALNLL 464
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E + G ++ +Y+ + RI E +++ D+M +G + V Y + L K
Sbjct: 465 KEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKS 524
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
V+EA +++++ +++G P YN LL C AG+ A ++ M+ GC +
Sbjct: 525 ERVEEASQLMDQMIMEG-LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASD-GCEPDIV 582
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TYG L+ GLC+ GR A+++L + ++ YN +I+ L + EAV EM
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642
Query: 465 ISQAKLPDISVWSSLVASVC 484
I +A+ PD + + +C
Sbjct: 643 IEKAEAPDAVTYKIVFRGLC 662
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L +S R+ E +++DQM + + + + + +AG + +A +
Sbjct: 510 NSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIV 569
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ C ++ TL+ + K ++EAA L LR+ + + N ++ L +
Sbjct: 570 QTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKL-LRTIQMKGINLTPHAYNPVIQALFR 628
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN-DRRLNEATHLLYSMFWR 215
+RS A+ +F+EM + PD +Y I+ +GLC + EA + M R
Sbjct: 629 RKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER 681
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 208/459 (45%), Gaps = 20/459 (4%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
AL++ +E K P+ + P+ +M ++ +D ++ C+ +
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMA-------NAGDLDGAMDHLRSMGCDPNVVTYT 61
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
I +ARA +L EA+ L + + + C ++N L+ + K S + AA + + G
Sbjct: 62 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + N L+D C+ D A + M +G P+ +Y L+ GLC ++ E
Sbjct: 122 G-FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A +L M G D Y L+ LC KI++A Q+L ++ G
Sbjct: 181 AKEVLEEM----KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C G+ +E K+L E + P + +Y+ + L G+I E +LD+M+
Sbjct: 237 SIIHAFCKSGKLLEAQKTL-QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Query: 325 KG-FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P +V Y + L K M+ EA ++++ M K P V Y ++ GLC G
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR-MCKAGCNPDVVTYTTIIDGLCKCGRL 354
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L+ M K+ GC N TY L+ GLC+ + EA RV+EEM P + TYN
Sbjct: 355 EEAEYLLQGM-KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413
Query: 444 LIRGLCSIGKQYEAVMWLEEMI-SQAKL-PDISVWSSLV 480
++ GLC G+ EA ++ M +A+ PD + + ++V
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 185/392 (47%), Gaps = 10/392 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG L+ A+ L + + + ++ M L+ A + LRS +
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA-MDHLRS---MGCDPNVV 58
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ L+ + ++ + A+ + +EM +GC P+ +Y++L+ LC + A ++ M
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G +++ + +L+ C +G + DA ++L ++ KG++ + C
Sbjct: 119 I----EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ +E AK ++ E G P +YSA+ L +I E +++L M G P +V
Sbjct: 175 SQKFLE-AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + + A K G + EA + ++E M K P V YN ++ GLC G A A + L +
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQE-MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + + + TY +++GLC+ +EA ++L+ M P V TY +I GLC G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA L+ M P++ +++L++ +C
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 21/328 (6%)
Query: 164 CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C DL AL + +EM G PD ++ ++ + N L+ A L SM G
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-------GC 53
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIE 278
++V Y L+ A K+++AM++LE++ +G P + + LC + +
Sbjct: 54 DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCP-PNLVTYNVLVDALCKLS----MV 108
Query: 279 GAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
GA + + +I GG P++ +++++ G + + K+L M KG P++V Y A
Sbjct: 109 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 168
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L K EA EV+EE G P Y+ L+ GLC A A L++M+
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS- 226
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
GC + Y ++ C+ G+ LEA + L+EM + P V TYN +I GLC +GK EA
Sbjct: 227 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286
Query: 458 VMWLEEMISQAK-LPDISVWSSLVASVC 484
+ L++M LPD+ +S+++ +C
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLC 314
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 184/427 (43%), Gaps = 52/427 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I + + ++ E +++++M+ C + + + + A +
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + +FN+L+ K ++ A L L ++ + + + L+D LC+
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL-LGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
++ A V +EM G PD +Y L+ GLC ++ EA M R++ G
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQ----MLRRMAGSGCTP 230
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGA 280
D+V+Y +++ A C GK+ +A + L++ +RK K+P + ID LC I A
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQE-MRKQRKSPDVVTYNTVIDGLCKLGK---IAEA 286
Query: 281 KSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
+ ++++ G + P + +YS + L +VE K+LD M G P +V Y +
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 346
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G ++EA E + + M + P V Y L+ GLC A A +++M + GC
Sbjct: 347 GLCKCGRLEEA-EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM-RNAGC 404
Query: 400 VANGETYGILVDGLCRDGRF-------------------------------------LEA 422
N TY +V+GLC GR EA
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464
Query: 423 SRVLEEM 429
++LE+M
Sbjct: 465 EQLLEQM 471
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 9/318 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y+++I L +S + E KEV+++MK ++ I +A ++ EA
Sbjct: 159 RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQ 218
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + ++ C +++++ K KL A L+ + + N ++D L
Sbjct: 219 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT-LQEMRKQRKSPDVVTYNTVIDGL 277
Query: 162 CQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ + A + +M G PD +Y ++ GLC L EA LL R+ + G
Sbjct: 278 CKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL----DRMCKAG 333
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y T++ LC G++++A +L+ + R G AP + + ++ A
Sbjct: 334 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC-APNVVTYTTLISGLCKARKVDEA 392
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT--KGFWPSLVMYEAKL 338
+ ++ E G P+L +Y+ M L GRI E +++ M+ P Y +
Sbjct: 393 ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452
Query: 339 AALFKDGMVDEALEVIEE 356
AL +V EA +++E+
Sbjct: 453 NALMSSDLVQEAEQLLEQ 470
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 55/255 (21%)
Query: 14 LSQIIKKQKSP-----------LTALKIFKEAKEKYPNYRHNGPV------YASMIGILS 56
L ++ K++KSP L L EA+ + +G V Y+++I L
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
+S+ + E ++++D+M C + T I + G+L EA L + + + C
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++ TL+ LC+ R+ D A V +E
Sbjct: 375 TYTTLISG------------------------------------LCKARKVDEAERVMEE 398
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC P+ +Y+ ++ GLC R+ EA L+ M + + D YRT++ AL
Sbjct: 399 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM--KDGRAECSPDAATYRTIVNALM 456
Query: 237 DQGKIQDAMQILEKI 251
+Q+A Q+LE++
Sbjct: 457 SSDLVQEAEQLLEQM 471
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 207/459 (45%), Gaps = 48/459 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL ++++ + +P + Y ++ LS++ R+ + +V+ +M ++
Sbjct: 134 ALGVYRQMNDAHPP---DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVV 190
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+++ ++++A L + + +++ L+ + K +L+ A L L
Sbjct: 191 VQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRG 250
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
I + + ++D LC+ R A+ +F+EM C P +Y+ L+ G C ++EA
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAI 307
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M D++ Y TL+ A C G++ DA ++ ++++ L
Sbjct: 308 RLLGKMV----DDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS--------- 354
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
P + +++++ L EGR+ + ++L+E+ +G
Sbjct: 355 ---------------------------PDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y + K V +A E++ + +G FVP YNIL+ G C AG + A
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG-FVPNTVTYNILVAGCCRAGRTDQA 446
Query: 387 VMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ YL +++ + G C + Y I++D LCRDGR +A + EEM+ R Y P T+ ++
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC + +A LEEMI P ++V++ C
Sbjct: 507 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 545
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 172/378 (45%), Gaps = 34/378 (8%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
NT+L E+ A LF + V + L+ LC+ R D A+ + +M
Sbjct: 49 LNTILAELCDARDTTTAMALFDKMAELGAVNH--TTYYNLIHPLCKARLLDEAMGLLLDM 106
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+G P +++++ GLC RL A + +R D + Y L+ L
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGV-----YRQMNDAHPPDFLTYTKLVHGLSK 161
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRID----------LCPCNDGEDIEGAKSLINEA 287
G+++DA+Q+L++++ S RH D LC G+ ++ A+ L+ E
Sbjct: 162 AGRLRDAVQVLQEMV--------SARHVPDNTTLTVVVQSLCL---GDRVDDARELVEEM 210
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDK-VLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L RG + +YSA+ L R+ E +L E+ +GF P +V Y + L K G
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A+++ EE + PT YN L+ G C AG+ A+ L KM C + TY
Sbjct: 271 LRDAVDIFEEM----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITY 325
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C+ GR +A + ++M+ P V T+ L+ GLC G+ +A+ LEE+
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385
Query: 467 QAKLPDISVWSSLVASVC 484
+ P I ++ +V C
Sbjct: 386 RGCPPTIYTYNCVVDGYC 403
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 11/312 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I L ++ R+ + ++ ++M SC + + I Y RAG ++EA+ L +
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 313
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC ++ TL+ K +L+ A+ LF + ++ + + L+D LC R
Sbjct: 314 VDDNCAPDVITYTTLMSAFCKMGRLDDAYELF-QQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL + +E+ +GC P +Y+ ++ G C ++ +A L+ R G + V
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR----GFVPNTV 428
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS-RRHRIDL-CPCNDGEDIEGAKSLI 284
Y L+ C G+ A+Q L+++ +G P S + I L C DG + A
Sbjct: 429 TYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR-TDDAVQFY 487
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E + RG +P+ A+++ + L + + ++L+EM G P +A ++A +
Sbjct: 488 EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRA 547
Query: 345 GMVDEALEVIEE 356
GM+ +A E+ E
Sbjct: 548 GMIQKADELASE 559
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 142/335 (42%), Gaps = 40/335 (11%)
Query: 183 YP-DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
YP D ++ ++++GL +L HL + I +G D V T+L LCD
Sbjct: 6 YPSDSSTFAVVLRGLHASAKLR---HLGPLLLDEIRDRGLSPDPVELNTILAELCDARDT 62
Query: 242 QDAMQILEKILRKGLKAPKSRRHRID-LCPCNDGEDIEG-----------AKSLINEALI 289
AM + +K+ G + + I LC ++ G +L++ +I
Sbjct: 63 TTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVI 122
Query: 290 RG-----------GI---------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G G+ P +Y+ + L GR+ + +VL EM + P
Sbjct: 123 GGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ +L VD+A E++EE + +G + Y+ L+ GLC AV
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI-TYSALVDGLCKCERLDEAVAL 241
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L + G + TY ++DGLC+ GR +A + EEM S P TYN LI G C
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G EA+ L +M+ PD+ +++L+++ C
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC 333
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 212/443 (47%), Gaps = 12/443 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + I + AG+ EAV L
Sbjct: 271 NSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLL 330
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C Q++ L+ + ++ K E A ++ + V + + + + L++ L
Sbjct: 331 GKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV-TYSALINQLYV 389
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + AL +F+ M P+ E+Y++++KG C+ + +AT ++F ++ + G
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT----AIFDQMLKAGPSP 445
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+++ Y ++ QG + +AM++LE + GLK + + + G +E A SL
Sbjct: 446 NVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL-ISGFSRGGKLEHAFSL 504
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
NE + G P++ +Y+A+ ++ + + +M G PS Y ++ K
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E +MVK +P V Y + GLC G +++A +M K+ N
Sbjct: 565 TNRISEA-ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR-DYFPNL 622
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+DGLC++G+ +A R+L++ P V+TY L+RGLC G+ YEA +E
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M + P ++ +L+ C N
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKN 701
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 218/512 (42%), Gaps = 66/512 (12%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++ ++ + + L+ F + ++H+ + SM+ NR+ + +
Sbjct: 76 LKPHHVVNLLDTHNNTESVLRFFHWVSRTH-FFKHDMSCFVSML------NRLVRDRLFV 128
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVK 127
D+V I++ G++ + + ++ +T SF+TLL ++ K
Sbjct: 129 P---------ADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGK 179
Query: 128 ---ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +I L S ++ + + N ++ +LC + A + + G P
Sbjct: 180 FDMDGLGRDVYIEMLNS----GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACP 235
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y L+ G C + L+ L + MF R+ + G + V Y L+ LC +G++++A
Sbjct: 236 DTFTYTSLIIGHCKNGNLD----LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
M +LE+++ KG++ P + I + C+ G E K L+ + RG P++ +Y+A+
Sbjct: 292 MDMLEEMIDKGIE-PTVHAYTIPIVSLCDAGRSCEAVK-LLGKMKKRGCGPNVQTYTALI 349
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L +G+ V +M G P+ V Y A + L+ +G + AL + E M+
Sbjct: 350 SGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF-EWMLSHDS 408
Query: 364 VPTVRVYNILLKGLCDAG--NSAVAV--------------------------------MY 389
+P YN+++KG C G A A+ M
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L +M K G + TY L+ G R G+ A + EM+ P V TYN +I G
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
++ K +A+ +M+ +P ++ +++
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMIS 560
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
CN G+ ++ A+ ++ G P +Y+++ I G + ++ D M G P+
Sbjct: 213 CNKGK-VQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPN 271
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
V Y A + L +G ++EA++++EE + KG PTV Y I + LCDAG S AV L
Sbjct: 272 SVTYSALINGLCSEGRLEEAMDMLEEMIDKG-IEPTVHAYTIPIVSLCDAGRSCEAVKLL 330
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM K+ GC N +TY L+ GL RDG+F A V +ML P TY+ LI L
Sbjct: 331 GKMKKR-GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYV 389
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ A+ E M+S LP+ ++ ++ C
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFC 423
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+L S+S + I L G V EM G P+L + A + L G V EA E+I
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEA-ELI 224
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ P Y L+ G C GN +A +M K GC N TY L++GLC
Sbjct: 225 MGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD-GCDPNSVTYSALINGLC 283
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+GR EA +LEEM+ + P V Y + I LC G+ EAV L +M + P++
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343
Query: 475 VWSSLVASV 483
+++L++ +
Sbjct: 344 TYTALISGL 352
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 6 PRLLTPT-YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P ++T T ++ + K ++ L A KIF E K++ +Y N Y+S+I L + + +
Sbjct: 585 PNVITYTSFIDGLCKNGRTSL-AFKIFHEMKKR--DYFPNLCTYSSLIDGLCQEGQAEDA 641
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++D D CE + T +R G+ EA L +++ + + + LL
Sbjct: 642 ERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K ++E+A +F S + + L+ LC+ A +FQ M +
Sbjct: 698 QCKNLEVESALKIF-DSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNS 756
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSM 212
D + +L+ GL + + + LL+ M
Sbjct: 757 DEVVWTVLLDGLLKEGETDLSLELLHVM 784
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 211/448 (47%), Gaps = 9/448 (2%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
K P R N Y M+ L + R E+ EV ++M ++ + + I R+G +
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDV 315
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ A ++ + + V +N+L+K + +++ A + G+ +++ N+
Sbjct: 316 DGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW--DSAGFAGLRNLRTYNI 373
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++ L D A+ ++ ++ C PD ++ L+ GLC + N+A +++F
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKA----FTIFEE 429
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
G D+ Y +++ LC+ G++ DA+++ EK+ + G K P S + +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK-PNSHIYNALISGFCQVY 488
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A + ++ G P++ +Y+ + L + E V EM GF P + Y
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + LF D +D+AL + ++ + KG V V ++NIL+ GLC AG A+ M +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVFSDMKE 607
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ C N TY L+DGL G +A+ + + P + +YN I+GLCS + +
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
E + L+E++S+ +P + W+ LV +V
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAV 695
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 184/411 (44%), Gaps = 14/411 (3%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+S + ++RA + A+ F+ L S C +S N LL V+ + A F
Sbjct: 83 ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFF 142
Query: 139 L---RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+G + +Q+ N+++ LC D A+ +F + + PD +Y LM G
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCG 202
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L RL+ A LL M + G D+V Y LL G+ + M++ +K+++
Sbjct: 203 LAKQDRLDHALDLLDEM----PRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 256 LKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIV 313
P + + L C G E + + E ++ + P + +Y + L G +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGE--VWERMVANNLQPDVITYGILIHGLCRSGDVD 316
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+V E+ G MY + + + G V EA + + G + +R YNI+
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG--LRNLRTYNIM 374
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KGL D+G A+ + K V C+ + T+G L+ GLC++G +A + EE +
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +Y+ +I GLC++G+ +AV E+M P+ ++++L++ C
Sbjct: 435 KQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 180/405 (44%), Gaps = 11/405 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++T + A+ +L+ A+ L + + +N LL K + E ++ +
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKL 254
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + N+++D LC+ R V++ M PD +Y IL+ GLC
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++ A + + I + G D +Y +L+ C G++Q+A + + GL+
Sbjct: 315 VDGAARV----YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR--NL 368
Query: 262 RRHRIDLCPCNDGEDIEGAKSLIN--EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
R + I + D ++ A L + E + IP ++ + L G + +
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDV-ACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+E R G + Y + + L G + +A++V E+ M K P +YN L+ G C
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEK-MDKDGCKPNSHIYNALISGFCQ 486
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
++ AV KM+ GC TY L+DGLC+ ++ EAS V EM+ + P +
Sbjct: 487 VYRTSDAVRIYSKMADN-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY LIRGL S K +A+ ++++ + D+ + + L+ +C
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A IF+EA+ + + Y+SMI L R+ + +V ++M D C+ ++
Sbjct: 423 AFTIFEEARVS--GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + + ++AV ++ ++ C ++NTL+
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI------------------------ 516
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
D LC+ + A V +EM G PD +Y L++GL +D+++++A
Sbjct: 517 ------------DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA- 563
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S++ +I KG D++++ L+ LC GK+ +A+ + + K P +
Sbjct: 564 ---LSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + I+ A +L G P + SY+ L + RI EG ++LDE+ ++G
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680
Query: 327 FWPSLVMYEAKLAALFKDGMV 347
P+++ + + A+ K G +
Sbjct: 681 IIPTVITWNILVRAVIKYGPI 701
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 235/509 (46%), Gaps = 40/509 (7%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L+TP L ++++ T L+IF+ + Y H VY I L + + ++
Sbjct: 76 LITPVQLCKLLELPLDVPTLLEIFERVGGQ-KGYCHTFDVYYVFINKLGAIGKFKLIDKL 134
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMV 126
+ QMK + ++S+F ++ Y +AGQ +A+ L ++ + + C +S++ +L+ +V
Sbjct: 135 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ + A +F V + + ++M LC D A + ++M GC P+
Sbjct: 195 TGNCPQVATNVF-YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNS 253
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y L+ L +++EA LL MF G D+ + ++ LC KI DA +
Sbjct: 254 IVYQTLIHALSQKNQVSEALKLLEEMFVM----GCMPDVQTFNDVIHGLCKVNKIHDATK 309
Query: 247 ILEKILRKGL------------------KAPKSRRHRIDL-CPCN-------DGEDIEG- 279
+++++L +G K ++R+ I + CP N +G + G
Sbjct: 310 LVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQ 369
Query: 280 ---AKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A+S +NE +I G P + +Y+ + L EG + +++EM +G P+++ Y
Sbjct: 370 LKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA 429
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K G+++EA V+ E +G + +V +YN L+ LC VA+ L +M
Sbjct: 430 ILVNGLCKAGLLEEAGLVLHEMSARGLTINSV-IYNCLICALCRKEKVHVALNLLSEMCT 488
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC + TY L+ GLC+ R EA R+ ML+ TYN LI L G
Sbjct: 489 K-GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ + +M+ + D ++ L+ + C
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFC 576
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 199/436 (45%), Gaps = 11/436 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I L + N+I + +++D+M + + + R G+LNEA + L
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LI 347
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C N NTL+ V +L+ A + + + I + N+LM LC+
Sbjct: 348 KIPCPN-NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM +GC P+ +Y IL+ GLC L EA +L+ M S +G + VI
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEM----SARGLTINSVI 462
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ ALC + K+ A+ +L ++ KG K + + C + I+ A L +
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV-DRIDEAFRLFHNM 521
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L+ G + + +Y+ + L G + ++++M +G + Y + A K G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++ LE+ E+ ++ G T+ NI++ GLC G A +L+ + G V + TY
Sbjct: 582 EKGLELYEQMIMDGLGADTISC-NIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYN 639
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++GLC+ GR EA + + + + P TYN I C G +A ++ I
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIEN 699
Query: 468 AKLPDISVWSSLVASV 483
+P W+ LV ++
Sbjct: 700 GFVPSNLTWNVLVYTL 715
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 208/446 (46%), Gaps = 21/446 (4%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY ++I LS+ N+++E +++++M C F I + ++++A L
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 104 KN--LSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L F N T F LL + + KL EA IL C + LN L++
Sbjct: 312 DRMLLRGFYPDNMTYGF--LLHGLCRIGKLNEARKILIKIPCPNNAI------LNTLING 363
Query: 161 LCQCRRSDLALHVFQE--MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ A E ++F G PD +Y+ILM GLC + L+ A L+ M S+
Sbjct: 364 YVMSGQLKEAQSFLNETMINF-GFQPDIFTYNILMHGLCKEGSLSFARDLVNEM----SR 418
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G +++ Y L+ LC G +++A +L ++ +GL S + +C E +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI-NSVIYNCLICALCRKEKVH 477
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L++E +G P L +Y+++ L RI E ++ M G + V Y +
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL + G +AL ++ + + +G + + YN L+K C GN + ++M G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVGNIEKGLELYEQMIMD-G 595
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
A+ + I+++GLC+ G+ A L + + R + P + TYN ++ GLC +G+ EA+
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+ + + PD +++ ++ C
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQC 681
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 211/448 (47%), Gaps = 9/448 (2%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
K P R N Y M+ L + R E+ EV ++M ++ + + I R+G +
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDV 315
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ A ++ + + V +N+L+K + +++ A + G+ +++ N+
Sbjct: 316 DGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW--DSAGFAGLRNLRTYNI 373
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++ L D A+ ++ ++ C PD ++ L+ GLC + N+A +++F
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKA----FTIFEE 429
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
G D+ Y +++ LC+ G++ DA+++ EK+ + G K P S + +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK-PNSHIYNALISGFCQVY 488
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A + ++ G P++ +Y+ + L + E V EM GF P + Y
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + LF D +D+AL + ++ + KG V V ++NIL+ GLC AG A+ M +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVFSDMKE 607
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ C N TY L+DGL G +A+ + + P + +YN I+GLCS + +
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
E + L+E++S+ +P + W+ LV +V
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAV 695
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 184/411 (44%), Gaps = 14/411 (3%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+S + ++RA + A+ F+ L S C +S N LL V+ + A F
Sbjct: 83 ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFF 142
Query: 139 L---RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+G + +Q+ N+++ LC D A+ +F + + PDR +Y LM G
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCG 202
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L RL+ A LL M + D+V Y LL G+ + M++ +K+++
Sbjct: 203 LAKQDRLDHALDLLDEM----PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 256 LKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIV 313
P + + L C G E + + E ++ + P + +Y + L G +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGE--VWERMVANNLQPDVITYGILIHGLCRSGDVD 316
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+V E+ G MY + + + G V EA + + G + +R YNI+
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG--LRNLRTYNIM 374
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KGL D+G A+ + K V C+ + T+G L+ GLC++G +A + EE +
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +Y+ +I GLC++G+ +AV E+M P+ ++++L++ C
Sbjct: 435 KQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 187/440 (42%), Gaps = 46/440 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +R+ G L+ AV+LF +L + +++TL+ + K+ +L+ A + L
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA-LDLLDE 218
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDR 200
V+ + N L+ + + + V+ ++ G P+ +Y++++ GLC
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 201 RLNEATHLLYSMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R E + W R+ D++ Y L+ LC G + A ++ +I++ GL
Sbjct: 279 RFKEVGEV-----WERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + + C G E K + G+ +L +Y+ M L++ G + E ++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGF--AGLRNLRTYNIMIKGLFDSGMVDEAIELW 391
Query: 320 DEM-RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-------------- 364
D + + P V + + L ++G ++A + EE V G +
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451
Query: 365 --------------------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
P +YN L+ G C ++ AV KM+ GC
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN-GCSPTVI 510
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+DGLC+ ++ EAS V EM+ + P + TY LIRGL S K +A+ +++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + D+ + + L+ +C
Sbjct: 571 LYKGLKVDVMMHNILIHGLC 590
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A IF+EA+ + + Y+SMI L R+ + +V ++M D C+ ++
Sbjct: 423 AFTIFEEARVS--GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + + ++AV ++ ++ C ++NTL+
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI------------------------ 516
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
D LC+ + A V +EM G PD +Y L++GL +D+++++A
Sbjct: 517 ------------DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA- 563
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S++ +I KG D++++ L+ LC GK+ +A+ + + K P +
Sbjct: 564 ---LSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + I+ A +L G P + SY+ L + RI EG ++LDE+ ++G
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680
Query: 327 FWPSLVMYEAKLAALFKDGMV 347
P+++ + + A+ K G +
Sbjct: 681 IIPTVITWNILVRAVIKYGPI 701
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 235/509 (46%), Gaps = 40/509 (7%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L+TP L ++++ T L+IF+ + Y H VY I L + + ++
Sbjct: 76 LITPVQLCKLLELPLDVPTLLEIFERVGGQ-KGYCHTFDVYYVFINKLGAIGKFKLIDKL 134
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMV 126
+ QMK + ++S+F ++ Y +AGQ +A+ L ++ + + C +S++ +L+ +V
Sbjct: 135 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 194
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ + A +F V + + ++M LC D A + ++M GC P+
Sbjct: 195 TGNCPQVATNVF-YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNS 253
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y L+ L +++EA LL MF G D+ + ++ LC KI DA +
Sbjct: 254 IVYQTLIHALSQKNQVSEALKLLEEMFVM----GCMPDVQTFNDVIHGLCKVNKIHDATK 309
Query: 247 ILEKILRKGL------------------KAPKSRRHRIDL-CPCN-------DGEDIEG- 279
+++++L +G K ++R+ I + CP N +G + G
Sbjct: 310 LVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQ 369
Query: 280 ---AKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A+S +NE +I G P + +Y+ + L EG + +++EM +G P+++ Y
Sbjct: 370 LKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA 429
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K G+++EA V+ E +G + +V +YN L+ LC VA+ L +M
Sbjct: 430 ILVNGLCKAGLLEEAGLVLHEMSARGLTINSV-IYNCLICALCRKEKVHVALNLLSEMCT 488
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC + TY L+ GLC+ R EA R+ ML+ TYN LI L G
Sbjct: 489 K-GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ + +M+ + D ++ L+ + C
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFC 576
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 198/436 (45%), Gaps = 11/436 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I L + N+I + +++D+M + + + R G+LNEA K L
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR---KILI 347
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C N NTL+ V +L+ A + + + I + N+LM LC+
Sbjct: 348 KIPCPN-NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM +GC P+ +Y IL+ GLC L EA +L+ M S +G + VI
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEM----SARGLTINSVI 462
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ ALC + K+ A+ +L ++ KG K + + C + I+ A L +
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV-DRIDEAFRLFHNM 521
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L+ G + + +Y+ + L G + ++++M +G + Y + A K G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++ LE+ E+ ++ G T+ NI++ GLC G A +L+ + G V + TY
Sbjct: 582 EKGLELYEQMIMDGLGADTISC-NIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYN 639
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++GLC+ GR EA + + + + P TYN I C G +A + I
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIEN 699
Query: 468 AKLPDISVWSSLVASV 483
+P W+ LV ++
Sbjct: 700 GFVPSNLTWNVLVYTL 715
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 208/446 (46%), Gaps = 21/446 (4%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY ++I LS+ N+++E +++++M C F I + ++++A L
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 104 KN--LSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L F N T F LL + + KL EA IL C + LN L++
Sbjct: 312 DRMLLRGFYPDNMTYGF--LLHGLCRIGKLNEARKILIKIPCPNNAI------LNTLING 363
Query: 161 LCQCRRSDLALHVFQE--MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ A E ++F G PD +Y+ILM GLC + L+ A L+ M S+
Sbjct: 364 YVMSGQLKEAQSFLNETMINF-GFQPDIFTYNILMHGLCKEGSLSFARDLVNEM----SR 418
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G +++ Y L+ LC G +++A +L ++ +GL S + +C E +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI-NSVIYNCLICALCRKEKVH 477
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L++E +G P L +Y+++ L RI E ++ M G + V Y +
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL + G +AL ++ + + +G + + YN L+K C GN + ++M G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVGNIEKGLELYEQMIMD-G 595
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
A+ + I+++GLC+ G+ A L + + R + P + TYN ++ GLC +G+ EA+
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+ + + PD +++ ++ C
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQC 681
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 150/335 (44%), Gaps = 7/335 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + ++ ++++++M CE +A + +AG L EA + +S
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS 452
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +N L+ + ++ K+ A L C K + + N L+ LC+ R
Sbjct: 453 ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRI 511
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A +F M G + +Y+ L+ L +A L+ M +R G D +
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR----GCTLDKIT 567
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ A C G I+ +++ E+++ GL A + + C G+ ++ A + +A
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK-VDNAFEFLRDA 626
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ RG +P + +Y+++ L GRI E + D ++ +G P Y ++ K+GMV
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMV 686
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
++A + G FVP+ +N+L+ L N
Sbjct: 687 NDACSFFYRGIENG-FVPSNLTWNVLVYTLLKQSN 720
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 43/410 (10%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+C VF +RTY +A +L E F+ L + N+LL +VK
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVK------- 74
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
GW DLA ++QE+ G + + +I++
Sbjct: 75 --------VGW---------------------VDLAWEIYQEVVRSGVQVNVYTLNIMIN 105
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
LC ++++ L M +KG D+V Y TL+ A C QG +++A ++++ + K
Sbjct: 106 ALCKNQKIENTKSFLSDM----EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 161
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
GLK + I C G+ + AK +++E L G P A+Y+ + ++ +++
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD 220
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+++ DEM ++G P LV + A + L K+G +D+AL+ + M P +Y IL+
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD-MKNAGLAPDNVIYTILI 279
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C G + A+ +M +Q GCV + TY +++GLC++ EA + EM R
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQ-GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+P T+ LI G G +AV E MI + PD+ +++L+ C
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 388
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 18/467 (3%)
Query: 15 SQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGD 74
+Q I+ KS L+ + E K +P+ Y ++I + E E++D M G
Sbjct: 110 NQKIENTKSFLSDM----EEKGVFPDV----VTYNTLINAYCRQGLLEEAFELMDSMSGK 161
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+ + I + G+ A + + + T ++N LL E + + A
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F V + S + L+ +L + D AL F++M G PD Y IL+
Sbjct: 222 ERIF-DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C + ++EA + M ++G D+V Y T+L LC + + +A ++ ++ +
Sbjct: 281 GFCRNGVMSEALKVRDEML----EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ P + + ++ A +L + R P + +Y+ + ID + +G +E
Sbjct: 337 GV-FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL-IDGFCKGSEME 394
Query: 315 G-DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+++ ++M ++ +P+ + Y + G V EA + +EMV+ F T+ N +
Sbjct: 395 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR-LWDEMVEKGFEATIITCNTI 453
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KG C AGN+ A +L M + G V +G TY L++G ++ A ++ +M
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYNV++ G G+ EA + + +MI + PD S ++SL+
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 184/425 (43%), Gaps = 8/425 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ + K V+D+M + + + R + +A +F +
Sbjct: 170 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 229
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V SF+ L+ + K L+ A + + R + +L+ C+
Sbjct: 230 SQGVVPDLVSFSALIGLLSKNGCLDQA-LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V EM QGC D +Y+ ++ GLC ++ L+EA L F ++++G D
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL----FTEMTERGVFPDFYT 344
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ G + A+ + E ++++ LK P + + G ++E L N+
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLK-PDVVTYNTLIDGFCKGSEMEKVNELWNDM 403
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P+ SY + N G + E ++ DEM KGF +++ + + G
Sbjct: 404 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A E + ++KG VP YN L+ G N A + KM G + + TY
Sbjct: 464 VKADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENS-GLLPDVITYN 521
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++++G R GR EA ++ +M+ R P TY LI G + EA +EM+ +
Sbjct: 522 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Query: 468 AKLPD 472
+PD
Sbjct: 582 GFVPD 586
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 6/220 (2%)
Query: 284 INEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
I + ++R G+ ++ + + M L +I L +M KG +P +V Y + A
Sbjct: 84 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 143
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G+++EA E+++ KG P V YN ++ GLC G A L +M K +G +
Sbjct: 144 RQGLLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPD 201
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY IL+ CR+ ++A R+ +EM + P + +++ LI L G +A+ +
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261
Query: 463 EMISQAKLPDISVWSSLVASVCCN---TADLNVCRKTLEQ 499
+M + PD +++ L+ C N + L V + LEQ
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 301
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ EG + +++KG S+ + L L K G VD A E+ +E + G V V
Sbjct: 42 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTL 100
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI++ LC +L M ++ G + TY L++ CR G EA +++ M
Sbjct: 101 NIMINALCKNQKIENTKSFLSDMEEK-GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 159
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ PCV TYN +I GLC GK A L+EM+ PD + ++ L+ CC ++
Sbjct: 160 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE-CCRNDNM 218
Query: 491 NVCRKTLEQLSS 502
+ +++ S
Sbjct: 219 MDAERIFDEMPS 230
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 207/459 (45%), Gaps = 56/459 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
A K F E K NG V Y SM+G+L ++NR+ E E+ +QM+ +
Sbjct: 150 AWKFFHEMKA-------NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAY 202
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I Y AG+ +EA SL + C+ ++N +L + K+ K + A +F
Sbjct: 203 AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE- 261
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + N+++ +LC+ + A V M G +P+ + +I++ LC ++
Sbjct: 262 -MKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+EA + M +++ D + +L+ L QG++ DA +I E++L
Sbjct: 321 LDEACSIFEGMDYKVCSP----DGATFCSLIDGLGKQGRVDDAYRIYERML--------- 367
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
D + I P++ Y+++ + + R +G K+ E
Sbjct: 368 -----------DADQI----------------PNVVVYTSLIRNFFKCDRKEDGHKMYKE 400
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P L++ + +FK G ++ + EE +G F+P R Y+IL+ L AG
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG-FLPDTRSYSILIHSLVKAG 459
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ M Q GCV + Y ++DG C+ G+ +A ++LEEM + P V TY
Sbjct: 460 FARETYELYYAMKDQ-GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++ GL I + EA M EE S + ++SSL+
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLI 557
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 183/442 (41%), Gaps = 47/442 (10%)
Query: 45 GPVYASMIGILS---ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
GP + + +++ +S ++ E +++ M+ S + T I + G+ + ++
Sbjct: 23 GPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLA 82
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + + TL++ +E +++AA + L + I N+ +D
Sbjct: 83 LFNQMQELGYEVNVHLLTTLIRVFSREGRVDAA-LSLLDEMKSNTFDADIVLYNVCIDCF 141
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ + D+A F EM G PD +Y +M LC RL+EA + F ++ Q
Sbjct: 142 GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEI----FEQMEQNRQ 197
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
Y T++ GK +A +LE R R
Sbjct: 198 VPCAYAYNTMIMGYGSAGKFDEAYSLLE-------------RQR---------------- 228
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+G IPS+ +Y+ + L +G+ + ++ +EM+ P+L Y + L
Sbjct: 229 -------AKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGML 280
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G V+ A +V + M + P VR NI++ LC A A + M +V C
Sbjct: 281 CKAGNVEAAFKV-RDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV-CSP 338
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+G T+ L+DGL + GR +A R+ E ML P V Y LIR ++ +
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMY 398
Query: 462 EEMISQAKLPDISVWSSLVASV 483
+EM+ PD+ + ++ + V
Sbjct: 399 KEMMRSGCSPDLMLLNTYMDCV 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 143/358 (39%), Gaps = 41/358 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + +R + ++ +M C + T + +AG+ + +LF
Sbjct: 374 NVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALF 433
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + + T+S++ L+ +VK E + + G + +R + N ++D C
Sbjct: 434 EEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR--AYNTVIDGFC 491
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A + +EM G +P +Y ++ GL RL+EA Y +F G
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEA----YMLFEEAKSNGIE 547
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-------------------------- 256
+ VIY +L+ G++ +A ++E++++KGL
Sbjct: 548 LNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVC 607
Query: 257 ----KAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
K K ++I C +G A E +G P+ +Y+AM L
Sbjct: 608 FQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAK 667
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + + + + R G P Y A + L +A ++ EE +KG + T
Sbjct: 668 SGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHT 725
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L EM GF P+ +A+ K + EA ++++ M F P Y L+
Sbjct: 11 EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQM-MRHFKFRPAFSAYTTLIG 69
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L + G S + +M +++G N L+ R+GR A +L+EM ++
Sbjct: 70 ALSEVGESDRMLALFNQM-QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRK 495
+ YNV I +GK A + EM + +PD ++S++ V C L+ +
Sbjct: 129 ADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMG-VLCKANRLDEAVE 187
Query: 496 TLEQL 500
EQ+
Sbjct: 188 IFEQM 192
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 177/387 (45%), Gaps = 54/387 (13%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+G ++ I S N+L+ C C + AL F ++ G +P +++ L+ GLC + R+
Sbjct: 7 HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA L + M ++V + TL+ LC +G++ +A+ +L++++ GL+ +
Sbjct: 67 SEALDLFHQM--------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 118
Query: 263 RHRIDLCPCNDGEDIEG-----------------------------------AKSLINEA 287
I C G+ + A++L E
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+G P + +YS M + G+ E ++L EM + P +V + + AL K+G +
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV---------- 397
+ A ++++E M+ P V N LL GLCD+G A+ K M K +
Sbjct: 239 NSAQDLLQE-MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC + EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ M S++ P+I +++L+ C
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYC 384
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 201/431 (46%), Gaps = 26/431 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
+ +++ L +R++E ++ QM CK +V F T + R G++ EAV+L
Sbjct: 52 TFNTLLHGLCVEDRVSEALDLFHQM------CKPNVVTFTTLMNGLCREGRVVEAVALLD 105
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ T++ M K +A L + +K + + ++D L +
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKD 165
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGE 223
R A ++F EM +G +PD +Y ++ G C+ + +EA LL M R IS
Sbjct: 166 GRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS-----P 220
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG---EDIEGA 280
D+V + L+ AL +G + A +L++++ G+ + + C+ G + +E
Sbjct: 221 DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMF 280
Query: 281 KSL------INEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
K++ I+ G+ P + +Y+ + L NEG+ +E +++ +EM +G P V
Sbjct: 281 KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVT 340
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + + L K +DEA ++ + M +F P + +N L+ G C AG + +M
Sbjct: 341 YSSMINGLCKQSRLDEATQMFDS-MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G VAN TY L+ G + G + + +EM+ +P T ++ GL S +
Sbjct: 400 GRR-GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 454 QYEAVMWLEEM 464
A+ LEE+
Sbjct: 459 LKRALAMLEEL 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +++ + L E R+ E + +M P++V + + L ++G V EA+ +
Sbjct: 48 PTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVAL 103
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ MV+ P Y ++ G+C G++ A+ L+KM + + Y ++DGL
Sbjct: 104 LDR-MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+DGR +A + EM + +P + TY+ +I G CS GK EA L+EM+ + PD+
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+S L+ ++ DLN + L+++ S
Sbjct: 223 VTFSGLINAL-VKEGDLNSAQDLLQEMIS 250
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 177/387 (45%), Gaps = 54/387 (13%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+G ++ I S N+L+ C C + AL F ++ G +P +++ L+ GLC + R+
Sbjct: 7 HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA L + M ++V + TL+ LC +G++ +A+ +L++++ GL+ +
Sbjct: 67 SEALDLFHQM--------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 118
Query: 263 RHRIDLCPCNDGEDIEG-----------------------------------AKSLINEA 287
I C G+ + A++L E
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+G P + +YS M + G+ E ++L EM + P +V + + AL K+G +
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV---------- 397
+ A ++++E M+ P V N LL GLCD+G A+ K M K +
Sbjct: 239 NSAQDLLQE-MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC + EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ M S++ P+I +++L+ C
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYC 384
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 202/431 (46%), Gaps = 26/431 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
+ +++ L +R++E ++ QM CK +V F T + R G++ EAV+L
Sbjct: 52 TFNTLLHGLCVEDRVSEALDLFHQM------CKPNVVTFTTLMNGLCREGRVVEAVALLD 105
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ T++ M K +A L + +K + + ++D L +
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKD 165
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGE 223
R A ++F EM +G +PD +Y ++ G C+ + +EA LL M R IS
Sbjct: 166 GRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS-----P 220
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG---EDIEGA 280
D+V + L+ AL +G + A +L++++ G+ + + C+ G + +E
Sbjct: 221 DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMF 280
Query: 281 KSL------INEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
K++ I+ G+ P + +Y+ + L NEG+ +E +++ +EM +G P V
Sbjct: 281 KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVT 340
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + + L K +DEA ++ + M +F P + +N L+ G C AG + +M
Sbjct: 341 YSSMINGLCKQSRLDEATQMFDS-MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G VAN TY L+ G + G + + +EM+ +P T ++ GL S +
Sbjct: 400 GRR-GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 454 QYEAVMWLEEM 464
+A+ LEE+
Sbjct: 459 LKKALAMLEEL 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +++ + L E R+ E + +M P++V + + L ++G V EA+ +
Sbjct: 48 PTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVAL 103
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ MV+ P Y ++ G+C G++ A+ L+KM + + Y ++DGL
Sbjct: 104 LDR-MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+DGR +A + EM + +P + TY+ +I G CS GK EA L+EM+ + PD+
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+S L+ ++ DLN + L+++ S
Sbjct: 223 VTFSGLINAL-VKEGDLNSAQDLLQEMIS 250
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 200/438 (45%), Gaps = 9/438 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + +I E+ D+M + V + +R AGQ ++AV F+ +
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ C + ++NT++ + K +L+ A I L + S N ++ C+ R
Sbjct: 223 SK-TCPPDSVTYNTMINGLSKSDRLDDA-IRLLEEMVDNGFAPNVFSYNTVLHGFCKANR 280
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL + ++M +GC PD SY ++ GLC +++EA ++ M Q+G +++
Sbjct: 281 VENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI----QRGCQPNVI 336
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ C G + A++++ K+ +G + + I C D+E A ++
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRR-NDMERAHQVLQM 395
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P +YS + G++ E +L++M +G P + + AL K
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D A E++ + P V Y+IL+ LC A A +L M K C + TY
Sbjct: 456 IDSAQELLRMS-IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKN-RCYPDVVTY 513
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+VDGLC+ R +A + + M P V TY+++I C A LE M
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573
Query: 467 QAKLPDISVWSSLVASVC 484
+PD+ +S+L+ +C
Sbjct: 574 AKCVPDVVTYSALINGLC 591
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 200/439 (45%), Gaps = 14/439 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ ++NR+ +++QM C + T I + Q++EA + +
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 327
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q C ++ TL+ + L+ A + +R + + N +M V C RR+
Sbjct: 328 QRGCQPNVITYGTLVDGFCRVGDLDGA-VELVRKMTERGYRPNAITYNNIMHVFC--RRN 384
Query: 168 DL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D+ A V Q M GC PD +Y ++ G C +L EA LL M R G D+
Sbjct: 385 DMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR----GCRPDV 440
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLI 284
TL+ ALC I A ++L + G+ AP + I + + + A+S +
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLR--MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ + P + +Y+++ L RI + + D MR G P +V Y + + KD
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+D A +++E M + VP V Y+ L+ GLC AG A ++M GC N
Sbjct: 559 NNLDSAFKMLER-MKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG-CGCAPNLV 616
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+DGLC+ + +A+ +LE M +S P TY LI GLC+ + EA L EM
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM 676
Query: 465 ISQAKLPDISVWSSLVASV 483
+ LPD + +L+ ++
Sbjct: 677 KDKGCLPDRMTYGTLLRAL 695
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 213/458 (46%), Gaps = 19/458 (4%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
F+E + P + Y +MI LS+S+R+ + ++++M + + T + +
Sbjct: 219 FREMSKTCPP---DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGF 275
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HILFLRSCYGWE 146
+A ++ A+ L + + C S+ T++ + K +++ A + R C
Sbjct: 276 CKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC---- 331
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L+D C+ D A+ + ++M +G P+ +Y+ +M C + A
Sbjct: 332 -QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAH 390
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L M Q G D + Y T++ C GK+++A +LE+++R+G + + +
Sbjct: 391 QVLQMMI----QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL 446
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C I+ A+ L+ ++ P + +YS + L R+ E + LD M
Sbjct: 447 IDALCKAAA-IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+P +V Y + + L K +++A ++ + M +P V Y+I++ C N A
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAF-LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSA 564
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L++M K+ CV + TY L++GLC+ G +A V +EML P + TYN LI
Sbjct: 565 FKMLERM-KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLID 623
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC I K +A LE M Q+ PD ++ L+ +C
Sbjct: 624 GLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 226/503 (44%), Gaps = 47/503 (9%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG 73
L Q + + K P AL++++ PN + +I L + I E++ +M
Sbjct: 850 LLQALLRLKRPKDALQVYRNKLCCSPNMF----TFTILIHGLCRAGDIGTAYELLKEMPR 905
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLE 132
+ I+ A +L+ A+ LFK + + +C +++T++ +VK K++
Sbjct: 906 HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 965
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + + L+ LC+ + D A + Q M GC P+ +Y+ +
Sbjct: 966 DACRL-VEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C R++EA HLL M G ++V Y LL A C GK +DA+ ++E ++
Sbjct: 1025 IDGHCKLGRIDEAYHLLEEMV----DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG P + L +++E A L++ + +G +P++ SY+ + L ++
Sbjct: 1081 EKGY-VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
EG +L++M + P +V + + A+ K VD A E+ G P + YN
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC-TPNLVTYNS 1198
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR----------------D 416
L+ GLC + A L++M+++ GC + TY ++DGLC+ D
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258
Query: 417 G------------------RFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G RF+ EA+ VLE ML + P TY LI G C G +A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ L+ ++S+ PD+ +S +
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFI 1341
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 221/465 (47%), Gaps = 20/465 (4%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+AL++FKE +E + + Y++++ L +S ++ + +++ M C +++
Sbjct: 930 SALELFKEMEES-GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS 988
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ +AG+L+EA +L + +++ C ++NT++ K +++ A+ L G
Sbjct: 989 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + +L+D C+C +++ A+ + + M +G P+ +Y+ L+ C + A
Sbjct: 1049 -CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL SM QKG ++V Y T++ LC K+ + + +LE++L +
Sbjct: 1108 CQLLSSMI----QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 1163
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RT 324
I C ++ A L N G P+L +Y+++ L R + + +L EM R
Sbjct: 1164 IIDAMCKTYR-VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----D 379
+G P ++ Y + L K VD A ++ + + G P Y+I++ LC D
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG-LAPDDVTYSIVISSLCKWRFMD 1281
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
N+ + +M LK G TYG L+DG C+ G +A +L+ +L + +P V
Sbjct: 1282 EANNVLELM-LKN-----GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+++ I L G+ +A LE M+ +PD +++L+ C
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 164/330 (49%), Gaps = 8/330 (2%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+ L + +R AL V++ C P+ ++ IL+ GLC + A LL M
Sbjct: 848 NCLLQALLRLKRPKDALQVYRNK--LCCSPNMFTFTILIHGLCRAGDIGTAYELLKEM-- 903
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G ++++++ ++ LC K+ A+++ +++ G P + +
Sbjct: 904 --PRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKS 961
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
++ A L+ + + +G P++ +YS++ L G++ E +L M G P++V Y
Sbjct: 962 GKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ K G +DEA ++EE MV G P V Y +LL C G + A+ ++ M
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEE-MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ G V N TY L+D C+ A ++L M+ + P V +YN +I GLC K
Sbjct: 1081 EK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+E V+ LE+M+S +PDI +++++ ++C
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 178/403 (44%), Gaps = 45/403 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++ ++ E+ YR N Y +++ + N + +V+ M C ++T
Sbjct: 354 AVELVRKMTER--GYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTI 411
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + +AG+L EA L + + + C +TL+ + K + +++A L LR G +
Sbjct: 412 ISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL-LRMSIGMD 470
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + ++L+ LC+ +R A M CYPD +Y+ ++ GLC RR+N+A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA- 529
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +F R+ G D+V Y ++ + C + A ++LE+ +K K
Sbjct: 530 ---FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLER-----MKEAKC----- 576
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+P + +YSA+ L G + + V EM G
Sbjct: 577 --------------------------VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+LV Y + L K V++A E++ E M K + P Y L+ GLC+A A
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEML-EIMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
L++M K GC+ + TYG L+ L + ++L+EM
Sbjct: 670 WRVLREM-KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 202/443 (45%), Gaps = 43/443 (9%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-------LRSCYG 144
+A Q ++A LF++ + T +++TL+ ++ K+ A+ LF L++ G
Sbjct: 138 KAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAG 197
Query: 145 WEVKSRIQSL---------------------------NLLMDVLCQCRRSDLALHVFQEM 177
KS ++ L N +++ L + R D A+ + +EM
Sbjct: 198 VH-KSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 256
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G P+ SY+ ++ G C R+ A LL M R G D+V Y T++ LC
Sbjct: 257 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR----GCPPDVVSYTTVINGLCK 312
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
++ +A ++++K++++G + + C G D++GA L+ + RG P+
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG-DLDGAVELVRKMTERGYRPNAI 371
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + + +VL M G P + Y ++ K G + EA +++ E+
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL-EQ 430
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M++ P V + L+ LC A + + L +MS + C + Y IL+ LC+
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAA-AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAK 489
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA L+ M+ +P V TYN ++ GLC + +A + + M + +PD+ +S
Sbjct: 490 RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYS 549
Query: 478 SLVASVCCNTADLNVCRKTLEQL 500
++ S C + +L+ K LE++
Sbjct: 550 IVIHSFCKDN-NLDSAFKMLERM 571
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 133/273 (48%), Gaps = 8/273 (2%)
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
W SQ+G D LL AL + +DA+Q+ L +P I +
Sbjct: 833 WATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL---CCSPNMFTFTILIHGLCR 889
Query: 274 GEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
DI A L+ E + R G+P ++ ++ + L + ++ ++ EM G P V
Sbjct: 890 AGDIGTAYELLKE-MPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV 948
Query: 333 M-YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y + +L K G VD+A ++E+ + KG P V Y+ LL GLC AG A L+
Sbjct: 949 FTYSTIVDSLVKSGKVDDACRLVEDMVSKGC-SPNVVTYSSLLHGLCKAGKLDEATALLQ 1007
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M++ GC N TY ++DG C+ GR EA +LEEM+ P V TY VL+ C
Sbjct: 1008 RMTRS-GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GK +A+ +E M+ + +P++ ++SL+ C
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 213/454 (46%), Gaps = 46/454 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K F E K + + Y ++IG+L ++ R+ E E+ +++ + + T
Sbjct: 292 AWKFFHEMKAQ--GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y AG+ +EA SL + + C+ ++N +L + ++ K+E A L + +
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA--LRIHDEMRQD 407
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+L+D+LC+ + AL V M G +P+ + +I++ LC ++L+EA
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+F + K D + +L+ L +G++ DA + EK+L
Sbjct: 468 ----SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML-------------- 509
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
D + I P++ Y+++ + + GR +G K+ EM +G
Sbjct: 510 ------DSDQI----------------PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L++ + + +FK G V++ + EE +G VP VR Y+IL+ GL AG S
Sbjct: 548 CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG-LVPDVRSYSILIHGLVKAGFSRET 606
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+M +Q G + Y ++DG C+ G+ +A ++LEEM + P V TY ++
Sbjct: 607 YKLFYEMKEQ-GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVD 665
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S ++ ++SSL+
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI 699
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 201/464 (43%), Gaps = 22/464 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P L T L ++ K ALK+ KE +PN MI L ++ ++ E
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM----TVNIMIDRLCKAQKLDE 465
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + C F + I R G++++A SL++ + + + + +L++
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 124 EMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
K + E H ++ R C + LN MD + + + +F+E+
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGC-----SPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA 580
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
QG PD SY IL+ GL E Y +F+ + ++G D++ Y T++ C G
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRET----YKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
K+ A Q+LE++ KGL+ P + + + ++ A L EA G ++ Y
Sbjct: 637 KVDKAYQLLEEMKTKGLQ-PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S++ GRI E +L+E+ KG P+ + L AL K +DEA +V + M
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA-QVCFQNMK 754
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
P Y+I++ GLC A ++ ++M KQ G N TY ++ GL + G
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQ-GLKPNNITYTTMIAGLAKAGNV 813
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+EA + + P YN +I GL S K +A + EE
Sbjct: 814 MEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 184/443 (41%), Gaps = 79/443 (17%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R Y ++IG LS +NR M + QM+ E +F T +R +AR G+++ A+
Sbjct: 199 FRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAAL 258
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
S LL EM K + A +L+ N+ +D
Sbjct: 259 S-------------------LLDEM-KSNSFTADLVLY----------------NVCIDC 282
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + D+A F EM QG PD +Y L+ LC RRL+EA L F +
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVEL----FEELDLNR 338
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
S + Y T++ GK +A +LE+ RKG
Sbjct: 339 SVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC------------------------ 374
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
IPS+ +Y+ + L +G++ E ++ DEMR P+L Y +
Sbjct: 375 ------------IPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDM 421
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G ++ AL+V ++ M + P + NI++ LC A A + +V C
Sbjct: 422 LCKAGELEAALKV-QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV-CS 479
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ T+ L+DGL R GR +A + E+ML P V Y LI+ G++ +
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539
Query: 461 LEEMISQAKLPDISVWSSLVASV 483
+EM+ + PD+ + +S + V
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCV 562
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 18/375 (4%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I + R + ++ +M C + + + +AG++ + +LF
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLM 158
+ + V +S++ L+ +VK + LF +E+K + + + N ++
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLF------YEMKEQGLHLDVLAYNTVI 629
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D C+ + D A + +EM +G P +Y ++ GL RL+EA Y +F
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA----YMLFEEAKS 685
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G ++VIY +L+ G+I +A ILE++++KGL P S L E+I+
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TPNSYTWNCLLDALVKAEEID 744
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ P+ +YS M L + + EM+ +G P+ + Y +
Sbjct: 745 EAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
A L K G V EA + + G VP YN +++GL A N A+ + + ++ G
Sbjct: 805 AGLAKAGNVMEARGLFDRFKASGG-VPDSACYNAMIEGLSSA-NKAMDAYIVFEETRLKG 862
Query: 399 CVANGETYGILVDGL 413
C N +T +L+D L
Sbjct: 863 CRVNSKTCVVLLDAL 877
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+++L+EM GF S + +A+ K + EA VIE M K F P Y L+
Sbjct: 153 EQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEM-MRKFKFRPAFSAYTTLI- 210
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G A N ++ L +++G AN + LV R+GR A +L+EM S+
Sbjct: 211 GALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFT 270
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ YNV I +GK A + EM +Q +PD +++L+ +C
Sbjct: 271 ADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 55/484 (11%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN--YRHNGPVYASMIGILSESNRITEM 64
R +TP L+ +++ QK P AL++FK K P+ +R++ Y +I L + EM
Sbjct: 5 RPITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEM 64
Query: 65 KEVIDQMKGDSC-ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+E++ Q+K ++ K+++F I Y RA A+ L L F +S+N+LL
Sbjct: 65 QEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLS 124
Query: 124 EMVKESKLEAAHILFLRSCYGWEV--KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ + LF+ G E K+ + NLL+ C R D A VF EM +G
Sbjct: 125 VFLMCKDFDKMRELFV----GIEKLGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRG 180
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGSGEDIVIYRTLLFALCDQG 239
P+ ++ L+ G C RL EA L M +R+ IY +L+ +C G
Sbjct: 181 VSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNA-----YIYASLIKGVCKNG 235
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A ++ ++++ R++I+L P A Y
Sbjct: 236 ELSLAFRLKKEMI----------RNKIELDP--------------------------AIY 259
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + L+ GR E V ++M+ +G+ P V Y + KD + A +++E +
Sbjct: 260 STLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVE 319
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG P V YN++L+ L + G A + M ++ GC + +Y IL DG C +F
Sbjct: 320 KGC-KPDVISYNVILRELFEEGKRGEANDLFEDMPRR-GCAPDVVSYRILFDGFCNGMQF 377
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA+ +L+EM+ + + PC + + LC GK + + + + KL ++ +W
Sbjct: 378 KEAAFILDEMIFKGFVPCSASICKFVNRLCE-GKNEDLLRSAFNTLEKGKLVNVDLWRMA 436
Query: 480 VASV 483
VA V
Sbjct: 437 VAMV 440
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWP 329
C G ++ A + +E RG P++ ++ + R+ E K+ +M + +P
Sbjct: 161 CASGR-LDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYP 219
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ +Y + + + K+G + A +++EM++ +Y+ L+ GL AG A+
Sbjct: 220 NAYIYASLIKGVCKNGELSLAFR-LKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGV 278
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ M K+ G + TY ++++ C+D F A R+L+EM+ + P V +YNV++R L
Sbjct: 279 WEDM-KERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELF 337
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GK+ EA E+M + PD+ + L C
Sbjct: 338 EEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFC 372
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 366 TVRVYNILLKGLC---DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
TV+ YN LL D + ++K+ K C TY +L+ G C GR +A
Sbjct: 115 TVKSYNSLLSVFLMCKDFDKMRELFVGIEKLGKADAC-----TYNLLIRGFCASGRLDDA 169
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVA 481
S+V +EM R P V T+ LI G C + EA +M+ ++ P+ +++SL+
Sbjct: 170 SKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIK 229
Query: 482 SVCCN 486
VC N
Sbjct: 230 GVCKN 234
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 208/461 (45%), Gaps = 47/461 (10%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S N+L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD ++ L+ GLC + R++EA + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----------------------- 279
+A+ +L++++ GL+ + I C G+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 280 ------------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAV 385
P +V Y A + A K+G EA E+ +E + +G +P YN ++ G C D ++A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG-IIPNTITYNSMIDGFCKQDRLDAAE 380
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ YL GC + T+ L+DG C R + +L EM R TYN LI
Sbjct: 381 DMFYLMATK---GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G C +G A+ ++MIS PDI ++L+ +C N
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 478
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 206/449 (45%), Gaps = 18/449 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K+ +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ A +GK +A ++ +++L +G+ P + + + + ++ A+ +
Sbjct: 326 VTYNALINAFVKEGKFFEAAELYDEMLPRGI-IPNTITYNSMIDGFCKQDRLDAAEDMFY 384
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+G P + +++ + RI +G ++L EM +G + V Y + G
Sbjct: 385 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV-------- 397
++ AL+ + ++M+ P + N LL GLCD G A+ K M K
Sbjct: 445 DLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 503
Query: 398 --GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC +
Sbjct: 504 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA M S++ P++ +++L+ C
Sbjct: 564 EATQMFVSMGSKSFSPNVVTFNTLINGYC 592
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 195/441 (44%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCY 143
I + + G+ EA L+ + + T ++N+++ K+ +L+AA +F L +
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + L+D C +R D + + EM +G + +Y+ L+ G C LN
Sbjct: 390 G--CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L M G DIV TLL LCD GK++DA+++ + + ++
Sbjct: 448 AALDLSQQMI----SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM----------QK 493
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
++DL + +E P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 494 SKMDLDASHPFNGVE---------------PDVLTYNILICGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ M +F P V +N L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS-MGSKSFSPNVVTFNTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VA+ Y L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ G S + AV LE++
Sbjct: 657 MLTGFWSKEELERAVAMLEDL 677
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 204/514 (39%), Gaps = 57/514 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + AL F + E R N + +++ L RI E
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALDFFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKE 124
++D+M D + + T + + G A++L + + + + + ++ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 125 MVKESKLEAAHILF----------------------------------LRSCYGWEVKSR 150
+ K+ + A LF L+ ++
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L++ + + A ++ EM +G P+ +Y+ ++ G C RL+ A
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE---- 380
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
MF+ ++ KG D+ + TL+ C +I D M++L ++ R+GL A + +
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT------ 324
C G D+ A L + + G P + + + + L + G++ + ++ M+
Sbjct: 441 CLVG-DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499
Query: 325 -----KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
G P ++ Y + L +G EA E+ EE +G VP Y+ ++ GLC
Sbjct: 500 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCK 558
Query: 380 AGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A M++ SK N T+ L++G C+ GR + + EM R
Sbjct: 559 QSRLDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 616
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
Y LI G +G A+ +EMIS PD
Sbjct: 617 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 37/366 (10%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L++ + R + + M +G P+ SY+ L++GLC R +EA L+ M
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------K 260
R + S D+V Y TLL C GK++++ ++L++++ +GL+ K
Sbjct: 72 ISRGGR--STPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCK 129
Query: 261 SRRH-----------RIDLCP-----------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
S R R CP C +++E A SL+ G + +
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVT 189
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L GR+ E +++L+ M+ G P +V Y + + L K G V A +V+E+ M
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ-M 248
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V YN +L GLC +G A+ +++M+ GC N Y +VDGLC+ GR
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA V+E M P V TY+ L+ GLC GK EAV + EM + P+ + S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 479 LVASVC 484
LV +C
Sbjct: 369 LVHGLC 374
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 174/404 (43%), Gaps = 82/404 (20%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+++TLL K K+E + L L+ ++ +M LC+ R AL + +E
Sbjct: 84 TYSTLLSGYCKAGKVEESREL-LKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEE 142
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC P +++ L+ G C ++ L A LL +M + G D+V Y TL+ LC
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM----AASGVKADVVTYNTLMDGLC 198
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G++Q+A Q+LE++ G P +
Sbjct: 199 KAGRLQEAEQLLERMKASGCA------------------------------------PDV 222
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE- 355
+YS+ L G+++ +VL++MR P++V Y L L K G +D ALE++E
Sbjct: 223 VAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQ 282
Query: 356 ----------------------------------EEMVKGTFVPTVRVYNILLKGLCDAG 381
E M + P V Y+ L+ GLC AG
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-----P 436
AV +++M+ + GC N TY LV GLC GR EA R++EEM P
Sbjct: 343 KIEEAVEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPP 401
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V TYN LI GLC G+ +A+ + + M SQ PD +S++V
Sbjct: 402 SVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 203/466 (43%), Gaps = 30/466 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P +T L KQ P ++ + A+ PN Y ++ L + R E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVS----YNGLLEGLCKLERWHE 63
Query: 64 MKEVIDQM--KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQS 117
+E++ M +G ++T + Y +AG++ E+ L K + + + + +T+
Sbjct: 64 AEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+L K LE + C + + N L+ C+ + ++A + Q M
Sbjct: 124 MASLCKSARLGEALELLEEMIRAGCC-----PTLITFNTLISGCCREKNLEMADSLLQTM 178
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G D +Y+ LM GLC RL EA LL R+ G D+V Y + ++ LC
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLL----ERMKASGCAPDVVAYSSFVYGLCK 234
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIP-S 295
GK+ +A Q+LE+ +R P + L C G+ I+ A ++ + G +
Sbjct: 235 SGKVLNAHQVLEQ-MRDSDHDPNVVTYNTILDGLCKSGK-IDTALEMMEQMASSDGCGLN 292
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ YS + L GR E V++ M G P +V Y + + L K G ++EA+E +
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG----CVANGETYGILVD 411
E ++G P Y L+ GLC G A A +++MS G C + TY L+
Sbjct: 353 EMAMEGCK-PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIG 411
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
GLC+ GR +A + + M + P +Y+ ++ GL G+ +A
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 193/436 (44%), Gaps = 43/436 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + + EV M C+ + + I AG++NEA+ LF ++
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ NC +++ L+ + + ++++LNL
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGR-------------------KVEALNL---------- 321
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
F EM +GC P+ +Y +L+ GLC + +++EA +L M S+KG +V
Sbjct: 322 -------FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM----SEKGLIPSVV 370
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +G I DA +IL+ ++ P +R + +C + A +L+N+
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L R PSL +Y+++ + ++L M G P Y + L K+G
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+EA + + KG V +Y L+ G C G VA L++M C+ N TY
Sbjct: 490 VEEAGTLFDSVKAKGVKANEV-IYTALIDGYCKVGKIDVAYSLLERMLND-ACLPNSYTY 547
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++GLC++ + EAS ++ +ML P V TY +LI + G A+ M+S
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Query: 467 QAKLPDISVWSSLVAS 482
PD+ +++ + +
Sbjct: 608 LGYQPDVCTYTAFLHA 623
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 223/512 (43%), Gaps = 58/512 (11%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
LTP+++S + P TAL F + P ++HN Y+SM+ IL + + +++
Sbjct: 66 LTPSHVSSLFAFNLDPQTALSFFNWIALR-PGFKHNVHSYSSMLNILIRARLLGVAEKIR 124
Query: 69 DQMKGDSCECKDSVFATAI-RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
M C +D +F + R G+ FK C +NT+L + K
Sbjct: 125 ISMIKSCCSIEDVLFVLEVFRKMNADGE-------FKFKPTLRC------YNTILMSLSK 171
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ ++L ++ I + N +++ C+ A ++ G +PD
Sbjct: 172 FLLIDEMKTVYLE-LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y L+ G C ++ ++ A Y +F + QKG + V Y L+ LC+ G+I +A+++
Sbjct: 231 TYTSLILGHCRNKGVDNA----YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCN-DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ P R + + + + G +E A +L NE +G P++ +Y+ + L
Sbjct: 287 FADMTEDNC-CPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
E ++ E K+L EM KG PS+V Y A + K+GM+D+A E++ + M + P
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-DLMESNSCGPN 403
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKM--------------------------------- 393
R YN L+ GLC A+ L KM
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 394 -SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ G V + TY + +D LC++GR EA + + + + Y LI G C +G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K A LE M++ A LP+ ++ L+ +C
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 215/499 (43%), Gaps = 32/499 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P + T T L + + AL +F E KEK PN Y +I L + N++ E
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH----TYTVLIDGLCKENKMDE 352
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++++ +M + I Y + G +++A + + +C T+++N L+
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ K+ K+ A L L ++ + + N L+ C+ + A + M+ G
Sbjct: 413 GLCKKRKVHKAMAL-LNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD+ +Y + + LC + R+ EA ++F + KG + VIY L+ C GKI
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAG----TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A +LE++L P S + + + + ++ A SL+ + L G P++ +Y+ +
Sbjct: 528 AYSLLERMLNDAC-LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
++ +G KV + M + G+ P + Y A L A F GM++E +VI + +G
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG-I 645
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE-- 421
+P + Y +L+ G G + A +LK M GC + IL+ L + R E
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMV-DTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 422 ----------------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
A ++ E+M+ V Y LI G C + EA + M
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 764
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P +++SL+ C
Sbjct: 765 ERGMSPSEDIYNSLLDCCC 783
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 201/473 (42%), Gaps = 47/473 (9%)
Query: 10 TPTYLSQIIK--KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
T TY S I+ + K A ++F +K + N Y ++I L E+ RI E ++
Sbjct: 229 TFTYTSLILGHCRNKGVDNAYEVFLIMPQK--GCQRNEVSYTNLIHGLCEAGRINEALKL 286
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
M D+C + I + +G+ EA++LF + + C ++ L+ + K
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
E+K++ A + + S + + N L+D C+ D A + M+ C P+
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPS-VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ L+ GLC R++++A LL M R ++ Y +L+ C ++ A ++
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLER----KLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L SL+NE G +P +YS L
Sbjct: 462 L---------------------------------SLMNE---NGLVPDQWTYSVFIDTLC 485
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
EGR+ E + D ++ KG + V+Y A + K G +D A ++ E M+ +P
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL-ERMLNDACLPNS 544
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN+L++GLC A + KM +G TY IL+ + +DG F A +V
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKM-LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M+ Y P V TY + S G E + +M + LPD+ ++ L+
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 181/426 (42%), Gaps = 38/426 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ I L + R+ E + D +K + + ++ I Y + G+++ A SL + +
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ + ++N L++ + KE K++ A L + VK + + +L+ + +
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM-LTMGVKPTVVTYTILIGEMLKDGA 594
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL VF M G PD +Y + + L E ++ M +++G D+V
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM----NEEGILPDLV 650
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAP-----------------KSRRHRIDLC 269
Y L+ G A L+ ++ G K K R I +
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
++ + E A L + + G ++ Y A+ + R+ E ++ M+ +G P
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS--AVAV 387
S +Y + L K G+ EA+ +++ MV+ +P + Y +L+ GL G++ A AV
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDA-MVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829
Query: 388 MYLKKMSKQVGCVANGETYG-----ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+ G ++ G Y +L+DGL + E S +++ M + P TY+
Sbjct: 830 FH--------GLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYS 881
Query: 443 VLIRGL 448
+LI GL
Sbjct: 882 LLIEGL 887
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E V E+L P + T+N ++ G C IG EA ++ +++ PD ++SL+
Sbjct: 177 EMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLI 236
Query: 481 ASVCCN 486
C N
Sbjct: 237 LGHCRN 242
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 194/438 (44%), Gaps = 42/438 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + AG LNEA F L + S N L + + + +
Sbjct: 41 VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V +S N+LM+ L + + A H+ M+F+GC PD SY ++ G C+
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGE 160
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L + L+ M KG ++ Y +++ LC GK+ + ++L +++++G+
Sbjct: 161 LQKVVQLVKEM----QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G + + A L +E R +P ++SA+ L G++VE DK+ +E
Sbjct: 217 IYTTLIDGFCKLG-NTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 322 MRTKGF-----------------------------------WPSLVMYEAKLAALFKDGM 346
M KGF P++V Y A L K G
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D A E++ E KG + + YN ++ GLC AGN AV +++M K+ G + TY
Sbjct: 336 LDTANELLHEMCRKGLQL-NISTYNTIVNGLCKAGNILQAVKLMEEM-KEAGLHPDTITY 393
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+D + G ++A +L EML R P V T+NVL+ GLC GK + L+ M+
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453
Query: 467 QAKLPDISVWSSLVASVC 484
+ +P+ + ++S++ C
Sbjct: 454 KGIMPNAATYNSIMKQYC 471
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 214/504 (42%), Gaps = 47/504 (9%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYR--HNGPVYASMIGILSESNRITEMKEVIDQ 70
YL+ + K+ LK+F E +P N Y ++ L +I E ++ +
Sbjct: 80 YLTCLSSKRDMLGMVLKVFSE----FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMR 135
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M+ C + T I Y G+L + V L K + ++++++ + K K
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ + LR V L+D C+ + A +F EM+ + PD ++
Sbjct: 196 VVEGEKV-LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFS 254
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GL ++ EA L M +KG D V Y L+ C G+++ A + +
Sbjct: 255 ALICGLSGSGKVVEADKLFNEMI----KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQ 310
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+++ GL + C GE ++ A L++E +G ++++Y+ + L G
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGE-LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAG 369
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I++ K+++EM+ G P + Y + A +K G + +A E++ E + +G PTV +
Sbjct: 370 NILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG-LQPTVVTF 428
Query: 371 NILLKGLCDAG-------------------NSAVAVMYLK--------KMSKQV------ 397
N+L+ GLC +G N+A +K ++S ++
Sbjct: 429 NVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCA 488
Query: 398 -GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G V + TY IL+ G C+ EA + +EM+ + + +YN LI+G K E
Sbjct: 489 QGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLE 548
Query: 457 AVMWLEEMISQAKLPDISVWSSLV 480
A EEM + + +++ V
Sbjct: 549 ARQLFEEMRREGLVASAEIYNLFV 572
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 163/392 (41%), Gaps = 45/392 (11%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRIT 62
+P + T L K + A K+F E A+E P+ ++++I LS S ++
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPD----SIAFSALICGLSGSGKVV 267
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E ++ ++M E + + I Y + G++ +A L + Q ++ L
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K +L+ A+ L C ++ I + N +++ LC+ A+ + +EM G
Sbjct: 328 DGLCKSGELDTANELLHEMCRKG-LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGL 386
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD +Y LM + +A LL M R G +V + L+ LC GK++
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLREMLDR----GLQPTVVTFNVLMNGLCMSGKLE 442
Query: 243 DAMQILEKILRKGLK----------------------------------APKSRRHRIDL 268
D ++L+ +L KG+ P S + I +
Sbjct: 443 DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+++ A L E + + + +SY+A+ + +++E ++ +EMR +G
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLV 562
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
S +Y + +++G ++ LE+ +E + K
Sbjct: 563 ASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 161/340 (47%), Gaps = 7/340 (2%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ V + SLN+L++ LC+ A+ V +M G PD +++ L+ G C + + E
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L M R G D++ Y T++ LC G A+Q+L K+ KG K
Sbjct: 181 AVGLFNEMVRR----GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYT 236
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C D + A L++E + RG P + +YS + + G + E + +EM
Sbjct: 237 TIIDSLCKDTL-VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P+ V + + L K+GMV EA + E M K P YN L+ G C
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEA-RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L M + GC +Y IL++G C+ R EA +L EM + P TY+ L
Sbjct: 355 EAQKVLDIMVDK-GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++GLC +G+ EA+ +EM S LPD+ +S+L+ +C
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 185/402 (46%), Gaps = 16/402 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + + A+ Q + VSL + F + S N L+ + + + H++F S
Sbjct: 95 FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN-----HVVFAISV 149
Query: 143 YGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
G K IQ + N L++ C A+ +F EM +G PD SY ++ GLC
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ A LL M +KG ++V Y T++ +LC + DAM +L +++ +G+
Sbjct: 210 SGNTSMALQLLRKM----EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
I C+ G + A L NE + R +P+ +++ + L EG + E V
Sbjct: 266 DVVTYSTILHGFCSLGH-LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCV 324
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+ M KG P+ Y A + + +DEA +V++ + KG P V YNIL+ G C
Sbjct: 325 FEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC-APVVHSYNILINGYC 383
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A L +MS++ + TY L+ GLC+ GR EA + +EM P +
Sbjct: 384 KRRRLDEAKSLLVEMSEK-ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY+ L+ GLC G EA+ L+ M PDI +++ L+
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 197/469 (42%), Gaps = 35/469 (7%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN +I L N + V+ +M + F T I G++ EAV L
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
F + + S++T++ + K A + LR K + + ++D LC
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMA-LQLLRKMEEKGCKPNLVAYTTIIDSLC 243
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR------- 215
+ + A+ + EM +G PD +Y ++ G C+ LNEAT L M R
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTV 303
Query: 216 ------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+++KG+ + Y L+ C ++ +A ++L+ +
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+ KG AP + I + ++ AKSL+ E + P +YS + L GR
Sbjct: 364 VDKGC-APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
E + EM + G P L+ Y L L K G +DEAL++++ M + P + +YN
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS-MQESKIEPDIVLYN 481
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
IL++G+ AG VA K+ G TY I++ GL ++G EA + +M
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFAD-GIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED 540
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P +YNV+I+G A+ ++EM+ + D S + L+
Sbjct: 541 DGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+V VL +M G P + + + +G + EA+ + E MV+ P V Y
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNE-MVRRGHQPDVISY 200
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD-------------- 416
+ ++ GLC +GN+++A+ L+KM ++ GC N Y ++D LC+D
Sbjct: 201 STVINGLCKSGNTSMALQLLRKMEEK-GCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259
Query: 417 ---------------------GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G EA+ + EM+ R+ P T+ +L+ GLC G
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EA E M + P+ +++L+ C N
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLN 350
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 363 FVPTVRVY--NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
F T VY NIL+ LC + A+ L KM K +G + T+ L++G C +G
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFK-LGIQPDAITFNTLINGRCIEGEIK 179
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA + EM+ R + P V +Y+ +I GLC G A+ L +M + P++ +++++
Sbjct: 180 EAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTII 239
Query: 481 ASVCCNT 487
S+C +T
Sbjct: 240 DSLCKDT 246
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 205/441 (46%), Gaps = 20/441 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I ++N + E ++++++MK + + + QL E L + +
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ T S+NT++ + + K E A + L + + + N LMD C+ +
Sbjct: 224 VEAGREPDTFSYNTVVACLCESGKYEEAGKI-LEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + ++M + C P +Y L+ G RL +A ++ MF + G D+V
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF----KAGISPDLV 338
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSL 283
Y LL LC GK+++A ++LE ++ K AP + I LC +D A+ L
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDC-APDVVTYSILVNGLCKLGKVDD---ARLL 394
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ L RG P+L +++ M G++ EG KVL+ M+ P +V Y + K
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ +A ++ P Y+ +L+GLC G A + M+KQ GC
Sbjct: 455 ANRMQDAFAIL-------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQ-GCPPTS 506
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y +++ GLC R EA ++L+ M R P + TY++LI GLC + +A+ L+
Sbjct: 507 SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDV 566
Query: 464 MISQAKLPDISVWSSLVASVC 484
M+ + +PD++ ++SL+ C
Sbjct: 567 MLEKGCVPDVATYTSLIDGFC 587
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 201/439 (45%), Gaps = 18/439 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + N++ E+ +++++M E + T + +G+ EA + + +
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C ++N+L+ K SK++ A L L G + + L+ + R
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERL-LEDMVGRRCAPTVITYTTLIGGFSRADRL 318
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A V ++M G PD +Y+ L+ GLC +L EA LL M +K D+V
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV----EKDCAPDVVT 374
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK--SLIN 285
Y L+ LC GK+ DA +LE +L +G + + + C G+ EG K L+
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E P + +YS + ID Y + +++ D G P Y + L L G
Sbjct: 435 EV---SCTPDVVTYSTL-IDGY-----CKANRMQDAFAILGISPDKASYSSMLEGLCSTG 485
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
V+EA EV++ M K PT Y +++ GLCD A+ L+ MS++ GC N T
Sbjct: 486 KVEEAQEVMDL-MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER-GCEPNLYT 543
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y IL++GLC+ R +A VL+ ML + P V TY LI G C I K A + M
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Query: 466 SQAKLPDISVWSSLVASVC 484
PD ++ L++ C
Sbjct: 604 DSGCEPDKLAYNILISGFC 622
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 214/461 (46%), Gaps = 12/461 (2%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL F+E + P+ N Y ++I S + + E+ ++M
Sbjct: 5 PLEGYSFFRE-RFSDPSKPSNS-TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITH 62
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T ++ Y + G L+ A+S F+ + C ++ L+ + + +++ A+ L L
Sbjct: 63 NTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQL-LDEMI 119
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ N L+ LC+ + D A +V + M + C PD +Y L+ G C L+
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA L+ M + G D V Y LL LC Q ++++ ++LE+++ G +
Sbjct: 180 EARKLMEKM----KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C C G+ E A ++ + + + P + +Y+++ ++ E +++L++M
Sbjct: 236 NTVVACLCESGK-YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+ P+++ Y + + + +A V+E+ M K P + YN LL GLC AG
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMED-MFKAGISPDLVTYNCLLDGLCKAGKL 353
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L+ M ++ C + TY ILV+GLC+ G+ +A +LE ML R P + T+N
Sbjct: 354 EEAHELLEVMVEK-DCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+I G C GK E LE M + PD+ +S+L+ C
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
P H YA +IG L + R E +++ M CE ++ I + ++ +
Sbjct: 504 PTSSH----YALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVED 559
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+++ + + CV ++ +L+ K +K++AA+ F ++ + + N+L+
Sbjct: 560 AINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCF-KTMRDSGCEPDKLAYNILI 618
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
CQ + A+ V Q M +GC PD +Y LM+ L
Sbjct: 619 SGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 12/408 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HI 136
+ T I+ +++EA LF + + C ++ TL+K + + + A +
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM 222
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L S YG K + + ++++D LC+ R D A +F+EM QG PD SY L+ G
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + +++ HL F + +G D+V + L+ LC +GK+ +A ++LE ++++G+
Sbjct: 283 CCAGKWDQSKHL----FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C G D+ A+ L +G P SY+ + ++ E
Sbjct: 339 VPNLITYNSLIDGFCMVG-DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ +EM G P++ Y L LF+ G V +A ++ G + ++Y I L G
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS-QIYGIFLDG 456
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + M L K N E Y L+DGLC+ G+ A + E++ P
Sbjct: 457 LCK-NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TYN++I G C +G+ A + E+M PDI +++L+ C
Sbjct: 516 DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 182/400 (45%), Gaps = 24/400 (6%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG----WEVKSRIQS 153
+A F + + + + SFN LL + K H L S Y + + +
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAK-----INHYSQLFSLYNEMRLAGLSPDLFT 128
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L++L + LC R AL + +G P+ +Y L+KGLC + R++EAT L F
Sbjct: 129 LSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL----F 184
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-----APKSRRHRIDL 268
R+ + G + V Y TL+ LC G + A+++ +++L + P + I +
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 269 -CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G + E AK L E +G IP + SYS + G+ + + DEM +G
Sbjct: 245 DGLCKVGREDE-AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVA 386
P +V + + L K+G V EA +++ E M++ VP + YN L+ G C G+ ++
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLL-EVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++L SK G + +Y L++G C+ + EA + EML P V TY L++
Sbjct: 363 ELFLSMPSK--GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GL GK +A M + + ++ + +C N
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 179/412 (43%), Gaps = 12/412 (2%)
Query: 27 ALKIFKEAKEKYPNYRHN-GP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
ALK+ KE Y N P Y+ +I L + R E KE+ ++MK
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++T I + AG+ +++ LF + +F+ L+ + KE K+ A L L
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL-LEVM 333
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + N L+D C + A +F M +G PD SY L+ G C ++
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKV 393
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA +L M Q G ++ Y TLL L +GK+ DA ++ + G+ A S+
Sbjct: 394 KEAMNLYNEML----QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSA-NSQ 448
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I L + + A L NE ++ +YS + L G++ ++ +++
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P +V Y + K G VD A ++ E+M + P + YN LL G C+
Sbjct: 509 SQEGLQPDVVTYNIMIHGFCKVGQVDNA-NILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+ L KM Q N + I+VD LC+D ++ + +L + ++ +
Sbjct: 568 LEEVIKLLHKMV-QKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 221/484 (45%), Gaps = 24/484 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++++++ A++ + A+ + P + H A ++ +L + + E +
Sbjct: 91 LDPFVVNRVLRSISDSEMAVRFYWWAESR-PGFDHTQFAIAYVVSLLFVDSNFFLLSEFL 149
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++++ S++ + Y RAG+ + + F + C + +N + +VK
Sbjct: 150 ERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKN 209
Query: 129 SKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + + G+ + S S + LCQ R +L + +MD GC+PD
Sbjct: 210 CCFDLVEKYYSVALDKGFCLTSFTYSR--WISALCQSERIELVERLLADMDKFGCFPDIW 267
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+ +I + LC RL++A L +M+ R G+ D+V Y T++ LCD + +A+++
Sbjct: 268 ACNIYVDCLCKHNRLHDALKTLENMWIR----GTNPDVVTYTTVVGCLCDNKQFAEAVEL 323
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYS 300
E+++R+GLK D+ C + ++ A L L ++ Y+
Sbjct: 324 WEEMVRRGLKP--------DIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYN 375
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
A+ G I + K++ MRT G P +V Y +L GM+ EA ++IEE +
Sbjct: 376 ALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMS 435
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P YN +LKGLC A A ++ +VG + + IL+D C+ +
Sbjct: 436 GIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSD-HMEVGGFCDIVSCNILIDAFCKAKKVS 494
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
A ++ +EM + TY LI GL +G Y A E+M+ +P++++++ ++
Sbjct: 495 SALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIML 554
Query: 481 ASVC 484
++C
Sbjct: 555 HNLC 558
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I ++ +++ ++ +M + + T I G A +F+ + +
Sbjct: 483 LIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKAR 542
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
V +N +L + K + E A +FL+ EV I + N L+ L +C R+ A
Sbjct: 543 VVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQK-EVSPDIITFNTLIYWLGKCSRAIEA 601
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ +F++M +G PD ++ L+ GL + + +A
Sbjct: 602 IDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQA 636
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 8/173 (4%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT---FVPTVRVYNIL 373
+ L+ +R++G +Y L+ + G D + +E + G V R +L
Sbjct: 147 EFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVL 206
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+K C V Y + K G TY + LC+ R R+L +M
Sbjct: 207 VKNCC---FDLVEKYYSVALDK--GFCLTSFTYSRWISALCQSERIELVERLLADMDKFG 261
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+P + N+ + LC + ++A+ LE M + PD+ ++++V +C N
Sbjct: 262 CFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDN 314
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 19/400 (4%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+++EAV +F+ +++ N + S+ L+ + K KL A LF + + S +
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+L+ LC D A +F +M+ +GC P +Y++++ C L EA L+ M
Sbjct: 363 SLIHG-LCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI- 420
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR---IDLC-- 269
+ G D+V Y T++ LC ++++A+ + ++ R G P R H + LC
Sbjct: 421 ---EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQ 476
Query: 270 -----PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
C G+ ++ A L+ G +P + +YS + L + R+ + +L++M
Sbjct: 477 SKIDQACQRGK-LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P++V + L K G + EA EV++ MV P V YN L+ G C AG +
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA-MVSSGQSPDVVTYNTLVHGHCRAGQTE 594
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L M + G N TY LV GLC+ R EA V +M P + TY L
Sbjct: 595 RARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I G CS G+ + EM+ PD V+ +L A +C
Sbjct: 654 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 205/453 (45%), Gaps = 22/453 (4%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A+ + H+G Y S+I L +N + +E+ M C +
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 398
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + G L EA L K + + V ++NT++ + K S++E A +LF
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 458
Query: 146 EVKSRIQSLNLLMDVLCQ-------CRRS--DLALHVFQEMDFQGCYPDRESYHILMKGL 196
+R +S N ++ LCQ C+R D A + + M G PD +Y L+ GL
Sbjct: 459 CTPNR-RSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C+ R+++A HLL M R + +V TL+ LC G+I++A ++L+ ++ G
Sbjct: 518 CSIARVDDARHLLEDMVKRQCKP----TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C G+ E A+ L+++ + RG P++ +Y+A+ L R+ E
Sbjct: 574 SPDVVTYNTLVHGHCRAGQ-TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
V +M++ G P+L Y A + G VD L++ E MV P VY L
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE-MVCAGISPDHVVYGTLAAE 691
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC +G SA A+ L++ + + A G E Y VDGL G+ A + +M+
Sbjct: 692 LCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQL 751
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
P E L+ GLC G+ EA LEE++ A
Sbjct: 752 PAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 784
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 212/465 (45%), Gaps = 13/465 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++F++ E+ N + Y +I L+++ ++ + + + ++ + +
Sbjct: 307 AVQMFEKMNER--NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I A ++A LF ++++ C ++N ++ K LE A L +
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH 424
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N +MD LC+ R + AL +F EM+ GC P+R S++ ++ GLC ++++A
Sbjct: 425 VPD-VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483
Query: 207 HL-----LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ + R++ G D+V Y TL+ LC ++ DA +LE ++++ K
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
++ + C G I+ A+ +++ + G P + +Y+ + G+ ++L +
Sbjct: 544 TQNTLIHGLCKAGR-IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P++V Y A ++ L K + EA V + G P + Y L+ G C AG
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC-APNLFTYTALILGFCSAG 661
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--IRSYWPCVE 439
+ +M G + YG L LC+ GR A +L E +RS E
Sbjct: 662 QVDGGLKLFGEMV-CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 720
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y + GL GK A+ ++ +M+ +LP +SLVA +C
Sbjct: 721 VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC 765
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 212/455 (46%), Gaps = 27/455 (5%)
Query: 45 GPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFK 104
G + + ++G++ +S RI E +V + + + C +V + + GQ+++A L +
Sbjct: 181 GSLDSVLVGLM-DSGRIDEALQVYRENRREPCLVTLNVL---LEGFCSRGQVDKARELLR 236
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMD 159
+ C S+ T+L + K ++E A LF S ++ N+++
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVIL 296
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LCQ R D A+ +F++M+ + PD SY IL+ GL +LN+A +L F ++
Sbjct: 297 GLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL----FQKLLHS 352
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIE 278
G V Y +L+ LC DA ++ + R+G +P + ID C G +E
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID-ASCKRGM-LE 410
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY---- 334
A LI + + G +P + +Y+ + L R+ E + +EM G P+ +
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 335 -----EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++K+ + G +DEA +++ M VP V Y+ L+ GLC A
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKR-MTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L+ M K+ C T L+ GLC+ GR EA VL+ M+ P V TYN L+ G C
Sbjct: 530 LEDMVKR-QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ A L +M+++ P++ +++LV+ +C
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 210/502 (41%), Gaps = 78/502 (15%)
Query: 27 ALKIF---KEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
A+KIF +E YP+ VY +I LS+ +K+++ M C F
Sbjct: 29 AVKIFSLMEECHSPYPD------VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTF 82
Query: 84 ATAIRTYARAGQLNEA-----------VSLFKNLSQFN----CVNWTQSFNTLLKEMVKE 128
T + +AG+++EA + + S F C+ + L E++
Sbjct: 83 TTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV 142
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQ---------------SLNLLMDVLCQCRRSDLALHV 173
+ A +I+ + C V ++ SL+ ++ L R D AL V
Sbjct: 143 ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQV 202
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
++E + C + ++L++G C+ ++++A LL +M + D V Y T+L
Sbjct: 203 YRENRREPCLV---TLNVLLEGFCSRGQVDKARELLRAM----PDEECAPDEVSYCTVLD 255
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC G++++A+++ G + L + +
Sbjct: 256 GLCKAGRVEEAVRLF------------------------------GDRELPSSSSSSSSP 285
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PSL Y+ + + L RI E ++ ++M + P Y + L K G +++A +
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ + G P+ Y L+ GLC A + A M+++ GC + TY +++D
Sbjct: 346 FQKLLHSGV-TPSTVAYTSLIHGLCMANSFDDARELFADMNRR-GCPPSPVTYNVMIDAS 403
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G EA ++++M+ + P V TYN ++ GLC + EA++ EM P+
Sbjct: 404 CKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNR 463
Query: 474 SVWSSLVASVCCNTADLNVCRK 495
++++ +C + C++
Sbjct: 464 RSHNTIILGLCQQSKIDQACQR 485
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 219/477 (45%), Gaps = 11/477 (2%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++++++ A++ + A+ + P + HN A +I +L + + E +
Sbjct: 90 LDPFVVNKVLRGLLDSGMAVRFYWWAESR-PGFYHNNFAIAYIISLLFVDDNFALLSEFL 148
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+++ S++ + YARAG+ + + F + C + +N + M+K
Sbjct: 149 GRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKN 208
Query: 129 SKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + + G+ + S + LCQ R +L + +MD GC+PD
Sbjct: 209 CCFDLVEKYYNMALAKGFCLTPFTYSR--WITALCQSNRIELVEELLTDMDKFGCFPDFW 266
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+ +I + LC RL +A ++ M + KG+G D+V Y T++ LCD + +A+ +
Sbjct: 267 ACNIYVHYLCGHNRLYDALQMVEKM----TMKGTGPDVVTYTTVVSCLCDHRRFSEAVGL 322
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
E+++R+GLK + C + + ++ A L + L +++ Y+A+ +
Sbjct: 323 WEEMVRRGLKPDVVACGALIFGLCKN-QKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G I + K + M+ G P +V Y L GM D+A +I + + G P
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGV-NPDR 440
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YNILLKGLC A A ++ +VG + + IL+D CR + A + +
Sbjct: 441 YSYNILLKGLCKAHQLDKAFAFVSD-HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFK 499
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM + TY +LI GL IG A ++M++ +P+++V++ ++ ++C
Sbjct: 500 EMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLC 556
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 155/366 (42%), Gaps = 46/366 (12%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQM-----KGDSCECKDSVFATAIRTYARA 93
+ GP Y +++ L + R +E + ++M K D C +F +
Sbjct: 294 KGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLC-----KN 348
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH--ILFLR--SCYGWEVKS 149
+++EA L + + +N L+ + +E A+ + F++ C +
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC-----EP 403
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + N+L++ C +D A ++ ++M+ G PDR SY+IL+KGLC +L++A
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKA---- 459
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
++ + G DIV L+ A C K+ A+ + +++ KG++A
Sbjct: 460 FAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQAD---------- 509
Query: 270 PCNDGEDIEG---------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
G I G A+ L ++ L +P++ Y+ M +L G K+
Sbjct: 510 AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFW 569
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M K P V + + L K EAL++ +E KG P + ++ GL D
Sbjct: 570 QMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGV-EPDNLTFRYIISGLLDE 628
Query: 381 GNSAVA 386
G + +A
Sbjct: 629 GKATLA 634
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + I + + + M+ + CE + + Y G ++A +L
Sbjct: 369 NVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLI 428
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + S+N LLK + K +L+ A F+ I S N+L+D C+
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKA-FAFVSDHMEVGGFCDIVSCNILIDAFCR 487
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
++ + AL++F+EM ++G D +Y IL+ GL N A L M
Sbjct: 488 AKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML----NTKIVP 543
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++ +Y +L LC G + A +I ++ +K +
Sbjct: 544 NVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS-------------------------- 577
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P +++ + L R VE + EMRTKG P + + ++ L
Sbjct: 578 ----------PDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLD 627
Query: 344 DGMVDEALEVIEEEMVKG 361
+G A E+ E M G
Sbjct: 628 EGKATLAYEIWEYMMENG 645
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ DEM T G V Y + + K+ D + + KG F T Y+ +
Sbjct: 181 ETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKG-FCLTPFTYSRWITA 239
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + + L M K GC + I V LC R +A +++E+M ++ P
Sbjct: 240 LCQSNRIELVEELLTDMDK-FGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGP 298
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TY ++ LC + EAV EEM+ + PD+ +L+ +C N
Sbjct: 299 DVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 219/477 (45%), Gaps = 11/477 (2%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++++++ A++ + A+ + P + HN A +I +L + + E +
Sbjct: 90 LDPFVVNKVLRGLSDSGMAVRFYWWAESR-PGFYHNNFAIAYIISLLFVDDNFALLLEFL 148
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+++ S++ + YARAG+ + + F + C + +N + M+K
Sbjct: 149 GRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKN 208
Query: 129 SKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + + G+ + S + LCQ R +L + +MD GC+PD
Sbjct: 209 CCFDLVEKYYNMALAKGFCLTPFTYSR--WITALCQSNRIELVEELLTDMDKFGCFPDFW 266
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+ +I + LC RL +A ++ M + KG+G D+V Y T++ LCD + +A+ +
Sbjct: 267 ACNIYVHYLCGHNRLYDALQMVEKM----TMKGTGPDVVTYTTVVSCLCDHRRFSEAVGL 322
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
E+++R+GLK + C + + ++ A L + L +++ Y+A+ +
Sbjct: 323 WEEMVRRGLKPDVVACGALIFGLCKN-QKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G I + K + M+ G P +V Y L GM D+A +I + + G P
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGV-NPDR 440
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YNILLKGLC A A ++ +VG + + IL+D CR + A + +
Sbjct: 441 YSYNILLKGLCKAHQLDKAFAFVSD-HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFK 499
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM + TY +LI GL IG A ++M++ +P+++V++ ++ ++C
Sbjct: 500 EMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLC 556
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 155/366 (42%), Gaps = 46/366 (12%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQM-----KGDSCECKDSVFATAIRTYARA 93
+ GP Y +++ L + R +E + ++M K D C +F +
Sbjct: 294 KGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLC-----KN 348
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH--ILFLR--SCYGWEVKS 149
+++EA L + + +N L+ + +E A+ + F++ C +
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC-----EP 403
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + N+L++ C +D A ++ ++M+ G PDR SY+IL+KGLC +L++A
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKA---- 459
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
++ + G DIV L+ A C K+ A+ + +++ KG++A
Sbjct: 460 FAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQAD---------- 509
Query: 270 PCNDGEDIEG---------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
G I G A+ L ++ L +P++ Y+ M +L G K+
Sbjct: 510 AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFW 569
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M K P V + + L K EAL++ +E KG P + ++ GL D
Sbjct: 570 QMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGV-EPDNLTFRYIISGLLDE 628
Query: 381 GNSAVA 386
G + +A
Sbjct: 629 GKATLA 634
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + I + + + M+ + CE + + Y G ++A +L
Sbjct: 369 NVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLI 428
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + S+N LLK + K +L+ A F+ I S N+L+D C+
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKA-FAFVSDHMEVGGFCDIVSCNILIDAFCR 487
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
++ + AL++F+EM ++G D +Y IL+ GL N A L M
Sbjct: 488 AKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML----NTKIVP 543
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++ +Y +L LC G + A +I ++ +K +
Sbjct: 544 NVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS-------------------------- 577
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P +++ + L R VE + EMRTKG P + + ++ L
Sbjct: 578 ----------PDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLD 627
Query: 344 DGMVDEALEVIEEEMVKG 361
+G A E+ E M G
Sbjct: 628 EGKATLAYEIWEYMMENG 645
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ DEM T G V Y + + K+ D + + KG F T Y+ +
Sbjct: 181 ETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKG-FCLTPFTYSRWITA 239
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + + L M K GC + I V LC R +A +++E+M ++ P
Sbjct: 240 LCQSNRIELVEELLTDMDK-FGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGP 298
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TY ++ LC + EAV EEM+ + PD+ +L+ +C N
Sbjct: 299 DVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 216/472 (45%), Gaps = 61/472 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ +L + ++ E ++++ MK + + F + Y + G L EA + ++
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC----- 162
Q N + ++N L+ + K+ K++ A + +K +++L LL DV+
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEA----------FRLKDEMENLKLLPDVVTYNTLI 359
Query: 163 ----QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
C S + +M+ +G P+ +Y++++K + +++ A + L M +
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM----EE 415
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D V + TL+ C G++ +A ++++++ RKGLK + I C + ++
Sbjct: 416 SGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE-RKLD 474
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A L++ A RG SY + + + +G+ VE K+ DEM+ K PS++ Y +
Sbjct: 475 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMI 534
Query: 339 AALFKDGMVDEALEVIEE----------------------------------EMVKGTFV 364
L G D++++ + E +MVK +F
Sbjct: 535 GGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFK 594
Query: 365 PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + NILL+GLC G A+ ++ +SK G + TY ++ GLC++ RF EA
Sbjct: 595 PDLFTCNILLRGLCTEGMLDKALKLFNTWISK--GKAIDAVTYNTIISGLCKEDRFEEAF 652
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+L EM + P TYN ++ L G+ EA ++ ++ Q KL D ++
Sbjct: 653 DLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTI 704
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 201/447 (44%), Gaps = 23/447 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK-----GDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ + IG NR ++ ++MK + C + A+ Y + + +
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTC--NTLINALVRYPSKPSVYLSKA 198
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLL 157
+F ++ + T +FN L+ E+KL A L + SC+ V S N +
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNV-----SYNTI 253
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+DVLC+ + + A + +M G P+R +++IL+ G C L EA ++ M +
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM----A 309
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
Q D+ Y L+ LC GKI +A ++ +++ L P + + C D
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKL-LPDVVTYNTLINGCFDCSSS 368
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
LI++ +G P+ +Y+ + EG++ L +M GF P V +
Sbjct: 369 LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K G + EA +++E KG + +V + N +L LC A L SK+
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL-NTILHTLCGERKLDDAYKLLSSASKR- 486
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + +YG L+ G +DG+ +EA ++ +EM + P + TYN +I GLC GK ++
Sbjct: 487 GYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ L E++ +PD + +++++ C
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYC 573
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 175/406 (43%), Gaps = 31/406 (7%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ID+M+G + + ++ Y + G+++ A + + + + +FNTL+
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432
Query: 126 VKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K +L EA ++ S G ++ S +LN ++ LC R+ D A + +G +
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNS--VTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 490
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY L+ G D + EA L M +K I+ Y T++ LC GK +
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEM----KEKEIIPSIITYNTMIGGLCHSGKTDQS 546
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ L ++L GL ++ + I L C +G+ +E A N+ + + P L + + +
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYCREGQ-VEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L EG + + K+ + +KG V Y ++ L K+ +EA +++ E M +
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAE-MEEKKLG 664
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ----------------------VGCVAN 402
P YN +L L DAG A ++ ++ +Q N
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
T+ ++ LC G++ +A +++E + TY L+ GL
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 40/270 (14%)
Query: 20 KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
K + A+K++ E KEK P+ Y +MIG L S + + + ++++
Sbjct: 504 KDGKSVEAMKLWDEMKEKEIIPSI----ITYNTMIGGLCHSGKTDQSIDKLNELLESGLV 559
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
++ + T I Y R GQ+ +A + + + + N LL+ + E L+ A L
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Query: 138 FLRSCYGWEVKSRI---QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
F W K + + N ++ LC+ R + A + EM+ + PD +Y+ ++
Sbjct: 620 F----NTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI-----------------------YRTL 231
L + R+ EA + RI ++G +D I +
Sbjct: 676 ALADAGRMKEAEEFMS----RIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQ 731
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ LC QGK +DAM ++++ +KG+ KS
Sbjct: 732 INELCTQGKYKDAMHMVQESTQKGITLHKS 761
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 193/436 (44%), Gaps = 43/436 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + + EV M C+ + + I AG++NEA+ LF ++
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ NC +++ L+ + + ++++LNL
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGR-------------------KVEALNL---------- 321
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
F EM +GC P+ +Y +L+ GLC + +++EA +L M S+KG +V
Sbjct: 322 -------FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM----SEKGLIPSVV 370
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +G I DA +IL+ ++ P +R + +C + A +L+N+
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L R PSL +Y+++ + ++L M G P Y + L K+G
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+EA + + KG V +Y L+ G C G VA L++M C+ N TY
Sbjct: 490 VEEAGTLFDSVKAKGVKANEV-IYTALIDGYCKVGKIDVAYSLLERMLND-ACLPNSYTY 547
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++GLC++ + EAS ++ +ML P V TY +LI + G A+ M+S
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Query: 467 QAKLPDISVWSSLVAS 482
PD+ +++ + +
Sbjct: 608 LGYQPDVCTYTAFLHA 623
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 223/512 (43%), Gaps = 58/512 (11%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
LTP+++S + P TAL F + P ++HN Y+SM+ IL + + +++
Sbjct: 66 LTPSHVSSLFAFNLDPQTALSFFNWIALR-PGFKHNVHSYSSMLNILIRARLLGVAEKIR 124
Query: 69 DQMKGDSCECKDSVFATAI-RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
M C +D +F + R G+ FK C +NT+L + K
Sbjct: 125 ISMIKSCCSIEDVLFVLEVFRKMNADGE-------FKFKPTLRC------YNTILMSLSK 171
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ ++L ++ I + N +++ C+ A ++ G +PD
Sbjct: 172 FLLIDEMKTVYLE-LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y L+ G C ++ ++ A Y +F + QKG + V Y L+ LC+ G+I +A+++
Sbjct: 231 TYTSLILGHCRNKGVDNA----YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCN-DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ P R + + + + G +E A +L NE +G P++ +Y+ + L
Sbjct: 287 FADMTEDNC-CPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
E ++ E K+L EM KG PS+V Y A + K+GM+D+A E++ + M + P
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-DLMESNSCGPN 403
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKM--------------------------------- 393
R YN L+ GLC A+ L KM
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 394 -SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ G V + TY + +D LC++GR EA + + + + Y LI G C +G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K A LE M++ A LP+ ++ L+ +C
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 222/540 (41%), Gaps = 76/540 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P + T T L + + AL +F E KEK PN Y +I L + N++ E
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH----TYTVLIDGLCKENKMDE 352
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++++ +M + I Y + G +++A + + +C T+++N L+
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ K+ K+ A L L ++ + + N L+ C+ + A + M+ G
Sbjct: 413 GLCKKRKVHKAMAL-LNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD+ +Y + + LC + R+ EA ++F + KG + VIY L+ C GKI
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAG----TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A +LE++L P S + + + + ++ A SL+ + L G P++ +Y+ +
Sbjct: 528 AYSLLERMLNDAC-LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEE--- 357
++ +G KV + M + G+ P + Y A L A F GM++E +VI EE
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646
Query: 358 ----------------------------MVKGTFVPTVRVYNILLKGLCDAG-------- 381
MV P++ + +IL+K L
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706
Query: 382 ---------NSA------------VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
NS +A+ +KM + GC + YG L+ G C+ R
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEH-GCTIDVSIYGALIAGFCQQERLE 765
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA ++ M R P + YN L+ C +G EAV ++ M+ LP + + LV
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 201/473 (42%), Gaps = 47/473 (9%)
Query: 10 TPTYLSQIIK--KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
T TY S I+ + K A ++F +K + N Y ++I L E+ RI E ++
Sbjct: 229 TFTYTSLILGHCRNKGVDNAYEVFLIMPQK--GCQRNEVSYTNLIHGLCEAGRINEALKL 286
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
M D+C + I + +G+ EA++LF + + C ++ L+ + K
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
E+K++ A + + S + + N L+D C+ D A + M+ C P+
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPS-VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ L+ GLC R++++A LL M R ++ Y +L+ C ++ A ++
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLER----KLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L SL+NE G +P +YS L
Sbjct: 462 L---------------------------------SLMNE---NGLVPDQWTYSVFIDTLC 485
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
EGR+ E + D ++ KG + V+Y A + K G +D A ++ E M+ +P
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL-ERMLNDACLPNS 544
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN+L++GLC A + KM +G TY IL+ + +DG F A +V
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKM-LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M+ Y P V TY + S G E + +M + LPD+ ++ L+
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 185/470 (39%), Gaps = 63/470 (13%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN R Y +I L + ++ + ++++M + + I + L
Sbjct: 402 PNTR----TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A L +++ V +++ + + KE ++E A LF S VK+ L+
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF-DSVKAKGVKANEVIYTALI 516
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D C+ + D+A + + M C P+ +Y++L++GLC ++++ EA+ L+ M
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML----T 572
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG--ED 276
G +V Y L+ + G A+++ ++ G + + G E+
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ + +NE G +P L +Y+ + ID Y G L M G PSL +
Sbjct: 633 VDDVIAKMNE---EGILPDLVTYTVL-IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 336 AKLAALFKDGMVDE-----------------------------ALEVIEEEMVKGTFVPT 366
+ L + + E AL++ E+ MV+
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK-MVEHGCTID 747
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V +Y L+ G C A + M K+ G + + Y L+D C+ G + EA R++
Sbjct: 748 VSIYGALIAGFCQQERLEEAQGLVHHM-KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 427 EEMLIRSYWPCVETYNVLI----------------RGLCSIGKQYEAVMW 460
+ M+ P +E+Y +L+ GL S G Y+ V W
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 856
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 173/403 (42%), Gaps = 16/403 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ I L + R+ E + D +K + + ++ I Y + G+++ A SL + +
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ + ++N L++ + KE K++ A L + VK + + +L+ + +
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK-MLTMGVKPTVVTYTILIGEMLKDGA 594
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL VF M G PD +Y + + L E ++ M +++G D+V
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM----NEEGILPDLV 650
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ G A L+ ++ G K P I + + ++ +S I
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCK-PSLYIVSILIKNLSHENRMKETRSEI-- 707
Query: 287 ALIRGGIPSLASYSAMAI-DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
GI S+++ +++ I D++ K+ ++M G + +Y A +A +
Sbjct: 708 -----GIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++EA ++ +G P+ +YN LL C G A AV + M + G + E+
Sbjct: 763 RLEEAQGLVHHMKERG-MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN-GLLPLLES 820
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
Y +LV GL +G +A V +L Y + VLI GL
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E V E+L P + T+N ++ G C IG EA ++ +++ PD ++SL+
Sbjct: 177 EMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLI 236
Query: 481 ASVCCN 486
C N
Sbjct: 237 LGHCRN 242
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 19/479 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ ++IK+ PL LK F E + + H Y ++ L + K
Sbjct: 72 RNLNPSIAFEVIKRFSDPLLGLKFF-EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLK 123
V D M+ D S+ + +YAR G+L+ A + L++ +C S +N LL
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF---LNEVHCYGIKVSPFVYNNLLN 187
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+VK++ ++ A +LF + V + S N+L+ LC+ D A FQ M GC+
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPD-VYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY+ L+ G C +++ LL + KG D++ Y +++ C G ++
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKE---DMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A ++ ++++ G+K P + + ++ A + + L+ G +P + +++++
Sbjct: 304 ASELFDEMVSSGIK-PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
EG + +G K+ +EM+ + P++ Y + AL K+ + EA + +
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH-LKSSEV 421
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
VP +YN ++ G C AG A + +M ++ C + T+ IL+ G C GR +EA
Sbjct: 422 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRMVEAI 480
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+M+ + P T N LI L G EA I QA L +++ S + S
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEA-----SQIKQAALQKLNLGLSSLGS 534
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 8/339 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + +LLM LC+ +D A VF M G PD +L+ +L+ A
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ L + G +Y LL L Q + +A+ + + L + +
Sbjct: 165 NFLN----EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE-MRTK 325
C GE I+ A G P + SY+ + I +G +L E M K
Sbjct: 221 IRGLCRIGE-IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P ++ Y + ++ K G + A E+ +E MV P +N+L+ G GN
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDE-MVSSGIKPNDFTFNVLIDGFGKVGNMRS 338
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ +KM +GC+ + T+ L+DG CR+G + ++ EEM +R+ P V TY VLI
Sbjct: 339 AMVMYEKM-LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC + EA +L + S +P +++ ++ C
Sbjct: 398 NALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 196/407 (48%), Gaps = 17/407 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR- 140
+ + I Y + L+ A +FK + C ++ L+ + E +++ A LF++
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM 314
Query: 141 ---SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
CY +++ +L+ LC R AL++ +EM+ +G P+ +Y +L+ LC
Sbjct: 315 KDDDCY-----PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLC 369
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +L +A LL M +KG +++ Y L+ C +G I+DA+ ++E + + L+
Sbjct: 370 SQCKLEKARELLGQML----EKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P +R + +L ++ A ++N+ L R +P + +Y+++ G +
Sbjct: 426 -PNTRTYN-ELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L M +G P Y + + +L K V+EA ++ + + + +P V +Y L+ G
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS-LEQKDVIPNVVMYTALIDGY 542
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C AG A + L+KM + C+ N T+ L+ GLC DG+ EA+ + E+M+ P
Sbjct: 543 CKAGKVNEAHLMLEKMLSK-NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT 601
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V T +LI L G A ++M+S PD +++ + + C
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 231/503 (45%), Gaps = 35/503 (6%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN--------- 59
++P+++S + P TAL F + P Y+H+ YAS++ +L +
Sbjct: 88 ISPSHVSSLFSLDLDPKTALN-FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 60 --RITEMKEVIDQM----------KGDSCECKDSV----FATAIRTYARAGQLNEAVSLF 103
I V D + K +S E K + + T + + AR G ++E ++
Sbjct: 147 LLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N ++ K +E A+ ++ + + L+ CQ
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKVGNVEEAN-QYVSMIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D A VF+EM +GC + +Y L+ GLC +RR++EA L F ++
Sbjct: 266 RKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDL----FVKMKDDDCYP 321
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ ALC + +A+ +++++ KG+K P + + + +E A+ L
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIK-PNIHTYTVLIDSLCSQCKLEKAREL 380
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + L +G +P++ +Y+A+ G I + V++ M ++ P+ Y + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V +A+ V+ + M++ +P V YN L+ G C +GN A L M+ + G V +
Sbjct: 441 RN-VHKAMGVLNK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDP 497
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++D LC+ R EA + + + + P V Y LI G C GK EA + LE+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK 557
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+S+ LP+ +++L+ +C +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTD 580
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 199/437 (45%), Gaps = 17/437 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L+ + EMK+V +M D + + Y + G + EA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ +L+ + L++A +F L+ C EV + L+ LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEV-----AYTHLIHGLCV 300
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A+ +F +M CYP +Y +L+K LC R +EA +L+ M +KG
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM----EEKGIKP 356
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+I Y L+ +LC Q K++ A ++L ++L KGL + + C G IE A +
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM-IEDALDV 415
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ R P+ +Y+ + I Y + + + VL++M + P +V Y + + +
Sbjct: 416 VELMESRNLRPNTRTYNEL-IKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G D A ++ +G VP Y ++ LC + A + +Q + N
Sbjct: 475 SGNFDSAYRLLSLMNDRG-LVPDPWTYTSMIDSLCKSKRVEEACDLFDSL-EQKDVIPNV 532
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y L+DG C+ G+ EA +LE+ML ++ P T+N LI GLC+ GK EA + E+
Sbjct: 533 VMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK 592
Query: 464 MISQAKLPDISVWSSLV 480
M+ P +S + L+
Sbjct: 593 MVKIDLQPTVSTDTILI 609
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 228/528 (43%), Gaps = 42/528 (7%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P + T T L + + + AL + KE +EK + N Y +I L ++ +
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEALNLVKEMEEK--GIKPNIHTYTVLIDSLCSQCKLEKA 377
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E++ QM + I Y + G + +A+ + + + N T+++N L+K
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K + +A +L +V + + N L+D C+ D A + M+ +G P
Sbjct: 438 YCKRNVHKAMGVL--NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y ++ LC +R+ EA L F + QK ++V+Y L+ C GK+ +A
Sbjct: 496 DPWTYTSMIDSLCKSKRVEEACDL----FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEA 551
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMA 303
+LEK+L K + + C DG+ E +L+ E +++ + P++++ + +
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA--TLLEEKMVKIDLQPTVSTDTILI 609
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L +G + +M + G P Y + ++G + +A +++ + M +
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK-MKENGV 668
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD------------ 411
P + Y+ L+KG D G + A + LK+M GC + T+ L+
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRM-HDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 412 ---GLCRDGRFLEASRV---LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
G+C +E V LE+M+ P ++Y L+ G+C IG A + M
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787
Query: 466 SQAKL-PDISVWSSLVASVCCNTADLN---------VCRKTLEQLSSC 503
+ + P V+++L+ S CC N +C L QL SC
Sbjct: 788 QKEGISPSELVFNALL-SCCCKLEKHNEAAKVVDDMICVGHLPQLESC 834
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 174/418 (41%), Gaps = 58/418 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI L +S R+ E ++ D ++ ++ I Y +AG++NEA + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC+ + +FN L+ + + KL+ A L +++ + + +L+ L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEA-TLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A FQ+M G PD +Y ++ C + RL +A M ++ + G D+
Sbjct: 618 FDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE----DMVAKMKENGVSPDLF 673
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG-----------------LKAPKSRRHRIDLC 269
Y +L+ D G+ A +L+++ G +K K + +C
Sbjct: 674 TYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVC 733
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFW 328
++ + + L+ + + G P+ SY + + + G + +KV D M+ K G
Sbjct: 734 VMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGIS 793
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL-----KGLCDAGNS 383
PS +++ A L+ K +EA +V+++ + G +P + IL+ KG + G S
Sbjct: 794 PSELVFNALLSCCCKLEKHNEAAKVVDDMICVG-HLPQLESCKILICRLYKKGEKERGTS 852
Query: 384 AV-----------------------------AVMYLKKMSKQVGCVANGETYGILVDG 412
A L + ++ GC + +TY +L++G
Sbjct: 853 VFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ T L +S W + Y +LL L + G + +I ++ K +
Sbjct: 101 LDPKTALNFS-HWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI-RLLMIKSCDSVAD 158
Query: 262 RRHRIDLC-PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+DLC N E E LI + Y+ + L G + E +V
Sbjct: 159 TLFVLDLCRKMNKDESFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM P++ Y + K G V+EA + + +V+ P Y L+ G C
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSM-IVEAGLDPDFFTYTSLIMGYCQR 266
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ A K+M + GC N Y L+ GLC + R EA + +M +P V T
Sbjct: 267 KDLDSAFKVFKEMPLK-GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRT 325
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
Y VLI+ LC ++ EA+ ++EM + P+I ++ L+ S+ C+ L R+ L Q+
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL-CSQCKLEKARELLGQM 384
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 224/509 (44%), Gaps = 51/509 (10%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++ P A++ F A E+ Y+H+ Y ++ IL +S +V + C
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQ-DGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCS 59
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
F IR +AGQ A+ + L +F+ FN L+ + K+ + A L
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMK- 194
F + V I + N ++ LC+ + A + +EM +G PD +Y+ L+
Sbjct: 120 F-ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI--- 251
G+C D + EA +L M G D++ Y +++ ALC G++ +A +IL+ +
Sbjct: 179 GICKDGDVEEALEILDGM----KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS 234
Query: 252 --------LRKGL-KA---PKSRRHRIDLCPCNDGEDIEGAKSLIN-------------- 285
L G KA P++ ++C N D+ L+N
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294
Query: 286 -EALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK---------GFWPSLVMY 334
E ++R G IP + +Y+++ L G I E K++ EM + P L Y
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
L L KDG + +A+ +I + + +G +VP V YN L+ GLC A A +M+
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARG-YVPDVVTYNTLIDGLCKANRVREACDLADEMA 413
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+GC N T G +V GLCR GR +A ++ EM + + P V Y LI GLC +
Sbjct: 414 -SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASV 483
+A + L+ M Q D + L+ S+
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSM 501
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 163/358 (45%), Gaps = 49/358 (13%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + S N L+D+L + V++++ GC P+ ++ IL++G C + A
Sbjct: 24 KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L ++ + D+ I+ L+ L G A+++ E +
Sbjct: 84 FLRAL----DEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM---------------- 123
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG- 326
S +N P + +Y+ + L G + + ++L+EM +G
Sbjct: 124 ------------ESSRVN--------PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG 163
Query: 327 -FWPSLVMYEAKL-AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
P +V Y + A + KDG V+EALE+++ + G P V YN ++ LC AG
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP-APDVITYNSIIHALCVAGRVV 222
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A LK MS C + T+ L+DG C+ G A VLEEM + P V TY +L
Sbjct: 223 EAAEILKTMS----CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 278
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ GLC +G+ A LEE++ Q +PD+ ++SLV + C + ++ K ++++S+
Sbjct: 279 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL-CKSGEIEEAHKLVKEMSA 335
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 32 KEAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+EA E + GP Y S+I L + R+ E E++ M SC F T
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTL 243
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCY 143
+ + +AG L A+ + + + + N + ++ L+ + + +++ A L +R Y
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ---------GCYPDRESYHILMK 194
+V + L+D LC+ + A + +EM + P +Y+I++
Sbjct: 304 IPDVIAYTS----LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GL D +++A L+ + R G D+V Y TL+ LC ++++A + +++
Sbjct: 360 GLIKDGSISKAVSLISDLVAR----GYVPDVVTYNTLIDGLCKANRVREACDLADEMASL 415
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + C G ++ A SL+ E + P++ Y+++ L R+ +
Sbjct: 416 GCFPNDVTLGSVVFGLCRVGR-VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
VLD MR +G Y + ++ G V EA+ + +E + +G F+P
Sbjct: 475 ACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARG-FLP 524
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 205/471 (43%), Gaps = 41/471 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ +LS I EMK V +M D T + Y + G + EA +
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q T ++ +L+ + ++AA+ +FL +++ + NL+ C+ RR
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG-FCEARRV 290
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D AL +F +M C+P +Y +++ LC R EA +MF +++K ++
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL----NMFKEMTEKHCQPNVHT 346
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLK------------------------------ 257
Y L+ +LC+ DA +IL +L KGL
Sbjct: 347 YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME 406
Query: 258 ----APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+P +R + + G++I A SL+++ L R P++ +Y+ + EG +
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
K+L M G P Y + L K G+V+EA + E KG V +Y+ L
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV-IYSTL 525
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G C G + L KM GCV N TY L+DG C++ F EA +++ M+ R
Sbjct: 526 IDGYCKVGKVSDGRFLLDKM-LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P +TY +LI L + +A ++M+S PD+ ++++ + + C
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 213/536 (39%), Gaps = 80/536 (14%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKY--PNYRHNGPVYASMIGILSESNRIT 62
WP + T T + + + AL +FKE EK+ PN Y +I L E +
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH----TYTVLICSLCEDSNFD 361
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ K++++ M + I Y + G A+ + + NC +++N L+
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQ 180
+ + A L L +++ + + N+L + QC+ DL A + M+
Sbjct: 422 LGFCRGKNIHKAMSL-LHKMLERKLQPNVVTYNIL--IHGQCKEGDLGSAYKLLSLMNES 478
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G PD +Y + + LC + EA S+F + +KG + VIY TL+ C GK
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEAR----SLFESLKEKGIKANEVIYSTLIDGYCKVGK 534
Query: 241 IQDAMQILEKILRKGL-----------------KAPKSRRHRIDLC------PCND---- 273
+ D +L+K+L G K K R +D+ P D
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTI 594
Query: 274 -------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
++ + A + ++ L G P + Y+A + GR+ + + ++ +M KG
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P ++Y + A + G +D A +++ G P+ Y+ L+K L +A V+
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC-EPSYYTYSCLIKHLSNAKPKEVS 713
Query: 387 VM-----------------------------YLKKMSKQVGCVANGETYGILVDGLCRDG 417
KM++ GC N TYG + GLC+ G
Sbjct: 714 SSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEH-GCAPNANTYGKFITGLCKVG 772
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
A R+ + M + P + YN L+ C +G EA+ WL+ MI LP +
Sbjct: 773 CLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHL 828
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 18/238 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y + I R+ + + +I +M ++ I Y R G ++ A + K +
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM 685
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC-R 165
+ C +++ L+K + E + + S + + C R
Sbjct: 686 HEVGCEPSYYTYSCLIKHLSNAKPKEVS----------SSSELSDLSSGVASNDFSNCWR 735
Query: 166 RSD--LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D L +F +M GC P+ +Y + GLC L A + +F + +KG
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVA----HRLFDHMKEKGQSP 791
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ IY +LL C G +A++ L+ I+ + P ++ LC D + E AK
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLD-IMIENRHLPHLDSCKLLLCGLYDEGNDEKAK 848
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 19/479 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P+ ++IK+ PL LK F E + + H Y ++ L + K
Sbjct: 72 RNLNPSIAFEVIKRFSDPLLGLKFF-EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLK 123
V D M+ D S+ + +YAR G+L+ A + L++ +C S +N LL
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF---LNEVHCYGIKVSPFVYNNLLN 187
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+VK++ ++ A +LF + V + S N+L+ LC+ D A FQ M GC+
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPD-VYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY+ L+ G C +++ LL + KG D++ Y +++ C G ++
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKE---DMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A ++ ++++ G+K P + + ++ A + + L+ G +P + +++++
Sbjct: 304 ASELFDEMVSSGIK-PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
EG + +G K+ +EM+ + P++ Y + AL K+ + EA + +
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH-LKSSEV 421
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
VP +YN ++ G C AG A + +M ++ C + T+ IL+ G C GR +EA
Sbjct: 422 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRMVEAI 480
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+M+ + P T N LI L G EA I QA L +++ S + S
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEA-----SQIKQAALQKLNLGLSSLGS 534
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 8/339 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + +LLM LC+ +D A VF M G PD +L+ +L+ A
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ L + G +Y LL L Q + +A+ + + L + +
Sbjct: 165 NFLN----EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE-MRTK 325
C GE I+ A G P + SY+ + I +G +L E M K
Sbjct: 221 IRGLCRIGE-IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P ++ Y + ++ K G + A E+ +E MV P +N+L+ G GN
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDE-MVSSGIKPNDFTFNVLIDGFGKVGNMRS 338
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ +KM +GC+ + T+ L+DG CR+G + ++ EEM +R+ P V TY VLI
Sbjct: 339 AMVMYEKM-LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC + EA +L + S +P +++ ++ C
Sbjct: 398 NALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 218/485 (44%), Gaps = 56/485 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I + + ++ E E+++ M C ++T I+ +++EA LF ++ +
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWE-VKSRIQSLNLLMDVLCQC 164
C ++ TL+K + + K+ A +L S YG + ++ + + ++L+D+LC+
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ A + + M +GC D +Y L+KGLC + R++EAT L SM + G D
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM----QKLGCRPD 416
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKIL----RKGLKA-PKSRRHRIDL-CPCNDGEDIE 278
+ Y TL+ LC G I A+Q+ +++L R G+K P + I + C D + E
Sbjct: 417 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 476
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ L E +G +P + SY+ + G+ + + +EM G P + +
Sbjct: 477 -ARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFV---------------------------------- 364
L K G V EA +++E + +G +
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-----VGCVANGETYGILVDGLCRDGRF 419
P V L+KGLC +GN +A+ K M + C N +Y I++DGLC+ GR
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 655
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA + +EM P V +Y LI G C GK +A EM+ PD++ +S L
Sbjct: 656 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715
Query: 480 VASVC 484
+ +C
Sbjct: 716 IDMLC 720
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 218/491 (44%), Gaps = 50/491 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + + +I IL + ++ E E+++ M C ++T I+ +++EA
Sbjct: 51 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 110
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILFLRSC--YGWEVKSRIQSLNL 156
LF ++ + C ++ TL+K + + + A H L YG + K + S ++
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 170
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA----------- 205
++D LC+ RR D A +F+EM QG PD SY L+ G C+ + +A
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 206 -------THLLYSMFWR-------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +L MF + + +G DIV Y TL+ LC + +I +A
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGIPSL---ASY 299
Q+ + + G + + C G+ I A L E L + GI + +
Sbjct: 291 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGK-INIALHLHQEMLNDTSQYGIKCIRPDVTT 349
Query: 300 SAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
S+M ID L EG+++E +++L+ M +G +V Y + L + + EA + M
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF-MSM 408
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-----CVANGETYGILVDGL 413
K P Y L+KGLC GN +A+ ++M G C +Y I++DGL
Sbjct: 409 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 468
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+D R EA + EEM + P V +Y LI G C GK +A EM+ PD+
Sbjct: 469 CKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528
Query: 474 SVWSSLVASVC 484
+ S L+ +C
Sbjct: 529 TTSSVLIDMLC 539
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 217/464 (46%), Gaps = 27/464 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE----CKDSVFATA---IRTYARAG 94
R + Y +++ L ++ +I + +M D+ + C T+ I + G
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
++ EA L + + Q C+ +++TL+K + E ++ A LF+ S + +
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM-SMQKLGCRPDAITY 420
Query: 155 NLLMDVLCQCRRSDLALHVFQEM-DFQG-----CYPDRESYHILMKGLCNDRRLNEATHL 208
LM LCQ ++AL + QEM + G C P SY I++ GLC DRR +EA L
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
F + +G D++ Y TL+ C GK + A + ++L G++ + +
Sbjct: 481 ----FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 536
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C G+ IE A L+ + RG I + + + + L + RI + ++ +M+ G
Sbjct: 537 MLCKKGKVIE-ANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV------PTVRVYNILLKGLCDAGN 382
P++V + L + G + ALE + + M+ T P Y+I++ GLC G
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALE-LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A K+M K +G + + +Y L+ G CR G++ +A + EM+ P V T++
Sbjct: 655 EDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
VLI LC GK EA LE MI + +P+ +++LV +C N
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 215/481 (44%), Gaps = 37/481 (7%)
Query: 27 ALKIFKEAKEKYPNY-----RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
AL + +E Y R + + +I IL + ++ E E+++ M C
Sbjct: 324 ALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 383
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILF 138
++T I+ +++EA LF ++ + C ++ TL+K + + + A H
Sbjct: 384 TYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM 443
Query: 139 LRSC--YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L YG + K + S ++++D LC+ RR D A +F+EM QG PD SY L+ G
Sbjct: 444 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + +A L M G D+ L+ LC +GK+ +A ++LE ++++G
Sbjct: 504 CLSGKWEKAKCLFNEML----DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 559
Query: 257 KAPKSRRHRIDLCPCND-------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+D+ C I A L + G +P++ + + + L
Sbjct: 560 --------ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611
Query: 310 GRI---VEGDK-VLDEMRTKGF--WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G I +E K +L + G P+ + Y + L K G DEA E+ +E G
Sbjct: 612 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV- 670
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P V Y L+ G C +G A +M +G + T+ +L+D LC++G+ +EA+
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMV-DIGVQPDVTTFSVLIDMLCKEGKVIEAN 729
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+LE M+ R P TY L++GLC + EA +M LPD+ + +L+ +
Sbjct: 730 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789
Query: 484 C 484
C
Sbjct: 790 C 790
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 177/353 (50%), Gaps = 20/353 (5%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ ++ + + ++L+D+LC+ + A + + M +GC D +Y L+KGLC + R++E
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL----RKGLKA-P 259
AT L SM + G D + Y TL+ LC G I A+Q+ +++L R G+K P
Sbjct: 108 ATWLFMSM----QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163
Query: 260 KSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I + C D + E A+ L E +G +P + SY+++ + G+ + +
Sbjct: 164 TLISYSIIIDGLCKDRREDE-ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+EM G P + + K+G V EA E++E + +G + V Y+ L+KGLC
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV-TYSTLIKGLC 281
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML-------I 431
+ A M K++GC + YG L+ GLC+ G+ A + +EML I
Sbjct: 282 MKHRISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P V T ++LI LC GK EA LE MI + + DI +S+L+ +C
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 393
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 196/448 (43%), Gaps = 18/448 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + R E +E+ ++MK + T I + +G+ +A LF +
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH----ILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + L+ + K+ K+ A+ ++ R C + + L+ LC
Sbjct: 521 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI-----LDVVTCTTLVKGLCM 575
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG- 222
R A +F +M GC P+ + LMKGLC + A L +M S G
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635
Query: 223 -EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y ++ LC G+ +A ++ +++ G+ + C G+ + AK
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK-WKDAK 694
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L NE + G P + ++S + L EG+++E +++L+ M +G P+ V Y + L
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ + EA ++ + M K +P V Y L+KGLC GN A+ KKM G
Sbjct: 755 CMNDRISEATQLFMK-MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 402 NGE-----TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+Y I++DGLC+ GR EA + +EM P V +Y LI G C GK +
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A EM+ Q + +S ++ C
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFC 901
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 187/419 (44%), Gaps = 53/419 (12%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I +L + ++ E ++++ + C T ++ ++++A LF + +
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C+ + TL+K + + ++ A ++L S YG K S ++++D LC+C
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A +F+EM G PD SY L+ G C + +A +L F + G D+
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL----FNEMVDIGVQPDV 709
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ L+ LC +GK+ +A ++LE +++
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQ-------------------------------- 737
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
RG IP+ +Y+ + L RI E ++ +M+ G P +V Y + L + G
Sbjct: 738 ----RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793
Query: 346 MVDEALEVIEEEMVKGT------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ ALE + ++M+ T F P V Y+I++ GLC G A K+M K +G
Sbjct: 794 NIKTALE-LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM-KALGV 851
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N +Y L+ G CR G+ +A + EM+ + TY+V+I G C G+ +A+
Sbjct: 852 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 23/331 (6%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT------ 230
M G +PD +++IL+ LCN +R+NE + I ++G DIV Y
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEG----LAAMAGIMRRGYIPDIVTYSIRPDVTT 56
Query: 231 ---LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
L+ LC +GK+ +A ++LE ++++G + C + I A L
Sbjct: 57 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCME-HRISEATWLFMSM 115
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFW-----PSLVMYEAKLAAL 341
G P +Y + L G I ++ EM G + P+L+ Y + L
Sbjct: 116 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 175
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
KD DEA E+ +E +G +P V Y L+ G C +G A +M VG
Sbjct: 176 CKDRREDEARELFKEMKAQG-MMPDVISYTSLIHGFCHSGKWEKAKCLFNEML-DVGIQP 233
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ T G+L+D C++G+ +EA+ +LE M+ R + TY+ LI+GLC + EA
Sbjct: 234 DVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF 293
Query: 462 EEMISQAKLPDISVWSSLVASVCCNTADLNV 492
M PD + +L+ + C T +N+
Sbjct: 294 MSMKKLGCRPDAIAYGTLMKGL-CQTGKINI 323
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 228/477 (47%), Gaps = 15/477 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T T L + + + A+++F E EK + Y +I L ++ +
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEK--GLFGDAKTYGILINGLCKARKTGLAI 132
Query: 66 EVIDQMKGDSCECKDSVFATA--IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++ ++MKG+ CK VF I + + G EA+ +F + + +++L+
Sbjct: 133 KLHEKMKGN---CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + +L+ A + F + G + + + + N L+ L + M +G
Sbjct: 190 GLCRFGRLKEA-LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD ++ IL+ GLC + ++ EA +L M KG DI+ Y TL+ LC G+++D
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELM----HHKGKEPDILTYNTLMNGLCLVGQLED 304
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A ++ E + +G+K + + C D + I+ A L E +G PS +Y+ +
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKD-QKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L GR+ K+ EM+T G + L Y L L K+G ++EA+++ + + K
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS-IKKTEH 422
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + V++ILL G+C AG A ++SK G + Y IL++GLC G EA
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN-GLEPDTIAYNILINGLCNKGMLSEAV 481
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++L +M + P T+NV+I+ L + +EA+ LEEM ++ PD +V S L+
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 182/404 (45%), Gaps = 12/404 (2%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+AV LF +++ +++ L+ + K K A + L K + + ++
Sbjct: 95 DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA--IKLHEKMKGNCKGDVFTYGMI 152
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+D LC+ + AL +F EM G PD Y LM GLC RL EA F +
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF----FKEME 208
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGED 276
+G D+ Y +L+ L G ++ L ++ +G +P + I + C +G+
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF-SPDAFTFTILIDGLCKEGKV 267
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A+ ++ +G P + +Y+ + L G++ + K+ + + +G ++ Y
Sbjct: 268 GE-AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ KD +DEA + EE KG P+ YN L+ LC +G A +M +
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QT 384
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G TY +L+DGLC++G EA + + + + P +E +++L+ G+C GK E
Sbjct: 385 CGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A +E+ PD ++ L+ + CN L+ K L Q+
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGL-CNKGMLSEAVKLLWQM 487
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDG 274
++G D V TL+ + + I DA+Q+ +++ KGL ++ + I LC
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFG-DAKTYGILINGLCKARK- 127
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
G ++E + + +Y + L +G E + EM G P +V+Y
Sbjct: 128 ---TGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY 184
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + L + G + EALE +E +G V YN L+ GL AG +L M
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + T+ IL+DGLC++G+ EA ++LE M + P + TYN L+ GLC +G+
Sbjct: 244 DR-GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQL 302
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A E + + ++ ++ L+ C
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYC 332
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 206/459 (44%), Gaps = 43/459 (9%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S N+L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD ++ L+ GLC + R++EA +L + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----------------------- 279
+A+ +L++++ GL+ + I C G+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 280 ------------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y A + A K+G EA E+ +E + +G +P Y+ ++ G C N A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQ-NRLDAA 379
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ + GC N T+ L+DG C R + +L EM TYN LI G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G A+ L+EMIS PDI +L+ +C N
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 210/452 (46%), Gaps = 24/452 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K+ +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKS 282
V Y L+ A +GK +A ++ +++L +G+ P + + ID C N ++ A+
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPNTITYSSMIDGFCKQNR---LDAAEH 381
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +G P+L +++ + RI +G ++L EM G Y + +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
G ++ AL++++E M+ P + + LL GLCD G A+ K M K
Sbjct: 442 LVGDLNAALDLLQE-MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 398 -----GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ P++ +++L+ C
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 199/441 (45%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + T ++++++ K+++L+AA H+ +L +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + + EM G D +Y+ L+ G LN
Sbjct: 390 G--CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G DIV TLL LCD GK++DA+++ K+++K K
Sbjct: 448 AALDLLQEMI----SSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKK------ 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
D++ + G P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 497 ------------DLDASHPF------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V + L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VAN TY L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 657 MLTGLWSKEELKRAVAMLEKL 677
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/513 (20%), Positives = 202/513 (39%), Gaps = 55/513 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + AL +F + E R N + +++ L RI E
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKE 124
++D+M D + + T + + G A++L + + + + + ++ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 125 MVKESKLEAAHILF----------------------------------LRSCYGWEVKSR 150
+ K+ + A LF L+ ++
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L++ + + A ++ EM +G P+ +Y ++ G C RL+ A H
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH--- 381
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
MF+ ++ KG +++ + TL+ C +I D M++L ++ GL A + + +
Sbjct: 382 -MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT------ 324
G D+ A L+ E + G P + + + L + G++ + ++ M+
Sbjct: 441 YLVG-DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 325 -----KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
G P + Y ++ L +G EA E+ EE +G VP Y+ ++ GLC
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCK 558
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A M + N T+ L++G C+ GR + + EM R
Sbjct: 559 QSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
TY LI G +G A+ +EMIS PD
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 210/452 (46%), Gaps = 24/452 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K+ +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKS 282
V Y L+ A +GK +A ++ +++L +G+ P + + ID C N ++ A+
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPNTITYSSMIDGFCKQNR---LDAAEH 381
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +G P+L +++ + RI +G ++L EM G Y + +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
G ++ AL++++E M+ P + + LL GLCD G A+ K M K
Sbjct: 442 LVGDLNAALDLLQE-MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 398 -----GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ P++ +++L+ C
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 204/459 (44%), Gaps = 43/459 (9%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S N+L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD ++ L+ GLC + R++EA + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----------------------- 279
+A+ +L++++ GL+ + I C G+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 280 ------------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y A + A K+G EA E+ +E + +G +P Y+ ++ G C N A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQ-NRLDAA 379
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ + GC N T+ L+DG C R + +L EM TYN LI G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G A+ L+EMIS PDI +L+ +C N
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 199/441 (45%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + T ++++++ K+++L+AA H+ +L +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + + EM G D +Y+ L+ G LN
Sbjct: 390 G--CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G DIV TLL LCD GK++DA+++ K+++K K
Sbjct: 448 AALDLLQEMI----SSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKK------ 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
D++ + G P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 497 ------------DLDASHPF------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V + L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VAN TY L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 657 MLTGLWSKEELKRAVAMLEKL 677
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/513 (20%), Positives = 201/513 (39%), Gaps = 55/513 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + AL F + E R N + +++ L RI E
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALDFFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKE 124
++D+M D + + T + + G A++L + + + + + ++ ++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 125 MVKESKLEAAHILF----------------------------------LRSCYGWEVKSR 150
+ K+ + A LF L+ ++
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L++ + + A ++ EM +G P+ +Y ++ G C RL+ A H
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH--- 381
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
MF+ ++ KG +++ + TL+ C +I D M++L ++ GL A + + +
Sbjct: 382 -MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT------ 324
G D+ A L+ E + G P + + + L + G++ + ++ M+
Sbjct: 441 YLVG-DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 325 -----KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
G P + Y ++ L +G EA E+ EE +G VP Y+ ++ GLC
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCK 558
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A M + N T+ L++G C+ GR + + EM R
Sbjct: 559 QSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
TY LI G +G A+ +EMIS PD
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R+ + + N+A++LF ++++ + + F+ LL + K +K EA LF R
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLF-RHLEMLG 109
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S L+D C+C R LAL +M G P ++ L+ G C+ R EA
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+ +I G ++VIY T++ +LC++G++ A+ +L+ + + G++ + +
Sbjct: 170 ----SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN-EGRIVEGDKVLDEMRT 324
+ G G + I ++R GI P + ++SA+ ID+Y EG+++E K +EM
Sbjct: 226 ITRLFHSGT--WGVSARILSDMMRMGISPDVITFSAL-IDVYGKEGQLLEAKKQYNEMIQ 282
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P++V Y + + L G++DEA +V+ + KG F P YN L+ G C A
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVD 341
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ L MS+ G + TY L G C+ G+F A +VL M+ P + T+N+L
Sbjct: 342 DGMKILCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC GK +A++ LE++ + I ++ ++ +C
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 11/316 (3%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
L+L + F G R Y ++ + + N+A ++F +++ IV +
Sbjct: 31 LSLRICNSRAFSG----RSDYRERLRSGLHSIKFNDAL----TLFCDMAESHPLPSIVDF 82
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
LL A+ K + + + + G+ + C C + A S + + +
Sbjct: 83 SRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR-LSLALSCLGKMM 141
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G PS+ ++ ++ + R E ++D++ G+ P++V+Y + +L + G V+
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
AL+V++ M K P V YN L+ L +G V+ L M + +G + T+
Sbjct: 202 TALDVLKH-MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR-MGISPDVITFSA 259
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+D ++G+ LEA + EM+ RS P + TYN LI GLC G EA L ++S+
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 469 KLPDISVWSSLVASVC 484
P+ +++L+ C
Sbjct: 320 FFPNAVTYNTLINGYC 335
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 134/333 (40%), Gaps = 42/333 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S++ NR E ++DQ+ G E ++ T I + GQ+N A+ + K++
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++N+L+ + S L + + + + L+DV + +
Sbjct: 212 KMGIRPDVVTYNSLITRLF-HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM + P+ +Y+ L+ GLC L+EA +L + KG + V
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV----SKGFFPNAVT 326
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ C ++ D M+IL + R G+ DG+
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGV----------------DGDTF---------- 360
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+Y+ + G+ +KVL M + G P + + L L G +
Sbjct: 361 ----------TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+AL V E++ K V + YNI++KGLC A
Sbjct: 411 GKAL-VRLEDLQKSKTVVGIITYNIIIKGLCKA 442
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 191/397 (48%), Gaps = 8/397 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+T R +L++A++LF+ + + FN LL +VK K + I + +
Sbjct: 58 KTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVV-ISLGKKMEVLGI 116
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ + + N++++ C C + LAL V +M G PDR + L+ G C R+++A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M + G DIV Y ++ +LC ++ DA+ ++I RKG++ +
Sbjct: 177 LVDKMV----EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
CN G + A+ L+ + + R P++ +YSA+ G+++E ++ +EM
Sbjct: 233 NGLCNSGRWNDAAR-LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSI 291
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + L +DEA ++ + + KG F P V YN L+ G C A +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF-PDVVSYNTLINGFCKAKRVEDGM 350
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+KMS Q G V N TY L+ G + G +A +M P + TYN+L+ G
Sbjct: 351 KLFRKMS-QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G +A++ E+M DI +++++ +C
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMC 446
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 169/356 (47%), Gaps = 18/356 (5%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N ++D LC+ RR + AL F+E+ +G P+ +Y L+ GLCN R N+A LL
Sbjct: 190 IVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR 249
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DL 268
M R +++ Y LL A GK+ +A +I E+++R + + L
Sbjct: 250 DMIKR----KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C + I+ A + + + +G P + SY+ + R+ +G K+ +M +G
Sbjct: 306 CL---HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
+ V Y + F+ G VD+A E +M P + YNILL GLCD G A++
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFF-SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ M K + + TY ++ G+C+ G+ +A + + ++ P + TY ++ GL
Sbjct: 422 IFEDMQKSEMDL-DIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
C+ G Q+E +M + + + S+ +C D+ + + ++++ SC
Sbjct: 481 CTKGLQHEVEALYTKMKQEGLMKNDSM-------LCLGDGDITISAELIKKMLSCG 529
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 14/291 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K L A +IF+E + + Y+S+I L +RI E
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKEIFEEMVRM--SIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C + T I + +A ++ + + LF+ +SQ VN T ++NTL++
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ ++ A F + V I + N+L+ LC + AL +F++M D
Sbjct: 376 FQVGDVDKAQ-EFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLD 434
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +++G+C ++ +A + +F +S KG DIV Y T++ LC +G +
Sbjct: 435 IVTYTTVIQGMCKTGKVEDA----WGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ K+ ++GL S LC DG DI + LI + L G PSL
Sbjct: 491 ALYTKMKQEGLMKNDSM-----LC-LGDG-DITISAELIKKMLSCGYAPSL 534
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 211/460 (45%), Gaps = 47/460 (10%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I +Q++ AL+IF A + +P + HN Y S++ LS + +
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 65 KEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++ ++ +C +++F +R Y AG+ ++ +F + F +S NTLL
Sbjct: 103 ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ------------------- 163
+++ + + H +F S + + I + NLL+ LC+
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 164 --------------CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
R D+ A V +EM +G YPD +Y +LM G C R +EA
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 208 LLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++ M +K E + V Y ++ ALC + K +A + +++L + S ++
Sbjct: 283 VMDDM-----EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D ++ A L + L +P A S + L EGR+ E K+ DE KG
Sbjct: 338 IDALCED-HKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KG 395
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PSL+ Y +A + + G + EA + ++M + P YN+L++GL GN
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGR-LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V L++M ++GC N T+ IL +GL + G+ +A +++
Sbjct: 455 VRVLEEML-EIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 8/331 (2%)
Query: 157 LMDVLCQCRRSDLALHVF--QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
L+ ++ Q + DLAL +F G + ++YH ++ L R + L+ +
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN 111
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCND 273
GE++ I + L G+ + +M+I +I G+K + +S +++ N
Sbjct: 112 SYPPIKCGENLFIDLLRNYGLA--GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
D+ A N G P++ + + + L + I KVLDE+ + G P+LV
Sbjct: 170 RFDLVHA-MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L G ++ A V+EE + +G + P Y +L+ G C G + A + M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWY-PDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K N TYG+++ LC++ + EA + +EML RS+ P +I LC K
Sbjct: 288 EKN-EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA +M+ +PD ++ S+L+ +C
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 226/528 (42%), Gaps = 48/528 (9%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN--RITEMKEVIDQM 71
L +++K + P TAL +P Y P+ ++ L+ S+ R+ + ++ ++
Sbjct: 17 LLELMKSEPDPATALAHLDLLVSTWPAYTPPQPLLFHLLRRLATSSPSRLPRLLGILPRL 76
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESK 130
+ +S + ++RA + A++ F+ L F C +S N LL V+ +
Sbjct: 77 RHRP-RFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARR 135
Query: 131 LEAAHILFL---RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
A F +G + +Q+ N+++ LC D A+ +F + +G PDR
Sbjct: 136 FSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRI 195
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y LM G + RL+ A +LL M Q D V Y LL G+ + AM++
Sbjct: 196 TYSTLMSGFVKNNRLDNALYLLDEMPSYEVQP----DAVCYNALLGGCFRNGEFEKAMRV 251
Query: 248 LEKILRKGLKAPK----------------------------SRRHRIDLCPCND------ 273
E+++R +P + H+ D+
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311
Query: 274 -GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D++ A + +E + G +P + Y+++ + GR+ E K D M G ++
Sbjct: 312 RSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVT 370
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L LF GMVD+A ++ E + P + ++ ++ GLC+ G + ++ L++
Sbjct: 371 SYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE 430
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
++ G + +Y ++ GLC+DGR +A ++ E++ + S+ P YN LI G C
Sbjct: 431 -ARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQAS 489
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
K +A+ +M P +++L+ +C L R T E L
Sbjct: 490 KFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 11/405 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++T + + + +L+ A+ L + + +N LL + + E A ++ +
Sbjct: 196 TYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQL 255
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N+++D LC+ A V++ M PD +Y ++ GLC
Sbjct: 256 VRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTD 315
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++ A + M + G D+VIY +LL C G++ +A + + + G++ S
Sbjct: 316 VDSAARVYSEMI----KTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTS 371
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I L DG ++ A L E L + P + ++S M L +G + ++L
Sbjct: 372 --YNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+E RT G Y + ++ L KDG +D+A++ + E++ +F P +YN L+ G C
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDGRLDDAVK-LYEKISMDSFKPNSHIYNALINGFCQ 487
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + A+ +M++ C TY L+ GLC+ ++LEASR EML + V
Sbjct: 488 ASKFSDAIRVYSQMAEN-DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVN 546
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY LIRGLC K A+ +++ + D+ + + L+ +C
Sbjct: 547 TYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLC 591
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 199/471 (42%), Gaps = 61/471 (12%)
Query: 25 LTALKIFKEAKEKYP-----NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
L L +FKEA + + N++ + Y +MI L S + V +M
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
++ + ++ + AG++ EA + ++S N T S+N +LK + ++ A L
Sbjct: 335 VVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVT-SYNIMLKGLFDGGMVDKATDL-- 391
Query: 140 RSCYGWEVKSRIQSLN-------LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
WE+ + SL+ ++ LC+ ++ +L + +E G D SY +
Sbjct: 392 -----WELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ GLC D RL++A L + +IS + IY L+ C K DA+++ ++
Sbjct: 447 ISGLCKDGRLDDAVKL----YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMA 502
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
ND P+ +Y+ + L +
Sbjct: 503 E------------------NDCS------------------PTTITYNTLIHGLCKAEKY 526
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+E + EM KG + Y + + L +D +D AL + + + KG V ++NI
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVV-MHNI 585
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ GLC AG A L +M ++ C N TY L+DG G F +A+ + +L
Sbjct: 586 LIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILEN 645
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P + +YN I+GLCS + E V L EM++ +P W+ LV +V
Sbjct: 646 GLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 141/302 (46%), Gaps = 7/302 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+++MI L E + +++++ + E + +++ I + G+L++AV L++ +
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S + + +N L+ + SK A ++ + + + N L+ LC+ +
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN-DCSPTTITYNTLIHGLCKAEK 525
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSGEDI 225
A +EM +GC D +Y L++GLC D++++ A L W +I KG D+
Sbjct: 526 YLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL-----WNQILDKGLQTDV 580
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V++ L+ LC GK+ +A Q+L ++ K P + + + + A SL
Sbjct: 581 VMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWM 640
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
L G +P + SY+ L + R EG ++L+EM G P+ + + + A+ K G
Sbjct: 641 AILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700
Query: 346 MV 347
+
Sbjct: 701 PI 702
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 225/475 (47%), Gaps = 31/475 (6%)
Query: 9 LTPTYLSQIIKKQKSPLT-ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P + +++ + ++ LT + + +PN++H ++MI IL S R+++ +
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ +M S + + + T++ G N++V F+ L++ V+
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGS-NDSV-----------------FDLLIRTYVQ 177
Query: 128 ESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KL AH F LRS G+ V I + N L+ L + +LA V+QE+ G +
Sbjct: 178 ARKLREAHEAFTLLRS-KGFTVS--IDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +I++ LC D ++ + L ++ +KG DIV Y TL+ A +G +++A
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFL----SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+++ + KG + + C G+ E AK + E L G P +Y ++ ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGK-YERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+G +VE +KV +MR++ P LV + + ++ + G +D+AL G +P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG-LIP 408
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+Y IL++G C G +VA M L+ Q GC + TY ++ GLC+ EA ++
Sbjct: 409 DNVIYTILIQGYCRKGMISVA-MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EM R+ +P T +LI G C +G A+ ++M + D+ +++L+
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 201/438 (45%), Gaps = 30/438 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + + KEV +M + + + + + G + E +F ++
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--C 164
+ V F++++ + L+ A +++ S ++ + N++ +L Q C
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVK----EAGLIPDNVIYTILIQGYC 421
Query: 165 RRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R+ +A+++ EM QGC D +Y+ ++ GLC + L EA L F ++++
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL----FNEMTERALF 477
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DG----E 275
D L+ C G +Q+AM++ +K+ K +R R+D+ N DG
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKM--------KEKRIRLDVVTYNTLLDGFGKVG 529
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
DI+ AK + + + + +P+ SYS + L ++G + E +V DEM +K P++++
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + + G + E E+M+ FVP YN L+ G N + A +KKM +
Sbjct: 590 SMIKGYCRSGNASDG-ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 396 -QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q G V + TY ++ G CR + EA VL +M+ R P TY +I G S
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 455 YEAVMWLEEMISQAKLPD 472
EA +EM+ + PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 195/442 (44%), Gaps = 22/442 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I S + E E+++ M G + T I + G+ A +F +
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ +LL E K+ + +F +RS +V + + +M + +
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS---RDVVPDLVCFSSMMSLFTRS 388
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D AL F + G PD Y IL++G C ++ A +L M Q+G D
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML----QQGCAMD 444
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE----DIEGA 280
+V Y T+L LC + + +A ++ ++ + L P S I + DG +++ A
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILI----DGHCKLGNLQNA 499
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L + + + +Y+ + G I ++ +M +K P+ + Y + A
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L G + EA V +E M+ PTV + N ++KG C +GN++ +L+KM + G V
Sbjct: 560 LCSKGHLAEAFRVWDE-MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFV 617
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIR--SYWPCVETYNVLIRGLCSIGKQYEAV 458
+ +Y L+ G R+ +A ++++M P V TYN ++ G C + EA
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
+ L +MI + PD S ++ ++
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMI 699
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 213/453 (47%), Gaps = 26/453 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K+ +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKS 282
V Y L+ A +GK +A ++ +++L +G+ P + + ID C N ++ A+
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPNTITYSSMIDGFCKQNR---LDAAEH 381
Query: 283 LINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ +G P+L +++ + ID Y RI +G ++L EM G Y +
Sbjct: 382 MFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV---- 397
+ G ++ AL++++E M+ P + + LL GLCD G A+ K M K
Sbjct: 441 YLVGDLNAALDLLQE-MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 398 ------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ P++ +++L+ C
Sbjct: 560 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 206/459 (44%), Gaps = 43/459 (9%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S +L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD +++ L+ GLC + R++EA +L + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----------------------- 279
+A+ +L++++ GL+ + I C G+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 280 ------------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y A + A K+G EA E+ +E + +G +P Y+ ++ G C N A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQ-NRLDAA 379
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ + GC N T+ L+DG C R + +L EM TYN LI G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G A+ L+EMIS PDI +L+ +C N
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 199/441 (45%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + T ++++++ K+++L+AA H+ +L +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + + EM G D +Y+ L+ G LN
Sbjct: 390 G--CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G DIV TLL LCD GK++DA+++ K+++K K
Sbjct: 448 AALDLLQEMI----SSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKK------ 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
D++ + G P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 497 ------------DLDASHPF------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V + L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VAN TY L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 657 MLTGLWSKEELKRAVAMLEKL 677
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 193/496 (38%), Gaps = 63/496 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F + E R N + +++ L RI E ++D+M D + + T
Sbjct: 168 ALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 87 IRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHILF------- 138
+ + G A++L + + + + + ++ ++ + K+ + A LF
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 139 ---------------------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
L+ ++ + + N L++ + + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
++ EM +G P+ +Y ++ G C RL+ A H MF+ ++ KG +++ + TL
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH----MFYLMATKGCSPNLITFNTL 401
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRR----HRIDLCPCNDGEDIEGAKSLINEA 287
+ C +I D M++L ++ GL A + H L D+ A L+ E
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG-----DLNAALDLLQEM 456
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT-----------KGFWPSLVMYEA 336
+ G P + + + L + G++ + ++ M+ G P + Y
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
++ L +G EA E+ EE +G VP Y+ ++ GLC A M +
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
N T+ L++G C+ GR + + EM R TY LI G +G
Sbjct: 576 -SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNING 634
Query: 457 AVMWLEEMISQAKLPD 472
A+ +EMIS PD
Sbjct: 635 ALDIFQEMISSGVYPD 650
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 222/500 (44%), Gaps = 48/500 (9%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + ++ Q+ AL+ F A ++ YRH+ VY M+ ILS++ K
Sbjct: 209 RSLNPLQVCAVLLSQEDERNALRFFYWA-DRLWRYRHDSSVYLVMLEILSKTKLCQGAKR 267
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ M + F + +Y+RAG+L +A+ + + + NT + +V
Sbjct: 268 ILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILV 327
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
++L+ A + F + + + N L+ C + D A+ + +M +GC PD+
Sbjct: 328 MGNELKKA-LRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDK 386
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDA 244
SY+ +M LC D+RLNE L+ M Q S D V Y +L+ L G +A
Sbjct: 387 VSYYTVMGLLCRDKRLNEIRELIKKM-----QTDSKLLPDHVTYNSLIQMLSKHGHGDEA 441
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++IL++ + K K YSA+
Sbjct: 442 LEILQEAEKLRFKVDK------------------------------------VEYSAIVH 465
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG+I + +++ EM +KG P +V Y + L + G +D+A +++++ M K
Sbjct: 466 AYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQ-MYKHHCK 524
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P Y L GLC G S A + MS++ N TY ++V GL R+G+ EA
Sbjct: 525 PNAVTYTTFLNGLCRNGKSLEARKMMN-MSEEEWWTPNAITYSVVVHGLRREGKLNEACD 583
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V+ EM+ + ++P N+L+ LC GK EA L+E +++ ++ +++++
Sbjct: 584 VVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGF- 642
Query: 485 CNTADLNVCRKTLEQLSSCS 504
C DL L+ + C+
Sbjct: 643 CQKDDLEAALSLLDDMYLCN 662
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 197/456 (43%), Gaps = 66/456 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G+L R+ E++E+I +M+ DS D V + + I+ ++ G +EA+ + +
Sbjct: 389 YYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEA 448
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ ++ ++ KE K++ A L F + C + + ++D C
Sbjct: 449 EKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGC-----DPDVVTYTSVLDGFC 503
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND----------------------- 199
+ + D A + Q+M C P+ +Y + GLC +
Sbjct: 504 RIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAI 563
Query: 200 ---------RR---LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
RR LNEA ++ M KG + V L+ +LC GK ++A Q+
Sbjct: 564 TYSVVVHGLRREGKLNEACDVVREMIG----KGFFPNPVEINLLVHSLCRDGKPREANQL 619
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L++ + KG + C +D+E A SL+++ + P +Y+A+ L
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQK-DDLEAALSLLDDMYLCNKHPDTVTYTALIDALA 678
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
RI E ++ +M +G PS V Y + + + G V++ L+++++ ++K F
Sbjct: 679 KTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTA- 737
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV------ANGETYGILVDGLCRDGRFLE 421
YN++++ LC G YL++ + +G V + +T +L++ G +
Sbjct: 738 --YNLVIEKLCKFG-------YLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMS 788
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
A +V M R+ P ++ + + L GK EA
Sbjct: 789 AYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEA 824
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 210/452 (46%), Gaps = 24/452 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K+ +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKS 282
V Y L+ A +GK +A ++ +++L +G+ P + + ID C N ++ A+
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPNTITYSSMIDGFCKQNR---LDAAEH 381
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +G P+L +++ + RI +G ++L EM G Y + +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
G ++ AL++++E M+ P + + LL GLCD G A+ K M K
Sbjct: 442 LVGDLNAALDLLQE-MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 398 -----GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ P++ +++L+ C
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 206/459 (44%), Gaps = 43/459 (9%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S +L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD +++ L+ GLC + R++EA +L + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----------------------- 279
+A+ +L++++ GL+ + I C G+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 280 ------------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y A + A K+G EA E+ +E + +G +P Y+ ++ G C N A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQ-NRLDAA 379
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ + GC N T+ L+DG C R + +L EM TYN LI G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G A+ L+EMIS PDI +L+ +C N
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 199/441 (45%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + T ++++++ K+++L+AA H+ +L +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + + EM G D +Y+ L+ G LN
Sbjct: 390 G--CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G DIV TLL LCD GK++DA+++ K+++K K
Sbjct: 448 AALDLLQEMI----SSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKK------ 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
D++ + G P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 497 ------------DLDASHPF------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V + L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VAN TY L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 657 MLTGLWSKEELKRAVAMLEKL 677
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 194/492 (39%), Gaps = 55/492 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F + E R N + +++ L RI E ++D+M D + + T
Sbjct: 168 ALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 87 IRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHILF------- 138
+ + G A++L + + + + + ++ ++ + K+ + A LF
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 139 ---------------------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
L+ ++ + + N L++ + + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
++ EM +G P+ +Y ++ G C RL+ A H MF+ ++ KG +++ + TL
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH----MFYLMATKGCSPNLITFNTL 401
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ C +I D M++L ++ GL A + + + G D+ A L+ E + G
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG-DLNAALDLLQEMISSG 460
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT-----------KGFWPSLVMYEAKLAA 340
P + + + L + G++ + ++ M+ G P + Y ++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L +G EA E+ EE +G VP Y+ ++ GLC A M +
Sbjct: 521 LINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N T+ L++G C+ GR + + EM R TY LI G +G A+
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638
Query: 461 LEEMISQAKLPD 472
+EMIS PD
Sbjct: 639 FQEMISSGVYPD 650
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 215/450 (47%), Gaps = 21/450 (4%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
K P+ N P Y MI L + + E E+ +MK + ++T I +G L
Sbjct: 222 KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNL 281
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----I 151
+ A ++K +++ +NT+L ++ ++E L W+V + +
Sbjct: 282 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL-------WKVMEKEGCRTV 334
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S N+L+ L + + D A+ +++ + + C D +Y +L+ GLC + LN+A +L
Sbjct: 335 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394
Query: 212 MFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
++ G G+ D Y +++ LC +G++ + +L+++ + G K P +
Sbjct: 395 -----AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK-PNPYVCNAVING 448
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+E A + +G P++ +Y+ + L R E ++ EM KG+ P+
Sbjct: 449 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPN 508
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y + L + +D AL + + + KG F P V+++NI++ GLC +G A+
Sbjct: 509 MITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLY 567
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M KQ CV N T+ L++G + F AS++ + +L P + +YN+ ++GLCS
Sbjct: 568 SEM-KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCS 626
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +AV +L + + + LP W+ LV
Sbjct: 627 CHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 234/546 (42%), Gaps = 83/546 (15%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKY---PNYRHNGPVYASMIGILSESNRITE 63
RL P ++ K P AL IF+ E + P R Y S++ L ESN+ E
Sbjct: 52 RLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRS----YNSLLNALIESNKWDE 107
Query: 64 M-----------------------------------KEVIDQMKGDSCECKDSVFATAIR 88
KE+++ M G + T I
Sbjct: 108 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLIN 167
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+ A+ G +++A+ LF + + +N L+ K+ + A ++ R G V
Sbjct: 168 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 227
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
I S N++++ LC+C + D + ++ M D +Y L+ GLC L+ AT +
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ---ILEK----------ILRKG 255
M ++ G D+V+Y T+L G+I++ ++ ++EK IL +G
Sbjct: 288 YKEM----AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRG 343
Query: 256 LKAPKSRRHRI---DLCP----CND----GEDIEG--AKSLINEALI--------RGGIP 294
L I +L P C D G + G +N+AL RG +
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ A YS+M L EGR+ E VLD+M G P+ + A + + +++AL
Sbjct: 404 TFA-YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ KG F PTV YN L+ GL A + A +K+M Q G N TY +L++GLC
Sbjct: 463 GNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEM-LQKGWKPNMITYSLLMNGLC 520
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ + A + + L + + P V+ +N++I GLCS GK +A+ EM + +P++
Sbjct: 521 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLV 580
Query: 475 VWSSLV 480
++L+
Sbjct: 581 THNTLM 586
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 220/484 (45%), Gaps = 51/484 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ L+P + +++K +K+P +AL IF ++ ++P Y H V+ ++ L + +
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIF-DSVTRFPGYSHTPYVFHHILKRLFDPKLVAH-- 61
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKE 124
YA+ ++A+ +F+ + + F C +S+N+LL
Sbjct: 62 -----------------------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 98
Query: 125 MVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+++ +K + A FL G + +Q+ N+L+ + C+ ++ D A + M QG
Sbjct: 99 LIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS 156
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY L+ L + +++A L F + ++G D+ Y L+ +G I +
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKL----FDEMPERGVTPDVACYNILIDGFFKKGDILN 212
Query: 244 AMQILEKILRKGLKAPKSRRHRI---DLCPCND-GEDIEGAKSLINEALIRGGIPSLASY 299
A +I E++L+ P + + LC C E E + RG L +Y
Sbjct: 213 ASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE--RG--QDLYTY 268
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE---VIEE 356
S + L G + +V EM G P +V+Y L + G ++E LE V+E+
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 328
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E + TV YNIL++GL + A+ + + ++ C A+ TYG+LV GLC++
Sbjct: 329 EGCR-----TVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKN 382
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +A +LEE Y+ +I GLC G+ E L++M P+ V
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442
Query: 477 SSLV 480
++++
Sbjct: 443 NAVI 446
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 37/366 (10%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L++ + R + + M + P+ SY+ L++GLC R +EA L+ M
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------K 260
R + S D+V Y TLL C GK++++ ++L++++ +GL+ K
Sbjct: 72 ISRGGR--STPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCK 129
Query: 261 SRRH-----------RIDLCP-----------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
S R R CP C +++E A SL+ + G + +
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVT 189
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L GR+ E +++L+ M+ G P +V Y + + L K G V +A +V+E+ M
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ-M 248
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V YN +L GLC +G A+ +++M+ GC N Y +VDGLC+ GR
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA V+E M P V TY+ L+ GLC GK EAV + EM + P+ + S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 479 LVASVC 484
LV +C
Sbjct: 369 LVHGLC 374
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 175/409 (42%), Gaps = 92/409 (22%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV-----LCQCRRSDLAL 171
+++TLL K K+E + L EV SR + LM LC+ R AL
Sbjct: 84 TYSTLLSGYCKAGKVEESRELL------KEVISRGLRPDALMYTKVVASLCKSARLGEAL 137
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ +EM GC P +++ L+ G C ++ L A LL M + G D+V Y TL
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM----AASGVKADVVTYNTL 193
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ LC G++Q+A Q+LE++ G
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCA---------------------------------- 219
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P + +YS+ L G++++ +VL++MR P++V Y L L K G +D AL
Sbjct: 220 --PDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 352 EVIE-----------------------------------EEMVKGTFVPTVRVYNILLKG 376
E++E E M + P V Y+ L+ G
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW- 435
LC AG AV +++M+ + GC N TY LV GLC GR EA R++EEM
Sbjct: 338 LCKAGKIEEAVEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396
Query: 436 ----PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYN LI GLC G+ +A+ + + M SQ PD +S++V
Sbjct: 397 HHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 209/473 (44%), Gaps = 30/473 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P +T L KQ P ++ + A++ PN Y ++ L + R E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVS----YNGLLEGLCKLERWHE 63
Query: 64 MKEVIDQM--KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQS 117
+E++ M +G ++T + Y +AG++ E+ L K + + + + +T+
Sbjct: 64 AEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+L K LE + C + + N L+ C+ + ++A + Q+M
Sbjct: 124 VASLCKSARLGEALELLEEMIRAGCC-----PTLITFNTLISGCCREKNLEMADSLLQKM 178
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G D +Y+ LM GLC RL EA LL R+ G D+V Y + ++ LC
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLL----ERMKASGCAPDVVAYSSFVYGLCK 234
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIP-S 295
GK+ DA Q+LE+ +R P + L C G+ I+ A ++ + G +
Sbjct: 235 SGKVLDAHQVLEQ-MRDSHHDPNVVTYNTILDGLCKSGK-IDTALEMMEQMASSDGCGLN 292
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ YS + L GR E V++ M G P +V Y + + L K G ++EA+E +
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG----CVANGETYGILVD 411
E ++G P Y L+ GLC G A A +++MS G C + TY L+
Sbjct: 353 EMAMEGCK-PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
GLC+ GR +A + + M + P +Y+ ++ GL G+ +A M L E+
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L ++ R+ E ++++++MK C +++ + ++G++ +A + + +
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++NT+L + K K++ A + + + + ++D LC+ R
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A V + M GC PD +Y L+ GLC ++ EA + M + +G + V
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM----AMEGCKPNAV 364
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKA---PKSRRHRIDLCP--CNDGEDIEGAK 281
Y +L+ LC G++ +A +++E++ G P S L C G I+ A
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR-IDDAL 423
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+G P SYS + L GR ++ + +L E+R
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 25/471 (5%)
Query: 33 EAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA+E + + G + Y S+I S + + K + ++M + + I
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLI 198
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G++ EA L + + Q C+ +++TL+K + + ++ A LF+ S
Sbjct: 199 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM-SMQKLGC 257
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQG-----CYPDRESYHILMKGLCNDRR 201
+ + LM LCQ + AL + QEM + G C P SY I++ GLC DRR
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L F + +G D++ Y TL+ C GK + A + ++L G++ +
Sbjct: 318 EDEAREL----FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 373
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G+ IE A L+ + RG IP + + + + L + RI + ++ +
Sbjct: 374 TSSVLIDMLCKKGKVIE-ANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLK 432
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV------PTVRVYNILLK 375
M+ G P++V + L + G + ALE + + M+ T P Y+I++
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALE-LHKNMLSDTSPYGINCKPNAISYSIIID 491
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC G A K+M K +G + + +Y L+ G CR G++ +A + EM+
Sbjct: 492 GLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 550
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P V T++VLI LC GK EA LE MI + +P+ +++LV +C N
Sbjct: 551 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 601
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 221/495 (44%), Gaps = 59/495 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE----CKDSV--FATAIRTYARAGQ 95
R + Y +++ L ++ +I + +M D+ + CK ++ ++ I + +
Sbjct: 77 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRR 136
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+EA LFK + + S+ +L+ + K E A LF ++S + + +
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF-NEMLDVGIRSDVTTSS 195
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+D+LC+ + A + + M +GC D +Y L+KGLC R++EAT L SM
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSM--- 252
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL----RKGLKA-PKSRRHRI---D 267
+ G D + Y TL+ LC G I A+Q+ +++L R G+K P + I
Sbjct: 253 -QKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311
Query: 268 LCP---------------------------------CNDGEDIEGAKSLINEALIRGGIP 294
LC C G+ E AK L NE L G P
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK-WEKAKCLFNEMLDVGIQP 370
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ + S + L +G+++E +K+L+ + +G P +V + L + +A ++
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-----VGCVANGETYGIL 409
+ M K +P V L+KGLC +GN +A+ K M + C N +Y I+
Sbjct: 431 LK-MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DGLC+ GR EA + +EM P V +Y LI G C GK +A EM+
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549
Query: 470 LPDISVWSSLVASVC 484
PD++ +S L+ +C
Sbjct: 550 QPDVTTFSVLIDMLC 564
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 199/445 (44%), Gaps = 53/445 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I + + ++ E E+++ M C ++T I+ +++EA LF ++ +
Sbjct: 16 LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++ TL+K + + K+ A +L S YG + K + S ++++D LC+ R
Sbjct: 76 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A +F+EM QG PD SY L+ G C + +A L M G D+
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML----DVGIRSDV 191
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
L+ LC +GK+ +A ++LE +++
Sbjct: 192 TTSSMLIDILCKEGKVIEANELLEVMIQ-------------------------------- 219
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
RG I + +YS + L + RI E ++ M+ G P + Y + L + G
Sbjct: 220 ----RGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275
Query: 346 MVDEALEVIEEEMVKGT------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
++ AL+ + +EM+ T PT+ Y+I++ GLC A K+M Q G
Sbjct: 276 NINTALQ-LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ-GI 333
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ + +Y L+ G C G++ +A + EML P V T +VLI LC GK EA
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
LE +I + +PD+ ++LV +C
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLC 418
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 218/494 (44%), Gaps = 57/494 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDS----CECKDSV--FATAIRTYARAGQ 95
R + Y +++ L ++ I ++ +M D+ +CK ++ ++ I + +
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+EA LFK + + S+ TL+ K E A LF ++ + + +
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF-NEMLDVGIQPDVTTSS 376
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+D+LC+ + A + + + +GC PD + L+KGLC R+++AT L F +
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL----FLK 432
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK----GLKA-PKSRRHRI---D 267
+ + G ++V TL+ LC G I+ A+++ + +L G+ P + + I
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492
Query: 268 LCPCNDGED-----------------------IEG---------AKSLINEALIRGGIPS 295
LC C ++ I G AK L NE + G P
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ ++S + L EG+++E +++L+ M +G P+ V Y + L + + EA ++
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-----TYGILV 410
+ M K +P V Y L+KGLC GN A+ KKM G +Y I++
Sbjct: 613 K-MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 671
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DGLC+ GR EA + +EM P V +Y LI G C GK +A EM+ Q
Sbjct: 672 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 731
Query: 471 PDISVWSSLVASVC 484
+ +S ++ C
Sbjct: 732 LNAVTYSVMIHGFC 745
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 187/419 (44%), Gaps = 53/419 (12%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I +L + ++ E ++++ + C T ++ ++++A LF + +
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C+ + TL+K + + ++ A ++L S YG K S ++++D LC+C
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A +F+EM G PD SY L+ G C + +A +L F + G D+
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL----FNEMVDIGVQPDV 553
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ L+ LC +GK+ +A ++LE +++
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQ-------------------------------- 581
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
RG IP+ +Y+ + L RI E ++ +M+ G P +V Y + L + G
Sbjct: 582 ----RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637
Query: 346 MVDEALEVIEEEMVKGT------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ ALE + ++M+ T F P V Y+I++ GLC G A K+M K +G
Sbjct: 638 NIKTALE-LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM-KALGV 695
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N +Y L+ G CR G+ +A + EM+ + TY+V+I G C G+ +A+
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 171/385 (44%), Gaps = 54/385 (14%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + + +L+D+ C+ + A + + M +GC D +Y L+KGLC R++EAT
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL-------------- 252
L SM + G D + Y TL+ LC GKI A+ + +++L
Sbjct: 66 QLFMSM----KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTL 121
Query: 253 -------------------RKGLKAPKSRRHRIDLCP--------CNDGEDIEGAKSLIN 285
R+ K K++ D+ C G+ E AK L N
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGK-WEKAKCLFN 180
Query: 286 EALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E ++ GI S + S+M ID L EG+++E +++L+ M +G +V Y + L
Sbjct: 181 E-MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-----C 399
+ EA + M K P Y L+KGLC GN A+ ++M G C
Sbjct: 240 HRISEATRLF-MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+Y I++DGLC+D R EA + +EM + P V +Y LI G C GK +A
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
EM+ PD++ S L+ +C
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLC 383
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 54/351 (15%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G PD + +L+ C + ++ EA LL M Q+G DIV Y TL+ LC + +
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMV----QRGCILDIVTYSTLIKGLCMKHR 60
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI---P 294
I +A Q+ + + G + + C G+ I A L E L + GI P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK-INIALHLHQEMLNDTSQYGIKCKP 119
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA------------KLAALF 342
+L SYS + L + R E ++ EM+ +G P ++ Y + K LF
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179
Query: 343 -----------------------KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
K+G V EA E++E + +G + V Y+ L+KGLC
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV-TYSTLIKGLCM 238
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW---- 435
+ A M K +GC + YG L+ GLC+ G A ++ +EML +
Sbjct: 239 KHRISEATRLFMSMQK-LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 436 --PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + +Y+++I GLC ++ EA +EM +Q +PD+ +++L+ C
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 288 LIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
++ GI + S + ID++ EG+++E +++L+ M +G +V Y + L
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---SKQVG--CVA 401
+ EA ++ M K P Y L+KGLC G +A+ ++M + Q G C
Sbjct: 61 ISEATQLFMS-MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+Y I++DGLC+D R EA + +EM + P V +Y LI G C GK +A
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
EM+ D++ S L+ +C
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILC 202
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 30/289 (10%)
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG----------LKAPKSRRHRIDLC 269
G D+ L+ C +GK+ +A ++LE ++++G L +HR
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR---- 60
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG----DKVLDEMRTK 325
I A L G P +Y + L G+I ++L++
Sbjct: 61 -------ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 113
Query: 326 GF--WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P+LV Y + L KD DEA E+ +E +G +P V Y L+ G C +G
Sbjct: 114 GIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQG-MMPDVISYTSLIHGFCRSGKW 172
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A +M VG ++ T +L+D LC++G+ +EA+ +LE M+ R + TY+
Sbjct: 173 EKAKCLFNEML-DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 231
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
LI+GLC + EA M PD + +L+ + C T ++N
Sbjct: 232 LIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL-CQTGNINT 279
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 212/478 (44%), Gaps = 30/478 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
NG Y+S++ +L+ S +EM+ V++ M+ + + I+ Y+ +G + +A+ L+
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 104 ----KNLSQFNCVNWTQSFNTLL-----------------KEMVKESKLEAAHILFLRSC 142
K + F V S +L K + KE KLE L +
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKL-IEDR 211
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+G I N L+D C+ ++A +F E+ +G P E+Y ++ G C
Sbjct: 212 WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDF 271
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
LL M + +G ++ +Y T++ A G I A++ +E ++ G K
Sbjct: 272 KAIDRLLMEM----NSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C DG+ + A L+ +AL +G +P+ SY+ + +G L EM
Sbjct: 328 YNTLISGSCRDGK-VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 386
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P LV Y A + L G VD AL + E+ + +G F P +YNIL+ GLC
Sbjct: 387 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF-PDAGIYNILMSGLCKKFK 445
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + L +M Q + + Y LVDG R+G EA ++ E + + P + YN
Sbjct: 446 LPAAKLLLAEMLDQ-SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 504
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I+G C G +A+ + M + PD +S+++ DL+ +K ++
Sbjct: 505 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY-VKQHDLDGAQKMFREM 561
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 188/395 (47%), Gaps = 21/395 (5%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
+A +L+EAV LF+ L Q V ++NT++ K + A+ L R + S I
Sbjct: 67 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N ++ L + RR + AL +F+EM + P+ +Y+IL+ LC + +LN A +
Sbjct: 127 -AYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G +++ ++ LC K+++A I E G+ + +
Sbjct: 185 M----ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE-----GMDDKVCTPNAVTFSSL 235
Query: 272 NDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
DG ++ A SL + L G +P Y+++ + GR +G K+ EM G
Sbjct: 236 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 295
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAV 385
P L + + +FK G ++ + E G F+P R Y+IL+ GL AG N
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHG-FIPDARSYSILIHGLVKAGLANETY 354
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ Y K+ GCV + Y ++DG C+ G+ +A ++LEEM ++ + P V TY +I
Sbjct: 355 ELFY---AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 411
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL I + EA M EE S ++ V+SSL+
Sbjct: 412 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 184/430 (42%), Gaps = 43/430 (10%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI L ++ ++ E + + M C F++ I + G++++A SL++ +
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
V + +L++ K + E H ++ + + +N MD + + ++
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG-CSPDLTLINTYMDCVFKAGETEKG 318
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+F+E++ G PD SY IL+ GL NE Y +F+ + ++G D Y
Sbjct: 319 RALFREINAHGFIPDARSYSILIHGLVKAGLANET----YELFYAMKEQGCVLDTHAYNA 374
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ C GK+ A Q+LE E ++
Sbjct: 375 VIDGFCKSGKVNKAYQLLE------------------------------------EMKVK 398
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +Y ++ L R+ E + +E ++ G ++V+Y + + K G +DEA
Sbjct: 399 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 458
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EE M KG P V +N LL L A A++ + M K + C N TY IL+
Sbjct: 459 YLIMEELMQKG-LTPNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILI 516
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+GLCR +F +A +EM P TY +I GL G EA + +
Sbjct: 517 NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI 576
Query: 471 PDISVWSSLV 480
PD + +++++
Sbjct: 577 PDSASYNAMI 586
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 204/466 (43%), Gaps = 44/466 (9%)
Query: 54 ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
+L ++NR+ E E+ +Q++ + + T I Y AG+ +EA L + +
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
++N +L + K+ ++E A +F + + + N+L+D+LC+ + + AL +
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEE--MKRDAVPNVPTYNILIDMLCREGKLNAALEI 181
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+M+ G +P+ + +I++ LC ++L EA S+F + K + V + +L+
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC----SIFEGMDDKVCTPNAVTFSSLID 237
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAP-----------------KSRRHRI---------- 266
L G++ DA + EK+L G P K H+I
Sbjct: 238 GLGKCGRVDDAYSLYEKMLDCG-HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 296
Query: 267 -DLCPCNDGED-------IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
DL N D E ++L E G IP SYS + L G E ++
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
M+ +G Y A + K G V++A +++EE VKG PTV Y ++ GL
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG-HPPTVVTYGSVIDGLA 415
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A M ++ +K G N Y L+DG + GR EA ++EE++ + P V
Sbjct: 416 KIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+N L+ L + EA++ + M P+ +S L+ +C
Sbjct: 475 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 520
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 45/357 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY S+I + R + ++ +M C ++ T + +AG+ + +LF+ +
Sbjct: 266 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI---QSLNLLMDVLCQ 163
+ + +S++ L+ +VK + LF Y + + + + N ++D C+
Sbjct: 326 NAHGFIPDARSYSILIHGLVKAGLANETYELF----YAMKEQGCVLDTHAYNAVIDGFCK 381
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A + +EM +G P +Y ++ GL RL+EA Y +F G
Sbjct: 382 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSNGIKL 437
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGL---------------KAPKSRRHRI-- 266
++V+Y +L+ G+I +A I+E++++KGL KA + I
Sbjct: 438 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 497
Query: 267 ----DL-CPCND---GEDIEGAKSL--INEALI-------RGGIPSLASYSAMAIDLYNE 309
DL CP N I G + N+A + G P+ +Y+ M L
Sbjct: 498 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 557
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G I+E + + G P Y A + L +A + EE +KG + T
Sbjct: 558 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHT 614
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 207/469 (44%), Gaps = 33/469 (7%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQM---KG-DSC-------------ECKDS 81
P +RH Y +M LS E + +I + KG DS C +
Sbjct: 95 PTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNF 154
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + Y +G +++A+ F+ + N LL +M+ S F
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTIWTFYSE 213
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ ++Q N+L++ C+ A +F E+ +G P S++ L+ GLC R
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+E L +M + D+ Y L+ LC +G++ A Q+ +++ ++GL
Sbjct: 274 LDEGFRLKKTM----EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL----- 324
Query: 262 RRHRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
R + I DG+ I+ A + ++ L G P L Y+ + L G + + K
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++DEMR G P + Y + K+G ++ A+E+ + +G + V + L+ G
Sbjct: 385 LVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTALISGF 443
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A L++M + G + TY +++DG C+ G ++L+EM I + P
Sbjct: 444 CRDGRVRDAERTLREMV-EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TYNVL+ GLC G+ A M LE M++ PD ++ L+ C N
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 205/443 (46%), Gaps = 22/443 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L + E ++D+M C + F + G+L EA L +
Sbjct: 209 LYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRM 268
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM--DVLCQC 164
CV ++ LLK + S++E A + R+ LN+++ V+ +C
Sbjct: 269 MIRGCVPNAITYGFLLKGLCLASQVEEARTML----------GRVPELNVVLFNTVIGRC 318
Query: 165 ---RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ A +++ M +GC PD +Y IL+ GLC RL A LL M KG
Sbjct: 319 LLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM----EDKGF 374
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
IV Y LL + C G + +LE + KGL + + C D ++ A
Sbjct: 375 APSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKD-RRMDDAM 433
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E +G P + +Y+ + L N ++ E + + + + +G + + Y + AL
Sbjct: 434 RFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHAL 493
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++G +A+ + + ++ G + V YN L+K LC GN ++M L +M+++ G
Sbjct: 494 LRNGSWQDAISLANDMVLHGCSLDIVS-YNGLIKALCRDGNVDRSIMLLSEMAEK-GIKP 551
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N +Y +L+ LC+ R +A + +EML + P + TYN LI GLC +G + A+ L
Sbjct: 552 NNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLL 611
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E++ ++ DI ++ L++ C
Sbjct: 612 EKLHNEDVHADIITYNILISWHC 634
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 27/379 (7%)
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+S+NT+L + L+ R + V + ++ LC+ R+D AL + +
Sbjct: 137 RSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLR 196
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
M GC PD Y ++ LC +NEA LL MF G D+ + ++ L
Sbjct: 197 SMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL----MGCSADVNTFNDIVHGL 252
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G++++A +++++++ +G P + + L +E A++++ G +P
Sbjct: 253 CTLGRLREAARLVDRMMIRGC-VPNAITYGFLLKGLCLASQVEEARTML------GRVPE 305
Query: 296 LASYSAMAIDLYN--------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L + L+N +G++ E ++ + M +KG P Y + L K G +
Sbjct: 306 LN------VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRL 359
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A++++ E KG F P++ Y ILL C G L+ MS + G N E Y
Sbjct: 360 GSAMKLLREMEDKG-FAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK-GLSMNLEGYN 417
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ +C+D R +A R ++EM + Y P + TYN +I LC+ + EA E ++ +
Sbjct: 418 GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE 477
Query: 468 AKLPDISVWSSLVASVCCN 486
+ + +++L+ ++ N
Sbjct: 478 GVVANAITYNTLIHALLRN 496
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 182/405 (44%), Gaps = 12/405 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L ++++ E + M G E +F T I G+L EA L+
Sbjct: 276 NAITYGFLLKGLCLASQVEEAR----TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELY 331
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C +++ L+ + K +L +A + LR I + +L+ C+
Sbjct: 332 ETMGSKGCPPDAHTYSILIHGLCKLGRLGSA-MKLLREMEDKGFAPSIVTYTILLHSFCR 390
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + M +G + E Y+ ++ +C DRR+++A + M +G
Sbjct: 391 NGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEM----KSQGYKP 446
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y T+++ LC+ ++++A + E +L +G+ A + + +G + A SL
Sbjct: 447 DICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGS-WQDAISL 505
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
N+ ++ G + SY+ + L +G + +L EM KG P+ V Y ++ L K
Sbjct: 506 ANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCK 565
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V +ALE + +EM+ P + YN L+ GLC G A+ L+K+ + A+
Sbjct: 566 TRRVRDALE-LSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE-DVHADI 623
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
TY IL+ C+ +AS +L + P T+ ++++
Sbjct: 624 ITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNF 668
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 8/236 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A++ +E K + Y+ + Y ++I L +N++ E + + + + + + T
Sbjct: 432 AMRFMQEMKSQ--GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I R G +A+SL ++ C S+N L+K + ++ ++ + I+ L
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRS-IMLLSEMAEKG 548
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K S NLL+ LC+ RR AL + +EM Q PD +Y+ L+ GLC ++ A
Sbjct: 549 IKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAAL 608
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+LL ++ + DI+ Y L+ C + DA +L + + G+ P R
Sbjct: 609 NLLE----KLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGI-TPNER 659
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 210/478 (43%), Gaps = 44/478 (9%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R L P + ++ Q AL F + ++ YRH+ VY M+ +LS++ +
Sbjct: 46 RGLKPRLVCAVLLSQSDERVALDFFFWSDRQW-RYRHDPIVYCVMLDVLSKTKLCQGARR 104
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V+ M + F + +Y+RAG+L A+ + + + NT + +V
Sbjct: 105 VLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLV 164
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ LE A + FL + + + N L+ C R + A+ + EM +GC PD+
Sbjct: 165 MANMLEKA-LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDK 223
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY+ +M LC +RR+ E ++ M D V Y TL+ LC +A+Q
Sbjct: 224 VSYYTVMGFLCKNRRIREVMDVIEKM----EDTKLLADQVTYNTLIHMLCKHQHADEALQ 279
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
L + ++G + K I C +G ++ AK ++NE RG IP + +Y+A+
Sbjct: 280 FLREAQKRGFQVDKVGYSAIVDSYCKEGR-MDQAKEIVNEMFTRGCIPDVVTYTAIINGF 338
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + + K+L +M G P+ V Y A L
Sbjct: 339 SQAGEVGQARKMLQQMYKHGCKPNTVSYTAFL---------------------------- 370
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
KGLC GNS+ A + K S++ N TY +++ G R+G+ +A V+
Sbjct: 371 --------KGLCQKGNSSEA-REMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+ + ++P N+L++ LC IG+ EA ++EE ++ + +++++ C
Sbjct: 422 REMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFC 479
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 45/445 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++G L ++ RI E+ +VI++M+ + T I + +EA+ +
Sbjct: 226 YYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQ 285
Query: 108 ----QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
Q + V ++ ++ KE + E + +F R C + + +++ Q
Sbjct: 286 KRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCI-----PDVVTYTAIINGFSQ 340
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------- 209
A + Q+M GC P+ SY +KGLC +EA ++
Sbjct: 341 AGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAIT 400
Query: 210 YSM----FWRISQKGSGEDIV-------IYRT------LLFALCDQGKIQDAMQILEKIL 252
YS+ F R + D+V + T LL +LC G++ +A + +E+ L
Sbjct: 401 YSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECL 460
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G + C +DIE A SL+++ + P +Y+ + L +GRI
Sbjct: 461 NMGCAVNAVNFTTVIHRFCQQ-DDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRI 519
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++ +M KG P+ V Y + + G V++ L ++++ + + +N
Sbjct: 520 EEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQ---ECRTAFNQ 576
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+++ LC GN A L K+ + + + T +L++ R G L A +V M R
Sbjct: 577 VIEKLCTFGNLEAADKLLGKVLRTASRI-DANTCHVLMESYLRKGIPLSAYKVACRMFSR 635
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEA 457
S P ++ + + L GK EA
Sbjct: 636 SLIPDLKLCEKVCKKLMQEGKSEEA 660
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A R LE M + P V TYN LI+G C + + +A+ + EM + PD + +++
Sbjct: 171 KALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVM 230
Query: 481 ASVCCN 486
+C N
Sbjct: 231 GFLCKN 236
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 222/489 (45%), Gaps = 24/489 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
++ T + Q ++ K P L+ F K + H + M+ L + + + +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNK--GFSHKEQSFFLMLEFLGRARNLNVARNFL 123
Query: 69 DQMKGDSCEC---KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ S C +D F + IR+Y AG E+V LF+ + Q +FN+LL +
Sbjct: 124 FSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+K + AH LF +R YG V + N L++ C+ D A +F++M+ C
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYG--VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN 241
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ GLC ++ A ++L M + + ++V Y TL+ C + +I +
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD--VHPNVVSYTTLVRGYCMKQEIDE 299
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI---NEALIRGGIPSLASYS 300
A+ + +L +GLK P + + + ++ + K ++ N+A P +++
Sbjct: 300 AVLVFHDMLSRGLK-PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA-PDACTFN 357
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEE 356
+ + G + KV EM P Y + L D A E+ E+
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 357 EMVKGT--FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E++ G P YN + + LC G + A +++ K+ V + +Y L+ G C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR--GVQDPPSYKTLITGHC 475
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+G+F A +L ML R + P +ETY +LI GL IG+ A L+ M+ + LP +
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 475 VWSSLVASV 483
+ S++A +
Sbjct: 536 TFHSVLAEL 544
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 188/448 (41%), Gaps = 21/448 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV- 82
A +IFK+ E Y H P Y ++I L + ++ V+ M + + +V
Sbjct: 228 AFRIFKDM-ELY----HCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 83 -FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ T +R Y +++EAV +F ++ ++NTL+K + + + E IL
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + N+L+ C D A+ VFQEM +PD SY +L++ LC
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 201 RLNEATHLLYSMFWRISQKGSGE---DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ A L +F + G E Y + LC GK + A ++ +++++G++
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P S + I C +G+ + A L+ L R +P L +Y + L G +
Sbjct: 463 DPPSYKTLIT-GHCREGK-FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L M + P + + LA L K +E+ ++ M++ + + +++ L
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLL 579
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ A + ++ + V E G L C + + L+A ++ L +S
Sbjct: 580 FSSAQKEKAFLIVRLLYDNGYLVKMEELLGYL----CENRKLLDAHTLVLFCLEKSQMVD 635
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMI 465
++T N +I GLC + EA E++
Sbjct: 636 IDTCNTVIEGLCKHKRHSEAFSLYNELV 663
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 79/355 (22%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
L F + +G +S+ ++++ L R LN A + L+S+ R + +D +
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQD-RYFN 142
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ + + G Q+++++ + + + G+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGIS-------------------------------- 170
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR-TKGFWPSLVMYEAKLAALFKDGMVD 348
PS+ +++++ L GR + DEMR T G P + + K+ MVD
Sbjct: 171 ----PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 349 EALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETY 406
EA + ++ E+ P V YN ++ GLC AG +A L M K+ V N +Y
Sbjct: 227 EAFRIFKDMELYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIR---------------------------------- 432
LV G C EA V +ML R
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 433 ---SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ P T+N+LI+ C G A+ +EM++ PD + +S L+ ++C
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 210/480 (43%), Gaps = 69/480 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ ++ +IK++ P AL+IF E+ + HN YA+++ L++S + +
Sbjct: 125 PKFISHESAINLIKRETDPQRALEIFNRVAEQR-GFSHNNATYATILHKLAKSKKFQAID 183
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+ QM ++C+ + +F ++ +++ V +F + +
Sbjct: 184 AVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXP----------------I 227
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD-FQGCYP 184
V+E A + +C V+S S + + D A V +EM YP
Sbjct: 228 VREKPSLKA----ISTCLNLLVESNQSS------ITAKNGDIDSAFEVVEEMKKSHVSYP 277
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y L+ GLC RL EA L M +S+ D + Y L+ C K+ A
Sbjct: 278 NLITYSTLINGLCGSGRLKEAIELFEEM---VSKDQILPDALTYNALINGFCHGXKVDRA 334
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++I+E + + G CN P++ +YSA+
Sbjct: 335 LKIMEFMKKNG---------------CN---------------------PNVFNYSALMN 358
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EGR+ E +V DEM++ G P V Y + + G VDEA+E++++
Sbjct: 359 GFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRA 418
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
TV +N++L GLC G A L+++ + G N +Y I+++ LCR+G +A++
Sbjct: 419 DTV-TFNVILGGLCREGRFEEAXGMLERLPYE-GVYLNKASYRIVLNSLCREGELQKATQ 476
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ ML R P T N L+ LC GK +AVM L ++ P+ + W+ LV +C
Sbjct: 477 LVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELIC 536
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 201/472 (42%), Gaps = 89/472 (18%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ K P AL +F+ EK ++H+ P Y+S+I L+ S R ++ ++ ++ +
Sbjct: 56 VKEVKDPCEALALFENYHEK--GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIR 113
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C +++F I+ Y +A + + + LF + FNC F TL
Sbjct: 114 CNETLFVALIQHYGKAHLVEKGIELFHQMPSFNC------FRTL---------------- 151
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMK 194
QS N+L++ L C + A +FQ EMDF+ P+ SY+I++K
Sbjct: 152 --------------QSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR---PNSVSYNIMIK 194
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G +A +L M +KG +V Y + L LC +G++ A+ + + + K
Sbjct: 195 GWIKKGGWEQACNLFDEML----EKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEK 250
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G P+ +Y+ + G+ E
Sbjct: 251 GHH------------------------------------PNAVTYALLMEGWCFIGKYKE 274
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K++ +M G V Y + L K G +DE +E + EM K P V YNIL+
Sbjct: 275 AKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDE-MESLLNEMKKRRLKPDVVTYNILV 333
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
LC G A L KM QVG C N TY +++DG C G F A ++L ML+
Sbjct: 334 NYLCKEGKVGDAYKVLVKM--QVGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSG 391
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMW-LEEMISQAKLPDISVWSSLVASVC 484
++P ++T+ L+ GL + V + LEEM + D W L+ VC
Sbjct: 392 HYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRILIMDVC 443
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D + A + +A P+ SY+ M +G + + DEM KG PS+V
Sbjct: 163 DCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVV 222
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L L + G +D AL + + KG P Y +L++G C G A +
Sbjct: 223 TYNSFLGVLCRKGEMDTALCLFKNMTEKGHH-PNAVTYALLMEGWCFIGKYKEAKKLMFD 281
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M GC YG+L+ L + G E +L EM R P V TYN+L+ LC G
Sbjct: 282 MEFH-GCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEG 340
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
K +A L +M P+ + + ++ CN D + K L +
Sbjct: 341 KVGDAYKVLVKMQVGGCDPNAATYRMMIDGY-CNAGDFDGAMKILNAM 387
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 199/415 (47%), Gaps = 15/415 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES---KLEAAHIL 137
+VF +++Y+ +++AV+ + S+N++L +V+ KL A +
Sbjct: 143 AVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVY 202
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R V + + N+L+ C L F EM+ GC P+ +Y+ L+ C
Sbjct: 203 --REMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R++EA LL SM S KG +++ Y ++ LC +G +++A +ILE++ KG
Sbjct: 261 KMGRIDEAFGLLKSM----SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + + C +G + +I+ ++R G+ PS+ +Y+A+ + +
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQAL--VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ D+MR +G P+ Y + + G+++EA ++ E M + F P+V YN + G
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE-MTESGFSPSVVTYNAFIHG 433
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A+ +++M ++ G + +Y ++ G CR G A ++ +EM+ + P
Sbjct: 434 HCVLERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP 492
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
TY+ LI+GLC + + EA +EM+ PD +++L+ + C DLN
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE-GDLN 546
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 213/486 (43%), Gaps = 22/486 (4%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
R+ T L+Q + S + IF+ K+ Y Y + V+ M+ S N I
Sbjct: 100 TRFKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMID 159
Query: 63 EMKEVIDQMKGDS----CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
+ I+ K +SV +R+ R A +++ + + ++
Sbjct: 160 QAVNTINLAKSSGFMPGVLSYNSVLDAIVRS--RGSVKLSAEEVYREMIRSRVSPNVYTY 217
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKS----RIQSLNLLMDVLCQCRRSDLALHVF 174
N L++ +L+ C+G ++ + + N L+D C+ R D A +
Sbjct: 218 NILIRGFCSVGELQKG-----LGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 272
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M +G P+ SY++++ GLC + + EA +L M + KG D V Y TLL
Sbjct: 273 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY----KGFTPDEVTYNTLLNG 328
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C +G A+ I +++R G+ +P + + ++ A ++ IRG P
Sbjct: 329 YCKEGNFHQALVIHAEMVRNGV-SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + +G + E ++L+EM GF PS+V Y A + ++EAL V+
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E MV+ P V Y+ ++ G C G A ++M ++ G + TY L+ GLC
Sbjct: 448 QE-MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK-GVSPDAVTYSSLIQGLC 505
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R EA + +EML P TY LI C G +A+ +EMI + LPD
Sbjct: 506 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 565
Query: 475 VWSSLV 480
+S L+
Sbjct: 566 TYSVLI 571
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 193/404 (47%), Gaps = 17/404 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + G+L + + F + + C+ ++NTL+ K +++ A L L+S
Sbjct: 221 IRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL-LKSMSSKG 279
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + S N++++ LC+ A + +EM ++G PD +Y+ L+ G C + ++A
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ M + G +V Y L+ ++C + AM+ +++ +GL+ P R +
Sbjct: 340 VIHAEMV----RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR-PNERTYTT 394
Query: 267 DLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ DG +G A ++NE G PS+ +Y+A R+ E V+ EM
Sbjct: 395 LI----DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG P +V Y ++ + G +D A + +++EMV+ P Y+ L++GLC+
Sbjct: 451 VEKGLAPDVVSYSTIISGFCRKGELDRAFQ-MKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A ++M +G + TY L++ C +G +A + +EM+ + + P TY+
Sbjct: 510 LTEACDLSQEM-LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
VLI GL + EA L ++I + +P + +L+ + C N
Sbjct: 569 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CSN 611
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 189/455 (41%), Gaps = 23/455 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I + RI E ++ M + + I R G + EA +
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++NTLL KE A ++ V + + L++ +C+
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG-VSPSVVTYTALINSMCK 366
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + A+ F +M +G P+ +Y L+ G LNEA Y + +++ G
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA----YRILNEMTESGFSP 422
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y + C ++++A+ ++++++ KGL I C GE ++ A +
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE-LDRAFQM 481
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E + +G P +YS++ L R+ E + EM G P Y + A
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G +++AL + +EM+ F+P Y++L+ GL + A L K+ + V +
Sbjct: 542 EGDLNKALH-LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE-ESVPSD 599
Query: 404 ETYGILVD---------------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
TY L++ G C G EA RV E M+ R++ P YNV+I G
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
C G +A +EMI +P +L+ ++
Sbjct: 660 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 323 RTKGFWPSLVMYEAKLAALFKD-GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
++ GF P ++ Y + L A+ + G V + E + EM++ P V YNIL++G C G
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVG 228
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVD------------------------------ 411
+ +M + GC+ N TY L+D
Sbjct: 229 ELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISY 287
Query: 412 -----GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
GLCR+G EA +LEEM + + P TYN L+ G C G ++A++ EM+
Sbjct: 288 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P + +++L+ S+ C +LN + +Q+
Sbjct: 348 NGVSPSVVTYTALINSM-CKARNLNRAMEFFDQM 380
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 142/362 (39%), Gaps = 56/362 (15%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + ++ + E DQM+ + + T I ++R G LNEA + +
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++N + ++E A + ++ + + S + ++ C+
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEA-LGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + QEM +G PD +Y L++GLC RRL EA L M G D
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML----DMGLPPDEF 530
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ A C +G + A+ + ++++ KG P + + + + N AK L+ +
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGF-LPDAVTYSVLINGLNKQARTREAKRLLFK 589
Query: 287 ALIRGGIPSLASYSAMAIDLYN---------------EGRIVEGDKVLD----------- 320
+ +PS +Y + + N +G + E D+V +
Sbjct: 590 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 649
Query: 321 ------------------------EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
EM GF P V + ALFK+GM +E EVI +
Sbjct: 650 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
Query: 357 EM 358
+
Sbjct: 710 TL 711
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 49/455 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L NR+ E ++ +++M + + I + G+++EAV+L +
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ CV ++N+L+ + K + A+ L Y + I + L+ C+ ++
Sbjct: 108 RK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD-IFTYTTLITGFCKSKK 165
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG-EDI 225
SD AL VF+++ +G PD +Y L+ GLC + RL EA L F R+ + GS +
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGSCMPNT 221
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y +L+ C GK+ +AM +LE++ G
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETG------------------------------ 251
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P + +Y+ + R+ + +L++M KG P +V + + + L ++
Sbjct: 252 ------SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A+ ++ E M + + PTV YN +L G C A A K M +++ C N +
Sbjct: 306 RLSDAVHILGE-MRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEMDCPPNVVS 361
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ I++ GLC+ R EA ++EE R P V Y +I GLC K EA +M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 466 SQAK-LPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
+ LP+ +S+LV + CN L+ R +E+
Sbjct: 422 EEPGCLPNSITYSTLVTGL-CNAGMLDRARGYIEK 455
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 188/388 (48%), Gaps = 12/388 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I L ++ R +E +++++M C + T I + ++ + ++A+ +F+ L
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+++ L+ + KE +L+ A LF R + N L+ C+ +
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+++ + M G PD +Y LM G C RL++A Y + ++++KG D+V
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA----YDLLNQMTRKGLTPDVV 292
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ LC + ++ DA+ IL ++ RK +P + L +E A+ + E
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSC-SPTVYTYNTILDGYCRANQLEEARKFMLE 351
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P++ S++ M L R E ++++E R + P +VMY + L ++
Sbjct: 352 EM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA V + + + +P Y+ L+ GLC+AG A Y++K GCV N TY
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK-----GCVPNIGTY 464
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSY 434
+L+D + R +A +L++M+ R +
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 7/305 (2%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
C D +Y L++GLC +RL +A L M KG D+ Y ++ ALC +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMV----SKGFHPDVYTYTAVIHALCVEN 60
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ +A + LE++ + L P + + + G ++ A +L+++ + + +P+ +Y
Sbjct: 61 RLHEARKFLEEMANRNL-TPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTY 118
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+++ L R E +L+EM G P + Y + K D+AL V E+ +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G F P V Y+ L+ GLC G A+ +M K C+ N TY L+ G CR G+
Sbjct: 179 RG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +LE M P V TY L+ G C + + +A L +M + PD+ ++SL
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 480 VASVC 484
+ +C
Sbjct: 298 MDGLC 302
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 40/270 (14%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++ D V Y +L+ LC +++ A+ L K++ KG
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------------------ 43
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
P + +Y+A+ L E R+ E K L+EM + P++V Y
Sbjct: 44 ------------------PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K G VDEA+ ++ + ++ VPT YN L+ GLC A ++ A L++M
Sbjct: 86 VLIDGLCKGGRVDEAVALLSK--MRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVY 143
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
GC+ + TY L+ G C+ + +A RV E+++ R + P V TY+ LI GLC G+
Sbjct: 144 S-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 456 EAVMWLEEMI-SQAKLPDISVWSSLVASVC 484
EA+ MI S + +P+ ++SL++ C
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S++ L NR+++ ++ +M+ SC + T + Y RA QL EA L
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--L 350
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM-----DVL 161
+ +C SFN +++ + K ++ A L E + R + +++M D L
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV------EEARRRRCNPDVVMYTTVIDGL 404
Query: 162 CQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ ++ D A V+++M + GC P+ +Y L+ GLCN L+ A + +KG
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI--------EKG 456
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
+I Y L+ A + +DA ++L+ ++++G +S +
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQSHQR 500
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 213/473 (45%), Gaps = 48/473 (10%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
+IK++K P ALKIF E+ + HN YA+++ L++ + + V+ QM ++
Sbjct: 138 NLIKREKDPQHALKIFNMVSEQ-KGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEA 196
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAA 134
C+ + VF ++ Y++ G + F ++ + ++ ++ L +V ++++
Sbjct: 197 CKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLV 256
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEM-DFQGCYPDRESYHI 191
L L + K + N+L V CRR D+ A V +EM + + YP+ +Y
Sbjct: 257 RKLLLYAKRSLVYKPNVCIFNIL--VKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYST 314
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
LM GLC + RL EA L M +S+ D + Y L+ C +GK A ++E +
Sbjct: 315 LMDGLCRNGRLKEAFELFEEM---VSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFM 371
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
G P++ +YSA+ L G+
Sbjct: 372 KNNGC------------------------------------CPNVFNYSALVDGLCKAGK 395
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + VL EM++ G P + Y + + ++G +DEA+E++ E TV +N
Sbjct: 396 LQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV-TFN 454
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++L GLC G A+ ++K+ +Q G N +Y I+++ L ++ +A+++L ML
Sbjct: 455 VILGGLCREGRFDEALDMIEKLPQQ-GVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLS 513
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R + P T N L+ LC G +A L +++ P W L+ +C
Sbjct: 514 RGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLIC 566
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEAT 206
KS+ + ++ ++++ + + AL +F + Q G + +Y +++ L ++
Sbjct: 127 KSKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVD 186
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCD-QGKIQDAMQILEKILRKGLKAPKSRRHR 265
+L+ M + + G I + + ++ C K+ DA ++ I+R+ +PK+
Sbjct: 187 RVLHQMTYEACKFHEGVFINLMKH--YSKCGFHEKVFDAFLSIQTIVREK-PSPKAISSC 243
Query: 266 IDLCPCNDGEDIEGAKSLI---NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
++L D ++ + L+ +L+ P++ ++ + G I +V+ EM
Sbjct: 244 LNLLV--DSNQVDLVRKLLLYAKRSLVYK--PNVCIFNILVKYHCRRGDIDSAFEVVKEM 299
Query: 323 RTKGF-WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
R + +P+++ Y + L ++G + EA E+ EE + K VP YN+L+ G C G
Sbjct: 300 RNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREG 359
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A ++ M K GC N Y LVDGLC+ G+ +A VL EM P TY
Sbjct: 360 KADRARNVIEFM-KNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITY 418
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI G+ EA+ L EM D ++ ++ +C
Sbjct: 419 TSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLC 461
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 34 AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
A+ K + + Y S+I S + +I E E++ +MK + C+ F + R
Sbjct: 404 AEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCRE 463
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQ 152
G+ +EA+ + + L Q S+ +L + + +L A+ +L L G+ V
Sbjct: 464 GRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGF-VPHYAT 522
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
S LL+ + + +D A +F +D G P +S+ +L+ +C DR+L
Sbjct: 523 SNELLVRLCKEGMANDAATALFDLVDM-GFQPQHDSWELLIDLICRDRKL 571
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 217/462 (46%), Gaps = 25/462 (5%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V P+ L+P L +++K +KSPL+AL +F +A + P + + V+ ++ ++ +
Sbjct: 2 VELPKSLSPHRLLKLLKAEKSPLSALNVF-DAAVRRPGFSPSSAVFHHILRRVAADPGLL 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ + C C + V T ++ YA+ NEA+ +F+ + F C +SFNTL
Sbjct: 61 -LAHAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTL 119
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L V+ + A F + V +++ N+LM V+C+ + + M G
Sbjct: 120 LNAFVESHQWARAEN-FFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAG 178
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PDR +Y L+ G+ L A + F + ++G D+V Y ++ +G
Sbjct: 179 MSPDRITYGTLIGGVAKSGDLGFALEV----FDEMRERGVEPDVVCYNMIIDGFFKRGDF 234
Query: 242 QDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIP-SLA 297
A ++ E++LR+ L P + + LC C G EG + I E + + L
Sbjct: 235 VKAGEMWERLLREELVFPSVVSYNVMISGLCKC--GRFSEGLE--IWERMKKNERKCDLF 290
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+YSA+ L G + KV +EM +G P +V A L L K G V+E E + EE
Sbjct: 291 TYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFE-LWEE 349
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K + + VR YNI LKGL + G A+M + + A+ TYG++V GLC +G
Sbjct: 350 MGKCS-LRNVRSYNIFLKGLFENGKVDDAMMLWDGLLE-----ADSATYGVVVHGLCWNG 403
Query: 418 RFLEASRVLEEMLIRSYWPCVE--TYNVLIRGLCSIGKQYEA 457
A +VLEE R V+ Y+ LI LC G+ EA
Sbjct: 404 YVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEA 445
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 206/448 (45%), Gaps = 36/448 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y MI L + R +E E+ ++MK + +C ++ I + AG L A +++ +
Sbjct: 257 YNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMV 316
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ N +L + K +E L WE + ++S N+ + L
Sbjct: 317 GRGVRPDVVTCNAMLNGLCKAGNVEECFEL-------WEEMGKCSLRNVRSYNIFLKGLF 369
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A+ ++ + D +Y +++ GLC + +N A +L R + G
Sbjct: 370 ENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHR--EGGMD 423
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DG----E 275
D Y +L+ ALC +G++ +A ++E + ++G K + CN DG
Sbjct: 424 VDEFAYSSLINALCKEGRLDEADGVVELMNKRGCK--------FNSHVCNVLIDGFVKHS 475
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A + E +G ++ SY+ + L R E ++EM KG+ P ++ Y
Sbjct: 476 KLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYS 535
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L++ M+D AL + + + G P + +YNI++ LC +G A+ + +
Sbjct: 536 TLIGGLYESNMMDAALRLWHQFLDTG-HKPDIIMYNIVIHRLCSSGKVEDALQLYSTL-R 593
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
Q CV N T+ +++G + G AS++ +L P + +YN+ ++GLCS G+
Sbjct: 594 QKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVT 652
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
+AV +L++ + + LP W+ LV +V
Sbjct: 653 DAVGFLDDALVRGFLPTAITWNILVRAV 680
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 189/456 (41%), Gaps = 18/456 (3%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
+ EA PN Y ++ ++ + + + ++ M G + T I
Sbjct: 138 YFEAARVSPNVE----TYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGV 193
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
A++G L A+ +F + + +N ++ K A ++ R V
Sbjct: 194 AKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS 253
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S N+++ LC+C R L +++ M D +Y L+ GL L A +
Sbjct: 254 VVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYE 313
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M R G D+V +L LC G +++ ++ E++ + L+ R + I L
Sbjct: 314 EMVGR----GVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR--NVRSYNIFLKG 367
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM--RTKGFW 328
+ ++ A L + L A+Y + L G + +VL+E R G
Sbjct: 368 LFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMD 423
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
Y + + AL K+G +DEA V+E +G + V N+L+ G AV
Sbjct: 424 VDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNS-HVCNVLIDGFVKHSKLDSAVK 482
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++MS + GC +Y IL++GL R RF EA + EML + + P + TY+ LI GL
Sbjct: 483 VFREMSGK-GCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ + + PDI +++ ++ +C
Sbjct: 542 YESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLC 577
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 123/311 (39%), Gaps = 46/311 (14%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLL-YSMFW 214
L+ + R + ALHVFQ M GC P S++ L+ + A + Y
Sbjct: 83 LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R+S ++ Y L+ +C +G+ + +L + G+
Sbjct: 143 RVSP-----NVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMS----------------- 180
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
P +Y + + G + +V DEMR +G P +V Y
Sbjct: 181 -------------------PDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCY 221
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ FK G +A E+ E + + P+V YN+++ GLC G + + ++M
Sbjct: 222 NMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMK 281
Query: 395 K-QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K + C + TY L+ GL G A +V EEM+ R P V T N ++ GLC G
Sbjct: 282 KNERKC--DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGN 339
Query: 454 QYEAVMWLEEM 464
E EEM
Sbjct: 340 VEECFELWEEM 350
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 232/546 (42%), Gaps = 73/546 (13%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIG------ILSE 57
R L P ++S+II + TAL+ F +++ Y+H+ + SM+ IL+
Sbjct: 64 RLASTLRPHHVSKIINTHINTDTALQFFYWISKRH-FYKHDMGCFVSMLNRLVKDKILAP 122
Query: 58 SNRI-----------TEMKEVIDQMKGDSCECKDS--------VFATAIRTYARAGQLNE 98
++ + E+K V D + G S DS F T + + +
Sbjct: 123 ADHVRILMIKACRNEDELKRVTDFLHGISSS--DSGLFGFTLYSFNTLLLQLGKFDMVTS 180
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A +++ + +FNT++ + K+ K++ A +L + +++ + L+
Sbjct: 181 AQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEA-VLVFNKIFQFDLCPDAFTYTSLI 239
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
C+ R+ D A VF M GC P+ +Y L+ GLCN+ R+ EA +L M ++
Sbjct: 240 LGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM----TE 295
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
KG + Y + +LCD G++ DA+ ++ + +KG +P + + + +E
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC-SPSVQTYTAIISGLFRAGKME 354
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A + ++ L G +P+ +Y+A+ +L EGR K+ D M G + Y +
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414
Query: 339 AALFKDGMVD-EALEVIEEEMVKGTFVPTVRVYNILL----------------------- 374
LF GM D E V+ +M+K PTV YN L+
Sbjct: 415 KGLF--GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 375 ------------KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
G C G A + +M K G N TY ++DG C++G+ A
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLK-CGISPNQWTYTAMIDGYCKEGKIDVA 531
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ E M +ETYN +I GL + EA + +M Q P+ ++SL+
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591
Query: 483 VCCNTA 488
+C NTA
Sbjct: 592 LCKNTA 597
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 202/440 (45%), Gaps = 12/440 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKN 105
+ +MI IL + ++ E V +++ C D+ + + I + R +L++A +F
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDL-CPDAFTYTSLILGHCRNRKLDKAFEVFDR 257
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + C + +++TL+ + E ++ EA +L + G ++ + + + + LC
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG--IEPTVYTYTVPISSLCDI 315
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R D A+++ + M +GC P ++Y ++ GL ++ L M+ ++ ++G +
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM----ELAIGMYHKMLKEGLVPN 371
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y L+ LC +G+ A++I + + G A ++I + +DIE A +
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI-IKGLFGMDDIEKAMVVF 430
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
N+ L G P++ +Y+ + ++ G + + L M+ P Y ++ K
Sbjct: 431 NKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKG 490
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +D A E M+K P Y ++ G C G VA+ ++M + GC A+ E
Sbjct: 491 GKLDSATSFFYE-MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN-GCSASIE 548
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY ++ GL + RF EA + +M + P TY LI GLC A EM
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ LP+ ++SL+ +C
Sbjct: 609 EKKNCLPNAHTYTSLIYGLC 628
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 220/529 (41%), Gaps = 83/529 (15%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L RI E +++++M E + I + G++++A++L
Sbjct: 266 NSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLV 325
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ + C Q++ ++ + + K+E A ++ + V + + + N L++ LC
Sbjct: 326 RSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTV-TYNALINELCT 384
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC-------------------------- 197
R +AL +F M+ G + ++Y+ ++KGL
Sbjct: 385 EGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVT 444
Query: 198 -------NDRR--LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
N +R LN AT LY M + D Y L+ C GK+ A
Sbjct: 445 YNTLIVENLKRGYLNNATRFLYMM----KESNCEPDERTYCELISGFCKGGKLDSATSFF 500
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++L+ G+ + + C +G+ I+ A SL G S+ +Y+A+ L
Sbjct: 501 YEMLKCGISPNQWTYTAMIDGYCKEGK-IDVALSLFERMEENGCSASIETYNAIISGLSK 559
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
R E +K +M +G P+ + Y + + L K+ + A ++ E M K +P
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE-MEKKNCLPNAH 618
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y L+ GLC G A +++++ GC +TY LV GLCR+GR EAS+++E
Sbjct: 619 TYTSLIYGLCQEGKVDAA----ERLTEN-GCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673
Query: 429 -----------------------------------MLIRSYWPCVETYNVLIRGLCSIGK 453
M ++ + P + Y VLI LC + +
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
EA+ + ++ + D+ VW+ LV + D ++C K L + S
Sbjct: 734 AEEALNIFQSLLKKQWNSDLIVWTVLVDGL-LQEGDSDLCMKFLYLMES 781
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 184/412 (44%), Gaps = 16/412 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L + I + V ++M D + T I + G LN A
Sbjct: 406 NAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFL 465
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVL 161
+ + NC +++ L+ K KL++A F + C + + ++D
Sbjct: 466 YMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC---GISPNQWTYTAMIDGY 522
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + D+AL +F+ M+ GC E+Y+ ++ GL R +EA M +++G
Sbjct: 523 CKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKM----TEQGL 578
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y +L+ LC A +I ++ +K + C +G+ ++ A+
Sbjct: 579 QPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK-VDAAE 637
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L G P++ +YS + L EGR E ++++ M+ KG PS+ +Y + L A
Sbjct: 638 RLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K VD ALE+ VKG F P + +Y +L+ LC + A+ + + K+ +
Sbjct: 694 CKSLKVDCALEIFNLMAVKG-FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK-QWNS 751
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ + +LVDGL ++G + L M R+ P + TY +L R L +GK
Sbjct: 752 DLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 208/460 (45%), Gaps = 45/460 (9%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+++ + + G+SCE + +++ + L +A+ LF ++ + + F L+
Sbjct: 27 IRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLM 86
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + + L+ + +++ I S +L+ C C + AL F ++ G
Sbjct: 87 GVVVRMERPDLVISLY-QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGL 145
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD +++ L+ GLC + R++EA +L + MF + ++V + TL+ LC +G+I
Sbjct: 146 HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP----NVVTFTTLMNGLCREGRIV 201
Query: 243 DAMQILEKILRKGLKAPKSRRHRI--DLCP------------------------------ 270
+A+ +L++++ GL+ + I +C
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAI 261
Query: 271 ----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C DG + A++L E +G P L +Y++M + + GR + +++L EM +
Sbjct: 262 IDSLCKDGRHSD-AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y A + A K+G EA E+ +E + +G +P Y+ ++ G C N A
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQ-NRLDA 378
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ + GC N T+ L+DG C R + +L EM TYN LI
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G +G A+ L+EMIS PDI +L+ +C N
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 209/452 (46%), Gaps = 24/452 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E + QM +C F T + R G++ EAV+L +
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K +A L + + + + ++D LC+ R
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
A ++F EM +G +PD +Y+ ++ G C+ R ++A LL M R IS D+
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-----DV 325
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKS 282
V Y L+ A +GK +A ++ +++L +G+ P + + ID C N ++ A+
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPNTITYSSMIDGFCKQNR---LDAAEH 381
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +G P+L +++ + RI +G ++L EM G Y + +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
G ++ AL++++E M+ P + + LL GLCD G A+ K M K
Sbjct: 442 LVGDLNAALDLLQE-MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 398 -----GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ P++ +++L+ C
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 199/441 (45%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y SMI S R ++ ++++ +M +
Sbjct: 274 AQNLFTEMQEKGIFPDLF----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + T ++++++ K+++L+AA H+ +L +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + + EM G D +Y+ L+ G LN
Sbjct: 390 G--CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G DIV TLL LCD GK++DA+++ K+++K K
Sbjct: 448 AALDLLQEMI----SSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKK------ 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
D++ + G P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 497 ------------DLDASHPF------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V + L+ G C AG
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VAN TY L+ G + G A + +EM+ +P T
Sbjct: 598 DDGLELFCEMGRR-GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 657 MLTGLWSKEELKRAVAMLEKL 677
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 171/402 (42%), Gaps = 19/402 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+++ I + + G+ ++A +LF + + ++N+++ + A L L+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL-LQE 315
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ + + N L++ + + A ++ EM +G P+ +Y ++ G C R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A H MF+ ++ KG +++ + TL+ C +I D M++L ++ GL A +
Sbjct: 376 LDAAEH----MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + G D+ A L+ E + G P + + + L + G++ + ++
Sbjct: 432 TYNTLIHGFYLVG-DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 322 MRT-----------KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
M+ G P + Y ++ L +G EA E+ EE +G VP Y
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITY 549
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+ ++ GLC A M + N T+ L++G C+ GR + + EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R TY LI G +G A+ +EMIS PD
Sbjct: 609 RRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 207/455 (45%), Gaps = 49/455 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L NR+ E ++ +++M + + I + G+++EAV+L +
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ CV ++N+L+ + K + A+ L Y + I + L+ C+ ++
Sbjct: 108 RK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD-IFTYTTLITGFCKSKK 165
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG-EDI 225
SD AL VF+++ +G PD +Y L+ GLC + RL EA L F R+ + GS +
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGSCMPNT 221
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y +L+ C GK+ +AM +LE++ G
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETG------------------------------ 251
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P + +Y+ + R+ + +L++M KG P +V + + + L ++
Sbjct: 252 ------SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A+ ++ E M + + PTV YN +L G C A A K M +++ C N +
Sbjct: 306 RLSDAVHILGE-MRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEMDCPPNVVS 361
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ I++ GLC+ R EA ++EE R P V Y +I GLC K EA +M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 466 SQAK-LPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
+ LP+ +S+L+ + CN L+ R +E+
Sbjct: 422 EEPGCLPNSITYSTLITGL-CNAGMLDRARGYIEK 455
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 186/388 (47%), Gaps = 12/388 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I L ++ R +E +++++M C + T I + ++ + ++A+ +F+ L
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+++ L+ + KE +L+ A LF R + N L+ C+ +
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+++ + M G PD +Y LM G C RL++A Y + ++++KG D+V
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA----YDLLNQMTRKGLTPDVV 292
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ LC + ++ DA+ IL ++ RK + I C + E K ++ E
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE 352
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++ S++ M L R E ++++E R + P +VMY + L ++
Sbjct: 353 M---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA V + + + +P Y+ L+ GLC+AG A Y++K GCV N TY
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK-----GCVPNIGTY 464
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSY 434
+L+D + R +A +L++M+ R +
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 7/305 (2%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
C D +Y L++GLC +RL +A L M KG D+ Y ++ ALC +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMV----SKGFHPDVYTYTAVIHALCVEN 60
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ +A + LE++ + L P + + + G ++ A +L+++ + + +P+ +Y
Sbjct: 61 RLHEARKFLEEMANRNL-TPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTY 118
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+++ L R E +L+EM G P + Y + K D+AL V E+ +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G F P V Y+ L+ GLC G A+ +M K C+ N TY L+ G CR G+
Sbjct: 179 RG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +LE M P V TY L+ G C + + +A L +M + PD+ ++SL
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 480 VASVC 484
+ +C
Sbjct: 298 MDGLC 302
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 40/270 (14%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++ D V Y +L+ LC +++ A+ L K++ KG
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------------------ 43
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
P + +Y+A+ L E R+ E K L+EM + P++V Y
Sbjct: 44 ------------------PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K G VDEA+ ++ + ++ VPT YN L+ GLC A ++ A L++M
Sbjct: 86 VLIDGLCKGGRVDEAVALLSK--MRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVY 143
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
GC+ + TY L+ G C+ + +A RV E+++ R + P V TY+ LI GLC G+
Sbjct: 144 S-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 456 EAVMWLEEMI-SQAKLPDISVWSSLVASVC 484
EA+ MI S + +P+ ++SL++ C
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S++ L NR+++ ++ +M+ SC + T + Y RA QL EA L
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--L 350
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM-----DVL 161
+ +C SFN +++ + K ++ A L E + R + +++M D L
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV------EEARRRRCNPDVVMYTTVIDGL 404
Query: 162 CQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ ++ D A V+++M + GC P+ +Y L+ GLCN L+ A + +KG
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI--------EKG 456
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
+I Y L+ A + +DA ++L+ ++++G +S +
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGGVQSHQR 500
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 211/458 (46%), Gaps = 55/458 (12%)
Query: 2 SVRWPRLLTPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN 59
+++W TP ++ I+K+ P AL+ F +P+Y H+ Y I I +
Sbjct: 62 TIQW----TPQLVNTILKRLWNDGP-KALQFFNLLSH-HPSYSHHPSSYDHAIDISARLR 115
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
++ ++ +M+ FA YA AG+ + AV +F ++ QF C QSFN
Sbjct: 116 DSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFN 175
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
T+L + K ++E A+ LF + + ++ S N++++ C +R++ AL + +EM
Sbjct: 176 TILDVLCKSKRVEMAYNLF--KVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVK 233
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G P+ SY+ ++KG ++NEA + F + ++ D++ Y T++ G
Sbjct: 234 RGLTPNLTSYNTMLKGYFRAGQINEA----WDFFLEMKKRDCEIDVITYTTVIHGFGVAG 289
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+I+ A ++ + +++KG+ +PS+A+Y
Sbjct: 290 EIKRARKVFDTMVKKGV------------------------------------LPSVATY 313
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+A L + + + +EM KG+ P+ + Y + L G ++ A+E +
Sbjct: 314 NAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKD 373
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---RD 416
G P V+ YN++++ CD G A+ +KM+ C+ N +TY IL+ + +
Sbjct: 374 DGC-EPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSG-DCLPNLDTYNILISAMFVRKKS 431
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
L A +L EM+ R + P T+N ++ GL G Q
Sbjct: 432 DDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQ 469
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ VF M GC+ D +S++ ++ LC +R+ A Y++F ++ + D V Y
Sbjct: 155 AVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMA----YNLF-KVFKGKFRADCVSYN 209
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ C + A+++L++++++GL
Sbjct: 210 VMVNGWCLIKRTNKALEMLKEMVKRGL--------------------------------- 236
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P+L SY+ M + G+I E EM+ + ++ Y + G +
Sbjct: 237 ---TPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKR 293
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +V + MVK +P+V YN ++ LC N A++ ++M + G V N TY ++
Sbjct: 294 ARKVFDT-MVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVK-GYVPNSITYNLV 351
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLC G A + M P V+TYN++IR C G+ +A+ ++M S
Sbjct: 352 IRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDC 411
Query: 470 LPDISVWSSLVASV 483
LP++ ++ L++++
Sbjct: 412 LPNLDTYNILISAM 425
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 155/394 (39%), Gaps = 51/394 (12%)
Query: 112 VNWT-QSFNTLLKEMVKESK--LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+ WT Q NT+LK + + L+ ++L Y S ++ D+ + R S
Sbjct: 63 IQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAI----DISARLRDSP 118
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+ M P +++ I+ + + + + A + SM Q G +D+ +
Sbjct: 119 SLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM----HQFGCFQDLQSF 174
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
T+L LC +++ A + K+ + +A
Sbjct: 175 NTILDVLCKSKRVEMAYNLF-KVFKGKFRA------------------------------ 203
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
SY+ M R + ++L EM +G P+L Y L F+ G ++
Sbjct: 204 ------DCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQIN 257
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA + E M K V Y ++ G AG A M K+ G + + TY
Sbjct: 258 EAWDFFLE-MKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK-GVLPSVATYNA 315
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ LC+ A + EEM+++ Y P TYN++IRGLC G+ A+ ++ M
Sbjct: 316 FIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDG 375
Query: 469 KLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
P++ + +LV C+ +++ ++++S
Sbjct: 376 CEPNVQTY-NLVIRYFCDEGEIDKALDLFQKMTS 408
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 20/489 (4%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKY-PNYRHNGPVYASMIGILSESNRITE 63
WP L P LS +I +Q P +L+IF A+ + P + HN Y ++ LS+ +E
Sbjct: 43 WPHRLNPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSE 102
Query: 64 MKEVIDQMKGDSCEC-KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
++ ++ ++ C + T IR Y AG+ A+ F + F +S N LL
Sbjct: 103 IESLLAGLRSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALL 162
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V+ + A ++F + V + S N+L+ LC+ ++A+ V EM G
Sbjct: 163 NSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGL 222
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ SY ++ G ++ A +F + +G D+ Y L+ C GK+
Sbjct: 223 VPNVVSYTTVLGGFVWRGDMDGAM----KVFREVLDRGWSPDVTSYTVLVDGFCRLGKLV 278
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCND---GEDIEGAKSLINEALIRGGIPSLASY 299
DA+++++ + G++ + + C + GE + + +I + L+ G +
Sbjct: 279 DAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVG-----SEL 333
Query: 300 SAMAIDLYNEGRIVEGDKVLDEM--RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+DL E VE + M R V+ + L K G V EA V +E
Sbjct: 334 CCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVF-DE 392
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
KG+ V ++ YN L+ GLC+ G A M ++ G N TY +L+ G C+ G
Sbjct: 393 FGKGS-VASLLTYNTLIAGLCEGGELCEAARLWDDMVEK-GVAPNAFTYNMLIKGFCKVG 450
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
E RVLEEML P TY +LI G+ +G + + + + + D +W+
Sbjct: 451 NAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTGV-DADLWN 509
Query: 478 SLVASVCCN 486
V V N
Sbjct: 510 IFVKPVVGN 518
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 186/391 (47%), Gaps = 8/391 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L+EA+S F + T FN LL + K +K + + R + + + +L
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-TKHHSTLLSLSRQMDSFGIPPDVYTLA 109
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++++ LC R D A ++ G PD ++ L++GLC + ++ EA HL F +
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL----FDK 165
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC G A+++L + + + + C D +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A ++ +E + +G P++ +Y+++ L +++EM P +
Sbjct: 226 VTE-AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+GMV EA +V++ + +G P V YN L+ G C VAV M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ CVAN +Y L++G C+ +A + EEM + P TYN LI GLC +G+
Sbjct: 344 K-DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM+++ ++PD+ + +L +C N
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 43/436 (9%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ EA+ LF + ++ TL+ + K AA I LR
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA-IRLLR 199
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + + L+D LC+ R+ A ++F EM +G P+ +Y+ L+ GLC
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC--- 256
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP- 259
+L E H+ M + K D+ T++ ALC +G + +A +++ ++ +G++
Sbjct: 257 KLCEWKHVTTLMNEMVDSK-IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315
Query: 260 ---------KSRRHRIDL------------CPCN--------DG----EDIEGAKSLINE 286
R+ +D+ C N +G + ++ A L E
Sbjct: 316 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 375
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P+ +Y+ + L + GR+ + + EM +G P LV Y L K+
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435
Query: 347 VDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D+A+ +++ ++G+ + P +++Y +L G+C AG A +S + G N T
Sbjct: 436 LDKAMALLKA--IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWT 492
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I++ GLC+ G EAS++ EM P TYN++ RG + + LEEM+
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Query: 466 SQAKLPDISVWSSLVA 481
++ D+S + LV
Sbjct: 553 ARGFSVDVSTTTLLVG 568
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ L + + E +V+D M E + + + +++ AV +F +
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+CV S+NTL+ K ++ A LF E+ + N L+ LC R
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLF-EEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG--EDIVI 227
A+ +F EM +G PD +Y L LC +R L++A LL ++ +GS DI I
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EGSNWDPDIQI 457
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINE 286
Y T+L +C G+++DA + + KGL+ P + I + C G E +K L +E
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQ-PNVWTYNIMIHGLCKQGLLAEASK-LFSE 515
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P+ +Y+ + + ++L+EM +GF + + L DG+
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 347 VDEALEVI 354
D++++ I
Sbjct: 576 -DQSVKQI 582
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 227/532 (42%), Gaps = 68/532 (12%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
TP L +++Q AL++ A K PN+R N +Y ++ L + MK+++
Sbjct: 52 FTPAQLLDTLRRQNDETAALRLLSWAS-KQPNFRPNSSIYEEILRKLGKVGSFNSMKDIL 110
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVK 127
+MKG C+ V I +YA+ E + + + + +F T +N LL +V
Sbjct: 111 QEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVD 170
Query: 128 ESKL---EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+KL E H + +K + + N+L+ LC+ + A+ V +EM G P
Sbjct: 171 GNKLKLVENVH----STMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVP 226
Query: 185 DRESYHILMKGL-----------------------------------CNDRRLNEATHLL 209
D +++ LM+G C + R+ EA +
Sbjct: 227 DEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFI 286
Query: 210 YSM------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
M + + KG D Y L+ +LC +GK+Q+A+ +L ++ G
Sbjct: 287 DEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCA 346
Query: 258 APKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
R+ I DG + IE A+ + ++ I+G + +Y+ + L R+
Sbjct: 347 -----RNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQ 401
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +++D+M +G P Y + L ++G + +A ++++ M P + Y L
Sbjct: 402 EAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQT-MTSNGCEPDIVTYGTL 460
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ GLC AG VA L+ + + G V Y ++ L + R EA R+ EM +
Sbjct: 461 IGGLCKAGRVEVASRLLRSIQLK-GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKG 519
Query: 434 YWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY ++ RGL + G EAV ++ EMI + LP+ S + L +C
Sbjct: 520 NTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 205/444 (46%), Gaps = 31/444 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ +L + N++ ++ V M + S F I+ +A Q+ A+ + + +
Sbjct: 160 LYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEM 219
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAH---------------ILFLRSCYGWEVKSRI 151
S + V ++F TL++ ++E ++ A + +G+ + RI
Sbjct: 220 SSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRI 279
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ +D + + +A+ ++ EM +GC PD +Y++L+ LC +L EA LL
Sbjct: 280 EEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLRE 339
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M IS G +++ Y TL+ C KI++A +I +++ +GL R+ +
Sbjct: 340 M--EIS--GCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLS-----RNSVTYNTL 390
Query: 272 NDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
DG ++ A L+++ ++ G P +Y++M EG I + ++ M + G
Sbjct: 391 IDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGC 450
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + L K G V+ A ++ +KG V T YN +++ L + A+
Sbjct: 451 EPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG-MVLTPHAYNPVIQALFKRKRTKEAM 509
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIR 446
++M ++ G + TY I+ GL G + EA + EM+ + + P ++ +L
Sbjct: 510 RLFREMEEK-GNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAE 568
Query: 447 GLCSIGKQYEAVMWLEEMISQAKL 470
GLCS+ + + ++ ++ +A
Sbjct: 569 GLCSLSMEDTLIKLVDLVMEKANF 592
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 124/311 (39%), Gaps = 34/311 (10%)
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
RR N+ T L + W Q + IY +L L G IL+++ KGL
Sbjct: 62 RRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEM--KGLDCQ 119
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE--GRIVEGDK 317
R + D L E L + + A+ LYN +V+G+K
Sbjct: 120 IDRGVLLIFI------DSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNK 173
Query: 318 ------VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
V M +KG P + + + AL K + A+ V+EE M VP + +
Sbjct: 174 LKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEE-MSSYGLVPDEKTFT 232
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM-- 429
L++G + GN A +K+ GC T +LV G C++GR EA ++EM
Sbjct: 233 TLMQGFIEEGNMDGA-FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSN 291
Query: 430 ------LIRSY--------WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
I Y P TYN+LI LC GK EA+ L EM ++
Sbjct: 292 EGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVIT 351
Query: 476 WSSLVASVCCN 486
+++L+ C N
Sbjct: 352 YNTLIDGFCKN 362
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 186/391 (47%), Gaps = 8/391 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L+EA+S F + T FN LL + K +K + + R + + + +L
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-TKHHSTLLSLSRQMDSFGIPPDVYTLA 109
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++++ LC R D A ++ G PD ++ L++GLC + ++ EA HL F +
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL----FDK 165
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC G A+++L + + + + C D +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A ++ +E + +G P++ +Y+++ L +++EM P +
Sbjct: 226 VTE-AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+GMV EA +V++ + +G P V YN L+ G C VAV M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ CVAN +Y L++G C+ +A + EEM + P TYN LI GLC +G+
Sbjct: 344 K-DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM+++ ++PD+ + +L +C N
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 202/447 (45%), Gaps = 43/447 (9%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ EA+ LF + ++ TL+ + K AA I LR
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA-IRLLR 199
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + + L+D LC+ R+ A ++F EM +G P+ +Y+ L+ GLC
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC--- 256
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP- 259
+L E H+ M + K D+ T++ ALC +G + +A +++ ++ +G++
Sbjct: 257 KLCEWKHVTTLMNEMVDSK-IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315
Query: 260 ---------KSRRHRIDL------------CPCN--------DG----EDIEGAKSLINE 286
R+ +D+ C N +G + ++ A L E
Sbjct: 316 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 375
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P+ +Y+ + L + GR+ + + EM +G P LV Y L K+
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435
Query: 347 VDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D+A+ +++ ++G+ + P +++Y +L G+C AG A +S + G N T
Sbjct: 436 LDKAMALLKA--IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWT 492
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I++ GLC+ G EAS++ EM P TYN++ RG + + LEEM+
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Query: 466 SQAKLPDISVWSSLVASVCCNTADLNV 492
++ D+S + LV + + D +V
Sbjct: 553 ARGFSVDVSTTTLLVGMLSDDGLDQSV 579
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ L + + E +V+D M E + + + +++ AV +F +
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+CV S+NTL+ K ++ A LF E+ + N L+ LC R
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLF-EEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG--EDIVI 227
A+ +F EM +G PD +Y L LC +R L++A LL ++ +GS DI I
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EGSNWDPDIQI 457
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINE 286
Y T+L +C G+++DA + + KGL+ P + I + C G E +K L +E
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQ-PNVWTYNIMIHGLCKQGLLAEASK-LFSE 515
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P+ +Y+ + + ++L+EM +GF + + L DG+
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 347 VDEALEVI 354
D++++ I
Sbjct: 576 -DQSVKQI 582
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 19/406 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--- 137
+ I Y ++G++++A+ + + +S V ++NT+L+ + KL EA +L
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSVAPDV---VTYNTILRSLCDSGKLKEAMEVLDRQ 234
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R CY + + +L++ C A+ + EM +GC PD +Y++L+ G+C
Sbjct: 235 LQRECY-----PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ RL+EA L +M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 290 KEGRLDEAIKFLNNM----PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC- 344
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+P I + + A ++ + G +P+ SY+ + E ++ +
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L+ M ++G +P +V Y L AL KDG VD A+E++ + KG P + YN ++ GL
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC-SPVLITYNTVIDGL 463
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G + AV L++M ++ G + TY L+ GL R+G+ EA ++ +M S P
Sbjct: 464 TKVGKTEYAVELLEEMRRK-GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPS 522
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN ++ GLC + A+ +L M+ + P + ++ L+ +
Sbjct: 523 AVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 193/399 (48%), Gaps = 13/399 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + R+G+ +A + + L V ++N L+ K +++ A + R
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLER----MS 203
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N ++ LC + A+ V + CYPD +Y IL++ CND + +A
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M +KG D+V Y L+ +C +G++ +A++ L + G K P H I
Sbjct: 264 KLLDEM----RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCK-PNVITHNI 318
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L C+ G ++ A+ L+++ L +G PS+ +++ + L + + VL++M
Sbjct: 319 ILRSMCSTGRWMD-AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 377
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ + Y L ++ +D A+E +E + +G + P + YN LL LC G
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY-PDIVTYNTLLTALCKDGKVDA 436
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AV L ++S + GC TY ++DGL + G+ A +LEEM + P + TY+ L+
Sbjct: 437 AVEILNQLSSK-GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
RGL GK EA+ +M + P +++++ +C
Sbjct: 496 RGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 534
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 184/396 (46%), Gaps = 52/396 (13%)
Query: 112 VNWTQSF-----NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
VN ++SF N L+++V+ +LE R Y ++ I +L+ C+ +
Sbjct: 98 VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRG-FCRSGK 156
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + + ++ G PD +Y++L+ G C +++A +L M D+V
Sbjct: 157 TKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM-------SVAPDVV 209
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+L +LCD GK+++AM++L++ L+
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQ--------------------------------- 236
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
R P + +Y+ + N+ + + K+LDEMR KG P +V Y + + K+G
Sbjct: 237 ---RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 293
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA++ + G P V +NI+L+ +C G A L M ++ GC + T+
Sbjct: 294 LDEAIKFLNNMPSYGC-KPNVITHNIILRSMCSTGRWMDAERLLSDMLRK-GCSPSVVTF 351
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++ LCR A VLE+M P +YN L+ G C K A+ +LE M+S
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ PDI +++L+ ++ C ++ + L QLSS
Sbjct: 412 RGCYPDIVTYNTLLTAL-CKDGKVDAAVEILNQLSS 446
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 174/383 (45%), Gaps = 55/383 (14%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
+E YP+ Y +I + + + +++D+M+ C+ + I + G
Sbjct: 237 RECYPDV----ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL---FLRSCYGWEVKSR 150
+L+EA+ N+ + C + N +L+ M + ++A +L + C
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC-----SPS 347
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L++ LC+ R A+ V ++M GC P+ SY+ L+ G C +++++ A L
Sbjct: 348 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLE 407
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M R G DIV Y TLL ALC GK+ A++I
Sbjct: 408 IMVSR----GCYPDIVTYNTLLTALCKDGKVDAAVEI----------------------- 440
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+N+ +G P L +Y+ + L G+ ++L+EMR KG P
Sbjct: 441 -------------LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD 487
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y L L ++G VDEA+++ +M + P+ YN ++ GLC A ++ A+ +L
Sbjct: 488 IITYSTLLRGLGREGKVDEAIKIF-HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 546
Query: 391 KKMSKQVGCVANGETYGILVDGL 413
M ++ GC TY IL++G+
Sbjct: 547 AYMVEK-GCKPTEATYTILIEGI 568
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 186/402 (46%), Gaps = 11/402 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +IG +S I + EV+++M S + T +R+ +G+L EA+ +
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ L++ +S + A L L K + + N+L++ +C+ R
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKL-LDEMRKKGCKPDVVTYNVLINGICKEGR 293
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ M GC P+ +++I+++ +C+ R +A LL M +KG +V
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML----RKGCSPSVV 349
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ LC + + A+ +LEK+ + G P S + L + ++ A +
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGC-VPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG P + +Y+ + L +G++ ++L+++ +KG P L+ Y + L K G
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A+E++EE KG P + Y+ LL+GL G A+ M + + + TY
Sbjct: 469 TEYAVELLEEMRRKG-LKPDIITYSTLLRGLGREGKVDEAIKIFHDM-EGLSIKPSAVTY 526
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++ GLC+ + A L M+ + P TY +LI G+
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I + G+ AV L + +
Sbjct: 420 TYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEM 479
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +++TLL+ + +E K++ A +F G +K + N +M LC+ ++
Sbjct: 480 RRKGLKPDIITYSTLLRGLGREGKVDEAIKIF-HDMEGLSIKPSAVTYNAIMLGLCKAQQ 538
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ A+ M +GC P +Y IL++G+ +
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 193/398 (48%), Gaps = 8/398 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + R +L A S + + T +FNTLL + E ++ A L
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V I +LN +++ LC R A+ + M GC P++ +Y ++ +C A
Sbjct: 192 VPDLI-TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M R + +V Y ++ LC G++ DA+ ++ KG+KA + +
Sbjct: 251 DLLRKMEHRKIK----PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C+ G +GA+ L+ + + R P++ ++SA+ L EG++ E + +EM T+G
Sbjct: 307 IGSFCSFGRWDDGAQ-LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+ + Y + + L D +DEA ++++ + KG P + YNIL+ G C A
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC-DPDIWTYNILINGFCKAKQVDDG 424
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +KMS + G +A+ TY L+ G C+ + + A +V +EM+ + P + TY +L+
Sbjct: 425 MRLFRKMSLR-GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLD 483
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ EA+ L++M DI +++ ++ +C
Sbjct: 484 GLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMC 521
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 196/446 (43%), Gaps = 52/446 (11%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV+LF+++ + + FN L + + + + L L C E+K + +
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYD----LVLALCKQMELKGIAYDLYT 127
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN++++ C+ R+ A ++ G P+ +++ L+ GLC + R+ EA L+ M
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187
Query: 214 W-------------------------------RISQKGSGEDIVIYRTLLFALCDQGKIQ 242
R+ G + Y +L +C G
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+ +L K+ + +K I C DG ++ A S +E +G ++ +Y+++
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGR-LDDALSFFSEMETKGIKANVFTYNSL 306
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ GR +G ++L +M T+ P++V + A + +L K+G + EA ++ E + +G
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG- 365
Query: 363 FVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
P YN L+ GLC D N + +M K GC + TY IL++G C+
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK------GCDPDIWTYNILINGFCKAK 419
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ + R+ +M +R TY+ LI+G C K A +EM+SQ P I ++
Sbjct: 420 QVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYA 479
Query: 478 SLVASVCCNTADLNVCRKTLEQLSSC 503
L+ +C N +L L+Q+ C
Sbjct: 480 ILLDGLCDN-GELEEALGILDQMHKC 504
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 186/415 (44%), Gaps = 8/415 (1%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ L +R++E ++I +M + C+ + + ++G A+ L + +
Sbjct: 200 TIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR 259
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
++ ++ + K+ +L+ A + F +K+ + + N L+ C R D
Sbjct: 260 KIKPHVVTYTIIIDNLCKDGRLDDA-LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
+ ++M + P+ ++ L+ L + +L EA L M R G + + Y
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR----GIEPNTITYN 374
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L++ LC+ ++ +A Q+++ ++ KG P + I + + ++ L + +
Sbjct: 375 SLIYGLCNDKRLDEANQMMDLMVSKGCD-PDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG I +YS + +++ KV EM ++G P ++ Y L L +G ++E
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEE 493
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
AL ++++ M K + +YNI++ G+C+A A + + G + ++Y I+
Sbjct: 494 ALGILDQ-MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK-GVKRDIQSYNIM 551
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ GLC+ EA + +M Y P TYN LIR +V +EEM
Sbjct: 552 LSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 169/382 (44%), Gaps = 43/382 (11%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+++ +C+ + AL + ++M+ + P +Y I++ LC D RL++A S F +
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA----LSFFSEM 291
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
KG ++ Y +L+ + C G+ D Q+L ++ + + + +G+
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E AK L NE + RG P+ +Y+++ L N+ R+ E ++++D M +KG P + Y
Sbjct: 352 TE-AKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K VD+ + + + ++G TV Y+ L++G C + VA ++M Q
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTV-TYSTLIQGFCQSRKLIVAKKVFQEMVSQ 469
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEML-----------------------IRS 433
G TY IL+DGLC +G EA +L++M +
Sbjct: 470 -GVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDD 528
Query: 434 YWPC------------VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
W +++YN+++ GLC EA +M PD +++L+
Sbjct: 529 AWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIR 588
Query: 482 SVCCNTADLNVCRKTLEQLSSC 503
+ D+ + +E++ C
Sbjct: 589 AH-LRGNDITTSVQLIEEMKRC 609
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + K+ A ++ E + N Y S+I L R+ E
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITR--GIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C+ + I + +A Q+++ + LF+ +S + T +++TL++
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL A +F + V I + +L+D LC + AL + +M D
Sbjct: 451 CQSRKLIVAKKVF-QEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+I++ G+CN ++++A +S+F + KG DI Y +L LC + + +A
Sbjct: 510 IGIYNIIIHGMCNANKVDDA----WSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ G + P + + G DI + LI E + R G S AS + +D
Sbjct: 566 ALFRKMKEDGYE-PDGCTYNTLIRAHLRGNDITTSVQLIEE-MKRCGFSSDASTVKIVMD 623
Query: 306 LYNEGRI 312
+ + G +
Sbjct: 624 MLSSGEL 630
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y+ +L + D D+A+ + + M++ +PTV +N L GL V+ L K
Sbjct: 58 YKERLRSGLVDIKKDDAVALFQS-MLRSRPLPTVIDFNRLF-GLLARTKQYDLVLALCKQ 115
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ G + T I+++ CR + A + ++ Y P T+N L+ GLC G+
Sbjct: 116 MELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGR 175
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EAV ++ M+ +PD+ +++V +C
Sbjct: 176 VFEAVELVDCMVLSQHVPDLITLNTIVNGLC 206
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 1 MSVRWPRLLTPTY--LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPV-YASMIGILSE 57
MS+R T TY L Q + + + A K+F+E + H G + YA ++ L +
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV---HPGIMTYAILLDGLCD 487
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+ + E ++DQM E ++ I A ++++A SLF +L QS
Sbjct: 488 NGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547
Query: 118 FNTLLKEMVKESKLEAAHILF 138
+N +L + K S L A LF
Sbjct: 548 YNIMLSGLCKRSSLSEADALF 568
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 198/469 (42%), Gaps = 83/469 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ K P AL +F+ EK ++H+ P Y+S+I L+ S R ++ ++ ++ +
Sbjct: 56 VKEVKDPCEALALFENYHEK--GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIR 113
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C +++F I+ Y +A + + + LF + FNC F TL
Sbjct: 114 CNETLFVALIQHYGKAHLVEKGIELFHQMPSFNC------FRTL---------------- 151
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
QS N+L++ L C + A +FQ+ G P+ SY+I++KG
Sbjct: 152 --------------QSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWI 197
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+A +L M +KG +V Y + L LC +G++ A+ + + + KG
Sbjct: 198 KKGGWEQACNLFDEML----EKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHH 253
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P+ +Y+ + G+ E K
Sbjct: 254 ------------------------------------PNAVTYALLMEGWCFIGKYKEAKK 277
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M G V Y + L K G +DE +E + EM K P V YNIL+ L
Sbjct: 278 LMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDE-MESLLNEMKKRRLKPDVVTYNILVNYL 336
Query: 378 CDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G A L KM QVG C N TY +++DG C G F A ++L ML+ ++P
Sbjct: 337 CKEGKVGDAYKVLVKM--QVGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYP 394
Query: 437 CVETYNVLIRGLCSIGKQYEAVMW-LEEMISQAKLPDISVWSSLVASVC 484
++T+ L+ GL + V + LEEM + D W L+ VC
Sbjct: 395 HLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRILIMDVC 443
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D + A + +A G P+ SY+ M +G + + DEM KG PS+V
Sbjct: 163 DCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVV 222
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L L + G +D AL + + KG P Y +L++G C G A +
Sbjct: 223 TYNSXLGVLCRKGEMDTALCLFKNMTEKGHH-PNAVTYALLMEGWCFIGKYKEAKKLMFD 281
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M GC YG+L+ L + G E +L EM R P V TYN+L+ LC G
Sbjct: 282 MEFH-GCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEG 340
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
K +A L +M P+ + + ++ CN D + K L +
Sbjct: 341 KVGDAYKVLVKMQVGGCDPNAATYRMMIDGY-CNAGDFDGAMKILNAM 387
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 16/457 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF-KNL 106
Y +++ LS+++ + + ++ M D + +R GQ EA+ + ++
Sbjct: 123 YNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDM 181
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++NTL+ + +++AA L G V+ + + N +++ LC+ R
Sbjct: 182 RGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGG-VRPSLVTFNTVVNGLCKAGR 240
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F EM +G PD SY+ L+ G C L+EA ++F ++QKG D+V
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA----LAVFAEMAQKGVVPDVV 296
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG--EDIEGAKSLI 284
+ +L+ A+C G ++ A+ ++ ++ +GL+ + + C +G +D A +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E I+ PS+ Y+ + GR+ E +++ EM KG P +V Y L+ K
Sbjct: 357 RECRIQ---PSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G D A E + +M+K VP Y+ L++GLC+ A +KM Q+G +
Sbjct: 414 GDTDSAFE-LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM-LQLGLQPDEF 471
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+DG C++G +A + +EM+ + P V TY+VLI GL + EA L ++
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ +PD + +L+ CC TA+ L+ S
Sbjct: 532 YYEDPVPDNIKYEALMH--CCRTAEFKSVVALLKGFS 566
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 153/306 (50%), Gaps = 11/306 (3%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P +Y+ ++ L +D L A LL SM + G ++ Y L+ ALC +G+
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASML----RDGVAPNVYTYNILVRALCARGQ 169
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-PSLAS 298
++A+ ++ +R AP + + C GE ++ A+ L+ + GG+ PSL +
Sbjct: 170 REEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGE-VDAAERLVG-VMREGGVRPSLVT 227
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++ + L GR+ + K+ DEM +G P V Y ++ K G + EAL V E
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG VP V + L+ +C AGN AV + +M ++ G N T+ L+DG CR+G
Sbjct: 288 QKGV-VPDVVTFTSLIHAMCRAGNLERAVALVGQM-RERGLRMNEFTFTALIDGFCRNGF 345
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A ++EM P V YNVLI G C +G+ EA + EM ++ PD+ +S+
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405
Query: 479 LVASVC 484
+++ C
Sbjct: 406 ILSGYC 411
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 200/471 (42%), Gaps = 67/471 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++ R+ + +++ D+M + + T + Y +AG L+EA+++F +
Sbjct: 227 TFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEM 286
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---------------------------- 138
+Q V +F +L+ M + LE A L
Sbjct: 287 AQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFL 346
Query: 139 ---------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+R C ++ + N+L++ C+ R D A + EM+ +G PD +Y
Sbjct: 347 DDALLAMKEMREC---RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTY 403
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ G C + A L M +KG D + Y +L+ LC++ ++ DA ++ E
Sbjct: 404 STILSGYCKIGDTDSAFELNRKML----KKGVVPDAITYSSLIRGLCEERRLGDACELFE 459
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
K+L+ GL+ + + C +G +++ A SL +E + +G +P + +YS + L
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEG-NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
R E ++L ++ + P + YEA L + + +++ +KG +V
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDNIKYEA-LMHCCRTAEFKSVVALLKGFSMKGLMNQADKV 577
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y +L + K +G Y +L+ G CR G ++A +++
Sbjct: 578 YQSMLD------------RHWK---------LDGSVYSVLIHGHCRGGNIMKALSFHKQL 616
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
L + P + L+RGL G EA ++E+++ L D +L+
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 191/452 (42%), Gaps = 23/452 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + + + ++ M+ F T + +AG++ +A +F
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF 248
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ S+NTL+ K L A +F V + + L+ +C+
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD-VVTFTSLIHAMCR 307
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSG 222
+ A+ + +M +G + ++ L+ G C + L++A + M RI
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS--- 364
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+V Y L+ C G++ +A +++ ++ KG+K I C G D + A
Sbjct: 365 --VVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG-DTDSAFE 421
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + L +G +P +YS++ L E R+ + ++ ++M G P Y +
Sbjct: 422 LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHC 481
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ------ 396
K+G V +AL + +EM+K +P V Y++L+ GL + + A L K+ +
Sbjct: 482 KEGNVQKALS-LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540
Query: 397 ------VGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ C E + L+ G G +A +V + ML R + Y+VLI G
Sbjct: 541 IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH 600
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C G +A+ + ++++ P+ + SLV
Sbjct: 601 CRGGNIMKALSFHKQLLRCGFSPNSTSTISLV 632
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 203/439 (46%), Gaps = 18/439 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L ++ E++ +MK E F+ I + A +++EA+ L+K +
Sbjct: 83 TYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 142
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLC 162
+C S + L+ + +E ++ A+ LF +R W K + + L+D C
Sbjct: 143 LTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW--KPDVVTYTALIDGFC 200
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ + M+ + C P+ +Y L+ GLC L++A L F R++ KG
Sbjct: 201 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL----FRRMTSKGCV 256
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V Y TL+ LC K+ A +++++ A + + C G IE AK
Sbjct: 257 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR-IEEAKQ 315
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAAL 341
L E + +P +Y+ + N R+ E +L+ M+T G P +V Y +A
Sbjct: 316 LFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 375
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ EA E I+E M+ P Y+ L+ GLC AG A+ LK + K
Sbjct: 376 SRAKRFVEAAEFIQE-MIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----- 429
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY I+++GLC R EA +LEEM+ + P V T+N +I LC +G EA L
Sbjct: 430 DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489
Query: 462 EEMISQAKLPDISVWSSLV 480
M + P + +++L+
Sbjct: 490 VAMAAHGLEPGMVTYTTLL 508
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 204/467 (43%), Gaps = 52/467 (11%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLN 97
PN R Y ++ L ++ ++ EV+ +M+ D V ++T I + + G+++
Sbjct: 7 PNER----TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62
Query: 98 EAVSLFKNLSQFN-----CVNWTQSFNTLLK--------EMVKESKL---EAAHILFLRS 141
A + + + + V +T + L + EMV+E KL E F
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
GW C R+ D AL +++E+ C D S L+ GLC +RR
Sbjct: 123 ITGW----------------CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERR 166
Query: 202 LNEATHLLYSMFWRISQKGSG---EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK- 257
+ EA Y +F + + G D+V Y L+ C G ++ AM++L + +G K
Sbjct: 167 IGEA----YELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLG--VMEGRKC 220
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + L D++ A L +G +P++ +Y+ + L ++
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++DEM V Y A L + G ++EA ++ +E M + +P Y L++G
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE-MAAKSCLPDRITYTCLVRGF 339
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C+A A L+ M G + TY I+V G R RF+EA+ ++EM+ R+ P
Sbjct: 340 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 399
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI GLC G+ A+ E++ PD+ ++ ++ +C
Sbjct: 400 AVTYSSLIDGLCKAGRVNHAM----EVLKNVDKPDVVTYTIVIEGLC 442
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 202/438 (46%), Gaps = 17/438 (3%)
Query: 27 ALKIFKEAKEKYPN-YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
A ++F+E + + ++ + Y ++I +S + + +++ M+G C +++
Sbjct: 170 AYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSS 229
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ +AG L++A+ LF+ ++ CV ++ TL+ + K++AA +L +
Sbjct: 230 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL-MDEMTAT 288
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N L+D C+ R + A +F+EM + C PDR +Y L++G CN RL EA
Sbjct: 289 CCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL +M + G D+V Y ++ + +A + +++++ + + AP +
Sbjct: 349 RFLLENM---KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV-APNA---- 400
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ DG G + E L P + +Y+ + L R E +L+EM K
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
PS+ + + + AL + G +DEA +++ G P + Y LL+G G +
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG-LEPGMVTYTTLLEGFSRTGRMEI 519
Query: 386 A---VMYLKKMSKQVGCVAN---GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A +++ +K+ AN + + L+ GLC+ +A V+EE+ R P E
Sbjct: 520 AYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579
Query: 440 TYNVLIRGLCSIGKQYEA 457
++ GL G+ EA
Sbjct: 580 DCLAIVDGLLRAGRTEEA 597
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 196/455 (43%), Gaps = 23/455 (5%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM--KGDSCECKDSVFA 84
ALK++KE + R + +++I L RI E E+ +M + D D V
Sbjct: 135 ALKLYKEILTS--SCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTY 192
Query: 85 TA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
TA I + ++G L +A+ + + CV ++++LL + K L+ A LF R
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + + L+ LC + D A + EM C D SY+ L+ G C R+
Sbjct: 253 KGCVPN-VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIE 311
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA L F ++ K D + Y L+ C+ ++++A +LE + P
Sbjct: 312 EAKQL----FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ I + + + A I E + R P+ +YS++ L GR+ +VL +
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD 427
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
P +V Y + L +EAL ++EE MV P+V +N ++ LC G+
Sbjct: 428 K----PDVVTYTIVIEGLCGTDRTEEALTLLEE-MVNKRVEPSVGTFNSVIGALCRLGDM 482
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV----- 438
A L M+ G TY L++G R GR A + E M ++
Sbjct: 483 DEAWKLLVAMAAH-GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLV 541
Query: 439 --ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ ++ LIRGLC + +A+ +EE+ S+ P
Sbjct: 542 PEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 576
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L ++R E ++++M E F + I R G ++EA L +
Sbjct: 433 TYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 492
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRI---QSLNLLMDV 160
+ ++ TLL+ + ++E A+ LF R + + Q+ + L+
Sbjct: 493 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRG 552
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
LC+ R D A+ V +E+ + C P E ++ GL R EA L+ S+
Sbjct: 553 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 201/434 (46%), Gaps = 10/434 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +I + ++ D+M E ++T I + G A+ L K +
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++NT++ + K+ +L + F + + + + ++ C R
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKD-RLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F++M + P++ ++ IL+ GLC R ++EA + +F +++KG D+
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEA----WLVFETMTEKGLEPDVY 186
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLIN 285
Y L+ C + ++ +A ++ + RKG AP R + I + C G I+ AK L+
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGC-APNVRSYNILINGHCKSGR-IDEAKGLLA 244
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + P + +YS + GR E ++L EM + G P+L+ Y L L K G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+DEA E+++ M + P + +Y IL++G+C G A + + G T
Sbjct: 305 HLDEAFELLKA-MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK-GIQPTVVT 362
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y +++ GL + G EA + EM + P TYNV+I+G G AV +EEM+
Sbjct: 363 YTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMV 422
Query: 466 SQAKLPDISVWSSL 479
+ D S + L
Sbjct: 423 GKGFSADSSTFRML 436
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 200/439 (45%), Gaps = 45/439 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + + K + AL++ K+ +EK + N Y ++I L + +TE
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEK--GCKPNVVAYNTIIDSLCKDRLVTEAM 100
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M + +++ + + G++NEA SLFK + + N + +F L+ +
Sbjct: 101 DFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL 160
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K+ + A ++F + ++ + + N L+D C + D A +F MD +GC P+
Sbjct: 161 CKKRMISEAWLVF-ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPN 219
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+IL+ G C R++EA LL M S K DI Y TL+ C G+ Q+A
Sbjct: 220 VRSYNILINGHCKSGRIDEAKGLLAEM----SHKSLTPDIFTYSTLMRGFCQVGRPQEAQ 275
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L+++ GL +P+L +YS +
Sbjct: 276 ELLKEMCSYGL------------------------------------LPNLITYSIVLDG 299
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G + E ++L M+ P++ +Y + + G ++ A E+ VKG P
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG-IQP 358
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
TV Y +++ GL G S A ++M+ GC+ N TY +++ G R+G A R+
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFREMAVN-GCLPNSCTYNVIIQGFLRNGDTPNAVRL 417
Query: 426 LEEMLIRSYWPCVETYNVL 444
+EEM+ + + T+ +L
Sbjct: 418 IEEMVGKGFSADSSTFRML 436
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P +++ L+ GLC+ ++ +A L F + + G D++ Y T++ LC G
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKL----FDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+Q+L+K+ KG K + I C D E A +E + G P + +YS
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTE-AMDFFSEMVKEGIPPDVFTYS 119
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ N GR+ E + +M + P+ V + + L K M+ EA V E K
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P V YN L+ G C A M ++ GC N +Y IL++G C+ GR
Sbjct: 180 G-LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK-GCAPNVRSYNILINGHCKSGRID 237
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA +L EM +S P + TY+ L+RG C +G+ EA L+EM S LP++ +S ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297
Query: 481 ASVC 484
+C
Sbjct: 298 DGLC 301
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 184/413 (44%), Gaps = 8/413 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T + ++ +AV LF + + +++T++ + K A + L+
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA-LQLLKK 70
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + + N ++D LC+ R A+ F EM +G PD +Y ++ G CN R
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+NEAT S+F ++ ++ + V + L+ LC + I +A + E + KGL+
Sbjct: 131 VNEAT----SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C+ + ++ A+ L N +G P++ SY+ + GRI E +L E
Sbjct: 187 TYNALVDGYCSRSQ-MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P + Y + + G EA E+++E M +P + Y+I+L GLC G
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE-MCSYGLLPNLITYSIVLDGLCKHG 304
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A LK M ++ N Y IL++G+C G+ A + + ++ P V TY
Sbjct: 305 HLDEAFELLKAM-QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
V+I GL G EA EM LP+ ++ ++ N N R
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 358 MVKGTFVPTVRVYNILLKGLC------DA-----------------------------GN 382
M K PT+ +N LL GLC DA GN
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+ +A+ LKKM ++ GC N Y ++D LC+D EA EM+ P V TY+
Sbjct: 61 TTMALQLLKKMEEK-GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ G C++G+ EA ++M+ + +P+ ++ L+ +C
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 199/404 (49%), Gaps = 12/404 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+T I + G+++EAV+L + + + NTL+ + + ++ A +L R
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
YG E + +++ +C+ + LAL +F++M+ + Y I++ LC D
Sbjct: 202 KYGCEANE--ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPK 260
L++A S+F + KG D+V Y +++ LC+ G+ D ++L E I R +
Sbjct: 260 LDDA----LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVV 315
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ ID+ +G+ +E AK L NE + RG P +YS++ E R+ E +++LD
Sbjct: 316 TFSALIDVF-VKEGKLLE-AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M +KG P++V Y + + K VD + + E KG TV YN L++G C +
Sbjct: 374 LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV-TYNTLVQGFCQS 432
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G VA ++M + G + TYGIL+DGLC +G +A + E+M +
Sbjct: 433 GKLNVAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI 491
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN++I G+C+ K +A + + PD+ ++ ++ +C
Sbjct: 492 YNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 193/400 (48%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + R +L A S+ +F T +F+TL+ E ++ A L R E
Sbjct: 111 INCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV---E 167
Query: 147 VKSR--IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+K R + ++N L++ LC R AL + M GC + +Y ++ +C
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN--- 224
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
T L +F ++ ++ +V Y ++ +LC G + DA+ + ++ KG+KA
Sbjct: 225 -TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYS 283
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I CNDG +GAK ++ E + R IP++ ++SA+ EG+++E ++ +EM
Sbjct: 284 SIIGGLCNDGRWDDGAK-MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P + Y + + K+ + EA ++++ + KG P + Y+IL+ C A
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC-EPNIVTYSILINSYCKAKRVD 401
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ ++S + G VA+ TY LV G C+ G+ A + +EM+ R P V TY +L
Sbjct: 402 NGMRLFCEISSK-GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC G+ +A+ E+M + I +++ ++ +C
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMC 500
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 200/472 (42%), Gaps = 35/472 (7%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N ++++I R++E ++D+M T I G++ EA+
Sbjct: 135 FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEAL 194
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ C ++ +L M K A LF R +K+ + ++++D
Sbjct: 195 VLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLF-RKMEERSIKASVVQYSIVIDS 253
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR----- 215
LC+ D AL +F EM+ +G D +Y ++ GLCND R ++ +L M R
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313
Query: 216 --------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ +G D + Y +L+ C + ++ +A Q+L+
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ KG + P + I + + ++ L E +G + +Y+ +
Sbjct: 374 LMVSKGCE-PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G++ ++ EM ++G PS+V Y L L +G + +ALE+ E+ M K + + +
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEK-MQKSRMILGIGI 491
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YNI++ G+C+A A +S + G + TY +++ GLC+ G EA + +M
Sbjct: 492 YNIIIHGMCNASKVDDAWSLFCSLSVK-GVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM 550
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
P TYN+LIR +V +EEM + D S +V
Sbjct: 551 KEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVV 602
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 195/430 (45%), Gaps = 49/430 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRI 151
++NEA+ LF+++ Q + F+ L + + + + L L C + ++ +
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYD----LVLGFCKEMDLNGIEHNM 104
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++N++++ C+ R+ A V G P+ ++ L+ G C + R++EA L+
Sbjct: 105 YTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALV-- 162
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------PKSRRH- 264
R+ + ++V TL+ LC +G++ +A+ +++++++ G +A P R
Sbjct: 163 --DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMC 220
Query: 265 -------RIDL---------------------CPCNDGEDIEGAKSLINEALIRGGIPSL 296
+DL C DG +++ A SL NE ++G +
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDG-NLDDALSLFNEMEMKGIKADV 279
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS++ L N+GR +G K+L EM + P++V + A + K+G + EA E+ E
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+ +G P Y+ L+ G C A L M + GC N TY IL++ C+
Sbjct: 340 MVARG-IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSK-GCEPNIVTYSILINSYCKA 397
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R R+ E+ + TYN L++G C GK A +EM+S+ P + +
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457
Query: 477 SSLVASVCCN 486
L+ +C N
Sbjct: 458 GILLDGLCDN 467
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 159/336 (47%), Gaps = 10/336 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E + K + + Y+S+IG L R + +++ +M G + F+
Sbjct: 263 ALSLFNEMEMK--GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSAL 320
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
I + + G+L EA L+ + T ++++L+ KE++L EA +L L G
Sbjct: 321 IDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC 380
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
E I + ++L++ C+ +R D + +F E+ +G D +Y+ L++G C +LN A
Sbjct: 381 E--PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVA 438
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M R G +V Y LL LCD G++Q A++I EK+ + + +
Sbjct: 439 KELFQEMVSR----GVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
I CN ++ A SL ++G P + +Y+ M L +G + E D + +M+
Sbjct: 495 IIHGMCN-ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED 553
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
G PS Y + A V ++E+IEE ++G
Sbjct: 554 GCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 151/319 (47%), Gaps = 16/319 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T + L + K+ L A +++ E A+ P+ Y+S+I + NR+ E
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT----ITYSSLIDGFCKENRLGE 367
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+++D M CE ++ I +Y +A +++ + LF +S V T ++NTL++
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ KL A LF + V + + +L+D LC AL +F++M
Sbjct: 428 GFCQSGKLNVAKELF-QEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
Y+I++ G+CN ++++A +S+F +S KG D++ Y ++ LC +G + +
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDA----WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A + K+ G AP + I + G + + LI E +R G + AS M
Sbjct: 543 ADMLFRKMKEDGC-APSDCTYNILIRAHLGGSGVISSVELIEEMKMR-GFAADASTIKMV 600
Query: 304 IDLYNEGRIVEGDKVLDEM 322
+ + ++GR+ DK +M
Sbjct: 601 VVMLSDGRL---DKTFLDM 616
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y+ +L D V+EA+++ E M++ +P++ ++ L + + + + K
Sbjct: 35 VSYKERLRNGIVDIKVNEAIDLFES-MIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCK 93
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M G N T I+++ CR + L A V+ L + P T++ LI G C
Sbjct: 94 EMDLN-GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLE 152
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ EAV ++ M+ P++ ++L+ +C
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLC 185
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 203/451 (45%), Gaps = 51/451 (11%)
Query: 9 LTPTYLSQIIKKQ--KSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
TP + +++K+ P AL+ FK E +P+Y H+ + I I +
Sbjct: 76 FTPELVDKVLKRLWFHGP-KALQFFKHL-EYHPSYAHSASSFDHAIDIAGRMRDYKTVWA 133
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ +M+ FA + AG+ + A+ +F ++ + C SFNT+L +
Sbjct: 134 LVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILC 193
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K ++E A+ + G + K+ + S N++ + C +R+ AL V +EM +G P
Sbjct: 194 KSKRVEMAYNNLFKVLRG-KFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTI 252
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+IL+KG +L EA + F ++ ++ D+V Y T++ G+I+ A +
Sbjct: 253 TTYNILLKGYFRAGQLKEA----WEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARK 308
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ NE + G +PS A+Y+AM L
Sbjct: 309 VF------------------------------------NEMVGEGILPSTATYNAMIQVL 332
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+ + + +EM KG+ P+L Y + LF G +D+A+E IE G P
Sbjct: 333 CKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGC-EPN 391
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---RDGRFLEAS 423
V+ YN+ ++ CDAG+ + +KM + G + N +TY +L+ + + + A
Sbjct: 392 VQTYNVAIRYFCDAGDVEKGLSMFEKMGQ--GSLPNLDTYNVLISAMFVRKKSEDLVVAG 449
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++L EM+ R + P T+N ++ GL G Q
Sbjct: 450 KLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQ 480
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 127/321 (39%), Gaps = 43/321 (13%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P +++ I+ + + + A + SM + G +D+ + T+L LC +++
Sbjct: 145 PSSKTFAIIAERFVAAGKPDRAIKVFLSM----REHGCPQDLHSFNTILDILCKSKRVEM 200
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A L K+LR KA + SY+ +A
Sbjct: 201 AYNNLFKVLRGKFKA------------------------------------DVVSYNIIA 224
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
R + +VL EM +G P++ Y L F+ G + EA E + +
Sbjct: 225 NGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVE 284
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+ V Y ++ G G A +M + G + + TY ++ LC+ A
Sbjct: 285 IDVV-TYTTMVHGFGVVGEIKRARKVFNEMVGE-GILPSTATYNAMIQVLCKKDSVENAV 342
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ EEM+ + Y P + TYNV+IRGL G +A+ ++E M + P++ ++ +
Sbjct: 343 LMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAI-RY 401
Query: 484 CCNTADLNVCRKTLEQLSSCS 504
C+ D+ E++ S
Sbjct: 402 FCDAGDVEKGLSMFEKMGQGS 422
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 297 ASYSAMAIDLYNEGRIVEGDKV---LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
AS AID+ GR+ + V + MR + PS + G D A++V
Sbjct: 112 ASSFDHAIDI--AGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKV 169
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
G + +N +L LC + +A L K+ + A+ +Y I+ +G
Sbjct: 170 FLSMREHGC-PQDLHSFNTILDILCKSKRVEMAYNNLFKVLRG-KFKADVVSYNIIANGW 227
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C R +A VL+EM+ R P + TYN+L++G G+ EA + +M + D+
Sbjct: 228 CLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDV 287
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQL 500
++++V ++ RK ++
Sbjct: 288 VTYTTMVHGFGV-VGEIKRARKVFNEM 313
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 19/460 (4%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL AL FK ++H + MI L+ ++ ++ ++ QMK C + +F
Sbjct: 57 PL-ALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF 114
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ I Y + G AV +F + +F C + +N +L ++ E++++ ++++ R
Sbjct: 115 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY-RDMK 173
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + + N+L+ LC+ + D A + EM +GC PD SY ++ +C +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 204 EATHLLYSMFWRISQKGSGEDIV-IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
E L E +V +Y L+ LC + + A +++ +++ KG+
Sbjct: 234 EGRELAERF----------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN G+ IE A S + + L RG P++ + S++ + G + + ++M
Sbjct: 284 YSTLINVLCNSGQ-IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 323 -RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
R G P++V Y + G + +A+ V M + P +R Y L+ G G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF-SHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ AV KM GC N Y +V+ LCR +F EA ++E M + P V T+
Sbjct: 402 SLDGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLV 480
N I+GLC G+ A +M Q + P+I ++ L+
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 206/484 (42%), Gaps = 54/484 (11%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQ 95
K + N Y ++ L ++N++ K+++ +M C C D+V + T I + G
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC-CPDAVSYTTVISSMCEVGL 231
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+ E L + V +N L+ + KE + A L +R + + S +
Sbjct: 232 VKEGRELAERFEPVVSV-----YNALINGLCKEHDYKGAFEL-MREMVEKGISPNVISYS 285
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES--------------------------- 188
L++VLC + +LA +M +GC+P+ +
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 189 ---------YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Y+ L++G C+ + +A S+F + + G +I Y +L+ +G
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAV----SVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ A+ I K+L G + C + E A+SLI PS+ ++
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE-AESLIEIMSKENCAPSVPTF 460
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWP-SLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+A L + GR+ +KV +M + P ++V Y L L K ++EA + E
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
++G + YN LL G C+AG +A+ + KM G + T +++ C+ G+
Sbjct: 521 MRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGK 578
Query: 419 FLEASRVLEEMLI--RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
A+++L+ + R + P V +Y +I GLC + + V+ LE MIS +P I+ W
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 477 SSLV 480
S L+
Sbjct: 639 SVLI 642
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 19/312 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ I + V M+ C + + I +A+ G L+ AV ++
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR------IQSLNLL 157
+ C + +++ + + SK + A L E+ S+ + + N
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI-------EIMSKENCAPSVPTFNAF 463
Query: 158 MDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+ LC R D A VF++M+ Q C P+ +Y+ L+ GL R+ EA L +F R
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ S Y TLL C+ G A+Q++ K++ G + + I L C G+
Sbjct: 524 VEWSSST----YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 277 IEGAKSL-INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A+ L + R P + SY+ + L +G +L+ M + G PS+ +
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 336 AKLAALFKDGMV 347
+ D +V
Sbjct: 640 VLINCFILDDIV 651
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG------TFVPTVRVYNILLKGLCDA 380
F + + +E + L DG VD ++++ ++G F+ + VY + GL +
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQV--GLAE- 128
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
AV + Y K+ GC + + Y ++D L + R V +M + P V T
Sbjct: 129 --RAVEMFY---RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YNVL++ LC K A L EM ++ PD ++++++S+C
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 226/477 (47%), Gaps = 15/477 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T T L + + + A+++F E +K + Y +I L ++ +
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK--GLLGDAKTYGILINGLCKARKTGLAI 1071
Query: 66 EVIDQMKGDSCECKDSVFATA--IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++ ++MKG+ CK VF I + G EA+ +F + + +++L+
Sbjct: 1072 KLHEKMKGN---CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 1128
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + +L+ A + F + G + + + + N L+ L + M +G
Sbjct: 1129 GLCRFGRLKEA-LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD ++ IL+ GLC + ++ EA +L M KG DI+ Y TL+ LC G+++D
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELM----RHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A ++ E + +G+K + + C D + I+ A E +G PS +Y+ +
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKD-QKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L GR+ K+ EM+T G + L Y L L K+G ++EA+++ + + K
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS-IKKTEH 1361
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + V++ILL G+C AG A ++SK G + Y IL++GLC G EA
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN-GLEPDTIAYNILINGLCNKGMLSEAV 1420
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++L +M + P T+NV+I+ L + +EA+ LEEM ++ PD +V S L+
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 191/428 (44%), Gaps = 15/428 (3%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
N I + ++ D+M + I +A + A+ L + + + NC ++
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTY 1088
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
++ + K+ A +F G + + + LMD LC+ R AL F+EM+
Sbjct: 1089 GMIIDALCKDGMTTEALDMF-SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+G D +Y+ L+ GL E T L M R G D + L+ LC +
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR----GFSPDAFTFTILIDGLCKE 1203
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPS 295
GK+ +A QILE + KG K P + LC ED A L RG +
Sbjct: 1204 GKVGEAQQILELMRHKG-KEPDILTYNTLMNGLCLVGQLED---ATKLFESLADRGIKLN 1259
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ SY+ + + +I E + +EMR KG PS V Y + AL + G V A ++
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E G F+ + Y +LL GLC G+ A M L + K+ N E + IL+DG+CR
Sbjct: 1320 EMQTCGQFL-KLSTYCVLLDGLCKNGHLEEA-MDLFQSIKKTEHKPNIEVFSILLDGMCR 1377
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G+ EA + +E+ P YN+LI GLC+ G EAV L +M + LPD
Sbjct: 1378 AGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSIT 1437
Query: 476 WSSLVASV 483
++ ++ ++
Sbjct: 1438 FNVIIQNL 1445
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 182/404 (45%), Gaps = 12/404 (2%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+AV LF +++ + +++ L+ + K K A + L K + + ++
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA--IKLHEKMKGNCKGDVFTYGMI 1091
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+D LC+ + AL +F EM G PD Y LM GLC RL EA F +
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF----FKEME 1147
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGED 276
+G D+ Y +L+ L G ++ L ++ +G +P + I + C +G+
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF-SPDAFTFTILIDGLCKEGK- 1205
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A+ ++ +G P + +Y+ + L G++ + K+ + + +G ++ Y
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ KD +DEA EE KG P+ YN L+ LC +G A +M +
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QT 1323
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G TY +L+DGLC++G EA + + + + P +E +++L+ G+C GK E
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A +E+ PD ++ L+ + CN L+ K L Q+
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGL-CNKGMLSEAVKLLWQM 1426
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 12/426 (2%)
Query: 81 SVFATAIRTYARAG--QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
S F +R R G +LN+A+ LF + T +FN LL + K ++
Sbjct: 910 SPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMY 969
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
R ++ + +LN+L+ C R VF +G PD + L+KG+
Sbjct: 970 -RKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWM 1028
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ + +A L F +++KG D Y L+ LC K A+++ EK ++ K
Sbjct: 1029 ENGIPDAVQL----FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEK-MKGNCKG 1083
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
I C DG E A + +E + G +P + YS++ L GR+ E +
Sbjct: 1084 DVFTYGMIIDALCKDGMTTE-ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
EM +G + Y + + L + G+ E + MV F P + IL+ GLC
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFL-NLMVDRGFSPDAFTFTILIDGLC 1201
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A L+ M + G + TY L++GLC G+ +A+++ E + R V
Sbjct: 1202 KEGKVGEAQQILELM-RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
+YN+LI G C K EA + EEM + P +++L+ ++ C + + +K
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL-CQSGRVRTAQKLFV 1319
Query: 499 QLSSCS 504
++ +C
Sbjct: 1320 EMQTCG 1325
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 201/400 (50%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R+ + + N+A++LF ++++ + F+ LL + K K EA LF R
Sbjct: 45 LRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLF-RHIEILG 103
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S + L+D C+C R LAL +M G P ++ L+ G C+ R+ EA
Sbjct: 104 ISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAM 163
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+ +I G ++VIY T++ +LC+ ++ A+ +L + + G++ + +
Sbjct: 164 ----SLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSL 219
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN-EGRIVEGDKVLDEMRT 324
+ G+ G + I ++R GI P + ++SAM ID++ EG+++E K DEM
Sbjct: 220 ITRLFHSGK--WGVSARILSDMMRMGIHPDVITFSAM-IDVFGKEGQLLEAKKQYDEMIQ 276
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P++V Y + + L G++DEA +V+ + KG F P YN L+ G C +
Sbjct: 277 RSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKG-FFPNAVTYNTLVNGYCKSKRVD 335
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ L MS G + TY L G C+ G+F A +VL M+ P + T+N+L
Sbjct: 336 DAMKILCVMSHD-GVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNML 394
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC GK +A++ LE++ + I ++ ++ +C
Sbjct: 395 LDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMC 434
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
L+L+V F G RE L GL + + N+A ++F +++ IV +
Sbjct: 25 LSLNVCNFGAFSGGSDYRER---LRSGL-HSIKFNDAL----TLFCDMAESRPLPSIVDF 76
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAP-KSRRHRID-LCPCNDGEDIEGAKSLINE 286
LL A+ K + + + I G+ S ID C C+ + A S + +
Sbjct: 77 SRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSR---LSLALSCLGK 133
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G PS+ ++ ++ + RI E ++D++ G+ P++V+Y + +L ++
Sbjct: 134 MMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQ 193
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VD AL+V+ M K P V YN L+ L +G V+ L M + +G + T+
Sbjct: 194 VDTALDVLNH-MEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMR-MGIHPDVITF 251
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++D ++G+ LEA + +EM+ RS P + TYN LI GLC G EA L M+S
Sbjct: 252 SAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVS 311
Query: 467 QAKLPDISVWSSLVASVC 484
+ P+ +++LV C
Sbjct: 312 KGFFPNAVTYNTLVNGYC 329
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 156/382 (40%), Gaps = 43/382 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S++ NRI E ++DQ+ G E ++ T I + Q++ A+ + ++
Sbjct: 146 FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME 205
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++N+L+ + K + + L + + + + ++DV + +
Sbjct: 206 KMGIRPDVITYNSLITRLFHSGKWGVSARI-LSDMMRMGIHPDVITFSAMIDVFGKEGQL 264
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM + P+ +Y+ L+ GLC L+EA +L M KG + V
Sbjct: 265 LEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV----SKGFFPNAVT 320
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ C ++ DAM+IL + G+ DG+
Sbjct: 321 YNTLVNGYCKSKRVDDAMKILCVMSHDGV----------------DGDTF---------- 354
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+Y+ + G+ +KVL M + G P + + L L + G +
Sbjct: 355 ----------TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKI 404
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++AL V E++ K V + YNI++KG+C A N YL G + TY
Sbjct: 405 EKAL-VKLEDLQKSETVVGIITYNIIIKGMCKA-NKVEDAWYLFCSLALKGVSPDVITYT 462
Query: 408 ILVDGLCRDGRFLEASRVLEEM 429
++ GL R +LEA + +M
Sbjct: 463 TMMIGLRRKRLWLEAHELYRKM 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
F +K +PN Y +++ +S R+ + +++ M D + + T + Y
Sbjct: 308 FMVSKGFFPN----AVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGY 363
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+AGQ N A + + + +FN LL + + K+E A ++ L E
Sbjct: 364 CQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKA-LVKLEDLQKSETVVG 422
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+++ +C+ + + A ++F + +G PD +Y +M GL R EA H LY
Sbjct: 423 IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEA-HELY 481
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI---------LVDGLCRDGRFLEASR 424
L + D VA+ LKK + + E GI L+D CR R A
Sbjct: 70 LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L +M+ + P + T+ L+ G C + + EA+ +++++ P++ ++++++ S+C
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189
Query: 485 CN 486
N
Sbjct: 190 EN 191
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 207/469 (44%), Gaps = 33/469 (7%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQM---KG-DSC-------------ECKDS 81
P +RH Y +M LS E + +I + KG DS C +
Sbjct: 95 PTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNF 154
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + Y +G +++A+ F+ + N LL +M+ S F
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTIWTFYSE 213
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ ++Q N+L++ C+ A +F E+ +G P S++ L+ GLC R
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+E L +M + D+ Y L+ LC +G++ A Q+ +++ ++GL
Sbjct: 274 LDEGFRLKKTM----EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL----- 324
Query: 262 RRHRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
R + I DG+ ++ A + ++ L G P L Y+ + L G + + K
Sbjct: 325 RPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++DEM+ G P + Y + K+G ++ A+E+ + +G + V + L+ G
Sbjct: 385 LVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTALISGF 443
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A L++M + G + TY +++DG C+ G ++L+EM I + P
Sbjct: 444 CRDGRVRDAERTLREMV-EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TYNVL+ GLC G+ A M LE M++ PD ++ L+ C N
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 221/474 (46%), Gaps = 48/474 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+A ++ L SN++ + ++++ +MK C D+++ I Y++A +A +
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +C+ ++ ++ + K + + A + L I + N++++ LC+ R+
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDA-VKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 130
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + +EM +G +PD +Y+ +KGLC R++EA L M D+V
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM-------PVTPDVV 183
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC G + A ++L+++ +G + C GE +E A L++
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE-VERAMGLLDS 242
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P++ +Y+++ L+ G I + + +L EM +GF P +V Y A + L K
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V +A V + MV+ P Y++L++ LC A+ +++ ++ + + Y
Sbjct: 303 VKKAKAVF-DRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ-IVDILLY 360
Query: 407 GILVDGLCRDGRFLEA----SRVLEE--------------------------------ML 430
+L+DGLC+ GRF EA S+VL+E ML
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R+ V T+N+L+ GLC + +A L M+ + +PD + +LV ++C
Sbjct: 421 ERNCCNVV-TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 473
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 190/411 (46%), Gaps = 12/411 (2%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
SC+ FA +R R+ QL +A L + + CV +N L+ K A
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
FL + + ++D LC+ R+ A+ + EM +GC P+ +Y+++++
Sbjct: 65 -FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC +R+L+EA +L M R G D+V Y + + LC ++ +A + L ++
Sbjct: 124 GLCEERKLDEAKKMLEEMAVR----GYFPDVVTYNSFIKGLCKCDRVDEARKFLARM--- 176
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
P + + D++ A ++++ RG P + +YS++ G +
Sbjct: 177 -PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVER 235
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+LD M G P++V Y + L AL + G + +A +++ EM + F P V YN +
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML-VEMERRGFTPDVVSYNACI 294
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC A A +M ++ GC N +Y +LV+ LC+ +A ++E+ +
Sbjct: 295 DGLCKAERVKKAKAVFDRMVER-GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ 353
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
+ Y VL+ GLC G+ EA +++ + PD+ ++ ++ S C
Sbjct: 354 IVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 404
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 45/304 (14%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ C PD ++ IL++GLC +L +A LL R+ + G D IY L+
Sbjct: 4 KSCQPDAFTFAILLRGLCRSNQLEKARQLL----GRMKEMGCVPDDAIYNALISGYSKAK 59
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
A + L ++++ N L P++ +Y
Sbjct: 60 DFGQAFKFLAEMVK-------------------------------NHCL-----PTVVTY 83
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L GR + K+LDEMR KG P++ Y + L ++ +DEA +++EE V
Sbjct: 84 TNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 143
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G F P V YN +KGLC A +L +M V +Y +++GLC+ G
Sbjct: 144 RGYF-PDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVV----SYTTVINGLCKSGDL 198
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
ASR+L++M R P V TY+ LI G C G+ A+ L+ M+ P++ ++SL
Sbjct: 199 DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258
Query: 480 VASV 483
+ ++
Sbjct: 259 LGAL 262
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P +++ + L ++ + ++L M+ G P +Y A ++ K +A +
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ E MVK +PTV Y ++ GLC AG + AV L +M + GC N TY ++V+GL
Sbjct: 68 LAE-MVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDK-GCSPNIYTYNVIVEGL 125
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C + + EA ++LEEM +R Y+P V TYN I+GLC + EA +L M PD+
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+++++ + C + DL+ + L+Q+++
Sbjct: 183 VSYTTVINGL-CKSGDLDSASRMLDQMTN 210
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P + L L + +++A +++ G VP +YN L+ G A
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGC-VPDDAIYNALISGYSKAK 59
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A +L +M K C+ TY +VDGLC+ GR +A ++L+EM + P + TY
Sbjct: 60 DFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY 118
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTAD 489
NV++ GLC K EA LEEM + PD+ ++S + +C C+ D
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 167
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 148/324 (45%), Gaps = 26/324 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE-- 63
P + + L + + K+K A+ + ++A+EKY + +Y ++ L + R E
Sbjct: 320 PNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV--DILLYTVLLDGLCKGGRFDEAC 377
Query: 64 --MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+V+D+ CE + + ++ + Q+++A+ + K + + NC N ++N L
Sbjct: 378 ALFSKVLDE---KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNIL 433
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ + + +L A + L + + + L+D +C+C +S AL +F+E G
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFV-TYGTLVDAMCKCGKSAAALELFEEAVKGG 492
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C PD +Y L+ GL ++ EA Y +F ++ D+ ++ ++ + G
Sbjct: 493 CVPDVVTYSALITGLVHENMAEEA----YLLFTKL-------DVALWNAMILGYAENGSG 541
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLC-PCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++ +++ ++ P +R ++ E + A+ L + A+ G P L +
Sbjct: 542 DLGLKLFVELIESDVE-PNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVAN 600
Query: 301 AMAIDLYNE-GRIVEGDKVLDEMR 323
+ ID++ + G + E ++ M+
Sbjct: 601 TL-IDVFAKCGDLEEARRIFYSMK 623
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 199/422 (47%), Gaps = 44/422 (10%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+PT + ++I Q PL A +IF A + PN+RHN Y +I S + + +++
Sbjct: 41 SPTRVQKLIASQSDPLLAKEIFDYASLQ-PNFRHNYSTYLILILKFGRSKHFSLLDDLLR 99
Query: 70 QMKGDSCE-CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++K +S + ++F+ I+ Y A ++A++ F + QFN T+ N +L +V
Sbjct: 100 RLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILV-- 157
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+H +LR A +F++ G +PD +S
Sbjct: 158 -----SHRNYLRP----------------------------AFDLFKDAHKHGVFPDTKS 184
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ILM+ C LN + Y++F ++ ++ DI YR L+ ALC + ++ A+ +
Sbjct: 185 YNILMRAFC----LNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLF 240
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
E +L KG P S + L + + A L+ ++G P + Y+ + +
Sbjct: 241 EDMLNKGF-VPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCR 299
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
EGR + KV+D+M+ G P+LV Y + L GM+DEA + +EE + KG F P
Sbjct: 300 EGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKG-FSPHFA 358
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
V + L+KG C+ G A L K S + + +T+ I+V +C ++ VLEE
Sbjct: 359 VIHALVKGFCNVGRIEEACGVLTK-SLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEE 417
Query: 429 ML 430
+L
Sbjct: 418 VL 419
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G DI A +L N+ R +P + SY + L + ++ + ++M KGF P
Sbjct: 193 CLNG-DISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPD 251
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
Y L +L + + EA +++ VKG P + YN ++ G C G + A +
Sbjct: 252 SFTYTTLLNSLCRKKKLREAYKLLCRMKVKGC-NPDIVHYNTVILGFCREGRAHDACKVI 310
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M GC+ N +Y LV+GLC G EA++ +EEML + + P + L++G C+
Sbjct: 311 DDMQAN-GCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCN 369
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ EA L + + + P W +V +C
Sbjct: 370 VGRIEEACGVLTKSLEHREAPHKDTWMIIVPQIC 403
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A L +A G P SY+ + G I + ++M + P + Y
Sbjct: 163 LRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRI 222
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ AL + V+ A+++ E+ + KG FVP Y LL LC A L +M K
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKG-FVPDSFTYTTLLNSLCRKKKLREAYKLLCRM-KV 280
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC + Y ++ G CR+GR +A +V+++M P + +Y L+ GLC +G E
Sbjct: 281 KGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDE 340
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A ++EEM+S+ P +V +LV C
Sbjct: 341 ATKYVEEMLSKGFSPHFAVIHALVKGFC 368
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS-- 149
R Q+N AV LF+++ V + ++ TLL + ++ KL A+ L R +VK
Sbjct: 229 RKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCR----MKVKGCN 284
Query: 150 -RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
I N ++ C+ R+ A V +M GC P+ SY L+ GLC+ L+EAT
Sbjct: 285 PDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKY 344
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI-- 266
+ M KG + L+ C+ G+I++A +L K L +AP I
Sbjct: 345 VEEML----SKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHR-EAPHKDTWMIIV 399
Query: 267 -DLCPCNDGEDIEGAKSLINEALIRG 291
+C +DG I+G + + I+G
Sbjct: 400 PQICEVDDGVKIDGVLEEVLKIEIKG 425
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A ++ ++ G F P + YNIL++ C G+ ++A KM K+ V + ++Y IL
Sbjct: 166 AFDLFKDAHKHGVF-PDTKSYNILMRAFCLNGDISIAYTLFNKMFKR-DVVPDIQSYRIL 223
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ LCR + A + E+ML + + P TY L+ LC K EA L M +
Sbjct: 224 MQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGC 283
Query: 470 LPDISVWSSLVASVCCNTADLNVCR 494
PDI +++++ C + C+
Sbjct: 284 NPDIVHYNTVILGFCREGRAHDACK 308
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+L Y K+ + + D+AL M++ P + N +L L N
Sbjct: 111 PTLFSYLIKIYG--EANLPDKALNTFYI-MLQFNIKPLTKHLNRILDILVSHRNYLRPAF 167
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L K + + G + ++Y IL+ C +G A + +M R P +++Y +L++ L
Sbjct: 168 DLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQAL 227
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C + AV E+M+++ +PD +++L+ S+C
Sbjct: 228 CRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLC 263
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 8/389 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L++A+S F + + T FN LL + K + L + + + +LN
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS-NQMDSFGIPPDVYTLN 106
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C R A V ++ G PD ++ L++GLC + ++ +A HL F +
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHL----FDK 162
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC G A+++L + + + I C D +
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A +L ++ + +G P + +Y+++ L N +L++M P +V++
Sbjct: 223 VTE-AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G + EA +V++ +++G P V YN L+ G C AV M
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G N +Y L++G C+ R +A+ + EEM + P TYN L+ GLC +G+
Sbjct: 341 N-GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQ 399
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ EM++ ++PD++ + L+ +C
Sbjct: 400 DAIALFHEMVAHGQIPDLATYRILLDYLC 428
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 204/447 (45%), Gaps = 10/447 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L +I + + D+M G+ + + T I + G N A+ L +++
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 198
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q NC + +++ + K+ ++ A LF + G + I + L+ LC
Sbjct: 199 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV-GQGISPDIFTYTSLIHSLCNLCE 257
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ +M PD + ++ LC + ++ EA ++ M R G ++V
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR----GVEPNVV 313
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C Q ++ +A+++ + ++ G AP + + + ++ A L E
Sbjct: 314 TYNALMDGHCLQSEMDEAVKVFDTMVHNGY-APNVISYNTLINGYCKIQRMDKATYLFEE 372
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ IP+ +Y+ + L + GR+ + + EM G P L Y L L K
Sbjct: 373 MCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 432
Query: 347 VDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+DEA+ +++ ++G+ + P +++Y I++ G+C AG A +S + G N T
Sbjct: 433 LDEAMALLKT--IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK-GLRPNVRT 489
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++GLCR G EA+++ EM P TYN + +GL + A+ L+EM+
Sbjct: 490 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Query: 466 SQAKLPDISVWSSLVASVCCNTADLNV 492
++ D+S + LV +C + D +V
Sbjct: 550 ARGFSADVSTTTLLVEMLCDDKLDQSV 576
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 186/421 (44%), Gaps = 8/421 (1%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ +A+ LF + ++ TL+ + K AA I LR
Sbjct: 138 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA-IRLLR 196
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + ++D LC+ R+ A ++F +M QG PD +Y L+ LCN
Sbjct: 197 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 256
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
T LL M I+ K D+VI+ T++ ALC +GKI +A +++ ++ +G++
Sbjct: 257 EWKHVTTLLNQM---INSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C E E K + + + G P++ SY+ + R+ + + +
Sbjct: 313 VTYNALMDGHCLQSEMDEAVK-VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 371
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P+ V Y + L G + +A+ + E + G +P + Y ILL LC
Sbjct: 372 EMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQ-IPDLATYRILLDYLCKK 430
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ A+ LK + + + Y I++DG+CR G A + + + P V T
Sbjct: 431 SHLDEAMALLKTIEGS-NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
Y ++I GLC G EA EM PD ++++ + N L + E L
Sbjct: 490 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Query: 501 S 501
+
Sbjct: 550 A 550
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
+ L+EA++L K + N Q + ++ M + +LEAA +F + ++ +
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF-SNLSSKGLRPNV 487
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ ++++ LC+ D A +F EMD GC PD +Y+ + +GL ++ A LL
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 547
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
M R G D+ L+ LCD Q QIL + ++
Sbjct: 548 MLAR----GFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 184/403 (45%), Gaps = 9/403 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F R YA AG L ++V K + C ++N+L+ VK + A ++ R
Sbjct: 56 IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY-RV 114
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ + N+LM+ + +R D +F+EM Q C P+ +Y IL+ +C
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A + F + +G +I Y +++ L G + A + E++ +GL A +
Sbjct: 175 VEKALKV----FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + G + A L E L +G P +++++ L GR E ++ E
Sbjct: 231 VYNSLIHGLGRSGR-ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
R G + +Y + L K +DEA E+ E G VP V +N L+ GLC +G
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG-LVPDVYTFNALMDGLCKSG 348
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + L M K+ GC + Y L+DGL + GR EA ++L EM Y P V TY
Sbjct: 349 RIHDAFILLGDM-KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTY 407
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N LI C G+ +A+ EE IS + +++++ +C
Sbjct: 408 NTLIDESCKGGRIEDALRLFEE-ISAKGFANTVTYNTILNGLC 449
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 168/384 (43%), Gaps = 12/384 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P T L KK K + K+F+E + + N N Y+ +I + + + +
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ--NCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V MK C + + I ++G +++A LF+ ++ V +N+L+ +
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + +AA LF R ++ + L+ L R+ A +FQE GC D
Sbjct: 240 GRSGRADAAAKLF-REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y++L+ LC +RL+EA + +F + + G D+ + L+ LC G+I DA
Sbjct: 299 VNLYNVLIDTLCKSKRLDEA----WEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L + R G P + + +E A L+ E G P + +Y+ + +
Sbjct: 355 ILLGDMKRAGC-TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV---IEEEMVKGT 362
GRI + ++ +E+ KGF + V Y L L G VDEA ++ +++E V G
Sbjct: 414 SCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV 472
Query: 363 FVPTVRVYNILLKGLCDAGNSAVA 386
P Y LL G AG S +A
Sbjct: 473 IDPDFVTYTTLLNGARQAGLSELA 496
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 37/226 (16%)
Query: 290 RGGIPSLASYSAMAIDL-----YN----------EGRIVEGDKVLDEM------------ 322
RGG+PS+ + + + L +N + R + ++ E+
Sbjct: 13 RGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEK 72
Query: 323 ------RTKGFWPSLV--MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
R +G +L Y + + A K G +AL V M + P +N+L+
Sbjct: 73 SVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY-RVMGQSGLRPDTYTFNVLM 131
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
A ++M Q C N TY IL+D +C+ G +A +V +M R
Sbjct: 132 NAFKKAKRVDSVWKLFEEMQNQ-NCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC 190
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P + TY +I GL G +A EEM S+ + V++SL+
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 188/411 (45%), Gaps = 15/411 (3%)
Query: 74 DSCECKDSVFA--TAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESK 130
++C+C V A T I Y +AG + A+ +F+ L Q +C SF+TL+ + K S+
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRES 188
A +F + G +++ + N L + C CR L A + M D +
Sbjct: 63 ATDALAVF-QEMLGAGLQADVNVCNTL--IHCTCRLGMLRQARRLLHHMTAHAFVLDVFT 119
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y LM L R +A + F + + G D V+Y L+ L QGK+ +A+++L
Sbjct: 120 YSYLMDALGKAGRAAKALEV----FSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELL 175
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
E + RKG+ P R + I + + E A S R P + +Y+ + L
Sbjct: 176 EDMNRKGI-MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKK 234
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
R E + DEM+ P L + + L K G +++ALE +VK VP
Sbjct: 235 LRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ-SARLVKMGHVPNSY 293
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+YN L+ G C +G + M + C + TY ILV G R G A +L+E
Sbjct: 294 IYNALISGFCRSGQVDKGYELFQDMI-ECSCFPDSITYTILVLGFSRRGHTSMAMELLQE 352
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
M+ + P + TYNVLIR L G+ +A +EMI++ PD+ +S+L
Sbjct: 353 MVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 16/308 (5%)
Query: 182 CYPDRESYHILMKGLC----NDRRLNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALC 236
C PD +Y+ L+ G C DR L+ MF R+ Q+GS + + V + TL+ LC
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALD--------MFRRLKQEGSCKPNAVSFDTLVIFLC 58
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ DA+ + +++L GL+A + + + C C G + A+ L++ + +
Sbjct: 59 KMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGM-LRQARRLLHHMTAHAFVLDV 117
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS + L GR + +V M+ G P V+Y ++ L K G VDEALE++E+
Sbjct: 118 FTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 177
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
KG +P R YNI++ L G A + M ++ + TY L++GL +
Sbjct: 178 MNRKG-IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVTYNTLLNGLKKL 235
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R EA + +EM P + T+ LI L G+ +A+ ++ +P+ ++
Sbjct: 236 RRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIY 295
Query: 477 SSLVASVC 484
++L++ C
Sbjct: 296 NALISGFC 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
R + P Y +++ L + R E ++ D+M+ + C + F T I T A+AG++ +
Sbjct: 216 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 275
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSL 154
A+ L + V + +N L+ + +++ + LF SC+ S+
Sbjct: 276 ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP-------DSI 328
Query: 155 NLLMDVLCQCRR--SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ VL RR + +A+ + QEM +G P +Y++L++ L ++ +A Y++
Sbjct: 329 TYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA----YTL 384
Query: 213 FWRISQKGSGEDIVIYRTL 231
F + KG D+ Y L
Sbjct: 385 FKEMIAKGFNPDMQTYSAL 403
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 203/406 (50%), Gaps = 15/406 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I + +A +L+EA + + + + V ++N+L+ + K +++ A +L +
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG 217
Query: 143 YGWEVKSRIQSLNLLMDVLC-QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + L+ LC + RR + A + ++M GC PD SY+ L+ GL ++
Sbjct: 218 F----SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA L F + ++G ++ Y L+ L + ++ +A ++ +++ GL+ P +
Sbjct: 274 VSEALKL----FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE-PDA 328
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + +E A ++ + +G +P + S++A+ L E R+ E + +L
Sbjct: 329 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 388
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA- 380
M KG P+ + + + + G +A+ +E M+K PTV YNIL+ GLC A
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE-MLKRGVKPTVVTYNILVDGLCKAR 447
Query: 381 --GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A+ M ++ G V + TY L+DGL + G+ +A R+L M + P V
Sbjct: 448 QEGRIKEAITLFDAMIEK-GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 506
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN LI GLC + K EA+ M+ + +PD + ++++++C
Sbjct: 507 YTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALC 552
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 207/445 (46%), Gaps = 15/445 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ L R+++ + + ++M + T + + + G+L+EA+ +F
Sbjct: 84 NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIF 143
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ V ++N L+ K KL+ A + R V + + N L++ LC+
Sbjct: 144 DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD-VVTYNSLVNGLCK 202
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND-RRLNEATHLLYSMFWRISQKGSG 222
R D A + + F P+ +Y L+ GLC + RRL A LL M G
Sbjct: 203 NGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRRLESARQLLEKMVL----NGCK 255
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DIV Y L+ L + + +A+++ +LR+G + P+ + I + + + A
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE-PEVPTYNILIDGLLKEDRVNEAFE 314
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + + G P +Y+ L GR+ + +L +M KG P +V + A + L
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+ VDEA EV+ M P +N L+ G C AG A+ K+M K+ G
Sbjct: 375 KEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR-GVKPT 432
Query: 403 GETYGILVDGLCR---DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
TY ILVDGLC+ +GR EA + + M+ + P V TY+ LI GL GK +A
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 492
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L M ++ +P++ ++SL++ +C
Sbjct: 493 LLGAMEAKGCIPNVYTYNSLISGLC 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 182/370 (49%), Gaps = 15/370 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS--RIQSLNLLMDVLCQCRRSDLALHVF 174
+ LL+ ++K K+E AH R VK I + N+ + LC+ R A VF
Sbjct: 18 TVGILLRSLLKSGKIEKAH----RFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M G +P+R +Y+ L+ GLCN R+++A +++ R+ + G D+V Y TLL
Sbjct: 74 DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQ----ALYERMIKAGYSPDVVTYNTLLHG 129
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C GK+ +A++I + +++G P + + + ++ A+ ++ + +P
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGF-VPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+++ L GR+ E ++ + KGF P+++ Y ++ L ++ E+ +
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQL 245
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+MV P + YN L+ GL + A+ + +Q G TY IL+DGL
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLL 304
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++ R EA + ++ P TY V I GLC G+ +A++ L++M + +PD+
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 475 VWSSLVASVC 484
++++ +C
Sbjct: 365 SHNAVINGLC 374
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 198/428 (46%), Gaps = 49/428 (11%)
Query: 40 NYRHNGPVYASMI-GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
+ N Y+++I G+ E R+ ++++++M + C+ + I AR ++E
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLL 157
A+ LF ++ + ++N L+ ++KE ++ A LF +G E + + +
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA--ITYTVF 334
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+D LC+ R + AL + ++MD +GC PD S++ ++ GLC ++R++EA LL M
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM----E 390
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
KG + + + TL+ C GK + AM +++L++G+K
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK-------------------- 430
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDL---YNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
P++ +Y+ + L EGRI E + D M KG P +V Y
Sbjct: 431 ----------------PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
A + L K G +D+A ++ KG +P V YN L+ GLC A+ M
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGC-IPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ GCV + TYG ++ LC+ +A + + L P Y LI GLC++ +
Sbjct: 534 EK-GCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARV 592
Query: 455 YEAVMWLE 462
EA+ L+
Sbjct: 593 DEALKLLQ 600
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 212/464 (45%), Gaps = 21/464 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALKIF A ++ + + Y ++I +++++ E + ++ +M +S + +
Sbjct: 139 ALKIFDGAVKR--GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196
Query: 87 IRTYARAGQLNEAVSLF--KNLSQFNCVNWTQSFNTLLKEMVK-ESKLEAAHILFLRSCY 143
+ + G+++EA L K S N + ++ + L +E+ + ES + + L C
Sbjct: 197 VNGLCKNGRVDEARMLIVDKGFSP-NVITYSTLISGLCRELRRLESARQLLEKMVLNGC- 254
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
K I S N L+ L + + AL +F + QG P+ +Y+IL+ GL + R+N
Sbjct: 255 ----KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVN 310
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA + +F + + G D + Y + LC G+++DA+ +L+ + KG P
Sbjct: 311 EA----FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC-VPDVVS 365
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
H + + ++ A+ L++ +G P+ S++ + G+ + EM
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425
Query: 324 TKGFWPSLVMYEAKLAALFK---DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+G P++V Y + L K +G + EA+ + + + KG VP V Y+ L+ GL A
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR-VPDVVTYSALIDGLGKA 484
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A L M + GC+ N TY L+ GLC + EA + M+ + P T
Sbjct: 485 GKLDDARRLLGAMEAK-GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTIT 543
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y +I LC +A+ + + +P ++ SL+ +C
Sbjct: 544 YGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE A + + L++G + +++++ L RI + V D MR GFWP+ + Y A
Sbjct: 32 IEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNA 90
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L+ L G + +A + + E M+K + P V YN LL G C G A+ K+
Sbjct: 91 LLSGLCNGGRMSDA-QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G V + TY L++G C+ + EA R+L+ M+ S P V TYN L+ GLC G+ E
Sbjct: 150 -GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDE 208
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A M + + + P++ +S+L++ +C L R+ LE++
Sbjct: 209 ARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 229/538 (42%), Gaps = 60/538 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P L T L + K AL++ E ++ P+ R Y +I L ++ R++E
Sbjct: 77 PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVR----TYNCLISTLGKAGRLSE 132
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ +M+ C + + I + G+ +A+ L + + + C ++++L+
Sbjct: 133 AFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLIT 192
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQ-----SLNLLMDVLCQCRRSDLAL------- 171
+ K+ + A LF E+K R + + LMD L + R D AL
Sbjct: 193 GLGKDGETVKAFKLF------QEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 172 ----------------------------HVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
++ EM GC PD +Y L+ GL +L+
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA +L M ++G D + Y TL+ L G + DA ++ +++ KG P
Sbjct: 307 EACQVLKKM----EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN-PDVVT 361
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + +E A L E G P L +Y ++ L G++ + D++ EMR
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KG P ++ Y A L +L + G EA ++ E+ M + +P V Y+ LL GL
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFED-MKESGLLPDVATYDALLLGLSKTKEV 480
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A LK++ +Q GC + + ++ L G EA +L+ + WP +YN
Sbjct: 481 DDACGLLKELIEQ-GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
LI L G+ EA LE++ Q PDI +SSL++++ T ++ + LE++S
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL-GQTGQIDTAFELLEEMS 596
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 190/440 (43%), Gaps = 51/440 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + + EV+ +M+ C+ + T + +AGQ +EA+ L +
Sbjct: 47 YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQ 163
CV +++N L+ + K +L A LF R C + N L+ L +
Sbjct: 107 DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV-----PDTFTYNSLIYGLGK 161
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RS A+ + +EM+ GC PD +Y L+ GL D +A + +F + ++G
Sbjct: 162 VGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKA----FKLFQEMKRRGRKP 217
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D + + L+ AL G++ DA+++L+++ +G+K
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVK-------------------------- 251
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P + +Y+A+ G +VE +LDEM+ G P +V Y + L K
Sbjct: 252 ----------PGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+DEA +V+ ++M K P YN L+ GL AG A +M K GC +
Sbjct: 302 ASQLDEACQVL-KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM-KSKGCNPDV 359
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ L + R A + EEM P + TY +I L G+ +A E
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Query: 464 MISQAKLPDISVWSSLVASV 483
M + PD+ +++ + S+
Sbjct: 420 MRGKGLSPDVITYNAFLNSL 439
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 211/475 (44%), Gaps = 45/475 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + K + A K+F+E K + + + + +++ L ++ R+ +
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRR--GRKPDSITFTALMDALGKAGRVDDAL 239
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++D+MK + + I + + G L EA +L + + C +++ L+ +
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K S+L+ A CQ V ++M+ +GC PD
Sbjct: 300 IKASQLDEA---------------------------CQ---------VLKKMEKEGCPPD 323
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GL LN+A L F R+ KG D+V Y TL+ AL +++ A
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRL----FDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ E++ G++ P + + ++ A L +E +G P + +Y+A
Sbjct: 380 VLFEEMESVGIQ-PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L GR E K+ ++M+ G P + Y+A L L K VD+A +++E + +G
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+++ ++ L+ L GN A L+ + G +Y L+D L + GR EA
Sbjct: 499 SLK-FDECLEILTSWGNVDEAHELLQ-FANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LE++ + P + +Y+ LI L G+ A LEEM + +S+LV
Sbjct: 557 LEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 165/338 (48%), Gaps = 7/338 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L +++++ E +V+ +M+ + C + T I +AG LN+A LF +
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM 350
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C +++TL+ + K +++E+A +LF ++ + + ++ VL + +
Sbjct: 351 KSKGCNPDVVTYSTLITALGKAARVESACVLF-EEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F EM +G PD +Y+ + L R EA + F + + G D+
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI----FEDMKESGLLPDVA 465
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y LL L ++ DA +L++++ +G A S + L +++ A L+
Sbjct: 466 TYDALLLGLSKTKEVDDACGLLKELIEQGC-AFDSLKFDECLEILTSWGNVDEAHELLQF 524
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A +G P +SY+A+ L GR+ E L++++ +G P +V Y + ++AL + G
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+D A E++ EEM K + R Y+ L++ L D G A
Sbjct: 585 IDTAFELL-EEMSKRGLKLSPRSYSNLVRKLQDWGARA 621
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 7/300 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ +Y+ L+ L + EA L F + D+V Y L+ +L GK +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLL----FEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A++++ ++ KG K + + C G+ + A L+ E G +P + +Y+ +
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQ-FDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L GR+ E + EMR +G P Y + + L K G +A+E++EE M +
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE-MERHGC 180
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+ L+ GL G + A ++M K+ G + T+ L+D L + GR +A
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEM-KRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L+EM R P V TYN LI G +G EA L+EM PD+ +S L+ +
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 61/156 (39%), Gaps = 34/156 (21%)
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS------------------------ 394
+KG P V YN LL L AG A + +++
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 395 ----------KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ GC N TY LVD L + G+F EA R+L EM P V TYN L
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I L G+ EA EM + +PD ++SL+
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLI 156
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 196/402 (48%), Gaps = 13/402 (3%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ IR + R G+ +A + + L Q V ++N L+ K +++ A + R
Sbjct: 96 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR--- 152
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + N ++ LC + A+ V + CYPD +Y IL++ C + +
Sbjct: 153 -MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 211
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A LL M KGS D+V Y L+ +C +G++ +A++ L + G + P
Sbjct: 212 QAMKLLDEM----RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQ-PNVIT 266
Query: 264 HRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
H I L C+ G ++ A+ L+++ L +G PS+ +++ + L +G + +L++M
Sbjct: 267 HNIILRSMCSTGRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P+ + Y L K+ +D A+E ++ + +G + P + YN LL LC G
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY-PDIVTYNTLLTALCKDGK 384
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VAV L ++S + GC TY ++DGL + G+ A ++L+EM + P + TY+
Sbjct: 385 VDVAVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GL GK EA+ + ++ P+ ++S++ +C
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 194/402 (48%), Gaps = 11/402 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ I Y ++G+++ A+ + L + N ++NT+L+ + KL+ A + R
Sbjct: 129 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
E + + +L++ C+ A+ + EM +G PD +Y++L+ G+C + R
Sbjct: 186 LQ-KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+EA L +M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 245 LDEAIKFLNNM----PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G + A ++ + + G P+ SY+ + E ++ + LD
Sbjct: 301 TFNILINFLCRQGL-LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M ++G +P +V Y L AL KDG VD A+E++ + KG P + YN ++ GL G
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVG 418
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ L +M ++ G + TY LV GL R+G+ EA + ++ P TY
Sbjct: 419 KTERAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 477
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
N ++ GLC + A+ +L MIS+ P + ++ L+ +
Sbjct: 478 NSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 47/381 (12%)
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L+ +V+ +LE Y ++ I +L+ C+ ++ A V + ++ G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRG-FCRIGKTKKATWVMEILEQSG 122
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD +Y++L+ G C ++ A +L M D+V Y T+L LCD GK+
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRM-------NVAPDVVTYNTILRTLCDSGKL 175
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ AM++L++ L+K C P + +Y+
Sbjct: 176 KQAMEVLDRQLQK---------------EC---------------------YPDVITYTI 199
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ E + + K+LDEMR KG P +V Y + + K+G +DEA++ + G
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V +NI+L+ +C G A L M ++ GC + T+ IL++ LCR G
Sbjct: 260 C-QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLCRQGLLGR 317
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A +LE+M + P +YN L+ G C K A+ +L+ M+S+ PDI +++L+
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377
Query: 482 SVCCNTADLNVCRKTLEQLSS 502
++ C ++V + L QLSS
Sbjct: 378 AL-CKDGKVDVAVEILNQLSS 397
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 59/405 (14%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
KE YP+ Y +I + + + + +++D+M+ + + I + G
Sbjct: 188 KECYPDV----ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL---FLRSCYGWEVKSR 150
+L+EA+ N+ + C + N +L+ M + ++A +L + C
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC-----SPS 298
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L++ LC+ A+ + ++M GC P+ SY+ L+ G C +++++ A L
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M R G DIV Y TLL ALC GK+ A++IL ++ K
Sbjct: 359 IMVSR----GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK---------------- 398
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G P L +Y+ + L G+ K+LDEMR KG P
Sbjct: 399 --------------------GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMY 389
++ Y + ++ L ++G VDEA++ + ++G + P YN ++ GLC + + A+ +
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHD--LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496
Query: 390 LKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
L M SK+ C TY IL++G+ +G EA +L E+ R
Sbjct: 497 LAYMISKR--CKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 197/423 (46%), Gaps = 13/423 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKN 105
Y +I +S I +V+D+M D V + T +RT +G+L +A+ +
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
Q C ++ L++ KES + A L L K + + N+L++ +C+
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKL-LDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A+ M GC P+ +++I+++ +C+ R +A LL M +KG +
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML----RKGCSPSV 299
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + L+ LC QG + A+ ILEK+ G P S + L + ++ A ++
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGC-TPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ RG P + +Y+ + L +G++ ++L+++ +KG P L+ Y + L K G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ A+++++E KG P + Y+ L+ GL G A+ + + + +G N T
Sbjct: 419 KTERAIKLLDEMRRKG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGLGIRPNAIT 476
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ GLC+ + A L M+ + P TY +LI G+ G EA+ L E+
Sbjct: 477 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 536
Query: 466 SQA 468
S+
Sbjct: 537 SRG 539
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I ++ G+ A+ L +
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++++L+ + +E K++ A I F G ++ + N +M LC+ R+
Sbjct: 431 RRKGLKPDIITYSSLVSGLSREGKVDEA-IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+D A+ M + C P +Y IL++G+ + EA LL + R + +K S E +
Sbjct: 490 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 549
Query: 226 VI 227
+
Sbjct: 550 AV 551
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 200/446 (44%), Gaps = 12/446 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T + + K + A K F+E + N Y ++I LS+ R+
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG--GCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M C + + + + G+L+EA L L + + Q +++L+ +
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480
Query: 126 VKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+E LF +S E ++++ LC+ R D A +FQ M +GC P
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG-LCKTGRLDEACRIFQRMVSEGCKP 539
Query: 185 DRESYHILMKGLCNDR--RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
D +Y+IL+ GLC R R+ A LL+ + + G D V Y L LC G++
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDL----EKVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+++LE+ +G A + C G+ ++ A SL E + +GG P A+Y +
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ-VDRAVSLFQEMVRQGGAPDAAAYCCI 654
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L ++ + K DEM KG P++ Y A + AL G VDEA E + +G
Sbjct: 655 INGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGE 714
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
V +V +Y+ L+ G C A A+ + M + G V T L DGL R G+ +A
Sbjct: 715 LVGSVMIYDALIHGFCKALKVDAALKLFEDMISR-GNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGL 448
+L+EM P T+ ++ GL
Sbjct: 774 QELLQEMAAGGSPPHAATFTAILDGL 799
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 209/490 (42%), Gaps = 84/490 (17%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
++++ +++ K TA+ F+ A E+ ++H+ Y ++ +L ++ + ++M
Sbjct: 87 SHVAAVLRSLKVTGTAISFFRWAGEQ-AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
F IR++AR + ++AV+ F+ + + C
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRC-------------------- 185
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYH 190
K + + +L+D LC+ + A VF EM G PDR +
Sbjct: 186 ----------------KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+++ L +R+ EA + F ++ + G D + Y T++ L G Q+A+++L+
Sbjct: 230 AMVRTLLKAKRVKEAREV----FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+L K +P+ +Y + L G
Sbjct: 286 MLAKAC------------------------------------VPTEVTYGILVNSLCKAG 309
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +++ M GF P+ V+Y + + K G + EA + +E MV+ + P V +
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE-MVEAGYRPDVITH 368
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+++ GLC +GN A ++M + GC N TY ++ GL + GR A R+++ M+
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+P TY L+ G C +G+ EA L+E+ + P++ ++SSLV +C D
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLC----DG 483
Query: 491 NVCRKTLEQL 500
KTL+ L
Sbjct: 484 GSVEKTLDDL 493
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 211/491 (42%), Gaps = 38/491 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P L T L + K A ++F E A P R ++ +M+ L ++ R+ E
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR---ALHTAMVRTLLKAKRVKE 243
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+EV QM+ + T I A+AG EA+ + N+ CV ++ L+
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 124 EMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K LE A LF + + G+ S I + L+ + R A +F EM G
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYT--SLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD ++ +++ GLC +A F + + G ++V Y T++ L G++
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAA----KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCP----CNDGEDIEGAKSLINEALIRGGIPSLAS 298
+A +I++ ++ G P S + +C C G ++ A L++E P+L
Sbjct: 418 NAFRIMKGMIAHGC-FPDSVTY---ICLLDGFCKLGR-LDEAAQLLDELDKCSSSPNLQL 472
Query: 299 YSAMAIDLYNEGRI-------VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
YS++ L + G + E K E G S+++ L K G +DEA
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV------GLCKTGRLDEAC 526
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV--AVMYLKKMSKQVGCVANGETYGIL 409
+ + MV P YNIL+ GLC + + V A L + K VG + + TY L
Sbjct: 527 RIF-QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK-VGYLPDAVTYTPL 584
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
GLC+ G A ++LEE R + V Y L GLC G+ AV +EM+ Q
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 470 LPDISVWSSLV 480
PD + + ++
Sbjct: 645 APDAAAYCCII 655
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 207/467 (44%), Gaps = 22/467 (4%)
Query: 29 KIFKEAKEKYP-----NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
K KEA+E + + + Y +MI L+++ E +V+D M +C + +
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LR 140
+ + +AG L A LF+ ++ + + +L+ K +++ A LF +
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ Y +V + +++D LC+ + A F+EM GC P+ +Y +++GL
Sbjct: 359 AGYRPDVITH----TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+ A ++ M G D V Y LL C G++ +A Q+L++ L K +P
Sbjct: 415 RVANAFRIMKGMI----AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE-LDKCSSSPN 469
Query: 261 SRRHRIDLCPCNDGEDIEGA-KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + + DG +E L ++ ++ + L GR+ E ++
Sbjct: 470 LQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 320 DEMRTKGFWPSLVMYEAKLAAL--FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
M ++G P Y + L ++ V+ A ++ + + K ++P Y L GL
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD-LEKVGYLPDAVTYTPLCIGL 588
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G AV L++ S + G A+ Y L GLC G+ A + +EM+ + P
Sbjct: 589 CKIGEVDRAVKMLEEASSR-GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y +I GL + K +A + +EMI + + P ++ +++LV ++C
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA--GQLNEAVSLFKNLS 107
S+I L ++ R+ E + +M + C+ + + I R+ ++ A +L +L
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++ L + K +++ A +L S GW + + + L LC +
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW--NADVVAYTALCTGLCYQGQ 628
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ +FQEM QG PD +Y ++ GL ++L +A M KG +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG----KGQKPTVA 684
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ ALC G + +A E +L +G + + ++ A L +
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG +P+ + +++ L G+ + ++L EM G P + A L L K
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804
Query: 347 VDEALEVIEE 356
+ L++++E
Sbjct: 805 SGKLLKLVQE 814
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 225/497 (45%), Gaps = 32/497 (6%)
Query: 9 LTPTYLSQIIKKQKSPLT-ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK-- 65
L P + +++ + ++ L+ + + +PN++H ++MI IL S R+++ +
Sbjct: 66 LNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 125
Query: 66 -------------EVIDQMKG--DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
E+++ + +C DSVF IRT+ +A +L EA F L
Sbjct: 126 VLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKG 185
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFL---RSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ N L+ +V+ +E A ++ RS G V +LN++++ LC+ +
Sbjct: 186 YTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNV----YTLNIMVNALCKDGKM 241
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ E+ +G YPD +Y+ L+ + + EA L+++M KG +
Sbjct: 242 EKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAM----PSKGFSPGVYT 297
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC GK + A ++ ++LR GL + + + C G+ +E +++ ++
Sbjct: 298 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVE-TENIFSDM 356
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R +P L +S+M G + + + ++ G P V+Y + + GM+
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA+ + E + +G + V YN +L GLC A +M+++ G + T
Sbjct: 417 SEAMNLRNEMLQQGCAMDVV-TYNTILHGLCKRKMLGEADKLFNEMTER-GLFPDSYTLT 474
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+DG C+ G A + ++M + V TYN L+ G +G A +M+S+
Sbjct: 475 ILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 534
Query: 468 AKLPDISVWSSLVASVC 484
LP +S LV ++C
Sbjct: 535 EILPTPISFSILVNALC 551
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 205/438 (46%), Gaps = 30/438 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + + KEV +M + + + + + G E ++F ++
Sbjct: 297 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDM 356
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--C 164
+ V F++++ + L+ A +++ S ++ + N++ +L Q C
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVK----EAGLIPDNVIYTILIQGYC 411
Query: 165 RRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R+ + A+++ EM QGC D +Y+ ++ GLC + L EA L F ++++G
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL----FNEMTERGLF 467
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DG----E 275
D L+ C G +Q+AM++ +K+ K +R ++D+ N DG
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKM--------KEKRIKLDVVTYNTLLDGFGKVG 519
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
DI+ AK + + + + +P+ S+S + L ++G + E +V DEM +K P++++
Sbjct: 520 DIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICN 579
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS- 394
+ + + G + E+ E+M+ FVP YN L+ G N + A +KKM
Sbjct: 580 SMIKGYCRSGNASDG-EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEE 638
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
KQ G V + TY ++ G CR+ + EA VL +M+ R P TY LI G S
Sbjct: 639 KQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNL 698
Query: 455 YEAVMWLEEMISQAKLPD 472
EA + +EM+ + PD
Sbjct: 699 TEAFRFHDEMLQRGFSPD 716
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 204/461 (44%), Gaps = 28/461 (6%)
Query: 30 IFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
E +EK YP+ Y ++I S + E E++ M + T I
Sbjct: 247 FLSEVQEKGVYPDI----VTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVI 302
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGW 145
+ G+ A +F + + + ++ +LL E K+ +F +RS
Sbjct: 303 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS---R 359
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V + + +M + + D AL F + G PD Y IL++G C ++EA
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+L M Q+G D+V Y T+L LC + + +A ++ ++ +GL P S
Sbjct: 420 MNLRNEML----QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL-FPDSYTLT 474
Query: 266 IDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
I + DG +++ A L + + + +Y+ + G I ++ +
Sbjct: 475 ILI----DGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD 530
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +K P+ + + + AL G + EA V +E M+ + PTV + N ++KG C +G
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDE-MISKSIKPTVMICNSMIKGYCRSG 589
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR--SYWPCVE 439
N++ ++L+KM + G V + +Y L+ G ++ +A ++++M + P V
Sbjct: 590 NASDGEIFLEKMISE-GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN ++ G C + EA L +MI + PD S ++SL+
Sbjct: 649 TYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLI 689
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 176/403 (43%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F+ I +AG L +A SL + + C ++ T++ + K K++ A + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEA-VALMEK 59
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N L++ LC+ R + A+ + +++ GC PD +Y L+ GL +R
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA Y +F ++ +G D V Y L+ L GKI A + + + +G
Sbjct: 120 SFEA----YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC----- 170
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+P + + S M L GRI ++
Sbjct: 171 -------------------------------VPDVVTLSTMIDGLCKAGRIGAAVRIFKS 199
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P+ V+Y A + L K +D ALE++ + M K P YNIL+ GLC +G
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ-MKKAFCTPDTITYNILIDGLCKSG 258
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A A + +M + GC + TY IL+ G C+ G A V ++M P V TY
Sbjct: 259 DVAAARAFFDEM-LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTY 317
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI GLC + +A ++ + M + PD V+SSLV +C
Sbjct: 318 GTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 177/418 (42%), Gaps = 43/418 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
++ +I L ++ + + + + + C + T + A+ ++ EAV+L + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++N LL + K +LE A I LR + + L+D L + +R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEA-IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S A +F+EM +G D Y L++GL ++ +A+ S++ ++ +G D+V
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQAS----SVYKTMTSQGCVPDVV 175
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
T++ LC G+I A++I + + +GL
Sbjct: 176 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLA----------------------------- 206
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ YSA+ L ++ ++L +M+ P + Y + L K G
Sbjct: 207 -------PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V A +EM++ P V YNIL+ G C AGN+ A MS C N TY
Sbjct: 260 V-AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR-CSPNVVTY 317
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
G L+ GLC+ + +AS + M R P Y+ L+ GLC GK M +EM
Sbjct: 318 GTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 186/442 (42%), Gaps = 55/442 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L+++ +I E +++++ + C + + + + G+L EA+ L + +
Sbjct: 36 TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL-----LMDVL 161
C ++ +L+ + K+ + A+ LF E+ SR +L+ L+ L
Sbjct: 96 VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF------KEMASRGLALDTVCYTALIRGL 149
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
Q + A V++ M QGC PD + ++ GLC R+ A + SM R G
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR----GL 205
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ V+Y L+ LC K+ A+++L + ++K P + + I
Sbjct: 206 APNEVVYSALIHGLCKARKMDCALEMLAQ-MKKAFCTPDTITYNI--------------- 249
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
LI G L G + DEM G P + Y ++
Sbjct: 250 ------LIDG--------------LCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF 289
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G D A V ++M P V Y L+ GLC A +Y + M K+ GC
Sbjct: 290 CKAGNTDAACGVF-DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHM-KERGCPP 347
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y LVDGLC+ G+ LE +L + + RS +T LI LC + EAV L
Sbjct: 348 DSFVYSSLVDGLCKSGK-LEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAV-SL 405
Query: 462 EEMISQAKLPDISVWSSLVASV 483
I + +P ++S+++++
Sbjct: 406 FNAIRKEGMPHPYAYNSIISAL 427
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 47/353 (13%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + K+K A K+FKE + + Y ++I L ++ +I +
Sbjct: 102 PDVVTYTSLIDGLGKKKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQAGKIPQAS 159
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-------------------- 105
V M C +T I +AG++ AV +FK+
Sbjct: 160 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 219
Query: 106 ------------LSQFN---CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
L+Q C T ++N L+ + K + AA F K
Sbjct: 220 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARA-FFDEMLEAGCKPD 278
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+ C+ +D A VF +M C P+ +Y L+ GLC R+L +A+ LY
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS--LY 336
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI-DLC 269
+ + ++G D +Y +L+ LC GK++ + +++ R G+ ++R I LC
Sbjct: 337 --YQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC 394
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
N ++ A SL N A+ + G+P +Y+++ L G++ EG V EM
Sbjct: 395 KAN---RVDEAVSLFN-AIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 43/345 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I L + R E ++ +M + IR +AG++ +A S++K +
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ CV + +T++ + K ++ AA +F +S + + L+ LC+ R+
Sbjct: 166 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF-KSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL + +M C PD +Y+IL+ GLC + A + F + + G D+
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAAR----AFFDEMLEAGCKPDVY 280
Query: 227 IYRTLLFALCDQGKIQDAMQILEKI--------------LRKGL-------KAPKSRRHR 265
Y L+ C G A + + + L GL KA +H
Sbjct: 281 TYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHM 340
Query: 266 IDL-CP-------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+ CP C G+ +EG L +E + R G+ + + + + L R
Sbjct: 341 KERGCPPDSFVYSSLVDGLCKSGK-LEGGCMLFDE-MERSGVANSQTRTRLIFHLCKANR 398
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+ E + + +R +G P Y + ++AL K G V+E V +E
Sbjct: 399 VDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQE 442
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 225/527 (42%), Gaps = 75/527 (14%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL AL FK ++H + MI L+ ++ ++ ++ QMK C + +F
Sbjct: 56 PL-ALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF 113
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ I Y + G AV +F + +F C + +N +L ++ E++++ ++++ R
Sbjct: 114 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY-RDMK 172
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES--------------- 188
+ + + N+L+ LC+ + D A + EM +GC P+ S
Sbjct: 173 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVK 232
Query: 189 ---------------YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
Y+ L+ GLC +R L+ M +KG +++ Y TL+
Sbjct: 233 EGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMV----EKGISPNVISYSTLIN 288
Query: 234 ALCDQGKIQDAMQILEKILRKG-----------LKAPKSRRHRID-------------LC 269
L + G+I+ A +L ++L++G +K R D L
Sbjct: 289 ELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQ 348
Query: 270 P------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P C+ G +I+ A S+ G P++ +Y ++ G +
Sbjct: 349 PNVVAYNTLVQGFCSHG-NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVY 407
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ ++M T G P++V+Y + + AL + EA +I E M K P+V +N +KGL
Sbjct: 408 IWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLI-EIMSKENCAPSVPTFNAFIKGL 466
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
CDAG A ++M +Q C N TY L+DGL + R EA + E+ +R
Sbjct: 467 CDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 526
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN L+ G C+ G A+ + +M+ K PD + ++ + C
Sbjct: 527 TSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYC 573
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 199/483 (41%), Gaps = 62/483 (12%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S + + + KE ++ + VY ++I L + E++ +M
Sbjct: 223 SSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVIS 282
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++T I + +GQ+ A SL + + C + ++L+K A ++ +
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G+ ++ + + N L+ C D A+ VF M+ GC P+ +Y L+ G L
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
A ++ M G ++V+Y +++ ALC K ++A ++E + ++
Sbjct: 403 EGAVYIWNKML----TSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCA----- 453
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
PS+ +++A L + GR+ +KV +M
Sbjct: 454 -------------------------------PSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482
Query: 323 RTK-GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ P++V Y L L K ++EA + E ++G T YN LL G C+AG
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWST-STYNTLLHGSCNAG 541
Query: 382 NSAVAVMYLKKMSKQVGCVANGE-----TYGILVDGLCRDGRFLEASRVLEEMLI--RSY 434
+A+ + KM + NG+ T +++ C+ G+ A ++L+ + R +
Sbjct: 542 LPGIALQLVGKM------MVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKW 595
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P V +Y +I GLC + + V+ E MIS+ +P ++ SVC A + +
Sbjct: 596 RPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP-------ILRSVCQEAARMTIPN 648
Query: 495 KTL 497
L
Sbjct: 649 DVL 651
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 194/410 (47%), Gaps = 20/410 (4%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S + +R R +L++++ LF ++ Q + F+ LL + K K +
Sbjct: 47 SDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV------ 100
Query: 141 SCYGWE------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
Y WE + + + N+L++ C+C + LAL +M G PD ++ L+
Sbjct: 101 -IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLN 159
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C R+ +A + MF R+ + G ++VIY T++ LC ++ +A+ +L ++
Sbjct: 160 GFCRGDRIYDALY----MFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD 215
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G++ + + CN G + A +++ R P + +++A+ EGRI E
Sbjct: 216 GIRPDAVTYNSLISGLCNSGR-WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISE 274
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+++ +EM + P +V Y + L +DEA ++ + KG F P V Y+IL+
Sbjct: 275 AEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCF-PDVVTYSILI 333
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C + + +MS Q G V N TY +L+ G CR G+ A + + M+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYNVL+ GLC GK +A++ L +M DI ++ ++ +C
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMC 442
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 10/387 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGW 145
+ + R QL+ A+S + + +F +LL + ++ A +F R G+
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
E I N ++D LC+ ++ D AL + M+ G PD +Y+ L+ GLCN R ++A
Sbjct: 183 EPNVVIY--NTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
T ++ M +++ D+ + L+ A +G+I +A ++ E+++R+ L P +
Sbjct: 241 TRMVSCM----TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD-PDIVTYS 295
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + ++ A+ + + +G P + +YS + ++ G K+ EM +
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + V Y + + G ++ A E+ + MV P + YN+LL GLCD G
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW-MVFCGVPPNIITYNVLLHGLCDNGKIEK 414
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ L M K G A+ TY I++ G+C+ G +A + + ++ P + TY ++
Sbjct: 415 ALVILADMQKS-GMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPD 472
GL G + EA +M LP+
Sbjct: 474 LGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 43/339 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E Y N +Y ++I L +S ++ +++++M+ D + +
Sbjct: 170 ALYMFDRMVEM--GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I +G+ ++A + +++ +FN L+ VKE ++ A L+
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY-EEMIRRS 286
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I + +LL+ LC R D A +F M +GC+PD +Y IL+ G C +++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 207 HLLYSMFWRISQKG-----------------SGE------------------DIVIYRTL 231
L F +SQ+G +G+ +I+ Y L
Sbjct: 347 KL----FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
L LCD GKI+ A+ IL + + G+ A + I C GE + A L ++G
Sbjct: 403 LHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE-VADAWDLYCSLNLKG 461
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
P + +Y+AM + LY +G E D + +M+ G P+
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 190/405 (46%), Gaps = 18/405 (4%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+++A+ + + TL+ + K + AA + LR
Sbjct: 130 TTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA-LQLLRRVD 188
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V+ + N ++D +C+ + + A ++ EM +G PD +Y L+ G C +LN
Sbjct: 189 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLN 248
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A +F ++ + D+ + L+ C +G++++A +L ++++G+K
Sbjct: 249 DAI----GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD---- 300
Query: 264 HRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ C DG + + AKS+ N G ++ SY+ M ++ E +
Sbjct: 301 -VVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLC 378
EM K P +V Y + + L K G + AL++++E +G VP ++ YN +L LC
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG--VPHDKITYNSILDALC 417
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A+ L KM K G + TY IL+DGLC+ GR +A + E++L++ Y V
Sbjct: 418 KNHQVDKAIALLTKM-KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TY V+I+G C +A+ L +M +P+ + ++ S+
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 176/387 (45%), Gaps = 8/387 (2%)
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
VS F + N F +L +VK + + A I R + S + + N+L++
Sbjct: 41 VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA-ISLHREMEFNGIASDLVTFNILIN 99
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
Q + + VF + +G P+ + L+KGLC ++++A H ++
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHF----HDKVVAL 155
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + V Y TL+ LC G+ A+Q+L ++ K L P + + + +
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK-LVQPNVVMYNTIIDSMCKVKLVNE 214
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L +E + +G P + +YSA+ G++ + + ++M ++ P + + +
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K+G V EA V+ M +G P V Y L+ G C A M+ Q G
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQG-IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA-QGGV 332
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
AN ++Y I+++G C+ + EA + +EM ++ P V TYN LI GLC GK A+
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCN 486
++EM + D ++S++ ++C N
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKN 419
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 186/405 (45%), Gaps = 10/405 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS 141
F I +++ G + + S+F N+ + + TL+K + + ++ +A H
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ + L++ LC+ ++ AL + + +D + P+ Y+ ++ +C +
Sbjct: 154 ALGFHLNKV--CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+NEA + ++ + KG D+V Y L+ C GK+ DA+ + K++ + +
Sbjct: 212 VNEA----FDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G ++ AK+++ + +G P + +Y ++ ++ + + +
Sbjct: 268 TFSILVDGFCKEGR-VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G ++ Y + K VDEA+ + +E K +P V YN L+ GLC +G
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK-NIIPDVVTYNSLIDGLCKSG 385
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ + +M + G + TY ++D LC++ + +A +L +M P + TY
Sbjct: 386 KISYALKLVDEMHDR-GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTY 444
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+LI GLC G+ +A E+++ + + ++ ++ C N
Sbjct: 445 TILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 130/279 (46%), Gaps = 6/279 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ + R+ E K V+ M + + + + Y Q+N+A S+F ++
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q QS+N ++ K K++ A LF + + + + + N L+D LC+ +
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLF-KEMHCKNIIPDVVTYNSLIDGLCKSGKI 387
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + EM +G D+ +Y+ ++ LC + ++++A LL M +G D+
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM----KDEGIQPDMYT 443
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G+++DA I E +L KG + C D + + A +L+++
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC-DNDLFDKALALLSKM 502
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G IP+ +Y + + L+ + +K+L EM +G
Sbjct: 503 EDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 156/352 (44%), Gaps = 39/352 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + + + E ++ +M ++ I + G+LN+A+ LF
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWE---------------- 146
+ +F+ L+ KE ++ EA ++L + G +
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314
Query: 147 -----------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
V + +QS N++++ C+ ++ D A+++F+EM + PD +Y
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ GLC +++ A L+ M R G D + Y ++L ALC ++ A+ +L
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDR----GVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
K+ +G++ P + I + G ++ A+++ + L++G ++ +Y+ M +
Sbjct: 431 KMKDEGIQ-PDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ +L +M G P+ YE + +LF+ D A +++ E + +G
Sbjct: 490 DLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 217/485 (44%), Gaps = 17/485 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV- 67
L+ T + Q ++ ++P AL F+ + K + HN Y MI IL S + +
Sbjct: 93 LSKTTVLQTLQLIRTPAKALHFFRWVEAK--GFTHNEQSYFLMIEILGRSRNLNAARNFV 150
Query: 68 --IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
I++ G + + D F + IR+Y AG E++ +FK + + +FN+LL +
Sbjct: 151 FSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIV 210
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + A LF + V + N+L+ C D F+EM C PD
Sbjct: 211 LKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPD 270
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC ++ A +++ M + ++V Y TL+ C + + +A+
Sbjct: 271 VVTYNTLVDGLCRAGKVKIAHNVVKGMVKK--SPNLSPNVVTYTTLIRGYCMKQDMAEAL 328
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAI 304
+L +++ +GLK K + + C + + ++ K ++ + GG IP + + +
Sbjct: 329 SLLAEMVSRGLKPNKITYNTLIQGLC-EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G++ E V ++M P Y + +L + G A E +E K +
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 365 ------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V YN + + LC G + A +++ K+ + +Y L+ G CR+G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKR--GTQDPPSYKTLILGHCREGT 505
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+L ML R + P ETY ++I GL G A LE+M+ + LP +++ S
Sbjct: 506 PEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHS 565
Query: 479 LVASV 483
++A++
Sbjct: 566 ILAAL 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 177/431 (41%), Gaps = 20/431 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
Y +++ L + ++ V+ M S +V + T IR Y + EA+SL
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 332
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ ++NTL++ + + KL+ + +LN L+ C
Sbjct: 333 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTM 392
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND---RRLNEATHLLYSMFWRISQKGS 221
+ + A VF++M PD +Y +L++ LC RR E L + G
Sbjct: 393 GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGC 452
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ Y + LC GK + A ++ +++++G + P S + I L C +G E
Sbjct: 453 KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLI-LGHCREGTP-EAGF 510
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ L R +P +Y M L +G V K L++M P+ ++ + LAAL
Sbjct: 511 DLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAAL 570
Query: 342 FKDGMVDEALEVIE---EEMVKGTFVPTVRVYNILLK-GLCDAGNSAVAVMYLKKMSKQV 397
+ G E+ +++ E ++ + +L K GL D + ++Y +
Sbjct: 571 VEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLY------EN 624
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + E LV LC+ + LEA ++L L + ++ + +I GLC K EA
Sbjct: 625 GYLVKMEE---LVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEA 681
Query: 458 VMWLEEMISQA 468
E++ +
Sbjct: 682 FALYYELVEKG 692
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G E KV M+ G PS+V + + L+ + K G A ++ +E + P
Sbjct: 179 GLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYT 238
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+NIL++G C + K+MS+ C + TY LVDGLCR G+ A V++ M
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSR-FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGM 297
Query: 430 LIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +S P V TY LIRG C EA+ L EM+S+ P+ +++L+ +C
Sbjct: 298 VKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 42/390 (10%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL------NLLMDVLCQCRRSDLALH 172
N LK K + +A L + E++S + L ++ L R ALH
Sbjct: 54 NEGLKAATKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH 113
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI----Y 228
F+ ++ +G + +SY ++++ L R LN A + ++S+ +K SG + + +
Sbjct: 114 FFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSI-----EKKSGGAVKLGDRFF 168
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+L+ + G Q+++++ + + G+ +P L AK L +E L
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGV-SPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW-----------PSLVMYEAK 337
G+ D Y ++ G ++ M +GFW P +V Y
Sbjct: 228 DTYGVTP---------DTYTFNILIRGF-CMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 277
Query: 338 LAALFKDGMVDEALEVIEEEMVKGT--FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L + G V A V++ MVK + P V Y L++G C + A A+ L +M
Sbjct: 278 VDGLCRAGKVKIAHNVVKG-MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVS 336
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS-YWPCVETYNVLIRGLCSIGKQ 454
+ G N TY L+ GLC + + +LE M+ + P T N LI+ C++GK
Sbjct: 337 R-GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA E+M PD + +S LV S+C
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLC 425
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 203/428 (47%), Gaps = 20/428 (4%)
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T +R G++ EA++ ++ + S+ TL+ + K + AA + LR G
Sbjct: 128 TLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAA-LQLLRKIEG 186
Query: 145 WE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V+ + ++D C+ + A ++ EM + YP+ +++ L+ G C +L
Sbjct: 187 LLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLK 246
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M S ++ + L+ LC +G+++ A +L ++++G++
Sbjct: 247 EAVGLLNEM----SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEP----- 297
Query: 264 HRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + DG +++ AK + N +RG P++ SYS M L + E K+
Sbjct: 298 NVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLF 357
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM K P+ V Y + + L K G + + ++I+E +G + YN LL GLC
Sbjct: 358 KEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQ-PANIITYNSLLNGLCK 416
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L KM K G + TY LVDGLC++GR +A R+ +++L + Y +
Sbjct: 417 NHQVDKAIALLTKM-KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIR 475
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD---LNVCRKT 496
Y V+I GLC G EA+ L +M +PD + +L++++ N + + + R+
Sbjct: 476 MYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Query: 497 LEQLSSCS 504
+ + S CS
Sbjct: 536 IARESDCS 543
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 154/338 (45%), Gaps = 14/338 (4%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I N ++ L + +A+ Q+M+ +G P+ +++IL+ + +LN A +
Sbjct: 53 IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFA----F 108
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
SM +I + G D V TLL LC GK+++A+ + ++RK + +
Sbjct: 109 SMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGL 168
Query: 271 CNDGEDIEGAKSLINEA----LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C GE A L+ + L+R P + Y+A+ + +++ + EM K
Sbjct: 169 CKSGE-TRAALQLLRKIEGLLLVR---PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+P++V + + + G + EA+ ++ EM P V +NIL+ GLC G A
Sbjct: 225 IYPNVVTFNSLIYGFCIVGQLKEAVGLL-NEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L M KQ G N TY L+DG +A V + +R P V +Y+V+I
Sbjct: 284 TSVLSVMIKQ-GVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC EAV +EM + P+ +SSL+ +C
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC 380
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 190/431 (44%), Gaps = 49/431 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
L++AVS F ++ N N T FN +L +VK + + A I F + ++ +
Sbjct: 32 NLDDAVSSFNHILHMN--NHTPPIFEFNKILSSLVKMNHFKIA-ISFSQQMELKGIQPEM 88
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+L++ + + A + ++ G PD + + L++GLC + ++ EA +
Sbjct: 89 FTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEA----LN 144
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--IDLC 269
+ +K D V Y TL+ LC G+ + A+Q+L KI L P + ID
Sbjct: 145 FHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIID-S 203
Query: 270 PCNDGEDIEG----------------------------------AKSLINEALIRGGIPS 295
C D I+ A L+NE + P+
Sbjct: 204 FCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPN 263
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +++ + L EG + + VL M +G P++V Y + + F V++A V
Sbjct: 264 VYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFN 323
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
++G P V Y++++ GLC AV K+M + N TY L+DGLC+
Sbjct: 324 TISLRGV-TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLK-NMTPNTVTYSSLIDGLCK 381
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR + +++E+ R + TYN L+ GLC + +A+ L +M + PD+S
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMST 441
Query: 476 WSSLVASVCCN 486
+++LV +C N
Sbjct: 442 YTTLVDGLCKN 452
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 7/312 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F + I + GQL EAV L +S N +FN L+ + KE +++ A + L
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV-LSV 289
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V+ + + LMD + + A HVF + +G P+ SY +++ GLC ++
Sbjct: 290 MIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM 349
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA L F + K + V Y +L+ LC G+I D ++++I +G A
Sbjct: 350 VDEAVKL----FKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANII 405
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C + + ++ A +L+ + G P +++Y+ + L GR+ + ++ +
Sbjct: 406 TYNSLLNGLCKNHQ-VDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ KG+ ++ MY + L K+G DEAL ++ +M +P Y L+ L
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLL-SQMEDNGCMPDAVTYETLISALFKNN 523
Query: 382 NSAVAVMYLKKM 393
+ AV L++M
Sbjct: 524 KNGKAVKLLREM 535
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+FKE K N N Y+S+I L +S RI+++ ++ID++ + +
Sbjct: 353 AVKLFKEMHLK--NMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGW 145
+ + Q+++A++L + ++ TL+ + K +L+ A ++ C G+
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ R+ + ++++ LC+ D AL + +M+ GC PD +Y L+ L + + +A
Sbjct: 471 PLNIRMYT--VMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKA 528
Query: 206 THLLYSMFWRIS 217
LL M R S
Sbjct: 529 VKLLREMIARES 540
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 15/425 (3%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
RI E +++D+M + + R G+++EA L + N V FN
Sbjct: 320 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFN 375
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
TL+ V +L+ A + S I + N L+ LC+ A + EM
Sbjct: 376 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+GC P+ +Y IL+ C + RL EA ++L M S KG + V Y L+ ALC
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEM----SGKGLALNAVGYNCLISALCKDE 491
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
K+QDA+ + + KG K + + LC N E+ A L + L+ G I +
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE---ALGLYQDMLLEGVIANTI 548
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + G + E K++++M +G + Y + AL + G +++ L + E+
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M KG P NIL+ GLC GN A+ +L+ M + G + TY L++GLC+ G
Sbjct: 609 MSKG-LNPNNISCNILINGLCRTGNIQHALEFLRDMIHR-GLTPDIVTYNSLINGLCKTG 666
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA + +++ + P TYN LI C G +A + L + +P+ W
Sbjct: 667 RAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 726
Query: 478 SLVAS 482
LV++
Sbjct: 727 ILVSN 731
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 206/442 (46%), Gaps = 13/442 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY ++I LS+ R+ E+ +++++M C + F AI + +++EA L
Sbjct: 269 NAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 328
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++ L+ + + K++ A +L + + N L++
Sbjct: 329 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV-----PNPNVVLFNTLINGYVS 383
Query: 164 CRRSDLALHVFQE-MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R D A V E M GC PD +Y+ L+ GLC L A L+ M KG
Sbjct: 384 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM----QIKGCE 439
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+++ Y L+ C +G++++A +L+++ KGL + + C D E ++ A +
Sbjct: 440 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD-EKVQDALN 498
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ + +G P + +++++ L + E + +M +G + + Y + A
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G + EAL+++ + + +G + + YN L+K LC AGN + + M + G N
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPN 616
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+ IL++GLCR G A L +M+ R P + TYN LI GLC G+ EA+ +
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 676
Query: 463 EMISQAKLPDISVWSSLVASVC 484
++ + PD +++L++ C
Sbjct: 677 KLQVEGICPDAITYNTLISWHC 698
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 144/599 (24%), Positives = 236/599 (39%), Gaps = 123/599 (20%)
Query: 2 SVRWPRLLTP-------TYLSQIIKKQ-----KSPL---TALKIFKEAKEKYPNYRHNGP 46
W RLL P T L++I Q + PL T++++F+ A + Y H
Sbjct: 72 GTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQ-KGYCHMFD 130
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +I L + ++ QMK + ++S+F ++ Y RAG +A L ++
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 107 -SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
++C +S+N +L ++ + + +F + + + ++M LC
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM-LSKGISPTVYTFGVVMKALCLVN 249
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHIL--------------------------------- 192
D A + ++M GC P+ Y L
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309
Query: 193 --MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+ GLC R++EA L+ M R G + Y L+ LC GK+ +A +L K
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLR----GFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 365
Query: 251 ------ILRKGLKAPKSRRHRID---------LCPCNDGEDI----------------EG 279
+L L R R+D + G DI
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A+ L+NE I+G P++ +Y+ + EGR+ E VLDEM KG + V Y ++
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA----------------GNS 383
AL KD V +AL + + KG P + +N L+ GLC G
Sbjct: 486 ALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 384 AVAVMY-------LKKMSKQ-----------VGCVANGETYGILVDGLCRDGRFLEASRV 425
A + Y L++ + Q GC + TY L+ LCR G + +
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E+M+ + P + N+LI GLC G A+ +L +MI + PDI ++SL+ +C
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 663
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 194/419 (46%), Gaps = 21/419 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N Y ++ L ++ E + +++++ + +F T I Y G+L+EA
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV----VLFNTLINGYVSRGRLDEAK 391
Query: 101 S-LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLN 155
+ + +++ C ++NTL+ + K+ L +A L ++ C + + +
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC-----EPNVITYT 446
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+D C+ R + A +V EM +G + Y+ L+ LC D ++ +A +MF
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA----LNMFGD 502
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+S KG DI + +L+F LC K ++A+ + + +L +G+ A + + G
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A L+N+ L RG +Y+ + L G I +G + ++M +KG P+ +
Sbjct: 563 -MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L + G + ALE + + + +G P + YN L+ GLC G + A+ K+
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY L+ C++G F +A +L + + P T+ +L+ G Q
Sbjct: 681 E-GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 738
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 221/501 (44%), Gaps = 41/501 (8%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE- 66
LT T + Q+++K Q PL + + PN + A++I L +S ++ E +
Sbjct: 66 LTLTLIPQLLQKCQNYPLLLPNLIQTIASTSPN----PSIIATLIHFLVQSKKLPEAQSL 121
Query: 67 ---VIDQMKGDSCECKDS----------------VFATAIRTYARAGQLNEAVSLFKNLS 107
+I + E DS VF IRTY +A +L E F+ L
Sbjct: 122 LLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLR 181
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS----RIQSLNLLMDVLCQ 163
+ + N LL +VK ++ A Y VKS + +LN++++ LC+
Sbjct: 182 KRGFCVSINACNALLGAIVKVGWVDLAW-----KVYEDFVKSGNIVNVYTLNIMVNALCK 236
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D EM+ +G Y D +Y+ L+ C ++EA L+ M + KG
Sbjct: 237 DGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM----AGKGLKP 292
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ LC +G + A ++L+++L GL P + L ED+ A+ +
Sbjct: 293 GLFTYNALINGLCKEGSYERAKRVLDEMLGVGL-CPNAATFNPMLVESCRKEDVWEAERV 351
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
NE L RG +P L S+S++ G + ++M+ G P V+Y + +
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ V AL+ + EMV+ V V YN LL GLC A K+M ++ G +
Sbjct: 412 NDDVSGALK-MRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER-GVFPDF 469
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T L+ G C+DG +A + E M +RS P V TYN L+ G C +G+ +A +
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 464 MISQAKLPDISVWSSLVASVC 484
MIS+ P +S L+ C
Sbjct: 530 MISREIFPSYISFSILINGFC 550
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 184/434 (42%), Gaps = 26/434 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + K V+D+M G + F + R + EA +F +
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ---- 163
Q V SF++++ + +L A F +++ + L+ D +
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYF----------EKMKGVGLVPDTVIYTILI 406
Query: 164 ---CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
CR D+ AL + EM +GC D +Y+ L+ GLC + L++A L F + +
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL----FKEMVE 462
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G D TL+ C G + A+ + E + + LK + + C GE +E
Sbjct: 463 RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE-ME 521
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
AK L + + R PS S+S + + G + E ++ DEM+ KG P+LV +
Sbjct: 522 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ G + +A + + + +G P YN L+ N A + M ++ G
Sbjct: 582 KGYLRAGNLSKANDFLNTMISEGV-PPDCITYNTLINSFVKEENFDRAFFLINNMEER-G 639
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY ++ G R GR EA VL +M+ + P TY LI G S EA
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699
Query: 459 MWLEEMISQAKLPD 472
+EM+ + +PD
Sbjct: 700 RVHDEMLQRGFVPD 713
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 185/433 (42%), Gaps = 8/433 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ ++E ++D M G + + I + G A + +
Sbjct: 262 YNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML 321
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+FN +L E ++ + A +F V I S + ++ V +
Sbjct: 322 GVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLI-SFSSIVGVFSRNGEL 380
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL F++M G PD Y IL+ G C + ++ A + M ++G D+V
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV----ERGCVMDVVT 436
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TLL LC + DA ++ ++++ +G+ + C DG ++ A SL
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDG-NMTKALSLFETM 495
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+R P + +Y+ + G + + ++ +M ++ +PS + + + G+V
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA + +E KG PT+ N ++KG AGN + A +L M + G + TY
Sbjct: 556 SEAFRLWDEMKEKG-IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE-GVPPDCITYN 613
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L++ ++ F A ++ M R P + TYN ++ G G+ EA M L +MI +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 468 AKLPDISVWSSLV 480
PD S ++SL+
Sbjct: 674 GINPDKSTYTSLI 686
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G I ++ + + M L +G++ L EM KG + LV Y + A + G+V EA
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+++ KG P + YN L+ GLC G+ A L +M VG N T+ ++
Sbjct: 279 FGLVDCMAGKG-LKPGLFTYNALINGLCKEGSYERAKRVLDEMLG-VGLCPNAATFNPML 336
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
CR EA RV EML R P + +++ ++ G+ A+ + E+M +
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396
Query: 471 PDISVWSSLVASVCCN 486
PD +++ L+ C N
Sbjct: 397 PDTVIYTILINGYCRN 412
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 217/485 (44%), Gaps = 17/485 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV- 67
L+ T + Q ++ ++P AL F+ + K + HN Y MI IL S + +
Sbjct: 93 LSKTTVLQTLQLIRTPAKALHFFRWVEAK--GFTHNEQSYFLMIEILGRSRNLNAARNFV 150
Query: 68 --IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
I++ G + + D F + IR+Y AG E++ +FK + + +FN+LL +
Sbjct: 151 FSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIV 210
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + A LF + V + N+L+ C D F+EM C PD
Sbjct: 211 LKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPD 270
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC ++ A +++ M + ++V Y TL+ C + + +A+
Sbjct: 271 VVTYNTLVDGLCRAGKVKIAHNVVKGMVKK--SPNLSPNVVTYTTLIRGYCMKQDMAEAL 328
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAI 304
+L +++ +GLK K + + C + + ++ K ++ + GG IP + + +
Sbjct: 329 SLLAEMVSRGLKPNKITYNTLIQGLC-EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G++ E V ++M P Y + +L + G A E +E K +
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 365 ------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V YN + + LC G + A +++ K+ + +Y L+ G CR+G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKR--GTQDPPSYKTLILGHCREGT 505
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+L ML R + P ETY ++I GL G A LE+M+ + LP +++ S
Sbjct: 506 PEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHS 565
Query: 479 LVASV 483
++A++
Sbjct: 566 ILAAL 570
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G E KV M+ G PS+V + + L+ + K G A ++ +E + P
Sbjct: 179 GLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYT 238
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+NIL++G C + K+MS+ C + TY LVDGLCR G+ A V++ M
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSR-FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGM 297
Query: 430 LIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +S P V TY LIRG C EA+ L EM+S+ P+ +++L+ +C
Sbjct: 298 VKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 42/390 (10%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL------NLLMDVLCQCRRSDLALH 172
N LK K + +A L + E++S + L ++ L R ALH
Sbjct: 54 NEGLKAATKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH 113
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI----Y 228
F+ ++ +G + +SY ++++ L R LN A + ++S+ +K SG + + +
Sbjct: 114 FFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSI-----EKKSGGAVKLGDRFF 168
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+L+ + G Q+++++ + + G+ +P L AK L +E L
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGV-SPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW-----------PSLVMYEAK 337
G+ D Y ++ G ++ M +GFW P +V Y
Sbjct: 228 DTYGVTP---------DTYTFNILIRGF-CMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 277
Query: 338 LAALFKDGMVDEALEVIEEEMVKGT--FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L + G V A V++ MVK + P V Y L++G C + A A+ L +M
Sbjct: 278 VDGLCRAGKVKIAHNVVKG-MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVS 336
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS-YWPCVETYNVLIRGLCSIGKQ 454
+ G N TY L+ GLC + + +LE M+ + P T N LI+ C++GK
Sbjct: 337 R-GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 395
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA E+M PD + +S LV S+C
Sbjct: 396 EEAFSVFEKMSELRVQPDSATYSVLVRSLC 425
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 210/470 (44%), Gaps = 44/470 (9%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
+IK++K P AL IF E+ ++HN YA+++ L+ N + V+ QM ++C
Sbjct: 99 LIKREKDPQHALNIFNMVSEQ-NGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETC 157
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH 135
+ + +F ++ ++++ + + + ++ + ++ +T L ++ ++++ A
Sbjct: 158 KFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLAR 217
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMK 194
L L + K + N+L+ C+ D A + +EM + + YP+ +Y LM
Sbjct: 218 KLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMD 277
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + R+ EA L M +S+ D + Y L+ C GK
Sbjct: 278 GLCRNGRVKEAFDLFEEM---VSRDHIVPDPLTYNVLINGFCRGGK-------------- 320
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
P R+ I N G P++ +YSA+ L G++ +
Sbjct: 321 ----PDRARNVIQFMKSN------------------GCYPNVYNYSALVDGLCKVGKLED 358
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
VL E++ G P V Y + + L ++G DEA+E++EE G +V +N+LL
Sbjct: 359 AKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSV-TFNVLL 417
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G A+ ++K+ +Q G N +Y I+++ L + A +L ML R +
Sbjct: 418 GGLCREGKFEEALDMVEKLPQQ-GVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGF 476
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T N L+ LC G +A + L +++ P + W L+ +C
Sbjct: 477 QPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLIC 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 147/303 (48%), Gaps = 16/303 (5%)
Query: 66 EVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLK 123
E++++M+ + V ++T + R G++ EA LF+ + S+ + V ++N L+
Sbjct: 254 EIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLIN 313
Query: 124 EMVKESKLEAAH--ILFLRS--CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+ K + A I F++S CY + + + L+D LC+ + + A V E+
Sbjct: 314 GFCRGGKPDRARNVIQFMKSNGCY-----PNVYNYSALVDGLCKVGKLEDAKGVLAEIKG 368
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD +Y L+ LC + + +EA LL M + G D V + LL LC +G
Sbjct: 369 SGLKPDAVTYTSLINFLCRNGKSDEAIELLEEM----KENGCQADSVTFNVLLGGLCREG 424
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
K ++A+ ++EK+ ++G+ K +RI L +++ AK L+ L RG P A+
Sbjct: 425 KFEEALDMVEKLPQQGVYLNKGS-YRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATS 483
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + + L G + + L ++ GF P L +E + + ++ + E+++E +V
Sbjct: 484 NELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELVV 543
Query: 360 KGT 362
T
Sbjct: 544 TNT 546
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ ++ + K+G +D A E++EE P + Y+ L+ GLC G A
Sbjct: 231 PNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFD 290
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++M + V + TY +L++G CR G+ A V++ M +P V Y+ L+ GL
Sbjct: 291 LFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGL 350
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C +GK +A L E+ PD ++SL+ +C N
Sbjct: 351 CKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRN 388
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 195/399 (48%), Gaps = 13/399 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + R G+ +A + + L Q V ++N L+ K +++ A + R
Sbjct: 156 IRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR----MN 211
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N ++ LC + A+ V + CYPD +Y IL++ C + + +A
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M KGS D+V Y L+ +C +G++ +A++ L + G + P H I
Sbjct: 272 KLLDEM----RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQ-PNVITHNI 326
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L C+ G ++ A+ L+++ L +G PS+ +++ + L +G + +L++M
Sbjct: 327 ILRSMCSTGRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 385
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ + Y L K+ +D A+E ++ + +G + P + YN LL LC G V
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY-PDIVTYNTLLTALCKDGKVDV 444
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AV L ++S + GC TY ++DGL + G+ A ++L+EM + P + TY+ L+
Sbjct: 445 AVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GL GK EA+ + ++ P+ ++S++ +C
Sbjct: 504 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 194/402 (48%), Gaps = 11/402 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ I Y ++G+++ A+ + L + N ++NT+L+ + KL+ A + R
Sbjct: 186 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
E + + +L++ C+ A+ + EM +G PD +Y++L+ G+C + R
Sbjct: 243 LQ-KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+EA L +M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 302 LDEAIKFLNNM----PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G + A ++ + + G P+ SY+ + E ++ + LD
Sbjct: 358 TFNILINFLCRQGL-LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M ++G +P +V Y L AL KDG VD A+E++ + KG P + YN ++ GL G
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVG 475
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ L +M ++ G + TY LV GL R+G+ EA + ++ P TY
Sbjct: 476 KTERAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 534
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
N ++ GLC + A+ +L MIS+ P + ++ L+ +
Sbjct: 535 NSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 47/381 (12%)
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L+ +V+ +LE Y ++ I +L+ C+ ++ A V + ++ G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRG-FCRIGKTKKATWVMEILEQSG 179
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD +Y++L+ G C ++ A +L M D+V Y T+L LCD GK+
Sbjct: 180 AVPDVITYNVLISGYCKSGEIDNALQVLDRM-------NVAPDVVTYNTILRTLCDSGKL 232
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ AM++L++ L+K C P + +Y+
Sbjct: 233 KQAMEVLDRQLQK---------------EC---------------------YPDVITYTI 256
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ E + + K+LDEMR KG P +V Y + + K+G +DEA++ + G
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V +NI+L+ +C G A L M ++ GC + T+ IL++ LCR G
Sbjct: 317 C-QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLCRQGLLGR 374
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A +LE+M + P +YN L+ G C K A+ +L+ M+S+ PDI +++L+
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 434
Query: 482 SVCCNTADLNVCRKTLEQLSS 502
++ C ++V + L QLSS
Sbjct: 435 AL-CKDGKVDVAVEILNQLSS 454
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 183/404 (45%), Gaps = 59/404 (14%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
KE YP+ Y +I + + + + +++D+M+ + + I + G
Sbjct: 245 KECYPDV----ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL---FLRSCYGWEVKSR 150
+L+EA+ N+ + C + N +L+ M + ++A +L + C
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC-----SPS 355
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L++ LC+ A+ + ++M GC P+ SY+ L+ G C +++++ A L
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M R G DIV Y TLL ALC GK+ A++IL ++ K
Sbjct: 416 IMVSR----GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK---------------- 455
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G P L +Y+ + L G+ K+LDEMR KG P
Sbjct: 456 --------------------GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMY 389
++ Y + ++ L ++G VDEA++ + ++G + P YN ++ GLC + + A+ +
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHD--LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553
Query: 390 LKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L M SK+ C TY IL++G+ +G EA +L E+ R
Sbjct: 554 LAYMISKR--CKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 197/423 (46%), Gaps = 13/423 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKN 105
Y +I +S I +V+D+M D V + T +RT +G+L +A+ +
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
Q C ++ L++ KES + A L L K + + N+L++ +C+
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKL-LDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D A+ M GC P+ +++I+++ +C+ R +A LL M +KG +
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML----RKGCSPSV 356
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + L+ LC QG + A+ ILEK+ G P S + L + ++ A ++
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGC-TPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ RG P + +Y+ + L +G++ ++L+++ +KG P L+ Y + L K G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ A+++++E KG P + Y+ L+ GL G A+ + + + +G N T
Sbjct: 476 KTERAIKLLDEMRRKG-LKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGLGIRPNAIT 533
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ GLC+ + A L M+ + P TY +LI G+ G EA+ L E+
Sbjct: 534 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 593
Query: 466 SQA 468
S+
Sbjct: 594 SRG 596
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I ++ G+ A+ L +
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 487
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++++L+ + +E K++ A I F G ++ + N +M LC+ R+
Sbjct: 488 RRKGLKPDIITYSSLVSGLSREGKVDEA-IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+D A+ M + C P +Y IL++G+ + EA LL + R + +K S E +
Sbjct: 547 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 606
Query: 226 VI 227
+
Sbjct: 607 AV 608
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 200/446 (44%), Gaps = 12/446 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T + + K + A K F+E + N Y ++I LS+ R+
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG--GCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M C + + + + G+L+EA L L + + Q +++L+K +
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480
Query: 126 VKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+E LF +S E ++++ LC+ R D A +FQ M +GC P
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVG-LCKTGRLDEACRIFQRMVSEGCKP 539
Query: 185 DRESYHILMKGLCNDR--RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
D +Y+IL+ GLC R R+ A LL+ + G D V Y L LC G++
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDL----EMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+++LE+ +G A + C G+ ++ A SL E + +GG P A+Y +
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ-VDRAVSLFQEMVRQGGAPDAAAYCCI 654
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L ++ + K DEM KG P++ Y A + AL G VDEA E + +G
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGE 714
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
V +V +Y+ L+ G C A A+ + M + G V T L DGL R G+ +A
Sbjct: 715 LVGSVMIYDALIHGFCKALKVDAALKLFEDMISR-GNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGL 448
+L+EM P T+ ++ GL
Sbjct: 774 QELLQEMAAGGSPPHAATFTAILDGL 799
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 207/489 (42%), Gaps = 80/489 (16%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
++++ +++ K TA+ F+ A E+ ++H+ Y ++ +L ++ + ++M
Sbjct: 87 SHVAAVLRSLKVTGTAISFFRWAGEQ-AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
F IR++AR + ++AV+ F+ + + C
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRC-------------------- 185
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYH 190
K + + +L+D LC+ + A VF EM G PDR +
Sbjct: 186 ----------------KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+++ L +R+ EA + F ++ + G D + Y T++ L G Q+A+++L+
Sbjct: 230 AMVRTLLKAKRVKEAREV----FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+L K +P+ +Y + L G
Sbjct: 286 MLAKAC------------------------------------VPTEVTYGILVNSLCKAG 309
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +++ M GF P+ V+Y + + K G + EA + +E MV+ + P V +
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE-MVEAGYRPDVITH 368
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+++ GLC +GN A ++M + GC N TY ++ GL + GR A R+++ M+
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+P TY L+ G C +G+ EA L+E+ + P++ ++SSLV +C +
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487
Query: 491 NVCRKTLEQ 499
N EQ
Sbjct: 488 NTLDDLFEQ 496
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 211/491 (42%), Gaps = 38/491 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P L T L + K A ++F E A P R ++ +M+ L ++ R+ E
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR---ALHTAMVRTLLKAKRVKE 243
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+EV QM+ + T I A+AG EA+ + N+ CV ++ L+
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 124 EMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K LE A LF + + G+ S I + L+ + R A +F EM G
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYT--SLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD ++ +++ GLC +A F + + G ++V Y T++ L G++
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAA----KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCP----CNDGEDIEGAKSLINEALIRGGIPSLAS 298
+A +I++ ++ G P S + +C C G ++ A L++E P+L
Sbjct: 418 NAFRIMKGMIAHGC-FPDSVTY---ICLLDGFCKLGR-LDEAAQLLDELDKCSSSPNLQL 472
Query: 299 YSAMAIDLYNEGRI-------VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
YS++ L + G + E K E G S+++ L K G +DEA
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV------GLCKTGRLDEAC 526
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV--AVMYLKKMSKQVGCVANGETYGIL 409
+ + MV P YNIL+ GLC + + V A L + + VG + + TY L
Sbjct: 527 RIF-QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL-EMVGYLPDAVTYTPL 584
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
GLC+ G A ++LEE R + V Y L GLC G+ AV +EM+ Q
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 470 LPDISVWSSLV 480
PD + + ++
Sbjct: 645 APDAAAYCCII 655
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 209/470 (44%), Gaps = 28/470 (5%)
Query: 29 KIFKEAKEKYP-----NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
K KEA+E + + + Y +MI L+++ E +V+D M +C + +
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LR 140
+ + +AG L A LF+ ++ + + +L+ K +++ A LF +
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ Y +V + +++D LC+ + A F+EM GC P+ +Y +++GL
Sbjct: 359 AGYRPDVITH----TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+ A ++ M G D V Y LL C G++ +A Q+L++ L K +P
Sbjct: 415 RVANAFRIMKGMI----AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE-LDKCSSSPN 469
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINE---ALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + + DG +E + E A P L ++ + L GR+ E +
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEACR 527
Query: 318 VLDEMRTKGFWPSLVMYEAKLAAL--FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILL 374
+ M ++G P Y + L ++ V+ A ++ + EMV ++P Y L
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG--YLPDAVTYTPLC 585
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G AV L++ S + G A+ Y L GLC G+ A + +EM+ +
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSR-GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P Y +I GL K +A + +EMI + + P ++ +++LV ++C
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA--GQLNEAVSLFKNLS 107
S+I L ++ R+ E + +M + C+ + + I R+ ++ A +L +L
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ L + K +++ A +L S GW + + + L LC +
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW--NADVVAYTALCTGLCYQGQ 628
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ +FQEM QG PD +Y ++ GL ++L +A M KG +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIG----KGQKPTVA 684
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ ALC G + +A E +L +G + + ++ A L +
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG +P+ + +++ L G+ + ++L EM G P + A L L K
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804
Query: 347 VDEALEVIEE 356
+ L++++E
Sbjct: 805 SGKLLKLVQE 814
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F +R AG+ A+ L + + + N V ++NT++ +++AA +
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMRE 544
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ + ++ C+ R D A+ VF EM +G P+ Y+ L+ G C+
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+ T LLY R+ ++G + Y L+ AL G+ +A +++E++ KGL AP
Sbjct: 605 GKLD--TALLYRD--RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL-AP 659
Query: 260 KSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I + C +G +++ A + RG ++ +Y+A+ L +G++ E DK+
Sbjct: 660 DVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 718
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DE +G P LV+Y A + + G +D A E++ E M K P YN L++GLC
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLC 777
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + +M+++ G + TY L+ G G +A R+ EM+ + + P +
Sbjct: 778 LLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 836
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN LI+GLC G+ +A ++EM+ PD S + SL+
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 193/422 (45%), Gaps = 30/422 (7%)
Query: 84 ATAIRTYARAGQLN------------------EAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
AT++R Y+R L+ A +LF ++ + T +FN +L+ +
Sbjct: 439 ATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHL 498
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYP 184
K A + LR + + N ++ C R AL + +EM + G P
Sbjct: 499 CSAGK-PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 553
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
++ +Y ++ G C R++EA + M + K + V+Y L+ CDQGK+ A
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTA 610
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++++ +G+ + + + DG E A L+ E +G P + +Y+ +
Sbjct: 611 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLAPDVFTYNILIN 669
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG + + ++ + M +G ++V Y A + AL K G V E ++ +E + +G
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG-IR 728
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +YN L+ +GN A + +M K+ + TY L+ GLC GR EA +
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARK 787
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++EM R P + TYN LI G G +A+ EM+++ P + +++L+ +C
Sbjct: 788 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 847
Query: 485 CN 486
N
Sbjct: 848 KN 849
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 1 MSVRWPRLLTPTYLSQI--IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
MS R R TY + I + K+ K+F EA + R + +Y ++I S S
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR--GIRPDLVLYNALINSHSTS 744
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
I E++ +M+ D + T +R G+++EA L +++ ++
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804
Query: 119 NTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
NTL+ + ++ A L +R+ + + N L+ LC+ + D A ++ +EM
Sbjct: 805 NTLISGYSMKGDVKDA--LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 862
Query: 178 DFQGCYPDRESYHILMKGLCND 199
G PD +Y L++GL +
Sbjct: 863 VENGITPDDSTYISLIEGLTTE 884
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 219/530 (41%), Gaps = 91/530 (17%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+ + Y +M+ L ++ R+ V+ + F A+ ++AG L A
Sbjct: 171 GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS-----------------C 142
F ++ Q T +++ L+ + K KL+ A + LR C
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIA-LGLLRDKNSQAGMFAFSSLLHGLC 289
Query: 143 YGWEVKSRIQSL------------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
++ IQ L N LM+ LCQ RR D A +F M GC D +Y+
Sbjct: 290 QAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
IL+KGLC RR+ EA + M +G ++V + TL+ LC+ G++ A ++ E+
Sbjct: 350 ILLKGLCKLRRIPEAYRHVELMR---RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYER 406
Query: 251 ILRKGLKAPKSRRHRI---DLCPCNDGEDIE----------------------------- 278
++ +P + LC D +E
Sbjct: 407 MVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMV 466
Query: 279 -----------------GAKSLINEAL------IRGGI-PSLASYSAMAIDLYNEGRIVE 314
++ +AL I G+ P + +++++ L E RI++
Sbjct: 467 QVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
V +G P++V Y + L K +DEAL+++ + + G TV Y+ ++
Sbjct: 527 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV-TYSTVV 585
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GL G AV+ L++M + GC+ + TY L+DG + R EA +L EML +
Sbjct: 586 DGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 644
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY L GLC G+ EAV L+ M ++ P+ +SS+V +C
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 214/483 (44%), Gaps = 19/483 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + K++ L A +FK A E+ R N Y+++I LS+ ++ E
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALER--GCRPNVVTYSTLIDGLSKMAKMDEAL 563
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M C ++T + + G++ +AV + + + C+ ++NTL+
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +L A + LR + + L LC+ R D A+ + M +GC P+
Sbjct: 624 FKRQRLREA-VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++ GLC R+ EA M + ++ Y L+ LC G+I +A
Sbjct: 683 AITYSSIVDGLCKAGRVTEALGYFEKM---ARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ LE+++R G + P I + D I+ L RG + +Y+AM
Sbjct: 740 EFLERMIRAG-RIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINA 798
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+G +L+EM+T G + V + + AL + +DEA+ +P
Sbjct: 799 YCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS-------IP 851
Query: 366 ----TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
YN L+ L + S A+ L+ M G + Y ++DGL + G
Sbjct: 852 EDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS-PDACNYMTVMDGLFKAGSPEV 910
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A+++L+EM R + P + TY ++I GL + A + EEM+ + PD V+SSL+
Sbjct: 911 AAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLID 970
Query: 482 SVC 484
+ C
Sbjct: 971 AFC 973
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 213/458 (46%), Gaps = 29/458 (6%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++S++ L +++R ++E I +K C F + + +A +++EA LF +
Sbjct: 281 FSSLLHGLCQAHR---LEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAA--HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C ++N LLK + K ++ A H+ +R G + + + L+ LC
Sbjct: 338 ESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG--CSPNVVTFSTLIQGLCNAG 395
Query: 166 RSDLALHVFQEM-DFQGCYPDRESYHILMKGLC---NDRRLNEATHLLYSMFWRISQK-- 219
R + A V++ M +G P+R +Y L++GLC + RRL + + WR S
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455
Query: 220 -GSGE-----------DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
S E +V Y TL+ L G ++DA+ +LE ++ GL + +
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C + + I A ++ AL RG P++ +YS + L ++ E ++L +M G
Sbjct: 516 DGLCKE-QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 574
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ V Y + L K G +++A+ V+ +M +P YN L+ G AV
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAV-VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 633
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L++M + G + TY L GLCR GRF EA +L+ M R P TY+ ++ G
Sbjct: 634 GLLREM-LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 692
Query: 448 LCSIGKQYEAVMWLEEMI-SQAKLPDISVWSSLVASVC 484
LC G+ EA+ + E+M + P + +S+L+ +C
Sbjct: 693 LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 730
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 213/464 (45%), Gaps = 36/464 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK-GDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + RI E ++ M+ + C F+T I+ AG++N+A +++
Sbjct: 347 TYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYER 406
Query: 106 LSQFNCVNWTQ-SFNTLLKEMVKES---KLEAAHILFL----RSCYGWEVKS-------- 149
+ ++ + ++ LL+ + K +LE L RS W + S
Sbjct: 407 MVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMV 466
Query: 150 -----RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + N L+ L + AL + + M G PD +++ ++ GLC ++R+ +
Sbjct: 467 QVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A +++F R ++G ++V Y TL+ L K+ +A+Q+L K++ G +A +
Sbjct: 527 A----HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA-----N 577
Query: 265 RIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ DG +E A ++ + G +P +Y+ + + R+ E +L
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM GF PS+V Y L + G DEA+E+++ +G P Y+ ++ GLC A
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC-APNAITYSSIVDGLCKA 696
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ Y +KM++ + Y L+DGLC+ GR EA LE M+ P V T
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT 756
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++LI GLC G+ + M + DI +++++ + C
Sbjct: 757 FSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYC 800
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 170/370 (45%), Gaps = 7/370 (1%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++NTL+ + K + A + L + + + N ++D LC+ +R A +VF+
Sbjct: 475 TYNTLVTGLSKSGMVRDA-LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
+GC P+ +Y L+ GL +++EA LL M + G + V Y T++ L
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELGCRANTVTYSTVVDGLL 589
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G+++DA+ +L ++ G P + + + + + A L+ E L G PS+
Sbjct: 590 KVGRMEDAVVVLRQMRDAGC-LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L GR E ++LD M +G P+ + Y + + L K G V EAL E+
Sbjct: 649 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
P V Y+ L+ GLC AG A +L++M + G + + T+ IL++GLC
Sbjct: 709 MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIR-AGRIPDVVTFSILINGLCDA 767
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR + M R + YN +I C G+ A LEEM + +
Sbjct: 768 GRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTH 827
Query: 477 SSLVASVCCN 486
++ ++C N
Sbjct: 828 GIVIKALCGN 837
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 183/413 (44%), Gaps = 37/413 (8%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++N L+ + K ++ A F R + + + + + ++D LC+ D + +E
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAF-RKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +GC P+ +Y+ L+ L R EA +S+ R++ G +++ + ++ LC
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEA----FSLLERMAANGCPPELITFGLIIKGLC 117
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+G+I+ A +++++++ +G P H + L + ++ A + L+ G P
Sbjct: 118 KEGEIEAAFRVVDEMVDRGF-VPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ M LY GR+ VL + P++ + + L K G + A E +
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF-D 235
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG------------------ 398
M + P Y+ L+ GLC AG +A+ L+ + Q G
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLE 295
Query: 399 ----------CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
CV N + L++GLC+ R EA + + M V TYN+L++GL
Sbjct: 296 EAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355
Query: 449 CSIGKQYEAVMWLEEM-ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
C + + EA +E M ++ P++ +S+L+ + CN +N + E++
Sbjct: 356 CKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGL-CNAGRVNQAWEVYERM 407
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 5/261 (1%)
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V Y L+ LC G++ DA K ++ G + + C D E +G K L+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCK-LL 59
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E RG P+ +Y+ + L +GR E +L+ M G P L+ + + L K+
Sbjct: 60 EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G ++ A V+ +EMV FVP V ++ +LL LC+ G A + +++ +G +
Sbjct: 120 GEIEAAFRVV-DEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV-LLIGFTPDAV 177
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSY-WPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY +VDGL + GR LEA+ ++ ++L S+ P V T+ + + GL G A + +
Sbjct: 178 TYNTMVDGLYKAGR-LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 464 MISQAKLPDISVWSSLVASVC 484
M P+ + +L+ +C
Sbjct: 237 MPQTGVSPNTVTYDALIDGLC 257
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 192/464 (41%), Gaps = 24/464 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L K++ A+ + +E E + + Y ++ L S R E
Sbjct: 611 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEA--GFHPSVVTYTTLCHGLCRSGRFDEAV 668
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN-WTQSFNTLLKE 124
E++D M C +++ + +AG++ EA+ F+ +++ V +++ L+
Sbjct: 669 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K +++ A+ R + + + ++L++ LC R D L +F M +GC
Sbjct: 729 LCKAGRIDEAYEFLERMIRAGRIPD-VVTFSILINGLCDAGRIDTGLELFCGMAERGCKA 787
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y+ ++ C + A Y++ + G ++ V + ++ ALC +I +A
Sbjct: 788 DIYAYNAMINAYCLKGEFSAA----YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843
Query: 245 MQILEKILRKGLKAPKSRRHRID----LCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ I P+ R I + E A L+ + GG P +Y
Sbjct: 844 VSYFHSI-------PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYM 896
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L+ G K+L EMR++G P L Y ++ L K + A + EE M++
Sbjct: 897 TVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEE-MLR 955
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P VY+ L+ C A A K+ + G Y +VD LC++
Sbjct: 956 KNLKPDAIVYSSLIDAFCKADKVDDA----WKLLRSSGIEPTITMYSTMVDSLCKNRGTD 1011
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+A V+ EM ++ P + + L + G+ EAV + ++
Sbjct: 1012 KALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 188/477 (39%), Gaps = 71/477 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L + I V+D+M + + G+++EA F+ +
Sbjct: 108 TFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++NT++ + K +LEAA ++ + + + + + +D L +
Sbjct: 168 LLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPT-VFTFTIAVDGLSKAGN 226
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A F M G P+ +Y L+ GLC +L+ A LL K S +
Sbjct: 227 LTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL-------RDKNSQAGMF 279
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +LL LC ++++A+Q+L+ + PC
Sbjct: 280 AFSSLLHGLCQAHRLEEAIQLLKAM------------------PC--------------- 306
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+P++ ++++ L R+ E ++ D M+ G ++ Y L L K
Sbjct: 307 ------VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA +E P V ++ L++GLC+AG A ++M G N TY
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTY 420
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIR-----SYW----------------PCVETYNVLI 445
L++GLC+ G + E+ML R S W P + TYN L+
Sbjct: 421 AFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLV 480
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL---NVCRKTLEQ 499
GL G +A+ LE MI PD+ ++S++ +C L NV ++ LE+
Sbjct: 481 TGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 537
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 230/522 (44%), Gaps = 47/522 (9%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++Q P AL++ A + ++ VY +I L + MK ++ +M+ + +
Sbjct: 48 LREQPDPDAALRMLNAALAR-DDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQ 106
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNCVNWTQSFNTLLKEMVKESKLEAAH 135
K V + + +Y ++AV L N Q F T +N LL +V+ SK++
Sbjct: 107 VKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK--- 163
Query: 136 ILFLRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
L S Y +K + + N LM LC+ + A+ + +EM +G PD ++
Sbjct: 164 --LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 192 LMKGLCNDRRLNEA------------------THLLYSMFWRISQ-------------KG 220
LM+G + + A ++L + + ++ + G
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D + Y T + LC + A+++++ ++++G + + C C +G+ +E A
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ-LEEA 340
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K ++N+ + RG +P + +++ + L R+ E + ++ KG P + + + A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G AL + EE M P YN L+ LC G A+ LK M + GC
Sbjct: 401 LCKVGDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCP 458
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++DGLC+ R EA V ++M ++ T+N LI GLC K +A
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ +MIS+ P+ ++S++ C D+ LE +++
Sbjct: 519 INQMISEGLQPNNITYNSILTHY-CKQGDIKKAADILETMTA 559
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 16/442 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++ +L E +++ ++ V +M + F T ++ RA Q+ AV + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLC 162
S +F TL++ V+E +EAA + R C +V ++N+L++ C
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV-----TVNVLINGYC 262
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R + AL Q+ G PD+ +Y+ + GLC + + A ++ M Q+G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV----QEGHD 318
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ Y ++ LC G++++A IL +++ +G + + + C G +E A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALD 377
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + ++G P + +++ + L G ++ +EM+ G P V Y + L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G + +AL+++++ G T+ YN ++ GLC A +M Q G N
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRN 495
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+DGLC+D + +A ++ +M+ P TYN ++ C G +A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M + D+ + +L+ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 190/434 (43%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L +++ + +V+D M + + + + + GQL EA + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ +FNTL+ + ++LE A + R V + + N+L++ LC+
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LAL +F+EM GC PD +Y+ L+ LC+ +L +A LL M G +
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM----ESTGCPRSTI 462
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ +G+ R+ I DG
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-----RNAITFNTLIDG------------ 505
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + +I + +++++M ++G P+ + Y + L K G
Sbjct: 506 -------------------LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A +++E M F V Y L+ GLC AG + VA+ L+ M + G + Y
Sbjct: 547 IKKAADILET-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK-GMRPTPKAY 604
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA ++ EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 466 SQAKLPDISVWSSL 479
+ +P+ S + L
Sbjct: 665 DKGFIPEFSSFRML 678
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 200/473 (42%), Gaps = 43/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++++ ++++M ++ F T ++ + G + A+ + +
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + N L+ K ++E A + +++ + + N ++ LCQ
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDA-LGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V M +G PD +Y+I++ LC + +L EA +L M R G DI
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR----GCLPDIT 357
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ ALC ++++A+ + ++ KG+ +P I + D A L E
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGV-SPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 287 ALIRGGIPSLASYSAM------------AIDL---------------YN--------EGR 311
G P +Y+ + A+DL YN + R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E ++V D+M +G + + + + L KD +D+A E+I + M+ P YN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ-MISEGLQPNNITYN 535
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+L C G+ A L+ M+ G + TYG L++GLC+ GR A +VL M I
Sbjct: 536 SILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P + YN +++ L +A+ EM + PD + + +C
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F +R AG+ A+ L + + + N V ++NT++ +++AA +
Sbjct: 42 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMRE 97
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ + ++ C+ R D A+ VF EM +G P+ Y+ L+ G C+
Sbjct: 98 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+ T LLY R+ ++G + Y L+ AL G+ +A +++E++ KGL AP
Sbjct: 158 GKLD--TALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL-AP 212
Query: 260 KSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I + C +G +++ A + RG ++ +Y+++ L +G++ E DK+
Sbjct: 213 DVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 271
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DE +G P LV+Y A + + G +D A E++ E M K P YN L++GLC
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLC 330
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + +M+K+ G + TY L+ G G +A R+ EM+ + + P +
Sbjct: 331 LLGRVDEARKLIDEMTKR-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 389
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN LI+GLC G+ +A ++EM+ PD S + SL+
Sbjct: 390 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 183/389 (47%), Gaps = 12/389 (3%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A +LF ++ + T +FN +L+ + K A + LR + + N ++
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGK-PARALELLRQM----PRPNAVTYNTVI 79
Query: 159 DVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
C R AL + +EM + G P++ +Y ++ G C R++EA + M +
Sbjct: 80 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
K + V+Y L+ CDQGK+ A+ ++++ +G+ + + + DG
Sbjct: 140 VK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 196
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A L+ E +G P + +Y+ + EG + + ++ + M +G ++V Y +
Sbjct: 197 E-AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ AL K G V E ++ +E + +G P + +YN L+ +GN A + +M K+
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY L+ GLC GR EA ++++EM R P + TYN LI G G +A
Sbjct: 315 -IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDA 373
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ EM+++ P + +++L+ +C N
Sbjct: 374 LRIRNEMMNKGFNPTLLTYNALIQGLCKN 402
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 51/429 (11%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-V 82
P AL++ ++ R N Y ++I R+ +++ +M+ +
Sbjct: 57 PARALELLRQMP------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 110
Query: 83 FATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I + + G+++EAV +F L++ +N L+ + KL+ A +L+
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA-LLYRDR 169
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + NLL+ L R A + +EM +G PD +Y+IL+ G C +
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A + F +S++G +V Y +L++AL +G++Q+
Sbjct: 230 VKKALEI----FENMSRRGVRATVVTYTSLIYALSKKGQVQET----------------- 268
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
L +EA+ RG P L Y+A+ G I +++ E
Sbjct: 269 -------------------DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P V Y + L G VDEA ++I+E M K P + YN L+ G G
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE-MTKRGIQPDLVTYNTLISGYSMKG 368
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ +M + G TY L+ GLC++G+ +A +++EM+ P TY
Sbjct: 369 DVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 427
Query: 442 NVLIRGLCS 450
LI GL +
Sbjct: 428 ISLIEGLTT 436
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 1 MSVRWPRLLTPTYLSQI--IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
MS R R TY S I + K+ K+F EA + R + +Y ++I S S
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR--GIRPDLVLYNALINSHSTS 297
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
I E++ +M+ D + T +R G+++EA L +++ ++
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357
Query: 119 NTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
NTL+ + ++ A L +R+ + + N L+ LC+ + D A ++ +EM
Sbjct: 358 NTLISGYSMKGDVKDA--LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415
Query: 178 DFQGCYPDRESYHILMKGLCND 199
G PD +Y L++GL +
Sbjct: 416 VENGITPDDSTYISLIEGLTTE 437
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 230/522 (44%), Gaps = 47/522 (9%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++Q P AL++ A + ++ VY +I L + MK ++ +M+ + +
Sbjct: 48 LREQPDPDAALRMLNAALAR-DDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQ 106
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNCVNWTQSFNTLLKEMVKESKLEAAH 135
K V + + +Y ++AV L N Q F T +N LL +V+ SK++
Sbjct: 107 VKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK--- 163
Query: 136 ILFLRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
L S Y +K + + N LM LC+ + A+ + +EM +G PD ++
Sbjct: 164 --LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 192 LMKGLCNDRRLNEA------------------THLLYSMFWRISQ-------------KG 220
LM+G + + A ++L + + ++ + G
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D + Y T + LC + A+++++ ++++G + + C C +G+ +E A
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ-LEEA 340
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K ++N+ + RG +P + +++ + L R+ E + ++ KG P + + + A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G AL + EE M P YN L+ LC G A+ LK M + GC
Sbjct: 401 LCKVGDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCP 458
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++DGLC+ R EA V ++M ++ T+N LI GLC K +A
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ +MIS+ P+ ++S++ C D+ LE +++
Sbjct: 519 INQMISEGLQPNNITYNSILTHY-CKQGDIKKAADILETMTA 559
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 16/442 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++ +L E +++ ++ V +M + F T ++ RA Q+ AV + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLC 162
S +F TL++ V+E +EAA + R C +V ++N+L++ C
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV-----TVNVLINGYC 262
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R + AL Q+ G PD+ +Y+ + GLC + + A ++ M Q+G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV----QEGHD 318
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ Y ++ LC G++++A IL +++ +G + + + C G +E A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALD 377
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + ++G P + +++ + L G ++ +EM+ G P V Y + L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G + +AL+++++ G T+ YN ++ GLC A +M Q G N
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRN 495
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+DGLC+D + +A ++ +M+ P TYN ++ C G +A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M + D+ + +L+ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 189/434 (43%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L +++ + +V+D M + + + + + GQL EA + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ +FNTL+ + ++LE A + R V + + N+L++ LC+
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LAL +F+EM GC PD +Y+ L+ LC+ +L +A LL M G +
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM----ESTGCPRSTI 462
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ +G+ R+ I DG
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-----RNAITFNTLIDG------------ 505
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + +I + ++++M ++G P+ + Y + L K G
Sbjct: 506 -------------------LCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A +++E M F V Y L+ GLC AG + VA+ L+ M + G + Y
Sbjct: 547 IKKAADILET-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK-GMRPTPKAY 604
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA ++ EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 466 SQAKLPDISVWSSL 479
+ +P+ S + L
Sbjct: 665 DKGFIPEFSSFRML 678
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 199/473 (42%), Gaps = 43/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++++ ++++M ++ F T ++ + G + A+ + +
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + N L+ K ++E A + +++ + + N ++ LCQ
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDA-LGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V M +G PD +Y+I++ LC + +L EA +L M R G DI
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR----GCLPDIT 357
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ ALC ++++A+ + ++ KG+ +P I + D A L E
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGV-SPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 287 ALIRGGIPSLASYSAM------------AIDL---------------YN--------EGR 311
G P +Y+ + A+DL YN + R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E ++V D+M +G + + + + L KD +D+A +I + M+ P YN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQ-MISEGLQPNNITYN 535
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+L C G+ A L+ M+ G + TYG L++GLC+ GR A +VL M I
Sbjct: 536 SILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P + YN +++ L +A+ EM + PD + + +C
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 210/471 (44%), Gaps = 44/471 (9%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
+IK++K P AL+IF E+ + HN Y+++I L+++ + + ++ QM ++
Sbjct: 64 NLIKREKDPQHALEIFNMVGEQ-KGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYET 122
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAA 134
C+ +++F ++ + ++ + +F + + ++ +T L +V+ +++ A
Sbjct: 123 CKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLA 182
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILM 193
L +V+ N+L+ C+ + AL V EM + YP+ +Y L+
Sbjct: 183 QKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLI 242
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC + RL EA L M +S+ D + Y L+ C GK A +I+E +
Sbjct: 243 DGLCGNGRLKEAIELFEEM---VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRS 299
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
G C+ P++ +YS + EGR+
Sbjct: 300 NG---------------CD---------------------PNVFNYSVLMNGFCKEGRLE 323
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +V DEM++ G P V Y + G +DEA+E++ +EM + +N+L
Sbjct: 324 EAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELL-KEMTEMKCKADAVTFNVL 382
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
LKGLC G A+ L+ ++ + G N +Y I+++ LC+ G ++ +L ML R
Sbjct: 383 LKGLCREGRFDEALRMLENLAYE-GVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRG 441
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P T N L+ LC G AV L + P+ W+ L+ +C
Sbjct: 442 FVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYIC 492
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM--RTKGFWPSLVMYEAKLAALFKDGMV 347
+G + A+YS + L + D +L +M T F ++ + K +K +
Sbjct: 86 KGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMK--HFYKSSLH 143
Query: 348 DEALEVIE--EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ LE+ + +V+ P+++ + L L ++ +A L +++ + N
Sbjct: 144 ERVLEMFYAIQPIVREK--PSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCI 201
Query: 406 YGILVDGLCRDGRFLEASRVLEEML-IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ ILV C+ G A V+ EM R +P V TY+ LI GLC G+ EA+ EEM
Sbjct: 202 FNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEM 261
Query: 465 ISQAK-LPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+S+ + LPD +S L+ C+ + RK +E + S
Sbjct: 262 VSKDQILPDALTYSVLIKGF-CHGGKADRARKIMEFMRS 299
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 15/425 (3%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
RI E +++D+M + + R G+++EA L + N V FN
Sbjct: 302 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFN 357
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
TL+ V +L+ A + S I + N L+ LC+ A + EM
Sbjct: 358 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+GC P+ +Y IL+ C + RL EA ++L M S KG + V Y L+ ALC
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEM----SGKGLALNAVGYNCLISALCKDE 473
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
K+QDA+ + + KG K + + LC N E+ A L + L+ G I +
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE---ALGLYQDMLLEGVIANTI 530
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + G + E K++++M +G + Y + AL + G +++ L + E+
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M KG P NIL+ GLC GN A+ +L+ M + G + TY L++GLC+ G
Sbjct: 591 MSKG-LNPNNISCNILINGLCRTGNIQHALEFLRDMIHR-GLTPDIVTYNSLINGLCKTG 648
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA + +++ + P TYN LI C G +A + L + +P+ W
Sbjct: 649 RAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 708
Query: 478 SLVAS 482
LV++
Sbjct: 709 ILVSN 713
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 144/599 (24%), Positives = 237/599 (39%), Gaps = 123/599 (20%)
Query: 2 SVRWPRLLTP-------TYLSQIIKKQ-----KSPL---TALKIFKEAKEKYPNYRHNGP 46
W RLL P T L++I Q + PL T++++F+ A + Y H
Sbjct: 54 GTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQ-KGYCHMFD 112
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +I L + + ++ QMK + ++S+F ++ Y RAG +A L ++
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 107 -SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
++C +S+N +L ++ + + +F + + + ++M LC
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM-LSKGISPTVYTFGVVMKALCLVN 231
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHIL--------------------------------- 192
D A + ++M GC P+ Y L
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291
Query: 193 --MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+ GLC R++EA L+ M R G + Y L+ LC GK+ +A +L K
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLR----GFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 347
Query: 251 ------ILRKGLKAPKSRRHRID---------LCPCNDGEDI----------------EG 279
+L L R R+D + G DI
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A+ L+NE I+G P++ +Y+ + EGR+ E VLDEM KG + V Y ++
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA----------------GNS 383
AL KD V +AL + + KG P + +N L+ GLC G
Sbjct: 468 ALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 384 AVAVMY-------LKKMSKQ-----------VGCVANGETYGILVDGLCRDGRFLEASRV 425
A + Y L++ + Q GC + TY L+ LCR G + +
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E+M+ + P + N+LI GLC G A+ +L +MI + PDI ++SL+ +C
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 645
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 193/419 (46%), Gaps = 21/419 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N Y ++ L ++ E + +++++ + +F T I Y G+L+EA
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV----VLFNTLINGYVSRGRLDEAK 373
Query: 101 S-LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLN 155
+ + +++ C ++NTL+ + K+ L +A L ++ C + + +
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC-----EPNVITYT 428
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+D C+ R + A +V EM +G + Y+ L+ LC D ++ +A +MF
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA----LNMFGD 484
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+S KG DI + +L+F LC K ++A+ + + +L +G+ A + + G
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E K L+N+ L RG +Y+ + L G I +G + ++M +KG P+ +
Sbjct: 545 MQEALK-LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 603
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L + G + ALE + + + +G P + YN L+ GLC G + A+ K+
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY L+ C++G F +A +L + + P T+ +L+ G Q
Sbjct: 663 E-GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 720
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 220/451 (48%), Gaps = 29/451 (6%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
YPN Y MI L + R E E+ ++M + E +++ I AG ++
Sbjct: 254 YPNV----VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNID 309
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
AV ++K + + + V + N +L + K++ + L++ G E + S N+L
Sbjct: 310 GAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM--VMGKENCQTVVSYNIL 367
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ L + + + A+ +++ + +GC P+ +Y +L+ GLC + RLN+A + ++ +
Sbjct: 368 IKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKI-----FKEA 422
Query: 218 QKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND--- 273
+ G G+ D Y +++ LC +G++ +A+ I+ ++ ++G +++D CN
Sbjct: 423 EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG--------YKLDPHVCNPLIN 474
Query: 274 ----GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+E A + E +G P++ SY+ + L R E + EM K + P
Sbjct: 475 GFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKP 534
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++ + L ++ ++ AL + ++ + KG F P + +YNIL+ GLC A+
Sbjct: 535 DMITCSLLMDGLCQEKKIEMALNLWQQALDKG-FKPDITMYNILMHGLCSVCKLEDALQL 593
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M K+ CV N T L++GL + + +AS + + +L P + +YN+ I+GLC
Sbjct: 594 YSHM-KRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLC 652
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
S + +A+ +L + +++ LP W+ LV
Sbjct: 653 SCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 234/538 (43%), Gaps = 87/538 (16%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR-ITEMKEVIDQMKGDSCECK 79
+K+PL+AL +F+ A N H+ V+ ++ L+ +R ++ + ++D +K C CK
Sbjct: 23 EKNPLSALSLFESASR---NKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCK 79
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ V T I+ YA+ N+A+ F+N+ F C +S+NTLL V+ ++ + A F
Sbjct: 80 EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAES-F 138
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQ---------------------------------CR 165
R +V +Q+ N+L+ + C+ +
Sbjct: 139 SRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVK 198
Query: 166 RSDL--ALHVFQEMDFQG------------------------------------CYPDRE 187
DL AL VF EM +G YP+
Sbjct: 199 VGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+I++ GLC R +E+ + W R+++ +D+ Y +L+ LC+ G I A++
Sbjct: 259 TYNIMINGLCKCGRFDESLEI-----WERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVR 313
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ ++I+ L + + C G+ E + + + + ++ SY+ + L
Sbjct: 314 VYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM--VMGKENCQTVVSYNILIKGL 371
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+ G++ E + + + KG P Y + L K+G +++AL++ +E G
Sbjct: 372 FENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAE-DGPGKLD 430
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
Y+ ++ GLC G A+ + +M K+ G + L++G R + +A
Sbjct: 431 AYAYSSMVDGLCKEGRMDEAISIVNQMDKR-GYKLDPHVCNPLINGFVRASKLEDAINFF 489
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM + P + +YN LI+GLC + EA +++EM+ + PD+ S L+ +C
Sbjct: 490 REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLC 547
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 204/438 (46%), Gaps = 42/438 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + E + ++ +MK + + + T + YAR G + +A + + +
Sbjct: 246 TYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ F ++N L + + K++ A L V + + N L+D +C+R
Sbjct: 306 TAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQR 365
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S AL++ +EM +G +++I++KGLC + +L EA L M +++G D++
Sbjct: 366 SSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMM----TEEGLTPDVI 421
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ A C G + A ++++++R GLK +D N
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLK--------MDTFTLN-------------- 459
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +L E R E +++L +GF P V Y +AA FK+
Sbjct: 460 --------------TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ AL + +EM+K P++ YN L+KGL G A+ L ++ ++G V + TY
Sbjct: 506 PEPAL-CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNEL-MEMGLVPDDTTY 563
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++ C++G +A + +M+ S+ P V T N L+ GLC G+ +A+ E +
Sbjct: 564 NIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVE 623
Query: 467 QAKLPDISVWSSLVASVC 484
+ K D+ +++L+ ++C
Sbjct: 624 KGKKVDVITYNTLIQALC 641
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 186/438 (42%), Gaps = 47/438 (10%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKE-SKLEAAHILFLRSCY 143
A+ TYAR + A L + + CV + Q+ N +L + + S A + S
Sbjct: 142 ALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI 201
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + NLL+ C AL +M G PD +Y+ L+ C L
Sbjct: 202 ALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLG 261
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL R+ ++G Y TL+ A G I+ A ++E + G +
Sbjct: 262 EARTLL----ARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTY 317
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G+ E K + + + + GI P + +Y+ + + R + +L+E
Sbjct: 318 NVLAAGLCQAGKVDEAFK--LKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
MR KG SLV + + L ++G ++EAL + E M + P V YN L+ C AG
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRL-EMMTEEGLTPDVITYNTLIDASCKAG 434
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL--------------- 426
N A A + + +M + G + T L+ LC++ R+ EA +L
Sbjct: 435 NVAKAFVLMDEMVRS-GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493
Query: 427 --------------------EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+EM+ R P + TYN LI+GL ++GK EA+ L E++
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME 553
Query: 467 QAKLPDISVWSSLVASVC 484
+PD + ++ ++ + C
Sbjct: 554 MGLVPDDTTYNIIIHAYC 571
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 178/440 (40%), Gaps = 48/440 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + R ++ ++++M+ + ++ R GQL EA+ + +
Sbjct: 352 TYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMM 411
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ ++NTL+ K + A +L +RS +K +LN L+ LC+
Sbjct: 412 TEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG----LKMDTFTLNTLLYNLCK 467
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + A + + +G PD SY +M + + A L M R
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS--- 524
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
I Y TL+ L GK+ +A+ L +++ GL + + I C +G D+E A
Sbjct: 525 -ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG-DLEKAFQF 582
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
N+ + P + + + + L GR+ + K+ + KG ++ Y + AL K
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ------- 396
D VD AL + V+G P V YN+LL L +AG S A L K+++
Sbjct: 643 DNDVDTALRFFADMEVRG-LQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRF 701
Query: 397 --------VGCVANG--------------------ETYGILVDGLCRDGRFLEASRVLEE 428
V V G E+Y + LC G+ EA VL+E
Sbjct: 702 FYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDE 761
Query: 429 MLIRSYWPCVETYNVLIRGL 448
M+ + TY L+ GL
Sbjct: 762 MMQKGMSVDNSTYITLMEGL 781
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 232/504 (46%), Gaps = 45/504 (8%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE-MKEVIDQMKGDSC 76
+++Q P AL++ A + ++ VY +I L + + MK ++ +M+ +
Sbjct: 51 LREQPDPDAALRMLNAALAR-EDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGH 109
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS----FNTLLKEMVKESKLE 132
+ + V + + +YAR +AV L L+Q + + Q+ +N LL +V+ SK++
Sbjct: 110 QVRVGVVHSFLESYARQQLFVDAVDLV--LNQLDPLFGIQADTVVYNHLLNVLVEGSKMK 167
Query: 133 AAHILFLRSCYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
++ S G +K + + N LM LC+ + A+ + +EM G PD ++
Sbjct: 168 LLETVY--SEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 192 LMKGLCNDRRLNEA------------------THLLYSMFWRISQ-------------KG 220
LM+G + + A ++L + + ++ + G
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANG 285
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D + Y T + LC G + A+++++ ++++G + + C C +G+ +E A
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ-LEEA 344
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K ++N+ + RG +P + +++ + + L + R+ E + ++ KG P + + + A
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G AL + EE G P YN L+ LC G A+ LK+M + GC
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKEM-ESAGCP 462
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++DGLC+ R EA V ++M ++ T+N LI GLC + +A
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+ +MIS+ P+ ++S++ C
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYC 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 207/438 (47%), Gaps = 8/438 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++ +L E +++ ++ V +M + F T ++ RA Q+ AV + + +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S +F TL++ V+E ++AA + R +++ ++N+L++ C+ R
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV-TVNVLINGYCKLGR 270
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL Q+ G PD+ +Y+ + GLC + + A ++ M Q+G D+
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV----QEGHDPDVF 326
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ LC G++++A IL +++ +G + + + + C+ G +E A L +
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCS-GNRLEEALDLARQ 385
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
++G P + +++ + L G ++ +EM++ G P V Y + L G
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +AL++++E G TV YN ++ GLC A +M Q G N T+
Sbjct: 446 LGKALDLLKEMESAGCPRSTV-TYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAITF 503
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC+D R +A++++ +M+ P TYN ++ C G +A L+ M +
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 467 QAKLPDISVWSSLVASVC 484
D+ + +L+ +C
Sbjct: 564 NGFEVDVVTYGTLINGLC 581
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 191/434 (44%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L ++ + +V+D M + + + + + GQL EA + +
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C+ +FNTL+ + ++LE A + R + + + N+L++ LC+
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEA-LDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LAL +F+EM GC PD +Y+ L+ LC+ +L +A LL M G V
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM----ESAGCPRSTV 466
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ +G+ R+ I DG
Sbjct: 467 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-----RNAITFNTLIDG------------ 509
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + RI + ++++ +M ++G P+ + Y + L K G
Sbjct: 510 -------------------LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A ++++ M F V Y L+ GLC AG + VA+ L+ M + G A + Y
Sbjct: 551 IKKAADILQT-MTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK-GMRATPKAY 608
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA +L EM+
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668
Query: 466 SQAKLPDISVWSSL 479
+ +P+ S + L
Sbjct: 669 DKGFIPEFSSFRML 682
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 198/473 (41%), Gaps = 43/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++++ ++++M ++ F T ++ + G + A+ + +
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + N L+ K ++E A + +++ + + N ++ LCQ
Sbjct: 247 LEMGCSPTKVTVNVLINGYCKLGRVEDA-LGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V M +G PD +Y+I++ LC + +L EA +L M R G DI
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER----GCLPDIT 361
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ ALC ++++A+ + ++ KGL +P I + D + A L E
Sbjct: 362 TFNTLIVALCSGNRLEEALDLARQVTLKGL-SPDVYTFNILINALCKVGDPQLALRLFEE 420
Query: 287 ALIRGGIPSLASYSAM------------AIDLYNEG-----------------------R 311
G P +Y+ + A+DL E R
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E ++V D+M +G + + + + L KD +D+A ++I + M+ P YN
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ-MISEGLQPNNITYN 539
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+L C G+ A L+ M+ G + TYG L++GLC+ GR A ++L M I
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + YN +I+ L +A+ EM + PD + + +C
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLC 651
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 312 IVEGDK------VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+VEG K V EM +G P +V + + AL + V A+ ++EE M P
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE-MSSSGVAP 218
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ L++G + G S A + +K ++GC T +L++G C+ GR +A
Sbjct: 219 DETTFTTLMQGFVEEG-SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGY 277
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+++ + + P TYN + GLC G A+ ++ M+ + PD+ ++ +V +C
Sbjct: 278 IQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 337
Query: 486 N 486
N
Sbjct: 338 N 338
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 190/399 (47%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + R QL A+++ + + + ++LL ++ A + + + E
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA-VALVDQMFVME 180
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N L+ L ++ A+ + M +GC PD +Y ++ GLC ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 207 HLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M +KG E D+VIY T++ ALC+ + DA+ + ++ KG++ +
Sbjct: 241 SLLKKM-----EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C CN G A L+++ + R P++ ++SA+ EG++VE +K+ DEM +
Sbjct: 296 LIRCLCNYGR-WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P + Y + + +DEA + E + K F P V YN L+KG C A
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEE 413
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ ++MS Q G V N TY L+ GL + G A ++ ++M+ P + TY++L+
Sbjct: 414 GMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A++ E + PDI ++ ++ +C
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 204/435 (46%), Gaps = 14/435 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI+E ++DQM + F T I + +EAV+L +
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + ++D LC + +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EMD +G P+ +Y+ L++ LCN R ++A+ LL M ++ ++V +
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 328
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 387
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + R+ EG ++ EM +G + V Y + LF+ G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A ++ ++ MV P + Y+ILL GLC G + V YL+K + + T
Sbjct: 448 MAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PDIYT 502
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V Y +I G C G + EA EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 466 SQAKLPDISVWSSLV 480
LP+ +++L+
Sbjct: 563 EDGTLPNSGTYNTLI 577
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV LF + Q + FN LL + K +K + L R + + S
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER-MQNLRISYDLYSY 118
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS L AL V +M G PD + L+ G C+ +R++EA L+ M
Sbjct: 119 NILIN--CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F Q + V + TL+ L K +A+
Sbjct: 177 FVMEYQPNT----VTFNTLIHGLFLHNKASEAV--------------------------- 205
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+LI+ + RG P L +Y + L G I +L +M +V
Sbjct: 206 ---------ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + AL V++AL + E KG P V YN L++ LC+ G + A L
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 316 MIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +++L+ C
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 18/361 (4%)
Query: 129 SKLEAAHILF-LRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
++L A LF LR Y ++ + ++ S N+L+D+ + D A+ +F EM
Sbjct: 24 AQLRKASPLFSLRGVYFSAASYDYREKL-SRNVLLDL-----KLDDAVDLFGEMVQSRPL 77
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P ++ L+ + + + L+ S+ R+ D+ Y L+ C + ++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFD----LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL 133
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ +L K+++ G + + C+ G+ I A +L+++ + P+ +++ +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCH-GKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ + E ++D M +G P L Y + L K G +D AL ++++ M KG
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKI 251
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
V +Y ++ LC+ N A+ +M + G N TY L+ LC GR+ +AS
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R+L +M+ R P V T++ LI GK EA +EMI ++ PDI +SSL+
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 484 C 484
C
Sbjct: 371 C 371
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 148/307 (48%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K+ + A K++ E ++ + + Y+S+I +R+ E K
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ + M C + T I+ + +A ++ E + LF+ +SQ V T ++NTL++ +
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + A +F + V I + ++L+D LC+ + + AL VF+ + PD
Sbjct: 441 FQAGDCDMAQKIF-KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I+++G+C ++ + + +F +S KG +++IY T++ C +G ++A
Sbjct: 500 IYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ G + + DG+ A+ LI E + G AS +M I+
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE-LIKE-MRSCGFVGDASTISMVIN 613
Query: 306 LYNEGRI 312
+ ++GR+
Sbjct: 614 MLHDGRL 620
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 16/289 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I + ++ E +++ D+M S + +++ I + +L+EA +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +C ++NTL+K K ++E LF R + + N L+ L Q
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D+A +F++M G PD +Y IL+ GLC +L +A +F + +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL----VVFEYLQKSKMEP 498
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y ++ +C GK++D + + KG+K + C G E A +L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EEADAL 557
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK-----VLDEMRTKGF 327
E G +P+ +Y+ + R+ +GDK ++ EMR+ GF
Sbjct: 558 FREMKEDGTLPNSGTYNTLI-----RARLRDGDKAASAELIKEMRSCGF 601
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 194/404 (48%), Gaps = 21/404 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HIL 137
+ I Y +AG++N A+S+ +S V ++NT+L+ + KL+ A +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R CY + + +L++ C+ A+ + EM +GC PD +Y++L+ G+C
Sbjct: 231 LQRDCY-----PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ RL+EA L M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 286 KEGRLDEAIKFLNDM----PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + C G + G I E + + G P+ SY+ + E ++
Sbjct: 342 PSVVTFNILINFLCRKG--LLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ L+ M ++G +P +V Y L AL KDG V++A+E++ + KG P + YN ++ G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDG 458
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L AG + A+ L +M + + TY LV GL R+G+ EA + E P
Sbjct: 459 LAKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
T+N ++ GLC + A+ +L MI++ P + ++ L+
Sbjct: 518 NAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 46/400 (11%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T IR + R G+ +A + + L V ++N ++ K ++ A + R
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR--- 197
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + N ++ LC + A+ V M + CYPD +Y IL++ C D +
Sbjct: 198 -MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A LL M +G D+V Y L+ +C +G++ +A++ L + G +
Sbjct: 257 QAMKLLDEM----RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ------ 306
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
P++ +++ + + + GR ++ +K+L +M
Sbjct: 307 ------------------------------PNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KGF PS+V + + L + G++ A++++E+ M K P YN LL G C
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEK-MPKHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A+ YL++M + GC + TY ++ LC+DG+ +A +L ++ + P + TYN
Sbjct: 396 DRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+I GL GK +A+ L+EM ++ PD +SSLV +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 173/384 (45%), Gaps = 47/384 (12%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L+++V+ +LE Y V I L+ C+ ++ A + + ++
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG-FCRMGKTRKAAKILEVLE 164
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G PD +Y++++ G C +N A +L M D+V Y T+L +LCD
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-------SVSPDVVTYNTILRSLCDS 217
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
GK++ AM++L+++L+ R P + +
Sbjct: 218 GKLKQAMEVLDRMLQ------------------------------------RDCYPDVIT 241
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + + + + K+LDEMR +G P +V Y + + K+G +DEA++ + + M
Sbjct: 242 YTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND-M 300
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V +NI+L+ +C G A L M ++ G + T+ IL++ LCR G
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGL 359
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
A +LE+M P +YN L+ G C K A+ +LE M+S+ PDI +++
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 479 LVASVCCNTADLNVCRKTLEQLSS 502
++ ++ C + + L QLSS
Sbjct: 420 MLTAL-CKDGKVEDAVEILNQLSS 442
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 171/386 (44%), Gaps = 49/386 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + + + +++D+M+ C + + + G+L+EA+ ++
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 107 SQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
C + N +L+ M + ++A +L LR + V + N+L++ LC+
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV----VTFNILINFLCR 356
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ + ++M GC P+ SY+ L+ G C +++++ A L M R G
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR----GCYP 412
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DIV Y T+L ALC GK++DA++ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVE------------------------------------I 436
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+N+ +G P L +Y+ + L G+ + K+LDEMR K P + Y + + L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G VDEA++ E G P +N ++ GLC + A+ +L M + GC
Sbjct: 497 EGKVDEAIKFFHEFERMGVR-PNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR-GCKPTE 554
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEM 429
+Y IL++GL +G EA +L E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 230/522 (44%), Gaps = 47/522 (9%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+++Q P AL++ A + ++ VY +I L + MK ++ +M+ + +
Sbjct: 48 LREQPDPDAALRMLNAALAR-DDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQ 106
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNCVNWTQSFNTLLKEMVKESKLEAAH 135
K V + + +Y ++AV L N Q F T +N LL +V+ SK++
Sbjct: 107 VKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK--- 163
Query: 136 ILFLRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
L S Y +K + + N LM LC+ + A+ + +EM +G PD ++
Sbjct: 164 --LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTT 221
Query: 192 LMKGLCNDRRLNEA------------------THLLYSMFWRISQ-------------KG 220
LM+G + + A ++L + + ++ + G
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D + Y T + LC + A+++++ ++++G + + C C +G+ +E A
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ-LEEA 340
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K ++N+ + RG +P + +++ + L R+ E + ++ KG P + + + A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G AL + EE M P YN L+ LC G A+ LK M + GC
Sbjct: 401 LCKVGDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCP 458
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++DGLC+ R EA V ++M ++ T+N LI GLC K +A
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ +MIS+ P+ ++S++ C D+ LE +++
Sbjct: 519 INQMISEGLQPNNITYNSILTHY-CKQGDIKKAADILETMTA 559
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 16/442 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++ +L E +++ ++ V +M + F T ++ RA Q+ AV + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLC 162
S +F TL++ V+E +EAA + R C +V ++N+L++ C
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV-----TVNVLINGYC 262
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R + AL Q+ G PD+ +Y+ + GLC + + A ++ M Q+G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV----QEGHD 318
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ Y ++ LC G++++A IL +++ +G + + + C G +E A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCT-GNRLEEALD 377
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + ++G P + +++ + L G ++ +EM+ G P V Y + L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G + +AL+++++ G T+ YN ++ GLC A +M Q G N
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRN 495
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+DGLC+D + +A ++ +M+ P TYN ++ C G +A LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M + D+ + +L+ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 190/434 (43%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L +++ + +V+D M + + + + + GQL EA + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ +FNTL+ + ++LE A + R V + + N+L++ LC+
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LAL +F+EM GC PD +Y+ L+ LC+ +L +A LL M G +
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM----ESTGCPRSTI 462
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ +G+ R+ I DG
Sbjct: 463 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-----RNAITFNTLIDG------------ 505
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + +I + +++++M ++G P+ + Y + L K G
Sbjct: 506 -------------------LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A +++E M F V Y L+ GLC AG + VA+ L+ M + G + Y
Sbjct: 547 IKKAADILET-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK-GMRPTPKAY 604
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA ++ EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 466 SQAKLPDISVWSSL 479
+ +P+ S + L
Sbjct: 665 DKGFIPEFSSFRML 678
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 200/473 (42%), Gaps = 43/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++++ ++++M ++ F T ++ + G + A+ + +
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + N L+ K ++E A + +++ + + N ++ LCQ
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDA-LGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V M +G PD +Y+I++ LC + +L EA +L M R G DI
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR----GCLPDIT 357
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ ALC ++++A+ + ++ KG+ +P I + D A L E
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGV-SPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 287 ALIRGGIPSLASYSAM------------AIDL---------------YN--------EGR 311
G P +Y+ + A+DL YN + R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E ++V D+M +G + + + + L KD +D+A E+I + M+ P YN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ-MISEGLQPNNITYN 535
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+L C G+ A L+ M+ G + TYG L++GLC+ GR A +VL M I
Sbjct: 536 SILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P + YN +++ L +A+ EM + PD + + +C
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F +R AG+ A+ L + + + N V ++NT++ +++AA +
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMRE 539
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ + ++ C+ R D A+ VF EM +G P+ Y+ L+ G C+
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+ T LLY R+ ++G + Y L+ AL G+ +A +++E++ KGL AP
Sbjct: 600 GKLD--TALLYRD--RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL-AP 654
Query: 260 KSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I + C +G +++ A + RG ++ +Y+A+ L +G++ E DK+
Sbjct: 655 DVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 713
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DE +G P LV+Y A + + G +D A E++ E M K P YN L++GLC
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLC 772
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + +M+++ G + TY L+ G G +A R+ EM+ + + P +
Sbjct: 773 LLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 831
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN LI+GLC G+ +A ++EM+ PD S + SL+
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 193/422 (45%), Gaps = 30/422 (7%)
Query: 84 ATAIRTYARAGQLN------------------EAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
AT++R Y+R L+ A +LF ++ + T +FN +L+ +
Sbjct: 434 ATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHL 493
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYP 184
K A + LR + + N ++ C R AL + +EM + G P
Sbjct: 494 CSAGK-PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 548
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
++ +Y ++ G C R++EA + M + K + V+Y L+ CDQGK+ A
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTA 605
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++++ +G+ + + + DG E A L+ E +G P + +Y+ +
Sbjct: 606 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLAPDVFTYNILIN 664
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG + + ++ + M +G ++V Y A + AL K G V E ++ +E + +G
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG-IR 723
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +YN L+ +GN A + +M K+ + TY L+ GLC GR EA +
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARK 782
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++EM R P + TYN LI G G +A+ EM+++ P + +++L+ +C
Sbjct: 783 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 842
Query: 485 CN 486
N
Sbjct: 843 KN 844
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 5/201 (2%)
Query: 1 MSVRWPRLLTPTYLSQI--IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
MS R R TY + I + K+ K+F EA + R + +Y ++I S S
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR--GIRPDLVLYNALINSHSTS 739
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
I E++ +M+ D + T +R G+++EA L +++ ++
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
NTL+ + ++ A + + + N L+ LC+ + D A ++ +EM
Sbjct: 800 NTLISGYSMKGDVKDA-LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858
Query: 179 FQGCYPDRESYHILMKGLCND 199
G PD +Y L++GL +
Sbjct: 859 ENGITPDDSTYISLIEGLTTE 879
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 190/397 (47%), Gaps = 8/397 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+T R +LN+A+ LF ++ + FN LL +VK K + I + +
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGI 116
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ + + N++++ C C + LAL + +M G PDR + L+ G C R+++A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M + G DIV Y ++ +LC ++ DA ++I RKG++ +
Sbjct: 177 LVDKMV----EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
CN + A+ L+++ + + P++ +YSA+ G+++E ++ +EM
Sbjct: 233 NGLCNSSRWSDAAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + L +DEA ++ + + KG V YN L+ G C A +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGM 350
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++MS Q G V+N TY L+ G + G +A +M P + TYN+L+ G
Sbjct: 351 KLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G+ +A++ E+M + DI +++++ +C
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K I + N ++D LC+ +R + A F+E++ +G P+ +Y L+ GLCN R ++A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI- 266
LL M +K +++ Y LL A GK+ +A ++ E+++R + +
Sbjct: 247 LLSDMI----KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 267 -DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
LC + I+ A + + + +G + + SY+ + R+ +G K+ EM +
Sbjct: 303 NGLCL---HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + V Y + F+ G VD+A E + G P + YNILL GLCD G
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEK 418
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ + M K+ + + TY ++ G+C+ G+ EA + + ++ P + TY ++
Sbjct: 419 ALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 446 RGLCSIGKQYEA 457
GLC+ G +E
Sbjct: 478 SGLCTKGLLHEV 489
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 16/291 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K L A ++F+E + + Y+S+I L +RI E
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C + T I + +A ++ + + LF+ +SQ V+ T ++NTL++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ ++ A F + + + + I + N+L+ LC + AL +F++M + D
Sbjct: 376 FQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +++G+C ++ EA +S+F +S KG DIV Y T++ LC +G + +
Sbjct: 435 IVTYTTVIRGMCKTGKVEEA----WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ K+ ++GL C +DG DI + LI + L G PSL
Sbjct: 491 ALYTKMKQEGLMKND--------CTLSDG-DITLSAELIKKMLSCGYAPSL 532
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 190/399 (47%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + R QL A+++ + + + ++LL ++ A + + + E
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA-VALVDQMFVME 164
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N L+ L ++ A+ + M +GC PD +Y ++ GLC ++ A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 207 HLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M +KG E D+VIY T++ ALC+ + DA+ + ++ KG++ +
Sbjct: 225 SLLKKM-----EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 279
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C CN G A L+++ + R P++ ++SA+ EG++VE +K+ DEM +
Sbjct: 280 LIRCLCNYGR-WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P + Y + + +DEA + E + K F P V YN L+KG C A
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEE 397
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ ++MS Q G V N TY L+ GL + G A ++ ++M+ P + TY++L+
Sbjct: 398 GMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A++ E + PDI ++ ++ +C
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 495
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 204/435 (46%), Gaps = 14/435 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI+E ++DQM + F T I + +EAV+L +
Sbjct: 138 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 197
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + ++D LC + +
Sbjct: 198 RGCQPDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 256
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EMD +G P+ +Y+ L++ LCN R ++A+ LL M ++ ++V +
Sbjct: 257 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 312
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 313 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 371
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + R+ EG ++ EM +G + V Y + LF+ G D
Sbjct: 372 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 431
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A ++ ++ MV P + Y+ILL GLC G + V YL+K + + T
Sbjct: 432 MAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PDIYT 486
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V Y +I G C G + EA EM
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Query: 466 SQAKLPDISVWSSLV 480
LP+ +++L+
Sbjct: 547 EDGTLPNSGTYNTLI 561
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV LF + Q + FN LL + K +K + L R + + S
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER-MQNLRISYDLYSY 102
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS L AL V +M G PD + L+ G C+ +R++EA L+ M
Sbjct: 103 NILIN--CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F Q + V + TL+ L K +A+
Sbjct: 161 FVMEYQPNT----VTFNTLIHGLFLHNKASEAV--------------------------- 189
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+LI+ + RG P L +Y + L G I +L +M +V
Sbjct: 190 ---------ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 240
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + AL V++AL + E KG P V YN L++ LC+ G + A L
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSD 299
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 300 MIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +++L+ C
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 18/361 (4%)
Query: 129 SKLEAAHILF-LRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
++L A LF LR Y ++ + ++ S N+L+D+ + D A+ +F EM
Sbjct: 8 AQLRKASPLFSLRGVYFSAASYDYREKL-SRNVLLDL-----KLDDAVDLFGEMVQSRPL 61
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P ++ L+ + + + L+ S+ R+ D+ Y L+ C + ++
Sbjct: 62 PSIVEFNKLLSAIAKMNKFD----LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL 117
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ +L K+++ G + + C+ G+ I A +L+++ + P+ +++ +
Sbjct: 118 ALAVLGKMMKLGYEPDIVTLSSLLNGYCH-GKRISEAVALVDQMFVMEYQPNTVTFNTLI 176
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ + E ++D M +G P L Y + L K G +D AL ++++ M KG
Sbjct: 177 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKI 235
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
V +Y ++ LC+ N A+ +M + G N TY L+ LC GR+ +AS
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDAS 294
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R+L +M+ R P V T++ LI GK EA +EMI ++ PDI +SSL+
Sbjct: 295 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 354
Query: 484 C 484
C
Sbjct: 355 C 355
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 148/307 (48%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K+ + A K++ E ++ + + Y+S+I +R+ E K
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ + M C + T I+ + +A ++ E + LF+ +SQ V T ++NTL++ +
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + A +F + V I + ++L+D LC+ + + AL VF+ + PD
Sbjct: 425 FQAGDCDMAQKIF-KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 483
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I+++G+C ++ + + +F +S KG +++IY T++ C +G ++A
Sbjct: 484 IYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 539
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ G + + DG+ A+ LI E + G AS +M I+
Sbjct: 540 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE-LIKE-MRSCGFVGDASTISMVIN 597
Query: 306 LYNEGRI 312
+ ++GR+
Sbjct: 598 MLHDGRL 604
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 16/289 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I + ++ E +++ D+M S + +++ I + +L+EA +F
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +C ++NTL+K K ++E LF R + + N L+ L Q
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLVGNTVTYNTLIQGLFQ 426
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D+A +F++M G PD +Y IL+ GLC +L +A +F + +
Sbjct: 427 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL----VVFEYLQKSKMEP 482
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y ++ +C GK++D + + KG+K + C G E A +L
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EEADAL 541
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK-----VLDEMRTKGF 327
E G +P+ +Y+ + R+ +GDK ++ EMR+ GF
Sbjct: 542 FREMKEDGTLPNSGTYNTLI-----RARLRDGDKAASAELIKEMRSCGF 585
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 188/391 (48%), Gaps = 21/391 (5%)
Query: 98 EAVSLFKNLSQ---FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
EA+ L +++ +NC S+NT++ KE +++ A+ LF G + + +
Sbjct: 180 EALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLF-HEMMGQGLPPDVVTY 238
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+D LC+ + D A+ + Q M +G PD +Y+I+++G C+ +L EA LL M
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM-- 296
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
S G D+V Y L+ C G+ +A + + ++RKG K P S + I L G
Sbjct: 297 --SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQK-PNSTIYHILL----HG 349
Query: 275 EDIEGAKSLINEAL---IRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+GA + + L IR GIP +++ + G + + EMR G P
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMY 389
+V Y + L K G V++A+ + MV P + + L+ GLC G V +
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQ-MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELA 468
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ +++ G + ++D LC++GR +EA + ++ P V +YN LI G C
Sbjct: 469 FEMINR--GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+GK E++ L+ M+S PD ++SL+
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 218/485 (44%), Gaps = 26/485 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T L + K ++ A+ I + +K P+ R Y MI ++ E
Sbjct: 233 PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTR----TYNIMIRGYCSLGQLEE 288
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++ +M G + ++ I+ Y + G+ EA S+F ++ V Q N+ +
Sbjct: 289 AVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM-----VRKGQKPNSTIY 343
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDF 179
++ ++ +R ++ I ++ N+L+ + D A+ F EM
Sbjct: 344 HILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQ 403
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD SY ++ LC R+ +A + F ++ +G +I+ + +L+ LC G
Sbjct: 404 NGLRPDVVSYSTVIHILCKTGRVEDAVY----HFNQMVSEGLSPNIISFTSLIHGLCSIG 459
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + ++ +++ +G+ + I C +G +E A+ + + G P + SY
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE-AQDFFDMVIHIGVKPDVVSY 518
Query: 300 SAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ + ID Y G++ E K LD M + G P Y + L FK+G V++AL + E
Sbjct: 519 NTL-IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDG 417
K + NI+L GL AG A +Y+K + + G ETY ++ GLC +
Sbjct: 578 RKDVKFCAI-TSNIMLHGLFQAGRIVAARELYMKMVDR--GTQLRIETYNTVLGGLCENS 634
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
EA R+ E++ + + V T++++I L +G+ EA M+ + +PD+ +S
Sbjct: 635 CVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYS 694
Query: 478 SLVAS 482
++ S
Sbjct: 695 LMIKS 699
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 200/472 (42%), Gaps = 46/472 (9%)
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA---VSLFKNLSQF 109
G L + + E++ Q + S +SV R + + + A VSLF + +
Sbjct: 26 GSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRS 85
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSD 168
L++ +L+ A F GW V++ +LN L+ LC R+D
Sbjct: 86 GVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQN--VTLNQLIKGLCDGNRTD 143
Query: 169 LALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------------ 209
A+ VF+ M G PD SY+ L+KGLC +++ EA LL
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203
Query: 210 ----------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
Y +F + +G D+V Y +L+ LC + A+ IL+ +
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263
Query: 254 KGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG+ P +R + I + C+ G+ +E A L+ + G P + +YS + GR
Sbjct: 264 KGV-MPDTRTYNIMIRGYCSLGQ-LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E V D M KG P+ +Y L G + + ++++ M++ R +NI
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL-MIRDGIPFEHRAFNI 380
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ G A+ +M +Q G + +Y ++ LC+ GR +A +M+
Sbjct: 381 LICAYAKHGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + ++ LI GLCSIG+ + EMI++ PD ++++ ++C
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 153/348 (43%), Gaps = 21/348 (6%)
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
R +LNL ++L Q R + ++H F + D S + L
Sbjct: 29 GREDALNLFDELLPQARPA--SVHAFNSVLTVVARADSSS------------SPRHSAAL 74
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
S+F + + G I L+ C G++ A L+ G + +++
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 269 CPCNDGEDIEGAKSLINEALIR-GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C DG + A ++ + G P + SY+A+ L E + E ++L M G
Sbjct: 135 GLC-DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGG 193
Query: 328 W---PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P++V Y + FK+G VD+A + E M +G P V YN L+ GLC A
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQG-LPPDVVTYNSLIDGLCKAQAMD 252
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
AV L+ M + G + + TY I++ G C G+ EA R+L++M P V TY++L
Sbjct: 253 KAVAILQHMFDK-GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
I+ C IG+ EA + M+ + + P+ +++ L+ A ++V
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 359
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 127/331 (38%), Gaps = 35/331 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ F E ++ R + Y+++I IL ++ R+ + +QM + F +
Sbjct: 394 AMTAFTEMRQN--GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I G+ + L + NT++ + KE ++ A F +
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH-IG 510
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
VK + S N L+D C + D ++ M G PD +Y+ L+ G + R+ +A
Sbjct: 511 VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570
Query: 207 HLLYSMF-------------------------------WRISQKGSGEDIVIYRTLLFAL 235
L MF ++ +G+ I Y T+L L
Sbjct: 571 ALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C+ + +A+++ E + K + R I + I+ AKSL + ++RG +P
Sbjct: 631 CENSCVDEALRMFEDLRSKEFEL-DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPD 689
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ +YS M EG + E D + M G
Sbjct: 690 VITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 16/405 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T I+ GQ+++A+ N+ + TL+ + K + AA + LR
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA-LDLLRRV 188
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V+ + + ++D +C+ + + A ++ EM +G P+ +Y L+ G +L
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+A L F ++ + D+ + L+ C GK+++ + ++++G+K
Sbjct: 249 KDAIDL----FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP---- 300
Query: 263 RHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + C DG +++ AKS++ RG P + SY+ + ++ E +
Sbjct: 301 -NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
EM K P +V Y + + L K G + AL++++E +G P + Y+ +L LC
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV-PPDIITYSSILDALC 418
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A+ L K+ Q G N TY IL+DGLC+ GR +A + E++L++ Y V
Sbjct: 419 KNHQVDKAIALLTKLKDQ-GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TY V+I G C+ G EA+ L +M + +PD + ++ S+
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 174/370 (47%), Gaps = 8/370 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T +F TL+K + + ++ A +LF + + L+ LC+ + AL +
Sbjct: 127 TITFTTLIKGLCLKGQIHQA-LLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL 185
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ +D P+ Y ++ G+C D+ +N+A + ++ + KG ++V Y L+
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA----FDLYSEMVSKGISPNVVTYSALISG 241
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
G+++DA+ + K++ + +K + + C DG+ EG K++ + +G P
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG-KTVFAMMMKQGIKP 300
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y ++ + + +L M +G P + Y + K VDEA+ +
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E M +P V YN L+ GLC G + A+ + +M + G + TY ++D LC
Sbjct: 361 KE-MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR-GVPPDIITYSSILDALC 418
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++ + +A +L ++ + P + TY +LI GLC G+ +A E+++ + ++
Sbjct: 419 KNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 478
Query: 475 VWSSLVASVC 484
++ ++ C
Sbjct: 479 TYTVMIHGFC 488
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 170/389 (43%), Gaps = 44/389 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y+++I + + + + ++ +M ++ I + GQL +A+ LF
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ N +FN L+ K+ K++ +F +K + + LMD C
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNVVTYCSLMDGYCL 314
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A + M +G PD +SY+IL+ G C ++++EA +L F + K
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL----FKEMHHKHIIP 370
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y +L+ LC GKI A++ L
Sbjct: 371 DVVTYNSLIDGLCKLGKISYALK------------------------------------L 394
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++E RG P + +YS++ L ++ + +L +++ +G P++ Y + L K
Sbjct: 395 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 454
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +++A + E+ +VKG + TV Y +++ G C+ G A+ L KM K C+ +
Sbjct: 455 GGRLEDAHNIFEDLLVKGYNI-TVNTYTVMIHGFCNKGLFDEALALLSKM-KDNSCIPDA 512
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR 432
TY I++ L +A + L EM+ R
Sbjct: 513 VTYEIIIRSLFDKDENDKAEK-LREMITR 540
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 208/432 (48%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ S RI++ ++DQM + F T I + +EAV+L + Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + N ++D LC+ + D
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EMD +G PD +Y L+ LCN R ++A+ LL M ++ ++V +
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 331
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 390
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +YS + R+ EG ++ EM +G + V Y + F+ D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++ ++MV P + YNILL GLC G A A++ + + + + TY I
Sbjct: 451 NA-QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNI 508
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V YN +I G C G + EA L++M
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 569 PLPNSGTYNTLI 580
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 192/439 (43%), Gaps = 45/439 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ I + R QL+ A+++ + + + ++LL ++ A + +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA-VALVDQ 178
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + L+ L ++ A+ + +M +GC PD +Y ++ GLC
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 202 LNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ A LL M +KG E D+VIY T++ LC + DA+ + ++ KG++
Sbjct: 239 IDLALSLLKKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ C CN G A L+++ + R P++ ++SA+ EG++VE +K+ D
Sbjct: 294 FTYSSLISCLCNYGR-WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM + P + Y + + +DEA + E + K F P V Y+ L+KG C A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKA 411
Query: 381 -------------------GNSAV----------------AVMYLKKMSKQVGCVANGET 405
GN+ A M K+M VG N T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILT 470
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y IL+DGLC++G+ +A V E + + P + TYN++I G+C GK + +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P++ ++++++ C
Sbjct: 531 LKGVSPNVIAYNTMISGFC 549
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 176/393 (44%), Gaps = 16/393 (4%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTL---LKEMVKESKLEAAHILFLRSCYGWEVKSR----I 151
V F NL C W +SF + +E+++ + + +G VKSR I
Sbjct: 26 TVPSFFNLCGSGC--WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSI 83
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
N L+ + + + +L + + ++M G D +Y I + C +L+ A +L
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G DIV +LL C +I DA+ ++++++ G K P + +
Sbjct: 144 MM----KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-PDTFTFTTLIHGL 198
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
A +L+++ + RG P L +Y + L G I +L +M +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V+Y + L K +D+AL + E KG P V Y+ L+ LC+ G + A L
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 318 DMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +S+L+ C
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/559 (22%), Positives = 237/559 (42%), Gaps = 84/559 (15%)
Query: 6 PRLLTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI--- 61
P ++ P +++ + SP AL++F+ A E P +R + V+ +++ IL+++N +
Sbjct: 76 PVIVDPDLFVRVLSSFRTSPRMALRLFRWA-ESQPGFRRSEFVFCAILEILAQNNLMRSA 134
Query: 62 ---------TEMKEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M ++D + G S E + I Y++ + + +S+F + +
Sbjct: 135 YWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSR 194
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++ N +L+ ++++ L + + R+ + +K I + N L+D C+ +
Sbjct: 195 LSPDVKNCNRILR-ILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-------------------THLLYS 211
L + EM +GC P+ +Y++L+ GL +A L+Y
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 212 MFWR------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
F + + KG+ + Y + ++ LC G++ DAMQ L +L L
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A L +E P++ +Y+ + L +G + ++
Sbjct: 374 VVSYNTLIYGYCRLG-NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 320 DEMRTKGFWPSLVMY-----------EAKLAALFKDGMVDEALEV--------------- 353
EM +G P +V Y +A F D M+ E LE+
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 354 --------IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++EEM+ F P + +YN+++ GLC GN A L+KM G + + T
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD-GVIPDYVT 551
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ +GR + + EML + P V TY VLI G G+ A ++ EM
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 466 SQAKLPDISVWSSLVASVC 484
+ LP++ ++SL+ +C
Sbjct: 612 EKGILPNVITYNSLINGLC 630
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 194/446 (43%), Gaps = 26/446 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I LS+ + K +I +M + + I Y G L EA+SL
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N+ + + K ++ A + S + + NLL DV+
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDA----------MQQLSDMLANNLLPDVVSY 377
Query: 164 -------CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
CR +L A +F E+ +P +Y+ L+ GLC L A L M
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI- 436
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+G DIV Y L+ C G + A + +++L +GL+ S + +
Sbjct: 437 ---NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL-DSYAYATRIVGELKL 492
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
D A SL E L +G P L Y+ + L G + E ++L +M + G P V Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + A ++G + + E+ E + KG P+V Y +L+ G G A +Y +M
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ G + N TY L++GLC+ R +A EM+ + +P +Y +LI C++G
Sbjct: 612 EK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ ++M+ + PD S+L+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 197/434 (45%), Gaps = 24/434 (5%)
Query: 37 KYPNYRHNGPVYASM-IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ 95
K Y +N +Y G+L+E+ + E E++ +KG S + + + I + G+
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQE--EMV--LKGASPTV--ATYNSFIYGLCKLGR 354
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQS 153
+++A+ ++ N + S+NTL+ + L A +LF LRS Y + I +
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT---IVT 411
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+D LC+ ++A + EM +G PD +Y IL+ G C L+ A M
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+G D Y T + G A + E++L KG + + C
Sbjct: 472 ----HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++E A L+ + + G IP +Y+++ GR+ +G ++ EM +KG PS+V
Sbjct: 528 G-NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + G ++ A E KG +P V YN L+ GLC A + +M
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKG-ILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G N +Y IL++ C G + EA + ++ML R P T++ L++ L GK
Sbjct: 646 VEK-GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL---GK 701
Query: 454 --QYEAVMWLEEMI 465
+ +AV LE ++
Sbjct: 702 DCKLQAVRQLESLL 715
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 190/397 (47%), Gaps = 8/397 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+T R +LN+A+ LF ++ + FN LL +VK K + I + +
Sbjct: 161 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGI 219
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ + + N++++ C C + LAL + +M G PDR + L+ G C R+++A
Sbjct: 220 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 279
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M + G DIV Y ++ +LC ++ DA ++I RKG++ +
Sbjct: 280 LVDKMV----EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
CN + A+ L+++ + + P++ +YSA+ G+++E ++ +EM
Sbjct: 336 NGLCNSSRWSDAAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 394
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + L +DEA ++ + + KG V YN L+ G C A +
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGM 453
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++MS Q G V+N TY L+ G + G +A +M P + TYN+L+ G
Sbjct: 454 KLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G+ +A++ E+M + DI +++++ +C
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 213/443 (48%), Gaps = 10/443 (2%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y+ +I +++ V+ +M E ++ + Y + +++EAV+L
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ T +FNTL+ + +K A L R + + + ++++ LC
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLC 846
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +DLA ++ +M+ P Y+ ++ GLC + +++A +L F + KG
Sbjct: 847 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL----FKEMETKGIR 902
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V Y +L+ LC+ G+ DA ++L ++ + + + +G+ +E A+
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE-AEK 961
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E + R PS+ +YS++ R+ E ++ + M +K +P +V Y +
Sbjct: 962 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K V+E +EV E +G TV YNIL++GL AG+ +A K+M G N
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPN 1079
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 1080 IMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+ + PD+ ++++++ C
Sbjct: 1139 CNLSLKGVKPDVVAYNTMISGFC 1161
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 201/437 (45%), Gaps = 8/437 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL A+++ +
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + ++LL ++ A + + + + + N L+ L ++
Sbjct: 758 KLGYEPNIVTLSSLLNGYCHSKRISEA-VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + M +GC PD +Y +++ GLC T L +++ ++ Q ++I
Sbjct: 817 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCK----RGDTDLAFNLLNKMEQGKLEPGVLI 872
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC + DA+ + +++ KG++ + C CN G A L+++
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDM 931
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P + ++SA+ EG++VE +K+ DEM + PS+V Y + + +
Sbjct: 932 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA ++ E + K F P V YN L+KG C + ++MS Q G V N TY
Sbjct: 992 DEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYN 1049
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+ GL + G A + +EM+ P + TYN L+ GLC GK +A++ E +
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 468 AKLPDISVWSSLVASVC 484
P I ++ ++ +C
Sbjct: 1110 KMEPTIYTYNIMIEGMC 1126
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 205/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N +S++ S RI+E ++DQM + F T I + +EA+
Sbjct: 761 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 820
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + C ++ ++ + K + A L + G +++ + N ++D
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDG 879
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + D AL++F+EM+ +G P+ +Y L+ LCN R ++A+ LL M ++
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI----ERK 935
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ + L+ A +GK+ +A ++ ++++++ + + C + ++ A
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH-DRLDEA 994
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K + + + P + +Y+ + R+ EG +V EM +G + V Y +
Sbjct: 995 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQV 397
LF+ G D A E+ +E MV P + YN LL GLC G + V YL++ SK
Sbjct: 1055 LFQAGDCDMAQEIFKE-MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 1112
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY I+++G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 1113 PTIY---TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+EM LP+ +++L+
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLI 1192
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 229/505 (45%), Gaps = 45/505 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K L A ++F+E + + Y+S+I L +RI E
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SIDPDIVTYSSLINGLCLHDRIDEAN 418
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C + T I + +A ++ + + LF+ +SQ V+ T ++NTL++
Sbjct: 419 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 478
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ ++ A F + + + + I + N+L+ LC + AL +F++M + D
Sbjct: 479 FQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +++G+C ++ EA +S+F +S KG DIV Y T++ LC +G + +
Sbjct: 538 IVTYTTVIRGMCKTGKVEEA----WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL--------- 296
+ K+ ++GL C +DG DI + LI + L G PSL
Sbjct: 594 ALYTKMKQEGLMKND--------CTLSDG-DITLSAELIKKMLSCGYAPSLLKDIKSGVC 644
Query: 297 -------------ASYS---AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
SY ++ + +E ++ + + EM +PS++ + L+A
Sbjct: 645 KKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSA 704
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVR-VYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ K D + + E+ G +P Y+IL+ C +A+ L KM K +G
Sbjct: 705 IAKMNKFDVVISLGEQMQNLG--IPHNHYTYSILINCFCRRSQLPLALAVLGKMMK-LGY 761
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N T L++G C R EA ++++M + Y P T+N LI GL K EA+
Sbjct: 762 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 821
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
++ M+++ PD+ + +V +C
Sbjct: 822 LIDRMVAKGCQPDLVTYGVVVNGLC 846
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K I + N ++D LC+ +R + A F+E++ +G P+ +Y L+ GLCN R ++A
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI- 266
LL M +K +++ Y LL A GK+ +A ++ E+++R + +
Sbjct: 350 LLSDMI----KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Query: 267 -DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
LC + I+ A + + + +G + + SY+ + R+ +G K+ EM +
Sbjct: 406 NGLCL---HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + V Y + F+ G VD+A E + G P + YNILL GLCD G
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEK 521
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ + M K+ + + TY ++ G+C+ G+ EA + + ++ P + TY ++
Sbjct: 522 ALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580
Query: 446 RGLCSIGKQYEA 457
GLC+ G +E
Sbjct: 581 SGLCTKGLLHEV 592
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRS 141
F+ + A+ + + +SL + + + +++ L+ + S+L A +L
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G P+ +++ L+ GL +
Sbjct: 758 KLGYE--PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ KG D+V Y ++ LC +G A +L K+ + L+
Sbjct: 816 ASEAMALID----RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 871
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I LC +D A +L E +G P++ +YS++ L N GR + ++L
Sbjct: 872 IYNTIIDGLCKYKHMDD---ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 928
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC- 378
+M + P + + A + A K+G + EA E + +EMVK + P++ Y+ L+ G C
Sbjct: 929 SDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCM 987
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D + A M+ +SK C + TY L+ G C+ R E V EM R
Sbjct: 988 HDRLDEA-KQMFEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 1044
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN+LI+GL G A +EM+S P+I +++L+ +C N
Sbjct: 1045 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 19/406 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+A ++ ++G +A+SL + S ++ + L + + E KL+ A LF
Sbjct: 631 YAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREK---LSRNGLSELKLDDAVALF---- 683
Query: 143 YGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
G VKSR I + L+ + + + D+ + + ++M G + +Y IL+ C
Sbjct: 684 -GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+L A +L M + G +IV +LL C +I +A+ +++++ G +
Sbjct: 743 RSQLPLALAVLGKMM----KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ- 797
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + + A +LI+ + +G P L +Y + L G +
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L++M P +++Y + L K +D+AL + +E KG P V Y+ L+ LC
Sbjct: 858 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLC 916
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G + A L M ++ + T+ L+D ++G+ +EA ++ +EM+ RS P +
Sbjct: 917 NYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI G C + EA E M+S+ PD+ +++L+ C
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 209/433 (48%), Gaps = 17/433 (3%)
Query: 56 SESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT 115
S +R+ ++ ++ M G+ C + VF IRTY +A +L E F+ L +
Sbjct: 25 SGVSRVEVVEALVSSMCGN-CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSI 83
Query: 116 QSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
+ N+LL +VK +E A H +RS G E+ + +LN++++ LC+ + D
Sbjct: 84 NACNSLLGGLVKIDWVELAWEVHREVVRS--GIELN--VYTLNIMVNALCKDGKFDDVKS 139
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
EM+ G Y D +Y+ L+ C + L EA ++ SM + KG + Y ++
Sbjct: 140 FLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM----ADKGLKPSLFTYNAII 195
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC +G+ A IL ++L GL +P + + L ++ AK + E L +G
Sbjct: 196 NGLCKKGRYARAKGILIEMLNIGL-SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKV-LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
+P L S+S++ I +++ R ++ V +M+ G P V+Y + ++G + EAL
Sbjct: 255 VPDLVSFSSL-IAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 313
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ I +EM++ V V YN +L GLC A +M ++ G + + T+ L+
Sbjct: 314 K-IRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER-GALPDFYTFTTLIH 371
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G C+DG +A + M R+ P + YN LI G C +G+ +A + MIS+ P
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 431
Query: 472 DISVWSSLVASVC 484
+ + L+ + C
Sbjct: 432 NHITYGILINAYC 444
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 14/436 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++IG + E E+++ M + + I + G+ A + +
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQC 164
T ++NTLL E + A +F LR V + S + L+ V +
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ----GVVPDLVSFSSLIAVFSRN 271
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R D AL F++M G PD Y +LM G C + + EA + M ++G D
Sbjct: 272 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML----EQGCVLD 327
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
++ Y T+L LC + + DA ++ ++++ +G + C DG ++ A SL
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDG-NMTKALSLF 386
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
R P + +Y+ + G + + ++ D M ++ +P+ + Y + A
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V EA + + + KG PT+ N ++KG C +G+S+ A +L +M + G +
Sbjct: 447 GHVSEAFRLWDVMIEKG-IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK-GVAPDHI 504
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y L++G R+ +A + +M P + TYNV++ G C G+ EA + L +M
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 465 ISQAKLPDISVWSSLV 480
I + PD S +++L+
Sbjct: 565 IEKGINPDRSTYTALI 580
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 186/425 (43%), Gaps = 8/425 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + R K ++ +M + + T + R +EA +F +
Sbjct: 191 YNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEML 250
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ V SF++L+ + L+ A +++ R + + +LM C+
Sbjct: 251 RQGVVPDLVSFSSLIAVFSRNRHLDQA-LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + EM QGC D +Y+ ++ GLC ++ L +A L F + ++G+ D
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL----FDEMVERGALPDFYT 365
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ C G + A+ + + ++ +K + + C GE +E A L +
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE-MEKASELWDGM 424
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P+ +Y + + G + E ++ D M KG P+LV + + G
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A E + + KG P YN L+ G N A +++ KM K+ G + + TY
Sbjct: 485 SKADEFLGRMIAKGV-APDHISYNTLINGFVREDNMDKAFLWINKMEKE-GLLPDIITYN 542
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++++G CR GR EA VL +M+ + P TY LI G + EA + +EM+ +
Sbjct: 543 VVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Query: 468 AKLPD 472
PD
Sbjct: 603 GFAPD 607
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 188/436 (43%), Gaps = 12/436 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L + + ++K + +M+G+ + T I Y R G L EA + +++
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL- 169
++N ++ + K+ + A + + + + N L+ + CRR +
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILI-EMLNIGLSPDTTTYNTLL--VESCRRDNFS 240
Query: 170 -ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F EM QG PD S+ L+ +R L++A L+Y F + + G D VIY
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA--LVY--FRDMKKFGLVPDNVIY 296
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ C G + +A++I +++L +G + I C + + + A L +E +
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE-KMLTDADKLFDEMV 355
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
RG +P +++ + +G + + + M + P +V Y + K G ++
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A E + + M+ P Y IL+ C G+ + A M ++ G T
Sbjct: 416 KASE-LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK-GIKPTLVTCNT 473
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++ G CR G +A L M+ + P +YN LI G +A +W+ +M +
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 469 KLPDISVWSSLVASVC 484
LPDI ++ ++ C
Sbjct: 534 LLPDIITYNVVMNGFC 549
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 190/397 (47%), Gaps = 8/397 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+T R +LN+A+ LF ++ + FN LL +VK K + I + +
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGI 116
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ + + N++++ C C + LAL + +M G PDR + L+ G C R+++A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M + G DIV Y ++ +LC ++ DA ++I RKG++ +
Sbjct: 177 LVDKMV----EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
CN + A+ L+++ + + P++ +YSA+ G+++E ++ +EM
Sbjct: 233 NGLCNSSRWSDAAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + L +DEA ++ + + KG V YN L+ G C A +
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGM 350
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++MS Q G V+N TY L+ G + G +A +M P + TYN+L+ G
Sbjct: 351 KLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G+ +A++ E+M + DI +++++ +C
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K I + N ++D LC+ +R + A F+E++ +G P+ +Y L+ GLCN R ++A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI- 266
LL M +K +++ Y LL A GK+ +A ++ E+++R + +
Sbjct: 247 LLSDMI----KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
Query: 267 -DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
LC + I+ A + + + +G + + SY+ + R+ +G K+ EM +
Sbjct: 303 NGLCL---HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + V Y + F+ G VD+A E + G P + YNILL GLCD G
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEK 418
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ + M K+ + + TY ++ G+C+ G+ EA + + ++ P + TY ++
Sbjct: 419 ALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 446 RGLCSIGKQYEA 457
GLC+ G +E
Sbjct: 478 SGLCTKGLLHEV 489
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 16/291 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K L A ++F+E + + Y+S++ L +RI E
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SIDPDIVTYSSLVNGLCLHDRIDEAN 315
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C + T I + +A ++ + + LF+ +SQ V+ T ++NTL++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ ++ A F + + + + I + N+L+ LC + AL +F++M + D
Sbjct: 376 FQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +++G+C ++ EA +S+F +S KG DIV Y T++ LC +G + +
Sbjct: 435 IVTYTTVIRGMCKTGKVEEA----WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ K+ ++GL C +DG DI + LI + L G PSL
Sbjct: 491 ALYTKMKQEGLMKND--------CTLSDG-DITLSAELIKKMLSCGYAPSL 532
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 194/403 (48%), Gaps = 19/403 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HIL 137
+ I Y +AG++N A+S+ +S V ++NT+L+ + KL+ A +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R CY + + +L++ C+ A+ + EM +GC PD +Y++L+ G+C
Sbjct: 231 LQRDCY-----PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ RL+EA L M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 286 KEGRLDEAIKFLNDM----PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C G + A ++ + G P+ SY+ + E ++ +
Sbjct: 342 PSVVTFNILINFLCRKGL-LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L+ M ++G +P +V Y L AL KDG V++A+E++ + KG P + YN ++ GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDGL 459
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG + A+ L +M + + TY LV GL R+G+ EA + E P
Sbjct: 460 AKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
T+N ++ GLC + A+ +L MI++ P+ + ++ L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 190/402 (47%), Gaps = 13/402 (3%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T IR + R G+ +A + + L V ++N ++ K ++ A + R
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR--- 197
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + N ++ LC + A+ V M + CYPD +Y IL++ C D +
Sbjct: 198 -MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M +G D+V Y L+ +C +G++ +A++ L + G + P
Sbjct: 257 HAMKLLDEM----RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVIT 311
Query: 264 HRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
H I L C+ G ++ A+ L+ + L +G PS+ +++ + L +G + +L++M
Sbjct: 312 HNIILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P+ + Y L K+ +D A+E +E + +G + P + YN +L LC G
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY-PDIVTYNTMLTALCKDGK 429
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
AV L ++S + GC TY ++DGL + G+ +A ++L+EM + P TY+
Sbjct: 430 VEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GL GK EA+ + E P+ ++S++ +C
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 48/401 (11%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L++MV+ +LE Y V I L+ C+ ++ A + + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG-FCRLGKTRKAAKILEILE 164
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G PD +Y++++ G C +N A +L M D+V Y T+L +LCD
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-------SVSPDVVTYNTILRSLCDS 217
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLA 297
GK++ AM++L+++L++ P + I + C D + A L++E RG P +
Sbjct: 218 GKLKQAMEVLDRMLQRDC-YPDVITYTILIEATCRD-SGVGHAMKLLDEMRDRGCTPDVV 275
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRT--------------------------------- 324
+Y+ + + EGR+ E K L++M +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 325 --KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KGF PS+V + + L + G++ A++++E+ M + P YN LL G C
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK-MPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ YL++M + GC + TY ++ LC+DG+ +A +L ++ + P + TYN
Sbjct: 395 MDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+I GL GK +A+ L+EM ++ PD +SSLV +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 49/386 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + + +++D+M+ C + + + G+L+EA+ ++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 107 SQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
C + N +L+ M + ++A +L LR + V + N+L++ LC+
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV----VTFNILINFLCR 356
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ + ++M GC P+ SY+ L+ G C +++++ A L M R G
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR----GCYP 412
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DIV Y T+L ALC GK++DA++ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVE------------------------------------I 436
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+N+ +G P L +Y+ + L G+ + K+LDEMR K P + Y + + L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G VDEA++ E G P +N ++ GLC + + A+ +L M + GC N
Sbjct: 497 EGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNE 554
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEM 429
+Y IL++GL +G EA +L E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 12/284 (4%)
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L E L +M + G+ DI+ TL+ C GK + A +ILE IL P
Sbjct: 118 LEEGFKFLENMVYH----GNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPDV 172
Query: 262 RRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C GE I A S+++ + P + +Y+ + L + G++ + +VLD
Sbjct: 173 ITYNVMISGYCKAGE-INNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M + +P ++ Y + A +D V A+++++E +G P V YN+L+ G+C
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC-TPDVVTYNVLVNGICKE 287
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ +L M GC N T+ I++ +C GR+++A ++L +ML + + P V T
Sbjct: 288 GRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+N+LI LC G A+ LE+M P+ ++ L+ C
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
GE EG K L N + G +P + + + G+ + K+L+ + G P ++
Sbjct: 116 GELEEGFKFLEN-MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y ++ K G ++ AL V++ V P V YN +L+ LCD+G A+ L +M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
Q C + TY IL++ CRD A ++L+EM R P V TYNVL+ G+C G+
Sbjct: 231 -LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA+ +L +M S P++ + ++ S+C
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ R G E + LE M+ P + LIRG C +GK +A LE + +PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 473 ISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ ++ +++ C ++N L+++S
Sbjct: 172 VITYNVMISGY-CKAGEINNALSVLDRMS 199
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 202/421 (47%), Gaps = 18/421 (4%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFNTLLKEMVKESKLEAA 134
C +VF +++ + + +A+++ +L++ N + S+N +L +V+ K
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIV-DLAKLNGFMPGVLSYNAILDSIVRCRK---- 182
Query: 135 HILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
++F Y + S + S N+L+ C ++ L F+EM+ C P+ +Y+
Sbjct: 183 PVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYN 242
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ C +R++EA LL SM +G +++ Y ++ LC G+I++ +L +
Sbjct: 243 TVIGAYCKLKRIDEAFKLLRSM----GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAE 298
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ RKG + + C G + A L +E L G P + +Y+++ + G
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVG-NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG 357
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ + D+M +G P+ V Y + + + G +DEA I +EM++ F PT+ Y
Sbjct: 358 NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR-IWDEMIRSGFPPTIVTY 416
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N LL G C +G A+ L+ M + G + +Y ++ G CR A ++ EM+
Sbjct: 417 NALLNGHCVSGRMEEAIGLLRGMEGK-GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P TY+ LI+GLC + EA +EM++++ LPD ++SL+ C DL
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY-CKEGDL 534
Query: 491 N 491
N
Sbjct: 535 N 535
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + AG L + F+ + + C+ ++NT++ K +++ A L LRS
Sbjct: 210 IRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKL-LRSMGLEG 268
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + + N++++ LC+ R + V EMD +G PD +Y+ L+ G C ++A
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L+S R G D+V Y +L+ +C G + AM+ +++ +GL+ P +
Sbjct: 329 -VLHSEMLR---NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR-PNGVTYTS 383
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + ++ A + +E + G P++ +Y+A+ GR+ E +L M KG
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y +A + +D A + + EMV+ P Y+ L++GLC+ A
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQ-MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++M + + + TY L++G C++G EA + +EM+ + + P TYNVLI
Sbjct: 503 CDLFQEMLNK-SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLIN 561
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
GL + EA L ++ +P+ + +L+ S
Sbjct: 562 GLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 203/478 (42%), Gaps = 29/478 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++IG + RI E +++ M + E + I R G++ E +
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDV 160
+ + ++NTL+ K A +L LR+ +V + L++
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS----LINT 352
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+C+ + A+ F +M +G P+ +Y L+ G ++EA Y ++ + + G
Sbjct: 353 MCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA----YRIWDEMIRSG 408
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
IV Y LL C G++++A+ +L + KGL +P + + ++++ A
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL-SPDVVSYSTIIAGFCRYQELDRA 467
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ E + +G P +YS++ L + R+ E + EM K P Y + +
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+G ++EAL + +EM+K F+P YN+L+ GL + A L K+ +
Sbjct: 528 YCKEGDLNEALN-LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDES-I 585
Query: 401 ANGETYGILVD---------------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
NG TY L++ G C G EA +V E M+ R+ P YNV+I
Sbjct: 586 PNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVII 645
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSC 503
G C G ++A +EM+ +P +LV ++ D + + L SC
Sbjct: 646 HGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 184/448 (41%), Gaps = 21/448 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L RI E V+ +M + T + Y + G ++A+ L +
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ +L+ M K L A + F + ++ + L++ Q
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRA-MEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A ++ EM G P +Y+ L+ G C R+ EA LL M KG D+V
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM----EGKGLSPDVV 449
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C ++ A Q+ +++ KG+ +P + + + + + A L E
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGV-SPDAITYSSLIQGLCEQRRLNEACDLFQE 508
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + +P +Y+++ EG + E + DEM KGF P V Y + L K
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568
Query: 347 VDEALEVI-----EEEMVKGTFVPTV---------RVYNILLKGLCDAGNSAVAVMYLKK 392
EA ++ +E + G T+ + L+KG C G A +
Sbjct: 569 TREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFES 628
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M K+ N Y +++ G CRDG +A ++ +EM+ + P T L++ L S G
Sbjct: 629 MIKR-NQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + + +++ KL D + +LV
Sbjct: 688 MDEQLNLVIRDILRSCKLSDAELSKALV 715
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYN-EGRIVEGDKVLDEMRTKGFWPSLVMYE 335
IE A ++++ A + G +P + SY+A+ + ++ +KV EM G ++ Y
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYN 207
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ G ++ L EE M + +P V YN ++ C A L+ M
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEE-MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGL 266
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G N TY ++++GLCR GR E S VL EM + + P TYN L+ G C +G +
Sbjct: 267 E-GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+A++ EM+ PD+ ++SL+ ++ C +LN + +Q+
Sbjct: 326 QALVLHSEMLRNGLPPDVVTYTSLINTM-CKAGNLNRAMEFFDQM 369
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 28/407 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + K + A++ F + + R NG Y S+I S+ + E
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR--GLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ D+M + + + +G++ EA+ L + + S++T++
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458
Query: 126 VKESKLEAAHILFLRSCYGWE--VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ +L+ A F + E V + + L+ LC+ RR + A +FQEM +
Sbjct: 459 CRYQELDRA---FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y L+ G C + LNEA +L M +KG D V Y L+ L Q + ++
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMI----KKGFLPDTVTYNVLINGLNKQARTRE 571
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGED------IEG--AKSLINEA-------L 288
A ++L K+ P + + C+D E I+G K L+NEA +
Sbjct: 572 AKRLLLKLFYDE-SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMI 630
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R P+ A Y+ + +G + + K+ EM GF P V A + AL+ +GM D
Sbjct: 631 KRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGM-D 689
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
E L ++ ++++ + + L++ GN L +M+K
Sbjct: 690 EQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAK 736
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 12/418 (2%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEA 133
C+ K + T +R G +A LF + + + +FN +L + ++ +E+
Sbjct: 75 GCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMES 134
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+L G V + N+ + LC+ R + A+ + + MD PD +Y+ LM
Sbjct: 135 GALLAKVLKRGMSVNKF--TCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLM 191
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
+GLC D ++ EA L R+ +G D Y T++ C + +Q+A ++L+ +
Sbjct: 192 RGLCKDSKVQEAAQYLR----RMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIF 247
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
KG + + C +G D+E A L NEA + P L Y+++ L +G I+
Sbjct: 248 KGFVPDRVTYCSLINGLCAEG-DVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+V++EM G P + Y + L K G + +A V+ + +VKG ++P V +N +
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG-YLPDVFTFNTM 365
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G C A+ +++M G + TY +++GLC+ G+ E + EEM+++
Sbjct: 366 IDGYCKRLKLDSALQLVERMW-MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
P TYN+LI C I + EA + M +PD +++L+ C N DL+
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRN-GDLD 481
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 195/435 (44%), Gaps = 44/435 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR G+L EAV+L +++ + + ++NTL++ + K+SK++ A +LR
Sbjct: 157 IRGLCEGGRLEEAVALVESMDAYIAPD-VVTYNTLMRGLCKDSKVQEA-AQYLRRMMNQG 214
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ N ++D C+ A + ++ F+G PDR +Y L+ GLC + + A
Sbjct: 215 CIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERAL 274
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L F K D+V+Y +L+ LC QG I A+Q++ +++ G P + I
Sbjct: 275 EL----FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH-PDIWTYNI 329
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ +I A ++N+A+++G +P + +++ M ++ ++++ M G
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + L L K G E E EE ++KG P YNIL++ C A
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR-PNAITYNILIENFCKINQLEEA 448
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCR----DGRFL---------------------- 420
+ +MS Q G V + ++ L+ G CR DG +L
Sbjct: 449 SGVIVRMS-QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507
Query: 421 ---------EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
A ++ EM+ + Y P + TY VL+ G C A + L EM+S+ +P
Sbjct: 508 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567
Query: 472 DISVWSSLVASVCCN 486
++ + ++ S+ N
Sbjct: 568 SMATFGRVLNSLAMN 582
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 27/385 (7%)
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRS 167
F C ++N ++ +V + + AH +++R G +R ++ + C R
Sbjct: 4 FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRI--KSFCITGRP 61
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+AL + + + +GC +Y +++GL +A HL M R D+
Sbjct: 62 HVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRR----DVFPDVAT 117
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGA 280
+ +L ALC +G I ++ +L K+L++G+ K CN +G +E A
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFT--------CNIWIRGLCEGGRLEEA 169
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L+ E++ P + +Y+ + L + ++ E + L M +G P Y +
Sbjct: 170 VALV-ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDG 228
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGC 399
K M+ EA E++++ + KG FVP Y L+ GLC G+ A+ ++ + +K +
Sbjct: 229 YCKRDMLQEATELLKDAIFKG-FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLK- 286
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ Y LV GLCR G L A +V+ EM+ P + TYN++I GLC +G +A +
Sbjct: 287 -PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+ + I + LPD+ +++++ C
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYC 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 16/312 (5%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
MD GC P +Y+ +M L N ++A + ++ R+ G D + + + C
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQA----HKVYVRMLSAGVAPDARTHTVRIKSFC 56
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGG 292
G+ A+++L + +G + C G G A+ L +E L R
Sbjct: 57 ITGRPHVALRLLRSLPERGCDVKP-----LAYCTVVRGLYAHGHGYDARHLFDEMLRRDV 111
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P +A+++ + L +G I+E +L ++ +G + + L + G ++EA+
Sbjct: 112 FPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA 171
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++E + P V YN L++GLC A YL++M Q GC+ + TY ++DG
Sbjct: 172 LVES--MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ-GCIPDDFTYNTIIDG 228
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ EA+ +L++ + + + P TY LI GLC+ G A+ E ++ PD
Sbjct: 229 YCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288
Query: 473 ISVWSSLVASVC 484
+ V++SLV +C
Sbjct: 289 LVVYNSLVKGLC 300
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 186/426 (43%), Gaps = 8/426 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + +++ E + + +M C D + T I Y + L EA L K+
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V ++ +L+ + E +E A LF ++K + N L+ LC+
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELF-NEAQAKDLKPDLVVYNSLVKGLCRQGLI 305
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V EM GC+PD +Y+I++ GLC +++A ++ KG D+
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI----VKGYLPDVFT 361
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ T++ C + K+ A+Q++E++ G+ + + C G+ E E
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE-VNETFEEM 420
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+++G P+ +Y+ + + ++ E V+ M G P + + + ++G +
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D A + ++ KG + T +NIL+ N +A +M + G + TY
Sbjct: 481 DGAYLLFQKLDEKG-YSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYR 538
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+LVDG C+ A L EM+ + + P + T+ ++ L + EAV + M+
Sbjct: 539 VLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRM 598
Query: 468 AKLPDI 473
+P++
Sbjct: 599 GVVPEV 604
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 13/256 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S++ L ++ + E+ E ++M C + I + + QL EA + +S
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q V T SFNTL+ + L+ A++LF + G+ + + N+L+
Sbjct: 457 QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA--DTFNILIGAYSSKLN 514
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A +F EM +G PD +Y +L+ G C ++ A Y + KG +
Sbjct: 515 MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRA----YVHLAEMVSKGFVPSMA 570
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L +L ++ +A+ I+ ++R G+ P+ +D D ++I K L+ E
Sbjct: 571 TFGRVLNSLAMNHRVSEAVAIIHIMVRMGV-VPEV----VDTILSTDKKEIAAPKILVEE 625
Query: 287 ALIRGGIPSLASYSAM 302
+ +G I S +Y +
Sbjct: 626 LMKKGHI-SYPTYEVL 640
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 198/421 (47%), Gaps = 12/421 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++++M+ + ++T I R G + A+ ++L N + +N ++ +
Sbjct: 276 EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
K+ +L+ A + ++SC + + + ++L+ C+ + L++ +EM +
Sbjct: 336 CKKGELDEALKVLEEMKSC---GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME 392
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P SY L GLC +RL++ + +F + G D Y L+ C QG +
Sbjct: 393 PSLVSYSSLFHGLCK-KRLSDIS---LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A +++E+++R L S + C G + A N L G +PS+A+ + +
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWV-NALEFFNMMLEGGILPSIATCNVII 507
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
EGR+ E +++EM+T+G +P+L Y A + L K+ + ALE+ M+K
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL-MLKRNV 566
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P+V VY+ L+ G NS A+M +M K +G + Y IL++ LC R EA
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLK-IGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ ++M P +Y +I G C IG +A EM+ + LP + ++SLV
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Query: 484 C 484
C
Sbjct: 686 C 686
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 187/460 (40%), Gaps = 71/460 (15%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQ-------------------SFNTLL 122
F T + A AG E +L +++ +N VN F+ L+
Sbjct: 127 FRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLI 186
Query: 123 KEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K S LE A +FL++ G E+ +R S N L+ L + R + +F+EM G
Sbjct: 187 KVFAANSMLENAVDVFLQAKKTGLELSTR--SCNFLLKCLAEANRREFLRSLFEEMKSTG 244
Query: 182 CYPDRESYHILMKGLCN------DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
P+ +Y I+M C D +AT +L M + G +V Y T ++ L
Sbjct: 245 PPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEM----ERNGESPTVVTYSTYIYGL 300
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-P 294
C G ++ A+ + ++ + I C GE E K L E + GI P
Sbjct: 301 CRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL--EEMKSCGISP 358
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +YS + +G + +G +++EM+ PSLV Y + L K + D +L++
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418
Query: 355 E----------------------------------EEMVKGTFVPTVRVYNILLKGLCDA 380
EEMV+ P + L+ G C
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ + M + G + + T +++D CR+GR EA ++ EM + +P + T
Sbjct: 479 GLWVNALEFFNMMLEG-GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
YN +I LC K A+ M+ + LP + V+S+L+
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 175/424 (41%), Gaps = 41/424 (9%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I + G+L+EA+ + + + +++ L+ K+ +E L
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
Y ++ + S + L LC+ R SD++L +F+++ G D+ +Y IL+KG C L
Sbjct: 388 YS-NMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A L+ M + D + +L+ C G +A++ +L G+ +
Sbjct: 447 DSAHKLMEEMV----RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I C +G +E A +L+NE +G P+L +Y+A+ L E + ++ M
Sbjct: 503 CNVIIDAHCREGR-VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM 561
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ PS+V+Y + K +AL ++ M+K P + Y IL+ LC
Sbjct: 562 LKRNVLPSVVVYSTLIDGFAKQSNSQKAL-MLYARMLKIGVTPDMVAYTILINILCHRSR 620
Query: 383 SAVAVMYLKKMSK----------------------------------QVGCVANGETYGI 408
A KKM++ Q G + TY
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
LVDG C+ R A +++EM + P V TYNVLI G +A+ L EM
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740
Query: 469 KLPD 472
LPD
Sbjct: 741 VLPD 744
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 169/368 (45%), Gaps = 9/368 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L++ + L + K++ +L IF++ Y+++ Y+ +I +
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGA--AGYKYDQTAYSILIKGFCMQGDLDSAH 450
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++++M ++ S F + + + + G A+ F + + + + N ++
Sbjct: 451 KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAH 510
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+E ++E A + + + + + N +++ LC+ R+S+ AL +F M + P
Sbjct: 511 CREGRVEEA-LNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y L+ G +A L + R+ + G D+V Y L+ LC + ++ +A
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALML----YARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ +K+ G+ K + C G D+ A +L NE L RG +P++ +Y+++
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIG-DMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
RI D ++DEM+ KG P +V Y +AA + G +D+ALE++ EM + +P
Sbjct: 685 YCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML-NEMKENGVLP 743
Query: 366 TVRVYNIL 373
Y +L
Sbjct: 744 DHMTYMML 751
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 122 LKEMVKESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++ M + S++ H+L + WEV I+ + M R D V
Sbjct: 75 IRVMKRRSRIHRKHVLSPVVVKVFKSLNWEVARHIK-FSTTMKKYGFSRSIDAFRTVVNV 133
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
+ G + E Y +L +C ++N L+ + S K + ++++ L+
Sbjct: 134 LALAGMH--MEVYALLRDIVCYYNKVNLDAFELFPILLE-SPKDAARSVIVFDLLIKVFA 190
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+++A+ + + + GL+ +R L + E +SL E G P++
Sbjct: 191 ANSMLENAVDVFLQAKKTGLEL-STRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNV 249
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ M ++ Y +G E D + T+ +A E++EE
Sbjct: 250 FTYTIM-MNFYCKGNFGEAD-----IDTR-----------------------QATEILEE 280
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M + PTV Y+ + GLC G A+ +++ + G V N Y ++ GLC+
Sbjct: 281 -MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLV-NVYCYNAIIHGLCKK 338
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G EA +VLEEM P V TY++LI G C G + + +EEM P + +
Sbjct: 339 GELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSY 398
Query: 477 SSLVASVC 484
SSL +C
Sbjct: 399 SSLFHGLC 406
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
S+++++ + + M++ A++V + G + T R N LLK L +A
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELST-RSCNFLLKCLAEANRREFLRSL 236
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEA-------SRVLEEMLIRSYWPCVETYN 442
++M K G N TY I+++ C+ G F EA + +LEEM P V TY+
Sbjct: 237 FEEM-KSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEILEEMERNGESPTVVTYS 294
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
I GLC +G A+ ++ +IS L ++ +++++ +C +L+ K LE++ S
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLC-KKGELDEALKVLEEMKS 353
Query: 503 C 503
C
Sbjct: 354 C 354
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 210/470 (44%), Gaps = 28/470 (5%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ + +EK N R N + S+I + +R+ + + D+MK S++
Sbjct: 154 ACELIETMEEK--NVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVI 211
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + +A+ L+ + F + L+ KE +L F +
Sbjct: 212 IGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTC---FFEEMHEDMD 268
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY----------------PDRESYH 190
K+ N +++ L A H+ Q + C P+ ++
Sbjct: 269 PKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFS 328
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
I++ GL L+ A L F +++ G D+++Y L+ LC ++Q++ +L++
Sbjct: 329 IVINGLIKTGDLDLAVGL----FRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQE 384
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ G++ + I C C DI GA L+ + I G +P + +++ +L G
Sbjct: 385 MEESGIEPTSFTNNCIFGCLCRR-HDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHG 443
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ VE K L +M +GF P +V Y A L L K VD+AL++ ++ +G + P V Y
Sbjct: 444 KEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG-YCPDVIAY 502
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NIL+KGLC A A L +M ++ G V + TY L+DGLC+ EA L M+
Sbjct: 503 NILIKGLCKTQRIAEAQNLLHEMEEK-GLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMI 561
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P V TY+ LI GLC+ G+ +A++ EM + P + + +
Sbjct: 562 EKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFI 611
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 194/468 (41%), Gaps = 42/468 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M ILS + + ++ + + C IR AG + EA LF + +
Sbjct: 1 MASILSRARQKAPLRALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMG 60
Query: 111 -CVNWTQSFNTLLKEMVK-------ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
CV + S+ LL+ + K E +L+ H +GW +L ++ V C
Sbjct: 61 LCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHD------HGWGFDK--YTLTPVLQVYC 112
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D AL VF E+ +G + D + IL+ ++++A L+ +M +K
Sbjct: 113 NMAEFDKALDVFNEIHDRG-WVDEYVFSILVLAFSKWGKVDKACELIETM----EEKNVR 167
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ + +L++ + ++ A+ + +K+ + G P + + + +D++ A
Sbjct: 168 LNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGF-TPDISLYDVIIGGLCVNKDVKKALC 226
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIV-EGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L +E P + + + E + +++ ++M K S ++Y + L +L
Sbjct: 227 LYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKA---STLLYNSVLNSL 283
Query: 342 FKDGMVDEALEVIEEEMV---------------KGTFVPTVRVYNILLKGLCDAGNSAVA 386
+G V +A +++ + K P ++I++ GL G+ +A
Sbjct: 284 VDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLA 343
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
V + M++ +GC + Y L+DGLC R E+ +L+EM P T N +
Sbjct: 344 VGLFRDMAR-IGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFG 402
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
LC A+ L++M +P I +SLV +C + ++ C+
Sbjct: 403 CLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACK 450
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 194/399 (48%), Gaps = 13/399 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + R+G+ +A + + L V ++N L+ K +++ A + R
Sbjct: 149 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLER----MS 204
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N ++ LC + A+ V + CYPD +Y IL++ CND + +A
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M +KG D+V Y L+ +C +G++ +A++ L + G + P H I
Sbjct: 265 KLLDEM----RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQ-PNVITHNI 319
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L C+ G ++ A+ L+ + L +G PS+ +++ + L + + VL++M
Sbjct: 320 ILRSMCSTGRWMD-AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 378
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ + Y L ++ +D A+E +E + +G + P + YN LL LC G +
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY-PDIVTYNTLLTALCKDGKADA 437
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AV L ++S + GC TY ++DGL + G+ A+ +LEEM + P + TY+ L+
Sbjct: 438 AVEILNQLSSK-GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
RGL GK EA+ +M + P +++++ +C
Sbjct: 497 RGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 196/420 (46%), Gaps = 53/420 (12%)
Query: 107 SQFNCVNWTQSF-----NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
S N VN ++SF N L+++V+ +LE R Y ++ I +L+
Sbjct: 94 SSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRG-F 152
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ ++ A + + ++ G PD +Y++L+ G C +++A +L M
Sbjct: 153 CRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM-------SV 205
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGA 280
D+V Y T+L +LCD GK+++AM++L++ +++ P + I + CND + A
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQREC-YPDVITYTILIEATCND-SGVGQA 263
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRI---------------------------- 312
L++E +G P + +Y+ + + EGR+
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323
Query: 313 -------VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
++ +++L +M KG PS+V + + L + ++ A++V+E+ M K +P
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK-MPKHGCMP 382
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
YN LL G C A+ YL+ M + GC + TY L+ LC+DG+ A +
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR-GCYPDIVTYNTLLTALCKDGKADAAVEI 441
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
L ++ + P + TYN +I GL +GK A LEEM + PDI +S+L+ + C
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGC 501
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 197/406 (48%), Gaps = 19/406 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--- 137
+ I Y ++G++++A+ + + +S V ++NT+L+ + KL EA +L
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSVAPDV---VTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R CY + + +L++ C A+ + EM +GC PD +Y++L+ G+C
Sbjct: 236 MQRECY-----PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ RL+EA L +M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 291 KEGRLDEAIKFLNNMPLY----GCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC- 345
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+P I + + A ++ + G +P+ SY+ + E ++ +
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L+ M ++G +P +V Y L AL KDG D A+E++ + KG P + YN ++ GL
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC-SPVLITYNTVIDGL 464
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G + A L++M ++ G + TY L+ GL +G+ EA ++ +M S P
Sbjct: 465 TKVGKTEYAAELLEEMRRK-GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPS 523
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN ++ GLC + A+ +L M+ + P + ++ L+ +
Sbjct: 524 AVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 172/383 (44%), Gaps = 55/383 (14%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
+E YP+ Y +I + + + +++D+M+ C+ + I + G
Sbjct: 238 RECYPDV----ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL---FLRSCYGWEVKSR 150
+L+EA+ N+ + C + N +L+ M + ++A +L + C
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC-----SPS 348
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L++ LC+ R A+ V ++M GC P+ SY+ L+ G C +++++ A L
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M R G DIV Y TLL ALC GK A++IL ++ K
Sbjct: 409 IMVSR----GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK---------------- 448
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G P L +Y+ + L G+ ++L+EMR KG P
Sbjct: 449 --------------------GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y L L +G VDEA+++ + M + P+ YN ++ GLC A ++ A+ +L
Sbjct: 489 IITYSTLLRGLGCEGKVDEAIKIFHD-MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 547
Query: 391 KKMSKQVGCVANGETYGILVDGL 413
M ++ GC TY IL++G+
Sbjct: 548 AYMVEK-GCKPTKATYTILIEGI 569
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 184/402 (45%), Gaps = 11/402 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +IG +S I + +V+++M S + T +R+ +G+L EA+ +
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ L++ +S + A L L K + + N+L++ +C+ R
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKL-LDEMRKKGCKPDVVTYNVLINGICKEGR 294
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ M GC P+ +++I+++ +C+ R +A LL M +KG +V
Sbjct: 295 LDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML----RKGCSPSVV 350
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ LC + + A+ +LEK+ + G P S + L + ++ A +
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGC-MPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG P + +Y+ + L +G+ ++L+++ +KG P L+ Y + L K G
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A E++EE KG P + Y+ LL+GL G A+ M + + + TY
Sbjct: 470 TEYAAELLEEMRRKG-LKPDIITYSTLLRGLGCEGKVDEAIKIFHDM-EGLSIKPSAVTY 527
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++ GLC+ + A L M+ + P TY +LI G+
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + + E+++Q+ C + T I + G+ A L + +
Sbjct: 421 TYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +++TLL+ + E K++ A +F G +K + N +M LC+ ++
Sbjct: 481 RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF-HDMEGLSIKPSAVTYNAIMLGLCKAQQ 539
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ A+ M +GC P + +Y IL++G+ +
Sbjct: 540 TSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F +R AG+ A+ L + + + N V ++NT++ +++AA +
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMRE 170
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ + ++ C+ R D A+ VF EM +G P+ Y+ L+ G C+
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+ T LLY R+ ++G + Y L+ AL G+ +A +++E++ KGL AP
Sbjct: 231 GKLD--TALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL-AP 285
Query: 260 KSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I + C +G +++ A + RG ++ +Y+A+ L +G++ E DK+
Sbjct: 286 DVFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DE +G P LV+Y A + + G +D A E++ E M K P YN L++GLC
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLC 403
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + +M+++ G + TY L+ G G +A R+ EM+ + + P +
Sbjct: 404 LLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 462
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN LI+GLC G+ +A ++EM+ PD S + SL+
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 193/422 (45%), Gaps = 30/422 (7%)
Query: 84 ATAIRTYARAGQLN------------------EAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
AT++R Y+R L+ A +LF ++ + T +FN +L+ +
Sbjct: 65 ATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHL 124
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYP 184
K A + LR + + N ++ C R AL + +EM + G P
Sbjct: 125 CSAGK-PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
++ +Y ++ G C R++EA + M + K + V+Y L+ CDQGK+ A
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTA 236
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++++ +G+ + + + DG E A L+ E +G P + +Y+ +
Sbjct: 237 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLAPDVFTYNILIN 295
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG + + ++ + M +G ++V Y A + AL K G V E ++ +E + +G
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG-IR 354
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +YN L+ +GN A + +M K+ + TY L+ GLC GR EA +
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARK 413
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++EM R P + TYN LI G G +A+ EM+++ P + +++L+ +C
Sbjct: 414 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 473
Query: 485 CN 486
N
Sbjct: 474 KN 475
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 182/429 (42%), Gaps = 51/429 (11%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-V 82
P AL++ ++ R N Y ++I R+ +++ +M+ +
Sbjct: 130 PARALELLRQMP------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 183
Query: 83 FATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I + + G+++EAV +F L++ +N L+ + KL+ A +L+
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA-LLYRDR 242
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + NLL+ L R A + +EM +G PD +Y+IL+ G C +
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A + F +S++G +V Y L++AL +G++Q+
Sbjct: 303 VKKALEI----FENMSRRGVRATVVTYTALIYALSKKGQVQET----------------- 341
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
L +EA+ RG P L Y+A+ G I +++ E
Sbjct: 342 -------------------DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P V Y + L G VDEA ++I+E +G P + YN L+ G G
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG-IQPDLVTYNTLISGYSMKG 441
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ +M + G TY L+ GLC++G+ +A +++EM+ P TY
Sbjct: 442 DVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 500
Query: 442 NVLIRGLCS 450
LI GL +
Sbjct: 501 ISLIEGLTT 509
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 1 MSVRWPRLLTPTYLSQI--IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
MS R R TY + I + K+ K+F EA + R + +Y ++I S S
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR--GIRPDLVLYNALINSHSTS 370
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
I E++ +M+ D + T +R G+++EA L +++ ++
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430
Query: 119 NTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
NTL+ + ++ A L +R+ + + N L+ LC+ + D A ++ +EM
Sbjct: 431 NTLISGYSMKGDVKDA--LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488
Query: 178 DFQGCYPDRESYHILMKGLCND 199
G PD +Y L++GL +
Sbjct: 489 VENGITPDDSTYISLIEGLTTE 510
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 200/411 (48%), Gaps = 23/411 (5%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH--- 135
D F + + ++R + LF ++ + T ++N L++ + + + L A
Sbjct: 93 DRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYL 152
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L +RS GW + + N L+ C+ ++ ++A +F +M F+G D SY L++G
Sbjct: 153 SLMVRS--GW--RPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEG 208
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R++EA L M + D+ + L+ LCD G+ ++ + +L+K+ G
Sbjct: 209 FCEAGRIDEALELFREM--------TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELG 260
Query: 256 LKAPKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ P +R + +DL C + + E A+ ++NE G +P + + + + EGR+
Sbjct: 261 WR-PTTRAYAALVDLW-CRE-QKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMS 317
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+V + MR KG P++ Y A + G V +A+ ++++ M + P V YN+L
Sbjct: 318 GAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ-MRECGVEPDVVTYNLL 376
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
++G C G+ A L+ M G A+ TY +L+D LC+ G+ EA + + + R
Sbjct: 377 IRGQCIDGHIGSAFRLLRLMEGN-GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T+N +I GLC GK A +LE MIS PD +S + ++C
Sbjct: 436 IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 192/438 (43%), Gaps = 12/438 (2%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
K + + + YA++I E+ RI E E+ +M + A ++ AG
Sbjct: 189 KMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAG 244
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+ E + + + + + T+++ L+ +E K E A + L + + + +
Sbjct: 245 RGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKI-LNEMFDSGLMPCVVTC 303
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
++++ C+ R A+ VF+ M F+GC P+ +Y+ +++G CN ++ +A LL M
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM-- 361
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G D+V Y L+ C G I A ++L + GL A + + + C G
Sbjct: 362 --RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++ A SL + RG P+ +++ + L G+ L+ M + G+ P Y
Sbjct: 420 K-VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTY 478
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ L K E L I+E M++ P+ Y I++ L + N +A +M
Sbjct: 479 SPFIENLCKTKGSQEGLFFIDE-MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q GC + TY V C +GR EA V+ EM YN LI G SIG+
Sbjct: 538 SQ-GCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596
Query: 455 YEAVMWLEEMISQAKLPD 472
AV L+ M A +P+
Sbjct: 597 DRAVTILKHMTGVASMPN 614
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 20/368 (5%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+FN+L+ + +LE AH LF + + + + S L++ C+ R D AL +F+E
Sbjct: 166 TFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAV-SYAALIEGFCEAGRIDEALELFRE 224
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---FWRISQKGSGEDIVIYRTLLF 233
M PD ++ L+KGLC+ R E +L M WR + + Y L+
Sbjct: 225 MT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA-------YAALVD 273
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
C + K ++A +IL ++ GL + C +G + GA + +G
Sbjct: 274 LWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR-MSGAVRVFESMRFKGCE 332
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+A+ N G++ + +LD+MR G P +V Y + DG + A +
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392
Query: 354 IEEEMVKGTFVPTVR-VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ +++G + + YN+L+ LC G A + + G N T+ +++G
Sbjct: 393 LR--LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVING 449
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+ G+F A LE M+ Y P TY+ I LC E + +++EM+ + P
Sbjct: 450 LCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS 509
Query: 473 ISVWSSLV 480
++ ++
Sbjct: 510 TVNYTIVI 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 200/504 (39%), Gaps = 67/504 (13%)
Query: 35 KEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAG 94
K K +R YA+++ + + E ++++++M + Y R G
Sbjct: 255 KMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREG 314
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQ 152
+++ AV +F+++ C ++N +++ K+ A L +R C V+ +
Sbjct: 315 RMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMREC---GVEPDVV 371
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ NLL+ C A + + M+ G D+ +Y++L+ LC +++EA S+
Sbjct: 372 TYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC----SL 427
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLC 269
F + +G + V + T++ LC GK A LE ++ G AP + + +LC
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY-APDTYTYSPFIENLC 486
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
++ I+E L + PS +Y+ + L+NE ++ +M ++G P
Sbjct: 487 KTKGSQE---GLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+V Y + A +G +DEA V+ E M K + YN L+ G G + AV
Sbjct: 544 DVVTYTTSVRAYCNEGRLDEAENVVTE-MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602
Query: 390 LKKMS--------------------------------------------------KQVGC 399
LK M+ K+
Sbjct: 603 LKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSV 662
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
++ TY +++G + R E + ++ M + + YN L+ C + +A
Sbjct: 663 PSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
L MI LP++ + L++ +
Sbjct: 723 LLCSMIGHGFLPNLIFYQYLLSGL 746
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 173/420 (41%), Gaps = 28/420 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L ++ ++ E + D ++ F T I +AG+ + A + +N+
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
T +++ ++ + K +K + F+ +VK + ++++ L R
Sbjct: 467 ISAGYAPDTYTYSPFIENLCK-TKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LA ++ +M QGC PD +Y ++ CN+ RL+EA +++ M + + D +
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEM----KKCRTIVDAM 581
Query: 227 IYRTLLFALCDQGKIQDAMQILEKI-------------LRKGLKAPKSRRHRIDLCPCND 273
Y TL+ G+ A+ IL+ + + + + L +
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSV 641
Query: 274 GEDIEGAKSL-INEALIRGGIPSLA-SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ IE A + E + + +PS A +Y ++ E R+ E ++ M+ + +
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNE 701
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
+Y A + K M +A ++ M+ F+P + Y LL GL G + A +
Sbjct: 702 DIYNALVNCFCKLRMYSDAWALL-CSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRF---LEASRVLEEMLIRSYWPCVETYNVLIRGL 448
S+ + + +++DG R G + +LE+M + P ETY +L L
Sbjct: 761 S-SRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCK---PSDETYAMLTEEL 816
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 26/419 (6%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
+C + VF IR+Y +A +LNE FK L + + + N+LL +VK ++ A
Sbjct: 110 TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLA 169
Query: 135 HILFLRSCYGWEVKSRIQ---------SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
WEV + I +LN++++ LC+ + D +M+ +G + D
Sbjct: 170 ----------WEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFAD 219
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ C + L EA ++ SM S KG + Y ++ LC +G+ A
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSM----SGKGLKPTLFTYNAVINGLCKKGRYVRAK 275
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++L GL + + + + C + +E AK + ++ L RG P L S+S++
Sbjct: 276 GVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLE-AKDIFSDMLHRGVSPDLISFSSLIGV 334
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G + + +M+T G P V+Y + ++GM+ EALE+ ++ + +G +
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V YN +L GLC A A +M ++ G V + T+ L+ G C++G +A +
Sbjct: 395 VV-AYNTILNGLCKKKLLADANALFDEMVER-GVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M ++ P + TYN+LI G C + +A EMIS+ P+ ++ LV C
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYC 511
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 196/434 (45%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + E EV++ M G + + I + G+ A +F +
Sbjct: 222 TYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM 281
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
T ++NTLL E + + A +F + V + S + L+ V +
Sbjct: 282 LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH-RGVSPDLISFSSLIGVSSRNGH 340
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL F++M G PD Y IL+ G C + ++EA + M ++G D+V
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML----EQGCALDVV 396
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+L LC + + DA + ++++ +G+ + C +G ++ A SL
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEG-NMGKALSLFGI 455
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P + +Y+ + + + +++ +EM ++ +P+ + Y + G
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V EA + +EM++ PT+ N ++KG C +G+ + A +L KM + G + TY
Sbjct: 516 VSEAFR-LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE-GVGPDSITY 573
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L++G + +A ++ +M + P V TYNV++ G C G+ EA + L +MI
Sbjct: 574 NTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633
Query: 467 QAKLPDISVWSSLV 480
+ PD S +++L+
Sbjct: 634 RGIDPDRSTYTTLI 647
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 9/360 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L++ + L + + AL F++ K + +Y +I + ++E
Sbjct: 323 PDLISFSSLIGVSSRNGHLDQALMYFRDMKTS--GLVPDNVIYTILINGYCRNGMMSEAL 380
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ D+M C + T + + L +A +LF + + V +F TL+
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGH 440
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE + A LF +K I + N+L+D C+ + A ++ EM + +P+
Sbjct: 441 CKEGNMGKALSLF-GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY IL+ G CN ++EA L M +KG +V T++ C G + A
Sbjct: 500 HISYAILVNGYCNLGFVSEAFRLWDEMI----RKGIKPTLVTCNTVIKGYCRSGDLSKAD 555
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ L K++ +G+ P S + + GE ++ A LIN+ +G P + +Y+ +
Sbjct: 556 EFLGKMISEGV-GPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+GR+ E + +L +M +G P Y + + EA +EM++ FVP
Sbjct: 615 FCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFR-FHDEMLQRGFVP 673
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ EG +R KGF S+ + L L K G VD A EV E + + V
Sbjct: 130 KLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE-IARSGIELNVYTL 188
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NI++ LC +L M +Q G A+ TY L++ CR+G EA V+ M
Sbjct: 189 NIMVNALCKDHKIDDVKPFLIDM-EQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMS 247
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+ P + TYN +I GLC G+ A EM+S PD + +++L+ C N
Sbjct: 248 GKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNN 304
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 208/439 (47%), Gaps = 12/439 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL+ A+++ +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRR 166
+ + N+LL +++ A L + G++ S + N L+ L + R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF--TFNTLIHGLFRHNR 201
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DI 225
+ A+ + M +GC PD +Y I++ GLC ++ A LL M ++G E +
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-----EQGKIEPGV 256
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
VIY T++ ALC+ + DA+ + ++ KG++ + + C CN G A L++
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR-WSDASRLLS 315
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + R P++ ++SA+ EG++VE +K+ DEM + P + Y + +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+DEA + E + K F P V YN L+KG C A + ++MS Q G V N T
Sbjct: 376 RLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVT 433
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+ G + A V ++M+ P + TY++L+ GLC+ GK A++ E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 466 SQAKLPDISVWSSLVASVC 484
PDI ++ ++ +C
Sbjct: 494 RSKMEPDIYTYNIMIEGMC 512
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 205/431 (47%), Gaps = 8/431 (1%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
S++ NRI++ ++ QM + F T I R + +EAV+L +
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C ++ ++ + K ++ A + L+ +++ + N ++D LC + +
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLA-LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL++F EMD +G P+ +Y+ L++ LCN R ++A+ LL M ++ ++V +
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----ERKINPNVVTFS 330
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMIS 389
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ P++ +Y+ + R+ EG ++ EM +G + V Y + F+ D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++ ++MV +P + Y+ILL GLC+ G A++ + + + + TY I+
Sbjct: 450 A-QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIM 507
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++G+C+ G+ + + + ++ P V TY ++ G C G + EA EM +
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 470 LPDISVWSSLV 480
LPD +++L+
Sbjct: 568 LPDSGTYNTLI 578
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 192/407 (47%), Gaps = 14/407 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ + A+ + + +SL + + + +++ L+ + S+L A + +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +LN L++ C R A+ + +M G PD +++ L+ GL R
Sbjct: 144 KLGYE--PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ KG D+V Y ++ LC +G I A+ +L+K+ + ++
Sbjct: 202 ASEAVALV----DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ I CN +++ A +L E +G P++ +Y+++ L N GR + ++L +
Sbjct: 258 IYNTIIDALCN-YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--D 379
M + P++V + A + A K+G + EA E + +EM+K + P + Y+ L+ G C D
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+ A M+ +SK C N TY L+ G C+ R E + EM R
Sbjct: 376 RLDEA-KHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G + A + ++M+S LPDI +S L+ +C N
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 12/348 (3%)
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
++R G R S+N L D+ + D A+++F +M +P + L+ +
Sbjct: 37 FWVRDFSGVRYDYRKISINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAI 91
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ + L+ S+ ++ G ++ Y L+ C + ++ A+ +L K+++ G
Sbjct: 92 AKMNKFD----LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY 147
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + + C+ G I A SL+ + + G P +++ + L+ R E
Sbjct: 148 EPDIVTLNSLLNGFCH-GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++D M KG P LV Y + L K G +D AL ++++ M +G P V +YN ++
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK-MEQGKIEPGVVIYNTIIDA 265
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ N A+ +M + G N TY L+ LC GR+ +ASR+L +M+ R P
Sbjct: 266 LCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V T++ LI GK EA +EMI ++ PDI +SSL+ C
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 176/386 (45%), Gaps = 23/386 (5%)
Query: 110 NCVNWTQSFNTLLKEMVKES-------KLEAAHILFLRSCYGWEVKSR----IQSLNLLM 158
+C W + F+ + + K S KL+ A LF G VKSR I + L+
Sbjct: 34 HCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLF-----GDMVKSRPFPSIVEFSKLL 88
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ + + DL + + ++M G + +Y IL+ C +L+ A +L M +
Sbjct: 89 SAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM----K 144
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G DIV +LL C +I DA+ ++ +++ G + P S +
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ-PDSFTFNTLIHGLFRHNRAS 203
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L++ +++G P L +Y + L G I +L +M P +V+Y +
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL V++AL + E KG P V YN L++ LC+ G + A L M ++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-K 321
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C + EA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
E MIS+ P++ +++L+ C
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFC 407
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 41/313 (13%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I + ++ E +++ D+M S + +++ I + +L+EA +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +C ++NTL+K K +++ LF V + + L+ Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-Q 443
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D A VF++M G PD +Y IL+ GLCN+ ++ A +F + +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA----LVVFEYLQRSKMEP 499
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y ++ +C GK++D + + KG+K
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK-------------------------- 533
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+ M +G E D + EM+ +G P Y + A +
Sbjct: 534 ----------PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 344 DGMVDEALEVIEE 356
DG + E+I E
Sbjct: 584 DGDKAASAELIRE 596
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 227/532 (42%), Gaps = 63/532 (11%)
Query: 9 LTPTYLSQ-IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P ++S+ ++K + P +ALK FKEA + +RH Y + IL + + V
Sbjct: 92 LAPIWVSKALVKLKGDPKSALKFFKEAGAR-AGFRHAAESYCVLAHILFCGMFYLDARSV 150
Query: 68 IDQ-------MKG-----------DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
I + G + C VF T G L EA F +++F
Sbjct: 151 IKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKF 210
Query: 110 NCVNWTQSFNTLLKEMVKESK-----------------------------------LEAA 134
+ +S N LL + K SK LEAA
Sbjct: 211 RVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAA 270
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
LF ++ I + N L+D + A+ VF+EM GC PD +Y+ L+
Sbjct: 271 RSLF-EEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLIN 329
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
C R+ +A L+ M Q+G ++V Y TL+ A C G + +A + ++R
Sbjct: 330 CFCKFERIPQAFEYLHGM----KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
GL+ + + C G D+ A L +E G ++ +Y+A+ L +GR+ E
Sbjct: 386 GLQPNEFTYTSLIDANCKIG-DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMRE 444
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+++ + G+ + +Y + K M+++A++++EE M K P + +Y +
Sbjct: 445 AEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE-MNKKNLKPDLLLYGTKI 503
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC ++ +++M G AN Y L+D + G+ EA +L+EM
Sbjct: 504 WGLCRQNEIEDSMAVIREM-MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TY VLI GLC IG +AV + + M P+I ++++L+ +C N
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 182/434 (41%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +IG L+ + + + ++MK + + I Y + G L AVS+F+ +
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N+L+ K ++ A +L ++ + + + L+D C+
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQA-FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A F +M G P+ +Y L+ C LNEA L M Q G +IV
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM----QQAGVNLNIV 427
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y LL LC+ G++++A ++ +L+ G + + + +E A ++ E
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL-FHGYIKAKMMEKAMDILEE 486
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P L Y L + I + V+ EM G + +Y + A FK G
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
EA+ +++E G + TV Y +L+ GLC G AV Y M++ G N Y
Sbjct: 547 TTEAVNLLQEMQDLGIKI-TVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN-GLQPNIMIY 604
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC++ EA + EML + P Y LI G G EA+ M+
Sbjct: 605 TALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664
Query: 467 QAKLPDISVWSSLV 480
D+ ++SL+
Sbjct: 665 IGMELDLCAYTSLI 678
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 210/514 (40%), Gaps = 48/514 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + + ++ A +F+E K K R + Y S+I + +T
Sbjct: 249 PSVFTYNMVIGCLAREGDLEAARSLFEEMKAK--GLRPDIVTYNSLIDGYGKVGMLTGAV 306
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V ++MK CE + + I + + ++ +A + Q +++TL+
Sbjct: 307 SVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K L A+ F+ ++ +Q + L+D C+ + A + EM G
Sbjct: 367 CKAGMLLEANKFFVDM-----IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMF---WRISQ-------------------- 218
+ +Y L+ GLC D R+ EA L ++ W ++Q
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481
Query: 219 --------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
K D+++Y T ++ LC Q +I+D+M ++ +++ GL A +
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G+ E A +L+ E G ++ +Y + L G + + + D M G P+
Sbjct: 542 FKVGKTTE-AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+++Y A + L K+ ++EA + E + KG P VY L+ G GN A+
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKG-ISPDKLVYTSLIDGNMKHGNPGEALSLR 659
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M ++G + Y L+ G R G+ A +L+EML + P L+R
Sbjct: 660 NRMV-EIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYE 718
Query: 451 IGKQYEAVMWLEEMISQAKLP---DISVWSSLVA 481
+G EA+ ++M + + DI+V S L A
Sbjct: 719 LGDINEALALHDDMARRGLISGTIDITVPSCLTA 752
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 208/455 (45%), Gaps = 31/455 (6%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
YPN Y MI L + R E E+ ++MK + CE +++ I G ++
Sbjct: 252 YPNV----VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVD 307
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
AV ++K + + + V ++N LL + K++ + L++ G E + S N+
Sbjct: 308 GAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVM--MGKENCHNVVSYNIF 365
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ L + R+ + A+ V++ + +G D +Y +L+ GLC + LN+A +L
Sbjct: 366 IRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK----EAK 421
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP--CND-- 273
G D Y +++ L QG++ +A+ I+ ++ + G +L P CN
Sbjct: 422 DGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG----------CELSPHVCNPLI 471
Query: 274 -----GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+E A E +G P++ SY+ + L R + + EM K +
Sbjct: 472 NGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWK 531
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P ++ Y + L + +D AL + + +VKG P V ++NIL+ GLC AG A++
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG-LEPDVTMHNILMHGLCSAGKIEDALL 590
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
M KQ C+ N T+ L+DGL + AS + M + P + +YN+ ++GL
Sbjct: 591 LYSNM-KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL 649
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
CS G+ + + ++ + LP W LV +V
Sbjct: 650 CSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 245/555 (44%), Gaps = 84/555 (15%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V P+ L+ L +++K +KSP +AL +F A + P Y H+ ++ ++ LS+ +
Sbjct: 2 VELPKPLSARQLFKLLKAEKSPKSALALFDSASRQ-PGYTHSPHIFLLILRRLSDPKLVV 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ +++ +K C+C + V T ++ YA++ NEA+ F+ + + F C +S+N L
Sbjct: 61 HVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNAL 120
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR--------------- 166
L ++ + LE A FL + +Q+ N+L+ + + R+
Sbjct: 121 LNAFIEANLLEKAES-FLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKD 179
Query: 167 ------------------SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
DL AL VF EM +G PD Y+I++ G
Sbjct: 180 LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGF-----FKRGD 234
Query: 207 HLLYSMFWRISQKGS--GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
++ W KGS ++V Y ++ LC G+ +++++ E++ + +
Sbjct: 235 YVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYS 294
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ +C D +++GA + E + R + + +Y+A+ G+I E + L M
Sbjct: 295 SL-ICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFE-LWVMMG 352
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
K ++V Y + LF++ V+EA+ V E +G+ + Y +L+ GLC G+
Sbjct: 353 KENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADST-TYGVLIHGLCKNGHLN 411
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR-------------------------- 418
A+ LK+ +K G + Y +VDGL + GR
Sbjct: 412 KALKILKE-AKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPL 470
Query: 419 ---FLEASRVLE------EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
F+ AS++ E EM + P V +YN LI GLC + +A +++EM+ +
Sbjct: 471 INGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDW 530
Query: 470 LPDISVWSSLVASVC 484
PD+ +S L+ +C
Sbjct: 531 KPDMITYSLLMDGLC 545
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 200/467 (42%), Gaps = 33/467 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I I + + E K ++D M + + T I ++G L A+ +F
Sbjct: 148 NLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVF 207
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + V +N ++ K ++ R G V + + N++++ LC+
Sbjct: 208 DEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCK 267
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------- 212
R D +L +++ M C D +Y L+ GLC+ ++ A + M
Sbjct: 268 MGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVT 327
Query: 213 -------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
W + K + ++V Y + L + K+++A+ + E + R
Sbjct: 328 YNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRR 387
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+G A + + C +G + A ++ EA G +YS++ L +GR+
Sbjct: 388 RGSGADSTTYGVLIHGLCKNGH-LNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVD 446
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E ++ +M G S + + + ++EA+ E KG PTV YN L
Sbjct: 447 EALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC-SPTVVSYNTL 505
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ GLC A + A ++K+M ++ + TY +L+DGLC+ + A + ++L++
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEK-DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG 564
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V +N+L+ GLCS GK +A++ M LP++ ++L+
Sbjct: 565 LEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 10/307 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ Y +I L ++ + + +++ + K + +++ + ++ G+++EA+ +
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ C N L+ V+ SKLE A I F R + S N L++ LC+
Sbjct: 453 HQMDKYGCELSPHVCNPLINGFVRASKLEEA-ICFFREMETKGCSPTVVSYNTLINGLCK 511
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSG 222
R A +EM + PD +Y +LM GLC ++++ A +L WR + KG
Sbjct: 512 AERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNL-----WRQVLVKGLE 566
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ ++ L+ LC GKI+DA+ +L +++ P H + + E A S
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDAL-LLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMA-S 624
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+I + + G P + SY+ L + GRI +G + D+ G P+ + + + A+
Sbjct: 625 VIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684
Query: 342 FKDGMVD 348
K G +D
Sbjct: 685 LKLGPLD 691
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 46/459 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL+ E E+ + + + S++ + + +++D M + + +
Sbjct: 247 ALRFVLEVSEE--GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL 304
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + G+ +A+ + + + C T ++NTL+ + KE+++EAA L R
Sbjct: 305 ISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL-ARILVSKG 363
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + N L+ LC + D+A+ +F+EM +GC PD +Y IL+ LC +RRL EA
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M G + V+Y TL+ LC +I+DA +I +++ G+ SR
Sbjct: 424 MLLKEM----ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV----SR---- 471
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
S +Y+ + L R+ E +++D+M +G
Sbjct: 472 ----------------------------SSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P Y + L + G +++A ++++ M P + Y L+ GLC AG VA
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQT-MASNGCEPDIFTYGTLIGGLCRAGRVDVA 562
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L+ + + G V Y ++ L R E R+ EM+ +S P T+ ++ R
Sbjct: 563 SKLLRSVQMK-GIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFR 621
Query: 447 GLCSIGKQY-EAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC+ G EA+ + EM+ + LP+ + L +C
Sbjct: 622 GLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 202/474 (42%), Gaps = 37/474 (7%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
H P +++ L++S+ + ++ Q+K + FAT I+++ ++ +
Sbjct: 52 HHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLK 111
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ +N F T +N L +V+++KL+ +L + V + + N+L+ L
Sbjct: 112 ILENELGFK--PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLD-VSTFNVLIKAL 168
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-------- 213
C+ + A+ + +EM G PD ++ LM+G + LN A + M
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTN 228
Query: 214 -----------------------WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+S++G D V + +L+ C G + DA+ I++
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
++ KG + + C GE E A ++ + ++R P+ +Y+ + L E
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGE-FEKAIEILQQMILRECSPNTVTYNTLISALCKEN 347
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I + + +KG P + + + L D A+E+ EE KG P Y
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC-KPDEFTY 406
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+IL+ LC A+M LK+M GC N Y L+DGLC+ R +A + ++M
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESS-GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TYN LI GLC + EA +++MI + PD ++SL+ C
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFC 519
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 208/444 (46%), Gaps = 8/444 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ + Y + L E N++ ++ + +M + S F I+ +A QL A+
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + ++ +F TL++ ++E L A + + G+ S+ +L++
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA-LKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ R + AL E+ +G PD+ +++ L+ G C +N+A ++ M +KG
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI----EKG 293
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ Y +L+ +C G+ + A++IL++++ + + + C + E IE A
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE-IEAA 352
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L + +G +P + +++ + L ++ +EM+ KG P Y + +
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + + EAL +++E G V VYN L+ GLC + A +M + +G
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAV-VYNTLIDGLCKSRRIEDAEEIFDQM-ELLGVS 470
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+DGLC++ R EAS+++++M++ P TYN L+ C +G +A
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 530
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
++ M S PDI + +L+ +C
Sbjct: 531 VQTMASNGCEPDIFTYGTLIGGLC 554
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 204/475 (42%), Gaps = 44/475 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L +++++ ++++M + + F T ++ + G LN A+ + K +
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKS-----------RIQSL 154
+ C+ S L+ KE ++E A L S G+ RI ++
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 155 NLLMDV----------------------LCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
N +D+ +C+ + A+ + Q+M + C P+ +Y+ L
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 193 MKGLCNDRRLNEATHLLYSMFWRI-SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+ LC + + AT L RI KG D+ + TL+ LC AM++ E++
Sbjct: 340 ISALCKENEIEAATDL-----ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
KG K P + I + ++ A L+ E G + Y+ + L R
Sbjct: 395 KNKGCK-PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I + +++ D+M G S V Y + L K+ V+EA +++++ +++G P YN
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG-LKPDKFTYN 512
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
LL C G+ A ++ M+ GC + TYG L+ GLCR GR AS++L + +
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASN-GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ YN +I+ L + E + EM+ ++ PD ++ +V CN
Sbjct: 572 KGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPD-ALTHKIVFRGLCN 625
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 174/361 (48%), Gaps = 8/361 (2%)
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
T++ + K+ ++ LFL G + + + + ++ +C R + A +F EM
Sbjct: 243 TIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G +P+ ++++L+ LC ++ EA HLL M Q+G D Y TL+ C +G
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMI----QRGESPDTFTYNTLIDGFCLEG 357
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+I DA + + KG++ + + C G +E AK L E + + +P++ +Y
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE-AKKLYREMMCKEIMPTVITY 416
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L+ EG++ + + EM+ P Y L L K+ + EA+E+ +
Sbjct: 417 NTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY-LE 475
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
F P+++++N L+ GLC A +A ++S + G N TY +++ GLC+ G+
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE-GLEPNVITYTVMIHGLCKSGQL 534
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
A + M + P + T+N L+RG C + + V L+EM + PD S S +
Sbjct: 535 ENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIV 594
Query: 480 V 480
V
Sbjct: 595 V 595
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 194/410 (47%), Gaps = 18/410 (4%)
Query: 87 IRTYARAGQL--NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCY 143
+++ ++G + +EA S+F +L SFNTLL + K + L+ R S
Sbjct: 62 LKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLI 121
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + +LN+L++ C + D L V EM +G P+ ++ L+KGLC R++
Sbjct: 122 G--LAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRIS 179
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKSR 262
EAT LL M + G ++V Y TLL LC G A+++ E++L G +
Sbjct: 180 EATGLLRKMV----RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIK 235
Query: 263 RHRIDLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C C DG I+ K L E RG P + +YS++ + + GR
Sbjct: 236 PNLVCYCTIIDSLCKDGL-IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ +EM +G P++V + + AL K G ++EA +++ + +G P YN L+ G
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNTLIDGF 353
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A M + G + +Y +L++G C+ GR +EA ++ EM+ + P
Sbjct: 354 CLEGRIDDARDLFVSMESK-GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPT 412
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
V TYN L+ GL GK +A EM P+ ++ L+ +C N
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 26/417 (6%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HI 136
F + ++ +++EA L + + + ++ TLL + A +
Sbjct: 164 TFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM 223
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L +G +K + ++D LC+ D +F EM +G PD +Y ++ G+
Sbjct: 224 LNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGM 283
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C+ R A L F + +G ++V + L+ ALC GK+++A +L+ ++++G
Sbjct: 284 CHTGRWEGAKGL----FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG- 338
Query: 257 KAPKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
++P + + + DG +EG A+ L +G SY+ + GR+
Sbjct: 339 ESPDTFTYNTLI----DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
VE K+ EM K P+++ Y L LF++G V +A + E V P YNI
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH-DLTPESCTYNI 453
Query: 373 LLKGLCDAGNSAVAV---MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
LL GLC + + A+ YL+ Q + + L+DGLC+ + A + +
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSI----QIFNCLIDGLCKARKIEIARELFNRL 509
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P V TY V+I GLC G+ A M + P++ +++L+ C N
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN 566
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 14/376 (3%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T +F +L+K + S++ A L LR + + + L++ LC + LA+ +
Sbjct: 162 TVTFTSLVKGLCLGSRISEATGL-LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLH 220
Query: 175 QEM-DFQGCY-----PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+EM + G + P+ Y ++ LC D +++ L F + +G D+V Y
Sbjct: 221 EEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKEL----FLEMKGRGISPDVVAY 276
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+++ +C G+ + A + +++ +G+ + + C G+ +E A L+ +
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK-MEEANHLLKLMI 335
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
RG P +Y+ + EGRI + + M +KG V Y + K G +
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMV 395
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA ++ E M K +PTV YN LL GL G A +M K TY I
Sbjct: 396 EAKKLYREMMCK-EIMPTVITYNTLLTGLFREGKVRDAWNLFGEM-KVHDLTPESCTYNI 453
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC++ EA + + + P ++ +N LI GLC K A + +
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513
Query: 469 KLPDISVWSSLVASVC 484
P++ ++ ++ +C
Sbjct: 514 LEPNVITYTVMIHGLC 529
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 170/422 (40%), Gaps = 43/422 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + I + KE+ +MKG +++ I G+ A LF
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF---- 296
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
EMV E V + + N+L+D LC+ +
Sbjct: 297 ---------------NEMVDEG-----------------VHPNVVTFNVLIDALCKAGKM 324
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A H+ + M +G PD +Y+ L+ G C + R+++A L SM KG D V
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM----ESKGIETDAVS 380
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C G++ +A ++ +++ K + P + L + A +L E
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEI-MPTVITYNTLLTGLFREGKVRDAWNLFGEM 439
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P +Y+ + L + E ++ + F PS+ ++ + L K +
Sbjct: 440 KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKI 499
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ A E+ +G P V Y +++ GLC +G A M ++ GC N T+
Sbjct: 500 EIARELFNRLSHEG-LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEK-GCAPNLVTFN 557
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ G C++ + +L+EM + + P T ++++ L K E + L +Q
Sbjct: 558 TLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQ 617
Query: 468 AK 469
+
Sbjct: 618 GQ 619
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 212/499 (42%), Gaps = 76/499 (15%)
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCV 112
G L + + ++ + +M+ C + AI +ARAG + A+ F S C
Sbjct: 6 GGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCR 65
Query: 113 N-WTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ + +N LL +++E+ + A ++ +R V + + NLL+ LCQ R D
Sbjct: 66 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKA---GVDPNVYTYNLLIRALCQNDRVDA 122
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------------- 209
A + EM +GC+PD S+ ++ G+C R+ EA L
Sbjct: 123 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 182
Query: 210 ------YSMFWRISQKGSGEDIVIYRTLLFALC--------------------------- 236
+S+ + Q+G ++V Y T++ A C
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242
Query: 237 --------DQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLIN 285
+ GK+ DA+ + ++ +G AP + + + LC D ++GA N
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGW-APSTISYNVLIRGLCCIGD---LKGALDFFN 298
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+P+ +YS + N G + + +EM++ G P++V+Y + L K
Sbjct: 299 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
M D+A E + ++M+ P +N L+ LCD G A+ M + GC N T
Sbjct: 359 MFDQA-ESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRN-GCHPNDRT 416
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+ GL R+G +A ++ EML + + TYN +I LC + + A++ L M+
Sbjct: 417 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 476
Query: 466 SQAKLPDISVWSSLVASVC 484
Q PD +++++ + C
Sbjct: 477 VQGIQPDAFTFNAIIHAYC 495
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 206/505 (40%), Gaps = 77/505 (15%)
Query: 38 YPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
Y N R G Y +I L +++R+ ++++D+M C + T + +
Sbjct: 92 YDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCK 151
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
G++ EA V S+N ++ + E ++ WEV S +
Sbjct: 152 LGRVEEARGFLAET-----VPVQASYNAVVHALCGEFRM-------------WEVFSVVN 193
Query: 153 SL------------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ ++D C+ R +A + M GC P+ ++ L+KG D
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++++A SM+ + +G + Y L+ LC G ++ A+ + R L P
Sbjct: 254 KVHDA----LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL-LPN 308
Query: 261 SRRHRIDLCPCNDGEDIEGA-----------------------------------KSLIN 285
+ + + ++ D++GA +SLI+
Sbjct: 309 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 368
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L+ P+ +++ + L + GR+ V MR G P+ Y L LF++G
Sbjct: 369 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 428
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A ++ E M+ F ++ YN ++ LC A++ L +M Q G + T
Sbjct: 429 NHKDAFAMVIE-MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ-GIQPDAFT 486
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ ++ C++G+ A+ +L +M + V Y +LI LC+ GK A+++L +M+
Sbjct: 487 FNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKML 546
Query: 466 SQAKLPDISVWSSLVASVCCNTADL 490
+ P+ + W+ LV ++ N +
Sbjct: 547 YEGICPNEATWNVLVRAIFTNIGTI 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 213 FWRISQKGSGEDIV-IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F+R S G + V +Y LL AL + + + + + + + G+ P + + +
Sbjct: 56 FYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD-PNVYTYNLLIRAL 114
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ ++ A+ +++E +G P S+ + + GR+ E L E P
Sbjct: 115 CQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQ 169
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y A + AL + + E V+ E MV+ P V Y ++ C A +A L
Sbjct: 170 ASYNAVVHALCGEFRMWEVFSVVNE-MVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 228
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M +GC N T+ LV G DG+ +A + M+ + P +YNVLIRGLC I
Sbjct: 229 RMV-SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 287
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
G A+ + M A LP+ + +S+LV N DL+
Sbjct: 288 GDLKGALDFFNSMKRNALLPNATTYSTLVDGF-SNAGDLD 326
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 195/428 (45%), Gaps = 49/428 (11%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV LF+++ Q + FN L + K + E L L C E K I +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE----LVLALCKQMESKGIAHSIYT 125
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ A ++ G PD ++ L+ GLC + R++EA L+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV---- 181
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G ++ TL+ LC GK+ DA+ ++++++ G
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R ++D C DG ++ A +L NE I+G + +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS-LDNAFNLFNEMEIKGFKADIIT 300
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + N GR +G K+L +M + P++V + + + K+G + EA ++++E M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
+G P YN L+ G C A+ + M + GC + T+ IL++G C+ R
Sbjct: 361 QRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANR 418
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+ + EM +R TYN L++G C GK A +EM+S+ PDI +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 479 LVASVCCN 486
L+ +C N
Sbjct: 479 LLDGLCDN 486
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 190/404 (47%), Gaps = 45/404 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F T + +++EA+ L + + + NTL+ + K+ A +L R
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + +++V+C+ ++ LA+ + ++M+ + D Y I++ GLC D
Sbjct: 220 VETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A +++F + KG DI+ Y TL+ C+ G+ D ++L ++++ +
Sbjct: 279 LDNA----FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS---- 330
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P++ ++S + EG++ E D++L E
Sbjct: 331 --------------------------------PNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P+ + Y + + K+ ++EA+++++ + KG P + +NIL+ G C A
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC-DPDIMTFNILINGYCKAN 417
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ ++MS + G +AN TY LV G C+ G+ A ++ +EM+ R P + +Y
Sbjct: 418 RIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLP-DISVWSSLVASVC 484
+L+ GLC G + E + + I ++K+ DI ++ ++ +C
Sbjct: 477 KILLDGLCDNG-ELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 202/443 (45%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + ++ +++ L R++E E++D+M + T + G++++AV
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + ++ +L M K + A L LR +K ++++D
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL-LRKMEERNIKLDAVKYSIIIDG 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A ++F EM+ +G D +Y+ L+ G CN R ++ LL M R
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR----K 328
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V + L+ + +GK+++A Q+L++++++G+ AP + + ID C N +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFCKENR---L 384
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A +++ + +G P + +++ + RI +G ++ EM +G + V Y
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A ++ +E MV P + Y ILL GLCD G A+ K+ K
Sbjct: 445 VQGFCQSGKLEVAKKLFQE-MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + ++ YN++I LC +A
Sbjct: 504 MELDIG-IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ +M + PD ++ L+
Sbjct: 563 DILFRKMTEEGHAPDELTYNILI 585
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 181/410 (44%), Gaps = 8/410 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y ++ ++ +S + E++ +M+ + + ++ I + G L+ A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+LF + ++NTL+ + + L LR ++ + + ++L+D
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL-LRDMIKRKISPNVVTFSVLIDS 342
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + A + +EM +G P+ +Y+ L+ G C + RL EA ++ M KG
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI----SKG 398
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
DI+ + L+ C +I D +++ ++ +G+ A + + C G+ +E A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK-LEVA 457
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L E + R P + SY + L + G + + ++ ++ + +Y +
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ VD+A ++ +KG + R YNI++ LC + + A + +KM+++ G
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDA-RAYNIMISELCRKDSLSKADILFRKMTEE-GHA 575
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ TY IL+ D A+ ++EEM + V T ++I L S
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K+ A ++ KE ++ N Y S+I + NR+ E
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C+ F I Y +A ++++ + LF+ +S + T ++NTL++
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KLE A LF + V+ I S +L+D LC + AL +F +++ D
Sbjct: 449 CQSGKLEVAKKLF-QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y I++ G+CN ++++A + +F + KG D Y ++ LC + + A
Sbjct: 508 IGIYMIIIHGMCNASKVDDA----WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ +G AP + I L + G+D + + E + G P+ S M I+
Sbjct: 564 ILFRKMTEEG-HAPDELTYNI-LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 306 LYNEGRI 312
+ + G +
Sbjct: 622 MLSSGEL 628
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 190/402 (47%), Gaps = 12/402 (2%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ + GQ+++A+ + S+ TL+ + K + +AA + LR
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA-LELLRRND 325
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V+ + N ++D +C+ + + A ++ E + +PD +Y+ L+ G C +L
Sbjct: 326 GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLK 385
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A L F +++ K D+ + L+ C G I++A +L ++++ +K
Sbjct: 386 DAIDL----FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTY 441
Query: 264 HRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C N+ + A+S+ N RG ++ SY+ M + E K+ E
Sbjct: 442 SSLMDGYCLVNE---VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K +P ++ Y + + L K G + ALE+++E +G P + YN +L LC
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ-QPDIITYNSILDALCKKH 557
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ L K+ Q G + TY ILV GLC+ G+ +A +V E++L++ Y V Y
Sbjct: 558 HVDKAITLLTKLKGQ-GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY 616
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V+I+G C G EA+ L +M +PD + ++ S+
Sbjct: 617 TVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 159/332 (47%), Gaps = 7/332 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S L++ LC+ + AL + + D + PD Y+ ++ G+C D+ +N+A + +
Sbjct: 300 SYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA----FDL 355
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ K D+ Y L+ C GK++DA+ + K+ K + + C
Sbjct: 356 YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
DG +I+ AK+++ + + P + +YS++ + + + + + M +G ++
Sbjct: 416 DG-NIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K MVDEA+++ +E K F P V Y+ L+ GLC +G + A+ + +
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIF-PDVITYSSLIDGLCKSGRISYALELVDE 533
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + G + TY ++D LC+ +A +L ++ + P + TY +L++GLC G
Sbjct: 534 MHYR-GQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A E+++ + D+ ++ ++ C
Sbjct: 593 KLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC 624
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 186/410 (45%), Gaps = 28/410 (6%)
Query: 83 FATAIRTYARAGQLNEAVSLFK----NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ T I + G+ A+ L + L Q + V +NT++ M K+ + A L
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVV----MYNTIIDGMCKDKHVNDAFDL- 355
Query: 139 LRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
Y +V RI + N L+ C + A+ +F +M + PD ++ IL+
Sbjct: 356 ----YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C D + EA ++L M ++ D+V Y +L+ C ++ A I + +
Sbjct: 412 GFCKDGNIKEAKNVLAMMM----KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR 467
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ A + + I + + ++ A L E + P + +YS++ L GRI
Sbjct: 468 GVTA-NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISY 526
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNIL 373
+++DEM +G P ++ Y + L AL K VD+A+ ++ + +KG + P + Y IL
Sbjct: 527 ALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK--LKGQGIRPDMNTYTIL 584
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KGLC +G A + + + G + Y +++ G C G F EA +L +M
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P +TY ++I L + A L EMI + L +++ LVAS+
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL--VALTDDLVASI 691
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 7/305 (2%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD + +KG C ++++A H ++ G D V Y TL+ LC G
Sbjct: 257 NGYEPDTITLTTFIKGFCLKGQIHQALHF----HDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + A+++L + K ++ + I C D + + A L +E + + P + +Y
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKD-KHVNDAFDLYSEKVSKRIFPDVFTY 371
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+A+ G++ + + ++M +K P + + + KDG + EA V+ M+
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM-MM 430
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K + P V Y+ L+ G C A MS + G AN ++Y I+++G C+
Sbjct: 431 KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR-GVTANVQSYNIMINGFCKIKMV 489
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA ++ +EM + +P V TY+ LI GLC G+ A+ ++EM + + PDI ++S+
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549
Query: 480 VASVC 484
+ ++C
Sbjct: 550 LDALC 554
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 138/317 (43%), Gaps = 41/317 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ + I E K V+ M S + +++ + Y ++N+A S+F +S
Sbjct: 406 FSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMS 465
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
QS+ N++++ C+ +
Sbjct: 466 HRGVTANVQSY------------------------------------NIMINGFCKIKMV 489
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+ +F+EM + +PD +Y L+ GLC R++ A L+ M +R G DI+
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR----GQQPDIIT 545
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++L ALC + + A+ +L K+ +G++ + + C G+ +E A+ + +
Sbjct: 546 YNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK-LEDARKVFEDL 604
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L++G + +Y+ M ++G E +L +M G P YE + +LF+
Sbjct: 605 LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDEN 664
Query: 348 DEALEVIEEEMVKGTFV 364
D A +++ E +++G V
Sbjct: 665 DMAEKLLREMIMRGLLV 681
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 66/157 (42%), Gaps = 7/157 (4%)
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
W L++++ K L KD + V+ +F + + +K C + +++
Sbjct: 195 WIVLILWDFKRLFL-KDFLQSRLFNVLH------SFKILIEYHKTFIKQKCLLKSFEISI 247
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
Y + G + T + G C G+ +A ++++ + +Y LI G
Sbjct: 248 EYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLING 307
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC +G+ A+ L + PD+ ++++++ +C
Sbjct: 308 LCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMC 344
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 217/457 (47%), Gaps = 24/457 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + P Y +++ LS+++ + + + M + +R G+L EAV
Sbjct: 114 YAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ ++ C ++NTL+ + +L+ A + K + + N +++
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ R + A VF EM +G PD SY+ L+ G C L+E+ ++F ++Q+G
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES----LAVFSEMTQRG 288
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V + +L+ A C G ++ A+ ++ ++ +GL R + + DG
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL-----RMNEVTFTALIDGF---CK 340
Query: 281 KSLINEALI------RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
K +++AL+ + GI PS+ Y+A+ GR+ +++ EM K P +V
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y ++ K G +D A + + ++M+K +P Y+ L++GLC+ A + M
Sbjct: 401 YSTIISGYCKVGNLDSAFQ-LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
Q+G + TY L+DG C++G +A + +EM+ + P V TY+VLI GL +
Sbjct: 460 -LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
EA L ++ + +PD + +L+ +CC+ A+
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEF 553
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 9/305 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P +Y+ ++ L +D L A L SM + G ++ Y L+ ALC +G+
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSML----RHGVAPNVYTYNILVRALCARGR 167
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASY 299
+++A+ ++ + G + + C GE ++GA+ +++ G P+L ++
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTF 226
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
++M L GR+ KV DEM +G P +V Y L+ K G + E+L V E
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G VP V + L+ C AGN AV + +M ++ G N T+ L+DG C+ G
Sbjct: 287 RG-LVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERGLRMNEVTFTALIDGFCKKGFL 344
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+A +EEM P V YN LI G C +G+ A + EM ++ PD+ +S++
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404
Query: 480 VASVC 484
++ C
Sbjct: 405 ISGYC 409
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 192/455 (42%), Gaps = 56/455 (12%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + N + SM+ L ++ R+ ++V D+M + + T + Y + G L+E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++F ++Q V +F +L+ K LE A + + ++ + L+D
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA-VALVAQMRERGLRMNEVTFTALID 336
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ D AL +EM G P Y+ L+ G C R++ A L+ M K
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM----EAK 392
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
D+V Y T++ C G + A Q+ +K+L+KG+
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV----------------------- 429
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
+P +YS++ L E R+ + ++ + M G P Y +
Sbjct: 430 -------------LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ--- 396
K+G V++AL + +EM++ +P V Y++L+ GL + + A L K+ +
Sbjct: 477 GHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV 535
Query: 397 ---------VGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ C + E + L+ G C G EA +V + ML R++ Y++LI
Sbjct: 536 PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G C G +A+ + ++M+ P+ + SLV
Sbjct: 596 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 207/504 (41%), Gaps = 75/504 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +M+ + RI + + +I+ M F IR G++ +A+++F ++
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMPFPP---DTFTFNPLIRALCVRGRIPDALAVFDDM 277
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C +++ LL KES A L L + I + N+L++ +C
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMAL-LDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW------------ 214
D AL++ + GC PD +Y ++K LC R E LL M
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 215 -------------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+S+ G DIV Y ++L LCD G++ DA+++L ++ G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
K P + + L E E A+ L+ E L P +++ + L +G +
Sbjct: 457 CK-PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+V+++M G P +V Y + L + +D+A+E++ + G P + +N LLK
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGC-KPDIVTFNTLLK 574
Query: 376 GLC------DA-----------------------------GNSAVAVMYLKKMSKQVGCV 400
GLC DA G A+ LK M++ GCV
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN-GCV 633
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY I+VD L + G+ A +L M + P + TYN +I L GK EA+
Sbjct: 634 PNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDL 691
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
L M+S PD + + SL VC
Sbjct: 692 LRVMVSNGLCPDTTTYRSLAYGVC 715
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 185/427 (43%), Gaps = 24/427 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L + + EV+D M C +++ + G++++AV L L
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLC 162
+ C T ++ T+LK + + E A L C EV + N ++ LC
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV-----TFNTVVASLC 507
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q D A+ V ++M GC PD +Y+ ++ GLCN+ +++A LL + G
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL----QSCGCK 563
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG---EDIEG 279
DIV + TLL LC + +DA Q++ ++R + + + C G + IE
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
K + G +P+ ++YS + L G+ ++L M T G P L+ Y ++
Sbjct: 624 LKIMAEN----GCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNGT-PDLITYNTVIS 677
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G ++EAL+++ MV P Y L G+C + AV L+++ + G
Sbjct: 678 NLTKAGKMEEALDLLRV-MVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV-QDTGL 735
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ Y ++ G CRD R A M+ P TY +L+ L G EA
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795
Query: 460 WLEEMIS 466
L + S
Sbjct: 796 LLASLCS 802
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 163/364 (44%), Gaps = 14/364 (3%)
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVK-SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+ +V+ +++ A +LF G + N+L+ LC R A VF +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G +Y+ ++ G C R+ +A L+ M + D + L+ ALC +G+
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP-------PDTFTFNPLIRALCVRGR 266
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
I DA+ + + +L +G +P + I L A +L++E +G P + +Y+
Sbjct: 267 IPDALAVFDDMLHRGC-SPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ + NEG + E +L + + G P V Y L +L E E++ E M
Sbjct: 326 VLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE-MTS 384
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P +N ++ LC G A+ + MS+ GCVA+ TY ++DGLC GR
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH-GCVADIVTYSSILDGLCDVGRVD 443
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A +L + P Y +++GLCS + A + EM+ PD ++++V
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503
Query: 481 ASVC 484
AS+C
Sbjct: 504 ASLC 507
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+ ++ L ++ + E++ M + + + T I +AG++ EA+ L
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLI--TYNTVISNLTKAGKMEEALDLL 692
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + T ++ +L + +E + A + LR + N ++ C+
Sbjct: 693 RVMVSNGLCPDTTTYRSLAYGVCREDGTDRA-VRMLRRVQDTGLSPDTTFYNDVLLGFCR 751
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
RR+DLA+ F M GC PD +Y IL++ L L+EA LL S+
Sbjct: 752 DRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 194/404 (48%), Gaps = 10/404 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I ++ GQ+ A+ L + + + + ++ L+ + K+ + A L L S
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA--LGLCS 219
Query: 142 CYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + N L+D C R + +M + PD +++IL+ LC +
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+ EA +L M S++G DIV Y L+ C + + +A ++ +++++GL+ P
Sbjct: 280 RILEAQGVLAMM----SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE-PD 334
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + + ++ A L E + +P++ASY+++ L N GRI K+LD
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM P +V Y + AL K+G + EAL V+ M KG P + YN ++ G C
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV-KPNIVTYNAMMDGYCLR 453
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
N VA +M K G + Y +L++G C+ EA + +EM ++ P + +
Sbjct: 454 NNVNVAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN LI GLC++G+ L+EM + PD+ ++ L+ + C
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 203/476 (42%), Gaps = 82/476 (17%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-- 138
SVF + R G A+SLF L +F L+ +S A L
Sbjct: 56 SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115
Query: 139 -LRSCY------------GWEVKSRI-QSLNLLMDVLCQCRRSD---------------- 168
L+S Y G+ + I ++L+ ++L Q D
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 169 --LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
ALH+ QEM+ P+ Y L+ GLC D +++A L +I ++G D V
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC----SQIGERGILLDAV 231
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ C G+ Q+ Q+L K++R+ + + + C +G +E A+ ++
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-AQGVLAM 290
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P + +Y+A+ + + E ++ + M +G P ++ Y + K M
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-- 404
VDEA+ V+ +E+ VPT+ YN L+ GLC++G + ++KK+ ++ A
Sbjct: 351 VDEAM-VLFKELCNKNLVPTIASYNSLIDGLCNSGR----ISHVKKLLDEMHGSAQPPDV 405
Query: 405 -TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN--------------------- 442
TY IL+D LC++GR LEA VL M+ + P + TYN
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 443 --------------VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VLI G C EA++ +EM + +PDI+ ++SL+ +C
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 23/442 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I R E+ +++ +M ++ + D F I + G++ EA + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ ++N L++ + A LF R ++ + + N+L+D C+ +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV-KRGLEPDVLNYNVLIDGYCKTKM 350
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--D 224
D A+ +F+E+ + P SY+ L+ GLCN R++ LL M GS + D
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM------HGSAQPPD 404
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGA 280
+V Y L+ ALC +G+I +A+ +L +++KG+K P + + DG ++ A
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVK-PNIVTYNAMM----DGYCLRNNVNVA 459
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL-DEMRTKGFWPSLVMYEAKLA 339
K + N + G P + +Y+ + I+ Y + +V+ VL EMR K P + Y + +
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVL-INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L G + E+++E M P V YNILL C A+ +++ + G
Sbjct: 519 GLCNLGRIPHVQELLDE-MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE--GI 575
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ T +VD LC+ + A L+ +L+ P V+TY +LI LC G EA++
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635
Query: 460 WLEEMISQAKLPDISVWSSLVA 481
L +M + PD + ++
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIG 657
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 189/422 (44%), Gaps = 9/422 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L + RI E + V+ M + + + Y ++EA LF +
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N L+ K ++ A +LF C V + I S N L+D LC R
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT-IASYNSLIDGLCNSGR 385
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ EM PD +Y+IL+ LC + R+ EA +L M +KG +IV
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM----KKGVKPNIV 441
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ C + + A I ++++ GL+ P + + + E ++ A L E
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE-PDILNYNVLINGYCKTEMVDEAIVLFKE 500
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ IP +ASY+++ L N GRI ++LDEM G P ++ Y L A K
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
D+A+ + + +V+G + P + ++ LC +A LK + GC N +TY
Sbjct: 561 FDKAISLFRQ-IVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH-GCSPNVQTY 617
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL++ LC+DG F EA +L +M P T+ ++I L + +A EEMI+
Sbjct: 618 TILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Query: 467 QA 468
+
Sbjct: 678 RG 679
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 213/443 (48%), Gaps = 10/443 (2%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y+ +I +++ V+ +M E ++ + Y + +++EAV+L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ T +FNTL+ + +K A L R + + + ++++ LC
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLC 232
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +DLA ++ +M+ P Y+ ++ GLC + +++A +L F + KG
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL----FKEMETKGIR 288
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V Y +L+ LC+ G+ DA ++L ++ + + + +G+ +E A+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE-AEK 347
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E + R PS+ +YS++ R+ E ++ + M +K +P +V Y +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K V+E +EV E +G TV YNIL++GL AG+ +A K+M G N
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPN 465
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 466 IMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+ + PD+ ++++++ C
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFC 547
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 201/437 (45%), Gaps = 8/437 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL A+++ +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + ++LL ++ A + + + + + N L+ L ++
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEA-VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + M +GC PD +Y +++ GLC T L +++ ++ Q ++I
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCK----RGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC + DA+ + +++ KG++ + C CN G A L+++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDM 317
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P + ++SA+ EG++VE +K+ DEM + PS+V Y + + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA ++ E + K F P V YN L+KG C + ++MS Q G V N TY
Sbjct: 378 DEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYN 435
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+ GL + G A + +EM+ P + TYN L+ GLC GK +A++ E +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 468 AKLPDISVWSSLVASVC 484
P I ++ ++ +C
Sbjct: 496 KMEPTIYTYNIMIEGMC 512
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 205/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N +S++ S RI+E ++DQM + F T I + +EA+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + C ++ ++ + K + A L + G +++ + N ++D
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDG 265
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + D AL++F+EM+ +G P+ +Y L+ LCN R ++A+ LL M ++
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI----ERK 321
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ + L+ A +GK+ +A ++ ++++++ + + C + ++ A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH-DRLDEA 380
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K + + + P + +Y+ + R+ EG +V EM +G + V Y +
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQV 397
LF+ G D A E+ +E MV P + YN LL GLC G + V YL++ SK
Sbjct: 441 LFQAGDCDMAQEIFKE-MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 498
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY I+++G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 499 PTIY---TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+EM LP+ +++L+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLI 578
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRS 141
F+ + A+ + + +SL + + + +++ L+ + S+L A +L
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G P+ +++ L+ GL +
Sbjct: 144 KLGYE--PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ KG D+V Y ++ LC +G A +L K+ + L+
Sbjct: 202 ASEAMALI----DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I LC +D A +L E +G P++ +YS++ L N GR + ++L
Sbjct: 258 IYNTIIDGLCKYKHMDD---ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC- 378
+M + P + + A + A K+G + EA E + +EMVK + P++ Y+ L+ G C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D + A M+ +SK C + TY L+ G C+ R E V EM R
Sbjct: 374 HDRLDEA-KQMFEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN+LI+GL G A +EM+S P+I +++L+ +C N
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 170/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV+LF + + F+ LL + K +K + I + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTY 119
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
++L++ C CRRS L AL V +M G P+ + L+ G C+ +R++EA L+ M
Sbjct: 120 SILIN--CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F G + V + TL+ L K +AM
Sbjct: 178 FV----TGYQPNTVTFNTLIHGLFLHNKASEAM--------------------------- 206
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+LI+ + +G P L +Y + L G +L++M P ++
Sbjct: 207 ---------ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + L K +D+AL + +E KG P V Y+ L+ LC+ G + A L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 317 MIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E M+S+ PD+ +++L+ C
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 194/404 (48%), Gaps = 10/404 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I ++ GQ+ A+ L + + + + ++ L+ + K+ + A L L S
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA--LGLCS 219
Query: 142 CYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + N L+D C R + +M + PD +++IL+ LC +
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+ EA +L M S++G DIV Y L+ C + + +A ++ +++++GL+ P
Sbjct: 280 RILEAQGVLAMM----SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE-PD 334
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + + ++ A L E + +P++ASY+++ L N GRI K+LD
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM P +V Y + AL K+G + EAL V+ M KG P + YN ++ G C
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV-KPNIVTYNAMMDGYCLR 453
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
N VA +M K G + Y +L++G C+ EA + +EM ++ P + +
Sbjct: 454 NNVNVAKDIFNRMVKS-GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN LI GLC++G+ L+EM + PD+ ++ L+ + C
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 203/476 (42%), Gaps = 82/476 (17%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-- 138
SVF + R G A+SLF L +F L+ +S A L
Sbjct: 56 SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115
Query: 139 -LRSCY------------GWEVKSRI-QSLNLLMDVLCQCRRSD---------------- 168
L+S Y G+ + I ++L+ ++L Q D
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 169 --LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
ALH+ QEM+ P+ Y L+ GLC D +++A L +I ++G D V
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC----SQIGERGILLDAV 231
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ C G+ Q+ Q+L K++R+ + + + C +G +E A+ ++
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-AQGVLAM 290
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P + +Y+A+ + + E ++ + M +G P ++ Y + K M
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-- 404
VDEA+ V+ +E+ VPT+ YN L+ GLC++G + ++KK+ ++ A
Sbjct: 351 VDEAM-VLFKELCNKNLVPTIASYNSLIDGLCNSGR----ISHVKKLLDEMHGSAQPPDV 405
Query: 405 -TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN--------------------- 442
TY IL+D LC++GR LEA VL M+ + P + TYN
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 443 --------------VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VLI G C EA++ +EM + +PDI+ ++SL+ +C
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 23/442 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I R E+ +++ +M ++ + D F I + G++ EA + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ ++N L++ + A LF R ++ + + N+L+D C+ +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV-KRGLEPDVLNYNVLIDGYCKTKM 350
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--D 224
D A+ +F+E+ + P SY+ L+ GLCN R++ LL M GS + D
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM------HGSAQPPD 404
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGA 280
+V Y L+ ALC +G+I +A+ +L +++KG+K P + + DG ++ A
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVK-PNIVTYNAMM----DGYCLRNNVNVA 459
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL-DEMRTKGFWPSLVMYEAKLA 339
K + N + G P + +Y+ + I+ Y + +V+ VL EMR K P + Y + +
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVL-INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L G + E+++E M P V YNILL C A+ +++ + G
Sbjct: 519 GLCNLGRIPHVQELLDE-MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE--GI 575
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ T +VD LC+ + A L+ +L+ P V+TY +LI LC G EA++
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635
Query: 460 WLEEMISQAKLPDISVWSSLVA 481
L +M + PD + ++
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIG 657
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 188/418 (44%), Gaps = 9/418 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + RI E + V+ M + + + Y ++EA LF + +
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++N L+ K ++ A +LF C V + I S N L+D LC R
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT-IASYNSLIDGLCNSGRISHV 389
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ EM PD +Y+IL+ LC + R+ EA +L M +KG +IV Y
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM----KKGVKPNIVTYNA 445
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ C + + A I ++++ GL+ P + + + E ++ A L E +
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLE-PDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
IP +ASY+++ L N GRI ++LDEM G P ++ Y L A K D+A
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ + + +V+G + P + ++ LC +A LK + GC N +TY IL+
Sbjct: 565 ISLFRQ-IVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH-GCSPNVQTYTILI 621
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ LC+DG F EA +L +M P T+ ++I L + +A EEMI++
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 210/495 (42%), Gaps = 72/495 (14%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN- 113
L+ + + ++ + +M+ C + AI +ARAG + A+ F S C +
Sbjct: 61 LAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 120
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+ +N LL +++E+ + A + + V + + NLL+ LCQ R D A +
Sbjct: 121 GVRVYNHLLDALLRENMVGAV-VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------------------ 209
EM +GC+PD S+ ++ G+C R+ EA L
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 239
Query: 210 --YSMFWRISQKGSGEDIVIYRTLLFALC------------------------------- 236
+S+ + Q+G ++V Y T++ A C
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299
Query: 237 ----DQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALI 289
+ GK+ DA+ + ++ +G AP + + + LC D ++GA N
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGW-APSTISYNVLIRGLCCIGD---LKGALDFFNSMKR 355
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+P+ +YS + N G + + +EM++ G P++V+Y + L K M D+
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E + ++M+ P +N L+ LCD G A+ M + GC N TY L
Sbjct: 416 A-ESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRN-GCHPNDRTYNEL 473
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GL R+G +A ++ EML + + TYN +I LC + + A++ L M+ Q
Sbjct: 474 LHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGI 533
Query: 470 LPDISVWSSLVASVC 484
PD +++++ + C
Sbjct: 534 QPDAFTFNAIIHAYC 548
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 206/505 (40%), Gaps = 77/505 (15%)
Query: 38 YPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
Y N R G Y +I L +++R+ ++++D+M C + T + +
Sbjct: 145 YDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCK 204
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
G++ EA V S+N ++ + E ++ WEV S +
Sbjct: 205 LGRVEEARGFLAET-----VPVQASYNAVVHALCGEFRM-------------WEVFSVVN 246
Query: 153 SL------------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ ++D C+ R +A + M GC P+ ++ L+KG D
Sbjct: 247 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 306
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++++A SM+ + +G + Y L+ LC G ++ A+ + R L P
Sbjct: 307 KVHDA----LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL-LPN 361
Query: 261 SRRHRIDLCPCNDGEDIEGA-----------------------------------KSLIN 285
+ + + ++ D++GA +SLI+
Sbjct: 362 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 421
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L+ P+ +++ + L + GR+ V MR G P+ Y L LF++G
Sbjct: 422 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 481
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A ++ E M+ F ++ YN ++ LC A++ L +M Q G + T
Sbjct: 482 NHKDAFAMVIE-MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ-GIQPDAFT 539
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ ++ C++G+ A+ +L +M + V Y +LI LC+ GK A+++L +M+
Sbjct: 540 FNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKML 599
Query: 466 SQAKLPDISVWSSLVASVCCNTADL 490
+ P+ + W+ LV ++ N +
Sbjct: 600 YEGICPNEATWNVLVRAIFTNIGTI 624
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 213 FWRISQKGSGEDIV-IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F+R S G + V +Y LL AL + + + + + + + G+ P + + +
Sbjct: 109 FYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD-PNVYTYNLLIRAL 167
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ ++ A+ +++E +G P S+ + + GR+ E L E P
Sbjct: 168 CQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQ 222
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y A + AL + + E V+ E MV+ P V Y ++ C A +A L
Sbjct: 223 ASYNAVVHALCGEFRMWEVFSVVNE-MVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 281
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M +GC N T+ LV G DG+ +A + M+ + P +YNVLIRGLC I
Sbjct: 282 RMV-SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 340
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
G A+ + M A LP+ + +S+LV N DL+
Sbjct: 341 GDLKGALDFFNSMKRNALLPNATTYSTLVDGF-SNAGDLD 379
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 195/410 (47%), Gaps = 18/410 (4%)
Query: 82 VFATAIRTYARAGQLNEAVS-LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFL 139
+F ++ A +++EA L + + +F C S+N LLK + E + E A ++ +
Sbjct: 130 IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHM 189
Query: 140 RSCYG-WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ G + + ++D LC+ + D A VFQ M +G P+ +Y L+ G +
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ E +L M S G D VIY LL LC G+ +A I + ++RKG+K
Sbjct: 250 TGKWKEVVQMLQEM----STHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIK- 304
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLIN---EALIRGGI-PSLASYSAMAIDLYNEGRIVE 314
P + I L G EGA S ++ + ++R G+ P ++ M + I E
Sbjct: 305 PHVTIYGILL----HGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE 360
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ D+MR + P +V Y A + AL K G VD+A+ + +M+ P + V++ L+
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAV-LKFNQMINEGVTPDIFVFSSLV 419
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC A ++ Q G N + IL+ LCR+GR +EA R+++ ML
Sbjct: 420 YGLCTVDKWEKAEKLFFEVLDQ-GIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDV 478
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V +YN L+ G C G+ EA L+ M+S PD +++L+ C
Sbjct: 479 RPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYC 528
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 195/462 (42%), Gaps = 76/462 (16%)
Query: 54 ILSESNRITEMKEVI-DQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+ + ++R E++ VI + + S D++ + TYAR + L +S+ C
Sbjct: 7 VTAAADRCLELERVIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARC 66
Query: 112 VNWTQSFNTLLKEMVKESKLEAA----HILFLRSCY-------------------GWEVK 148
+ ++ +L M++E ++ A L C+ GW +
Sbjct: 67 SSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLN 126
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + L+ LC +R D A + + M GC + SY+IL+KGLCN++R EA
Sbjct: 127 NTV-IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALE 185
Query: 208 LLYSMFWRISQKGSGE---DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
L++ M + G G ++V Y T++ LC + A + + ++ KG++
Sbjct: 186 LMHMM----ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVR------- 234
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
P+ +Y+ + + G+ E ++L EM T
Sbjct: 235 -----------------------------PNNHTYTCLIHGYLSTGKWKEVVQMLQEMST 265
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P V+Y L L K+G EA + + + KG P V +Y ILL G G +
Sbjct: 266 HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKG-IKPHVTIYGILLHGYATEGALS 324
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW--PCVETYN 442
+L M + G + + I+ + + EA + ++M R W P V Y
Sbjct: 325 EMHSFLDLMVRN-GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM--RQQWLSPGVVNYG 381
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI LC +G+ +AV+ +MI++ PDI V+SSLV +C
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 190/444 (42%), Gaps = 13/444 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQM--KGDSCECKDSV-FATAIRTYARAGQLNEAVSLFK 104
Y ++ L R E E++ M GD + V + T I +A ++ A +F+
Sbjct: 167 YNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ ++ L+ + K E +L S +G + I ++ L+D LC+
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAV--LLDYLCK 284
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A ++F + +G P Y IL+ G + L+E ++S + + G
Sbjct: 285 NGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSE----MHSFLDLMVRNGVSP 340
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D I+ + A + I +AM I +K+ ++ L + C G ++ A
Sbjct: 341 DHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR-VDDAVLK 399
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
N+ + G P + +S++ L + + +K+ E+ +G + + + L +
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR 459
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G V EA +I+ M++ P V YN L+ G C G A L M +G +
Sbjct: 460 EGRVMEAQRLIDL-MLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV-SIGLKPDE 517
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ G C+ R +A + EML++ P V TYN ++ GL IG+ EA
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577
Query: 464 MISQAKLPDISVWSSLVASVCCNT 487
MI+ + DI ++ ++ +C N
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNN 601
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 191/470 (40%), Gaps = 43/470 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+YA ++ L ++ R TE + + D + + +++ + YA G L+E S +
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ FN + K++ ++ A +F + W + + + L+D LC+ R
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQW-LSPGVVNYGALIDALCKLGR 392
Query: 167 SDLALHVFQEMDFQGCYPD-----------------------------------RESYHI 191
D A+ F +M +G PD ++I
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI 452
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
LM LC + R+ EA L+ + R+ + D++ Y TL+ C G+I +A ++L+ +
Sbjct: 453 LMCNLCREGRVMEAQRLI-DLMLRVDVR---PDVISYNTLVDGHCLTGRIDEAAKLLDVM 508
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+ GLK P + L I+ A SL E L++G P + +Y+ + L+ GR
Sbjct: 509 VSIGLK-PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
E ++ M + Y L L ++ VDEA ++ + K + + N
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTI-N 626
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
I++ L G A+ +S G V + ETY ++ + L ++G E + M
Sbjct: 627 IMIGALLKGGRKEDAMDLFATIS-AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
P N L+R L G A ++L ++ + + S S L++
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 187/448 (41%), Gaps = 24/448 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ + K V M + + I Y G+ E V +
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQML 260
Query: 104 KNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ +S Q +CV + LL + K + A R+ + ++ I+ +
Sbjct: 261 QEMSTHGLQPDCVIYA----VLLDYLCKNGRCTEA-----RNIFDSLIRKGIKPHVTIYG 311
Query: 160 VLCQCRRSDLAL---HVFQE-MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L ++ AL H F + M G PD ++I+ ++EA H+ F +
Sbjct: 312 ILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHI----FDK 367
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ Q+ +V Y L+ ALC G++ DA+ +++ +G+ + C +
Sbjct: 368 MRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCT-VD 426
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A+ L E L +G + A ++ + +L EGR++E +++D M P ++ Y
Sbjct: 427 KWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYN 486
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ G +DEA ++++ MV P YN LL G C A A ++M
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDV-MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLM 545
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G TY ++ GL + GRF EA + M+ + TY +++ GLC
Sbjct: 546 K-GLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVD 604
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
EA + + S+ DI + ++ ++
Sbjct: 605 EAFKMFQSLCSKDLQLDIFTINIMIGAL 632
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP--SLVMYEAKLAALFKDGMVDEAL 351
PS +Y+ + GR+ G + G W + V++ L L VDEA
Sbjct: 90 PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTG-WSLNNTVIFGQLLKGLCDAKRVDEAT 148
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDA--GNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+++ M + V YNILLKGLC+ A+ +M++ N TY +
Sbjct: 149 DILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTV 208
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DGLC+ A V + M+ + P TY LI G S GK E V L+EM +
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL 268
Query: 470 LPDISVWSSLVASVCCN 486
PD +++ L+ +C N
Sbjct: 269 QPDCVIYAVLLDYLCKN 285
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 217/457 (47%), Gaps = 24/457 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + P Y +++ LS+++ + + + M + +R G+L EAV
Sbjct: 114 YAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ ++ C ++NTL+ + +L+ A + K + + N +++
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ R + A VF EM +G PD SY+ L+ G C L+E+ ++F ++Q+G
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES----LAVFSEMTQRG 288
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V + +L+ A C G ++ A+ ++ ++ +GL R + + DG
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL-----RMNEVTFTALIDGF---CK 340
Query: 281 KSLINEALI------RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
K +++AL+ + GI PS+ Y+A+ GR+ +++ EM K P +V
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y ++ K G +D A + + ++M+K +P Y+ L++GLC+ A + M
Sbjct: 401 YSTIISGYCKVGNLDSAFQ-LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
Q+G + TY L+DG C++G +A + +EM+ + P V TY+VLI GL +
Sbjct: 460 -LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
EA L ++ + +PD + +L+ +CC+ A+
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEF 553
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 9/305 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P +Y+ ++ L +D L A L SM + G ++ Y L+ ALC +G+
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSML----RHGVAPNVYTYNILVRALCARGR 167
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASY 299
+++A+ ++ + G + + C GE ++GA+ +++ G P+L ++
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTF 226
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
++M L GR+ KV DEM +G P +V Y L+ K G + E+L V E
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G VP V + L+ C AGN AV + +M ++ G N T+ L+DG C+ G
Sbjct: 287 RG-LVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERGLRMNEVTFTALIDGFCKKGFL 344
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+A +EEM P V YN LI G C +G+ A + EM ++ PD+ +S++
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404
Query: 480 VASVC 484
++ C
Sbjct: 405 ISGYC 409
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 192/455 (42%), Gaps = 56/455 (12%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + N + SM+ L ++ R+ ++V D+M + + T + Y + G L+E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++F ++Q V +F +L+ K LE A + + ++ + L+D
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA-VALVAQMRERGLRMNEVTFTALID 336
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ D AL +EM G P Y+ L+ G C R++ A L+ M K
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM----EAK 392
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
D+V Y T++ C G + A Q+ +K+L+KG+
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV----------------------- 429
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
+P +YS++ L E R+ + ++ + M G P Y +
Sbjct: 430 -------------LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ--- 396
K+G V++AL + +EM++ +P V Y++L+ GL + + A L K+ +
Sbjct: 477 GHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV 535
Query: 397 ---------VGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ C + E + L+ G C G EA +V + ML R++ Y++LI
Sbjct: 536 PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G C G +A+ + ++M+ P+ + SLV
Sbjct: 596 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/559 (22%), Positives = 237/559 (42%), Gaps = 84/559 (15%)
Query: 6 PRLLTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI--- 61
P ++ P +++ + SP AL++F+ A E P +R + V+ +++ IL+++N +
Sbjct: 76 PVIVDPDLFVRVLSSFRTSPRMALRLFRWA-ESQPGFRRSEFVFCAILEILAQNNLMRSA 134
Query: 62 ---------TEMKEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M ++D + G S E + I Y++ + + +S+F + +
Sbjct: 135 YWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSR 194
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++ N +L+ ++++ L + + R+ + +K I + N L+D C+ +
Sbjct: 195 LSPDVKNCNRILR-ILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-------------------THLLYS 211
L + EM +GC P+ +Y++L+ GL +A L+Y
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 212 MFWR------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
F + + KG+ + Y + ++ LC G++ DAMQ L +L L
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A L +E P++ +Y+ + L +G + ++
Sbjct: 374 VVSYNTLIYGYCRLG-NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 320 DEMRTKGFWPSLVMY-----------EAKLAALFKDGMVDEALEV--------------- 353
EM +G P +V Y +A F D M+ E LE+
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 354 --------IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++EEM+ F P + +YN+++ GLC GN A L+KM G + + T
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD-GVIPDYVT 551
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ +GR + + EML + P V TY VLI G G+ A ++ EM
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 466 SQAKLPDISVWSSLVASVC 484
+ LP++ ++SL+ +C
Sbjct: 612 EKGILPNVITYNSLINGLC 630
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 194/446 (43%), Gaps = 26/446 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I LS+ + K +I +M + + I Y G L EA+SL
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N+ + + K ++ A + S + + NLL DV+
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDA----------MQQLSDMLANNLLPDVVSY 377
Query: 164 -------CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
CR +L A +F E+ +P +Y+ L+ GLC L A L M
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI- 436
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+G DIV Y L+ C G + A + +++L +GL+ S + +
Sbjct: 437 ---NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL-DSYAYATRIVGELKL 492
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
D A SL E L +G P L Y+ + L G + E ++L +M + G P V Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + A ++G + + E+ E + KG P+V Y +L+ G G A +Y +M
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ G + N TY L++GLC+ R +A EM+ + +P +Y +LI C++G
Sbjct: 612 EK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ ++M+ + PD S+L+
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 187/415 (45%), Gaps = 19/415 (4%)
Query: 37 KYPNYRHNGPVYASM-IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ 95
K Y +N +Y G+L+E+ + E E++ +KG S + + + I + G+
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQE--EMV--LKGASPTV--ATYNSFIYGLCKLGR 354
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQS 153
+++A+ ++ N + S+NTL+ + L A +LF LRS Y + I +
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT---IVT 411
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+D LC+ ++A + EM +G PD +Y IL+ G C L+ A M
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+G D Y T + G A + E++L KG + + C
Sbjct: 472 ----HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++E A L+ + + G IP +Y+++ GR+ +G ++ EM +KG PS+V
Sbjct: 528 G-NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + G ++ A E KG +P V YN L+ GLC A + +M
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKG-ILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++ G N +Y IL++ C G + EA + ++ML R P T++ L++ L
Sbjct: 646 VEK-GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I E+ R+ + +E+ +M + I +A G+L A F +
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++N+L+ + K +++ A+ F ++ S +L++ C
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY-SYTILINENCNMGN 669
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
AL ++++M +G PD ++ L+K L D +L +A H +M
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL-QAVHGTSTM 714
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 12/369 (3%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F TLL + ++K+ A LF S I + ++ LC+ + AL + ++
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLI-TYTTIIKGLCKIGHTTNALQLLKK 201
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +GC PD +Y+ ++ LC DRR NEA + F + +G ++V Y ++L C
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF----FSEMVDQGIPPNVVTYSSILHGFC 257
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGI-P 294
+ G++ +A + ++++ + + P + I + C +G +E + + E + G+ P
Sbjct: 258 NLGQLNEATSLFKQMIGRNV-MPNTVTFTILVDGLCKEGMILEARR--VFEMMTENGVEP 314
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+YSA+ + ++ E K+ D M KGF PS+ +Y + K ++EA + +
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA-KTL 373
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EM P Y+ L++G C AG VA K+M G + + TY IL+DGLC
Sbjct: 374 LSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC-SYGLLPDSITYSILLDGLC 432
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ G EA R+L+ M P + YN+LI+G+C+ GK A + + P +
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV 492
Query: 475 VWSSLVASV 483
++ +++ +
Sbjct: 493 TYTVMISGL 501
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 37/474 (7%)
Query: 40 NYRHNGPVYASMIGILSESNR--ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
N R N +I L SNR + + +M + F T + ++
Sbjct: 99 NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+AV LF + + ++ T++K + K A + L+ K + + N +
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNA-LQLLKKMEEKGCKPDVVAYNTV 217
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-- 215
+D LC+ RR++ A++ F EM QG P+ +Y ++ G CN +LNEAT L M R
Sbjct: 218 IDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNV 277
Query: 216 -----------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+++ G D Y L+ C Q ++ +A +
Sbjct: 278 MPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQK 337
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ + ++ KG AP R + I + + AK+L++E R P +YS +
Sbjct: 338 LFDIMVGKGF-APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGF 396
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR K+ EM + G P + Y L L K G +DEA +++ M + P
Sbjct: 397 CQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA-MQESKIEPH 455
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ +YNIL++G+C+ G A + + G + TY +++ GL ++G EA +
Sbjct: 456 ICIYNILIQGMCNFGKLEAARELFSNLFVK-GIQPSVVTYTVMISGLLKEGLSNEACEMF 514
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+M++ P TYNV I+G G AV +EEM+ + D S + L+
Sbjct: 515 RKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 12/370 (3%)
Query: 135 HILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
H+ F S G K +Q + L++ LC + A+ +F E+ G P +Y
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++KGLC A LL M +KG D+V Y T++ +LC + +AM +
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKM----EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
++ +G+ I CN G+ + A SL + + R +P+ +++ + L EG
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQ-LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I+E +V + M G P Y A + +DEA ++ + + KG F P+VRVY
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG-FAPSVRVY 354
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NIL+ G C + A L +M + + TY L+ G C+ GR A ++ +EM
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDR-DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
P TY++L+ GLC G EA L+ M P I +++ L+ + CN L
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM-CNFGKL 472
Query: 491 NVCRKTLEQL 500
R+ L
Sbjct: 473 EAARELFSNL 482
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 176/402 (43%), Gaps = 20/402 (4%)
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
Y + +AV+ F L + FN LL +VK+ K + I + ++
Sbjct: 44 YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKK-KHYSTVISLCKQMDLSNIRP 102
Query: 150 RIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ +L +L++ LC R + A +M G P ++ L+ GLC+ ++ +A
Sbjct: 103 NVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVK 162
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L F I + G ++ Y T++ LC G +A+Q+L+K+ KG K + +
Sbjct: 163 L----FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C D E A +E + +G P++ +YS++ N G++ E + +M +
Sbjct: 219 DSLCKDRRANE-AMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNV 277
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGN 382
P+ V + + L K+GM+ EA V E M + P Y+ L+ G C D
Sbjct: 278 MPNTVTFTILVDGLCKEGMILEARRVFEM-MTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+M K + V Y IL++G C+ R EA +L EM R P TY+
Sbjct: 337 KLFDIMVGKGFAPSV------RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++G C G+ A +EM S LPD +S L+ +C
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 202/438 (46%), Gaps = 42/438 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + E + ++ +MK + + + T + YAR G + +A ++ + +
Sbjct: 247 TYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAM 306
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ F ++N L + + K++ A L + V + + N L+D + +R
Sbjct: 307 TAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQR 366
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S AL++ +EM +G +++I++KGLC + +L EA L M +++G D++
Sbjct: 367 SSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMM----TEEGLAPDVI 422
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ A C + A ++++++R GLK +D N
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLK--------MDTFTLN-------------- 460
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +L E R E +++L +GF P V Y +AA FK+
Sbjct: 461 --------------TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ AL + +EM K P++ YN L+KGLC G A+ L ++ K+ G V + TY
Sbjct: 507 PEPAL-YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK-GLVPDDTTY 564
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++ C++G +A + +ML + P V T N L+ GLC GK +A+ E
Sbjct: 565 NIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624
Query: 467 QAKLPDISVWSSLVASVC 484
+ K D+ +++L+ ++C
Sbjct: 625 KGKKVDVITYNTLIQALC 642
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 168/405 (41%), Gaps = 42/405 (10%)
Query: 116 QSFNTLLKEMVKE-SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
Q+ N +L + + S A + RS + + NLL+ C AL
Sbjct: 174 QAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTL 233
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M G PD +Y+ L+K C L EA LL R+ ++G Y TL+ A
Sbjct: 234 STMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLL----ARMKKEGIAPTRATYNTLVSA 289
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
G I+ A ++E + G + + + C G+ E K + P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + + R + +L+EMR KG SLV + + L ++G ++EAL +
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ M + P V YN L+ C A N A A + + +M + G + T L+ LC
Sbjct: 410 KM-MTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS-GLKMDTFTLNTLLYNLC 467
Query: 415 RDGRFLEASRVL-----------------------------------EEMLIRSYWPCVE 439
++ R+ EA +L +EM R P +
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIY 527
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN LI+GLC+IGK EA+ L E++ + +PD + ++ ++ + C
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 50/441 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + R ++ ++++M+ + ++ R GQL EA+ K +
Sbjct: 353 TYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMM 412
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ ++NTL+ K + A +L +RS +K +LN L+ LC+
Sbjct: 413 TEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG----LKMDTFTLNTLLYNLCK 468
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSG 222
+R + A + + +G PD SY +M + + A +L W +S++
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYL-----WDEMSKRKLT 523
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
I Y TL+ LC GK+ +A+ L ++++KGL + + I C +G D+E A
Sbjct: 524 PSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG-DLEKAFQ 582
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
N+ L P + + + + L G++ + K+ + KG ++ Y + AL
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK------- 395
KDG VD AL + +G P YN++L L +AG S A L K+ +
Sbjct: 643 KDGDVDTALHFFADMEARG-LQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSER 701
Query: 396 -------------------------QVGCVANG---ETYGILVDGLCRDGRFLEASRVLE 427
+ G A G E+Y V LC G+ EA VL+
Sbjct: 702 FSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLD 761
Query: 428 EMLIRSYWPCVETYNVLIRGL 448
EM+ + TY L+ GL
Sbjct: 762 EMMQKGMSVDSSTYITLMEGL 782
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 20/309 (6%)
Query: 29 KIFKEAKE--KYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
K ++EA+E + P R P Y +++ + N+ + D+M +
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ G+L EA+ L + V ++N ++ KE LE A +
Sbjct: 530 NTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLE 589
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ K + + N LM+ LC + + A+ +F+ +G D +Y+ L++ LC D ++
Sbjct: 590 NY-FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A H F + +G D Y +L AL + G+ ++A +L K+ G S R
Sbjct: 649 TALHF----FADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG---KLSER 701
Query: 264 HRIDLCPCN-----DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
L + G+D E + +GG SY+ +L G++ E V
Sbjct: 702 FSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGG--DQESYNKSVKELCVGGQLKEAKAV 759
Query: 319 LDEMRTKGF 327
LDEM KG
Sbjct: 760 LDEMMQKGM 768
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 193/440 (43%), Gaps = 16/440 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I +N + +V + M C + + T I AG+++E +SLFK +
Sbjct: 251 TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM 310
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLC 162
+ +C +++ ++ + + LF RSC + + + +++D +C
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSC-----EPNVHTYTVMVDAMC 365
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R+ D + + EM +G P +Y+ L++G C + R+ A +L M
Sbjct: 366 KERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM----ESNNCR 421
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ Y L+ + + AM +L K+L L + + C G + A
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH-FDSAYK 480
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L++ G +P +YS L R+ E + + ++ KG + VMY A +
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G +DEA+ ++E M +P YN L+ G+C G + ++ MSK +G
Sbjct: 541 KAGKIDEAISLLER-MHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK-MGVKPT 598
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY IL++ + R+G F A+RV +M+ + P V TY I C+ G EA +
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658
Query: 463 EMISQAKLPDISVWSSLVAS 482
MI +PD ++ L+++
Sbjct: 659 RMIEAGVMPDSLTYTLLISA 678
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+I A +++ G P +Y+++ + + KV + M KG + V Y
Sbjct: 229 NIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYT 288
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L + G +DE + + ++ M + PTVR Y +++ L + + +M +
Sbjct: 289 TIIHGLCEAGRIDEGISLFKK-MREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM-R 346
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ C N TY ++VD +C++ + E+ R+L EM+ + P V TYN LIRG C G+
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406
Query: 456 EAVMWLEEMISQAKLPDISVWSSLV 480
A+ L M S P+ ++ L+
Sbjct: 407 AALEILGLMESNNCRPNERTYNELI 431
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 42/236 (17%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K K A +F KEK + N +Y ++I ++ +I E ++++M + C
Sbjct: 506 KSKRMEEACDLFNSLKEK--GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
S + + I + G++ E +S+ +N+S+ ++ L++EM++E + A+
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN---- 619
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
VF +M G PD +Y + C
Sbjct: 620 --------------------------------RVFNQMVSFGHKPDVYTYTAFIHTYCTS 647
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ EA M R+ + G D + Y L+ A G DA +L+++L G
Sbjct: 648 GNVKEAE----GMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 175/369 (47%), Gaps = 8/369 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T F+ +L +VK LF + V + +LN+L++ C A VF
Sbjct: 93 TFHFDNILSSLVKNKHYLTVISLF-KQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVF 151
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ +G +PD + + L+KGLC + A + ++ +G D V Y TL+
Sbjct: 152 ANILKRGYHPDAITLNTLIKGLCFCGEIKRALYF----HDKVVAQGFQLDQVSYGTLING 207
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC G+ + ++L K+ +K I C C + + + A L +E +++G P
Sbjct: 208 LCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKN-KRVGDACDLYSEMIVKGISP 266
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ + G + E +L+EM+ K P + + + AL K+G +DEA+ +
Sbjct: 267 NVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLF 326
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EE K F P + Y L+ GLC + A+ KKM +Q G + +Y IL+D LC
Sbjct: 327 EEMKHKNMF-PNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ-GIQPDVYSYTILLDALC 384
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ GR A + + +L++ Y V TYNV+I GLC G + + +M + +PD
Sbjct: 385 KGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAI 444
Query: 475 VWSSLVASV 483
+ +++ ++
Sbjct: 445 TFKTIICAL 453
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 16/376 (4%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ----SL 154
+SLFK QF T + TL ++ AHI F S + +K +L
Sbjct: 112 VISLFK---QFQSNGVTPNLCTL--NILINCFCHLAHITFAFSVFANILKRGYHPDAITL 166
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+ LC C AL+ ++ QG D+ SY L+ GLC LL
Sbjct: 167 NTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLL----R 222
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++ D+V+Y T++ LC ++ DA + +++ KG+ + + C G
Sbjct: 223 KLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMG 282
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+++ A SL+NE ++ P + +++ + L EG+I E + +EM+ K +P++V Y
Sbjct: 283 -NLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTY 341
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + L K+ ++ A+ + ++ +G P V Y ILL LC G A + + +
Sbjct: 342 TSLIDGLCKNHHLERAIALCKKMKEQGI-QPDVYSYTILLDALCKGGRLENAKQFFQHLL 400
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G N TY ++++GLC+ G F + + +M + P T+ +I L +
Sbjct: 401 VK-GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDEN 459
Query: 455 YEAVMWLEEMISQAKL 470
+A +L EMI++ L
Sbjct: 460 DKAEKFLREMIARGLL 475
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 42/315 (13%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
+ +F++ G P+ + +IL+ C+ + A +S+F I ++G D +
Sbjct: 112 VISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFA----FSVFANILKRGYHPDAITLN 167
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ LC G+I+ A+ +K++ +G + +
Sbjct: 168 TLIKGLCFCGEIKRALYFHDKVVAQGFQLDQ----------------------------- 198
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
SY + L G ++L ++ P +VMY + L K+ V +
Sbjct: 199 -------VSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGD 251
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A ++ E +VKG P V YN L+ G C GN A L +M K + T+ IL
Sbjct: 252 ACDLYSEMIVKGI-SPNVFTYNTLIYGFCIMGNLKEAFSLLNEM-KLKNINPDVYTFNIL 309
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+D L ++G+ EA + EEM ++ +P + TY LI GLC A+ ++M Q
Sbjct: 310 IDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 369
Query: 470 LPDISVWSSLVASVC 484
PD+ ++ L+ ++C
Sbjct: 370 QPDVYSYTILLDALC 384
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DL 268
S+F + G ++ L+ C I A + IL++G + + L
Sbjct: 114 SLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGL 173
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C C + I+ A ++ + +G SY + L G ++L ++
Sbjct: 174 CFCGE---IKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVK 230
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P +VMY + L K+ V +A ++ E +VKG P V YN L
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGI-SPNVFTYNTL--------------- 274
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ G C G EA +L EM +++ P V T+N+LI L
Sbjct: 275 ---------------------IYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA---DLNVCRKTLEQ 499
GK EA+ EEM + P+I ++SL+ +C N + +C+K EQ
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + E ++++MK + F I + G+++EA+SLF+ +
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
N ++ +L+ + K LE A I + ++ + S +L+D LC+ R
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERA-IALCKKMKEQGIQPDVYSYTILLDALCKGGR 388
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A FQ + +G + + +Y++++ GLC + L M KG D +
Sbjct: 389 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM----EGKGCMPDAI 444
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGL 256
++T++ AL ++ + A + L +++ +GL
Sbjct: 445 TFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT NIL + + V+ L K + G N T IL++ C A
Sbjct: 92 PTFHFDNILSSLV--KNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFS 149
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +L R Y P T N LI+GLC G+ A+ + +++++Q D + +L+ +C
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/563 (23%), Positives = 236/563 (41%), Gaps = 93/563 (16%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L ++++I+ K + ++ F K P Y+HN + SM+ L +R+ + I
Sbjct: 73 LKAHHVAEIVAVHKDTESVIQFFYWIS-KRPFYKHNMNCFISMLNRLVR-DRVFAPADHI 130
Query: 69 DQMKGDSCECKDSV-----FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ------- 116
+ +C ++ + F I L +L L++F V +
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 117 ---------SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+FNTL+ + K+ K+ A L L + +++ + + L+ C+ R
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAE-LILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-------------- 213
DLA VF M +GC P+ +Y L+ GLCN+ R++EA +L M
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309
Query: 214 -----------------WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R+ ++G ++ Y L+ L GK++ A+ + K+L++GL
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 257 KAPKSRRHRI---DLCPCND--------------------------------GEDIEGAK 281
P + + +LC G DIE A
Sbjct: 370 -VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L + L G +P++ +Y+ + +G + ++LD M+ G P Y ++
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++ A +EMV+ P Y L+ G G +A+ LK+M +++GC
Sbjct: 489 SKWGKLESA-SFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM-EEMGCNP 546
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N E+Y +++GL ++ RF EA ++ ++M+ + P V TY LI GLC G+ A
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+M + LP++ +SSL+ +C
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLC 629
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 204/443 (46%), Gaps = 12/443 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + I EA+ L
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C Q++ L+ + + KLE A L+ + V + + + N L++ LC
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCV 385
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R AL +F M+ G + ++Y+ ++KGLC + +A L F ++ + G
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL----FEKMLKMGPLP 441
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y TL+ +G + +A ++L+ + G + P + + + +E A
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFY 500
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E + G P+ SY+A+ +G++ +L M G P++ Y A + L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E I ++MV+ +P V Y L+ GLC G + A M K+ C+ N
Sbjct: 561 ENRFSEA-EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNL 618
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ GLC++G+ EA R+ E P ++TY+ L+ GLC G+ YEA +++
Sbjct: 619 YTYSSLIYGLCQEGKADEAERMSE----IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 674
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M + PD ++ SL+ + C N
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKN 697
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 14/419 (3%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ +MK C + I +R G+L A+ L+ + + V T ++N L+ E+
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ A +F G + Q+ N ++ LC + A+ +F++M G P
Sbjct: 385 VGGRFSTALKIF-HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ G +N A LL M + G D Y L+ GK++ A
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLM----KENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 247 ILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++++ GL P S ID DG+ ++ A SL+ G P++ SY+A+
Sbjct: 500 YFQEMVECGLNPNPVSYTALID-GHSKDGK-VDIALSLLKRMEEMGCNPNVESYNAVING 557
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L E R E +K+ D+M +G P+++ Y + L ++G A ++ + M K +P
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD-MEKRKCLP 616
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ Y+ L+ GLC G + A ++MS ++GC +TY LV GLCR GRF EA ++
Sbjct: 617 NLYTYSSLIYGLCQEGKADEA----ERMS-EIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++M R + P E Y L+ C + A+ + ++ +S++ +L+ ++C
Sbjct: 672 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 730
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 12/376 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I Y G +N A L + + C ++N L+ K KLE+A F +
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF-QE 503
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ S L+D + + D+AL + + M+ GC P+ ESY+ ++ GL + R
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA + M ++G +++ Y TL+ LC G+ Q A +I + ++
Sbjct: 564 FSEAEKICDKMV----EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G+ E + ++E G P+L +YS + L +GR E ++++ +
Sbjct: 620 TYSSLIYGLCQEGKADEAER--MSEI---GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 674
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ +GF P +Y + L A K+ VD AL++ KG F + +Y L+ LC AG
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG-FQLHLSIYRALICALCKAG 733
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A M ++ A+ + +LVDGL ++G ++L M +++ P ++TY
Sbjct: 734 QVEEAQALFDNMLEK-EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Query: 442 NVLIRGLCSIGKQYEA 457
+L R L IGK E+
Sbjct: 793 VILGRELSRIGKSIES 808
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/563 (23%), Positives = 237/563 (42%), Gaps = 93/563 (16%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L ++++I+ K + ++ F ++ P Y+HN + SM+ L +R+ + I
Sbjct: 73 LKAHHVAEIVAVHKDTESVIQFFYWISKR-PFYKHNMNCFISMLNRLVR-DRVFAPADHI 130
Query: 69 DQMKGDSCECKDSV-----FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ------- 116
+ +C ++ + F I L +L L++F V +
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 117 ---------SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+FNTL+ + K+ K+ A L L + +++ + + L+ C+ R
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAE-LILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-------------- 213
DLA VF M +GC P+ +Y L+ GLCN+ R++EA +L M
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309
Query: 214 -----------------WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R+ ++G ++ Y L+ L GK++ A+ + K+L++GL
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 257 KAPKSRRHRI---DLCPCND--------------------------------GEDIEGAK 281
P + + +LC G DIE A
Sbjct: 370 -VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L + L G +P++ +Y+ + +G + ++LD M+ G P Y ++
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++ A +EMV+ P Y L+ G G +A+ LK+M +++GC
Sbjct: 489 SKWGKLESA-SFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM-EEMGCNP 546
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N E+Y +++GL ++ RF EA ++ ++M+ + P V TY LI GLC G+ A
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+M + LP++ +SSL+ +C
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLC 629
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + I EA+ L
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C Q++ L+ + + KLE A L+ + V + + + N L++ LC
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCV 385
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R AL +F M+ G + ++Y+ ++KGLC + +A L F ++ + G
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL----FEKMLKMGPLP 441
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y TL+ +G + +A ++L+ + G + P + + + +E A
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFY 500
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E + G P+ SY+A+ +G++ +L M G P++ Y A + L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E I ++MV+ +P V Y L+ GLC G + A M K+ C+ N
Sbjct: 561 ENRFSEA-EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNL 618
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ GLC++G+ EA +L+EM + P T+ LI G +G+ A + L
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678
Query: 464 MISQAKLPDISVWSSLVASV 483
M+ P+ +S L+ +
Sbjct: 679 MVDMGCKPNYRTYSVLLKGL 698
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 165/390 (42%), Gaps = 43/390 (11%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ +MK C + I +R G+L A+ L+ + + V T ++N L+ E+
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ A +F G + Q+ N ++ LC + A+ +F++M G P
Sbjct: 385 VGGRFSTALKIF-HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ G +N A LL M + G D Y L+ GK++ A
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLM----KENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 247 ILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++++ GL P S ID DG+ ++ A SL+ G P++ SY+A+
Sbjct: 500 YFQEMVECGLNPNPVSYTALID-GHSKDGK-VDIALSLLKRMEEMGCNPNVESYNAVING 557
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L E R E +K+ D+M +G P+++ Y + L ++G A ++ + M K +P
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD-MEKRKCLP 616
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ----------------------------- 396
+ Y+ L+ GLC G + A + LK+M ++
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 676
Query: 397 -----VGCVANGETYGILVDGLCRDGRFLE 421
+GC N TY +L+ GL ++ LE
Sbjct: 677 RRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 222/494 (44%), Gaps = 53/494 (10%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMI------GILSESNRITEMKEVIDQMKGDSCECKDSVF 83
F+ AK + P ++HN S++ G E+ R+ + E++ + D D +
Sbjct: 3 FFQWAKAR-PGFQHNTYTCNSLLEVFVNDGCHREAYRVFK-DELVTLFRPD-----DFTY 55
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T IR + +A Q+ +AV+L + +F +L++++ + + + A +F
Sbjct: 56 GTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIF-HQMI 114
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+VK +++ LC+ + DLA F+ M GC PD+ +Y +L+ L +
Sbjct: 115 DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWE 174
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP---- 259
+ + +F + KG ++V Y T++ C G+I A+ ++ ++ G ++P
Sbjct: 175 QG----HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG-RSPSGSL 229
Query: 260 ---------KSRRH----RIDLCPCNDGEDI----------------EGAKSLINEALIR 290
K RH + D +D+ + AK++ + +
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 289
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P SY+ + L + R+ E +++D+ + P + + + L K V+EA
Sbjct: 290 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++E + G P+V Y+ ++ GLC A A + L+KM ++ GCV + TY ++
Sbjct: 350 CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKM-RRAGCVPDVVTYTAII 408
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D C+ GR EA + + M R V YN+LIRG C K EA+ +EEM +
Sbjct: 409 DAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468
Query: 471 PDISVWSSLVASVC 484
P++ S++V +C
Sbjct: 469 PNVVSLSTIVDGLC 482
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 195/431 (45%), Gaps = 22/431 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S+I L E N + ++ QM + ++ I + +L+ A S F+ +
Sbjct: 90 FGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMV 149
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL-----MDVLC 162
Q C+ ++ L+ + K K E H +F E+ S+ S L+ ++ C
Sbjct: 150 QSGCLPDKVTYTVLVHSLFKACKWEQGHQIF------EEMLSKGHSPELVTYATVVNGYC 203
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R D AL + + + G P Y L+ GLC R +EA L + M G
Sbjct: 204 KAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL-FEM-----AAGDV 257
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+D+++Y + + LC GK+ +A + K++ G + I C D + AK
Sbjct: 258 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR-VSEAKE 316
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSLVMYEAKLAAL 341
L+++A+ R +P + + + L R+ E +L+ M G PS+V Y A + L
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K +D+A V+ ++M + VP V Y ++ C G A ++M ++ GC
Sbjct: 377 CKADRLDDAY-VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHER-GCAL 434
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y IL+ G CR + EA ++EEM R P V + + ++ GLC + EA + +
Sbjct: 435 DVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLM 494
Query: 462 EEMISQAKLPD 472
E+M ++ LPD
Sbjct: 495 EKMNFES-LPD 504
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+++ + + G N T L++ DG EA RV ++ L+ + P TY LIR
Sbjct: 1 MLFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIR 60
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
G C + +AV L EM + P I + SL+ +C +LN K L+
Sbjct: 61 GFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLC----ELNFTDKALQ 108
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 181/403 (44%), Gaps = 7/403 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + AG L EA LF L + + S N L + R
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFRE 242
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V S N+++ +LCQ + A + +M+F+G PD SY +++ G C +
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L + L+ + +KG + Y +++ LC G++ +A Q+L ++++ P +
Sbjct: 303 LGKVLKLMEEL----QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL-RVMKNQRIFPDN 357
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + ++ L +E + +P +Y++M L G++VE K+ E
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +KG P V Y A + K G + EA + +MV+ P V Y L+ GLC G
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFS-LHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+A L +MS++ G N TY L++GLC+ G +A +++EEM + ++P TY
Sbjct: 477 EVDIANELLHEMSEK-GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ C +G+ +A L M+ + P I ++ L+ C
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 218/472 (46%), Gaps = 33/472 (6%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG-------DSCE---CKDSVFATAI 87
Y ++ + V+ +L E+ + E ++ D++ DSC + S I
Sbjct: 174 YKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
RT A +F+ S+ T S+N +L + + K++ AH L ++ + V
Sbjct: 234 RT---------AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ S ++++D CQ + L + +E+ +G P++ +Y+ ++ LC R+ EA
Sbjct: 285 PD-VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+L M + D V+Y TL+ G + ++ +++ RK + +
Sbjct: 344 VLRVM----KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI 399
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKG 326
C G+ +E A+ L +E L +G P +Y+A+ ID Y G + E + ++M KG
Sbjct: 400 HGLCQAGKVVE-ARKLFSEMLSKGLKPDEVTYTAL-IDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V Y A + L K G VD A E++ E KG P V YN L+ GLC GN A
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG-LQPNVCTYNALINGLCKVGNIEQA 516
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
V +++M G + TY ++D C+ G +A +L ML + P + T+NVL+
Sbjct: 517 VKLMEEMD-LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN 575
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
G C G + ++ M+ + +P+ + ++SL+ C N R T+E
Sbjct: 576 GFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR----NNMRATIE 623
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 193/454 (42%), Gaps = 45/454 (9%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
LK+ +E + K + N Y S+I L ++ R+ E ++V+ MK + V+ T
Sbjct: 306 VLKLMEELQRK--GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + ++G ++ LF + K K+ + + +G
Sbjct: 364 ISGFGKSGNVSVEYKLFDEM--------------------KRKKIVPDFVTYTSMIHG-- 401
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
LCQ + A +F EM +G PD +Y L+ G C + EA
Sbjct: 402 --------------LCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEA- 446
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+S+ ++ +KG ++V Y L+ LC G++ A ++L ++ KGL+ + +
Sbjct: 447 ---FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G +IE A L+ E + G P +Y+ + G + + ++L M KG
Sbjct: 504 INGLCKVG-NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V + + GM+++ +I+ + KG +P +N L+K C N
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG-IMPNATTFNSLMKQYCIRNNMRAT 621
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ K M Q G V + TY IL+ G C+ EA + +EM+ + + +YN LI+
Sbjct: 622 IEIYKGMHAQ-GVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G K EA EEM + + + ++ V
Sbjct: 681 GFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + K A ++ E EK + N Y ++I L + I +
Sbjct: 460 PNVVTYTALVDGLCKCGEVDIANELLHEMSEK--GLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++++M + T + Y + G++ +A L + + +FN L+
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
LE L ++ + + N LM C + +++ M QG PD
Sbjct: 578 CMSGMLEDGERL-IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+IL+KG C R + EA L M +KG Y +L+ + K ++A
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMV----EKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 246 QILEKILRKGLKAPK 260
++ E++ G A K
Sbjct: 693 KLFEEMRTHGFIAEK 707
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 206/476 (43%), Gaps = 46/476 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
NG Y+S++ +L+ S +EM+ V++ M+ + + I+ Y+ +G + +A+ L+
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 104 KN-LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF------------------------ 138
L + + N+LL +VK ++E A L+
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212
Query: 139 --------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +G I N L+D C+ ++A +F E+ +G P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
E+Y ++ G C LL M + +G ++ +Y T++ A G I A
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEM----NSRGLTVNVQVYNTIIDARYKHGHIVKA 328
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ +E ++ G K + + C DG+ + A L+ +AL +G +P+ SY+ +
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGK-VSEADQLLEQALGKGLMPNKFSYTPLIH 387
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+G L EM +G P LV Y A + L G VD AL + E+ + +G F
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF- 446
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P +YNIL+ GLC A + L +M Q + + Y LVDG R+G EA +
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ-SVLPDAFVYATLVDGFIRNGNLDEARK 505
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ E + + P + YN +I+G C G +A+ + M + PD +S+++
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVI 561
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 192/466 (41%), Gaps = 45/466 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L + ++ E +++I+ G C + T I Y + G + A LF L
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCR 165
+ +++ ++ K+ +A L + E+ SR +Q N ++D +
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLM------EMNSRGLTVNVQVYNTIIDARYKHG 323
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF------------ 213
A+ + M GC PD +Y+ L+ G C D +++EA LL
Sbjct: 324 HIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYT 383
Query: 214 -----------------WRI--SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
W I +++G D+V Y L+ L G++ A+ I EK+L +
Sbjct: 384 PLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 443
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ P + + I + + AK L+ E L + +P Y+ + G + E
Sbjct: 444 GV-FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K+ + KG P +V Y A + K GM+ +A+ I M K P Y+ ++
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINR-MKKRHLAPDEFTYSTVI 561
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G + A ++M K + C N TY L++G CR G + ++ EM
Sbjct: 562 DGYVKQHDLDGAQKMFREMVK-MKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGL 620
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TY++LI C K +A + EEM+ +P+ ++ LV
Sbjct: 621 VPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLV 666
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 186/460 (40%), Gaps = 53/460 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVS 101
N VY ++I + I + E I+ M C CK + + T I R G+++EA
Sbjct: 308 NVQVYNTIIDARYKHGHIVKAVETIEGMI--ECGCKPDIVTYNTLISGSCRDGKVSEADQ 365
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + S+ L+ K+ + A++ L + G K + + L+
Sbjct: 366 LLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH--KPDLVTYGALVHG 423
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------- 212
L D+AL + ++M +G +PD Y+ILM GLC +L A LL M
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483
Query: 213 -----------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
F +KG IV Y ++ C G ++DAM +
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ ++ L AP + + D++GA+ + E + P++ +Y+++ +
Sbjct: 544 RMKKRHL-APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + K+ EM+ G P++V Y + + K+ + +A EE M+ VP
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE-MLMNKCVPNDVT 661
Query: 370 YNILLKGLCDAGNSAVA-----------VMYLKKMSKQV--GCVANGETYGILVDGLCRD 416
+N L+ G G A++ M+L + + G Y ++ LC+
Sbjct: 662 FNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQY 721
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G F A ++ +M + P ++ L+ G+C G+ E
Sbjct: 722 GMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 13/239 (5%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K+F+ EK N G Y +MI + + + I++MK + ++T
Sbjct: 503 ARKLFELTIEKGMNPGIVG--YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTV 560
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y + L+ A +F+ + + C ++ +L+ ++ L + +F R
Sbjct: 561 IDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIF-REMQACG 619
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND--RRLNE 204
+ + + ++L+ C+ + A F+EM C P+ +++ L+ G + R ++E
Sbjct: 620 LVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISE 679
Query: 205 ATH--------LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ + + F R+ G Y ++L LC G + A+Q+ K+ KG
Sbjct: 680 KGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKG 738
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 47/261 (18%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L ++ +LKIF+E + PN Y+ +IG + ++ +
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV----VTYSILIGSFCKEAKLID 642
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS-FNTLL 122
++M + C D F + +++ G A+S N Q N QS F
Sbjct: 643 AASFFEEMLMNKCVPNDVTFNYLVNGFSKNG--TRAISEKGNEFQEN----KQSMFLNFF 696
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
M+ + GW +S + N ++ LCQ AL + +M +GC
Sbjct: 697 GRMISD---------------GWAPRS--AAYNSILICLCQYGMFRTALQLSNKMTSKGC 739
Query: 183 YPDRESYHILMKGLC----------------NDRRLNEATHLLYSMFWRISQKGSGEDIV 226
PD S+ L+ G+C N+R L A + S+ + +G+ E V
Sbjct: 740 IPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVN-YSSILDQYLPQGTSEASV 798
Query: 227 IYRTLLFALCDQGKIQDAMQI 247
I +T+ K+ D +Q+
Sbjct: 799 ILQTMFEECQSHSKVGDNIQV 819
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 8/430 (1%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ +L+ + ++ ++ +M + + + I Y R + +A LF F
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C +F L+ +V + E A +++ + R + N+L+ + + D A
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRF-AYNVLIRYFGRSGQLDSA 119
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F+EM +G PD +Y L+ L R+ EA +M ++G +I Y
Sbjct: 120 MEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML----ERGLTPNIPTYNL 175
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ A G++ A+ + ++ R+G + P + I L + A+ L ++
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQ-PSVVTYNILLDALCSAGRVGAARKLFHKMTGD 234
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +YS + L GR+ E KV EM +G LV Y + LA L K G +D
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++++E KG F P +N ++ L A A +M + GC + +Y IL+
Sbjct: 295 WKLMKEMSRKG-FHPDAFSFNTIMDALGKANKPDAAREVFARMVES-GCKPDLISYNILI 352
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D R G +A ++LEEM+ + P +TYN LI L + G+ EA LEEM +
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCR 412
Query: 471 PDISVWSSLV 480
PD+ ++ L+
Sbjct: 413 PDVVTYNRLM 422
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 183/426 (42%), Gaps = 43/426 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I IL S + V ++ C+ + IR + R+GQL+ A+ +F+ +
Sbjct: 67 AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L+ + K +++ A F + + I + NLLMD + +
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARS-FFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D+AL +F EM +G P +Y+IL+ LC+ R+ A L F +++ G D
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL----FHKMTGDGCSPDSY 241
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ L G++++A ++ +++ +G+ A L+N
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGV-----------------------AVDLVN- 277
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
Y+++ L G + K++ EM KGF P + + AL K
Sbjct: 278 ------------YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
D A EV MV+ P + YNIL+ G++A A L++M + G + +TY
Sbjct: 326 PDAAREVF-ARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV-EAGFIPETKTY 383
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ L DG+ EA VLEEM P V TYN L+ L G+ A ++M
Sbjct: 384 NSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKD 443
Query: 467 QAKLPD 472
+ PD
Sbjct: 444 KGVEPD 449
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 167/410 (40%), Gaps = 51/410 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I S ++ E+ +MK E + + + +AG++ EA S F +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
+ ++N L+ K +L+ A LF E+K R + + N+L+D L
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFA------EMKRRGFQPSVVTYNILLDAL 215
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C R A +F +M GC PD +Y L+ GL R+ EA + +F + +G
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA----HKVFREMVDRGV 271
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-----------------PKSRRH 264
D+V Y +LL L G + ++++++ RKG P + R
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331
Query: 265 ----------RIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ DL N D A+ ++ E + G IP +Y+++ L
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+G++ E VL+EM T G P +V Y + L K G A + ++ KG P
Sbjct: 392 TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV-EPDT 450
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
Y + + GL A++ K M K VGC + Y IL+ R G
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDM-KAVGCPVDKAMYRILIRAAHRAG 499
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G++ ++ EM+ KG P Y + AL K G V EA + + +G P +
Sbjct: 114 GQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG-LTPNIPT 172
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN+L+ G +A+ +M K+ G + TY IL+D LC GR A ++ +M
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY+ L+ GL G+ EA EM+ + D+ ++SL+A++
Sbjct: 232 TGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA 286
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN+L++ +G A+ ++M K G + TYG LV+ L + GR EA +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDA 160
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
ML R P + TYN+L+ +G+ A+ EM + P + ++ L+ ++ C+
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL-CSAG 219
Query: 489 DLNVCRKTLEQLS--SCS 504
+ RK +++ CS
Sbjct: 220 RVGAARKLFHKMTGDGCS 237
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 211/448 (47%), Gaps = 32/448 (7%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + + E ++++ MK + + Y R G L EA + + ++
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC----- 162
+ N + ++N L+ + K++ A + ++ ++ +N+L DV+
Sbjct: 311 RNNLLPTVWTYNMLVNGFCNDGKIDEA----------FRIRDEMEKMNVLPDVVTYNTLI 360
Query: 163 ----QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
Q R S + +EMD +G + +Y+I++K +C + EAT L M +
Sbjct: 361 DGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM----EE 416
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D V Y TL+ A C GK+ A ++++++ KGLK + I C C + + ++
Sbjct: 417 NGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVE-KKLD 475
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL---DEMRTKGFWPSLVMYE 335
A +L+ A RG I SY + + + + + GD+ L DEM+ + PS + Y
Sbjct: 476 EAYNLLCSASKRGYILDEVSYGILILGYFKDEK---GDRALNLWDEMKERQIMPSTITYN 532
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + L + VD+A++ + E M++ VP YNI++ G C GN A + +M +
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNE-MLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIE 591
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ + T IL+ GLCR+G +A ++ ++ + V TYN +I LC GK
Sbjct: 592 NL-FKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
A L EM ++ PD + ++A++
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAAL 678
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 37/398 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ + + +TE +D+M+ + + T I Y +AG++ +A +
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW---EVKSRIQSLNLLMD 159
++ T + NT+L + E KL EA ++L S G+ EV I L D
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ D AL+++ EM + P +Y+ ++ GLC R++++A L M +
Sbjct: 507 -----EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEML----EN 557
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D Y ++ C +G ++ A Q +++ K + + C +G +E
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGM-LEK 616
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L N + +G + +Y+ + L EG+ +L EM K P Y+ +A
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676
Query: 340 ALFKDGMVDEA----LEVIEEEMV--------KGTFVPTVRV----------YNILLKGL 377
AL G + EA L+++E +V KG V T V Y+ + L
Sbjct: 677 ALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINEL 736
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
C+ A+ +++K+ G N TY L++GL +
Sbjct: 737 CNQHKYKDAMHLFVEVTKE-GVALNKYTYLNLMEGLIK 773
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFK---DGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
++ ++M+ + P+L+ + +L + + A +V+++ + G VP +NIL
Sbjct: 161 QIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGV-VPNTNSFNIL 219
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVA-------------------------------- 401
+ G C A+ ++ KMS + GCV
Sbjct: 220 IYGYCLESKVKDALDWVNKMS-EFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278
Query: 402 ---NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
N TY +LV G CR G EA++V+E M + P V TYN+L+ G C+ GK EA
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
+EM LPD+ +++L+
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLI 360
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 202/481 (41%), Gaps = 91/481 (18%)
Query: 10 TPTYLSQI-----IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
TP + +I +K + P AL +F KE+ +RH P YA+++ L+ S +
Sbjct: 36 TPKFRKRIPFVTEVKTVEDPEEALSLFHRYKEQ--GFRHYYPSYAALLYKLARSRMFDAV 93
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ MK +C++SVF + Y +AV LF + QFNC QSF
Sbjct: 94 ETILAHMKDTEMQCRESVFIALFQHYGP----EKAVELFNRMPQFNCTRTIQSF------ 143
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
N L++VL R D A +F + G P
Sbjct: 144 ------------------------------NALLNVLIDNDRFDEANDIFGKSYEMGFRP 173
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +++I++KG +A + M QK +V Y +L+ LC +G + A
Sbjct: 174 NTVTFNIMVKGRLAKGEWGKACEVFDEML----QKRVQPSVVTYNSLIGFLCRKGDLDKA 229
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
M +LE + +KG A + + AL+ G+ S+
Sbjct: 230 MALLEDMGQKGKHANE-----------------------VTYALLMEGLCSVE------- 259
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ E K++ +M +G V + + L K G V+EA ++ E M K
Sbjct: 260 ------KTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHE-MKKRRLK 312
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEAS 423
P V YNIL+ LC G + A L +M Q+G CV N TY ++VDGLC+ G F A
Sbjct: 313 PDVVTYNILINYLCKEGKAMEAYKVLLEM--QIGGCVPNAATYRMVVDGLCQIGDFEVAL 370
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VL ML + P ET+N ++ GL G + LEEM + D+ W +++ S
Sbjct: 371 SVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSA 430
Query: 484 C 484
C
Sbjct: 431 C 431
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 220/497 (44%), Gaps = 39/497 (7%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+TP+++S + P TAL+ F + PN++HN YAS++ ++ ++++ ++I
Sbjct: 66 ITPSHVSSLFSLNLDPHTALQ-FSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKII 124
Query: 69 DQM------------KGDSCE--CKDSVFATAIRTY-------ARAGQLNEAVSLFKNLS 107
M D C KD + +++ Y AR G ++E L+ +
Sbjct: 125 VSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEML 184
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +FN ++ K ++ A + S + ++ C+ +
Sbjct: 185 EEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGY-CRSKDV 243
Query: 168 DLALHVFQEMDFQGCYPDRE--SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D A VF+EM P+R SY+ L+ GLC R++EA S+F R+ ++
Sbjct: 244 DSAFRVFEEM------PNRNEVSYNQLIHGLCEAGRIDEAV----SLFVRMKDDCCYPNV 293
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ LC + + AM +L+++L + L + + C G ++ A L++
Sbjct: 294 YTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGH-LDSAYRLLS 351
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
RG +P +Y L R+ E ++ D + +G +++MY + K G
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VDEA + E+M+ P +N L+ GLC AGN A+ +M K +G T
Sbjct: 412 KVDEA-GCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK-MGLKPTVYT 469
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ IL+ + + G F +A + L++M+ P TYN I CS GK EA + +M
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529
Query: 466 SQAKLPDISVWSSLVAS 482
+ PD ++SL+ +
Sbjct: 530 EEGVPPDDFTYTSLIKA 546
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 215/509 (42%), Gaps = 48/509 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P T T + K +A ++F+E PN N Y +I L E+ RI E
Sbjct: 225 PDYFTSTSFILGYCRSKDVDSAFRVFEEM----PN--RNEVSYNQLIHGLCEAGRIDEAV 278
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +MK D C + I+ R +++A+ L + + N V ++N+L+
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQ 337
Query: 126 VKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ L++A+ +L L G R + +D LC+ R + A +F + +G
Sbjct: 338 CRAGHLDSAYRLLSLMKERGLVPDQR--TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA 395
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ Y +L+ G C +++EA +F ++ K + + L+ LC G +++A
Sbjct: 396 NVIMYSVLIDGYCKVGKVDEAG----CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ + +++++ GLK P I + D + A + + + G P +Y+A I
Sbjct: 452 LSLFDQMVKMGLK-PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF-I 509
Query: 305 DLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
++Y + G++ E + ++ +M+ +G P Y + + A K G+ A +V++ M
Sbjct: 510 EVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS-MFDADC 568
Query: 364 VPTVRVYNILLKGLCD-------AGNSAV----------------------AVMYLKKMS 394
P+ + L+K L D +G + V + ++M
Sbjct: 569 EPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEME 628
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K GC + + Y L+ G+C+ A ++L++M P +N +I C + K
Sbjct: 629 KH-GCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASV 483
EA +E+MI P + +L+ +
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGL 716
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 168/409 (41%), Gaps = 53/409 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y I L +SNR+ E + + D + + +++ I Y + G+++EA LF+ +
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC +FN L+ + L+ A LF +K + + N+L+ + +
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLF-DQMVKMGLKPTVYTFNILIGRMLKQGD 482
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A Q+M G P +Y+ ++ C+ ++ EA ++ M ++G D
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQM----KEEGVPPDDF 538
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ A G A +L+ + D E
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFDA---------------------DCE-------- 569
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVE--GDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
PS ++ ++ L+++ +VE G+ ++ + G P + ++K
Sbjct: 570 -------PSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPG--------SNMWKM 614
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D +E+ EEM K P + Y L+ G+C N +A+ L +M K+ G +
Sbjct: 615 MEFDIVIELF-EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKE-GISPSEM 672
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ ++ C+ ++ EA+ ++E+M+ + P +E LI GL G+
Sbjct: 673 VFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 205/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N +S++ S RI+E ++DQM + F T I + +EAV
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV 206
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + C ++ ++ + K + A IL + G +++ + ++D
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQG-KLEPGVLIYTTIIDG 265
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + D AL++F+EM+ +G P+ +Y L+ LCN R ++A+ LL M ++
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI----ERK 321
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ + L+ A +GK+ +A ++ ++++++ + + C + ++ A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH-DRLDEA 380
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K + + + P + SYS + R+ EG ++ EM +G + V Y +
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQV 397
LF+ G D A E+ +E MV P + YN LL GLC G + V YL++ SK
Sbjct: 441 LFQAGDCDMAQEIFKE-MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 498
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY I+++G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 499 PTIY---TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+EM LP+ +++L+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLI 578
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 210/443 (47%), Gaps = 10/443 (2%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y+ +I +++ V+ +M E ++ + Y + +++EAV+L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ T +FNTL+ + +K A L R + + + ++++ LC
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-AKGCQPDLVTYGVVVNGLC 232
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +DLA + +M+ P Y ++ GLC ++ +++A +L F + KG
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL----FKEMETKGIR 288
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V Y +L+ LC+ G+ DA ++L ++ + + + +G+ +E A+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE-AEK 347
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E + R PS+ +YS++ R+ E ++ + M +K +P +V Y +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K VDE +E+ E +G TV Y L++GL AG+ +A K+M G N
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPN 465
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 466 IMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+ + PD+ ++++++ C
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFC 547
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 200/437 (45%), Gaps = 8/437 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL A+++ +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + ++LL ++ A + + + + + N L+ L ++
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEA-VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + M +GC PD +Y +++ GLC T L + + ++ Q ++I
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCK----RGDTDLAFILLNKMEQGKLEPGVLI 258
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC + DA+ + +++ KG++ + C CN G A L+++
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDM 317
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P + ++SA+ EG++VE +K+ DEM + PS+V Y + + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA ++ E + K F P V Y+ L+KG C A + ++MS Q G V N TY
Sbjct: 378 DEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVTYT 435
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ GL + G A + +EM+ P + TYN L+ GLC GK +A++ E +
Sbjct: 436 TLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 468 AKLPDISVWSSLVASVC 484
P I ++ ++ +C
Sbjct: 496 KMEPTIYTYNIMIEGMC 512
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 172/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV+LF + + F+ LL + K +K + I + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGMPHNHYTY 119
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
++L++ C CRRS L AL V +M G P+ + L+ G C+ +R++EA L+ M
Sbjct: 120 SILIN--CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F G + V + TL+ L K +A+ ++++++ K
Sbjct: 178 FV----TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK------------------ 215
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G P L +Y + L G +L++M P ++
Sbjct: 216 ------------------GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVL 257
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + L K+ +D+AL + +E KG P V Y+ L+ LC+ G + A L
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 317 MIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E M+S+ PD+ +S+L+ C
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 199/438 (45%), Gaps = 48/438 (10%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++ T ++Q++K+ + A IFK AK++ P YRH+ Y SM+ IL ++ M E+
Sbjct: 194 VSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIP-YRHSPESYNSMVDILGKAKNFRLMWEL 252
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+D+M + + IR ARAG+ EA+ F+N+ ++ T + N L+ +VK
Sbjct: 253 VDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVK 312
Query: 128 ESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
E+ +E AH +F C + + S N+L+ C+ ++ D A + E++ G PD
Sbjct: 313 EASVEDAHNVFRELKC---SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDV 369
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY ++ C ++ +L M KG +++ + ++ AL +I +A++
Sbjct: 370 ISYTAFIEAHCREKDFRNVDKVLVQM----EHKGCKPNVITFTIIMHALGKAKQINEALK 425
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ EK+ ++G +P + YS++ L
Sbjct: 426 VYEKMKKEGC------------------------------------VPDSSFYSSLIFIL 449
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + +++++M +G P ++ Y ++ + AL ++ +M + + P
Sbjct: 450 GKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLL-LKMEEVSCKPD 508
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
++ Y+ LLK C V L M K + G TY ILV GLC +G+ A
Sbjct: 509 LKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAG-TYAILVRGLCENGKLHLACSFF 567
Query: 427 EEMLIRSYWPCVETYNVL 444
EML ++ P T+ +L
Sbjct: 568 GEMLSKAMVPKDSTFKML 585
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 51/337 (15%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S N ++D+L + + L + EM+ E+ +++ L R EA H
Sbjct: 231 ESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIH---- 286
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F I + G D L+ AL + ++DA + ++
Sbjct: 287 AFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-------------------- 326
Query: 272 NDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ IP +LAS++ + ++ E K++ E+ G P
Sbjct: 327 ------------------KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPD 368
Query: 331 LVMYEAKLAALFKDG---MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
++ Y A + A ++ VD+ L +E + K P V + I++ L A A+
Sbjct: 369 VISYTAFIEAHCREKDFRNVDKVLVQMEHKGCK----PNVITFTIIMHALGKAKQINEAL 424
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+KM K+ GCV + Y L+ L + GR + ++E+M + P V TYN LI
Sbjct: 425 KVYEKMKKE-GCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 483
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C+ ++ A+ L +M + PD+ + L+ C
Sbjct: 484 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFC 520
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 221/479 (46%), Gaps = 20/479 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + K +++F+E ++ + + Y ++I L ++ + E +
Sbjct: 79 PTIVTYNTIINGLCKSNELGAGMELFEELVKR--GHHPDVVTYNTLIDSLCKAGDLEEAR 136
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC--VNWTQSFNTLLK 123
+ M C ++ I + G+++EA L + +++ +C + ++N+ L
Sbjct: 137 RLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 196
Query: 124 EMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K+S EA ++ V + + L+D LC+C ++D A + +M G
Sbjct: 197 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGY 254
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y+ L+ GLC ++ A ++ SM KG D++ Y L+ A C ++
Sbjct: 255 VPNVVTYNALVNGLCKADKMERAHAMIESMV----DKGVTPDVITYSVLVDAFCKASRVD 310
Query: 243 DAMQILEKILRKGLKAPKSRRHRI--DLCPCN-DGEDIEGAKSLINEALIRGGIPSLASY 299
+A+++L + +G + I LC + GE + A + N L+ P ++
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV----PDKVTF 366
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + G + + +EM K P ++ + A + L K G V+ A ++++ M
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDL-MG 425
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
P V YN+L+ GLC +G +L++M GCV TYG LV LCR R
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS-GCVPESMTYGSLVYALCRASRT 484
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A +++ ++ + P TYN+L+ GL GK +A+ LEEM+ + PD +++
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 206/448 (45%), Gaps = 62/448 (13%)
Query: 83 FATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +++ RAG+ A+ +F+ +++ ++NT++ + K ++L A LF
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF--- 104
Query: 142 CYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
E+ R + + N L+D LC+ + A + M +GC P+ +Y +L+ GL
Sbjct: 105 ---EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C R++EA L+ M + +I+ Y + L LC Q +A +++ + L
Sbjct: 162 CKVGRIDEARELIQEMTRKSCD--VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219
Query: 257 K-APKSRRHR--ID-LCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAIDLYNEGR 311
+ +P + ID LC C ++ N+ +I GG +P++ +Y+A+ L +
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEA------CNDDMIAGGYVPNVVTYNALVNGLCKADK 273
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ +++ M KG P ++ Y + A K VDEALE++ +G P V +N
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC-TPNVVTFN 332
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++ GLC + S A ++ ++ V + T+ IL+ G C+ G F +AS + EEM+
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRM-LVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391
Query: 432 RSYWP------------C-----------------------VETYNVLIRGLCSIGKQYE 456
++ P C V TYNVL+ GLC G+ E
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
+LEEM+S +P+ + SLV ++C
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALC 479
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 204/439 (46%), Gaps = 16/439 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
Y+ +I L + RI E +E+I +M SC+ ++ + + + + EA L +
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212
Query: 105 NL--SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+L T +F+TL+ + K + EA + + Y + + N L++ L
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGY----VPNVVTYNALVNGL 268
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + + A + + M +G PD +Y +L+ C R++EA LL+ M + +G
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM----ASRGC 324
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V + +++ LC + +A QI ++ + L K + + C G + E A
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAG-NFEQAS 383
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L E + + P + ++ A+ L G++ +LD M G P++V Y + L
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++E E +EE MV VP Y L+ LC A + A+ + K+ K G
Sbjct: 444 CKSGRIEEPCEFLEE-MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL-KSFGWDP 501
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY ILVDGL + G+ +A VLEEM+ + + P T+ GL G + L
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELL 561
Query: 462 EEMISQAKLPDISVWSSLV 480
++++ LPD + SS++
Sbjct: 562 RVVLAKGMLPDATTCSSIL 580
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
S+ Y L +L + G ALE+ EM + PT+ YN ++ GLC + +
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+++ K+ G + TY L+D LC+ G EA R+ M R P V TY+VLI GLC
Sbjct: 104 FEELVKR-GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLC 162
Query: 450 SIGKQYEAVMWLEEMISQA--KLPDISVWSSLVASVC 484
+G+ EA ++EM ++ LP+I ++S + +C
Sbjct: 163 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC 199
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 194/401 (48%), Gaps = 12/401 (2%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F +R AG+ A+ L + + + N V ++NT++ +++AA +
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMRE 210
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ + ++ C+ R D A+ VF EM +G P+ Y+ L+ G C+
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+ T LLY R+ ++G + Y L+ AL G+ +A +++E++ KGL
Sbjct: 271 GKLD--TALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALD 326
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C +G +++ A + RG ++ +Y+++ L +G++ E DK+
Sbjct: 327 VFTYNILINGHCKEG-NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
DE +G P LV+Y A + + G +D A E++ E M K P YN L++GLC
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE-MEKKRIAPDDVTYNTLMRGLCL 444
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G A + +M+K+ G + TY L+ G G +A R+ EM+ + + P +
Sbjct: 445 LGRVDEARKLIDEMTKR-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 503
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN LI+GLC G+ +A ++EM+ PD S + SL+
Sbjct: 504 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 192/422 (45%), Gaps = 30/422 (7%)
Query: 84 ATAIRTYARAGQLN------------------EAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
AT++R Y+R L+ A +LF ++ + T +FN +L+ +
Sbjct: 105 ATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHL 164
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYP 184
K A + LR + + N ++ C R AL + +EM + G P
Sbjct: 165 CSAGK-PARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
++ +Y ++ G C R++EA + M + K + V+Y L+ CDQGK+ A
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTA 276
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++++ +G+ + + + DG E A L+ E +G + +Y+ +
Sbjct: 277 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLALDVFTYNILIN 335
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG + + ++ + M +G ++V Y + + AL K G V E ++ +E + +G
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG-IR 394
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +YN L+ +GN A + +M K+ + TY L+ GLC GR EA +
Sbjct: 395 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARK 453
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++EM R P + TYN LI G G +A+ EM+++ P + +++L+ +C
Sbjct: 454 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 513
Query: 485 CN 486
N
Sbjct: 514 KN 515
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 8/370 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLR 140
+ T I + G++ A+ + + + + + Q ++ T++ K +++ A +F
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
EVK N L+ C + D AL M +G +Y++L+ L D
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 306
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R EA Y + + KG D+ Y L+ C +G ++ A++I E + R+G++A
Sbjct: 307 RGTEA----YELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ G+ ++ L +EA+ RG P L Y+A+ G I +++
Sbjct: 363 VTYTSLIYALSKKGQ-VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 421
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P V Y + L G VDEA ++I+E M K P + YN L+ G
Sbjct: 422 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE-MTKRGIQPDLVTYNTLISGYSMK 480
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G+ A+ +M + G TY L+ GLC++G+ +A +++EM+ P T
Sbjct: 481 GDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 539
Query: 441 YNVLIRGLCS 450
Y LI GL +
Sbjct: 540 YISLIEGLTT 549
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 1 MSVRWPRLLTPTYLSQI--IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
MS R R TY S I + K+ K+F EA + R + +Y ++I S S
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR--GIRPDLVLYNALINSHSTS 410
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
I E++ +M+ D + T +R G+++EA L +++ ++
Sbjct: 411 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 470
Query: 119 NTLLKEMVKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
NTL+ + ++ A L +R+ + + N L+ LC+ + D A ++ +EM
Sbjct: 471 NTLISGYSMKGDVKDA--LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528
Query: 178 DFQGCYPDRESYHILMKGLCND 199
G PD +Y L++GL +
Sbjct: 529 VENGITPDDSTYISLIEGLTTE 550
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 210/446 (47%), Gaps = 29/446 (6%)
Query: 33 EAKEKYPNYRHNGPVYA--SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
EA ++ +YR+ V + ++ L + N ++ V +M F T I
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK---EMVKESKLEAAHILFLRSCYGWEV 147
+ G+LN+A + ++ + ++NTL+ +M + K+ A + L+ +V
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAI-LKEMVENKV 299
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ N+L+D C+ AL VF+EM QG P +Y+ L+ GLCN+ +LNEA
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL M +++ Y L+ C + +++A ++ + I ++GL + +
Sbjct: 360 LLDEML----SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G+ +E A L L +G +P+ ++Y+ + + EG++ E +L+EM+ +G
Sbjct: 416 HGYCKFGK-MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGV 474
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
V Y ++A + +A +I+E + KG P+ YNILL G C GN A+
Sbjct: 475 KADTVTYNILISAWCEKKEPKKAARLIDEMLDKG-LKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
K+M K+ G AN TY +L+ G CR G+ +A+ +L EML + P TY ++
Sbjct: 534 NLRKQMEKE-GRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII--- 589
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDI 473
EEM+ + LPDI
Sbjct: 590 -------------KEEMMEKGFLPDI 602
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 198/421 (47%), Gaps = 30/421 (7%)
Query: 94 GQLNEAVSL-FKNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
G+ N ++SL F +LS QF C N + + L+ V+ SK F R+ + K
Sbjct: 136 GETNCSISLIFHSLSVCSGQF-CANSIIA-DMLVLAYVENSKTVLGLEAFKRAG-DYRYK 192
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ S N L+ L + V++EM + P+ +++ ++ GLC +LN+A +
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252
Query: 209 LYSM----FWRISQKGSGEDIVIYRTLLFALCDQG---KIQDAMQILEKILRKGLKAPKS 261
+ M FW ++V Y TL+ C G K+ A IL++++ + +P S
Sbjct: 253 VDDMKVWGFW--------PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV-SPNS 303
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + E++ A + E +G P++ +Y+++ L NEG++ E +LDE
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + P+++ Y A + K +++EA E+ + + K P V +N LL G C G
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDN-IGKQGLTPNVITFNTLLHGYCKFG 422
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + L+K+ + G + N TY L+ G CR+G+ E +L EM R TY
Sbjct: 423 KMEEAFL-LQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTY 481
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT---ADLNVCRKTLE 498
N+LI C + +A ++EM+ + P ++ L+ C A LN+ RK +E
Sbjct: 482 NILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL-RKQME 540
Query: 499 Q 499
+
Sbjct: 541 K 541
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 214/480 (44%), Gaps = 45/480 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ ++P LS +++ Q P AL++F+ +R+ Y +I L S EM+
Sbjct: 4 PKPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 66 EVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ Q++ ++ K+ +F I Y RA + A+ F+++ +F C +S N+LL
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++K + E + S + + N+L++ C A +VF EM + P
Sbjct: 124 LLKCKEFEKFDGIL--SGIDKFATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCP 181
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ ++ L+ GLC D RL+EA L M + K + +Y +L+ LC ++ A
Sbjct: 182 NVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNA---FVYASLMKGLCRVNELSLA 238
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ L+K + A K R + GI YS +
Sbjct: 239 FE-----LKKEMVANKLR--------------------------LDSGI-----YSTLIA 262
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L+ GR E VL+EMR G P V Y A ++ + + A V+EE + KG
Sbjct: 263 ALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGC-K 321
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V YN+++ GLC G A + M ++ GC + +Y IL DGLC +F EA+
Sbjct: 322 PDVISYNVIISGLCKEGKWREANDLFEDMPRR-GCTPDVGSYRILFDGLCEGMQFNEAAF 380
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+EM+ + Y P + + LC G E + + + + + D WS V+ VC
Sbjct: 381 ILDEMVFKGYAPKSASKTKFVEALCQEG-NLELLCKVLNSLVKGNVIDGDAWSLAVSKVC 439
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 23/411 (5%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R G+L EAV + ++ C ++NTL+ + +L+ A +
Sbjct: 17 VRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGN 76
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
K + + N +++ LC+ R + A VF EM +G PD SY+ L+ G C L+E+
Sbjct: 77 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES- 135
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++F ++Q+G D+V + +L+ A C G ++ A+ ++ ++ +GL R + +
Sbjct: 136 ---LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL-----RMNEV 187
Query: 267 DLCPCNDGEDIEGAKSLINEALI------RGGI-PSLASYSAMAIDLYNEGRIVEGDKVL 319
DG K +++AL+ + GI PS+ Y+A+ GR+ +++
Sbjct: 188 TFTALIDGF---CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM K P +V Y ++ K G +D A + + ++M+K +P Y+ L++GLC+
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ-LNQKMLKKGVLPDAITYSSLIRGLCE 303
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + M Q+G + TY L+DG C++G +A + +EM+ + P V
Sbjct: 304 EKRLNDACELFENM-LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 362
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
TY+VLI GL + EA L ++ + +PD + +L+ +CC+ A+
Sbjct: 363 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--LCCSKAEF 411
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 161/366 (43%), Gaps = 35/366 (9%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N+L+ LC R + A+ V +M GC P+ +Y+ L+ C L+ A
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 207 HLLYSM--------------------------------FWRISQKGSGEDIVIYRTLLFA 234
++ M F + ++G D+V Y TLL
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C G + +++ + ++ ++GL + C G ++E A +L+ + RG
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG-NLEQAVALVAQMRERGLRM 184
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +++A+ +G + + ++EMR G PS+V Y A + K G +D A E+I
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EM P V Y+ ++ G C GN A +KM K+ G + + TY L+ GLC
Sbjct: 245 -REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLC 302
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R +A + E ML P TY LI G C G +A+ +EMI + LPD+
Sbjct: 303 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 362
Query: 475 VWSSLV 480
+S L+
Sbjct: 363 TYSVLI 368
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 41/305 (13%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G P+ +Y+IL++ LC RL EA ++ M G + V Y TL+ A C G
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDM----RGAGCAPNAVTYNTLVAAFCRAG 59
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A +++ + +G AK P+L ++
Sbjct: 60 ELDGAERVVSLMREEG-----------------------NAK------------PNLVTF 84
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
++M L GR+ KV DEM +G P +V Y L+ K G + E+L V E
Sbjct: 85 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G VP V + L+ C AGN AV + +M ++ G N T+ L+DG C+ G
Sbjct: 145 RG-LVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RERGLRMNEVTFTALIDGFCKKGFL 202
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+A +EEM P V YN LI G C +G+ A + EM ++ PD+ +S++
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262
Query: 480 VASVC 484
++ C
Sbjct: 263 ISGYC 267
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 192/455 (42%), Gaps = 56/455 (12%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + N + SM+ L ++ R+ ++V D+M + + T + Y + G L+E+
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++F ++Q V +F +L+ K LE A + + ++ + L+D
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA-VALVAQMRERGLRMNEVTFTALID 194
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ D AL +EM G P Y+ L+ G C R++ A L+ M K
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM----EAK 250
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
D+V Y T++ C G + A Q+ +K+L+KG+
Sbjct: 251 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV----------------------- 287
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
+P +YS++ L E R+ + ++ + M G P Y +
Sbjct: 288 -------------LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ--- 396
K+G V++AL + +EM++ +P V Y++L+ GL + + A L K+ +
Sbjct: 335 GHCKEGNVEKALS-LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV 393
Query: 397 ---------VGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ C + E + L+ G C G EA +V + ML R++ Y++LI
Sbjct: 394 PDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 453
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G C G +A+ + ++M+ P+ + SLV
Sbjct: 454 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 488
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 37/163 (22%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL-------- 409
MV+ P V YNIL++ LC G AV + M + GC N TY L
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAG 59
Query: 410 ----------------------------VDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
V+GLC+ GR A +V +EM+ P V +Y
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N L+ G C +G +E++ EM + +PD+ ++SL+ + C
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 162
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 182/386 (47%), Gaps = 8/386 (2%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+AV+ F + T FN +L +VK + LF + + + +L++L
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLF-KQFEPNGITPDLCTLSIL 102
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ C A VF + +G +P+ + + L+KGLC + A H ++
Sbjct: 103 INCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHF----HDKVV 158
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+G D V Y TL+ LC G+ + ++L K+ +K I C C + + +
Sbjct: 159 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKN-KLL 217
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A L +E +++G P++ +Y+ + G + E +L+EM+ K P + +
Sbjct: 218 GDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNIL 277
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ AL K+G +DEA+ + EE K F P + Y L+ GLC + A+ KKM +Q
Sbjct: 278 IDALAKEGKIDEAMSLFEEMKHKNMF-PNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ- 335
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G N +Y IL+D LC+ GR A + + +L++ Y V TYNV+I GLC G +
Sbjct: 336 GIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV 395
Query: 458 VMWLEEMISQAKLPDISVWSSLVASV 483
+ +M + +P+ + +++ ++
Sbjct: 396 MDLKSKMEGKGCMPNAITFKTIICAL 421
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 16/393 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F + + + + +SLFK QF T TL ++ HI F S
Sbjct: 63 LFNNILSSLVKNKRYPTVISLFK---QFEPNGITPDLCTL--SILINCFCHLTHITFAFS 117
Query: 142 CYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ +K +LN L+ LC C ALH ++ QG D+ SY L+ GLC
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
LL ++ D+V+Y T++ LC + DA + +++ KG+
Sbjct: 178 KAGETKAVARLL----RKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGIS 233
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ C G +++ A SL+NE ++ P + +++ + L EG+I E
Sbjct: 234 PNVFTYTTLIHGFCIMG-NLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMS 292
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ +EM+ K +P++V Y + + L K+ ++ A+ + ++ +G P V Y ILL L
Sbjct: 293 LFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG-IQPNVYSYTILLDAL 351
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A + + + + G N TY ++++GLC+ G F + + +M + P
Sbjct: 352 CKGGRLENAKQFFQHLLVK-GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPN 410
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
T+ +I L + +A +L EMI++ L
Sbjct: 411 AITFKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 143/331 (43%), Gaps = 42/331 (12%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N ++ L + +R + +F++ + G PD + IL+ C+ + A +S+F
Sbjct: 64 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFA----FSVF 119
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
I ++G + + TL+ LC G+I+ A+ +K++ +G + +
Sbjct: 120 ANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQ------------- 166
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
SY + L G ++L ++ P LVM
Sbjct: 167 -----------------------VSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVM 203
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + L K+ ++ +A ++ E +VKG P V Y L+ G C GN A L +M
Sbjct: 204 YTTIIHCLCKNKLLGDACDLYSEMIVKG-ISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM 262
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K + T+ IL+D L ++G+ EA + EEM ++ +P + TY LI GLC
Sbjct: 263 -KLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHH 321
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ ++M Q P++ ++ L+ ++C
Sbjct: 322 LERAIALCKKMKEQGIQPNVYSYTILLDALC 352
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + E ++++MK + F I A+ G+++EA+SLF+ +
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
N ++ +L+ + K LE A I + ++ + S +L+D LC+ R
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERA-IALCKKMKEQGIQPNVYSYTILLDALCKGGR 356
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A FQ + +G + + +Y++++ GLC + L M KG + +
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM----EGKGCMPNAI 412
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGL 256
++T++ AL ++ + A + L +++ +GL
Sbjct: 413 TFKTIICALLEKDENDKAEKFLREMIARGL 442
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 199/438 (45%), Gaps = 48/438 (10%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++ T ++Q++K+ + A IFK AK++ P YRH+ Y SM+ IL ++ M E+
Sbjct: 171 VSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIP-YRHSPESYNSMVDILGKAKNFRLMWEL 229
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+D+M + + IR ARAG+ EA+ F+N+ ++ T + N L+ +VK
Sbjct: 230 VDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVK 289
Query: 128 ESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
E+ +E AH +F C + + S N+L+ C+ ++ D A + E++ G PD
Sbjct: 290 EASVEDAHNVFRELKC---SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDV 346
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY ++ C ++ +L M KG +++ + ++ AL +I +A++
Sbjct: 347 ISYTAFIEAHCREKDFRNVDKVLVQM----EHKGCKPNVITFTIIMHALGKAKQINEALK 402
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ EK+ ++G +P + YS++ L
Sbjct: 403 VYEKMKKEGC------------------------------------VPDSSFYSSLIFIL 426
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + +++++M +G P ++ Y ++ + AL ++ +M + + P
Sbjct: 427 GKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLL-LKMEEVSCKPD 485
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
++ Y+ LLK C V L M K + G TY ILV GLC +G+ A
Sbjct: 486 LKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAG-TYAILVRGLCENGKLHLACSFF 544
Query: 427 EEMLIRSYWPCVETYNVL 444
EML ++ P T+ +L
Sbjct: 545 GEMLSKAMVPKDSTFKML 562
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 51/337 (15%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S N ++D+L + + L + EM+ E+ +++ L R EA H
Sbjct: 208 ESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIH---- 263
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F I + G D L+ AL + ++DA + ++
Sbjct: 264 AFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-------------------- 303
Query: 272 NDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ IP +LAS++ + ++ E K++ E+ G P
Sbjct: 304 ------------------KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPD 345
Query: 331 LVMYEAKLAALFKDG---MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
++ Y A + A ++ VD+ L +E + K P V + I++ L A A+
Sbjct: 346 VISYTAFIEAHCREKDFRNVDKVLVQMEHKGCK----PNVITFTIIMHALGKAKQINEAL 401
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+KM K+ GCV + Y L+ L + GR + ++E+M + P V TYN LI
Sbjct: 402 KVYEKMKKE-GCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 460
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C+ ++ A+ L +M + PD+ + L+ C
Sbjct: 461 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFC 497
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 45/404 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ + Y + ++++AV+L + + T +FNTL+ H LFL +
Sbjct: 152 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLI------------HGLFLHN 199
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ A+ + +M +GC PD +Y ++ GLC
Sbjct: 200 ------------------------KASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235
Query: 202 LNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ A LL M +KG E D+VIY T++ LC I DA + K+ KG++
Sbjct: 236 IDLALSLLKKM-----EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C CN G A L++ + R P++ ++SA+ EG++VE +K+ D
Sbjct: 291 FTYNSLISCLCNYGR-WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM + P + Y + + +DEA + E + K F P V YN L+KG C A
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKA 408
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ ++MS Q G V N TY L+ GL + G A ++ ++M+ P + T
Sbjct: 409 KRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y++L+ GLC GK +A++ E + PDI ++ ++ +C
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 204/435 (46%), Gaps = 14/435 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ S RI++ ++DQM + F T I + +EAV+L + Q
Sbjct: 154 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ 213
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A + L+ ++++ + N ++D LC+ + D
Sbjct: 214 RGCQPDLVTYGAVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHID 272
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F +M+ +G PD +Y+ L+ LCN R ++A+ LL +M R ++V +
Sbjct: 273 DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER----KINPNVVTF 328
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 387
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + R+ EG ++ EM +G + V Y + LF+ G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A ++ ++ MV P + Y+ILL GLC G + V YL+K + + T
Sbjct: 448 MAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PDIYT 502
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V Y +I G C G + EA EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 466 SQAKLPDISVWSSLV 480
LPD +++L+
Sbjct: 563 EDGTLPDSGCYNTLI 577
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 172/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++A+ LF + Q + FN LL + K K + L R + + S
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGER-MQNLRISYDLYSY 118
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS L AL V +M G PD + L+ G C+ +R+++A L+ M
Sbjct: 119 NILIN--CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D V + TL+ L K +A+ ++++++++G +
Sbjct: 177 V----EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQ--------------- 217
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
P L +Y A+ L G I +L +M +V
Sbjct: 218 ---------------------PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + L K +D+A + + KG P V YN L+ LC+ G + A L
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKG-IRPDVFTYNSLISCLCNYGRWSDASRLLSN 315
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 316 MIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +++L+ C
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 183/434 (42%), Gaps = 43/434 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I S R+ V +M + F T I + G+ +AV F +
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++ T++ + K + AA LF + + + + N+L+D LC+ + + A
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLF-KKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L +F M + PD +Y+ L++GLCN RR EA+ LL M + +I +
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM----TSLNIMPNIFTFNV 310
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ A+C +GK+ +A + + + G++
Sbjct: 311 LVDAICKEGKVSEAQGVFKTMTEMGVE--------------------------------- 337
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P + +YS++ IVE K+ D M TKG P Y + K +DEA
Sbjct: 338 ---PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ E M+ P YN L+ GLC G A K M G + + TY +L+
Sbjct: 395 KQLFNE-MIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN-GNLPDLFTYSMLL 452
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DG C++G +A R+ M P + YN+LI +C G +A E+ Q L
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL 512
Query: 471 PDISVWSSLVASVC 484
P++ ++++++ ++C
Sbjct: 513 PNVQIYTTIINNLC 526
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 188/419 (44%), Gaps = 10/419 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + + E D + C+ + T I + G+ A LFK +
Sbjct: 167 TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKM 226
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++N L+ + K+ + A +F + I + N L+ LC RR
Sbjct: 227 EEAGCQPNVVTYNILIDSLCKDKLVNEALDIF-SYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + EM P+ ++++L+ +C + +++EA +F +++ G D+V
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ----GVFKTMTEMGVEPDVV 341
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L++ + +I +A ++ + ++ KG K P + + I + + I+ AK L NE
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCK-PDAFSYNILIKGYCKAKRIDEAKQLFNE 400
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G P +Y+ + L GR+ E + M + G P L Y L K+G
Sbjct: 401 MIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGY 460
Query: 347 VDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A + +++ T++ P + +YNIL+ +C GN A ++ Q G + N +
Sbjct: 461 LGKAFRLF--RVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ-GLLPNVQI 517
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y +++ LC++G EA M P +YNV+IRG + A + EM
Sbjct: 518 YTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 170/397 (42%), Gaps = 21/397 (5%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+++A++ F ++ + F LL +VK + A I + + I +L
Sbjct: 74 NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
++L+D +R DLA VF +M G PD +++ L+ GLC + +A F
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF----FD 189
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
G + Y T++ LC G+ A + +K+ G + + + C D
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD- 248
Query: 275 EDIEGAKSLINEAL-------IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L+NEAL + P + +Y+++ L N R E +L+EM +
Sbjct: 249 -------KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P++ + + A+ K+G V EA V + M + P V Y+ L+ G A
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKT-MTEMGVEPDVVTYSSLMYGYSLRMEIVEAR 360
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M + GC + +Y IL+ G C+ R EA ++ EM+ + P YN LI G
Sbjct: 361 KLFDAMITK-GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC +G+ EA + M S LPD+ +S L+ C
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFC 456
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 194/416 (46%), Gaps = 41/416 (9%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L+ + + N + +FN ++ + KE KL+ A F+ VK + + N ++
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAK-EFIGHMETLGVKPNVVTYNTIIHGH 261
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------ 209
C + A +FQ M +G PD +Y+ + GLC + RL EA+ L+
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321
Query: 210 -------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
Y+ + KG +V Y + AL +G++ DA ++++
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381
Query: 251 ILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ KG+ P + H I C C D + G L++E + +G P+L +Y+++ L
Sbjct: 382 MREKGM-MPDAVTHNILINGYCRCGDAKRAFG---LLDEMVGKGIQPTLVTYTSLIYVLG 437
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
R+ E D + +++ +G P ++++ A + +G +D A ++++E M +P
Sbjct: 438 KRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE-MDNMKVLPDE 496
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN L++G C G A L +M K+ G + +Y L+ G + G +A RV +
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEM-KRRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 555
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
EM+ + P + TYN LI+GLC + A L+EM+S+ PD S + S++ ++
Sbjct: 556 EMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 198/439 (45%), Gaps = 41/439 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F +R Y + NEA+ F + + V ++ N +L +K ++ + A +L+
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY-AE 206
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ ++S + + N++++VLC+ + A M+ G P+ +Y+ ++ G C +
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
A +F + KG D Y + + LC +G++++A ++ K+L GL
Sbjct: 267 FQRAR----VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + CN G D++ A + +E + +G + SL +Y+ L+ EGR+ + D ++ E
Sbjct: 323 TYNALIDGYCNKG-DLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT------------------- 362
MR KG P V + + + G A +++E + KG
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441
Query: 363 ---------------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+P + V+N L+ G C GN A LK+M + + + TY
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD-NMKVLPDEITYN 500
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ G CR+G+ EA ++L+EM R P +YN LI G G +A +EM++
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560
Query: 468 AKLPDISVWSSLVASVCCN 486
P I +++L+ +C N
Sbjct: 561 GFDPTILTYNALIQGLCKN 579
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 9/403 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ + I Y + L+ A +F + C ++ L+ + +++ A LF++
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
E +++ +L+ LC R AL++ +EM+ G P+ +Y +L+ LC+ +
Sbjct: 315 -KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A LL M +KG +++ Y L+ C +G I+DA+ ++E + + L +P +
Sbjct: 374 FEKARELLGQML----EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL-SPNT 428
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
R + +L ++ A ++N+ L R +P + +Y+++ G ++L
Sbjct: 429 RTYN-ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P Y + + +L K V+EA ++ + KG P V +Y L+ G C AG
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV-NPNVVMYTALIDGYCKAG 546
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + L+KM + C+ N T+ L+ GLC DG+ EA+ + E+M+ P V T
Sbjct: 547 KVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+LI L G A ++M+S PD +++ + + C
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 228/503 (45%), Gaps = 35/503 (6%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN--------R 60
++P+++S + P TAL F + P Y+H+ YAS++ +L + R
Sbjct: 88 ISPSHVSSLFSLDLDPKTALN-FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 61 ITEMKE---------VID----QMKGDSCECKDSV----FATAIRTYARAGQLNEAVSLF 103
+ +K V+D K + E K + + T + + AR G ++E ++
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N ++ K +E A+ + +L+M CQ
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY-CQ 265
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D A VF EM +GC + +Y L+ GLC RR++EA L F ++
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL----FVKMKDDECFP 321
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ +LC + +A+ +++++ G+K P + + + E A+ L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + L +G +P++ +Y+A+ G I + V++ M ++ P+ Y + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V +A+ V+ + M++ +P V YN L+ G C +GN A L M+ + G V +
Sbjct: 441 SN-VHKAMGVLNK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQ 497
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++D LC+ R EA + + + + P V Y LI G C GK EA + LE+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+S+ LP+ +++L+ +C +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCAD 580
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 197/437 (45%), Gaps = 17/437 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L+ + EMK+V +M D + + Y + G + EA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ +L+ + L++A +F L+ C EV + L+ LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV-----AYTHLIHGLCV 300
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A+ +F +M C+P +Y +L+K LC R +EA +L+ M + G
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGIKP 356
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+I Y L+ +LC Q K + A ++L ++L KGL + + C G IE A +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM-IEDAVDV 415
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ R P+ +Y+ + I Y + + + VL++M + P +V Y + + +
Sbjct: 416 VELMESRKLSPNTRTYNEL-IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G D A ++ +G VP Y ++ LC + A + +Q G N
Sbjct: 475 SGNFDSAYRLLSLMNDRG-LVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNV 532
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y L+DG C+ G+ EA +LE+ML ++ P T+N LI GLC+ GK EA + E+
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 464 MISQAKLPDISVWSSLV 480
M+ P +S + L+
Sbjct: 593 MVKIGLQPTVSTDTILI 609
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 225/528 (42%), Gaps = 42/528 (7%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P + T T L + + + AL + KE +E + N Y +I L + +
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E++ QM + I Y + G + +AV + + + T+++N L+K
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K + +A +L +V + + N L+D C+ D A + M+ +G P
Sbjct: 438 YCKSNVHKAMGVL--NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ +Y ++ LC +R+ EA L F + QKG ++V+Y L+ C GK+ +A
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDL----FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMA 303
+LEK+L K + + C DG+ E +L+ E +++ G+ P++++ + +
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA--TLLEEKMVKIGLQPTVSTDTILI 609
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L +G +M + G P Y + ++G + +A E + +M +
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA-EDMMAKMRENGV 668
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL---------- 413
P + Y+ L+KG D G + A LK+M + GC + T+ L+ L
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 414 -----CRDGRFLEASRV---LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
C +E V LE+M+ S P ++Y LI G+C +G A + M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 466 SQAKL-PDISVWSSLVASVCCNTADLN---------VCRKTLEQLSSC 503
+ P V+++L+ S CC N +C L QL SC
Sbjct: 788 RNEGISPSELVFNALL-SCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 5/274 (1%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TLL +L G + + Q+ ++L + +++ C G ++E A +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG-NVEEANQYVSKI 244
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G P +Y+++ + + KV +EM KG + V Y + L +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA+++ + M PTVR Y +L+K LC + + A+ +K+M ++ G N TY
Sbjct: 305 DEAMDLFVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYT 362
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L+D LC +F +A +L +ML + P V TYN LI G C G +AV +E M S+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 468 AKLPDISVWSSLVASVCCNTAD--LNVCRKTLEQ 499
P+ ++ L+ C + + V K LE+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 172/418 (41%), Gaps = 58/418 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI L +S R+ E ++ D ++ ++ I Y +AG+++EA + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC+ + +FN L+ + + KL+ A L ++ + + +L+ L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A FQ+M G PD +Y ++ C + RL +A M ++ + G D+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE----DMMAKMRENGVSPDLF 673
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG-----------------LKAPKSRRHRIDLC 269
Y +L+ D G+ A +L+++ G +K K + +LC
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFW 328
++ + + L+ + + P+ SY + + + G + +KV D M R +G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG------- 381
PS +++ A L+ K +EA +V+++ + G +P + +L+ GL G
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVG-HLPQLESCKVLICGLYKKGEKERGTS 852
Query: 382 --------------------------NSAVAVMY-LKKMSKQVGCVANGETYGILVDG 412
V Y L + ++ GC + +TY +L++G
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 216/503 (42%), Gaps = 46/503 (9%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
+I + LK F A + + +G ++S++ +L+ E++ V++ MK
Sbjct: 67 VIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHL 126
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAH 135
+ F+ I YA +G L+ A+ LF + + NC + N LL +VK K++ A
Sbjct: 127 KPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVAL 186
Query: 136 ILF---LRSCYGWEVKSRIQSLNLLMDVLCQ----------------------------- 163
L+ L++ G + ++++ LC
Sbjct: 187 QLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMI 246
Query: 164 ----CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
C++ DL A E+ +G P E+Y L+ G C LL M +
Sbjct: 247 IDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM----A 302
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+G ++ ++ ++ A G + +A ++L ++ G P + I + G I
Sbjct: 303 ARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGC-GPDITTYNIMINFSCKGGRI 361
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A L+ +A RG +P+ SY+ + +G V+ +L + G LV Y A
Sbjct: 362 EEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAF 421
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G +D AL V E+ M KG F P ++YNIL+ GLC G + L +M +
Sbjct: 422 IHGVVVAGEIDVALMVREKMMEKGVF-PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDR- 479
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ + L+DG R+G EA ++ + ++ + P + YN +I+G C GK +A
Sbjct: 480 NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 539
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ L EM S PD +S+++
Sbjct: 540 LSCLNEMNSVHHAPDEYTYSTVI 562
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 181/470 (38%), Gaps = 38/470 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L +I E + +I G C + I Y + G L A L
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ +++ L+ K + EA L L + ++ N ++D + A
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQL-LTEMAARGLNMNVKVFNNVIDAEYKYGLVTEA 329
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--------------------- 209
+ + M GC PD +Y+I++ C R+ EA LL
Sbjct: 330 AEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHA 389
Query: 210 ----------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
M +RI++ G D+V Y + + G+I A+ + EK++ KG+ P
Sbjct: 390 YCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGV-FP 448
Query: 260 KSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
++ + I + C G I K L++E L R P + ++ + G + E K+
Sbjct: 449 DAQIYNILMSGLCKKGR-IPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKI 507
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+ KG P +V Y A + K G + +AL + E M P Y+ ++ G
Sbjct: 508 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNE-MNSVHHAPDEYTYSTVIDGYV 566
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ + A+ +M K N TY L++G C+ + A +V M P V
Sbjct: 567 KQHDMSSALKMFGQMMKH-KFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNV 625
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
TY L+ G GK A E M+ LP+ + + L+ + NTA
Sbjct: 626 VTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL-TNTA 674
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 195/457 (42%), Gaps = 26/457 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+ ++I + +TE E++ +M C + + I + G++ EA L
Sbjct: 309 NVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELL 368
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + S+ L+ K+ A + R E KS + S + +
Sbjct: 369 EKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGE-KSDLVSYGAFIHGVVV 427
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D+AL V ++M +G +PD + Y+ILM GLC R+ LL M R Q
Sbjct: 428 AGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQ----P 483
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ ++ TL+ G++ +A++I + I+RKG+ + + C G+ + A S
Sbjct: 484 DVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK-MTDALSC 542
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+NE P +YS + + + K+ +M F P+++ Y + + K
Sbjct: 543 LNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCK 602
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS--AVAVMYLKKMSKQVGCVA 401
+ A E + M VP V Y L+ G AG A ++ L M+ GC+
Sbjct: 603 KADMIRA-EKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMN---GCLP 658
Query: 402 NGETYGILVDGLC-----------RDGRFLEASRVLE---EMLIRSYWPCVETYNVLIRG 447
N T+ L++GL +D + E S +L+ ML+ + + YN +I
Sbjct: 659 NDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVC 718
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G A + L +M+++ L D +++L+ +C
Sbjct: 719 LCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLC 755
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
VL+ M+ + P+ + A + A + G +D AL++ PT N+LL GL
Sbjct: 117 VLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGL 176
Query: 378 CDAGNSAVAVMYLKKMSKQ---VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+G VA+ KM + G V + T I+V GLC G+ E R+++ +
Sbjct: 177 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCC 236
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V YN++I G C G A L E+ + LP + + +L+ C
Sbjct: 237 VPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFC 286
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 135/332 (40%), Gaps = 22/332 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ +Y ++ L + RI MK ++ +M + + VFAT I + R G+L+EA+ +F
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + +N ++K K K+ A + L + + ++D +
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA-LSCLNEMNSVHHAPDEYTYSTVIDGYVK 567
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGS 221
AL +F +M P+ +Y L+ G C + A + M F +
Sbjct: 568 QHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVP---- 623
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN--------- 272
++V Y TL+ GK + A I E +L G + H + N
Sbjct: 624 --NVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIE 681
Query: 273 DGEDIEGAKSLINE----ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+ + E +SLI + L+ G +A+Y+++ + L G + +L +M TKGF
Sbjct: 682 EKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFL 741
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
V + A L L G E +I ++ K
Sbjct: 742 IDSVCFTALLHGLCHKGKSKEWRNIISCDLNK 773
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 132/560 (23%), Positives = 239/560 (42%), Gaps = 81/560 (14%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
T +++ +I +QKS AL+ F+ A PN+ HN Y ++I L R +KEV+D
Sbjct: 93 THQHIAHLILEQKSASQALQTFRWA-SNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLD 151
Query: 70 QMKGDSCECKD-SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+M D S+F T +R RA + + + + +++F + FN++L +VKE
Sbjct: 152 EMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE 211
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE- 187
++ A + + V + +LM LC R A + Q M +G P+
Sbjct: 212 D-IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVI 270
Query: 188 ------------------------------SYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++++L+ C + L +A LL F
Sbjct: 271 YNTMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSF---- 326
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G D+V ++ LC G++ + +++LE++ G + + C G+
Sbjct: 327 SMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAK 386
Query: 278 EGAKSLINEALIRGGIPSLASYSAMA------------IDLYNE---------------- 309
G + ++ + I+G +P++ +Y+ +A IDL+N+
Sbjct: 387 VGHR-VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTL 445
Query: 310 -------GRIVEGDKVLDEMRTK--GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
GR+ +G K+L+ M G + Y + + L+K +EALE + + M K
Sbjct: 446 IRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTK-MEK 504
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P ++ + G C+ G+ A +M K+ G V + Y L+ G C+DG
Sbjct: 505 --LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKE-GGVPSVLVYVCLIHGFCQDGNVR 561
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA ++ EM+ Y+P T+N LI C GK A+ +E+M+ + LPD+ +S +V
Sbjct: 562 EAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMV 621
Query: 481 ASVCCNTADLNVCRKTLEQL 500
++ CN D + Q+
Sbjct: 622 DAL-CNKGDFQKAVRLFLQM 640
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 198/448 (44%), Gaps = 69/448 (15%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y +MI L ++ ++ + ++++M E D F I Y + L +A+ L
Sbjct: 267 NTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLL 322
Query: 104 KNLSQFNCVNWTQSFNT-LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL- 161
+ +SF+ + ++V +K+ R G EV R++S+ ++DV+
Sbjct: 323 E-----------KSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVA 371
Query: 162 --------CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
C ++ + V ++M+ +GC P+ ++Y+IL G C+ L+ A L M
Sbjct: 372 YNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM- 430
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
G + + Y TL+ LC G+++D +ILE
Sbjct: 431 ---KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE------------------------ 463
Query: 274 GEDIEGAKSLINEALIRGGIPS-LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
L+ E+ RGG ++ Y+++ LY + + E + L +M +P V
Sbjct: 464 ---------LMEES--RGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAV 510
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
++ +G + +A V ++ M+K VP+V VY L+ G C GN A + +
Sbjct: 511 DRSLRILGFCNEGSIGDAKRVYDQ-MIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 569
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M G T+ L+ C G+ A +++E+M+ R P + +Y+ ++ LC+ G
Sbjct: 570 MVDH-GYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKG 628
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+AV +M+ + LPD S W+S++
Sbjct: 629 DFQKAVRLFLQMVEKDILPDYSTWNSML 656
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 121/280 (43%), Gaps = 10/280 (3%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEM 125
V+ M+ C + Y +G L+ A+ LF ++ + +NW +++TL++ +
Sbjct: 391 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKT-DGINWNFMTYDTLIRGL 449
Query: 126 VKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++E IL L RI N ++ L + + + AL +M + +P
Sbjct: 450 CSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFP 507
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ + G CN+ + +A + M ++G +++Y L+ C G +++A
Sbjct: 508 RAVDRSLRILGFCNEGSIGDAKRVYDQMI----KEGGVPSVLVYVCLIHGFCQDGNVREA 563
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++ +++ G + + C G+ + A L+ + + RG +P + SYS M
Sbjct: 564 FELINEMVDHGYFPTAPTFNALISAFCGQGK-VGSALKLMEDMVGRGCLPDMGSYSPMVD 622
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
L N+G + ++ +M K P + + L L ++
Sbjct: 623 ALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 193/407 (47%), Gaps = 20/407 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRS 141
F T + GQ+ +A LF + ++ Q S+ TL+ + K + AA L L+
Sbjct: 158 FTTLSKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL-LQR 215
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G V+ + N ++D +C+ + + A +F EM +G PD +Y L+ G C +
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK 275
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L +A L F ++ + D+ + L+ A C GK+++ + + ++++G+K
Sbjct: 276 LKDAIDL----FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP--- 328
Query: 262 RRHRIDLCPCNDG----EDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + DG +++ AKS+ N + +GG+ P + SYS M + E
Sbjct: 329 --NFVTYNSLMDGYCLVKEVNKAKSIFN-TMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ EM K P +V Y + + L K G + AL+++++ +G P + YN +L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV-PPNICTYNSILDA 444
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC A+ L K K G + TY IL+ GLC+ G+ +A +V E++L++ Y
Sbjct: 445 LCKTHQVDKAIALLTKF-KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNL 503
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V Y ++I+G C G EA+ L +M +PD + ++ S+
Sbjct: 504 DVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 201/454 (44%), Gaps = 46/454 (10%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+++ T+ +++AVSLF L + N FN +L +VK +L+L
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHT--VLYLSQK 110
Query: 143 YGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ +K + + N+L++ CQ A VF ++ G PD ++ L KGLC +
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A + ++ G D + Y TL+ LC G+ + A+ +L+++ L P
Sbjct: 171 IQQA----FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGNLVQPNV 225
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLYN- 308
+ + + + A L +E + +G P + +YSA+ AIDL+N
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 309 ----------------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G++ EG V D M +G P+ V Y + +
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A + I M +G P ++ Y+I++ G C A+ K+M ++ + + TY
Sbjct: 346 VNKA-KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTY 403
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGL + GR A +++++M R P + TYN ++ LC + +A+ L +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ PDIS +S L+ + C + L RK E L
Sbjct: 464 KGFQPDISTYSILIKGL-CQSGKLEDARKVFEDL 496
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 185/398 (46%), Gaps = 8/398 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + G + A S+F + + V T +F TL K + + +++ A LF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA-FLFHDKVVALG 185
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S L+ LC+ + AL + Q +D P+ Y+ ++ +C + +NEA
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA- 244
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +F + KG D+V Y L+ C GK++DA+ + K++ + +K + +
Sbjct: 245 ---FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C DG+ EG K++ + + +G P+ +Y+++ + + + + M G
Sbjct: 302 VNAFCKDGKMKEG-KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + K DEA+ + +E M + +P V Y+ L+ GL +G + A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKE-MHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ + +M + G N TY ++D LC+ + +A +L + + + P + TY++LI+
Sbjct: 420 LQLVDQMHDR-GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A E+++ + D+ ++ ++ C
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 186/424 (43%), Gaps = 44/424 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + +++ ++ G+ + ++ T I + + +NEA LF +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+++ L+ KL+ A LF + +K + + N+L++ C+ +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL-ENIKPDVYTFNILVNAFCKDGKM 311
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
VF M QG P+ +Y+ LM G C + +N+A S+F ++Q G DI
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK----SIFNTMAQGGVNPDIQS 367
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++ C K +AM + +++ RK +
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNI------------------------------- 396
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
IP + +YS++ L GRI +++D+M +G P++ Y + L AL K V
Sbjct: 397 -----IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQV 451
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A+ ++ + KG F P + Y+IL+KGLC +G A + + + G + Y
Sbjct: 452 DKAIALLTKFKDKG-FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYT 509
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
I++ G C +G F EA +L +M P +TY ++I L + A L EMI++
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569
Query: 468 AKLP 471
LP
Sbjct: 570 G-LP 572
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 171/389 (43%), Gaps = 43/389 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + + + E ++ +M ++ I + G+L +A+ LF
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ N +FN L+ K+ K++ +F +K + N LMD C
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF-DMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A +F M G PD +SY I++ G C ++ +EA +L F + +K
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL----FKEMHRKNIIP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y +L+ L G+I A+Q+++++ +G+
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP-------------------------- 432
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+++ L ++ + +L + + KGF P + Y + L +
Sbjct: 433 ----------PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +++A +V E+ +VKG + V Y I+++G C G A+ L KM GC+ +
Sbjct: 483 SGKLEDARKVFEDLLVKG-YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDN-GCIPDA 540
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+TY I++ L + A ++L EM+ R
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIAR 569
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 224/477 (46%), Gaps = 19/477 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++ T L K P + +A +++ R + +Y S+I ++ +
Sbjct: 88 PDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF---RPDVFLYTSVIHGYCKAGDLDTGF 144
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++++M C + + I + G+++EA LF+ + + C+ +F TL++ +
Sbjct: 145 KILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEAL 204
Query: 126 VKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
KL+ A L+ G+E +Q + L+ LC+ + D A ++Q + +
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQ--DSLIFALCKAGKVDEANEIYQTVVAKKVAT 262
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
R +Y+ LM G C R+++ LL M + + DI Y L+ ++ DA
Sbjct: 263 SRVAYNSLMDGYCKLGRVDDGLKLLLQMV----ECDNFPDIQTYNILVAGFSRANRLDDA 318
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++ + + G K P + + + D + +E AK+ +EAL + SY+ +
Sbjct: 319 LELFKLLSSYGCK-PNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIK 371
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + RI E ++ ++++T G P++V Y A + L K G +++ L+ E+M + V
Sbjct: 372 GLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF-EDMSGSSCV 430
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT Y +++ GLC A A ++M Q GCV + TY L+DG + + EA +
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMV-QKGCVPDTITYTTLIDGFSKASKMDEARK 489
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+L+ ML + P TY ++ G C + EA + +M + P + +++SL++
Sbjct: 490 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 203/481 (42%), Gaps = 56/481 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAV 100
+ N Y ++I L ++ R+ E K D E D + + T I+ A + +++EA
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFD-------EALDVISYTTVIKGLADSKRIDEAC 383
Query: 101 SLFKNLSQFNC----VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
LF+ L C V +T + LLK E L+ + SC V +R + +
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC----VPTR-TTYTV 438
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++D LC+ + A VF++M +GC PD +Y L+ G +++EA LL M
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML--- 495
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
KG V Y +++ C I +A +++ ++ +G + + + G
Sbjct: 496 -TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR- 553
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A ++ E RG P + Y+++ L++ GR+ E V D M KG P + Y
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613
Query: 337 KLAALFKDGMVDEALEVIE----------------------------------EEMVKGT 362
+ K G V+ A E++E + MV
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P +N+L+ GL G + A K+M ++ +Y IL+DGL + GR EA
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+EM+ R P TY LI L G+ EA +E+M+ PD+ +S+L+
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793
Query: 483 V 483
+
Sbjct: 794 L 794
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 199/438 (45%), Gaps = 11/438 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ RI + + + M G SC + + I +A L +A +F
Sbjct: 397 NVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 456
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + Q CV T ++ TL+ K SK+ EA +L + G E + + ++ C
Sbjct: 457 EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA--VTYGSIVHGFC 514
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A V +M +GC P + L+ + R EA Y + ++ +G
Sbjct: 515 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA----YQVLTEMTARGCA 570
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+++Y +L+ L G++ +A + + ++ KG AP + + + + ++E A
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC-APDALTYGTIIQNFSKIGNVEAAGE 629
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ E + + G+ P +Y+++ R+ + V D M G P+ V + + L
Sbjct: 630 IL-ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
FKDG D A + +E + K PT+ Y IL+ GL AG + A ++M + G +
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR-GIIP 747
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+ L + GR EA +++E+M+ P V+ Y+ LI GL A
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807
Query: 462 EEMISQAKLPDISVWSSL 479
+EM+ + P+ + L
Sbjct: 808 QEMMKRGCAPNEVTYKVL 825
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 202/497 (40%), Gaps = 79/497 (15%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L ++ +I + E+ +M CE + T I A +++EA F ++ C
Sbjct: 30 LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPD 89
Query: 115 TQSFNTLLKEMVKESKLEAAHIL------------FLRS------CYGWEVKSRIQSLN- 155
+F TL+ K + + H+L FL + C ++ + + L
Sbjct: 90 VIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEE 149
Query: 156 --------------LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+L+D LC+ R D A +F+ M GC D ++ L++ L N +
Sbjct: 150 MLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK- 260
L+EA L M R G + + +L+FALC GK+ +A +I + ++ K + +
Sbjct: 210 LDEACELYREMIER----GYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265
Query: 261 ---------SRRHRID--------LCPCNDGEDIEGAKSLI---------NEAL------ 288
+ R+D + C++ DI+ L+ ++AL
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 289 -IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P+ A+Y+ + LY+ R+ E DE ++ Y + L +
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRI 379
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA E+ E+ G P V Y ++ GL AG + + MS CV TY
Sbjct: 380 DEACELFEKLKTAGC-SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS-SCVPTRTTYT 437
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++DGLC+ +A +V E+M+ + P TY LI G K EA L+ M+++
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497
Query: 468 AKLPDISVWSSLVASVC 484
P + S+V C
Sbjct: 498 GPEPTAVTYGSIVHGFC 514
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 161/327 (49%), Gaps = 10/327 (3%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N++++ LC+ R+ D A+ +F EM GC P SY+ ++ GL + +++EA Y F
Sbjct: 24 NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA----YKFFN 79
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G D++ + TL+ C G+ Q +L + L++ + + C G
Sbjct: 80 SMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAG 138
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
D++ ++ E L G IP A+Y + L GR+ E ++ + MR G V +
Sbjct: 139 -DLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKM 393
+ AL G +DEA E+ EM++ + P + V + L+ LC AG A +Y +
Sbjct: 198 MTLIEALSNHGKLDEACELY-REMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV 256
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+K+V + Y L+DG C+ GR + ++L +M+ +P ++TYN+L+ G +
Sbjct: 257 AKKVA--TSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANR 314
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLV 480
+A+ + + S P+ + +++++
Sbjct: 315 LDDALELFKLLSSYGCKPNAATYTTII 341
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 18/343 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ + + I E KEVI QM+ CE +F + + Y G+ EA + +
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHI---LFLRSCY--GWEVKSRIQSLNLLMDV 160
+ C + +L+ + ++ EA H+ + + C + IQ+ + + +V
Sbjct: 565 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 624
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ A + + M G PD +Y+ LM G R+++A + ++ R+ G
Sbjct: 625 -------EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA----FGVYDRMVASG 673
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ V + L+ L GK A + +++L K P + I + + A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
S E + RG IP +Y+++ L GRI E K++++M G P + Y A +
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
L MVD A +V +E M +G P Y +L +G AG +
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGC-APNEVTYKVLRRGFRAAGRA 835
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L EM T G P +V L L K +D+A+E+ E G PT+ YN ++ GL
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGC-EPTIVSYNTVISGLA 66
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A + M GC + + L+ G C+ G+ +L + L R + P V
Sbjct: 67 SIDKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDV 124
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y +I G C G LEEM++ +PD + + L+ +C
Sbjct: 125 FLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLC 170
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 225/488 (46%), Gaps = 44/488 (9%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFK 104
P Y ++I L+ + R+ + + + S ++ +IR YARAG+L +AV F+
Sbjct: 18 PAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFE 77
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ F C ++N ++ +V + + AH +++R V + + + + C
Sbjct: 78 RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML-AAGVSPDLHTHTIRLRSFCLT 136
Query: 165 RRSDLALHVFQEMDFQGC-------------------------------YPDRESYHILM 193
R +AL + + + +G +P+ +++ ++
Sbjct: 137 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 196
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
LC + EA LL ++ Q+G ++ Y + LC+ G++ +A+++++ +
Sbjct: 197 HALCKRGDVLEAGLLL----GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-- 250
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ P + + + A + + +G +P +Y+ + ID Y + +V
Sbjct: 251 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI-IDGYCKISMV 309
Query: 314 -EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++L + KGF P V Y + + L +G V+ ALE+ E KG P + VYN
Sbjct: 310 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG-IKPDIVVYNS 368
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+KGLC G A+ + +M+++ GC + +TY I+++GLC+ G +A+ V+ + +++
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 427
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
Y P V T+N LI G C K A+ +E M PD ++S++ + C +N
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL-CKAGKVNE 486
Query: 493 CRKTLEQL 500
+T +++
Sbjct: 487 VNETFQEM 494
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 184/398 (46%), Gaps = 19/398 (4%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G ++A LF + + +FN +L + K + A +L +V R S
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL------GKVIQRGMS 221
Query: 154 LNLL-----MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+NL + LC+ R A+ + M PD +Y+ L++GLC EA H
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 280
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
L R+ +G D Y T++ C +Q+A ++L+ + KG + +
Sbjct: 281 L----RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C +G D+E A L NEA +G P + Y+++ L +G I+ +V++EM +G
Sbjct: 337 GLCAEG-DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y + L K G + +A V+ + ++KG ++P V +N L+ G C A+
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSALQ 454
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+++M + G + TY +++GLC+ G+ E + +EM+++ P TYN+LI
Sbjct: 455 LVERMW-EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C K EA + +M + PD +++L+ C N
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 551
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 48/437 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGW 145
IR AG+L EAV L + + V ++NTL++ + K+S EA H +LR
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMH--YLRRMMNQ 287
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ N ++D C+ A + ++ F+G PD+ +Y L+ GLC + + A
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L F KG DIV+Y +L+ LC QG I A+Q++ ++ +G P + +
Sbjct: 348 LEL----FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-PDIQTYN 402
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRT 324
I + +I A ++N+A+++G +P + +++ + ID Y ++ ++++ M
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL-IDGYCKRLKLDSALQLVERMWE 461
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P + Y + L L K G V+E E +E ++KG P YNIL++ C +
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH-PNPITYNILIENFCRSNKME 520
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF---------LE-------------- 421
A + KMS++ G + ++ L+ G CR+G LE
Sbjct: 521 EASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTL 579
Query: 422 ------------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
A ++ +EML + + TY VLI G C A M L EMI +
Sbjct: 580 IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 639
Query: 470 LPDISVWSSLVASVCCN 486
+P +S + ++ S+ N
Sbjct: 640 IPSMSTFGRVINSLTVN 656
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 193/446 (43%), Gaps = 20/446 (4%)
Query: 43 HNGPV-YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
H G V Y +++ L + +++ DQM + F + + G + EA
Sbjct: 151 HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 210
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + Q ++N ++ + + +L A + + + V + + N L+ L
Sbjct: 211 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPD-VVTYNTLIRGL 268
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ A+H + M QGC PD +Y+ ++ G C + EAT LL + KG
Sbjct: 269 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF----KGF 324
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y +L+ LC +G ++ A+++ + KG+K + + C G I A
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL-ILHAL 383
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++NE G P + +Y+ + L G I + V+++ KG+ P + + +
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG-----NSAVAVMYLKKMSKQ 396
K +D AL+++E M + P YN +L GLC AG N M LK
Sbjct: 444 CKRLKLDSALQLVER-MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK----- 497
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N TY IL++ CR + EAS+V+ +M P ++N LI G C G
Sbjct: 498 -GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556
Query: 457 AVMWLEEMISQAKLPDISVWSSLVAS 482
A + +++ + +++L+ +
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGA 582
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 188/426 (44%), Gaps = 8/426 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + + E + +M C D + T I Y + + EA L K+
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 320
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V ++ +L+ + E +E A LF +K I N L+ LC
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELF-NEAQAKGIKPDIVVYNSLVKGLCLQGLI 379
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V EM +GC+PD ++Y+I++ GLC +++AT ++ KG D+
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM----KGYLPDVFT 435
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL+ C + K+ A+Q++E++ G+ AP + + L + E
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+++G P+ +Y+ + + ++ E KV+ +M +G P V + + ++G +
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ A + ++ KG + T +N L+ N +A +M + G A+ TY
Sbjct: 555 EGAYLLFQKLEEKG-YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTYR 612
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L+DG C+ A L EM+ + + P + T+ +I L + ++AV + M+
Sbjct: 613 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 672
Query: 468 AKLPDI 473
+P++
Sbjct: 673 GVVPEV 678
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 210/473 (44%), Gaps = 14/473 (2%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
KI K + P + ++I L +I E + D+M + + + T I
Sbjct: 116 KILKLGHQPDPT------TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+ G + A+ L +++ Q NC + +++ + K+ ++ A LF G +
Sbjct: 170 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF-SQMVGQGIS 228
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
I + L+ LC + +M PD + ++ LC + ++ EA +
Sbjct: 229 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 288
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ M Q+G D+V Y TL+ C Q ++ +A+++ + ++RKG AP + +
Sbjct: 289 VDMMI----QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF-APDVISYTTLI 343
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
I+ A L E + IP +Y+ + L + GR+ + + EM +G
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P LV Y L +L K+ ++EA+ +++ + P ++VYNI++ G+C AG A
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKA-IEASNLNPDIQVYNIIIDGMCRAGELEAARD 462
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+S + G + TY I++ GLC+ G EA+++ EM P TYN + RG
Sbjct: 463 LFSNLSSK-GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 521
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ A+ LEEM+++ D+S + LV + + D + C L LS
Sbjct: 522 LQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLS 574
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 187/392 (47%), Gaps = 10/392 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSL 154
L++A+S F L + F LL + K L + +G V + +L
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG--VPPNVYTL 94
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C R A V ++ G PD ++ L++GLC + ++ EA HL F
Sbjct: 95 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL----FD 150
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++ +G ++V Y TL+ LC G A+++L + + + I C D
Sbjct: 151 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR 210
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A +L ++ + +G P + +Y+++ L N +L++M P +V++
Sbjct: 211 QVTE-AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+G V EA E+++ + +G P V Y L+ G C AV M
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 328
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ G + +Y L++G C+ + +A + EEM + + P +TYN L+ GLC +G+
Sbjct: 329 RK-GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM+++ ++PD+ +S L+ S+C N
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 9/420 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
FA + + A+ + +SL + F + N L+ +++ A + L
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV-LAKI 117
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + L+ LC + ALH+F +M +G P+ +Y L+ GLC
Sbjct: 118 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 177
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL SM Q D+VIY +++ +LC ++ +A + +++ +G+
Sbjct: 178 SAAIRLLRSM----EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN E + +L+N+ + +P + +S + L EG++ E +++D M
Sbjct: 234 YTSLVHALCNLCE-WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P +V Y + +DEA++V + MV+ F P V Y L+ G C
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM-MVRKGFAPDVISYTTLINGYCKIHK 351
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ ++M ++ + + +TY L+ GLC GR +A + EM+ R P + TY+
Sbjct: 352 IDKAMYLFEEMCRK-EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 410
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+L+ LC EA+ L+ + + PDI V++ ++ + C +L R LSS
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM-CRAGELEAARDLFSNLSS 469
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 204/440 (46%), Gaps = 8/440 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +I E R + E D MKG + + ++ + +A L+ +
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +FN ++ + KE KL+ A F+ +K + + N ++ C R
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAK-EFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F M +G PD +Y + G+C + +L EA+ M ++ + G V
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS----GMLEKMKEIGLRPTAV 297
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ C++G ++ A +K++R+GL S + + D + ++ A +I E
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK-MDEADGIIKE 356
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G +P +Y+ + G + + + DEM +KG P+ V Y + + L K G
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A ++ E+ + KG F P + ++N L+ G C GN A LK+M Q+ V + T+
Sbjct: 417 MKQADDLFEKIVRKGIF-PDLIMFNALIDGHCANGNMDRAFAMLKEMD-QMKVVPDEVTF 474
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ G CR+G+ A ++EEM R P +YN LI G G +A +EM+S
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
Query: 467 QAKLPDISVWSSLVASVCCN 486
P + +++L+ +C N
Sbjct: 535 IGFNPTLLTYNALIQGLCKN 554
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 171/372 (45%), Gaps = 8/372 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++I R+ + + D MK + + + I + G+L EA
Sbjct: 223 KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + + ++NTL+ + LE A + + + + N+L+ L
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA-FDYRDKMVREGLMPTVSTYNMLIHAL 341
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ D A + +EM +G PD +Y+IL+ G C + +A +++ + KG
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKA----FTLHDEMISKGI 397
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
V Y +L++ L +G+++ A + EKI+RKG+ + + C +G +++ A
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANG-NMDRAF 456
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+++ E +P +++ + EG++ ++++EM+++G P + Y ++
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G + +A V +EM+ F PT+ YN L++GLC A LK+M + G
Sbjct: 517 SKRGDMKDAFRV-RDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK-GITP 574
Query: 402 NGETYGILVDGL 413
N TY L++G+
Sbjct: 575 NDNTYLSLIEGI 586
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 157/367 (42%), Gaps = 63/367 (17%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL--MKGLCNDRRLNEATHL 208
I+S L M V+ S +L + +E G Y RE ++ L +G+ L T++
Sbjct: 68 IKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGV-----LGIKTYV 122
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------- 255
LY + L+ A C+ + DA + + + KG
Sbjct: 123 LYDL------------------LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLS 164
Query: 256 --LKAPKSR----------RHRIDLCP----------CNDGEDIEGAKSLINEALIRGGI 293
LK+ ++ R RI C +G+ ++ AK I G
Sbjct: 165 LFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGK-LKKAKEFIGLMEALGIK 223
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + + GR+ + D M+ +G P Y + ++ + K+G ++EA +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ E+M + PT YN L+ G C+ GN +A Y KM ++ G + TY +L+ L
Sbjct: 284 L-EKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVRE-GLMPTVSTYNMLIHAL 341
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
D + EA +++EM + P TYN+LI G C G +A +EMIS+ P
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401
Query: 474 SVWSSLV 480
++SL+
Sbjct: 402 VTYTSLI 408
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/537 (23%), Positives = 225/537 (41%), Gaps = 72/537 (13%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+++ +I Q S AL+ FK A P + H+ Y ++I L +R + +++D+M
Sbjct: 41 HIAHLILDQNSATKALQTFKWA-SNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMP 99
Query: 73 GDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
D +F T IR RA + + + +S+F + FN++L +VK +
Sbjct: 100 HAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVK-VDI 158
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+ A + + G V+ + +LM LC R + Q M +G P+ Y+
Sbjct: 159 DVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNT 218
Query: 192 LMKGLCNDRRLNEATHLL---------------------------YSMFWRISQKGSGED 224
L+ LC + ++ A L+ + + G D
Sbjct: 219 LLHALCKNGKVGRARSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPD 278
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V ++ LC+ G++ +A+++LE++ KG + + C G+ I+ A +
Sbjct: 279 VVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGK-IKVAHRFL 337
Query: 285 NEALIRGGIPSLASYSA------------MAIDLYNE----------------------- 309
E +G +P++ +Y+ MA+D++N+
Sbjct: 338 KEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFG 397
Query: 310 GRIVEGDKVLDEMRTK--GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
GRI EG K+L+ M G + Y + L L+K M DEALE + M P
Sbjct: 398 GRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFL---MKMEKLFPRA 454
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
++ + G C+ G A M +M + G N Y LV G C++G EA ++
Sbjct: 455 VDRSLRILGFCEKGAVKNAKMVFDQMINE-GGTPNILVYDCLVHGFCQEGNLREAFELMN 513
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+ Y+ +N LI G C GK A+ L++M+ + +PD +S L+ ++C
Sbjct: 514 EMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALC 570
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 128/299 (42%), Gaps = 10/299 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ +I + +M+ C + I + +G + A+ +F ++
Sbjct: 317 YNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMK 376
Query: 108 QFNCVNWT-QSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ ++W +++TL+K + ++E IL L RI N ++ L +
Sbjct: 377 T-DGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKN 435
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D AL +M + +P + + G C + A +F ++ +G +I
Sbjct: 436 MWDEALEFLMKM--EKLFPRAVDRSLRILGFCEKGAVKNAK----MVFDQMINEGGTPNI 489
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
++Y L+ C +G +++A +++ +++ G S + + C G+D E A L++
Sbjct: 490 LVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKD-ESALKLLD 548
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ + RG +P +YS + L +G + + ++M KG P + + L L K+
Sbjct: 549 DMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 224/506 (44%), Gaps = 58/506 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E Y +G V + ++ S+ + + E+I++M+ + F
Sbjct: 253 ALSVFNEI---YGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVL 309
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGW 145
I + R ++++A+ LFK + + ++ L+ + + ++E A H+L G
Sbjct: 310 IHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI 369
Query: 146 E----------------------VKSRIQSL---------NLLMDVLCQCRRSDLALHVF 174
+ ++ R++ L N +++ L + D A ++
Sbjct: 370 DPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLL 429
Query: 175 QEM-------DFQ---------GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ M +F+ PD S+ I++ GLCN +L+ L S+F + +
Sbjct: 430 RAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLD----LALSLFRDMVR 485
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +++++Y L+ L + ++++ +L+++ G + + + I C C ED+
Sbjct: 486 VGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRR-EDVT 544
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
GA ++ E + G P + Y+ + L R E L EM +GF P +V Y A +
Sbjct: 545 GALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 604
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K VD+ALE+ + +G + P V YN L+ G C + A L +M + G
Sbjct: 605 DGFVKIKAVDQALEIFRDICARG-YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK-G 662
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
V + TY +L+DG C++G +A L M+ + P V TY LI GLC+ G+ +A+
Sbjct: 663 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAI 722
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
EM + P+ + +L+ +C
Sbjct: 723 HLWNEMRGKGCSPNRISFIALIHGLC 748
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 214/531 (40%), Gaps = 76/531 (14%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
+LT + ++ KS A + F A ++ + HN Y +M LS + + + +
Sbjct: 92 MLTHEVVENVLSGLKSWKIAYRFFNWASDQ-GGFNHNCYTYNAMASCLSHARQNAPLSLL 150
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFNTLLKEMV 126
+ C IR G + EA LF + CV + SFN LL+ +
Sbjct: 151 SMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAIS 210
Query: 127 KESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K ++ + C GWE +L ++ C R+ D AL VF E+ +G + D
Sbjct: 211 KSGSIDLVEMRLKEMCDSGWEPDK--YTLTSVLQAYCNSRKFDKALSVFNEIYGRG-WVD 267
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
IL+ +++A + + R+ G + + L+ Q ++ A+
Sbjct: 268 GHVLSILVLTFSKCGEVDKA----FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKAL 323
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS------LASY 299
Q+ +K+ + G AP + + ++IE A L++E G P L +Y
Sbjct: 324 QLFKKMQKSGF-APDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAY 382
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA--------- 350
+ +D+Y R++E + L+++ T+ L++Y + L L VD+A
Sbjct: 383 CSEEVDIY---RLIE--ERLEDLDTEAM---LLLYNSVLNGLVNGKSVDKAYYLLRAMTG 434
Query: 351 ------LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
EV + MVK P ++I++ GLC+ G +A+ + M + VGC N
Sbjct: 435 DNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVR-VGCKQNVL 493
Query: 405 TYGILVDGLCRDGRFLE-----------------------------------ASRVLEEM 429
Y L+D L R E A ++ EM
Sbjct: 494 LYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREM 553
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + P ++ Y +L++ LC + EA +L EM+ + LPDI +S+ +
Sbjct: 554 RVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 604
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 22/419 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
V + + T+++ G++++A L + + ++F L+ V++S+++ A LF +
Sbjct: 270 VLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLF-KK 328
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR- 200
+ + L+ LC + + ALH+ EM G PD + L+ C++
Sbjct: 329 MQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYCSEEV 387
Query: 201 --------RL----NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
RL EA LLY+ G D Y LL A+ D ++
Sbjct: 388 DIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY--LLRAMTGD-NYTDNFEVN 444
Query: 249 EKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ + K + P + I + CN G+ ++ A SL + + G ++ Y+ + L
Sbjct: 445 KFFMVKEMVRPDTTSFSIVIDGLCNTGK-LDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 503
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
N R+ E +L EM+ GF P+ + + L + V AL+++ E V G P +
Sbjct: 504 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHG-HEPWI 562
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+ Y +L+K LC SA A +L +M ++ G + + Y +DG + +A +
Sbjct: 563 KHYTLLVKQLCKRKRSAEACNFLAEMVRE-GFLPDIVAYSAAIDGFVKIKAVDQALEIFR 621
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++ R Y P V YN LI G C + + EA L+EM+++ +P + ++ L+ C N
Sbjct: 622 DICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKN 680
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ I G+L+ A+SLF+++ + C +N L+ ++ ++LE ++L L+
Sbjct: 460 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLL-LKEM 518
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + N + C CRR D+ AL + +EM G P + Y +L+K LC +
Sbjct: 519 KGSGFRPTQFTHNSIFG--CLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576
Query: 201 RLNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYR 229
R EA + L M F I +G D+V Y
Sbjct: 577 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ C ++ +A IL++++ KGL + + C +G DI+ A ++ +
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNG-DIDQAFHCLSRMVG 695
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ P++ +Y+ + L N GR + + +EMR KG P+ + + A + L K G D
Sbjct: 696 KEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDA 755
Query: 350 AL----------------------------------EVIEEEMVKGTF 363
AL E+++E + KG F
Sbjct: 756 ALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKF 803
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 78 CKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
C D V + T I + + +++EA + + V ++N L+ K ++ A
Sbjct: 629 CPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFH 688
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
R G E + + + L+D LC R D A+H++ EM +GC P+R S+ L+ GL
Sbjct: 689 CLSRMV-GKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 747
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C + A LLY +R + D ++Y L+ + A +IL++++ KG
Sbjct: 748 CKCGWPDAA--LLY---FREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 801
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 216/483 (44%), Gaps = 55/483 (11%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIF----KEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
++P LS +++ QK P AL++F + E +R++ Y +I L + EM
Sbjct: 75 ISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDEM 134
Query: 65 KEVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+E++ Q+K ++ + +F I Y RA + A +F+ + F C +S N+LL
Sbjct: 135 EEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLA 194
Query: 124 EMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++K +LE +F+ S YG + N+L+ C C D VF EM +G
Sbjct: 195 ALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 251
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGSGEDIVIYRTLLFALCDQGK 240
P+ ++ L+ GL + +L EA L M + I S IY TL+ C G+
Sbjct: 252 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNAS-----IYTTLIKGFCGVGE 306
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A ++ E+++ +K L++ A YS
Sbjct: 307 LNFAFKLKEEMVTSNVK-------------------------LVS-----------AVYS 330
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L+ GR E +L EM G P V Y A + K+ ++ A V++E + K
Sbjct: 331 TLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEK 390
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P V +N ++ LC G A+ L+ M ++ GC + +Y I+ DGLC +
Sbjct: 391 GC-KPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRR-GCPPDVLSYRIIFDGLCEMMQLK 448
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ +L+EM+ + Y P E+ N L+ LC M L + ++ ++ +W+ +V
Sbjct: 449 EATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMILNSLGRGNRM-NMDMWARVV 507
Query: 481 ASV 483
A V
Sbjct: 508 AFV 510
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 11/279 (3%)
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL- 268
+ +F RI + +LL AL +++ Q+ I G +P + I +
Sbjct: 171 FQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG--SPDACTFNILIH 228
Query: 269 --CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTK 325
C C D + + G + +E RG P++ ++ + L ++ E ++ ++M +
Sbjct: 229 AACLCGDLDAVWG---VFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVY 285
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P+ +Y + G ++ A + ++EEMV VY+ L+ L G
Sbjct: 286 MIKPNASIYTTLIKGFCGVGELNFAFK-LKEEMVTSNVKLVSAVYSTLISALFKHGRKEE 344
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
L++M + GC + TY +++G C++ A RV++EM+ + P V ++N +I
Sbjct: 345 VSDILREMGEN-GCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 403
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC GK +A+ LE+M + PD+ + + +C
Sbjct: 404 GWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLC 442
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 217/466 (46%), Gaps = 14/466 (3%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K K T L +F+ K +Y + N + +I + I V+ ++ E
Sbjct: 82 KSKHYHTVLSLFQ--KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPD 139
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
T I+ + GQ+++A++ L S+ TL+ + K + AA + L
Sbjct: 140 TITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA-LELL 198
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
R G V+ + + ++D +C+ + + A ++ EM + + +Y L+ G C
Sbjct: 199 RRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIV 258
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L +A L F +++ + D+ + L+ A C +G++++A L ++++G+K
Sbjct: 259 GKLKDAIGL----FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 314
Query: 260 KSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C N+ + AKS++N RG ++ SY+ + + + K
Sbjct: 315 IVTYNSLMDGYCLVNE---VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMK 371
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ EM K +P+++ Y + + L K G + ALE+I+ +G P + Y+ +L L
Sbjct: 372 LFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ-QPDIITYSSILDAL 430
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A+ L K+ Q G N TY IL+DGLC+ GR +A + E++L++ Y
Sbjct: 431 CKNHLVDKAIALLIKLKDQ-GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V TY V+I+G CS G EA+ L +M + +PD + ++ S+
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL 535
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 9/404 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+T+ T+ + +AVSLF L + N F +L +VK LF +
Sbjct: 39 FSTS-TTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKME 97
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
Y +K + N+L++ CQ A V ++ G PD + + +KG C L
Sbjct: 98 YRG-IKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC----L 152
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
H + ++ G D V Y TL+ LC G+ + A+++L ++ K ++
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
I C D +++ A L +E + R ++ +YSA+ G++ + + ++M
Sbjct: 213 YSTIIDSMCKD-KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
++ P + + + A K+G V EA + M +G P + YN L+ G C
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG-IKPDIVTYNSLMDGYCLVNE 330
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+A L MS + G A +Y I+++G C+ +A ++ +EM + +P V TYN
Sbjct: 331 VNMAKSILNTMSHR-GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
LI GLC G+ A+ ++ M + + PDI +SS++ ++C N
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 179/392 (45%), Gaps = 16/392 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFK----NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ T I + G+ A+ L + L Q + V ++ T++ M K+ + A L+
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYS----TIIDSMCKDKNVNDAFDLY 233
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ S I + + L+ C + A+ +F +M + PD +++IL+ C
Sbjct: 234 -SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ R+ EA + L M ++G DIV Y +L+ C ++ A IL + +G+ A
Sbjct: 293 EGRVKEAKNGLAMMM----KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
R + I + + ++ A L E + P++ +Y+++ L GRI ++
Sbjct: 349 -TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+D M +G P ++ Y + L AL K+ +VD+A+ ++ + +G P + Y IL+ GLC
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG-IRPNMYTYTILIDGLC 466
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + + + G TY +++ G C G F EA +L +M S P
Sbjct: 467 KGGRLEDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
TY ++I L + +A L EMI++ L
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 197/439 (44%), Gaps = 12/439 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++G L +S + + +M+ + F I + + G + A S+ +
Sbjct: 73 FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T + NT +K + ++ A + F S L++ LC+ +
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQA-LNFHDKLVALGFHLDQVSYGTLINGLCKVGET 191
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + + +D + D Y ++ +C D+ +N+A + ++ + + +IV
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA----FDLYSEMVSRRISSNIVT 247
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C GK++DA+ + K+ + + + + C +G ++ AK+ +
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR-VKEAKNGLAMM 306
Query: 288 LIRGGIPSLASYSAM--AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P + +Y+++ L NE + + +L+ M +G ++ Y + K
Sbjct: 307 MKQGIKPDIVTYNSLMDGYCLVNEVNMAKS--ILNTMSHRGVTATVRSYNIVINGFCKIK 364
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
MVD+A+++ +E K F P V YN L+ GLC +G + A+ + M + G + T
Sbjct: 365 MVDQAMKLFKEMHHKQIF-PNVITYNSLIDGLCKSGRISYALELIDLMHDR-GQQPDIIT 422
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++D LC++ +A +L ++ + P + TY +LI GLC G+ +A E+++
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 466 SQAKLPDISVWSSLVASVC 484
+ ++ ++ ++ C
Sbjct: 483 VKGYNLTVNTYTVMIQGFC 501
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 200/482 (41%), Gaps = 67/482 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y+++I + + + + ++ +M ++ I + G+L +A+ LF +
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE---------------------------------- 132
+ N +FN L+ KE +++
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331
Query: 133 --AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
A IL S G V + ++S N++++ C+ + D A+ +F+EM + +P+ +Y+
Sbjct: 332 NMAKSILNTMSHRG--VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC R++ A L+ M +G DI+ Y ++L ALC + A+ +L K
Sbjct: 390 SLIDGLCKSGRISYALELIDLM----HDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +G++ P + I + G +E A+++ + L++G ++ +Y+ M + G
Sbjct: 446 LKDQGIR-PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHG 504
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
E +L +M+ P + YE + +LF D+A +++ E + +G +Y
Sbjct: 505 LFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL------LY 558
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG--------ILVDGLCRDGRFLEA 422
+ L G A +L S Q C ++ E+ I D + +
Sbjct: 559 SFLEYGSWSLSFMAAPAHFLNNDSLQ--CTSSQESGNWAKLLLERIYCDCVLTKSNMRDK 616
Query: 423 SRVLEEMLIRS--------YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++I S Y V TY V+I+G CS G E++ L +M +PD
Sbjct: 617 DVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAV 676
Query: 475 VW 476
+
Sbjct: 677 TY 678
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 174/402 (43%), Gaps = 18/402 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + R+ E K + M + + + + Y ++N A S+ +S
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+S+N ++ K ++ A LF + + ++ + + N L+D LC+ R A
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLF-KEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L + M +G PD +Y ++ LC + +++A LL ++ +G ++ Y
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL----IKLKDQGIRPNMYTYTI 460
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ LC G+++DA I E +L KG + + C+ G + A SL+++
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL-FDEALSLLSKMKDN 519
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA---KLAALFKDGMV 347
IP +Y + L+++ + +K+L EM T+G S + Y + A +
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLN 579
Query: 348 DEALEVIEEEMVKGTFVPTV--RVYN--ILLKGLC---DAGNSAVAVMYLKKMSKQVGCV 400
+++L+ + G + + R+Y +L K D +V + SKQ G +
Sbjct: 580 NDSLQCTSSQE-SGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQ-GYI 637
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+ TY +++ G C G F E+ +L +M + P TY+
Sbjct: 638 LDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 225/488 (46%), Gaps = 44/488 (9%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFK 104
P Y ++I L+ + R+ + + + S ++ +IR YARAG+L +AV F+
Sbjct: 15 PAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFE 74
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ F C ++N ++ +V + + AH +++R V + + + + C
Sbjct: 75 RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAG-VSPDLHTHTIRLRSFCLT 133
Query: 165 RRSDLALHVFQEMDFQGC-------------------------------YPDRESYHILM 193
R +AL + + + +G +P+ +++ ++
Sbjct: 134 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 193
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
LC + EA LL ++ Q+G ++ Y + LC+ G++ +A+++++ +
Sbjct: 194 HALCKRGDVLEAGLLL----GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-- 247
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ P + + + A + + +G +P +Y+ + ID Y + +V
Sbjct: 248 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI-IDGYCKISMV 306
Query: 314 -EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++L + KGF P V Y + + L +G V+ ALE+ E KG P + VYN
Sbjct: 307 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG-IKPDIVVYNS 365
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+KGLC G A+ + +M+++ GC + +TY I+++GLC+ G +A+ V+ + +++
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 424
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
Y P V T+N LI G C K A+ +E M PD ++S++ + C +N
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL-CKAGKVNE 483
Query: 493 CRKTLEQL 500
+T +++
Sbjct: 484 VNETFQEM 491
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 184/398 (46%), Gaps = 19/398 (4%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G ++A LF + + +FN +L + K + A +L +V R S
Sbjct: 165 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL------GKVIQRGMS 218
Query: 154 LNLL-----MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+NL + LC+ R A+ + M PD +Y+ L++GLC EA H
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 277
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
L R+ +G D Y T++ C +Q+A ++L+ + KG + +
Sbjct: 278 LR----RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C +G D+E A L NEA +G P + Y+++ L +G I+ +V++EM +G
Sbjct: 334 GLCAEG-DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y + L K G + +A V+ + ++KG ++P V +N L+ G C A+
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSALQ 451
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+++M + G + TY +++GLC+ G+ E + +EM+++ P TYN+LI
Sbjct: 452 LVERM-WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C K EA + +M + PD +++L+ C N
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 548
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 48/437 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGW 145
IR AG+L EAV L + + V ++NTL++ + K+S EA H +LR
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMH--YLRRMMNQ 284
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ N ++D C+ A + ++ F+G PD+ +Y L+ GLC + + A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L F KG DIV+Y +L+ LC QG I A+Q++ ++ +G P + +
Sbjct: 345 LEL----FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-PDIQTYN 399
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRT 324
I + +I A ++N+A+++G +P + +++ + ID Y ++ ++++ M
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL-IDGYCKRLKLDSALQLVERMWE 458
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P + Y + L L K G V+E E +E ++KG P YNIL++ C +
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH-PNPITYNILIENFCRSNKME 517
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF---------LE-------------- 421
A + KMS++ G + ++ L+ G CR+G LE
Sbjct: 518 EASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTL 576
Query: 422 ------------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
A ++ +EML + + TY VLI G C A M L EMI +
Sbjct: 577 IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 636
Query: 470 LPDISVWSSLVASVCCN 486
+P +S + ++ S+ N
Sbjct: 637 IPSMSTFGRVINSLTVN 653
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 193/446 (43%), Gaps = 20/446 (4%)
Query: 43 HNGPV-YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
H G V Y +++ L + +++ DQM + F + + G + EA
Sbjct: 148 HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 207
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + Q ++N ++ + + +L A + + + V + + N L+ L
Sbjct: 208 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPD-VVTYNTLIRGL 265
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ A+H + M QGC PD +Y+ ++ G C + EAT LL + KG
Sbjct: 266 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF----KGF 321
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y +L+ LC +G ++ A+++ + KG+K + + C G I A
Sbjct: 322 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL-ILHAL 380
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++NE G P + +Y+ + L G I + V+++ KG+ P + + +
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG-----NSAVAVMYLKKMSKQ 396
K +D AL+++E M + P YN +L GLC AG N M LK
Sbjct: 441 CKRLKLDSALQLVER-MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK----- 494
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N TY IL++ CR + EAS+V+ +M P ++N LI G C G
Sbjct: 495 -GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553
Query: 457 AVMWLEEMISQAKLPDISVWSSLVAS 482
A + +++ + +++L+ +
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGA 579
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 188/427 (44%), Gaps = 8/427 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + + E + +M C D + T I Y + + EA L K+
Sbjct: 257 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 316
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V ++ +L+ + E +E A LF +K I N L+ LC
Sbjct: 317 VFKGFVPDQVTYCSLINGLCAEGDVERALELF-NEAQAKGIKPDIVVYNSLVKGLCLQGL 375
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V EM +GC+PD ++Y+I++ GLC +++AT ++ KG D+
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI----MKGYLPDVF 431
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ C + K+ A+Q++E++ G+ AP + + L + E
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+++G P+ +Y+ + + ++ E KV+ +M +G P V + + ++G
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + ++ KG + T +N L+ N +A +M + G A+ TY
Sbjct: 551 LEGAYLLFQKLEEKG-YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTY 608
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+DG C+ A L EM+ + + P + T+ +I L + ++AV + M+
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 668
Query: 467 QAKLPDI 473
+P++
Sbjct: 669 IGVVPEV 675
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 224/488 (45%), Gaps = 44/488 (9%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFK 104
P Y ++I L+ + R+ + + + S ++ +IR YARAG+L +AV F+
Sbjct: 16 PAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFE 75
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ F C ++N ++ +V + + AH +++R V + + + + C
Sbjct: 76 RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAG-VSPDLHTHTIRLRSFCLT 134
Query: 165 RRSDLAL-------------------------------HVFQEMDFQGCYPDRESYHILM 193
R +AL +F +M +P+ +++ ++
Sbjct: 135 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 194
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
LC + EA LL ++ Q+G ++ Y + LC+ G++ +A+++++ +
Sbjct: 195 HALCKRGDVLEAGLLL----GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-- 248
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ P + + + A + + +G +P +Y+ + ID Y + +V
Sbjct: 249 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI-IDGYCKISMV 307
Query: 314 -EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++L + KGF P V Y + + L +G V+ ALE+ E KG P + VYN
Sbjct: 308 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG-IKPDIVVYNS 366
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+KGLC G A+ + +M+++ GC + +TY I+++GLC+ G +A+ V+ + +++
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 425
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
Y P V T+N LI G C K A+ +E M PD ++S++ + C +N
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL-CKAGKVNE 484
Query: 493 CRKTLEQL 500
+T +++
Sbjct: 485 VNETFQEM 492
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 184/398 (46%), Gaps = 19/398 (4%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G ++A LF + + +FN +L + K + A +L +V R S
Sbjct: 166 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL------GKVIQRGMS 219
Query: 154 LNLL-----MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+NL + LC+ R A+ + M PD +Y+ L++GLC EA H
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 278
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
L R+ +G D Y T++ C +Q+A ++L+ + KG + +
Sbjct: 279 LR----RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C +G D+E A L NEA +G P + Y+++ L +G I+ +V++EM +G
Sbjct: 335 GLCAEG-DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y + L K G + +A V+ + ++KG ++P V +N L+ G C A+
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSALQ 452
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+++M + G + TY +++GLC+ G+ E + +EM+++ P TYN+LI
Sbjct: 453 LVERM-WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C K EA + +M + PD +++L+ C N
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 549
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 48/437 (10%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGW 145
IR AG+L EAV L + + V ++NTL++ + K+S EA H +LR
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMH--YLRRMMNQ 285
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ N ++D C+ A + ++ F+G PD+ +Y L+ GLC + + A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L F KG DIV+Y +L+ LC QG I A+Q++ ++ +G P + +
Sbjct: 346 LEL----FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-PDIQTYN 400
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRT 324
I + +I A ++N+A+++G +P + +++ + ID Y ++ ++++ M
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL-IDGYCKRLKLDSALQLVERMWE 459
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P + Y + L L K G V+E E +E ++KG P YNIL++ C +
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH-PNPITYNILIENFCRSNKME 518
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF---------LE-------------- 421
A + KMS++ G + ++ L+ G CR+G LE
Sbjct: 519 EASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTL 577
Query: 422 ------------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
A ++ +EML + + TY VLI G C A M L EMI +
Sbjct: 578 IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 637
Query: 470 LPDISVWSSLVASVCCN 486
+P +S + ++ S+ N
Sbjct: 638 IPSMSTFGRVINSLTVN 654
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 193/446 (43%), Gaps = 20/446 (4%)
Query: 43 HNGPV-YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
H G V Y +++ L + +++ DQM + F + + G + EA
Sbjct: 149 HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL 208
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + Q ++N ++ + + +L A + + + V + + N L+ L
Sbjct: 209 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPD-VVTYNTLIRGL 266
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ A+H + M QGC PD +Y+ ++ G C + EAT LL + KG
Sbjct: 267 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF----KGF 322
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y +L+ LC +G ++ A+++ + KG+K + + C G I A
Sbjct: 323 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL-ILHAL 381
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++NE G P + +Y+ + L G I + V+++ KG+ P + + +
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG-----NSAVAVMYLKKMSKQ 396
K +D AL+++E M + P YN +L GLC AG N M LK
Sbjct: 442 CKRLKLDSALQLVER-MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK----- 495
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N TY IL++ CR + EAS+V+ +M P ++N LI G C G
Sbjct: 496 -GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554
Query: 457 AVMWLEEMISQAKLPDISVWSSLVAS 482
A + +++ + +++L+ +
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGA 580
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 188/427 (44%), Gaps = 8/427 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + + E + +M C D + T I Y + + EA L K+
Sbjct: 258 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 317
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V ++ +L+ + E +E A LF +K I N L+ LC
Sbjct: 318 VFKGFVPDQVTYCSLINGLCAEGDVERALELF-NEAQAKGIKPDIVVYNSLVKGLCLQGL 376
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL V EM +GC+PD ++Y+I++ GLC +++AT ++ KG D+
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI----MKGYLPDVF 432
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ TL+ C + K+ A+Q++E++ G+ AP + + L + E
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+++G P+ +Y+ + + ++ E KV+ +M +G P V + + ++G
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + ++ KG + T +N L+ N +A +M + G A+ TY
Sbjct: 552 LEGAYLLFQKLEEKG-YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTY 609
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+DG C+ A L EM+ + + P + T+ +I L + ++AV + M+
Sbjct: 610 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 669
Query: 467 QAKLPDI 473
+P++
Sbjct: 670 IGVVPEV 676
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 196/412 (47%), Gaps = 21/412 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+T+ T+ +++AVSLF L Q N FN +L +VK +L+L
Sbjct: 31 FSTS-TTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHT--VLYLSQK 87
Query: 143 YGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ +K + + N+L++ CQ A V ++ G P+ + + L+KGLC + +
Sbjct: 88 MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147
Query: 202 LNEATHLL------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+++ ++ +F ++ + D+ + L+ C +G++++A +L ++ +G
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Query: 256 LKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+K + + DG + + AKS+ N G P + SYS +
Sbjct: 208 IKPGVVTYNSL-----MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ E ++L EM K P++V Y + + L K G + AL++++E +G P + Y+
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQ-PPNIVTYS 321
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+L LC A+ L +M Q G N TY IL+ GLC+ G+ +A +V E++L+
Sbjct: 322 SILDALCKNHQVDNAIALLTQMKNQ-GIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLV 380
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + V TY V+I+G C G EA+ L +M +P+ + ++ S+
Sbjct: 381 KGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 174/403 (43%), Gaps = 57/403 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRI 151
G+L +AV LF + N +F L+ KE ++ EA ++L + G +K +
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG--IKPGV 212
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N LMD ++ + A +F M G PD +SY IL+ G C + ++EA LL
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKE 272
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M K ++V Y +L+ LC GKI A++
Sbjct: 273 M----HHKQIIPNVVTYSSLIDGLCKSGKISYALK------------------------- 303
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
L++E RG P++ +YS++ L ++ +L +M+ +G P++
Sbjct: 304 -----------LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y + L + G +++A +V E+ +VKG + V Y ++++G CD G A+ L
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL-NVYTYTVMIQGFCDKGLFDEALTLLS 411
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
KM GC+ N +TY I++ L + A ++L EM+ ++ V N LI +
Sbjct: 412 KMEDN-GCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVT 470
Query: 452 G----------KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G KQ +A M+ LP V S A C
Sbjct: 471 GSSPGNSLLCKKQGKAAYNTPIMV--GPLPGPCVCGSFSAPGC 511
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 36/321 (11%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+ +F + Q P ++ ++ L + + +L M +R G ++V
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFR----GIKPNLVN 99
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
L+ + C G I A +L KIL+ G K + + C +G+ + ++
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK-------IHDKH 152
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
I G + A+DL+N+ M + P + + + K+G V
Sbjct: 153 CIVGKLKD-------AVDLFNK------------MILENINPDVYTFTILVDGFCKEGRV 193
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKG--LCDAGNSAVAVMYLKKMSKQVGCVANGET 405
EA V+ M++G P V YN L+ G L N A ++ Q+G + ++
Sbjct: 194 KEAKNVLAMMMIQG-IKPGVVTYNSLMDGYFLVKQVNKAKSIF---NTMAQLGVSPDIQS 249
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y IL++G C+ EA +L+EM + P V TY+ LI GLC GK A+ ++EM
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMH 309
Query: 466 SQAKLPDISVWSSLVASVCCN 486
+ + P+I +SS++ ++C N
Sbjct: 310 DRGQPPNIVTYSSILDALCKN 330
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 28 LKIFKEAKEKYPNYRH-----NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
+K+ EA E H N Y+S+I L +S +I+ +++D+M
Sbjct: 260 IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVT 319
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---L 139
+++ + + Q++ A++L + ++ L+K + + KLE A +F L
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLL 379
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ V + +++ C D AL + +M+ GC P+ ++Y I++ L
Sbjct: 380 VKGHNLNV----YTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/563 (23%), Positives = 237/563 (42%), Gaps = 93/563 (16%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L ++++I+ K + ++ F K P Y+HN + SM+ L +R+ + I
Sbjct: 115 LKAHHVAEIVAVHKDTESVIQFFYWIS-KRPFYKHNMNCFISMLNRLVR-DRVFAPADHI 172
Query: 69 DQMKGDSCECKDSV-----FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ------- 116
+ +C ++ + F I L +L L++F V +
Sbjct: 173 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 232
Query: 117 ---------SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+FNTL+ + K+ K+ A L L + +++ + + L+ C+ R
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAE-LILSQIFQYDLSPDVFTYTSLILGHCRNRNL 291
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-------------- 213
DLA VF M +GC P+ +Y L+ GLCN+ R++EA +L M
Sbjct: 292 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351
Query: 214 -----------------WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R+ ++G ++ Y L+ L GK++ A+ + K+L++GL
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Query: 257 KAPKSRRHRI---DLC-------------------------PCND-------GEDIEGAK 281
P + + +LC N+ G DIE A
Sbjct: 412 -VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 470
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L + L G +P++ +Y+ + +G + ++LD M+ G P Y ++
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 530
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++ A +EMV+ P Y L+ G G +A+ L++M +++GC
Sbjct: 531 SKWGKLESA-SFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM-EEMGCNP 588
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N E+Y +++GL ++ RF EA ++ ++M + P V TY LI GLC G+ A
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+M + LP++ +SSL+ +C
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGLC 671
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 183/427 (42%), Gaps = 67/427 (15%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I Y G +N A L + + C ++N L+ K KLE+A F +
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF-QE 545
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ S L+D + + D+AL + + M+ GC P+ ESY+ ++ GL + R
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA + M +++G +++ Y TL+ LC G+ Q A +I
Sbjct: 606 FSEAEKICDKM----AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH------------ 649
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
D+E K L P+L +YS++ L EG+ E + +L E
Sbjct: 650 --------------DMEKRKCL----------PNLYTYSSLIYGLCQEGKADEAEILLKE 685
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL---C 378
M KG P V + + + G +D A ++ MV P R Y++LLKGL C
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR-MVDVGCKPNYRTYSVLLKGLQKEC 744
Query: 379 DAGNSAVAVMY---------------------LKKMSKQVGCVANGETYGILVDGLCRDG 417
VAV + L +MS ++GC +TY LV GLCR G
Sbjct: 745 LLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS-EIGCEPTLDTYSTLVSGLCRKG 803
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
RF EA +++++M R + P E Y L+ C + A+ + ++ +S++
Sbjct: 804 RFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 863
Query: 478 SLVASVC 484
+L+ ++C
Sbjct: 864 ALICALC 870
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 185/399 (46%), Gaps = 32/399 (8%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ T I +++ G+++ A+SL + + + C +S+N ++ + KE++ A + +
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + I + L+D LC+ R+ A +F +M+ + C P+ +Y L+ GLC + +
Sbjct: 618 EQGLLPNVI-TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA LL M +KG D V + +L+ G+I A +L +++ G K P R
Sbjct: 677 DEAEILLKEM----ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK-PNYR 731
Query: 263 RHRI------------------------DLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ + P + E +L+ G P+L +
Sbjct: 732 TYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDT 791
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
YS + L +GR E ++++ +M+ +GF P +Y + L A K+ VD AL++
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG F + +Y L+ LC AG A M ++ A+ + +LVDGL ++G
Sbjct: 852 AKG-FQLHLSIYRALICALCKAGQVEEAQALFDNMLEK-EWNADEIVWTVLVDGLLKEGE 909
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
++L M +++ P ++TY +L R L IGK E+
Sbjct: 910 LDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 195/437 (44%), Gaps = 8/437 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+++I L R+ E +++++M E + I EA+ L
Sbjct: 309 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C Q++ L+ + + KLE A L+ + V + + + N L++ LC
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCV 427
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R AL +F M+ G + ++Y+ ++KGLC + +A L F ++ + G
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL----FEKMLKMGPLP 483
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y TL+ +G + +A ++L+ + G + P + + + +E A
Sbjct: 484 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFY 542
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E + G P+ SY+ + +G++ +L+ M G P++ Y A + L K
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ EA E I ++M + +P V Y L+ GLC G + A M K+ C+ N
Sbjct: 603 ENRFSEA-EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNL 660
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ GLC++G+ EA +L+EM + P T+ LI G +G+ A + L
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720
Query: 464 MISQAKLPDISVWSSLV 480
M+ P+ +S L+
Sbjct: 721 MVDVGCKPNYRTYSVLL 737
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 201/479 (41%), Gaps = 67/479 (13%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++ +MK C + I +R G+L A+ L+ + + V T ++N L+ E+
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ A +F G + Q+ N ++ LC + A+ +F++M G P
Sbjct: 427 VGGRFSTALKIF-HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ G +N A LL M + G D Y L+ GK++ A
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLM----KENGCEPDEWTYNELVSGFSKWGKLESASF 541
Query: 247 ILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++++ GL P S ID DG+ ++ A SL+ G P++ SY+A+
Sbjct: 542 YFQEMVECGLNPNPVSYTTLID-GHSKDGK-VDIALSLLERMEEMGCNPNVESYNAVING 599
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L E R E +K+ D+M +G P+++ Y + L ++G A ++ + M K +P
Sbjct: 600 LSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD-MEKRKCLP 658
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ----------------------------- 396
+ Y+ L+ GLC G + A + LK+M ++
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718
Query: 397 -----VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP--------------- 436
VGC N TY +L+ GL ++ LE ++ + S+ P
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLA 778
Query: 437 ---------CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++TY+ L+ GLC G+ YEA +++M + PD ++ SL+ + C N
Sbjct: 779 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 837
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 183/406 (45%), Gaps = 17/406 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILF 138
F T + + +AG L ++ + + N ++N L+ K K+E A H
Sbjct: 277 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 336
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
RS G+ V S N L++ C+ D A V EM G YP +Y+I + LC+
Sbjct: 337 RRS--GFAVTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 392
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
R+++A LL SM + D+V Y TL+ GK +A + + LR G
Sbjct: 393 FGRIDDARELLSSM--------AAPDVVSYNTLMHGYIKMGKFVEASLLFDD-LRAGDIH 443
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + + + ++EGA+ L E + P + +Y+ + G + +V
Sbjct: 444 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 503
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DEM KG P Y + + G D+A + EE + P + +YN+ + GLC
Sbjct: 504 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 563
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
GN A+ + +K+ + VG V + TY ++ G +G+F A + +EML + +P V
Sbjct: 564 KVGNLVKAIEFQRKIFR-VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 622
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY VLI G G+ +A + EM + P++ ++L+ +C
Sbjct: 623 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 668
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK++RKG P R I L D + A ++ + G +P++ +++ M +
Sbjct: 228 FEKMIRKGF-LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 286
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV-------------- 353
G + DK+ EM+ + S V Y + K+G ++EA
Sbjct: 287 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 346
Query: 354 --------------------IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ +EM+ PT YNI + LCD G A L M
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ + +Y L+ G + G+F+EAS + +++ P + TYN LI GLC G
Sbjct: 407 A-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 461
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A EEM +Q PD+ +++LV N
Sbjct: 462 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 494
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 194/437 (44%), Gaps = 17/437 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ +L +S + + V + M F T + + +AG L ++ + + N
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ K K+E A H RS G+ V S N L++ C+
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS--GFAVTP--YSFNPLIEGYCKQGLF 324
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A V EM G YP +Y+I + LC+ R+++A LL SM + D+V
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--------AAPDVVS 376
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ GK +A + + LR G P + + + ++EGA+ L E
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDD-LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P + +Y+ + G + +V DEM KG P Y + + G
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A + EE + P + +YN+ + GLC GN A+ + +K+ + VG V + TY
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR-VGLVPDHVTYT 554
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ G +G+F A + +EML + +P V TY VLI G G+ +A + EM +
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 468 AKLPDISVWSSLVASVC 484
P++ ++L+ +C
Sbjct: 615 GVRPNVMTHNALLYGMC 631
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK++RKG P R I L D + A ++ + G +P++ +++ M +
Sbjct: 191 FEKMIRKGF-LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV-------------- 353
G + DK+ EM+ + S V Y + K+G ++EA
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 354 --------------------IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ +EM+ PT YNI + LCD G A L M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ + +Y L+ G + G+F+EAS + +++ P + TYN LI GLC G
Sbjct: 370 A-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A EEM +Q PD+ +++LV N
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 179/370 (48%), Gaps = 8/370 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T F+ L++ V+ + E ++ +R + +I++L+ +++ L + R+ +ALH+F
Sbjct: 145 TLGFDLLIQTYVQNRR-ELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
E+ G PD Y +++ LC + A ++ R+ G + Y +
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI----GRMESSGCDLSVATYNVFIRG 259
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC ++ +A++I + KGL+A + L C E+ E + ++NE + G +P
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV-EEFEAGEEMMNEMIEFGFVP 318
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S A+ S + L +G I ++++++ G PSL +Y A + ++ KDG +DEA +
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
KG F P Y+IL+ C G VA+ +L KM+ +VG A Y L+ G C
Sbjct: 379 NNMGHKGLF-PNDVTYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYPYSSLISGHC 436
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ G+ A + +EM+ P V Y LI G C G+ + A EM + P+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496
Query: 475 VWSSLVASVC 484
+++L++ +C
Sbjct: 497 TFTALISGLC 506
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 209/463 (45%), Gaps = 20/463 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E R + VY +++ L E +EVI +M+ C+ + +
Sbjct: 199 ALHLFDEIVSS--GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
IR + ++ EAV + KNL + + ++ TL+ + K + EA +
Sbjct: 257 IRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V S NL+ D L + A + ++ G P Y+ L+ +C D +L+EA
Sbjct: 316 FVPSEAAVSNLV-DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
S+F + KG + V Y L+ + C +GK+ A+ L K+ G+KA
Sbjct: 375 E----SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ + AKSL +E + G P++ Y+++ EG + ++ EM K
Sbjct: 431 LISGHCKLGK-LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ + A ++ L + EA ++ EMV+ +P YN+L++G C GN+
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLF-GEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--------IRSYWPC 437
A L +M ++ G V + TY L+ GLC GR EA + ++ I P
Sbjct: 549 AFELLDEMVEK-GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN 607
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V TY LI GLC IG +A + EM++ LP+ + ++ +
Sbjct: 608 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 213/474 (44%), Gaps = 28/474 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++I + + ++ E + + + M D ++ I ++ + G+L+ A+ +
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ +++L+ K KL AA LF +K + L+ C+
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLF-DEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSGEDI 225
A ++ EM +G P+ ++ L+ GLC+ R+ EA L M W + +
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP-----NE 530
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDG---------E 275
V Y L+ C +G A ++L++++ KGL P + +R + C+ G
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGL-VPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
D++G + +NE I G +P++ +Y+A+ L G + + + + EM P+ Y
Sbjct: 590 DLQGEQQKLNE--IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
L L +G +++A++ + + +++G TV YNIL++G C G A L M
Sbjct: 648 CFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMID 705
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + +Y ++ CR G EA ++ E ML R P YN LI G C G+
Sbjct: 706 S-GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC-----CNTADLNVCRKTLEQLSSCS 504
+A ++M+ + P+ + ++SL+ C +TAD C+ L SCS
Sbjct: 765 KAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLNWCFLLSCS 818
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 206/450 (45%), Gaps = 18/450 (4%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++++ L + I ++++++K V+ I + + G+L+EA SLF N+
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+++ L+ K KL+ A + FL +K+ + + L+ C+ +
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVA-LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F EM G P+ Y L+ G C + L+ A L + M + KG + +
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM----TGKGISPNTYTF 498
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ LC ++ +A ++ +++ + + + + C +G + A L++E +
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR-AFELLDEMV 557
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR--------TKGFWPSLVMYEAKLAA 340
+G +P +Y + L + GR+ E + +++++ +G P++V Y A +
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G++D+A E++ EM+ +P Y L L GN A+ + + G +
Sbjct: 618 LCKIGLMDKA-ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE--GFL 674
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
AN TY IL+ G C+ GR EA+ VL M+ P +Y+ +I C G EA+
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 734
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADL 490
E M+++ PD ++ L+ CC T +L
Sbjct: 735 WESMLNRGVNPDTVAYNFLIYG-CCVTGEL 763
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 193/402 (48%), Gaps = 13/402 (3%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ IR + G+ +A + + L V ++N L+ K ++ +A L R
Sbjct: 149 TSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDR--- 205
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + N ++ LC + A+ V + CYPD +Y IL++ C + +
Sbjct: 206 -MSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVG 264
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A LL M KG D+V Y L+ +C +G++ +A++ L + G + P
Sbjct: 265 QAMKLLDEM----RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQ-PNVIT 319
Query: 264 HRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
H I L C+ G ++ A+ + E + +G PS+ +++ + L +G I VL++M
Sbjct: 320 HNIILRSMCSTGRWMD-AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P+ + Y L AL KD ++ A+E ++ + +G + P + YN LL LC G
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY-PDIVTYNTLLTALCKDGK 437
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VAV L ++ + GC TY ++DGL + G+ +A ++L+EM + P + TY+
Sbjct: 438 VDVAVEILNQLGSK-GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GL GK EA+ + ++ P+ ++S++ +C
Sbjct: 497 TLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 194/412 (47%), Gaps = 20/412 (4%)
Query: 74 DSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL- 131
DS D + + I Y + G++ A+ L +S V ++NT+L+ + KL
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDV---VTYNTILRTLCDSGKLK 229
Query: 132 EAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
EA +L R CY + + +L++ C+ A+ + EM +GC PD +
Sbjct: 230 EAMEVLDRQMQRECY-----PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVT 284
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y++L+ G+C + RL+EA L M G +++ + +L ++C G+ DA + L
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHM----PSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++RKG + + C G I A ++ + G P+ SY+ + L
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGL-IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ ++ + LD M ++G +P +V Y L AL KDG VD A+E++ + KG P +
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC-SPVLI 458
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL G + A+ L +M K G + TY LV GL R+G+ EA +
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEM-KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P TYN ++ GLC + A+ +L M+++ P + + L+
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 199/422 (47%), Gaps = 11/422 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ I +++D+M S + T +RT +G+L EA+ +
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ L++ KES + A L L K + + N+L++ +C+ R
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKL-LDEMRDKGCKPDVVTYNVLINGICKEGR 297
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ M GC P+ +++I+++ +C+ R +A L M +KG +V
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMI----RKGCSPSVV 353
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ LC +G I A+ +LEK+ + G P S + L + +E A ++
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGC-TPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG P + +Y+ + L +G++ ++L+++ +KG P L+ Y + L K G
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
D+A+++++E KG P + Y+ L+ GL G A+ + + +++G N TY
Sbjct: 473 TDDAIKLLDEMKGKG-LKPDIITYSTLVGGLSREGKVDEAIAFFHDL-EEMGVKPNAITY 530
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ GLC+ + + A L M+ R P +Y +LI GL G EA+ L E+ S
Sbjct: 531 NSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCS 590
Query: 467 QA 468
+
Sbjct: 591 RG 592
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 178/386 (46%), Gaps = 51/386 (13%)
Query: 119 NTLLKEMVKESKLEAAHILFLRS--CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
N L+ +V+ +LE FL C G ++ I +L+ LC+ ++ A V +
Sbjct: 114 NNHLRRLVRNGELEEG-FKFLEDMVCRG-DIPDIIACTSLIRG-LCKTGKTWKATRVMEI 170
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
++ G PD +Y++L+ G C + A LL M D+V Y T+L LC
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM-------SVSPDVVTYNTILRTLC 223
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
D GK+++AM++L++ ++ R P +
Sbjct: 224 DSGKLKEAMEVLDRQMQ------------------------------------RECYPDV 247
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + E + + K+LDEMR KG P +V Y + + K+G +DEA+ +
Sbjct: 248 ITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNH 307
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
G P V +NI+L+ +C G A +L +M ++ GC + T+ IL++ LCR
Sbjct: 308 MPSYGC-QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSVVTFNILINFLCRK 365
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G A VLE+M P +YN L+ LC K A+ +L+ M+S+ PDI +
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTY 425
Query: 477 SSLVASVCCNTADLNVCRKTLEQLSS 502
++L+ ++ C ++V + L QL S
Sbjct: 426 NTLLTAL-CKDGKVDVAVEILNQLGS 450
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I ++ G+ ++A+ L +
Sbjct: 424 TYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM 483
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+++TL+ + +E K++ A I F VK + N +M LC+ R+
Sbjct: 484 KGKGLKPDIITYSTLVGGLSREGKVDEA-IAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+ A+ M +GC P SY IL++GL + EA LL + R + +K S E +
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 226 VI 227
V+
Sbjct: 603 VV 604
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 203/477 (42%), Gaps = 20/477 (4%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L PT+LS ++ QK+ L +L+ F + + + + L E+ K
Sbjct: 124 FLDPTFLSHFVEHQKNALISLRFFHWLSSQ-SGFSPDSSSCNVLFDALVEAGACNAAKSF 182
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+D + K + IR + G + EA+S+F L ++N++L+ V+
Sbjct: 183 LDSTNFNP---KPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVR 239
Query: 128 ESKLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
A I F+ YG V+S + ++ L+ C R ++ + + G
Sbjct: 240 -----AGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVV 294
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P +++ L+ G C D+ + LL+SM R DI Y+ ++ LC GK +
Sbjct: 295 PRNAAFNKLISGFCKDKAYGRVSDLLHSMIAR----NRAPDIFTYQEVVNGLCKGGKGPE 350
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ + + +G AP + + + + A+ L E + +G +P+ +Y+AM
Sbjct: 351 GFRVFKDLKDRGY-APDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMI 409
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ G + E K+ EM KG+ V Y + L G + EA ++ EE KG
Sbjct: 410 HGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGIL 469
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+ YN L++G C G L ++ Q G + +Y L+D LC++G A
Sbjct: 470 RNHI-TYNALVRGFCKEGKIVEGANLLYELLDQ-GIQPSAASYAPLIDKLCQEGDMQNAK 527
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++M R P V T++ +I G C G E + WL M+ P + SL+
Sbjct: 528 ILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLI 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 153/370 (41%), Gaps = 46/370 (12%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ S N L +V+ AA FL S + SL + LC+ + A+ VF
Sbjct: 160 SSSCNVLFDALVEAGACNAAKS-FLDST---NFNPKPASLEAYIRCLCKGGLVEEAISVF 215
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++ G +++ +++G R++ ++ ++ + + D+ L+ A
Sbjct: 216 GQLKGIGVCASIATWNSVLRGSVRAGRID----FVWELYGEMVESSVVADVHTVGYLVQA 271
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
CD+ +I D +L ++L G+ + +++ C D + L++ + R P
Sbjct: 272 FCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKD-KAYGRVSDLLHSMIARNRAP 330
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y + L G+ EG +V +++ +G+ P VMY + L + + +A ++
Sbjct: 331 DIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLW 390
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E + KG F+P N TY ++ G
Sbjct: 391 FEMIQKG-FLP------------------------------------NEYTYNAMIHGYF 413
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ G EA ++ EM + Y +YNV+I+GLCS GK EA EEM + L +
Sbjct: 414 KIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHI 473
Query: 475 VWSSLVASVC 484
+++LV C
Sbjct: 474 TYNALVRGFC 483
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 199/411 (48%), Gaps = 23/411 (5%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH--- 135
D F + + ++R + LF ++ T ++N L++ + + + L A
Sbjct: 93 DRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYL 152
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L +RS GW + + N L+ C+ ++ D+A +F +M +G D SY L++G
Sbjct: 153 SLMVRS--GW--RPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEG 208
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R++EA L F + Q D+ + L+ LCD + ++ + +L+K+ G
Sbjct: 209 FCETGRVDEALEL----FRELEQP----DMYTHAALVKGLCDARRGEEGLYMLQKMKELG 260
Query: 256 LKAPKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ P +R + +DL C + + E A+ ++NE G +P + +A+ EGR+
Sbjct: 261 WR-PATRAYAALVDLW-CRE-QKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMS 317
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+V + M+ KG P++ Y A + G V +A+ ++++ M + P V YN+L
Sbjct: 318 GAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQ-MRECGVEPDVVTYNLL 376
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
++G C G+ A L+ M G A+ TY +L+D LC+ G+ EA + + + R
Sbjct: 377 IRGQCIDGHIESAFRLLRLMEGN-GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T+N +I GLC GK A +LE+M+S PD +S + ++C
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 20/359 (5%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+FN+L+ + +L+ A LF + + + S L++ C+ R D AL +F+E
Sbjct: 166 TFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAV-SYAALIEGFCETGRVDEALELFRE 224
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---FWRISQKGSGEDIVIYRTLLF 233
++ PD ++ L+KGLC+ RR E ++L M WR + + Y L+
Sbjct: 225 LE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRA-------YAALVD 273
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
C + K ++A ++L ++ GL + C +G + GA + ++G
Sbjct: 274 LWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR-MSGAVRVFESMKLKGCE 332
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+AM N G++ + +LD+MR G P +V Y + DG ++ A +
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392
Query: 354 IEEEMVKGTFVPTVR-VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ +++G + + YN+L+ LC G A + + G N T+ +++G
Sbjct: 393 LR--LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVING 449
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
LC+ G+F A LE+M+ P TY+ I LC E + +++EM+ + P
Sbjct: 450 LCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKP 508
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/448 (18%), Positives = 183/448 (40%), Gaps = 22/448 (4%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+++ R++ V + MK CE + ++ + G++ +A++L + +
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
++N L++ + +E+A L LR G + + + N+L+D LC+ + D
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRL-LRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F ++++G P+ +++ ++ GLC + + A L M G D Y
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV----SAGCAPDTYTY 478
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+ LC ++ + ++++L+K +K P + + I + + A + + +
Sbjct: 479 SPFIENLCKTKGSREGLSFIDEMLQKDVK-PSTVNYTIVIDRLFKERNYGLATRIWGQMV 537
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P + +Y+ NEGR+ E + V+ EM+ G + Y + G D
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597
Query: 349 EALEVIEEEMVKGTFVPTVRVY--------------NILLKGLCDAGNSAVA-VMYLKKM 393
A+ ++ + M +P + ++ LK +A V L ++
Sbjct: 598 HAVTIL-KHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFEL 656
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K+ ++ Y +++G + R E + ++ M + Y L+ C +
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRM 716
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVA 481
+A L MI LP++ + L++
Sbjct: 717 YPDAWALLCSMIGHGFLPNLISYQYLLS 744
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 173/423 (40%), Gaps = 30/423 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L ++ ++ E + D ++ F T I + G+ + A + + +
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C T +++ ++ + K +K + F+ +VK + +++D L + R
Sbjct: 467 VSAGCAPDTYTYSPFIENLCK-TKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LA ++ +M GC PD +Y ++ CN+ RL+EA +++ M + G D +
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEM----KKGGIIVDAM 581
Query: 227 IYRTLLFALCDQGKIQDAMQILEKI-------------LRKGLKAPKSRRHRIDLCPCND 273
Y TL+ GK A+ IL+ + + + + L +
Sbjct: 582 AYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSV 641
Query: 274 GEDIEGAKSL-INEALIRGGIPSLA-SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ IE A + E + + +PS A +Y A+ E R+ E ++ M+ +
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNE 701
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
+Y + + K M +A ++ M+ F+P + Y LL G G + A +
Sbjct: 702 DIYTSLVNCFCKLRMYPDAWALL-CSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760
Query: 392 KMS-KQVGCVANGETYGILVDGLCRDGRF---LEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ K+ + + I++DGL R G + +LE+M + P ETY +L
Sbjct: 761 GLRWKEYN--TDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCK---PSDETYAMLTEE 815
Query: 448 LCS 450
L +
Sbjct: 816 LST 818
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 205/460 (44%), Gaps = 15/460 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K++ E + P N Y M+ L + R E EV +M ++ + +
Sbjct: 247 AMKVW-EQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGIL 305
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I R+G ++ A ++ ++ + V +N+L+K + + A + G+
Sbjct: 306 IHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW--DSTGFS 363
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCNDRRLNEA 205
+I + N++ L A + ++++ C PD+ ++ L+ GLC + N A
Sbjct: 364 GIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRA 423
Query: 206 THLLYSMFWRISQKGSGE--DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+L + SGE D+ Y +++ C G+ DA ++ + +++ G K P S
Sbjct: 424 FEILED------ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK-PNSHV 476
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + I A + E G P++ +Y+ + L + E + EM
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+GF P + Y + + L +D VD AL + +E + G V V V+NIL+ GLC AG
Sbjct: 537 ERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV-DVMVHNILIHGLCSAGKV 595
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A +M K+ C N TY L+DG G +A+ + +L P + TYN
Sbjct: 596 DEAFCIYLEM-KEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
I+GLCS + E V+ L E+++ +P + WS LV +V
Sbjct: 655 RIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 223/544 (40%), Gaps = 77/544 (14%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN--RITEMKEVIDQM 71
L ++IK ++ P AL + P + P+ ++ L+ S+ + + ++ +M
Sbjct: 16 LLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPRM 75
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESK 130
+ +S + ++RA + A++ F++L S C +S NTLL V+ +
Sbjct: 76 RHRP-RFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARR 134
Query: 131 LEAAHILFL---RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
A F +G + +Q+ N+++ LC D A+ +F + +G PDR
Sbjct: 135 YSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRV 194
Query: 188 SYHILMKGLCNDRRLNEATHLL------------------------YSMF------WR-- 215
+Y LM GL +L+ A LL MF W
Sbjct: 195 TYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ G+ ++ Y+ +L LC G+ ++A ++ +++ +A + C G
Sbjct: 255 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG- 313
Query: 276 DIEGAKSLINE--------------ALIRG--------------------GIPSLASYSA 301
D++ A + ++ +LI+G GI + +Y+
Sbjct: 314 DVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNI 373
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGF-WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M L + G + E ++L ++ P V + + L ++G + A E++E+
Sbjct: 374 MTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G + V Y+ ++ C G + A K M K GC N Y L++G CR +
Sbjct: 434 GEEL-DVFSYSSMINRFCKDGRTHDANEVYKNMVKD-GCKPNSHVYNALINGFCRVSKIN 491
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A ++ EM P + TYN LI GLC K EA +EM+ + PDI ++SL+
Sbjct: 492 DAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLI 551
Query: 481 ASVC 484
+C
Sbjct: 552 RGLC 555
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 7/322 (2%)
Query: 168 DLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL F+++ GC P S++ L+ RR ++A S+ + ++
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L +LC +G + A+ + + R+G+ AP + + + ++ A L++E
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGV-APDRVTYSTLMSGLAKHDQLDNALDLLDE 218
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
G Y+A+ + G + KV +++ R G P+L Y+ L L K G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
EA EV M TV Y IL+ GLC +G+ A M K G V +
Sbjct: 279 RFKEAGEVWSRMMANNHQADTV-TYGILIHGLCRSGDVDSAARVYSDMVK-AGLVLDVSV 336
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+ G C GR EA + + + TYN++ +GL G EA L+++
Sbjct: 337 YNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLE 395
Query: 466 SQAKL-PDISVWSSLVASVCCN 486
+ A PD + +L+ +C N
Sbjct: 396 NDASCSPDKVTFGTLIHGLCEN 417
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 200/443 (45%), Gaps = 45/443 (10%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y+ ++ +++ V+ +M E ++ + Y +++EAV+L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + T +FNTL+ H LFL +
Sbjct: 174 VDQMVEMGYKPDTVTFNTLI------------HGLFLHN--------------------- 200
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
++ A+ + M +GC PD +Y ++ GLC ++ A LL M +KG
Sbjct: 201 ---KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-----EKGKI 252
Query: 223 E-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
E ++VIY T++ LC + DA + K+ KG+K + + C CN G A
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR-WSDAS 311
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+++ + R P++ +++++ EG+++E +K+ DEM + P++V Y + +
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+DEA ++ MV +P V YN L+KG C A + ++MS Q G V
Sbjct: 372 CMHDRLDEAQQIFTL-MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVG 429
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N TY L+ GL + G A ++ ++M+ P + TY++L+ GLC GK +A++
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E + P+I ++ ++ +C
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMC 512
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 205/435 (47%), Gaps = 14/435 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI+E ++DQM + F T I + +EAV+L +
Sbjct: 155 SSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVA 214
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + N ++D LC+ + D
Sbjct: 215 RGCQPDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMD 273
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F +M+ +G PD +Y+ L+ LCN R ++A+ LL M ++ ++V +
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 329
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+L+ A +GK+ +A ++ ++++++ + + + C + ++ A+ + +
Sbjct: 330 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEAQQIFTLMV 388
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ +P + +Y+ + R+ EG ++ EM +G + V Y + LF+ G D
Sbjct: 389 SKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 448
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A ++ ++ MV P + Y+ILL GLC G + V YL+K + N T
Sbjct: 449 MAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PNIYT 503
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V Y +I G C G + EA EM
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 466 SQAKLPDISVWSSLV 480
LPD +++L+
Sbjct: 564 EDGTLPDSGCYNTLI 578
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 168/368 (45%), Gaps = 16/368 (4%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQE 176
L + + E KL+ A LF G VKSR I + L+ + + + D+ + + ++
Sbjct: 52 LSRNGLSELKLDDAVALF-----GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G + +Y IL+ C +L A +L M + G DIV +LL C
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM----KLGYEPDIVTLSSLLNGYC 162
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+I +A+ ++++++ G K P + + A +LI+ + RG P L
Sbjct: 163 HGKRISEAVALVDQMVEMGYK-PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y + L G I +L +M ++V+Y + L K +D+A ++ +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
KG P V YN L+ LC+ G + A L M ++ N T+ L+D ++
Sbjct: 282 METKG-IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFNSLIDAFAKE 339
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G+ +EA ++ +EM+ RS P + TYN LI G C + EA M+S+ LPD+ +
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399
Query: 477 SSLVASVC 484
++L+ C
Sbjct: 400 NTLIKGFC 407
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 224/504 (44%), Gaps = 58/504 (11%)
Query: 24 PLTALKIFKEAKEKY--PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
P A +IFK+ K PN + S++ S S+ ++ +E + +
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVN 209
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F I Y + +AV + ++NC ++NT+L + K+ +L A L +
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM-- 267
Query: 142 CYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
++KSR + N+L+ C+ A +V + M PD +Y++L+ GL
Sbjct: 268 ----DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
CN+ R+ EA L M D+V Y TL+ + KI +A ++LE++ KG+
Sbjct: 324 CNEGRIEEAFKLRDEM----ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 257 KAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
K P + H I + C +G+ ++ A + I + G P +Y+ + G + E
Sbjct: 380 K-PNAVTHNIMVKWYCKEGK-MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Query: 316 DKVLDEM-----------------------------------RTKGFWPSLVMYEAKLAA 340
+ +DEM R +G++ V Y +
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
FKDG VD AL+ + +EM + +P+ YN ++ GLC G + A+ L ++ + G +
Sbjct: 498 YFKDGNVDRALK-LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLL 555
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++ G CR+G +A + +M+ S+ P V T N+L+RGLC G +A+
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKL 615
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+S+ K D +++L+ S+C
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLC 639
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 224/538 (41%), Gaps = 73/538 (13%)
Query: 6 PRLLTPTYLSQIIKKQ--KSPLTALKIFKEAKEKYPNYRHN------------------G 45
P+L P LS + K P + FK A+ P + HN
Sbjct: 46 PQLTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFS 105
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
+ ++G ++ ++R ++ I ++ S ++ TAI Y ++GQ + A +FK
Sbjct: 106 DAKSLLLGFIA-TDRRHDLHLSILRLTSPS----KALLDTAIGAYVQSGQPHHAFQIFKK 160
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVK----SRIQSLNLLMDV 160
+ + + NTLL +V + ++H + F R + +K + + N+++
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYG 217
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C + A+ M C PD +Y+ ++ LC RL +A LL M +G
Sbjct: 218 YCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDM----KSRG 273
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ Y L++ C G +++A ++E + + L + + CN+G IE A
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR-IEEA 332
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L +E +P + SY+ + +I E K+L+EM KG P+ V + +
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM------- 393
K+G +D+A I +M + F P YN L+ G C AGN A + +M
Sbjct: 393 YCKEGKMDDASNTI-TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 394 ---------------------------SKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+++ G + +YG L+ G +DG A ++
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM + P TYN +I GLC GK +A+ L E++ LPD + +++++ C
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 216/468 (46%), Gaps = 33/468 (7%)
Query: 31 FKEAKE------KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
FK+A E KY N + Y +++ L + R+ + ++++ MK + +
Sbjct: 224 FKDAVEFLNVMGKY-NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
+ Y + G L EA ++ + ++Q N + ++N L+ + E ++E A
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA---------- 332
Query: 145 WEVKSRIQSLNLLMDVLC---------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
++++ +++L LL DV+ + + A + +EM +G P+ +++I++K
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C + ++++A++ + M + G D V Y TL+ C G + +A + ++++ RK
Sbjct: 393 YCKEGKMDDASNTITKM----EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+K + I C + + +E A L++ A RG SY + + + +G +
Sbjct: 449 MKMDSVTLNTILRTLCRE-KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
K+ DEM+ K PS V Y + L + G ++A+ + E + G +P YN +L
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG-LLPDETTYNTILH 566
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G+ A + KM + + T IL+ GLC +G +A ++ + +
Sbjct: 567 GYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKA 625
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN LI LC G+ +A L EM + PD +++++ ++
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 172/431 (39%), Gaps = 40/431 (9%)
Query: 27 ALKIFKEAKEK--YPN-YRHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
A K+ +E EK PN HN V Y + SN IT+M+E G S +C
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE-----SGFSPDC--V 419
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-- 139
+ T I Y +AG + EA + + N + + NT+L+ + +E KLE A+ L
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 140 --RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R + EV S L+ + D AL ++ EM + P +Y+ ++ GLC
Sbjct: 480 RKRGYFIDEV-----SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +A L + + G D Y T+L C +G ++ A Q K++ K
Sbjct: 535 QCGKTEQAISKLNELL----ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C +G +E A L N + +G +Y+ + L EGR+ +
Sbjct: 591 PDVFTCNILLRGLCMEGM-LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L EM K P Y A + AL G + EA E + + + KG V
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV---------- 699
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ V VA Y + LC +G++ +A R+ E +
Sbjct: 700 LQLDXNETVVTSETSEESDSSSVA----YSEWIKELCTEGKYKDAMRIFGESKQKGITVD 755
Query: 438 VETYNVLIRGL 448
TY L+ GL
Sbjct: 756 KSTYINLMDGL 766
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 134/311 (43%), Gaps = 45/311 (14%)
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+L+ + DRR H L+ R++ + T + A G+ A QI +K
Sbjct: 110 LLLGFIATDRR-----HDLHLSILRLTSPSKA----LLDTAIGAYVQSGQPHHAFQIFKK 160
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ K R R +L CN +L+N +L+R S+S A + +
Sbjct: 161 M--------KRLRLRPNLLTCN---------TLLN-SLVRYPSSHSVSFSREAFNDAIKL 202
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
IV + +V+Y L FKD + E L V M K P Y
Sbjct: 203 GIVPNVNTFN----------IVIYGYCLENKFKDAV--EFLNV----MGKYNCSPDNVTY 246
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N +L LC G A L M K G + N TY ILV G C+ G EA+ V+E M
Sbjct: 247 NTILDALCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P V TYN+LI GLC+ G+ EA +EM + LPD+ +++L+ C + +
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING-CLEWSKI 364
Query: 491 NVCRKTLEQLS 501
+ K LE++S
Sbjct: 365 SEAFKLLEEMS 375
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 215/482 (44%), Gaps = 48/482 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKE-KYPNYRHNGPVYASMIGILSESNRITEM 64
P ++T T + K AL F++ +E PN R Y ++ L ++ ++
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNER----TYNVVVNGLCKARLTSKA 60
Query: 65 KEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
EV+ +M+ D V ++T I + + G+++ A + L+
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI-------------------LR 101
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
EMV + + + ++D LC+ + D A + +EM +G
Sbjct: 102 EMVTRDG----------------IAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVE 145
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD+ ++ L+ G CN R+++EA L + S K D+V Y L+ C G ++
Sbjct: 146 PDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK---PDVVTYTALIDGFCKSGNLEK 202
Query: 244 AMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
AM++L + +G K P + L D++ A L +G +P++ +Y+ +
Sbjct: 203 AMKMLG--VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 260
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L ++ ++DEM P V Y A L + G ++EA ++ +E M +
Sbjct: 261 IHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE-MATKS 319
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
+P Y L++G C+A A L+ M G + TY I+V G R RF+EA
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ ++EM+ R+ P TY+ LI GLC G+ A+ L+ M+++ P + ++S++ +
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439
Query: 483 VC 484
+C
Sbjct: 440 LC 441
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 190/437 (43%), Gaps = 48/437 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK++KE +++ + Y ++I +S + + +++ M+G C +++
Sbjct: 167 ALKLYKEILTS-SSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 225
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ +AG L++A+ LF+ ++ CV ++ TL+ + K++AA +L +
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL-MDEMTATC 284
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S N L+D C+ R + A +F+EM + C PDR +Y L++G CN RL EA
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEAR 344
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL +M + G D+V Y ++ A SR R
Sbjct: 345 FLLENM---KTAAGIDPDVVTYSIVV-------------------------AGYSRAKRF 376
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+E A+ I E + R P+ +YS++ L GR+ +VL M K
Sbjct: 377 ----------VEAAE-FIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR 425
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS+ + + + AL + G +DEA +++ G P + Y LL+G G +A
Sbjct: 426 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG-LEPGMVTYTTLLEGFSRTGRMEIA 484
Query: 387 VMYLKKMSKQVGC------VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ M K+ + + + L+ GLC+ +A V+EE+ R P E
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544
Query: 441 YNVLIRGLCSIGKQYEA 457
++ GL G+ EA
Sbjct: 545 CLAIVDGLLRAGRTEEA 561
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 192/436 (44%), Gaps = 21/436 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L ++ E++ +MK E F+ I + A +++EA+ L+K +
Sbjct: 115 TYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
Query: 107 SQFNCVNWTQ---SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+W ++ L+ K LE A + L G + + + + L+ LC+
Sbjct: 175 --LTSSSWKPDVVTYTALIDGFCKSGNLEKA-MKMLGVMEGRKCVPNVVTYSSLLHGLCK 231
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D AL +F+ M +GC P+ +Y L+ GLC +++ A L+ M +
Sbjct: 232 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM----TATCCPP 287
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V Y LL C G+I++A Q+ +++ K + + CN +E A+ L
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN-ASRLEEARFL 346
Query: 284 INEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ GI P + +YS + R VE + + EM + P+ V Y + + L
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G VD A+EV++ MV P+V +N ++ LC G+ A L M+ G
Sbjct: 407 KAGRVDHAMEVLKN-MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH-GLEPG 464
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV-------ETYNVLIRGLCSIGKQY 455
TY L++G R GR A + E M ++ + ++ LIRGLC +
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524
Query: 456 EAVMWLEEMISQAKLP 471
+A+ +EE+ S+ P
Sbjct: 525 KAMAVVEELRSRECEP 540
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N N Y+S+I L ++ R+ EV+ M E F + I R G ++EA
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRI----QS 153
L ++ ++ TLL+ + ++E A+ LF +R + Q+
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA 509
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ L+ LC+ R D A+ V +E+ + C P E ++ GL R EA L+ S+
Sbjct: 510 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 162/344 (47%), Gaps = 12/344 (3%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+K+ + N ++ LC +R+D A+ V + M GC PD SY I++K LC+D R +A
Sbjct: 39 LKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQA 98
Query: 206 THLLYSMFWRISQKGSG---EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
LL R+ K G D+V Y T++ +GKI A + +++++G P
Sbjct: 99 LDLL-----RMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGF-VPDVV 152
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
H + ++ A+ L+ + + G P+ +Y++M GR E K+ EM
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G P +V + + + +L K G EA E+ KG P + Y ILL G G
Sbjct: 213 TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKG-HRPNIVTYGILLHGYATEGC 271
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + + M K G VAN + IL+D + G EA +L EM + P V TY+
Sbjct: 272 FADMMSFFNTM-KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYS 330
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
LI LC +G+ +AV +MI P+ V+ SL+ C +
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTH 374
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 211/505 (41%), Gaps = 73/505 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
YA ++ L + NR + +++ M + C V + T I + + G++ +A +L+
Sbjct: 82 YAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHE 141
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---------------FLRSCYGWEVKSR 150
+ Q V + N+++ + K ++ A +L + +G+ R
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201
Query: 151 -------------------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
I S N MD LC+ RS A +F M +G P+ +Y I
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261
Query: 192 LMKGLCNDRRLNEATHLLYSM-------------------------------FWRISQKG 220
L+ G + + +M + +G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ Y TL+ ALC G++ DA+ +++ G++ H + C G D+ A
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHG-DLVKA 380
Query: 281 KSLINEALIRGGIP--SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
K L+ E ++ GIP ++A ++++ + EGR+++ + D ++ G ++M+ +
Sbjct: 381 KELVYE-MMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLI 439
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
G + +A V++ M+ P YN L+ G +G + ++MS +
Sbjct: 440 DGYCLVGEMGKAFSVLDA-MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK-K 497
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
TY I++DGL R GR + A ++L EM+ + TYN++++GLC EA+
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAI 557
Query: 459 MWLEEMISQAKLPDISVWSSLVASV 483
+ +++ + +I+ ++++ S+
Sbjct: 558 VMFQKLCTMNVKFNITTLNTMINSM 582
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 182/450 (40%), Gaps = 42/450 (9%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
S + L + R E E+ M + + YA G + +S F +
Sbjct: 226 SFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGD 285
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
V F L+ K ++ A +L L G + + + + L+ LC+ R
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEA-MLILSEMQGQGLSPDVFTYSTLISALCRMGRLAD 344
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ F +M G P+ YH L++G C L +A L+Y M ++ +I +
Sbjct: 345 AVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM---MNNGIPRPNIAFFN 401
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+++ ++C +G++ DA I + + G ++ + + C GE G + +A+I
Sbjct: 402 SIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE--MGKAFSVLDAMI 459
Query: 290 RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
GI P +Y+ + + GRI +G + EM K P+ V Y L LF+ G
Sbjct: 460 SAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTV 519
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG------------------------NSA 384
A +++ E + GT V ++ YNI+LKGLC N+
Sbjct: 520 AAQKMLHEMIGCGTTV-SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTM 578
Query: 385 VAVMYLKKMSKQV----------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+ MY + ++ G V N TYGI++ L ++G EA + M
Sbjct: 579 INSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
PC N IR L G+ +A ++ ++
Sbjct: 639 APCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 142/338 (42%), Gaps = 43/338 (12%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P +Y ++M G C RR L + F R+ + G D T+L LC + D
Sbjct: 6 PTIFTYGVVMNGCCRARR----PELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI--PSLASYSA 301
A+++L + + + P + + I L D + A L+ G+ P + +Y+
Sbjct: 62 AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + EG+I + + EM +GF P +V + + + AL K VD A E++ +MV
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNA-ELLLRQMVDN 180
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y ++ G G A ++M+ + G + + ++ +D LC+ GR E
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGR-GLIPDIVSWNSFMDSLCKHGRSKE 239
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCS------------------------------- 450
A+ + M + + P + TY +L+ G +
Sbjct: 240 AAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299
Query: 451 ----IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G EA++ L EM Q PD+ +S+L++++C
Sbjct: 300 AYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 20/468 (4%)
Query: 41 YRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECK-DSVFATAIRTYARAGQL 96
Y++ GP + +L E ++E ++++D++ DS A R + +
Sbjct: 183 YKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI 242
Query: 97 NEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
A+ +F ++W T S+N ++ + + K++ AH L ++ + + S +
Sbjct: 243 EMAIKVFCEYG----ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD-VVSYS 297
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++D C AL + +M +G P+R +Y+ ++ LC + EA +L M
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM--- 354
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+SQK D V+Y TL+ G ++ A + +++L K + +P + + G
Sbjct: 355 MSQKII-PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYITYTTLIQGFGQGG 412
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++L +E + RG P +Y+ + ID+Y G +V + +EM G P++V Y
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTL-IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
A + L K G +D A E+++E KG + V +YN ++ G+C AGN A+ +K+M
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQL-NVCIYNSMVNGICKAGNIEQAIKLMKEM- 529
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY ++D CR G +A ++L+EML R P V T+NVL+ G C +G
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ L M+ + +PD +++L+ C + +N K +++ +
Sbjct: 590 EDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS-MNTTTKIYKRMRN 636
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 227/527 (43%), Gaps = 55/527 (10%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+LS+I + A+K+F E + +N +Y+ L ++ E ++ QM
Sbjct: 231 FLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYS-----LCRLGKVKEAHRLLMQMD 285
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS---------QFNCV-----NWTQSF 118
S ++T I Y G+L +A+ L ++ +N + +SF
Sbjct: 286 FRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSF 345
Query: 119 NT--LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL----- 171
+L+EM+ + K+ ++++ +G+ +++ N D + + S +
Sbjct: 346 EAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404
Query: 172 --------------HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++F EM +G PD +Y L+ C + A +S+ +
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA----FSLHNEMV 460
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
Q G +IV Y L+ LC G++ A ++L+++ +KGL+ + + C G +I
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG-NI 519
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A L+ E + G P +Y+ + ID Y G I + K+L EM +G P++V +
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTV-IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ GM+++ ++ + KG VP YN L+K C + K+M Q
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKG-IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + TY IL+ G C+ EA + +EM+ + Y P V +YN LI+ K E
Sbjct: 638 -GVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTAD----LNVCRKTLEQ 499
A EEM + D +++ V +C D LN+C + +E+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVEITLNLCDEAIEK 742
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 18/288 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K TA ++ E ++K + N +Y SM+ + ++ I +
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M+ + + T I Y R G +++A L + + +FN L+
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
LE L GW ++ I + N LM C + +++ M QG
Sbjct: 584 CMLGMLEDGDRLL-----GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD +Y+IL+KG C R L EA L M +KG + Y L+ + K
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMI----EKGYVPTVTSYNALIKRFYKKRKF 694
Query: 242 QDAMQILEKILRKGLKAP-KSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+A ++ E++ GL A + +D+ C + D+E +L +EA+
Sbjct: 695 XEARELFEEMRGHGLVADGEIYNFFVDM--CYEEGDVEITLNLCDEAI 740
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 210/450 (46%), Gaps = 27/450 (6%)
Query: 42 RHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
H P + ++G L ++N + + + QM+ + + I Y++ GQ
Sbjct: 4 HHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQN 63
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ S+F N+ + + +F TL+K + + ++ A + F K S
Sbjct: 64 ALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKA-LHFHDKVVAQGFKLNQVSYGT 122
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ LC+ ++ AL + +D + PD Y+ ++ GLC D+ +N+A +++++ +
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDA----FNLYFEM 178
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
K +V Y TL+ LC +++DA+ +L K++ + + + C +G+
Sbjct: 179 VAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGK- 237
Query: 277 IEGAKSLINEALIRGGIPSLASYSAM------------AIDLYNE--GRIVEGDKVLDEM 322
++ AK++ + P++ +Y+++ A ++N + E + +EM
Sbjct: 238 MKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEM 297
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
K +P +V+Y + + L K G AL+ I E +G P + YN LL LC +
Sbjct: 298 HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQ-PPDIFTYNSLLDALCKNYH 356
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ L K+ Q G + TY IL++GLC+ GR +A +V E++L++ Y V TYN
Sbjct: 357 VDKAIELLTKLKDQ-GIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYN 415
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+I+G C G E + + +M PD
Sbjct: 416 AMIKGFCKKGLFDETLAMVSKMKDSGCSPD 445
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 157/346 (45%), Gaps = 25/346 (7%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++ L + + + + ++M+F G + + IL+ C + A L +S+F I
Sbjct: 18 ILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILIN--CYSQLGQNA--LSFSVFANI 73
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+KG G D + + TL+ LC +G+I A+ +K++ +G K + + C G+
Sbjct: 74 LKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQT 133
Query: 277 IEGAKSL--INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ L I+ L++ P + Y+ + L + + + + EM K PS+V Y
Sbjct: 134 RAALEFLRRIDGKLVQ---PDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTY 190
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ L + +A+ ++ + M+ PTV ++IL+ C G A M
Sbjct: 191 NTLICGLCIMAQLKDAIGLLHK-MILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249
Query: 395 KQVGCVANGETYGILVDG-----LCRDGRFL---------EASRVLEEMLIRSYWPCVET 440
K+ N TY L+DG + + + + EA + EEM + +P +
Sbjct: 250 KE-DVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVI 308
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
YN LI GLC G+ A+ ++ EM + + PDI ++SL+ ++C N
Sbjct: 309 YNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKN 354
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 203/446 (45%), Gaps = 44/446 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P+ ++P LS +++ Q P AL++F+ +R+ Y +I L S EM+
Sbjct: 4 PKPISPFRLSSLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 66 EVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ Q++ ++ K+ +F I Y RA + A+ F+++ +F C +S N+LL
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++ + E + S + + N+L++ C R A +VF EM + P
Sbjct: 124 LLNCKEFEKFDGIL--SGIDKFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCP 181
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ ++ L+ GLC D RL+EA+ L M + K + +Y +L+ LC ++ A
Sbjct: 182 NVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNA---FVYASLMKGLCRVNELSLA 238
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ L+K + A K R + GI YS +
Sbjct: 239 FE-----LKKEMVANKLR--------------------------LDSGI-----YSTLIA 262
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L+ GR E VL+EMR G P V Y A ++ + + A V+EE +VKG
Sbjct: 263 ALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGC-K 321
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V YN+++ GLC G A + M ++ GC + +Y IL DGLC +F EA+
Sbjct: 322 PDVISYNVIISGLCKEGKWREANDLFEDMPRR-GCTPDVGSYRILFDGLCEGMQFNEAAF 380
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCS 450
+L+EM+ + Y P + + LCS
Sbjct: 381 ILDEMVFKGYAPKSASXTKFVEALCS 406
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 154/361 (42%), Gaps = 59/361 (16%)
Query: 169 LALHVFQEMDFQGCYPDRE-------SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
LAL +FQ + PD + SY +++ L R +E +L + R + S
Sbjct: 24 LALQLFQNPN-----PDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQL--RRETRFS 76
Query: 222 GEDIVIYRTLLFALCDQGKIQD-AMQILEKI--LRKGLKAPKSRRHRIDLCPCNDGEDIE 278
++I+ + F + ++ D A+Q E I R L C + E +
Sbjct: 77 PKEIIFCNVISFY--GRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLNCKEFEKFD 134
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
G S I+ + P++ +Y+ + GR+ + V DEM K P++V + +
Sbjct: 135 GILSGID----KFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLI 190
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLC------------------- 378
+ L +D +DEA ++E+MVK V P VY L+KGLC
Sbjct: 191 SGLCRDSRLDEASR-LKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANK 249
Query: 379 ---DAGNSAVAVMYLKKMSK------------QVGCVANGETYGILVDGLCRDGRFLEAS 423
D+G + + L K+ + + GC + TY ++ G C + F A
Sbjct: 250 LRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAY 309
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VLEEM+++ P V +YNV+I GLC GK EA E+M + PD+ + L +
Sbjct: 310 GVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGL 369
Query: 484 C 484
C
Sbjct: 370 C 370
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 13/222 (5%)
Query: 32 KEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYA 91
KE K N + N VYAS++ L N ++ E+ +M + +++T I
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALF 265
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEV 147
+ G+ +E + + + + C T ++N ++ E EAA+ + ++ C
Sbjct: 266 KVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGC----- 320
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + S N+++ LC+ + A +F++M +GC PD SY IL GLC + NEA
Sbjct: 321 KPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAF 380
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+L M + KG + ALC ++ +Q E
Sbjct: 381 ILDEMVF----KGYAPKSASXTKFVEALCSGRELGVVVQSFE 418
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 179/397 (45%), Gaps = 11/397 (2%)
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE--MVKESKLEAAHILFLRSCYGWEV 147
+AR + EA +L KN + +++N L+ + +E + A I + YG V
Sbjct: 69 FARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYG--V 126
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+++ NL++ LC+ + A+ F+ GC D +Y ++ L ++++ +A
Sbjct: 127 APSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVA 186
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ +I+ G I Y LL LC G++++A+ +L KI+ G +
Sbjct: 187 LM----EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+ E K L E +RG + Y+A+ L G+I + V M ++G
Sbjct: 243 DGLGKEKRSFEAYK-LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V + L K G + A+ + + +G P VY+ L+ GLC A A+
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCAL 360
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L +M K C + TY IL+DGLC+ G A +EML P V TYN+L+ G
Sbjct: 361 EMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSG 419
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G A ++M S P++ + +L++ +C
Sbjct: 420 FCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLC 456
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 216/483 (44%), Gaps = 11/483 (2%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R R ++ + +I + K A ++F+ ++H+ +++ + + + R E
Sbjct: 18 RLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHRE 77
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLL 122
++ + + I Y A + EA ++ + + + + ++ N +L
Sbjct: 78 AGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVL 137
Query: 123 KEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ K K+ AA F + G + I + ++D L + ++ A+ + +++ G
Sbjct: 138 HGLCKSGKVLAAMDHFETTTTNGCTID--IHTYTAIVDWLAKNKKIQDAVALMEKITANG 195
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P +Y+ L+ GLC RL EA LL +I G D+V Y +L+ L + +
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLL----RKIVDNGCTPDVVTYTSLIDGLGKEKRS 251
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++ +++ +GL + G+ I A S+ +G +P + + S
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK-IPQASSVYKTMTSQGCVPDVVTLST 310
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M L GRI ++ M +G P+ V+Y A + L K +D ALE++ + M K
Sbjct: 311 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ-MKKA 369
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P YNIL+ GLC +G+ A + +M + GC + TY ILV G C+ G
Sbjct: 370 FCTPDTITYNILIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILVSGFCKAGNTDA 428
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A V ++M P V TY LI GLC + +A ++ + M + PD V+SSLV
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVD 488
Query: 482 SVC 484
+C
Sbjct: 489 GLC 491
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 189/447 (42%), Gaps = 52/447 (11%)
Query: 22 KSPLTALKIFKEAKEKY---PNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+ P A + +E +E Y P+ + HN ++ L +S ++ + + + C
Sbjct: 108 REPEEAFAVIREMEEDYGVAPSLKTHNLVLHG-----LCKSGKVLAAMDHFETTTTNGCT 162
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ + A+ ++ +AV+L + ++ C ++N LL + K +LE A I
Sbjct: 163 IDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA-ID 221
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
LR + + L+D L + +RS A +F+EM +G D Y L++GL
Sbjct: 222 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLL 281
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ +A+ S++ ++ +G D+V T++ LC G+I A++I + + +GL
Sbjct: 282 QAGKIPQAS----SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 337
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P+ YSA+ L ++ +
Sbjct: 338 ------------------------------------PNEVVYSALIHGLCKARKMDCALE 361
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L +M+ P + Y + L K G V EA +EM++ P V YNIL+ G
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDV-EAARAFFDEMLEAGCKPDVYTYNILVSGF 420
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C AGN+ A MS C N TYG L+ GLC+ + +AS + M R P
Sbjct: 421 CKAGNTDAACGVFDDMSSS-HCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y+ L+ GLC GK M +EM
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCMLFDEM 506
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 190/449 (42%), Gaps = 46/449 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L+++ +I + +++++ + C + + + + G+L EA+ L + +
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++ +L+ + KE + A+ LF V + L+ +L Q +
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLL-QAGK 285
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A V++ M QGC PD + ++ GLC R+ A + SM +G + V
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM----EARGLAPNEV 341
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y L+ LC K+ A+++L + ++K P + + I + D+E A++ +E
Sbjct: 342 VYSALIHGLCKARKMDCALEMLAQ-MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P + +Y+ + G V D+M + P++V
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVV-------------- 446
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
Y L+ GLC A +Y + M K+ GC + Y
Sbjct: 447 ----------------------TYGTLISGLCKRRQLTKASLYFQHM-KERGCPPDSFVY 483
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LVDGLC+ G+ LE +L + + RS +T LI LC + EAV L I
Sbjct: 484 SSLVDGLCKSGK-LEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAV-SLFNAIR 541
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRK 495
+ +P ++S+++++ +A +N C +
Sbjct: 542 KEGMPHPYAYNSIISTL-IKSAKVNPCTR 569
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + K+K A K+FKE + + Y ++I L ++ +I +
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR--GLVLDTVCYTALIRGLLQAGKIPQAS 290
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-------------------- 105
V M C +T I +AG++ AV +FK+
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350
Query: 106 ------------LSQFN---CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
L+Q C T ++N L+ + K +EAA F K
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG-CKPD 409
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+ C+ +D A VF +M C P+ +Y L+ GLC R+L +A+ LY
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS--LY 467
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI-DLC 269
F + ++G D +Y +L+ LC GK++ + +++ R G+ ++R I LC
Sbjct: 468 --FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC 525
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
N ++ A SL N A+ + G+P +Y+++ L ++
Sbjct: 526 KAN---RVDEAVSLFN-AIRKEGMPHPYAYNSIISTLIKSAKV 564
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 222/481 (46%), Gaps = 48/481 (9%)
Query: 46 PVYASMIGILSES--NRITEMKEVIDQM--KGDSCECKDS-VFATAIRTYARAGQLNEAV 100
P S + +L ++ +R+ +K+V ++ D K S VF IR + ++A
Sbjct: 127 PSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAF 186
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
F + + V ++FN +L +K ++ E +L+ + ++KS + + N++++V
Sbjct: 187 ECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE-MFRLKIKSTVYTFNIMINV 245
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + A M+ G P+ +Y+ ++ G C+ R+ A +L M +G
Sbjct: 246 LCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM----KNRG 301
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D Y +L+ +C GK+++A ILEK+ GL + + CN G D+ A
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG-DLVKA 360
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL--------------------- 319
+E + R +P++++Y+ + L+ EG++ E D ++
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 320 --------------DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
DEM +KG P+LV Y + + L K + A ++ E+ + +G P
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA-SP 479
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ ++N L+ G C GN A LK+M K+ V + TY L+ G CR+G+ EA +
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKR-NIVPDEVTYNTLMQGRCREGKVEEAREL 538
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
L+EM R P +YN LI G G +A +EM+S P + +++L+ +C
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598
Query: 486 N 486
N
Sbjct: 599 N 599
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 176/389 (45%), Gaps = 22/389 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++I R+ + V+D MK E + + I + G+L EA
Sbjct: 268 KPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASG 327
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE-------VKSRIQSL 154
+ + + + + ++NTL+ + L A +G+ + + +
Sbjct: 328 ILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA--------FGYRDEMVRRAILPTVSTY 379
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
NLL+ L + D A + ++M G PD +Y+IL+ G C +A +L M
Sbjct: 380 NLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMI- 438
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
KG +V Y +L++ L + +++ A + EKI+R+G + + C +G
Sbjct: 439 ---SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+++ A +L+ E R +P +Y+ + EG++ E ++L EM+ +G P + Y
Sbjct: 496 -NLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISY 554
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
++ K G +++A I +EM+ F PT+ YN L++GLC +A LK+M
Sbjct: 555 NTLISGYSKRGDINDAF-TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMV 613
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEAS 423
+ G + TY L++G+ + EAS
Sbjct: 614 SK-GITPDDSTYFSLIEGIGKVDDSSEAS 641
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 24/346 (6%)
Query: 160 VLCQCRRSDLALHVFQEMDFQGC--------------YPDRESYHILMKGLCNDR--RLN 203
+L ++SDLAL + F+G P +S L+K R +
Sbjct: 89 LLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVK 148
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ H L R+ K S +++ L+ A C+ + DA + + + KG+ PK
Sbjct: 149 DVFHELAITRDRLGTKSS----IVFDMLIRACCELKRGDDAFECFDMMKEKGV-VPKIET 203
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
L E L E ++ +++ M L EG++ + + M
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P++V Y + G V+ A V++ +G P Y L+ G+C G
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV-EPDSYTYGSLISGMCKGGKL 322
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L+KM K++G + TY L+DG C G ++A +EM+ R+ P V TYN+
Sbjct: 323 EEASGILEKM-KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTA 488
LI L GK EA +++M +PD ++ L+ C C A
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 215/464 (46%), Gaps = 44/464 (9%)
Query: 60 RITEMKEVIDQM--KGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
RI +E+ D++ D K S VF +R + +EA F + + V +
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+ N +L +K +++E A +L+ + + S + + N++++VLC+ + A
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAE-MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ G P+ SY+ ++ G + + A +L +M R+ KG D Y +L+ +C
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM--RV--KGIEPDSYTYGSLISGMC 330
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+G++++A + +K++ GL + + CN G D+E A S +E + +G +PS+
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG-DLERAFSYRDEMVKKGIMPSV 389
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++Y+ + L+ EGR+ E D ++ EMR KG P + Y + + G +A ++ E
Sbjct: 390 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 357 EMVKG---TFV-------------------------------PTVRVYNILLKGLCDAGN 382
+ KG T V P V ++N ++ G C GN
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A M LK+M ++ + T+ L+ G CR+G+ EA +L+EM R P +YN
Sbjct: 510 VERAFMLLKEMDRK-SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
LI G G +A +EM+S P + +++L+ +C N
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 8/373 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y ++I S I + ++D M+ E + + I + G+L EA
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
LF + + V ++NTL+ + LE A + + + + NLL+
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA-FSYRDEMVKKGIMPSVSTYNLLVHA 398
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L R A + +EM +G PD +Y+IL+ G +A L M KG
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML----SKG 454
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y +L++ L + ++++A + EKIL +G+ + + C +G ++E A
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG-NVERA 513
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L+ E + P +++ + EG++ E +LDEM+ +G P + Y ++
Sbjct: 514 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ G + +A V +EM+ F PT+ YN L+K LC +A LK+M + G
Sbjct: 574 YGRRGDIKDAFRV-RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK-GIS 631
Query: 401 ANGETYGILVDGL 413
+ TY L++G+
Sbjct: 632 PDDSTYLSLIEGM 644
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I +LS NR+ E ++ +++ +F + + G + A L K +
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSCYG----- 144
+ + +FNTL++ +E K+E A +L L S YG
Sbjct: 521 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580
Query: 145 ---WEVKSRIQSL---------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ V+ + S+ N L+ LC+ + DLA + +EM +G PD +Y L
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640
Query: 193 MKGLCN 198
++G+ N
Sbjct: 641 IEGMGN 646
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 179/370 (48%), Gaps = 8/370 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T F+ L++ V+ + E ++ +R + +I++L+ +++ L + R+ +ALH+F
Sbjct: 145 TLGFDLLIQTYVQNRR-ELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
E+ G PD Y +++ LC + A ++ R+ G + Y +
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI----GRMESSGCDLSVATYNVFIRG 259
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC ++ +A++I + KGL+A + L C E+ E + ++NE + G +P
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV-EEFEAGEEMMNEMIEFGFVP 318
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S A+ S + L +G I ++++++ G PSL +Y A + ++ KDG +DEA +
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
KG F P Y+IL+ C G VA+ +L KM+ +VG A Y L+ G C
Sbjct: 379 NNMGHKGLF-PNDVTYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYPYSSLISGHC 436
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ G+ A + +EM+ P V Y LI G C G+ + A EM + P+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496
Query: 475 VWSSLVASVC 484
+++L++ +C
Sbjct: 497 TFTALISGLC 506
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 202/443 (45%), Gaps = 10/443 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I + ++ K + D+M + + ++ + I Y + G+L+ A L+ ++
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
T +F L+ + +++ A+ LF W V + N+L++ C+ +
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLF-GEMVEWNVIPNEVTYNVLIEGHCKEGNT 546
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM +G PD +Y L+ GLC+ R++EA + + + Q+ E +
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL--QGEQQKLNE--MC 602
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ LL C +G++ DA+ ++L +G+ A + + + +D L+ +
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGV-AMDLVCYSVLIYGILRQQDRRSIIDLLKQM 661
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+G P Y+ M G + + D M ++G P++V Y A + L K G++
Sbjct: 662 HDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLM 721
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A E++ EM+ +P Y L L GN A+ + + G +AN TY
Sbjct: 722 DKA-ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE--GFLANTVTYN 778
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+ G C+ GR EA+ VL M+ P +Y+ +I C G EA+ E M+++
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838
Query: 468 AKLPDISVWSSLVASVCCNTADL 490
PD ++ L+ CC T +L
Sbjct: 839 GVNPDTVAYNFLIYG-CCVTGEL 860
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 195/459 (42%), Gaps = 47/459 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E R + VY +++ L E +EVI +M+ C+ + +
Sbjct: 199 ALHLFDEIVSS--GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
IR + ++ EAV + KNL + + ++ TL+ + K + EA +
Sbjct: 257 IRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V S NL+ D L + A + ++ G P Y+ L+ +C D +L+EA
Sbjct: 316 FVPSEAAVSNLV-DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
S+F + KG + V Y L+ + C +GK+ A+ L K+ G+KA
Sbjct: 375 E----SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA------- 423
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
++ YS++ G++ + DEM
Sbjct: 424 -----------------------------TVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V+Y + ++ K+G + A + E KG P + L+ GLC A A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG-ISPNTYTFTALISGLCHANRMAE 513
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +M + + N TY +L++G C++G + A +L+EM+ + P TY LI
Sbjct: 514 ANKLFGEMV-EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLCS G+ EA ++ ++ + + + +S+L+ C
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYC 611
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 219/470 (46%), Gaps = 43/470 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++G L ++ + + +M+ + I +Y Q+N A S+F +
Sbjct: 52 FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL 111
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++ TL++ + +++ + + F +K S L++ LC+ ++
Sbjct: 112 KLGYQPDIITYTTLIRGLCLNGQVKES-LNFHDRLVSQGIKLDHVSYGTLINGLCKIGQT 170
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + ++++ + C PD Y+ ++ GLC D+ + +A L MF +K ++V
Sbjct: 171 GPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF----EKRVFPNVVT 226
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y +L++ C G++ A +L +++ K + + + C +G+ + AKSL+
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK-MREAKSLVAVM 285
Query: 288 LIRGGIPSLASYSAM-------------------------AIDLYNEGRIVEG---DKVL 319
+ G P + +Y+A+ D+++ ++ G K+L
Sbjct: 286 MKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKML 345
Query: 320 DE-------MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
DE MR + P +V Y + + L K G ++ AL+ ++E +G P V Y
Sbjct: 346 DEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ-PPNVITYTS 404
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ LC + A+ LKK+ Q G AN TY ILVDGLC+DGR +A +V +++L++
Sbjct: 405 LIDALCKSHQVDKAIALLKKIKDQ-GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK 463
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ V TY+++I GLC EA+ L +M + +PD + +++ +
Sbjct: 464 GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINA 513
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 183/391 (46%), Gaps = 10/391 (2%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQS 153
LN+A+ F + + F +L +VK LF R +G ++S +
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHG--IQSNYIT 86
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN+L++ C R+ + A VF ++ G PD +Y L++GLC + ++ E+ +
Sbjct: 87 LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD--- 143
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ +G D V Y TL+ LC G+ A+++L KI + + + I C D
Sbjct: 144 -RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ + A L E + P++ +Y+++ G++ + +L+EM K P++
Sbjct: 203 -KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCT 261
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ + L K+G + EA ++ M +G P V YN L+ G + A M
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGV-GPDVFTYNALMDGYFLVKEAGKAKNVFNIM 320
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ Q+G + +Y +++ GL + EA + E M + P V Y+ LI GLC G+
Sbjct: 321 A-QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ +++EM + + P++ ++SL+ ++C
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALC 410
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 208/488 (42%), Gaps = 50/488 (10%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A +F AK Y+ + Y ++I L + ++ E D++ + + T
Sbjct: 102 SAFSVF--AKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGT 159
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + GQ A+ L + + C +NT++ + K+ + A L+ C +
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY---CEMF 216
Query: 146 E--VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
E V + + L+ C + D A + EM + P+ +++ L+ GLC + ++
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLL---FALCDQGKIQDAMQILEK---------- 250
EA L+ M ++G G D+ Y L+ F + + GK ++ I+ +
Sbjct: 277 EAKSLVAVMM----KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332
Query: 251 -ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ GL K +DL EG + NE +I P + +YS++ L
Sbjct: 333 SVMISGLSKMKMLDEAMDL--------FEGMR---NENVI----PDVVAYSSLIDGLCKS 377
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GRI K +DEM +G P+++ Y + + AL K VD+A+ ++++ +G +
Sbjct: 378 GRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG-IQANMYT 436
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YNIL+ GLC G A + + + G + TY I+++GLC++ F EA +L +M
Sbjct: 437 YNILVDGLCKDGRLTDAQKVFQDLLMK-GHNVDVVTYSIMINGLCKESLFDEALTLLSKM 495
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ P Y +I +A L EMI D C+ D
Sbjct: 496 EDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKD--------NGDTCDQYD 547
Query: 490 LNVCRKTL 497
+C++++
Sbjct: 548 EFICKRSI 555
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 157/341 (46%), Gaps = 16/341 (4%)
Query: 20 KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
K K A ++ E EK +PN Y S+I ++ + ++++M +
Sbjct: 201 KDKLVRDAFDLYCEMFEKRVFPNVV----TYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN 256
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE--MVKESKLEAAH 135
F T + + G++ EA SL + + ++N L+ +VKE+ +A +
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAG-KAKN 315
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ + + G V + S ++++ L + + D A+ +F+ M + PD +Y L+ G
Sbjct: 316 VFNIMAQMG--VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC R+N A + M +G +++ Y +L+ ALC ++ A+ +L+KI +G
Sbjct: 374 LCKSGRINSALKYVDEM----HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
++A + + C DG + A+ + + L++G + +YS M L E E
Sbjct: 430 IQANMYTYNILVDGLCKDGR-LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 488
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+L +M KG P + YE + A F+ M D+A +++ E
Sbjct: 489 LTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLRE 529
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 215/464 (46%), Gaps = 44/464 (9%)
Query: 60 RITEMKEVIDQM--KGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
RI +E+ D++ D K S VF +R + +EA F + + V +
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+ N +L +K +++E A +L+ + + S + + N++++VLC+ + A
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAE-MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ G P+ SY+ ++ G + + A +L +M R+ KG D Y +L+ +C
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM--RV--KGIEPDSYTYGSLISGMC 308
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+G++++A + +K++ GL + + CN G D+E A S +E + +G +PS+
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG-DLERAFSYRDEMVKKGIMPSV 367
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++Y+ + L+ EGR+ E D ++ EMR KG P + Y + + G +A ++ E
Sbjct: 368 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 357 EMVKG---TFV-------------------------------PTVRVYNILLKGLCDAGN 382
+ KG T V P V ++N ++ G C GN
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A M LK+M ++ + T+ L+ G CR+G+ EA +L+EM R P +YN
Sbjct: 488 VERAFMLLKEMDRK-SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
LI G G +A +EM+S P + +++L+ +C N
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 8/373 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y ++I S I + ++D M+ E + + I + G+L EA
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
LF + + V ++NTL+ + LE A + + + + NLL+
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA-FSYRDEMVKKGIMPSVSTYNLLVHA 376
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L R A + +EM +G PD +Y+IL+ G +A L M KG
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML----SKG 432
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y +L++ L + ++++A + EKIL +G+ + + C +G ++E A
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG-NVERA 491
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L+ E + P +++ + EG++ E +LDEM+ +G P + Y ++
Sbjct: 492 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ G + +A V +EM+ F PT+ YN L+K LC +A LK+M + G
Sbjct: 552 YGRRGDIKDAFRV-RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK-GIS 609
Query: 401 ANGETYGILVDGL 413
+ TY L++G+
Sbjct: 610 PDDSTYLSLIEGM 622
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I +LS NR+ E ++ +++ +F + + G + A L K +
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSCYG----- 144
+ + +FNTL++ +E K+E A +L L S YG
Sbjct: 499 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558
Query: 145 ---WEVKSRIQSL---------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ V+ + S+ N L+ LC+ + DLA + +EM +G PD +Y L
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618
Query: 193 MKGLCN 198
++G+ N
Sbjct: 619 IEGMGN 624
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 20/468 (4%)
Query: 41 YRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECK-DSVFATAIRTYARAGQL 96
Y++ GP + +L E ++E ++++D++ DS A R + +
Sbjct: 183 YKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI 242
Query: 97 NEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
A+ +F ++W T S+N ++ + + K++ AH L ++ + + S +
Sbjct: 243 EMAIKVFCEYG----ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD-VVSYS 297
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++D C AL + +M +G P+R +Y+ ++ LC + EA +L M
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM--- 354
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+SQK D V+Y TL+ G ++ A + +++L K + +P + + G
Sbjct: 355 MSQKII-PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYITYTTLIQGFGQGG 412
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++L +E + RG P +Y+ + ID+Y G +V + +EM G P++V Y
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTL-IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
A + L K G +D A E+++E KG + V +YN ++ G+C AGN A+ +K+M
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQL-NVCIYNSMVNGICKAGNIEQAIKLMKEM- 529
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY ++D CR G +A ++L+EML R P V T+NVL+ G C +G
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ L M+ + +PD +++L+ C + +N K +++ +
Sbjct: 590 EDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS-MNTTTKIYKRMRN 636
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 227/527 (43%), Gaps = 55/527 (10%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+LS+I + A+K+F E + +N +Y+ L ++ E ++ QM
Sbjct: 231 FLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYS-----LCRLGKVKEAHRLLMQMD 285
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS---------QFNCV-----NWTQSF 118
S ++T I Y G+L +A+ L ++ +N + +SF
Sbjct: 286 FRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSF 345
Query: 119 NT--LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL----- 171
+L+EM+ + K+ ++++ +G+ +++ N D + + S +
Sbjct: 346 EAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404
Query: 172 --------------HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++F EM +G PD +Y L+ C + A +S+ +
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA----FSLHNEMV 460
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
Q G +IV Y L+ LC G++ A ++L+++ +KGL+ + + C G +I
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG-NI 519
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A L+ E + G P +Y+ + ID Y G I + K+L EM +G P++V +
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTV-IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ GM+++ ++ + KG VP YN L+K C + K+M Q
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKG-IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + TY IL+ G C+ EA + +EM+ + Y P V +YN LI+ K E
Sbjct: 638 -GVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTAD----LNVCRKTLEQ 499
A EEM + D +++ V +C D LN+C + +E+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVEITLNLCDEAIEK 742
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 18/288 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K TA ++ E ++K + N +Y SM+ + ++ I +
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M+ + + T I Y R G +++A L + + +FN L+
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
LE L GW ++ I + N LM C + +++ M QG
Sbjct: 584 CMLGMLEDGDRLL-----GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD +Y+IL+KG C R L EA L M +KG + Y L+ + KI
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMI----EKGYVPTVTSYNALIKRFYKKKKI 694
Query: 242 QDAMQILEKILRKGLKAP-KSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+A ++ E++ GL A + +D+ C + D+E +L +EA+
Sbjct: 695 LEARELFEEMRGHGLVADGEIYNFFVDM--CYEEGDVEITLNLCDEAI 740
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 215/450 (47%), Gaps = 25/450 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ LS+++ +T + D M D + IR G EA+S+ +++
Sbjct: 119 YNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMR 177
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++NTL+ + +++ A L G +K + + N +++ +C+ +
Sbjct: 178 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG-LKPNLVTFNSMVNGMCKAGKM 236
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A VF EM +G PD SY+ L+ G C +H S+F ++QKG D+V
Sbjct: 237 EDARKVFDEMMREGLAPDGVSYNTLVGGYCK----AGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ +L+ +C G ++ A+ ++ ++ +GL+ + + DG +G +++A
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQM-----NEVTFTALIDGFCKKG---FLDDA 344
Query: 288 L--IRGG-----IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L +RG PS+ Y+A+ GR+ E ++L EM KG P +V Y ++A
Sbjct: 345 LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+ A E+ ++ + KG +P Y+ L++ LC+ + A + K M K +G
Sbjct: 405 YCKNCDTHSAFELNQQMLEKGV-LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK-LGLQ 462
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+DG C++G A + ++M+ P V TY+VLI GL + EA
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADL 490
L ++ + +P + + +L+ CC A+L
Sbjct: 523 LFKLYHEEPIPANTKYDALMH--CCRKAEL 550
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P +Y+ ++ L +D L A SM G ++ Y L+ ALC +G
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSML----SDGVAPNVYTYNILIRALCGRGH 165
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
++A+ IL + G P + + +++GA+ L+ L G P+L +++
Sbjct: 166 RKEALSILRDMRGAGC-GPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFN 224
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+M + G++ + KV DEM +G P V Y + K G EAL V E K
Sbjct: 225 SMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK 284
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G +P V + L+ +C AGN AV +++M ++ G N T+ L+DG C+ G
Sbjct: 285 G-IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM-RERGLQMNEVTFTALIDGFCKKGFLD 342
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A + M P V YN LI G C +G+ EA L EM ++ PD+ +S+++
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Query: 481 ASVCCN 486
++ C N
Sbjct: 403 SAYCKN 408
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 189/448 (42%), Gaps = 56/448 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ SM+ + ++ ++ + ++V D+M + + T + Y +AG +EA+S+F +
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+Q + +F +L+ M K LE A + +R ++ + L+D C+
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWA-VTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL + M P Y+ L+ G C R++EA LL+ M KG D+V
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM----EAKGLKPDVV 396
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ A C A ++ +++L KG+
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGV------------------------------ 426
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+P +YS++ L E R+ + + M G P Y + + K+G
Sbjct: 427 ------LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 480
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+ AL + ++MVK +P V Y++L+ GL + + A L K+ + AN +
Sbjct: 481 VERALS-LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539
Query: 407 GI--------------LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ L+ G C G EA +V + ML R++ Y+VLI G C G
Sbjct: 540 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 599
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A+ + ++M+ + P+ + SL+
Sbjct: 600 NVMKALSFHKQMLQRGFAPNSTSTISLI 627
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 224/504 (44%), Gaps = 58/504 (11%)
Query: 24 PLTALKIFKEAKEKY--PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
P A +IFK+ K PN + S++ S S+ ++ +E + +
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVN 209
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F I Y + +AV + ++NC ++NT+L + K+ +L A L +
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM-- 267
Query: 142 CYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
++KSR + N+L+ C+ A +V + M PD +Y++L+ GL
Sbjct: 268 ----DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
CN+ R+ EA L M D+V Y TL+ + KI +A ++LE++ KG+
Sbjct: 324 CNEGRIEEAFKLRDEM----ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 257 KAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
K P + H I + C +G+ ++ A + I + G P +Y+ + G + E
Sbjct: 380 K-PNAVTHNIMVKWYCKEGK-MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Query: 316 DKVLDEM-----------------------------------RTKGFWPSLVMYEAKLAA 340
+ +DEM R +G++ V Y +
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
FKDG VD AL+ + +EM + +P+ YN ++ GLC G + A+ L ++ + G +
Sbjct: 498 YFKDGNVDRALK-LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLL 555
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++ G CR+G +A + +M+ S+ P V T N+L+RGLC G +A+
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKL 615
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+S+ K D +++L+ S+C
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLC 639
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 223/538 (41%), Gaps = 73/538 (13%)
Query: 6 PRLLTPTYLSQIIKKQ--KSPLTALKIFKEAKEKYPNYRHN------------------G 45
P L P LS + K P + FK A+ P + HN
Sbjct: 46 PHLTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFS 105
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
+ ++G ++ ++R ++ I ++ S ++ TAI Y ++GQ + A +FK
Sbjct: 106 DAKSLLLGFIA-TDRRHDLHLSILRLTSPS----KALLDTAIGAYVQSGQPHHAFQIFKK 160
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVK----SRIQSLNLLMDV 160
+ + + NTLL +V + ++H + F R + +K + + N+++
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYG 217
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C + A+ M C PD +Y+ ++ LC RL +A LL M +G
Sbjct: 218 YCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDM----KSRG 273
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ Y L++ C G +++A ++E + + L + + CN+G IE A
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR-IEEA 332
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L +E +P + SY+ + +I E K+L+EM KG P+ V + +
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM------- 393
K+G +D+A I +M + F P YN L+ G C AGN A + +M
Sbjct: 393 YCKEGKMDDASNTI-TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 394 ---------------------------SKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+++ G + +YG L+ G +DG A ++
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM + P TYN +I GLC GK +A+ L E++ LPD + +++++ C
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 216/468 (46%), Gaps = 33/468 (7%)
Query: 31 FKEAKE------KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
FK+A E KY N + Y +++ L + R+ + ++++ MK + +
Sbjct: 224 FKDAVEFLNVMGKY-NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
+ Y + G L EA ++ + ++Q N + ++N L+ + E ++E A
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA---------- 332
Query: 145 WEVKSRIQSLNLLMDVLC---------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
++++ +++L LL DV+ + + A + +EM +G P+ +++I++K
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C + ++++A++ + M + G D V Y TL+ C G + +A + ++++ RK
Sbjct: 393 YCKEGKMDDASNTITKM----EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+K + I C + + +E A L++ A RG SY + + + +G +
Sbjct: 449 MKMDSVTLNTILRTLCRE-KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
K+ DEM+ K PS V Y + L + G ++A+ + E + G +P YN +L
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG-LLPDETTYNTILH 566
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G+ A + KM + + T IL+ GLC +G +A ++ + +
Sbjct: 567 GYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKA 625
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN LI LC G+ +A L EM + PD +++++ ++
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 172/431 (39%), Gaps = 40/431 (9%)
Query: 27 ALKIFKEAKEK--YPN-YRHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
A K+ +E EK PN HN V Y + SN IT+M+E G S +C
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE-----SGFSPDC--V 419
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-- 139
+ T I Y +AG + EA + + N + + NT+L+ + +E KLE A+ L
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 140 --RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R + EV S L+ + D AL ++ EM + P +Y+ ++ GLC
Sbjct: 480 RKRGYFIDEV-----SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +A L + + G D Y T+L C +G ++ A Q K++ K
Sbjct: 535 QCGKTEQAISKLNELL----ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C +G +E A L N + +G +Y+ + L EGR+ +
Sbjct: 591 PDVFTCNILLRGLCMEGV-LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L EM K P Y A + AL G + EA E + + + KG V
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV---------- 699
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ V VA Y + LC +G++ +A R+ E +
Sbjct: 700 LQLDKNETVVTSETSEESDSSSVA----YSEWIKELCTEGKYKDAMRIFGESKQKGITVD 755
Query: 438 VETYNVLIRGL 448
TY L+ GL
Sbjct: 756 KSTYINLMDGL 766
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 134/311 (43%), Gaps = 45/311 (14%)
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+L+ + DRR H L+ R++ + T + A G+ A QI +K
Sbjct: 110 LLLGFIATDRR-----HDLHLSILRLTSPSKA----LLDTAIGAYVQSGQPHHAFQIFKK 160
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ K R R +L CN +L+N +L+R S+S A + +
Sbjct: 161 M--------KRLRLRPNLLTCN---------TLLN-SLVRYPSSHSVSFSREAFNDAIKL 202
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
IV + +V+Y L FKD + E L V M K P Y
Sbjct: 203 GIVPNVNTFN----------IVIYGYCLENKFKDAV--EFLNV----MGKYNCSPDNVTY 246
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N +L LC G A L M K G + N TY ILV G C+ G EA+ V+E M
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P V TYN+LI GLC+ G+ EA +EM + LPD+ +++L+ C + +
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING-CLEWSKI 364
Query: 491 NVCRKTLEQLS 501
+ K LE++S
Sbjct: 365 SEAFKLLEEMS 375
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 174/340 (51%), Gaps = 11/340 (3%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S + +L ++++ C R D V ++ G PD ++ L++GLC + ++ EA
Sbjct: 105 IPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEAL 164
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
HL F ++ +G + V Y TL+ LC G + A+++L +++K + + I
Sbjct: 165 HL----FDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTI 220
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL--YNEGRIVEGDKVLDEMRT 324
C D + + A ++ +E + +G P++++Y+++ L ++E + V +++EM
Sbjct: 221 IDCLFKDRQ-VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVA--TLMNEMVD 277
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
P++V++ + AL K+GMV A +V++ + +G P V Y L+ G C
Sbjct: 278 SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV-EPDVVTYTALMDGHCLRSEMD 336
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M ++ GC N +Y L++G C+ R +A + EEM R P + TYN L
Sbjct: 337 EADKVFDTMVRK-GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I GLC +G+ +A+ EM++ ++PD+ + L+ +C
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 202/453 (44%), Gaps = 16/453 (3%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
KIFK + + + ++I L +I E + D+M G+ + + T I
Sbjct: 134 KIFKLGHQP------DTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIH 187
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+ G A+ L +++ Q NC ++NT++ + K+ ++ A +F +
Sbjct: 188 GLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIF-SEMIAKGIS 246
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + N ++ LC+ + EM P+ + L+ LC + + A +
Sbjct: 247 PNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV 306
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ M Q+G D+V Y L+ C + ++ +A ++ + ++RKG AP + +
Sbjct: 307 VDVMI----QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC-APNVISYSTLI 361
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+ I+ A L E R +P++ +Y+ + L + GR+ + + EM G
Sbjct: 362 NGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI 421
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAV 387
P LV Y L L K +D+A+ +++ ++G+ P ++ YNI++ G+C G A
Sbjct: 422 PDLVTYRILLDYLCKTRHLDQAMAMLKA--IEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+S + G + TY I+++GLC G EA+++ EM P TYN++ RG
Sbjct: 480 DLFSSLSSK-GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ A+ L+EM+ + D S + +V
Sbjct: 539 FLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 20/356 (5%)
Query: 140 RSCYGWEVKSRI---------QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
R +G+ V ++I + L+ LC + ALH+F +M +G P+ +Y
Sbjct: 124 RVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYG 183
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC A LL SM QK +++ Y T++ L ++ +A+ I +
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMV----QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSE 239
Query: 251 ILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++ KG+ S + I LC ++ + + +L+NE + +P++ ++ + L
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHV---ATLMNEMVDSKIMPNVVIFTTLVDALCK 296
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
EG + V+D M +G P +V Y A + +DEA +V + MV+ P V
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT-MVRKGCAPNVI 355
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y+ L+ G C A MYL + Q V N TY L+ GLC GR +A + E
Sbjct: 356 SYSTLINGYCKIQRIDKA-MYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+ P + TY +L+ LC +A+ L+ + PDI ++ ++ +C
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 179/464 (38%), Gaps = 86/464 (18%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ NG Y ++I L + ++ M +CE + T I + Q+NEA+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 101 SLFK---------NLSQFNCV--------NWTQS------------------FNTLLKEM 125
++F N+S +N + W F TL+ +
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 126 VKESKLEAAH----ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
KE + AH ++ R V+ + + LMD C D A VF M +G
Sbjct: 295 CKEGMVTIAHDVVDVMIQRG-----VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ SY L+ G C +R+++A +L F + Q+ +IV Y TL+ LC G++
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYL----FEEMCQRELVPNIVTYNTLIHGLCHVGRL 405
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+DA+ +L +E + G IP L +Y
Sbjct: 406 RDAI------------------------------------ALFHEMVASGQIPDLVTYRI 429
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L + + +L + P + Y + + + G ++ A ++ KG
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V Y I++ GLC G A A ++M+ GC + TY ++ G R+ L
Sbjct: 490 LH-PDVWTYTIMINGLCLQGLLAEATKLFREMNTD-GCSPDDCTYNLITRGFLRNNETLS 547
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
A ++L+EML R + T +++ L G L E +
Sbjct: 548 AIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEAL M+ P+V + +L + + + + V+ L K +G ++ T
Sbjct: 55 IDEALSSFNR-MLHMQPPPSVVDFAKILTSIANMKHYS-TVLSLSKQMDSLGIPSDVYTL 112
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I+++ C R VL ++ + P T+ LIRGLC GK EA+ ++M+
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 467 QAKLPDISVWSSLVASVC 484
+ P+ + +L+ +C
Sbjct: 173 EGFQPNGVTYGTLIHGLC 190
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 215/482 (44%), Gaps = 17/482 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV- 67
L+ T + Q ++ K P A F EK + HN Y M+ IL + +
Sbjct: 83 LSKTTVFQTLRHIKVPTKAFLFFNWIHEK--GFSHNPQTYFIMLEILGREKNLNIARNFL 140
Query: 68 --IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
I++ + +D F + IR+Y AG E+V LF+N+ +FN++L +
Sbjct: 141 YSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVL 200
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + A ++ + VK + N+L+ C+ D + F+EM C PD
Sbjct: 201 LKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPD 260
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC ++ A +L+ M + K D+V Y TL+ C + ++ +A+
Sbjct: 261 VVTYNTLVDGLCRAGKIKVAHNLVNGMSKKC--KDLSPDVVTYTTLIRGYCRKQEVDEAL 318
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAI 304
ILE++ +GLK P + + + + + K ++ + GG IP +++ +
Sbjct: 319 DILEEMNGRGLK-PNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLIN 377
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEEEMVK 360
G + E KV + M+ Y + L + G +A E+ E+E++
Sbjct: 378 SHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILL 437
Query: 361 GTF--VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
++ P Y + + LC+ G + A L+++ K+ + +Y I++ G C++G
Sbjct: 438 SSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKR--GTQDPLSYQIVILGHCKEGS 495
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+ +L ML R + P ++ Y+ LI G K A LE+M+ + P S W S
Sbjct: 496 YENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHS 555
Query: 479 LV 480
++
Sbjct: 556 IL 557
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 220/535 (41%), Gaps = 88/535 (16%)
Query: 30 IFKEAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVF 83
+FKE+ + + N + G + S++ +L + R KEV D+M K + +
Sbjct: 170 LFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTY 229
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLR 140
IR + + ++E FK ++ F+C ++NTL+ + + K++ AH L +
Sbjct: 230 NILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSK 289
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
C ++ + + L+ C+ + D AL + +EM+ +G P+ +Y+ L+KGLC +
Sbjct: 290 KCK--DLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQ 347
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+ ++ +L M GS D + TL+ + C G + +A ++ E + + + A
Sbjct: 348 KWDKMKEILEQM---KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADS 404
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIR-------GGIPSLASYSAMAIDLYNEGRIV 313
+ + C G D A+ L +E + G P ASY M L G+
Sbjct: 405 ASYSVLIRTLCQKG-DYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTK 463
Query: 314 EGDKVLDEMRTKG----------------------------------FWPSLVMYEAKLA 339
+ ++VL ++ +G F P + +Y+ +
Sbjct: 464 KAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLID 523
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG----NSAVAVMYLKKMSK 395
+ A E +E+ M+K ++ P ++ +L L + G ++ V VM L++ +
Sbjct: 524 GFLRKDKPLLAKETLEK-MLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIR 582
Query: 396 Q-----VGCV--------------------ANGETYGI--LVDGLCRDGRFLEASRVLEE 428
Q C+ NG + +V LC R LEA ++L
Sbjct: 583 QNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLF 642
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L + + N++I LC + K EA E++ + D+ + LVA++
Sbjct: 643 SLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAAL 697
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G E K+ + M+ G P +V + + L L K G + A EV +E + P
Sbjct: 169 GLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYT 228
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YNIL++G C + K+M+ C + TY LVDGLCR G+ A ++ M
Sbjct: 229 YNILIRGFCKNSMVDEGFYFFKEMT-SFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGM 287
Query: 430 --LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P V TY LIRG C + EA+ LEEM + P+I +++L+ +C
Sbjct: 288 SKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLC 344
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 141/352 (40%), Gaps = 37/352 (10%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS------------------ 211
A F + +G + ++Y I+++ L ++ LN A + LYS
Sbjct: 101 AFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNS 160
Query: 212 ----------------MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+F + G +V + ++L L +G+ A ++ +++L+
Sbjct: 161 LIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTY 220
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + + I + ++ E P + +Y+ + L G+I
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 316 DKVLDEM--RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+++ M + K P +V Y + + VDEAL+++EE +G P + YN L
Sbjct: 281 HNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRG-LKPNIVTYNTL 339
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+KGLC+A L++M G + + T+ L++ C G EA +V E M
Sbjct: 340 IKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLE 399
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+Y+VLIR LC G +A M +E+ + L L AS C
Sbjct: 400 VSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKC 451
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 207/450 (46%), Gaps = 24/450 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
+++++ L +R++E Q+ CK +V F T + R G++ EAV+L
Sbjct: 148 TFSTLLHGLCVEDRVSEALHFFHQI------CKPNVIAFTTLMNGLCREGRVVEAVALLD 201
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ T++ M K +A L + +K + + ++D L +
Sbjct: 202 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKD 261
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R A ++F EM +G P+ +Y+ ++ G C+ R +EA LL MF ++ D
Sbjct: 262 GRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF----ERKMSPD 317
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V + L+ AL +GK +A ++ ++L +G+ P + + + + ++ A+ +
Sbjct: 318 VVTFSVLINALVKEGKFFEAEELYNEMLPRGI-IPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+G P + ++S + R+ +G K+L EM +G + + Y + +
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV------- 397
G ++ AL++++E M+ P V N LL GLC+ G A+ K M K
Sbjct: 437 GNLNAALDLLQE-MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 398 ---GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ +TY IL+ GL +G+F EA + EEM R P TYN +I GLC +
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA + M S+ PD+ +++L+ C
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYC 585
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 194/436 (44%), Gaps = 36/436 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A +F E +EK N Y MI S R +E + ++ +M F+
Sbjct: 267 AQNLFSEMQEK--GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVL 324
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGW 145
I + G+ EA L+ + + T ++N+++ K+++L+AA +F L + G
Sbjct: 325 INALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG- 383
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + ++L+D C +R D + + EM +G + +Y L+ G C LN A
Sbjct: 384 -CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M G ++V TLL LC+ GK++DA+++ K+++K +
Sbjct: 443 LDLLQEMI----SSGVCPNVVTCNTLLDGLCNNGKLKDALEMF-KVMQKS---------K 488
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+DL + D+E P + +Y+ + L NEG+ E +++ +EM +
Sbjct: 489 MDLDASHPFNDVE---------------PDVQTYNILICGLINEGKFSEAEELYEEMPHR 533
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + + L K +DEA ++ + KG F P V + L+ G C G
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG-FSPDVVTFTTLINGYCKVGRVGD 592
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ +M ++ G VAN TY L+ G C+ G A + +EM+ +P T ++
Sbjct: 593 GLEVFCEMGRR-GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651
Query: 446 RGLCSIGKQYEAVMWL 461
GL S + AV L
Sbjct: 652 TGLWSKEELKRAVQCL 667
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 183/426 (42%), Gaps = 46/426 (10%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L++A+ LF + + + F LL +V+ + + I R + I S
Sbjct: 57 LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVV-ISLHRKMEMRRIPCNIYSFT 115
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+ C C + AL F ++ G +P ++ L+ GLC + R++EA H + +
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI--- 172
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+++ + TL+ LC +G++ +A+ +L++++ GL+ + I C G+
Sbjct: 173 -----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227
Query: 276 DIEG-----------------------------------AKSLINEALIRGGIPSLASYS 300
+ A++L +E +G P+L +Y+
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M + GR E ++L EM + P +V + + AL K+G EA E+ E + +
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G +P YN ++ G A M+ + GC + T+ IL+DG C R
Sbjct: 348 G-IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK-GCSPDVITFSILIDGYCGAKRVD 405
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++L EM R TY LI G C +G A+ L+EMIS P++ ++L+
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465
Query: 481 ASVCCN 486
+C N
Sbjct: 466 DGLCNN 471
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 45/473 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + + K ++AL + ++ +E + N +Y+++I L + R T+ +
Sbjct: 210 PNQITYGTIVDGMCKMGDTVSALNLLRKMEE-VSRIKPNVVIYSAIIDGLWKDGRQTDAQ 268
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M+ + I + +G+ +EA L + + + +F+ L+ +
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE K A L+ + + I + N ++D + R D A +F M +GC PD
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTI-TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPD 387
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++ IL+ G C +R+++ LL+ M S++G + + Y TL+ C G + A+
Sbjct: 388 VITFSILIDGYCGAKRVDDGMKLLHEM----SRRGLVANTITYTTLIHGFCQLGNLNAAL 443
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP----CNDGEDIEGAKSLINEALIRGGIP--SLASY 299
+L++++ G+ CP CN D L N ++ + +
Sbjct: 444 DLLQEMISSGV------------CPNVVTCNTLLD-----GLCNNGKLKDALEMFKVMQK 486
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S M +D + VE P + Y + L +G EA E+ EE
Sbjct: 487 SKMDLDASHPFNDVE--------------PDVQTYNILICGLINEGKFSEAEELYEEMPH 532
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G VP YN ++ GLC A M + G + T+ L++G C+ GR
Sbjct: 533 RG-LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK-GFSPDVVTFTTLINGYCKVGRV 590
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ V EM R TY LI G C +G A+ +EMIS PD
Sbjct: 591 GDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 12/428 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
+ S++ L + R + KEV M D C V F I + R G++ EA+ +K
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVFRAM--DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYK 286
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ Q SF+ L+ K++ A +LR G + +++ C+
Sbjct: 287 EMQQRGVTPDVVSFSCLIGLFSTRGKMDHA-AAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V EM GC PD +Y+ L+ GLC RL +A LL M ++G D
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM----KERGVTPD 401
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ + TL+ C G + A+Q+ + +L + L+ + + C G D+ A L
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKG-DLAKANELW 460
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ R P+ +YS + +G++ E LDEM +KG P+++ Y + + +
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V + + +++ M++ +P + +N L+ G N A M K++ +
Sbjct: 521 GNVKKGQQFLQK-MMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM-VQPDAV 578
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY ++++G G EA RV ++M P TY LI G + G EA +EM
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638
Query: 465 ISQAKLPD 472
+ + PD
Sbjct: 639 MHRGFAPD 646
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 187/394 (47%), Gaps = 8/394 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ +Y ++ + ++A ++ + + + N L+ + ++AA I + S
Sbjct: 164 VHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA-IALVDSMANKG 222
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K I + N ++ LC+ RR D A VF+ MD PD S++IL+ G C + EA
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
M Q+G D+V + L+ +GK+ A L ++ GL P + +
Sbjct: 283 KFYKEM----QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL-VPDGVIYTM 337
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + A + +E + G +P + +Y+ + L + R+++ +++L+EM+ +G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +DG ++AL++ + ++ P V YN L+ G+C G+ A A
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDT-LLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M + N TY IL+D C G+ EA L+EM+ + P + TYN +I+
Sbjct: 457 NELWDDMHARE-IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G C G + +L++M+ LPD+ +++L+
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 190/429 (44%), Gaps = 16/429 (3%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R +E++ + S + VF IRTY ++ + EA F+ L + N
Sbjct: 67 RGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASN 126
Query: 120 TLLKEMVKES---KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
LL + + E A+ L L S + + +LN+++ C+ D A V E
Sbjct: 127 ALLAALSRAGWPHLAEEAYRLVLSS----DSEVNAYTLNIMVHSYCKSLEFDKADTVISE 182
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ + +PD ++++L+ ++ A L+ SM + KG IV + ++L LC
Sbjct: 183 MEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM----ANKGLKPGIVTFNSVLKGLC 238
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPS 295
+ A ++ + + + AP R I + C GE +E A E RG P
Sbjct: 239 KHRRFDKAKEVF-RAMDQCSVAPDVRSFNILIGGFCRVGE-VEEAMKFYKEMQQRGVTPD 296
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ S+S + G++ L EM+ G P V+Y + + G + EAL V
Sbjct: 297 VVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-R 355
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+EMV +P V YN LL GLC A L +M K+ G + T+ L+ G CR
Sbjct: 356 DEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM-KERGVTPDLCTFTTLIHGYCR 414
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
DG F +A ++ + +L + P V YN LI G+C G +A ++M ++ P+
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 476 WSSLVASVC 484
+S L+ S C
Sbjct: 475 YSILIDSHC 483
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 177/391 (45%), Gaps = 12/391 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG ++ A++L +++ +FN++LK + K + + A +F R+ V +
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF-RAMDQCSVAPDV 262
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S N+L+ C+ + A+ ++EM +G PD S+ L+ +++ A L
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322
Query: 212 MFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M KG G D VIY ++ C G + +A+++ ++++ G P + L
Sbjct: 323 M------KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC-LPDVVTYNTLLN 375
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ A+ L+NE RG P L +++ + +G + ++ D + + P
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+V Y + + + + G + +A E+ ++ + F P Y+IL+ C+ G A +
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF-PNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L +M + G + N TY ++ G CR G + + L++M+ + P + T+N LI G
Sbjct: 495 LDEMVSK-GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ A M + PD ++ ++
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N T I+V C+ F +A V+ EM R +P V T+NVLI G A+ +
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 462 EEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ M ++ P I ++S++ +C + + ++ + CS
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRR-FDKAKEVFRAMDQCS 257
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 187/429 (43%), Gaps = 68/429 (15%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+ + ++S+L+ A + FLR G E + S N LM C+ D+A F M
Sbjct: 241 LIDGLCRQSRLQDA-VTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHL---------------------------LYSMF 213
G PD SY+IL+ GLC + EA L S
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 214 WRISQK----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
W++ Q+ G D+V Y L+ C G I+++ ++ EK+L +GLK +
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C G I+ A L++E + G P L +YS + L G + E ++ +EM +K +P
Sbjct: 420 LCKSGR-IDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYP 478
Query: 330 SLVMYEAKLAALFKDGMVDEAL---------EVIEE------------------------ 356
+ + A ++ LF+ G + EA +V EE
Sbjct: 479 NSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSY 538
Query: 357 -EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
++++ PT+ +N L+ G C G A AV L + K G V TY L++G C
Sbjct: 539 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI-KVHGLVPTSVTYTTLMNGYCE 597
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G +L EM ++ P TY V+++GLC G+ +E+V L+ M ++ PD
Sbjct: 598 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 657
Query: 476 WSSLVASVC 484
+++++ S C
Sbjct: 658 YNTVIQSFC 666
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 34/369 (9%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K I + +L+ LC+ R D A+ + EM+ G PD +Y +L+ GLC + EA
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465
Query: 207 HLLYSM-------------------------------FWRISQKGSGEDIVIYRTLLFAL 235
L M F +++ E+I++Y ++
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
G I +A++ ++I+ KG+ + + C G+ E K L++ + G +P+
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK-LLDTIKVHGLVPT 584
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ + EG + +L EM K P+ + Y + L K+G + E++++++
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+G F P YN +++ C A + A +M Q + TY +L++GLC
Sbjct: 645 YMYARGLF-PDQITYNTVIQSFCKAHDLQKAFQLHNQM-LQHSLQPSPVTYNVLINGLCV 702
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G +A R+L + +S Y +I+ C+ G A+++ +M+ + I
Sbjct: 703 YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRD 762
Query: 476 WSSLVASVC 484
+S+++ +C
Sbjct: 763 YSAVINRLC 771
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 143/343 (41%), Gaps = 48/343 (13%)
Query: 147 VKSRIQSLNLLMDV------LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
V ++++ LNL + + L R +D+ V+ E+ G + + IL+ GLC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQS 249
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
RL +A L + G +V + L+ C G + A +++ GL
Sbjct: 250 RLQDAVTFLR----ETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGL---- 301
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+P + SY+ + L G + E + +
Sbjct: 302 --------------------------------LPDVYSYNILLHGLCVAGSMEEALEFTN 329
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M G P +V Y G++ A +V++ ++ G P + Y IL+ G C
Sbjct: 330 DMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNG-LNPDLVTYTILICGHCQM 388
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
GN + +KM Q G + TY +L+ LC+ GR EA +L EM + P + T
Sbjct: 389 GNIEESFKLKEKMLSQ-GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
Y+VLI GLC G EA+ EEM S+ P+ V S++++ +
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 160/395 (40%), Gaps = 42/395 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P LLT + L + K+ + A+++++E +K YPN V +++I L E I+E
Sbjct: 443 PDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN----SFVCSAIISGLFEKGAISE 498
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ D + + ++ I YA+ G + EAV +K + + +FN+L+
Sbjct: 499 AQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIY 558
Query: 124 EMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K+ KL EA +L +G S + LM+ C+ + EM+ +
Sbjct: 559 GFCKKGKLAEAVKLLDTIKVHGLVPTS--VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 616
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWR--------------------------- 215
P + +Y +++KGLC + RL+E+ LL M+ R
Sbjct: 617 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 676
Query: 216 ----ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
+ Q V Y L+ LC G ++DA ++L + + ++ K I C
Sbjct: 677 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 736
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
G D++ A ++ + RG S+ YSA+ L I + M T G P
Sbjct: 737 AKG-DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ 795
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+ L A + G + E+ M+K +P
Sbjct: 796 DICLVMLNAFHRSGDPNSVFEIF-AMMIKCGLLPV 829
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 213/451 (47%), Gaps = 30/451 (6%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y +IG L RI + +++ D+M + + T I Y + G+L+ A
Sbjct: 208 RPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFK 267
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL--------FLRSCYGWEVKSRIQS 153
+ + + + + +FN+LL + K K++ A L F+ Y + +
Sbjct: 268 MRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI------ 321
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L D L +C + A+ ++++ +G + + IL+ GLC ++ +A +L
Sbjct: 322 ---LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL---- 374
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ ++ G D VIY T + C G + A+ +E++ GL+ P S + D
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLR-PNSITFNSLIDKFCD 433
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK---VLDEMRTKGFWPS 330
++++ A+ + + +G PS+ +Y+ + ID Y G++ D+ +L++M G P+
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTL-IDGY--GKLCTFDRCFQILEQMEEIGVKPN 490
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + L KDG + EA E++ +M+ +P +VYN+L+ G C G A+ +
Sbjct: 491 VVSYGSLINCLCKDGKILEA-EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M + TY +L+DGLC+ G+ EA L ++ + P V TYN LI G +
Sbjct: 550 DEMMRS-EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
G + + E M + P + + L++
Sbjct: 609 AGNVSKCLGLYETMKNLGIKPTVRTYHPLIS 639
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 209/464 (45%), Gaps = 13/464 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + +YA I + + E +D M+ ++ I R ++ +A
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + N V ++NTL+ K +L+AA + R V I + N L+
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRER-MKEKSVAPNIITFNSLLSG 290
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL--CNDRRLNEATHLLYSMFWRISQ 218
LC+ R+ A + +EM+ G PD +Y IL GL C+D N A L + + ++
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAMEL----YEQATE 344
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
KG + LL LC QGK++ A +IL+K GL A + + C G D+
Sbjct: 345 KGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG-DMN 403
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A I G P+ +++++ + + + ++ + +M KG PS+ Y +
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K D +++E+ M + P V Y L+ LC G A + L+ M + G
Sbjct: 464 DGYGKLCTFDRCFQILEQ-MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR-G 521
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N + Y +L+DG C G+ +A R +EM+ P + TYNVLI GLC GK EA
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+L ++ S PD+ ++SL++ N +++ C E + +
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGY-ANAGNVSKCLGLYETMKN 624
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 213/457 (46%), Gaps = 11/457 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A++++++A EK R N + ++ L + ++ + +E++ + + + ++ T
Sbjct: 335 AMELYEQATEK--GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ Y R G +N+A+ + + F + +FN+L+ + +++ A +++
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE-EWVKKMAEKG 451
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V +++ N L+D + D + ++M+ G P+ SY L+ LC D ++ EA
Sbjct: 452 VTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE 511
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L M R G + +Y L+ C GK++DA++ ++++R + + +
Sbjct: 512 IVLRDMICR----GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ E A+ + + G P + +Y+++ N G + + + + M+ G
Sbjct: 568 IDGLCKKGKLTE-AEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLG 626
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y ++ K+G+ E +E + EM++ +P VYN ++ + GN+ A
Sbjct: 627 IKPTVRTYHPLISGCSKEGI--ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ M Q G + TY L+ G R+G+ ++ M + P +TY++L++
Sbjct: 685 YSLHQGMLDQ-GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G C + A +W EM+ LP+ S+ + L A +
Sbjct: 744 GHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGL 780
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 140/390 (35%), Gaps = 77/390 (19%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N + S+I + + + +E + +M + T I Y + +
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQ 477
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + + S+ +L+ + K+ K+ A I+ LR V Q N+L+D
Sbjct: 478 ILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV-LRDMICRGVLPNAQVYNMLIDGS 536
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C + AL F EM P +Y++L+ GLC +L EA L +I+ G
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFL----TQITSSGH 592
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D++ Y +L+ + G + + + E + G+K P R + + C+ E IE +
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK-PTVRTYHPLISGCSK-EGIELVE 650
Query: 282 SLINEAL----------------------------------IRGGI-PSLASYSAMAIDL 306
L NE L + GI P +Y+++ +
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710
Query: 307 YNEGRIVEGDKVLDEMRTK-----------------------------------GFWPSL 331
+ EG++ +++ M+ K F P+
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNA 770
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ A L ++G + E + E VKG
Sbjct: 771 SICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 118/316 (37%), Gaps = 35/316 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I L + +I E + V+ M V+ I G++ +A+ F +
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++N L+ + K+ KL A FL + + N L+
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAED-FLTQITSSGHSPDVITYNSLISGYANAGNV 612
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKG--------------------LCNDRRLNEA-- 205
L +++ M G P +YH L+ G L DR + A
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMI 672
Query: 206 --------THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
T YS+ + +G D + Y +L+ +GK+ + ++ + K L
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL- 731
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
APK+ + I + D +D GA E + +P+ + + + L EGR+ E
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791
Query: 318 VLDEMRTKGF---WPS 330
+ EM KG WPS
Sbjct: 792 ICSEMNVKGIINHWPS 807
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 193/408 (47%), Gaps = 13/408 (3%)
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ F + +Y+RAG+L A+ + + + NT + +V ++L+ A + F
Sbjct: 231 RPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKA-VRF 289
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
L E++ + + N L+ C R + A+ + EM F+GC PD+ SY+ +M LC
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
++R+ E L+ M + D V Y T + L G +A++ L + + +
Sbjct: 350 EKRIKEVRLLMEKM---LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
K I C +G ++ AK ++NE +G IP + +Y+++ L E ++ + K+
Sbjct: 407 DKVGYSAIVHSFCREGR-MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 465
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEEMVKGTFVPTVRVYNILLK 375
L +M G P+ V Y A L L K+G EA E++ EE+ ++P Y++L+
Sbjct: 466 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW----WIPNAITYSVLMH 521
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G G S+ A +++M K+ G +L+ LC++ + EA R +E+ L
Sbjct: 522 GFRREGKSSEACDLVREMIKK-GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCA 580
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V + +I G C A+ L++M K PD+ +++++ ++
Sbjct: 581 VNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 628
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 197/467 (42%), Gaps = 42/467 (8%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+ I +L NR+ + +++M+ E + I+ Y +L +A+ L +
Sbjct: 272 TAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFK 331
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C S+ T++ + KE +++ +L + + + N + +L + D
Sbjct: 332 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 391
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL +E + + D+ Y ++ C + R+++A ++ MF KG D+V Y
Sbjct: 392 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF----SKGCIPDVVTYT 447
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+++ LC + K+ A ++L ++ + G K + C +G +E A+ ++N +
Sbjct: 448 SVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLE-AREMMNMSEE 506
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
IP+ +YS + EG+ E ++ EM KGF+P+ V + +L ++ VDE
Sbjct: 507 DWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 566
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSK--------- 395
A +E+ + G V V + ++ G C +A S + MYL
Sbjct: 567 AKRFMEQCLNNGCAVNVVN-FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTII 625
Query: 396 --------------------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+VG + TY ++ CR GR + ++LE+ML R
Sbjct: 626 DALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ-- 683
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
C YN +I LCS G +A L +++ A D + L+ S
Sbjct: 684 ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIES 730
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 198/459 (43%), Gaps = 46/459 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L + RI E++ ++++M DS D V + T + ++ G +EA+ +
Sbjct: 340 YYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 399
Query: 107 SQ----FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + V ++ ++ +E + E + +F + C + + +++ LC
Sbjct: 400 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI-----PDVVTYTSVINGLC 454
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------- 209
Q R+ D A + ++M GC P+ SY L+ GLC + EA ++
Sbjct: 455 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAI 514
Query: 210 -YSM----FWRISQKGSGEDIV-------IYRT------LLFALCDQGKIQDAMQILEKI 251
YS+ F R + D+V + T L+ +LC + K+ +A + +E+
Sbjct: 515 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC 574
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L G + C +D+E A SL+++ + P + +Y+ + L +GR
Sbjct: 575 LNNGCAVNVVNFTTVIHGFCQK-DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGR 633
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E K+ +M G P+ V Y + + G V++ L+++E+ + + YN
Sbjct: 634 IEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE---CRTAYN 690
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+++ LC GN A L K+ + + + T +L++ G L + V M
Sbjct: 691 QVIEKLCSFGNLEQAYKLLGKVLRTASKI-DANTCHMLIESYLSKGIPLMSYNVACRMFN 749
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
R+ P ++ + + L GK EA + + + ++
Sbjct: 750 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRI 788
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND-------GEDIEGAKSLINEALIRG 291
GK+++AM++L + + G++ DL CN G ++ A + I
Sbjct: 246 GKLRNAMRVLTMMQKAGIEP--------DLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 297
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +Y+ + + R+ + +++ EM KG P + Y + L K+ + E
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++E+ + +P YN + L G+ A+ +L++ ++ V + Y +V
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVH 416
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
CR+GR +A ++ EM + P V TY +I GLC K +A L +M P
Sbjct: 417 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 476
Query: 472 DISVWSSLVASVCCNTADL 490
+ +++L+ +C N L
Sbjct: 477 NTVSYTALLNGLCKNGNSL 495
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 184/407 (45%), Gaps = 20/407 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRS 141
F T I+ GQ+N+A+ L + + Q S+ TL+ + K A I +R
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLA-QGIKFDQVSYGTLINGVCKIGDTRGA-IKLVRK 189
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G K ++ N ++D LC+ + A +F EM +G D +Y L+ G C +
Sbjct: 190 IDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK 249
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L EA LL M K ++ Y L+ ALC +GK+++A +L +L+ +K
Sbjct: 250 LKEAIGLLNEMVL----KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPD-- 303
Query: 262 RRHRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
I DG +++ A+ + N + G P + SY+ + + E
Sbjct: 304 ---VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-TVRVYNILLKG 376
+ EM K P +V Y + + L K G + ++I+E +G +P V YN L+ G
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG--IPANVITYNSLIDG 418
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC G+ A+ KM Q G T+ IL+DGLC+ GR +A +++L + Y
Sbjct: 419 LCKNGHLDRAIALFNKMKDQ-GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHL 477
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V YNV+I G C G EA+ L +M +P+ + ++ ++
Sbjct: 478 DVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 191/398 (47%), Gaps = 8/398 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + GQ+ S+ + + T +F TL+K + + ++ A + F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA-LHFHDKLLAQG 159
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K S L++ +C+ + A+ + +++D + P+ E Y+ ++ LC + ++EA
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA- 218
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F ++ KG D+V Y TL++ C K+++A+ +L +++ K + + +
Sbjct: 219 ---YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ ++ AK+++ L P + +YS + + + + V + M G
Sbjct: 276 VDALCKEGK-VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + K+ MVDEAL + +E M + VP + Y+ L+ GLC +G +
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKE-MHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +M + G AN TY L+DGLC++G A + +M + PC T+ +L+
Sbjct: 394 WDLIDEMRDR-GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +A ++++++ D+ ++ ++ C
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 22/391 (5%)
Query: 106 LSQFN---CVNWTQ---SFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+SQFN C+ T FN +L K + + +H L L+ ++ + +LN
Sbjct: 44 VSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKG-----IQPDLITLN 98
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C + V ++ +G P ++ L+KGLC ++N+A H +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF----HDK 154
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G D V Y TL+ +C G + A++++ KI + L P + + +
Sbjct: 155 LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR-LTKPNVEMYNTIIDALCKYQ 213
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A L +E +G + +Y+ + ++ E +L+EM K P++ Y
Sbjct: 214 LVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYN 273
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA V+ M+K P V Y+ L+ G A MS
Sbjct: 274 ILVDALCKEGKVKEAKNVLAV-MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMS- 331
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+G + +Y IL++G C++ EA + +EM ++ P + TY+ LI GLC G+
Sbjct: 332 LMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++EM + ++ ++SL+ +C N
Sbjct: 392 YVWDLIDEMRDRGIPANVITYNSLIDGLCKN 422
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 39/354 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y ++I L + ++E + +M + T I + A +L EA+
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--FLRSCYGWEVKSRIQSLNLLM 158
L + ++N L+ + KE K+ EA ++L L++C VK + + + LM
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKAC----VKPDVITYSTLM 311
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW---- 214
D A HVF M G PD SY IL+ G C ++ ++EA +L M
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 215 -----------------RIS----------QKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
RIS +G +++ Y +L+ LC G + A+ +
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
K+ +G++ P S I L G ++ A+ + L +G + Y+ M
Sbjct: 432 FNKMKDQGIR-PCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+G + E +L +M G P+ V ++ + ALFK D+A +++ + + +G
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + + T L K K AL +FKE +K N Y+S+I L +S RI+ +
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ID+M+ + + I + G L+ A++LF + + +F LL +
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGL 454
Query: 126 VKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K +L+ A F L Y +V N++++ C+ + AL + +M+ GC
Sbjct: 455 CKGGRLKDAQEAFQDLLTKGYHLDV----YKYNVMINGHCKQGLLEEALTMLSKMEENGC 510
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
P+ ++ I++ L ++A LL M R
Sbjct: 511 VPNAVTFDIIINALFKKDENDKAEKLLRQMICR 543
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 177/367 (48%), Gaps = 8/367 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TLL + K + +A + LR + + N ++D LC+ + + A ++ E
Sbjct: 117 SYATLLNGLCKIGETRSA-LKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
MD +G +P+ +Y L+ G C +L EA LL M K ++ Y L+ ALC
Sbjct: 176 MDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL----KNINPNVYTYTILMDALC 231
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+GK+++A +L + ++G+K + + C GE ++ AK + + + +G P++
Sbjct: 232 KEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE-VQNAKQMFHTMVQKGVNPNV 290
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY+ M L R+ E +L E+ K P+ V Y + + K G + AL++++E
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+G V Y LL LC N A KM K+ G N TY L+DGLC+
Sbjct: 351 MYHRGQPADVV-TYTSLLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCKG 408
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR A ++ + +L++ V TYNV+I GLC G EA+ +M +PD +
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468
Query: 477 SSLVASV 483
++ S+
Sbjct: 469 EIIIRSL 475
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 178/372 (47%), Gaps = 14/372 (3%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
FN ++ +VK A LF + ++ + +LN+L++ C + + V ++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLF-KQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G P+ + + LMKGLC + ++ H ++ +G D V Y TLL LC
Sbjct: 72 LKLGYQPNTITLNTLMKGLCLKGEVKKSLHF----HDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
G+ + A+++L I + + + I C D + + A L +E RG P++
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKD-KLVNEAYDLYSEMDARGIFPNVI 186
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEVI 354
+YS + G+++E +L+EM K P++ Y + AL K+G V EA L V+
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E VK P V YN L+ G C G A M Q G N +Y I++D LC
Sbjct: 247 TKEGVK----PNVVSYNTLMDGYCLIGEVQNAKQMFHTMV-QKGVNPNVYSYNIMIDRLC 301
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R EA +L E+L ++ P TY+ LI G C +G+ A+ L+EM + + D+
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVV 361
Query: 475 VWSSLVASVCCN 486
++SL+ ++C N
Sbjct: 362 TYTSLLDALCKN 373
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 203/446 (45%), Gaps = 12/446 (2%)
Query: 42 RHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
R P+ + ++G L + + QM+ E I + GQ+ +
Sbjct: 5 RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
++ + + T + NTL+K + + +++ + + F + S L++
Sbjct: 65 FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKS-LHFHDKVVAQGFQMDQVSYATLLN 123
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + AL + + ++ + P+ Y+ ++ GLC D+ +NEA Y ++ + +
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA----YDLYSEMDAR 179
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIE 278
G +++ Y TL++ C G++ +A +L +++ K + P + I + C +G+ ++
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN-PNVYTYTILMDALCKEGK-VK 237
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
AK+L+ G P++ SY+ + G + ++ M KG P++ Y +
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K VDEA+ ++ E + K VP Y+ L+ G C G A+ LK+M + G
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHK-NMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR-G 355
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
A+ TY L+D LC++ +A+ + +M R P TY LI GLC G+ A
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQ 415
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+ ++ + ++ ++ +++ +C
Sbjct: 416 KLFQHLLVKGCRINVWTYNVMISGLC 441
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 179/385 (46%), Gaps = 8/385 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+AT + + G+ A+ L + + + +NT++ + K+ + A+ L+
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY-SEM 176
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + + L+ C + A + EM + P+ +Y ILM LC + ++
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKV 236
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA +LL M +++G ++V Y TL+ C G++Q+A Q+ +++KG+ P
Sbjct: 237 KEAKNLLAVM----TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN-PNVY 291
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I + + ++ A +L+ E L + +P+ +YS++ GRI +L EM
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G +V Y + L AL K+ +D+A + + +G P Y L+ GLC G
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-IQPNKYTYTALIDGLCKGGR 410
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + + + GC N TY +++ GLC++G EA + +M P T+
Sbjct: 411 HKNAQKLFQHLLVK-GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFE 469
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQ 467
++IR L + +A L EMI++
Sbjct: 470 IIIRSLFEKDQNDKAEKLLHEMIAK 494
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 210/439 (47%), Gaps = 15/439 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L R+++ + + ++M + T + + + G+L+EA+ +F
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ V ++N L+ K KL+ A + R + + + N L++ LC+ R
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV-SENLVPDVVTYNSLVNGLCKNGRV 131
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCND-RRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + + F P+ +Y L+ GLC + R ++EA L F + ++G ++
Sbjct: 132 DEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKL----FGSVLKQGYEPEVP 184
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L + ++ +A ++ +++ GL+ P + + + + +E A ++ +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLE-PDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G +P + S++A+ L E R+ E + +L M KG P+ + + + + G
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA---GNSAVAVMYLKKMSKQVGCVANG 403
+A+ +E M+K PTV YNIL+ GLC A G A+ M ++ G V +
Sbjct: 304 WKKAMTTFKE-MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK-GRVPDV 361
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+DGL + G+ +A R+L M + P V TYN LI GLC + K EA+
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421
Query: 464 MISQAKLPDISVWSSLVAS 482
M+ + +PD + +++++
Sbjct: 422 MVEKGCVPDTITYGTIISA 440
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 195/396 (49%), Gaps = 15/396 (3%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
G++++A +L++ + + ++NTLL K +L+ A +F + V +
Sbjct: 23 GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPD-VV 81
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L++ C+ + D A + Q M + PD +Y+ L+ GLC + R++EA L
Sbjct: 82 TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---- 137
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGK-IQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
I KG +++ Y TL+ LC + + + +A+++ +L++G + P+ + I +
Sbjct: 138 ---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE-PEVPTYNILIDGL 193
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ + A L + + G P +Y+ L GR+ + +L +M KG P +
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V + A + L K+ VDEA EV+ M P +N L+ G C AG A+ K
Sbjct: 254 VSHNAVINGLCKEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK 312
Query: 392 KMSKQVGCVANGETYGILVDGLCR---DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+M K+ G TY ILVDGLC+ +GR EA + + M+ + P V TY+ LI GL
Sbjct: 313 EMLKR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GK +A L M ++ +P++ ++SL++ +C
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 82/377 (21%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G +P+R +Y+ L+ GLCN R+++A +++ R+ + G D+V Y TLL C
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQ----ALYERMIKAGYSPDVVTYNTLLHGFC 56
Query: 237 DQGKIQDAMQILEKILRKGL---------------KAPK-SRRHRI-------DLCP--- 270
G++ +A++I + +++G KA K RI +L P
Sbjct: 57 KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116
Query: 271 ---------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR-IVEGDKVLD 320
C +G ++ A+ LI + +G P++ +YS + L E R + E K+
Sbjct: 117 TYNSLVNGLCKNGR-VDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFG 172
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ +G+ P + Y + L K+ V+EA E+ +VK P Y + + GLC A
Sbjct: 173 SVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELF-SGLVKHGLEPDAITYTVFIDGLCKA 231
Query: 381 GNSAVAVMYLKKMSKQ----------------------------------VGCVANGETY 406
G A++ LK M ++ GC N ++
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI---GKQYEAVMWLEE 463
L+ G CR G++ +A +EML R P V TYN+L+ GLC G+ EA+ +
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351
Query: 464 MISQAKLPDISVWSSLV 480
MI + ++PD+ +S+L+
Sbjct: 352 MIEKGRVPDVVTYSALI 368
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
MR GFWP+ + Y A L+ L G + +A + + E M+K + P V YN LL G C G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDA-QALYERMIKAGYSPDVVTYNTLLHGFCKVG 59
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ K+ G V + TY L++G C+ + EA R+L+ M+ + P V TY
Sbjct: 60 ELDEALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY 118
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N L+ GLC G+ EA M + + + P++ +S+L++ +C
Sbjct: 119 NSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLC 158
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 6 PRLLT-PTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P ++T T +S + ++ + ALK+F ++ Y P Y +I L + +R+ E
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQ--GYEPEVPTYNILIDGLLKEDRVNEA 202
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
E+ + E + I +AG++ +A+ + K++ + CV S N ++
Sbjct: 203 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 262
Query: 125 MVKESKLEAAHILFLRSCYGWEVKS---RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ KE +++ A +L G E K S N L+ C+ + A+ F+EM +G
Sbjct: 263 LCKEKRVDEAEVLL----SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 182 CYPDRESYHILMKGLCNDR---RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
P +Y+IL+ GLC R R+ EA L +M +KG D+V Y L+ L
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI----EKGRVPDVVTYSALIDGLGKA 374
Query: 239 GKIQDAMQILEKILRKG 255
GK+ DA ++L + KG
Sbjct: 375 GKLDDARRLLGAMEAKG 391
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K F P YN LL GLC+ G + A ++M K G + TY L+ G C+ G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVG 59
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
EA ++ + + R + P V TYN LI G C K EA L+ M+S+ +PD+ ++
Sbjct: 60 ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119
Query: 478 SLVASVCCN 486
SLV +C N
Sbjct: 120 SLVNGLCKN 128
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 192/406 (47%), Gaps = 14/406 (3%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G+L+EA+ LF +L C + L++E+ K + E + +++ R
Sbjct: 13 GKLDEALELFHSLVSDGC---GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER-HL 68
Query: 154 LNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+N+ +D LC+ D A FQE+ DF+G + SY+IL+ C +R++EA L
Sbjct: 69 VNITIDSLCKSDMIDKAESWFQELKDFRG-LVNTVSYNILINAFCKTKRIDEAIQL---- 123
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F + G Y TL+ LC ++ +A Q E++L G A + + C
Sbjct: 124 FGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCK 183
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ + A L+NE + RGG+ + A Y+ + L+ +G+I E + + M G P V
Sbjct: 184 -ADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEV 242
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ + L K V A E+ + G P+V + + L+ G C G A +
Sbjct: 243 TFTVLIDGLCKANRVARAKEIFFSYLESGG-SPSVVICSCLMDGFCKYGGVDEAWRIFEL 301
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M+ + GC N + IL++GLC+ R +A V EE++ R P V TY+ + GLC
Sbjct: 302 MTNR-GCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAH 360
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
+ +A L ++ + PD+ ++++L++ + C+ L+ RK E
Sbjct: 361 RVDQARQVLCMLVDKGGTPDVVMYTALISGL-CSLGRLDEARKVFE 405
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 189/471 (40%), Gaps = 55/471 (11%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
A ++ L ++ E E+ + D C + +R ++AG+ E + + K +
Sbjct: 3 ADIVLCLCHVGKLDEALELFHSLVSDGCGLPADLL---VRELSKAGRAEECLKVVKLMLD 59
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ N + + K ++ A F L+ G S N+L++ C+ +R
Sbjct: 60 RQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGL---VNTVSYNILINAFCKTKR 116
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ +F EM GC P +Y+ L+ GLC RL EA + R+ G+G +
Sbjct: 117 IDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQF----YERLLSSGAGASFI 172
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG---LKAP----------KSRRHRIDL----- 268
Y L+ C ++ +A+++L +++ +G AP K + H +L
Sbjct: 173 TYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRM 232
Query: 269 -------------------CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
C N + AK + L GG PS+ S +
Sbjct: 233 EKDGVRPQEVTFTVLIDGLCKANR---VARAKEIFFSYLESGGSPSVVICSCLMDGFCKY 289
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + E ++ + M +G P+ V + L K + +A EV EE +VK P V
Sbjct: 290 GGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE-VVKRQAKPDVVT 348
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE-E 428
Y+ + GLC A A L + + G + Y L+ GLC GR EA +V E +
Sbjct: 349 YSTFMDGLCRAHRVDQARQVLCMLVDKGG-TPDVVMYTALISGLCSLGRLDEARKVFEVD 407
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
M P T NVL+ G G+ EA + + + PD +S++
Sbjct: 408 MRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 150/368 (40%), Gaps = 16/368 (4%)
Query: 15 SQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGD 74
S +I K +S LK F+ N Y +I ++ RI E ++ +MK
Sbjct: 79 SDMIDKAESWFQELKDFRGLV--------NTVSYNILINAFCKTKRIDEAIQLFGEMKAP 130
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EA 133
C S + T I R +L EA ++ L ++N L+ K ++ EA
Sbjct: 131 GCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEA 190
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+L G V S N ++D L + + A F M+ G P ++ +L+
Sbjct: 191 VELLNELVARGGVVTS--APYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLI 248
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC R+ A + +S + G +VI L+ C G + +A +I E +
Sbjct: 249 DGLCKANRVARAKEIFFSYL----ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTN 304
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+G P I + + + A+ + E + R P + +YS L R+
Sbjct: 305 RGC-TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVD 363
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+ +VL + KG P +VMY A ++ L G +DEA +V E +M P N+L
Sbjct: 364 QARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVL 423
Query: 374 LKGLCDAG 381
+ G AG
Sbjct: 424 VNGFGLAG 431
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 189/410 (46%), Gaps = 20/410 (4%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S + +R R +L++++ LF ++ Q + F+ LL + K K +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV------ 100
Query: 141 SCYGWE------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
Y WE + + + N+L++ C+C + LAL +M G P ++ L+
Sbjct: 101 -IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C R+ +A + MF ++ G ++VIY T++ LC ++ +A+ +L ++ +
Sbjct: 160 GFCRGDRVYDALY----MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ + + C+ G A +++ R P + +++A+ EGR+ E
Sbjct: 216 GIGPDVVTYNSLISGLCSSGR-WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ +EM + P +V Y + L +DEA E+ + KG F P V Y+IL+
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILI 333
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C + + +MS Q G V N TY IL+ G CR G+ A + M+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYNVL+ GLC GK +A++ L +M DI ++ ++ +C
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 8/398 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ + ++ + + + L++ + + + N LL + S+L A + FL
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA-LSFLGKM 142
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ I + L++ C+ R AL++F +M G P+ Y+ ++ GLC +++
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL R+ + G G D+V Y +L+ LC G+ DA +++ + ++ + P
Sbjct: 203 DNALDLLN----RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI-YPDVF 257
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C + A+ E + R P + +YS + L R+ E +++ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+KG +P +V Y + K V+ +++ E +G TV Y IL++G C AG
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV-TYTILIQGYCRAGK 376
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VA ++M G N TY +L+ GLC +G+ +A +L +M + TYN
Sbjct: 377 LNVAEEIFRRMV-FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++IRG+C G+ +A + Q +PDI +++++
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 176/386 (45%), Gaps = 8/386 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + R QL+ A+S + + +F +LL + ++ A +F G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF-DQMVGMG 181
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
K + N ++D LC+ ++ D AL + M+ G PD +Y+ L+ GLC+ R ++AT
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++ M +++ D+ + L+ A +G++ +A + E+++R+ L P + +
Sbjct: 242 RMVSCM----TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD-PDIVTYSL 296
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ ++ A+ + + +G P + +YS + ++ G K+ EM +G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ V Y + + G ++ A E+ + G P + YN+LL GLCD G A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH-PNIITYNVLLHGLCDNGKIEKA 415
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ L M K G A+ TY I++ G+C+ G +A + + + P + TY ++
Sbjct: 416 LVILADMQKN-GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPD 472
GL G + EA +M LP+
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPN 500
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 33/321 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ N +Y ++I L +S ++ +++++M+ D + + I +G+ ++A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ +++ +FN L+ VKE ++ A F + I + +LL+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE-EFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------- 212
LC R D A +F M +GC+PD +Y IL+ G C +++ L M
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 213 -----------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
F R+ G +I+ Y LL LCD GKI+ A+ IL
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+ + G+ A + I C GE + A + +G +P + +Y+ M + LY +
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGE-VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 310 GRIVEGDKVLDEMRTKGFWPS 330
G E D + +M+ G P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 195/432 (45%), Gaps = 23/432 (5%)
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCV 112
G L E+ R+ E ++ C A I+ +G+ EA + + C
Sbjct: 70 GDLEEAIRLVESMAGLEPSAAGPC-------AALIKKLCASGRTAEARRVLAS-----CE 117
Query: 113 NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
S+N ++ +L+ A R ++ + N L+ LC R+D AL
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNAR----RLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALA 173
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
V +M +GC PD +Y IL++ C +A LL M KG DIV Y ++
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM----RDKGCAPDIVTYNVVV 229
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
+C +G++ DAM+ L+ + G + P + + I L E E A+ L+ E +G
Sbjct: 230 NGICQEGRVDDAMEFLKSLPSYGCE-PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++ +++ + L G + ++LD++ G P+ + Y L A K +D A+
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+E + G + P + YN LL LC G AV L ++ K GC +Y ++DG
Sbjct: 349 FVELMVSSGCY-PDIVSYNTLLTALCRGGEVDAAVELLHQL-KDKGCTPVLISYNTVIDG 406
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
L + G+ EA +L EM+ + P + TY+ + GLC G+ EA+ ++ P+
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPN 466
Query: 473 ISVWSSLVASVC 484
++++++ +C
Sbjct: 467 TVLYNAILLGLC 478
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 8/387 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T IR G+ + A+++ ++ + CV ++ LL+ K S + A + L
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA-VKLLDE 212
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N++++ +CQ R D A+ + + GC P+ SY+I++KGLC R
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A L+ M S+KG ++V + L+ LC +G ++ AM+IL++I + G P S
Sbjct: 273 WEDAEKLMAEM----SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC-TPNS 327
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ L + ++ A + + + G P + SY+ + L G + ++L +
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
++ KG P L+ Y + L K G +EALE++ E + KG P + Y+ + GLC G
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG-LQPDIITYSTISSGLCREG 446
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ K+ + +G N Y ++ GLC+ A + M+ P TY
Sbjct: 447 RIEEAIKAFCKV-QDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTY 505
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQA 468
+LI GL G EA + E+ S+
Sbjct: 506 TILIEGLAYEGLVKEAREMMAELCSRG 532
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 7/316 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D+M+ C + + + G++++A+ K+L + C T S+N +LK +
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ E A L + + N+L+ LC+ + A+ + ++ GC P+
Sbjct: 268 CTAERWEDAEKLMAEMSRKGR-PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+ ++ C ++++ A + M G DIV Y TLL ALC G++ A+
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMV----SSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L ++ KG P + + E A L+NE + +G P + +YS ++
Sbjct: 383 ELLHQLKDKGC-TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSG 441
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L EGRI E K +++ G P+ V+Y A L L K A+++ MV +P
Sbjct: 442 LCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLF-TYMVSNGCMP 500
Query: 366 TVRVYNILLKGLCDAG 381
Y IL++GL G
Sbjct: 501 NESTYTILIEGLAYEG 516
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + E++DQ+ C + + + + +++ A++ + +
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA----HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C S+NTLL + + +++AA H L + C + S N ++D L + +
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC-----TPVLISYNTVIDGLTKAGK 412
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ AL + EM +G PD +Y + GLC + R+ EA F ++ G + V
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK----AFCKVQDMGIRPNTV 468
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG 255
+Y +L LC + A+ + ++ G
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNG 497
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 11/255 (4%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNY--RHNGPVYASMIGILSESNRI 61
R P ++T L + ++ A++I ++ P Y N Y ++ + ++
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEIL----DQIPKYGCTPNSLSYNPILHAFCKQKKM 343
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
++ M C + T + R G+++ AV L L C S+NT+
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 403
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ + K K E A + L ++ I + + + LC+ R + A+ F ++ G
Sbjct: 404 IDGLTKAGKTEEA-LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
P+ Y+ ++ GLC R ATH +F + G + Y L+ L +G +
Sbjct: 463 IRPNTVLYNAILLGLCKRR----ATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLV 518
Query: 242 QDAMQILEKILRKGL 256
++A +++ ++ +G+
Sbjct: 519 KEAREMMAELCSRGV 533
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 200/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 83 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A L L ++++ + N ++D LC+ R D
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 257
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMV 316
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P L +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 377 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 434
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Query: 469 KLPDISVWSSLV 480
LPD +++L+
Sbjct: 495 PLPDSGTYNTLI 506
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 183/399 (45%), Gaps = 8/399 (2%)
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEV 147
++ + +L++A+ LF + + + FN LL + K K + + L
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ I +L+ L++ C +R A+ + +M G PD ++ L+ GL + +EA
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ R+ Q+G ++V Y ++ LC +G I A +L K+ ++A + I
Sbjct: 136 LVD----RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C ++ A +L E +G P++ +YS++ L + GR + ++L +M K
Sbjct: 192 DSLCK-YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 250
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+LV + A + A K+G EA E + ++M+K + P + YN L+ G C A
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ M + C + +TY L+ G C+ R + + + EM R TY LI+G
Sbjct: 310 QMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L G A ++M+S PDI +S L+ +C N
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 407
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 202/458 (44%), Gaps = 43/458 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+IG L + N +V+ ++K + + F+ I Y+ AG +AV F + F+
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C +FN +L +V++ A ++ + C + + + +L+ LC+ ++
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC---NLNPDVVTYGILIHGLCKTCKTQ 215
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL +F EM +G P++ Y I++ GLC +++ +A L F ++ G D++ Y
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL----FSKMRASGCNRDLITY 271
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL----CPCND---GEDIEGAK 281
LL C G + DA +L+ + + G H + + C N E A
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDG--------HILGVIGYGCLINGLFRARRYEEAH 323
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ L P + Y+ M L EGR+ E +L EM +G P + Y A +
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G +DEA E + E+ K P Y+IL+ G+C G A K+M K +GC+
Sbjct: 384 CDMGYLDEA-ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK-LGCLP 441
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEM-LIRSYWPC--------------VETYNVLIR 446
+ T+ L++GLC+ R EA + +M ++R P + + V++
Sbjct: 442 SVVTFNSLINGLCKANRLEEARLLFYQMEIVRK--PSLFLRLSQGTDKVFDIASLQVMME 499
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G +A L +++ LPDI ++ L+ C
Sbjct: 500 RLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 31/408 (7%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E ++ N +Y+ ++ L ++ +I + + + +M+ C +
Sbjct: 217 ALVLFDEMTDR--GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + ++G L++A +L + L++ + + L+ + + + E AH+ + +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY-QKMLREN 333
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + +++ L Q R AL + EM +G PD Y+ L+KG C+ L+EA
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHR 265
S+ IS+ + Y L+ +C G I A I +++ + G L + +
Sbjct: 394 ----SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449
Query: 266 ID-LCPCNDGEDIEGAKSLINEA-LIRGGIPSL--------------ASYSAMAIDLYNE 309
I+ LC N +E A+ L + ++R PSL AS M L
Sbjct: 450 INGLCKANR---LEEARLLFYQMEIVRK--PSLFLRLSQGTDKVFDIASLQVMMERLCES 504
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G I++ K+L ++ G P + Y + K G ++ A ++ +E +KG +P
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG-HMPDSVT 563
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
Y L+ GL AG + A+ ++M K+ GCV TY ++ CR+
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKK-GCVPESSTYKTIMTWSCREN 610
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 184/454 (40%), Gaps = 57/454 (12%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
P H+ Y S ++ S ++ + E +D M E V ++ IR+Y L E
Sbjct: 19 PTLFHS---YHSRTNPIATSIEVSTIIETLDPM-----EDGLKVISSRIRSYTITSVLQE 70
Query: 99 A--VSLFKNLSQFNCVNWTQSFNT----LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
L L ++ +W T ++ +++KE+ E + L+ +K +
Sbjct: 71 QPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFEL-YWKVLQELKNSAIKISSE 129
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L++ + + A+ F M C PD ++++++ L EA L ++
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVR----KEAFLLALAV 185
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ ++ + D+V Y L+ LC K QDA+
Sbjct: 186 YNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL--------------------------- 218
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
L +E RG +P+ YS + L +I + ++ +MR G L+
Sbjct: 219 ---------VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L K G +D+A +++ + K + V Y L+ GL A A M+ +K
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQL-LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + Y I++ GL ++GR EA +L EM R P YN LI+G C +G
Sbjct: 329 MLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EA E+ P+ +S L+ +C N
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 19/272 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++ T + + + ++ AL + E E+ R + Y ++I + + E +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTER--GLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ C + ++ I + G +N+A +FK + + C+ +FN+L+ +
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453
Query: 126 VKESKLEAAHILF------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
K ++LE A +LF LR G + I SL ++M+ LC+ A +
Sbjct: 454 CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
++ G PD +Y+IL+ G C +N A + +F + KG D V Y TL+
Sbjct: 514 LMQLVDSGVLPDIRTYNILINGFCKFGNINGA----FKLFKEMQLKGHMPDSVTYGTLID 569
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L G+ +DA++I E++++KG P+S ++
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGC-VPESSTYK 600
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDS--------CECKDSVFATA-----IRTYARA 93
+ S+I L ++NR+ E + + QM+ + D VF A + +
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCES 504
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G + +A L L + +++N L+ K + A LF + + +
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSV-T 563
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
L+D L + R++ AL +F++M +GC P+ +Y +M C + ++ A
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 179/376 (47%), Gaps = 12/376 (3%)
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
FN NW N + KE ++ A L L G K + L+ LC+ ++
Sbjct: 61 FNLPNWRVGRN---DQKGKELRIYDA-FLHLEYLVGKGQKPEVNQATQLLYDLCKFNKAR 116
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A+ V + M G PD SY L+ LC + A L+ M G + V Y
Sbjct: 117 KAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKM----EGHGFPTNTVTY 172
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ LC G + ++Q+L+++ +KGL P + + L ++ A L+++ +
Sbjct: 173 NTLVKGLCMHGNLNQSLQLLDRLTKKGL-IPNAFTYSFLLEAAYKERGVDEAMKLLDDII 231
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+GG P+L SY+ + L EGR E K+ E+ KGF PS+V + L +L +G +
Sbjct: 232 AKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWE 291
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA E++ EM K P+V YNIL+ L G + A L +M++ G A+ +Y
Sbjct: 292 EANELL-AEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRS-GFKASATSYNP 349
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++ LC++G+ + L++M+ R P TY+ I L GK EA ++ + S+
Sbjct: 350 IIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQ 408
Query: 469 KLPDISVWSSLVASVC 484
P + +L+AS+C
Sbjct: 409 NFPMHDFYKNLIASLC 424
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 194/433 (44%), Gaps = 44/433 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + + +++++M+G + T ++ G LN+++ L L+
Sbjct: 137 YTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLT 196
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + +++ LL+ KE ++ A L L + + S N+L+ LC+ R+
Sbjct: 197 KKGLIPNAFTYSFLLEAAYKERGVDEAMKL-LDDIIAKGGEPNLVSYNVLLTGLCKEGRT 255
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A+ +FQE+ +G P S++IL++ LC + R EA LL M ++ +V
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEM----DKEDQPPSVVT 311
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +L G+ + A ++L+++ R G KA
Sbjct: 312 YNILITSLSLNGRTEQAFKVLDEMTRSGFKA----------------------------- 342
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
S SY+ + L EG++ K LD+M + P+ Y A ++ L + G V
Sbjct: 343 -------SATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQGKV 394
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA +I+ K F P Y L+ LC GN+ A L +M+K G + TY
Sbjct: 395 QEAFFIIQSLGSKQNF-PMHDFYKNLIASLCRKGNTYPAFQMLYEMTK-YGFTPDSYTYS 452
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ G+CR+G EA ++ + + P ++ YN LI G C + ++ M+++
Sbjct: 453 SLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNK 512
Query: 468 AKLPDISVWSSLV 480
+P+ + ++ LV
Sbjct: 513 GCVPNENTYTILV 525
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 6/283 (2%)
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-KAPKSRRHRIDLCPCNDGEDI 277
KG ++ LL+ LC K + A++++E ++ G+ S H ++ C G ++
Sbjct: 93 KGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFL-CKRG-NV 150
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A L+ + G + +Y+ + L G + + ++LD + KG P+ Y
Sbjct: 151 GYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFL 210
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L A +K+ VDEA++++++ + KG P + YN+LL GLC G + A+ +++ +
Sbjct: 211 LEAAYKERGVDEAMKLLDDIIAKGG-EPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVK- 268
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + ++ IL+ LC +GR+ EA+ +L EM P V TYN+LI L G+ +A
Sbjct: 269 GFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQA 328
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
L+EM + ++ ++A + C +++ K L+Q+
Sbjct: 329 FKVLDEMTRSGFKASATSYNPIIARL-CKEGKVDLVLKCLDQM 370
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+I DA LE ++ KG K ++ ++ DLC N A ++ + G IP A
Sbjct: 79 RIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARK---AVRVMEMMVGSGIIPDAA 135
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SY+ + L G + +++++M GF + V Y + L G ++++L++++
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
KG +P Y+ LL+ A+ L + + G N +Y +L+ GLC++G
Sbjct: 196 TKKG-LIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAK-GGEPNLVSYNVLLTGLCKEG 253
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA ++ +E+ ++ + P V ++N+L+R LC G+ EA L EM + + P + ++
Sbjct: 254 RTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYN 313
Query: 478 SLVASVCCN 486
L+ S+ N
Sbjct: 314 ILITSLSLN 322
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 214/473 (45%), Gaps = 48/473 (10%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
++IK ++ P AL IF E+ + HN YAS+I L++ + + V+ QM D+
Sbjct: 55 KLIKNERDPQHALDIFNMVSEQ-QGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDT 113
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAA 134
C+ + +F ++ ++++ + +F + + ++ +T L +V+ +++ A
Sbjct: 114 CKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLA 173
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEM-DFQGCYPDRESYHI 191
L + + ++ N+L V CR DL A V +EM + YP+ +Y
Sbjct: 174 RKLLVNARSKLNLRPNTCIFNIL--VKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYST 231
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ GLC + +L EA M +S+ D + Y L+ C +GK+ A ILE +
Sbjct: 232 LIGGLCENGKLKEAIEFFEEM---VSKDNILPDALTYNILINGFCQRGKVDRARTILEFM 288
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
G C+ P++ +YS + EGR
Sbjct: 289 KSNG---------------CS---------------------PNVFNYSVLMNGYCKEGR 312
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ E +V +E+++ G P + Y + L + G VDEA E++++ K TV +N
Sbjct: 313 LQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTV-TFN 371
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++L GLC G A+ ++K+ + G N +Y I+++ L + G +A+ +L ML
Sbjct: 372 VMLGGLCREGRFDEALDMVQKLPFE-GFYLNKGSYRIVLNFLTQKGELRKATELLGLMLN 430
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R + P T N L+ LC+ G +AV L ++ P+ W +LV +C
Sbjct: 431 RGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLIC 483
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PSL + S L R+ K+L R+K P+ ++ + ++G + A E
Sbjct: 152 PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFE 211
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V++E P + Y+ L+ GLC+ G A+ + ++M + + + TY IL++G
Sbjct: 212 VVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ G+ A +LE M P V Y+VL+ G C G+ EA E+ S PD
Sbjct: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPD 331
Query: 473 ISVWSSLVASVCCNTADLNVCRKTLEQL 500
+++L+ + C T ++ + L+Q+
Sbjct: 332 TISYTTLI-NCLCRTGRVDEATELLQQM 358
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 214/450 (47%), Gaps = 25/450 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ LS+++ +T + D M D + +R G EA+S+ +++
Sbjct: 159 YNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMR 217
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++NTL+ + +++ A L G +K + + N +++ +C+ +
Sbjct: 218 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG-LKPNLVTFNSMVNGMCKAGKM 276
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A VF EM +G PD SY+ L+ G C +H S+F ++QKG D+V
Sbjct: 277 EDARKVFDEMVREGLAPDGVSYNTLVGGYCK----AGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ +L+ +C G ++ A+ ++ ++ +GL+ + + DG +G +++A
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQM-----NEVTFTALIDGFCKKG---FLDDA 384
Query: 288 L--IRGGI-----PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L +RG PS+ Y+A+ GR+ E ++L EM KG P +V Y ++A
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+ A E+ ++ + KG +P Y+ L++ LC + A + K M K +G
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGV-LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIK-LGLQ 502
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+DG C++G A + ++M+ P V TY+VLI GL + EA
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADL 490
L ++ + +P + + +L+ CC A+L
Sbjct: 563 LFKLYHEDPIPANTKYDALMH--CCRKAEL 590
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 188/448 (41%), Gaps = 56/448 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ SM+ + ++ ++ + ++V D+M + + T + Y +AG +EA+S+F +
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+Q + +F +L+ M K LE A + +R ++ + L+D C+
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERA-VTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL + M P Y+ L+ G C R++EA LL+ M KG D+V
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM----EAKGLKPDVV 436
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ A C A ++ +++L KG+
Sbjct: 437 TYSTIISAYCKNCDTHSAFELNQQMLEKGV------------------------------ 466
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+P +YS++ L E R+ + + M G P Y + + K+G
Sbjct: 467 ------LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+ AL + ++MVK +P V Y++L+ GL + + A L K+ + AN +
Sbjct: 521 VESALS-LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579
Query: 407 GI--------------LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ L+ G C G EA +V + ML R++ Y+VLI G C G
Sbjct: 580 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 639
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A+ + ++M+ P+ + SL+
Sbjct: 640 NVMKALSFHKQMLQGGFAPNSTSTISLI 667
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 3/194 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G +PS+ +Y+A+ + L ++ + + D M + G P++ Y + AL G EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L ++ + G P V YN L+ AG A L M ++ G N T+ +V
Sbjct: 210 LSILRDMRGAGCG-PNVVTYNTLVAAFFRAGEVDGA-ERLVGMMREGGLKPNLVTFNSMV 267
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+G+C+ G+ +A +V +EM+ P +YN L+ G C G +EA+ EM + +
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327
Query: 471 PDISVWSSLVASVC 484
PD+ ++SL+ +C
Sbjct: 328 PDVVTFTSLIHVMC 341
>gi|242046988|ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
gi|241924617|gb|EER97761.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
Length = 551
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 213/478 (44%), Gaps = 31/478 (6%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++++++ TA++ + A+ + P + H A ++ +L + + E +
Sbjct: 93 LDPFVVNRVLRSVSDSETAVQFYWWAESR-PGFDHTQFAIAYIVSLLFIDSNFFLLSEFL 151
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++++ S++ + Y RAG+ + + F + C + +N + +VK
Sbjct: 152 ERVRSQGVTLHRSLYRILLSGYVRAGKFDSVIQTFDEMVTSGCREFGVDYNRFIGVLVKN 211
Query: 129 SKLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + YG + + + + LCQ R +L + +MD GC+P
Sbjct: 212 CCFD-----LVEKYYGVALDKGFCLTSFTYSRWISALCQSDRIELVERLLADMDKFGCFP 266
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D + +I + LC RL++A +L +M +G+G D+V Y T++ LCD + +A
Sbjct: 267 DIWACNIYVDYLCKQNRLHDALMMLENM----EMRGTGPDVVTYTTIVGCLCDNKQFAEA 322
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++ E+++R+G+K D+ C G I G L + GG + S + +
Sbjct: 323 VELWEEMMRRGVKP--------DIISC--GVLIFG---LCKNHMEVGGFCDIVSCNILID 369
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
++ K+ EM KG V Y + L+ G + A E+ E+M+K V
Sbjct: 370 AFCKAKKVTSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYCNLAEEIF-EQMLKAQVV 428
Query: 365 PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V +YNI+L LC AG A ++L+ + K+V + T+ L+ L + R +EA
Sbjct: 429 PNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVS--PDVITFNTLIYWLGKSSRAIEAV 486
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ +M R P T+ LI GL GK A E M+ + D V L++
Sbjct: 487 DLFRDMRARGVEPDSLTFRYLISGLLEEGKATLAYEVWEYMMENGIILDRDVSDRLIS 544
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE + L+ + G P + + + L + R+ + +L+ M +G P +V Y
Sbjct: 249 IELVERLLADMDKFGCFPDIWACNIYVDYLCKQNRLHDALMMLENMEMRGTGPDVVTYTT 308
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L + EA+E+ EE M +G P + +L+ GLC K +
Sbjct: 309 IVGCLCDNKQFAEAVELWEEMMRRGV-KPDIISCGVLIFGLC-------------KNHME 354
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
VG + + IL+D C+ + A ++ +EM + TY LI GL +G
Sbjct: 355 VGGFCDIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYCNL 414
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A E+M+ +P++++++ ++ ++C
Sbjct: 415 AEEIFEQMLKAQVVPNVNLYNIMLHNLC 442
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ DEM T G V Y + L K+ D + + KG F T Y+ +
Sbjct: 184 QTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYGVALDKG-FCLTSFTYSRWISA 242
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + + L M K GC + I VD LC+ R +A +LE M +R P
Sbjct: 243 LCQSDRIELVERLLADMDK-FGCFPDIWACNIYVDYLCKQNRLHDALMMLENMEMRGTGP 301
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
V TY ++ LC + EAV EEM+ + PDI L+ +C N ++
Sbjct: 302 DVVTYTTIVGCLCDNKQFAEAVELWEEMMRRGVKPDIISCGVLIFGLCKNHMEVG 356
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 200/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A L L ++++ + N ++D LC+ R D
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 258
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMV 317
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P L +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 378 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 435
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 469 KLPDISVWSSLV 480
LPD +++L+
Sbjct: 496 PLPDSGTYNTLI 507
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 197/442 (44%), Gaps = 43/442 (9%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y +I ++I+ ++ +M E ++ + Y ++++AV+L
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + T +F TL+ H LFL +
Sbjct: 103 VDQMVEMGYRPDTITFTTLI------------HGLFLHN--------------------- 129
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
++ A+ + M +GC P+ +Y +++ GLC ++ A +LL M
Sbjct: 130 ---KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM----EAAKIE 182
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+VI+ T++ +LC + DA+ + +++ KG++ + C C+ G A
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSDASQ 241
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ + + P+L +++A+ EG+ VE +K+ D+M + P + Y + +
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+D+A ++ E + K F P + YN L+KG C + ++MS + G V +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGD 359
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+ GL DG A +V ++M+ P + TY++L+ GLC+ GK +A+ +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M DI ++++++ +C
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMC 441
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 187/407 (45%), Gaps = 14/407 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + + ++N L+ + S++ A L +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 73 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ Q+G ++V Y ++ LC +G I A +L K+ ++A
Sbjct: 131 ASEAVALV----DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I LC +D A +L E +G P++ +YS++ L + GR + ++L
Sbjct: 187 IFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M K P+LV + A + A K+G EA E + ++M+K + P + YN L+ G C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + M + C + +TY L+ G C+ R + + + EM R
Sbjct: 303 HDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI+GL G A ++M+S PDI +S L+ +C N
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 13/343 (3%)
Query: 147 VKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
VKSR I N L+ + + ++ DL + + ++M G + +Y+IL+ C ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL M + G IV +LL C +I DA+ ++++++ G + P +
Sbjct: 62 SLALALLGKMM----KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTI 116
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ A +L++ + RG P+L +Y + L G I +L++M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+V++ + +L K VD+AL + +E KG P V Y+ L+ LC G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGR 235
Query: 383 SAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A L M K++ N T+ L+D ++G+F+EA ++ ++M+ RS P + TY
Sbjct: 236 WSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N LI G C + +A E M+S+ PD+ +++L+ C
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I +R+ + K++ + M C + T I+ + ++ ++ + LF+ +
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S V T ++ TL++ + + + A +F + V I + ++L+D LC +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF-KQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL VF M D Y +++G+C ++++ + +F +S KG ++V
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG----WDLFCSLSLKGVKPNVV 466
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG 255
Y T++ LC + +Q+A +L+K+ G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDG 495
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 184/375 (49%), Gaps = 24/375 (6%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TL+ + + + +AA + LR G V+ + + ++D +C+ + + A ++ E
Sbjct: 165 SYGTLINGLCRVGETKAA-VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M + PD +Y L+ G C +L A L F R+ ++ + L+ C
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDL----FNRMISDNINPNVYTFSILIDGFC 279
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALI 289
+GK+++A +L +++K +K +D+ N DG + + AKSL N
Sbjct: 280 KEGKVREAKNVLAVMMKKNVK--------LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P + SYS M + E K+ +EM K +P++V Y + + L K G
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSC 391
Query: 350 ALEVIEEEMVKGTFVPT-VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
ALE+++E +G P+ + YN +L +C + A++ L K+ K+ G + TY +
Sbjct: 392 ALELVDEMHDRGQ--PSNIITYNSILDAICKNNHVDKAIVLLTKI-KEKGIQPDIFTYTV 448
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L++GLC+ GR +A +V E++L++ Y P + TY LI G C+ G E + L +M
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 469 KLPDISVWSSLVASV 483
+P+ + L+ S+
Sbjct: 509 CIPNAITYEILIHSL 523
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 7/341 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + NLLM+ Q + VF ++ +G +PD ++ IL+KGLC L
Sbjct: 89 IKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLC----LKGEV 144
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
H ++ +G D V Y TL+ LC G+ + A+Q+L ++ K ++ I
Sbjct: 145 HKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTI 204
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D + + A L E + + P + +YS++ G++ + + M +
Sbjct: 205 IDSMCKD-KLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ + + K+G V EA V+ M K + V YN L+ G C A
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVV-TYNSLMDGYCLVKQVNKA 322
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M+ Q G + +Y I+++G C+ EA ++ EEM + +P V TYN L+
Sbjct: 323 KSLFNVMA-QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD 381
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
GLC G+ A+ ++EM + + +I ++S++ ++C N
Sbjct: 382 GLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNN 422
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I ++ ++ ++M D+ F+ I + + G++ EA ++ +
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ N ++N+L+ ++ A LF V + S +++++ C+ +
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF-NVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+ +F+EM + +P+ +Y+ L+ GLC R + A L+ M R G +I+
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDR----GQPSNIIT 410
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++L A+C + A+ +L KI KG++ + C G ++ A+ + +
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR-LDDAQKVFEDL 469
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L++G P++ +Y+++ N+G EG +L +M+ G P+ + YE + +LF+
Sbjct: 470 LVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEN 529
Query: 348 DEALEVIEEEMVKG 361
D+A +++ E + +G
Sbjct: 530 DKAEKLLREMIARG 543
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 201/460 (43%), Gaps = 52/460 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++ +L E +++ ++ V +M + F T ++ RA Q+ AV + + +
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLC 162
S +F TL++ V+E +EAA + R C +V ++N+L++ C
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV-----TVNVLINGYC 170
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R + AL Q+ G PD+ +Y+ + GLC + + A ++ M Q+G
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV----QEGHD 226
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ Y ++ LC G++++ AK
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEE------------------------------------AKG 250
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++N+ + RG +P + +++ + L R+ E + ++ KG P + + + AL
Sbjct: 251 ILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 310
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G AL + EE M P YN L+ LC G A+ LK M + GC +
Sbjct: 311 KVGDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRS 368
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY ++DGLC+ R EA V ++M ++ T+N LI GLC K +A +
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+MIS+ P+ ++S++ C D+ LE +++
Sbjct: 429 QMISEGLQPNNITYNSILTHY-CKQGDIKKAADILETMTA 467
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 190/434 (43%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + L +++ + +V+D M + + + + + GQL EA + +
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ +FNTL+ + ++LE A + R V + + N+L++ LC+
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALCKVGD 314
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LAL +F+EM GC PD +Y+ L+ LC+ +L +A LL M G +
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM----ESTGCPRSTI 370
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ LC + +I++A ++ +++ +G+ R+ I DG
Sbjct: 371 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-----RNAITFNTLIDG------------ 413
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L + +I + +++++M ++G P+ + Y + L K G
Sbjct: 414 -------------------LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A +++E M F V Y L+ GLC AG + VA+ L+ M + G + Y
Sbjct: 455 IKKAADILET-MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK-GMRPTPKAY 512
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY-EAVMWLEEMI 465
++ L R +A + EM P TY ++ RGLC G EA ++ EM+
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 572
Query: 466 SQAKLPDISVWSSL 479
+ +P+ S + L
Sbjct: 573 DKGFIPEFSSFRML 586
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 7/332 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N++++ LC+ + + A + +M +GC PD +++ L+ LC RL EA L
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA--- 287
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+++ KG D+ + L+ ALC G A+++ E++ G + + + C+
Sbjct: 288 -RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+ + A L+ + G S +Y+ + L + RI E ++V D+M +G + +
Sbjct: 347 LGK-LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ + L KD +D+A E+I + M+ P YN +L C G+ A L+
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQ-MISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M+ G + TYG L++GLC+ GR A +VL M I+ P + YN +++ L
Sbjct: 465 MTAN-GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 523
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ EM + PD + + +C
Sbjct: 524 NIRDALSLFREMAEVGEPPDALTYKIVFRGLC 555
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 44/346 (12%)
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
L+ +G + + + N L++VL + + L V+ EM +G PD +++ LMK LC
Sbjct: 44 LQPLFGIQADTVV--YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 101
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
++ A +L M S +G D + TL+ ++G I+ A+++ ++L G A
Sbjct: 102 AHQVRTAVLMLEEM----SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 157
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
K + LI G Y + GR+ +
Sbjct: 158 TK----------------------VTVNVLING-------YCKL-------GRVEDALGY 181
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+ + GF P + Y + L ++ V AL+V++ MV+ P V YNI++ LC
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV-MVQEGHDPDVFTYNIVVNCLC 240
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A L +M + GC+ + T+ L+ LC R EA + ++ ++ P V
Sbjct: 241 KNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 299
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+N+LI LC +G + A+ EEM + PD +++L+ ++C
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 208/504 (41%), Gaps = 75/504 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +M+ + RI + + +I M F IR G++ +A+++F ++
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMPFPP---DTFTFNPLIRALCVRGRVPDALAVFDDM 188
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C +++ LL K S A +L L + I + N+L++ +C
Sbjct: 189 LHRGCSPSVVTYSILLDATCKASGYRQAMVL-LDEMRAKGCEPDIVTYNVLINAMCNEGD 247
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------------- 212
D AL++ ++ GC PD +Y ++K LC R E L M
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307
Query: 213 -----------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+S+ G DIV Y ++L LCD G++ DA+++L ++ G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
K P + + L E E A+ L+ E + P +++ + L +G +
Sbjct: 368 CK-PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
KV+++M G P +V Y + + L + +D+A+E++ G P + +N LLK
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC-KPDIVTFNTLLK 485
Query: 376 GLC------DAGNSAVAVMY-----------------------------LKKMSKQVGCV 400
GLC DA V +M+ LK M++ GC+
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAEN-GCI 544
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY I+VD L + G+ EA ++L M + P + TYN +I + GK EA+
Sbjct: 545 PNQSTYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDL 602
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
L M+S PD + SL +C
Sbjct: 603 LRVMVSNGLSPDTITYRSLAYGIC 626
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 194/441 (43%), Gaps = 20/441 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
P+ PV S+ G S R E++E+ +M + C + F T + + + G ++
Sbjct: 265 PDAVTYTPVLKSLCG----SERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLL 157
A+ + ++S+ C+ +++++L + +++ A L R YG K + +
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG--CKPDTIAYTTV 378
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ LC + + A + EM C PD +++ ++ LC ++ A ++ M S
Sbjct: 379 LKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM----S 434
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGE 275
+ G DIV Y +++ LC++ I DAM++L + G K + + LC + E
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
D A+ L+ + P +++ + L +G +++ + L M G P+ Y
Sbjct: 495 D---AEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYN 551
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K G EAL+++ M GT P + YN ++ + AG A+ L+ M
Sbjct: 552 IVVDALLKAGKTQEALKLLSG-MTNGT--PDLITYNTVISNITKAGKMEEALDLLRVMVS 608
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + TY L G+CR+ A R+L + P YN ++ G C +
Sbjct: 609 N-GLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTD 667
Query: 456 EAVMWLEEMISQAKLPDISVW 476
A+ M+S +PD S +
Sbjct: 668 IAIDCFAHMVSSGCMPDESTY 688
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 184/437 (42%), Gaps = 52/437 (11%)
Query: 31 FKEAKEKYPNYRHN--GP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+KE +E + N P + +++ L + + +V+D M C +++
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----S 141
+ G++++AV L L + C T ++ T+LK + + E A L
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
C EV + N ++ LCQ D A+ V ++M GC PD +Y+ ++ GLCN+R
Sbjct: 403 CPPDEV-----TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC 457
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+++A LL ++ G DIV + TLL LC + +DA Q++ ++ +
Sbjct: 458 IDDAMELLSNL----QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDAT 513
Query: 262 RRHRIDLCPCNDG---EDIEGAK--------------SLINEALIRGG------------ 292
+ + C G + IE K +++ +AL++ G
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM 573
Query: 293 ---IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P L +Y+ + ++ G++ E +L M + G P + Y + + ++ D
Sbjct: 574 TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ ++ G P YN +L G C + +A+ M GC+ + TY IL
Sbjct: 634 AIRMLCRLQDMG-LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS-GCMPDESTYIIL 691
Query: 410 VDGLCRDGRFLEASRVL 426
++ L + EA ++L
Sbjct: 692 LEALAYECLLDEAKQLL 708
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 50/331 (15%)
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL+K LC+ R+ +A + ++ G+ +V Y T++ C G+I+DA +++
Sbjct: 102 NILIKRLCSGGRVADAERVFATL-------GASATVVTYNTMVNGYCRAGRIEDARRLI- 153
Query: 250 KILRKGLKAPKSRRHRIDL--CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
G+ P L C G + A ++ ++ L RG PS+ +YS +
Sbjct: 154 ----SGMPFPPDTFTFNPLIRALCVRGR-VPDALAVFDDMLHRGCSPSVVTYSILLDATC 208
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE----------- 356
+ +LDEMR KG P +V Y + A+ +G VDEAL ++ +
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268
Query: 357 -----------------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
EM P +N ++ LC G A+ + M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
S+ GC+ + TY ++DGLC GR +A +L + P Y +++GLCSI +
Sbjct: 329 SEH-GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A + EM+ PD +++++AS+C
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLC 418
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 9/213 (4%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR---TKGFWPSL 331
E+I+ A +L++ GG + ++ + R+ G +V D R T G ++
Sbjct: 72 EEIDDALALVDSIASGGGSGKCLPLPVVPCNILIK-RLCSGGRVADAERVFATLGASATV 130
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + + G +++A +I F P +N L++ LC G A+
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLIS----GMPFPPDTFTFNPLIRALCVRGRVPDALAVFD 186
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M + GC + TY IL+D C+ + +A +L+EM + P + TYNVLI +C+
Sbjct: 187 DMLHR-GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G EA+ L ++ S PD ++ ++ S+C
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 41/227 (18%)
Query: 25 LTALKIFKEAKEKYPNYRH-----NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
L ++ +++A++ N H + + ++I L + + + E + M + C
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----- 134
S + + +AG+ EA+ L ++ N ++NT++ + K K+E A
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLR 604
Query: 135 ----------HILFLRSCYGW----------EVKSRIQSLNLLMDV---------LCQCR 165
I + YG + R+Q + L D CQ
Sbjct: 605 VMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNW 664
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
R+D+A+ F M GC PD +Y IL++ L + L+EA LL ++
Sbjct: 665 RTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 194/437 (44%), Gaps = 45/437 (10%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS 141
F + Y G++ A S+F + + T +FNTL+ + KL EA H
Sbjct: 97 FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ + S L++ LC+ + AL + ++++ + D Y+I++ LC D+
Sbjct: 157 ALGFHLDQ--VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+++A Y ++ + K D+V + +L+ C G++++A + +++ K +
Sbjct: 215 VSDA----YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY 270
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C DG +I AK+++ + +G IP + +YS++ + + V
Sbjct: 271 TFSILVDALCKDG-NITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFST 329
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P Y + L K MVDEAL + +E KG P YN L+ GLC G
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG-IAPDTVTYNSLIDGLCKLG 388
Query: 382 ------------------------NSAV-----------AVMYLKKMSKQVGCVANGETY 406
NS + A+ +KK+ Q G + TY
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ-GIQPSMYTY 447
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+DGLC+ GR A V +++LI+ Y TYN++I GLC G EA + L +M +
Sbjct: 448 NILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMEN 507
Query: 467 QAKLPDISVWSSLVASV 483
+PD + +++ ++
Sbjct: 508 NGIIPDAVTYETIIRAL 524
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 18/397 (4%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK------ESKLEAAHILFLRSCYGWEVKS 149
+N VS F + + FN +L +VK + + +H L L+ +
Sbjct: 38 VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKG-----ITP 92
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
I + N+L++ C A +F ++ G +P +++ L+ G+C + +L EA H
Sbjct: 93 TIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF- 151
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+ G D V YRTL+ LC G+ + A+Q+L+KI K + + I
Sbjct: 152 ---HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C D + + A L +E + + P + +++++ + G++ E + EM K P
Sbjct: 209 LCKD-KAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP 267
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + + AL KDG + A ++ M +G +P V Y+ L+ G C A
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGV-IPDVVTYSSLMDGYCLVNEVNKAKHV 326
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
MS+ +G + +Y I+++GL + EA + +EM + P TYN LI GLC
Sbjct: 327 FSTMSR-LGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLC 385
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G+ A ++EM + DI ++SL+ +C N
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKN 422
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 8/388 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ T I + G+ A+ + K + +N ++ + K+ + A+ L+
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLY-SEM 225
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + N L+ C + A +F EM + PD ++ IL+ LC D +
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNI 285
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
A ++L M ++G D+V Y +L+ C ++ A + + R G+ AP +
Sbjct: 286 TRAKNMLAVMM----KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV-APHAH 340
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I + + ++ A SL E +G P +Y+++ L GRI +++DEM
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G ++ Y + + L K+ +D+A+ ++++ +G P++ YNIL+ GLC G
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG-IQPSMYTYNILIDGLCKGGR 459
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + + + G N TY I+++GLC++G F EA +L +M P TY
Sbjct: 460 LKNAQDVFQDLLIK-GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYE 518
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+IR L + +A L EMI + L
Sbjct: 519 TIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 329 PSLVMYEAKLAALFK--DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS+V + L ++ K + A+ + + +KG PT+ +NIL+ C G A
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKG-ITPTIVTFNILVNCYCHLGEMTFA 113
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
K+ K +G T+ L++G+C +G+ EA + ++ + +Y LI
Sbjct: 114 FSIFAKILK-LGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN 172
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
GLC IG+ A+ L+++ + D+ +++ ++ S+C + A
Sbjct: 173 GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 8/378 (2%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQ + + T S+N LL+ + K + + + + G + L+ LCQ +R
Sbjct: 9 SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTY-NDMLGAGCVPNTYTYGYLLRSLCQAQR 67
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A VF+ M QGC P+ SY IL+ GLC ++++EA LL M G ++V
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI----DGGHQPNVV 123
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +LL LC GK+++A+ + +++ +G P + + + + D+ A L E
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +G IP++ +Y+++ +G + +M +G P++ + L K G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA + E G P V YN L++G+C G A L++M + G + +Y
Sbjct: 243 MVEAHRLFLEMRSLGC-PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS-GVGPDIVSY 300
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+DG + G A ++ E+ P +Y+ +I LC GK A + ++MI+
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 467 QAKLPDISVWSSLVASVC 484
PD +V LV +C
Sbjct: 361 NGSAPDAAVVIPLVIGLC 378
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 188/436 (43%), Gaps = 8/436 (1%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+Y H Y ++ +L++S R + + M G C + +R+ +A + EA
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEA 71
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+F+ ++ C S++ L+ + + K++ A L G + + + L+
Sbjct: 72 RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLS 130
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ +F M ++GC PD Y++L+ G + EA Y +F + +K
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA----YRLFEEMLEK 186
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + Y +LL +G+ + + +LR+G + + C G+ +E
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE- 245
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E G P + SY+ + + ++G+ E ++L EM G P +V Y +
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G +D A+++ E + K P Y+ ++ LC AG A + K M G
Sbjct: 306 GYSKSGALDHAIKLFYE-IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN-GS 363
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ LV GLCR R E+ + + M+ P + YN+L+ LC + +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Query: 460 WLEEMISQAKLPDISV 475
E+ + PD+ +
Sbjct: 424 IFHELTERGFSPDVEI 439
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 8/403 (1%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
A++G+ + + ++ CV T ++ LL+ + + + E A +F R
Sbjct: 28 AKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF-RGMAAQGCSPN 86
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S ++L+ LC+ ++ D A + EM G P+ +Y L+ GLC +L EA L
Sbjct: 87 VFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFS 146
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M +R G D V+Y L+ +G + +A ++ E++L KG P + L
Sbjct: 147 RMVYR----GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC-IPTVFTYNSLLSG 201
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ + +SL + L +G +P++ +++ + G +VE ++ EMR+ G P
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + G EA ++ E M++ P + YNIL+ G +G A+
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLRE-MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++ K G + +Y ++D LCR G+ A V ++M+ P L+ GLC
Sbjct: 321 YEIPKS-GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
+ E+ + M+ +P I ++ L+ +C +VC
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 7/338 (2%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
++ N Y S++ L + ++ E ++ +M C V+ I +++ G + EA
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
LF+ + + C+ ++N+LL ++ + LF + I + N L+D
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF-KDMLRQGCVPNIFTFNNLLD 235
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ A +F EM GC PD SY+ LM+G+C+ + +EA LL M +
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI----RS 291
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G G DIV Y L+ G + A+++ +I + GL+ I C C G+ +
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK-VGA 350
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A + + + G P A + I L R+ E ++ M P + Y +
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L K D+ E+ E +G F P V + ++L+ L
Sbjct: 411 KLCKAKRSDDVCEIFHELTERG-FSPDVEISKVILETL 447
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
W SQ + Y LL L G+ +L G P + + L
Sbjct: 6 WAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGC-VPNTYTYGYLLRSLCQ 64
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ E A+S+ +G P++ SYS + L ++ E ++L+EM G P++V
Sbjct: 65 AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT 124
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + L+ L K G + EA+++ + +G P VYN+L+ G G+ A ++M
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ GC+ TY L+ G R G F + ++ML + P + T+N L+ G C +G
Sbjct: 184 LEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA EM S PD+ +++L+ +C
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 178/372 (47%), Gaps = 8/372 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ S NT + + + L+ A F R + S + N L+ + + + L +
Sbjct: 10 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVD-FNRLLTSIAKTKHHSTLLSLS 68
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++MD G PD + I++ LC+ R++ A +S +I + G D + TL+
Sbjct: 69 RQMDSFGIPPDVYTLAIVINSLCHLNRVDFA----FSALAKILKLGHQPDATTFTTLIRG 124
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +GKI +A+ + +K++ +G + + C D + E A ++ +E + +G P
Sbjct: 125 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE-AFNIFSEMITKGISP 183
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+++ L +++EM P + + AL K+GMV EA +V+
Sbjct: 184 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 243
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ + +G P V YN L+ G C VAV M + CVAN +Y L++G C
Sbjct: 244 DMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK-DCVANVISYNTLINGYC 301
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ +A + EEM + P TYN LI GLC +G+ +A+ EM+++ ++PD+
Sbjct: 302 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 361
Query: 475 VWSSLVASVCCN 486
+ +L +C N
Sbjct: 362 TYRTLSDYLCKN 373
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 11/408 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L+EA+S F + T FN LL + K +K + + R + + + +L
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-TKHHSTLLSLSRQMDSFGIPPDVYTLA 84
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++++ LC R D A ++ G PD ++ L++GLC + ++ EA HL F +
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL----FDK 140
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC ++ +A I +++ KG+ + + C E
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ +L+NE + +P + + + + L EG + E V+D M +G P++V Y
Sbjct: 201 -WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 259
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A + VD A++V + MV V V YN L+ G C + A+ ++MS+
Sbjct: 260 ALMDGHCLRNEVDVAVKVFDT-MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 318
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
Q N TY L+ GLC GR +A + EM+ R P + TY L LC +
Sbjct: 319 Q-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK-NRHL 376
Query: 456 EAVMWLEEMISQAKL-PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ M L + I + PDI ++++++ + C +L R LSS
Sbjct: 377 DKAMALLKAIEGSNWDPDIQIYTTILDGM-CRAGELEDARDLFSNLSS 423
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 159/346 (45%), Gaps = 21/346 (6%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ + + + L + +MD G PD + +IL+ C+ RRL A +S+ ++
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA----FSVLAKL 642
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ G D+V Y TL+ LC K++ KG+ + + CN E
Sbjct: 643 LKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCE- 688
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ +L+NE + +P++ +S + L EG I V+D M +G P +V Y A
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ +DEA++V + + KG VP VR YNIL+ G C A+ L++MS Q
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGC-VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 807
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G +A+ TY L+ GLC GR A + EM+ P + TY +L+ LC E
Sbjct: 808 -GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 866
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
A++ L+ + DI V++ + + C +L R LSS
Sbjct: 867 AMVLLKAIEGSNLDADILVYNIAIDGM-CRAGELEAARDLFSNLSS 911
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 183/492 (37%), Gaps = 111/492 (22%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ L + + E +V+D M E + + + +++ AV +F +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+CV S+NTL+ K ++ A LF E+ + N L+ LC R
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLF-EEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG--EDIVI 227
A+ +F EM +G PD +Y L LC +R L++A LL ++ +GS DI I
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EGSNWDPDIQI 397
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T+L +C G+++DA + + KGL+
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQ------------------------------ 427
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P++ +Y+ M L +G + E K+ EM G P+ Y ++
Sbjct: 428 ------PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN--- 478
Query: 348 DEALEVIE--EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+EAL IE EEM+ F V +L+ L D G L + KQ+ C + +
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG--------LDQSVKQILCKPSSSS 530
Query: 406 ----------------------------YGILVDGLCRDGRFL---------EASRVLEE 428
+ L D L R L + +++L
Sbjct: 531 RPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTS 590
Query: 429 MLIRSYW----------------PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ ++ P V T N+LI C + + A L +++ PD
Sbjct: 591 IAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPD 650
Query: 473 ISVWSSLVASVC 484
+ + +L+ +C
Sbjct: 651 VVTYGTLMNGLC 662
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 170/414 (41%), Gaps = 32/414 (7%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I G+L +A+SLF + + ++ TL + K L+ A L L++
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL-LKA 385
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G IQ ++D +C+ + A +F + +G P+ +Y+I++ GLC
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L EA+ L F +++ G + Y + + +++LE++L +G S
Sbjct: 446 LAEASKL----FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501
Query: 262 RRHRIDLCPCNDGEDIEGAKSLI----NEALIRG----GIPSLASYSAMAIDLYNEGRIV 313
+ +DG D + K ++ + + G +P L S+
Sbjct: 502 TTTLLVGMLSDDGLD-QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFN 560
Query: 314 EGDKVL---DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
D L + M PS V + L ++ K L + +M P V
Sbjct: 561 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLS-LSTQMDSFGIPPDVYTL 619
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NIL+ C A L K+ K +G + TYG L++GLC+ M+
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLK-LGFQPDVVTYGTLMNGLCK-------------MI 665
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P + TYN LI LC++ + L EM++ +P++ V+S++V ++C
Sbjct: 666 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 719
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A+K+F K PN R Y +I + R+ + +++QM +
Sbjct: 762 AVKVFDTMVHKGCVPNVRS----YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 817
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T I G+L A++LF + + ++ LL + K L A +L L++ G
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL-LKAIEG 876
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + I N+ +D +C+ + A +F + +G PD +Y+I++ GLC L+E
Sbjct: 877 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936
Query: 205 ATHLLYSM----FWRISQKGSGEDIVIYRTLLFALCD 237
A L M W S + +IY+ ++ D
Sbjct: 937 ANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEID 973
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 15/401 (3%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCY 143
A T + L+EA+ LF N+ Q + F+ LL + K + LF + C
Sbjct: 40 AFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEIC- 98
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + + N++++ LC+C R +AL V +M G PD + L+ G C R+
Sbjct: 99 --GIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L+ M + D+VIY T++ C G + +A+ + ++ R G++A
Sbjct: 157 GAVDLVSKM----EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTY 212
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C G + A+ L+ + ++R +P++ +++A+ EG+ +E K +EM
Sbjct: 213 NSLVTGLCCSGRRSDAAR-LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+ P + Y + + L G VDEA ++++ + KG F P V YN L+ G C
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCF-PDVVTYNTLINGFCKTKRV 330
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+++MS Q G V + T+ ++ G + GR A + M R P + TY++
Sbjct: 331 DEGTKLVREMS-QRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSI 386
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GLC + +A++ E M DI+ ++ ++ +C
Sbjct: 387 LLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMC 427
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 161/407 (39%), Gaps = 46/407 (11%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
H+ Y +I L +R V+ +M E ++ I + + ++ AV L
Sbjct: 102 HDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDL 161
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + C +NT++ K + A +LF R
Sbjct: 162 VSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGR---------------------- 199
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
M+ G D +Y+ L+ GLC R ++A L+ M R
Sbjct: 200 --------------MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMR----DIV 241
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+++ + L+ A +GK +A + E+++R+ + + + C G+ ++ AK
Sbjct: 242 PNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ-VDEAKQ 300
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+++ + +G P + +Y+ + R+ EG K++ EM +G V + + F
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G D A E+ + P +R Y+ILL GLC A++ + M K +
Sbjct: 361 QAGRPDAAQEIFSRMGSR----PNIRTYSILLYGLCYNWRVEKALVLFESMQKS-EMELD 415
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
TY I++ G+C G +A + + + P V TY +I G C
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 10/251 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L ++ L A K ++E + + + Y SMI L ++ E K
Sbjct: 242 PNVITFTALINAFVREGKFLEAKKFYEEMIRRCID--PDVFTYNSMIHGLCMHGQVDEAK 299
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C + T I + + +++E L + +SQ V T +FNT+++
Sbjct: 300 QILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + +AA +F R + I++ ++L+ LC R + AL +F+ M D
Sbjct: 360 FQAGRPDAAQEIFSR----MGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELD 415
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I++ G+C + +A + +F +S KG D+V Y T++ C + A
Sbjct: 416 ITTYNIVIHGMCMIGNVEDA----WDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471
Query: 246 QILEKILRKGL 256
+ K+ GL
Sbjct: 472 FLYRKMQEDGL 482
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 11/367 (2%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+N ++ +L+AA R V+ + N L+ LC R+ AL V ++M
Sbjct: 137 YNAMVAGYCGAGQLDAAR----RLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+GC PD +Y IL++ C +A LL M KG DIV Y +L +C
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH----DKGCAPDIVTYNVVLNGICQ 248
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+G+++DAM+ L+ + G + P + + I L E E A+ L+ E +G P++
Sbjct: 249 EGRVEDAMEFLKNLPSYGCE-PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+++ + L G + +VL++M G P+ + Y L A K + +A+E +E
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ +G + P + YN LL LC G VA+ L ++ K GC +Y ++DGL + G
Sbjct: 368 VSRGCY-PDIVSYNTLLTALCRNGEVDVAIELLHQL-KDKGCSPVLISYNTVIDGLTKAG 425
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ EA +L+EM + P + TY+ + GLC + EAV ++ P ++++
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485
Query: 478 SLVASVC 484
+++ +C
Sbjct: 486 AILLGLC 492
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 194/401 (48%), Gaps = 20/401 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQ--SFNTLLKEMVKESKLEAAHILFLRSCYG 144
+R R G+L++A+ L +L+ N + L+K++ + A + S G
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAAS--G 131
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+V N ++ C + D A + +M + PD +Y+ L++GLC R +
Sbjct: 132 PDV----MVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSN 184
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A +L MF R G D+V Y LL A C + + AM++L+++ KG AP +
Sbjct: 185 ALAVLEDMFRR----GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGC-APDIVTY 239
Query: 265 RIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ L C +G +E A + G P+ SY+ + L+ R + +K+++EM
Sbjct: 240 NVVLNGICQEGR-VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KG P++V + ++ L + G+V+ A+EV+E+ M + P YN LL C
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ-MPQYGCTPNSLSYNPLLHAFCKQKKI 357
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A+ +++ M + GC + +Y L+ LCR+G A +L ++ + P + +YN
Sbjct: 358 HKAMEFVELMVSR-GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+I GL GK EA+ L+EM S+ PDI +S++ + +C
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 162/367 (44%), Gaps = 43/367 (11%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D+M C + + + G++ +A+ KNL + C T S+N +LK +
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ E A L + + + N+L+ LC+ + A+ V ++M GC P+
Sbjct: 282 FTAERWEDAEKLMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+ L+ C +++++A + M R G DIV Y TLL ALC G++ A+
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSR----GCYPDIVSYNTLLTALCRNGEVDVAI 396
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L ++ KG C+ P L SY+ +
Sbjct: 397 ELLHQLKDKG---------------CS---------------------PVLISYNTVIDG 420
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G+ E ++LDEM +KG P ++ Y + L ++ ++EA+ + G P
Sbjct: 421 LTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG-IRP 479
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
T +YN +L GLC + A+ M GC+ N TY ILV+GL +G EA +
Sbjct: 480 TAALYNAILLGLCKRRETHNAIDLFAYMISS-GCMPNESTYTILVEGLAYEGLVKEAREL 538
Query: 426 LEEMLIR 432
++ R
Sbjct: 539 FAQLCSR 545
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 14/428 (3%)
Query: 44 NGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+GP VY +M+ + ++ + ++ M E + T IR G+ + A+
Sbjct: 130 SGPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNAL 186
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
++ +++ + C+ ++ LL+ K S + A L L + I + N++++
Sbjct: 187 AVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL-LDEMHDKGCAPDIVTYNVVLNG 245
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+CQ R + A+ + + GC P+ SY+I++KGL R +A L+ M + KG
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM----AHKG 301
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V + L+ LC +G ++ AM++LE++ + G P S + L + I A
Sbjct: 302 CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGC-TPNSLSYNPLLHAFCKQKKIHKA 360
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ + RG P + SY+ + L G + ++L +++ KG P L+ Y +
Sbjct: 361 MEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDG 420
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G EALE+++E KG P + Y+ + GLC AV K+ + +G
Sbjct: 421 LTKAGKTKEALELLDEMTSKG-LQPDIITYSTIASGLCREDRIEEAVRTFCKV-QDMGIR 478
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
Y ++ GLC+ A + M+ P TY +L+ GL G EA
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538
Query: 461 LEEMISQA 468
++ S+
Sbjct: 539 FAQLCSRG 546
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 46/317 (14%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD Y+ ++ G C +L+ A L+ M D Y TL+ LC +G+ +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE-------PDAYTYNTLIRGLCGRGRTSN 184
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ +LE + R RG +P + +Y+ +
Sbjct: 185 ALAVLEDMFR------------------------------------RGCLPDVVTYTILL 208
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ K+LDEM KG P +V Y L + ++G V++A+E ++ G
Sbjct: 209 EATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGC- 267
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P YNI+LKGL A A +++M+ + GC N T+ +L+ LCR G A
Sbjct: 268 EPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK-GCPPNVVTFNMLISFLCRRGLVEPAM 326
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VLE+M P +YN L+ C K ++A+ ++E M+S+ PDI +++L+ ++
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386
Query: 484 CCNTADLNVCRKTLEQL 500
C N +++V + L QL
Sbjct: 387 CRN-GEVDVAIELLHQL 402
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 194/429 (45%), Gaps = 52/429 (12%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L +A+ LF ++ + + FN L+ +V+ + + L+ + +++ I S
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY-QKMERKQIRCDIYSFT 120
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+ C C + AL F ++ G +PD ++ L+ GLC D R++EA L F +
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL----FHQ 176
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK-SRRHRID-LCP--- 270
I + D++ + TL+ LC +G++ +A+ +L++++ GL+ + + +D +C
Sbjct: 177 ICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 271 -------------------------------CNDGEDIEGAKSLINEALIRGGIPSLASY 299
C DG + + +L E +G P++ +Y
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDKGIFPNIVTY 291
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M GR ++L EM + P++V Y A + A K+G EA E+ +E +
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 360 KGTFVPTVRVYNILLKGLC--DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G +P YN ++ G C D ++A + YL GC + T+ L+DG C
Sbjct: 352 RG-IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK---GCSPDVFTFTTLIDGYCGAK 407
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R + +L EM R TYN LI G C +G A+ ++MIS PDI +
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467
Query: 478 SLVASVCCN 486
+L+ +C N
Sbjct: 468 TLLDGLCDN 476
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 203/449 (45%), Gaps = 22/449 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E ++ Q+ C F T + R G++ EAV+L +
Sbjct: 153 TFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRM 208
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T + M K +A L + +K + + ++D LC+ R
Sbjct: 209 VENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGR 268
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+ ++F EM +G +P+ +Y+ ++ G C R + A LL M R IS ++
Sbjct: 269 HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISP-----NV 323
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ A +GK +A ++ +++L +G+ P + + + + ++ A+ +
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGI-IPNTITYNSMIDGFCKQDRLDAAEDMFY 382
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+G P + +++ + RI +G ++L EM +G + V Y + G
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV-------- 397
++ AL+ + ++M+ P + N LL GLCD G A+ K M K
Sbjct: 443 DLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 398 --GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC +
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA M S++ P++ +++L+ C
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 189/439 (43%), Gaps = 40/439 (9%)
Query: 29 KIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+F E ++K +PN Y MIG S R + + ++ +M +
Sbjct: 274 NLFIEMQDKGIFPNI----VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGW 145
I + + G+ EA L+ + + T ++N+++ K+ +L+AA +F L + G
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG- 388
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + L+D C +R D + + EM +G + +Y+ L+ G C LN A
Sbjct: 389 -CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M G DIV TLL LCD GK++DA+++ + + + + S
Sbjct: 448 LDLSQQMI----SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH--- 500
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P N E P + +Y+ + L NEG+ +E +++ +EM +
Sbjct: 501 ----PFNGVE------------------PDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + + L K +DEA ++ M +F P V +N L+ G C AG
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVS-MGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ +M ++ G VA+ Y L+ G + G A + +EM+ +P T ++
Sbjct: 598 GLELFCEMGRR-GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Query: 446 RGLCSIGKQYEAVMWLEEM 464
G S + AV LE++
Sbjct: 657 TGFWSKEELERAVAMLEDL 675
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 21/403 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+++ I + G+ +++ +LF + ++N ++ + AA L L+
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL-LQE 313
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ + + N L++ + + A ++ EM +G P+ +Y+ ++ G C R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A MF+ ++ KG D+ + TL+ C +I D M++L ++ R+GL A
Sbjct: 374 LDAAE----DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G D+ A L + + G P + + + + L + G++ + ++
Sbjct: 430 TYNTLIHGFCLVG-DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 322 MRT-----------KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
M+ G P ++ Y + L +G EA E+ EE +G VP Y
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG-IVPDTITY 547
Query: 371 NILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ ++ GLC A M++ SK N T+ L++G C+ GR + + EM
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R Y LI G +G A+ +EMIS PD
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 190/406 (46%), Gaps = 18/406 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
T I+ GQ+++A+ + S+ TL+ + K + AA + LR
Sbjct: 145 LTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA-LQLLRRV 203
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V+ + N ++D +C+ + + A ++ EM +G PD +Y+ L+ G C ++
Sbjct: 204 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKM 263
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP--- 259
+AT L M + + ++ + L+ C + ++++A +L ++++G+K
Sbjct: 264 KDATDLFNKMIF----ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319
Query: 260 -KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
S R L +++ AK + N RG P++ SYS M ++ E +
Sbjct: 320 YNSLMDRYCLV-----KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGL 377
EM P +V Y + + L K G + AL++++E +G VP ++ YN +L L
Sbjct: 375 FKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG--VPHDKITYNSILDAL 432
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A+ L KM K G + TY LVDGLC++GR +A V E++L++ Y
Sbjct: 433 CKNHQVDKAIALLTKM-KDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V Y +I+G CS G E++ L +M +P+ + ++ S+
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL 537
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 206/438 (47%), Gaps = 10/438 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++G L +SN + + + QM+ + + + I +++ GQ + S+ +
Sbjct: 75 FGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKIL 134
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + TL+K + + ++ A + F S L++ LC+ ++
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQA-LQFHDKVVALGFHLNKVSYGTLINGLCKVGQT 193
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL + + +D + P+ Y+ ++ +C + +NEA + ++ + KG D+V
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA----FDLYSEMVSKGISPDVVT 249
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C GK++DA + K++ + + P I + ++ AK+++
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENIN-PNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDK-VLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G P + +Y+++ +D Y + V K + + + +G P++ Y + K
Sbjct: 309 MKQGIKPDVFTYNSL-MDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA+ + +E M +P V YN L+ GLC G + A+ + +M + G + TY
Sbjct: 368 VDEAMNLFKE-MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR-GVPHDKITY 425
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++D LC++ + +A +L +M P + TY L+ GLC G+ +A + E+++
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485
Query: 467 QAKLPDISVWSSLVASVC 484
+ + D++++++++ C
Sbjct: 486 KGYILDVNIYTAMIQGFC 503
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 175/390 (44%), Gaps = 16/390 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFK----NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ T I + GQ + A+ L + L Q N V + NT++ M K + A L+
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY----NTIIDSMCKVKLVNEAFDLY 235
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ + + N L+ C + A +F +M F+ P+ +++IL+ G C
Sbjct: 236 -SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+RRL EA ++L M ++G D+ Y +L+ C ++ A I I ++G+
Sbjct: 295 ERRLKEAKNVLAMMM----KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN- 349
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + I + + ++ A +L E IP + +Y+++ L G+I K+
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+DEM +G + Y + L AL K+ VD+A+ ++ + +G P + Y L+ GLC
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG-IQPDICTYTTLVDGLC 468
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A + + + + G + + Y ++ G C G F E+ +L +M P
Sbjct: 469 KNGRLEDARIVFEDLLVK-GYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
TY ++I L + +A L EMI++
Sbjct: 528 VTYEIIICSLFDKDENDKAEKLLREMITRG 557
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 43/356 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + + + E ++ +M + I + G++ +A LF
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ N +FN L+ KE +L EA ++L + G +K + + N LMD C
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG--IKPDVFTYNSLMDRYC 328
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A H+F + +G P+ SY I++ G C ++++EA +L F +
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL----FKEMHCNNII 384
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK----------SRRHRID----- 267
D+V Y +L+ LC GKI A+++++++ +G+ K + H++D
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444
Query: 268 ------------LCP--------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+C C +G +E A+ + + L++G I + Y+AM
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGR-LEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ G E +L +M G P+ V YE + +LF D+A +++ E + +G F
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 156/340 (45%), Gaps = 7/340 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S + L++L++ Q ++ L+ V ++ G P+ + L+KGLC ++++A
Sbjct: 103 ITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++ G + V Y TL+ LC G+ A+Q+L ++ K L P +
Sbjct: 163 QF----HDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGK-LVQPNVVMYNT 217
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + + A L +E + +G P + +Y+A+ G++ + + ++M +
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ + + K+ + EA V+ M +G P V YN L+ C A
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG-IKPDVFTYNSLMDRYCLVKEVNKA 336
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+S Q G N +Y I++ G C+ + EA + +EM + P V TYN LI
Sbjct: 337 KHIFNTIS-QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GLC +GK A+ ++EM + D ++S++ ++C N
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 197/443 (44%), Gaps = 52/443 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + E + ++ +MK D + T + YAR G + +A + + +
Sbjct: 241 TYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAM 300
Query: 107 SQ--FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ F WT +N L + + K++ A L + + + N L D +C
Sbjct: 301 TANGFEPDLWT--YNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKC 358
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R S AL + +EM +G +++I++KGLC D L A L M + G D
Sbjct: 359 RCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKM----ADDGLAPD 414
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
++ Y TL+ A C G I A ++++++R+GLK
Sbjct: 415 VITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK--------------------------- 447
Query: 285 NEALIRGGIPSLASYSAMAIDLYN---EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L +++ + LYN E R E +L +GF P V Y +AA
Sbjct: 448 -----------LDTFTLNTV-LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY 495
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
FK+ + AL + +EM++ P++ YN L+KGL G A+ L ++ ++ G V
Sbjct: 496 FKEYNSEPALR-LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK-GLVP 553
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY I++ C++G A + +M+ S+ P V T N L+ GLC GK +A+
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E + + K D+ +++L+ ++C
Sbjct: 614 ESWVEKGKKVDVITYNTLIQTMC 636
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 176/411 (42%), Gaps = 19/411 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F + T+ G L +A+S + F ++NTLL ++ L A L R
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+R + N L+ + A V + M G PD +Y++L GLC +
Sbjct: 266 KKDGVAPTR-PTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
Query: 202 LNEATHLLYSMFWRISQKGSG-EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++EA L M + G+ D+V Y TL A DA+++LE++ KG+KA
Sbjct: 325 VDEAFRLKDEM----ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C DGE +EGA +N+ G P + +Y+ + G I + ++D
Sbjct: 381 VTHNIVIKGLCKDGE-LEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMD 439
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM +G L L K+ +EA +++ +G F+P Y ++
Sbjct: 440 EMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRG-FMPDEVSYGTVMAAYFKE 498
Query: 381 GNSAVAV-----MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
NS A+ M KK++ + TY L+ GL R GR EA L E++ +
Sbjct: 499 YNSEPALRLWDEMIEKKLTPSIS------TYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P TYN++I C G A + +M+ + PD+ ++L+ +C N
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 160/394 (40%), Gaps = 34/394 (8%)
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+++M D + T I + +AG + +A +L + + T + NT+L + K
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
E + E A L + + S +M + S+ AL ++ EM + P
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEV-SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS 521
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ L+KGL RL EA L + +KG D Y ++ A C +G +++A Q
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELM----EKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCN--------DGEDIEGAKSLINEALIRGGIPSLASY 299
K++ K D+ CN +G+ ++ A L + +G + +Y
Sbjct: 578 HNKMVENSFKP--------DVVTCNTLMNGLCLNGK-LDKALKLFESWVEKGKKVDVITY 628
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + + +G + +M +G P Y L+AL + G +EA ++ +
Sbjct: 629 NTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-----GETYGILVDGLC 414
GT + +L D S K + V N E Y LV+GLC
Sbjct: 689 SGTLSQSFSS-PLLKPSSVDEAESG------KDAKTEEETVENPQDSASEAYTKLVNGLC 741
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
G+F EA +L+EM+ + TY L+ GL
Sbjct: 742 TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 38/249 (15%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I LS R+ E + ++++ D+ + I Y + G L A +
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR---IQSLNLLMDVLCQ 163
+ + + NTL+ + KL+ A LF W K + + + N L+ +C+
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKLF----ESWVEKGKKVDVITYNTLIQTMCK 637
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF---------- 213
D ALH F +M+ +G PD +Y++++ L R EA ++L+ +
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS 697
Query: 214 ------WRISQKGSGEDIVI---------------YRTLLFALCDQGKIQDAMQILEKIL 252
+ + SG+D Y L+ LC G+ ++A IL++++
Sbjct: 698 SPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMM 757
Query: 253 RKGLKAPKS 261
+KG+ S
Sbjct: 758 QKGMSVDSS 766
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 194/429 (45%), Gaps = 52/429 (12%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L +A+ LF ++ + + FN L+ +V+ + + L+ + +++ I S
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY-QKMERKQIRCDIYSFT 120
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+ C C + AL F ++ G +PD ++ L+ GLC D R++EA L F +
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL----FHQ 176
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK-SRRHRID-LCP--- 270
I + D++ + TL+ LC +G++ +A+ +L++++ GL+ + + +D +C
Sbjct: 177 ICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 271 -------------------------------CNDGEDIEGAKSLINEALIRGGIPSLASY 299
C DG + + +L E +G P++ +Y
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDKGIFPNIVTY 291
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M GR ++L EM + P++V Y A + A K+G EA E+ +E +
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351
Query: 360 KGTFVPTVRVYNILLKGLC--DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G +P YN ++ G C D ++A + YL GC + T+ L+DG C
Sbjct: 352 RG-IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK---GCSPDVFTFTTLIDGYCGAK 407
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R + +L EM R TYN LI G C +G A+ ++MIS PDI +
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467
Query: 478 SLVASVCCN 486
+L+ +C N
Sbjct: 468 TLLDGLCDN 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 203/449 (45%), Gaps = 22/449 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L +R++E ++ Q+ C F T + R G++ EAV+L +
Sbjct: 153 TFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRM 208
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T + M K +A L + +K + + ++D LC+ R
Sbjct: 209 VENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGR 268
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+ ++F EM +G +P+ +Y+ ++ G C R + A LL M R IS ++
Sbjct: 269 HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISP-----NV 323
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ A +GK +A ++ +++L +G+ P + + + + ++ A+ +
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGI-IPNTITYNSMIDGFCKQDRLDAAEDMFY 382
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+G P + +++ + RI +G ++L EM +G + V Y + G
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV-------- 397
++ AL+ + ++M+ P + N LL GLCD G A+ K M K
Sbjct: 443 DLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 398 --GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G + TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC +
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA M S++ P++ +++L+ C
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 192/439 (43%), Gaps = 40/439 (9%)
Query: 29 KIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+F E ++K +PN Y MIG S R + + ++ +M +
Sbjct: 274 NLFIEMQDKGIFPNI----VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGW 145
I + + G+ EA L+ + + T ++N+++ K+ +L+AA +F L + G
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG- 388
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + L+D C +R D + + EM +G + +Y+ L+ G C LN A
Sbjct: 389 -CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M G DIV TLL LCD GK++DA+++ + + ++ +
Sbjct: 448 LDLSQQMI----SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM----------QKSK 493
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+DL + +E P + +Y+ + L NEG+ +E +++ +EM +
Sbjct: 494 MDLDASHPFNGVE---------------PDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + + L K +DEA ++ M +F P V +N L+ G C AG
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVS-MGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ +M ++ G VA+ Y L+ G + G A + +EM+ +P T ++
Sbjct: 598 GLELFCEMGRR-GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Query: 446 RGLCSIGKQYEAVMWLEEM 464
G S + AV LE++
Sbjct: 657 TGFWSKEELERAVAMLEDL 675
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 21/403 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+++ I + G+ +++ +LF + ++N ++ + AA L L+
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL-LQE 313
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ + + N L++ + + A ++ EM +G P+ +Y+ ++ G C R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A MF+ ++ KG D+ + TL+ C +I D M++L ++ R+GL A
Sbjct: 374 LDAAE----DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G D+ A L + + G P + + + + L + G++ + ++
Sbjct: 430 TYNTLIHGFCLVG-DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 322 MRT-----------KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
M+ G P ++ Y + L +G EA E+ EE +G VP Y
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG-IVPDTITY 547
Query: 371 NILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ ++ GLC A M++ SK N T+ L++G C+ GR + + EM
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEM 605
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R Y LI G +G A+ +EMIS PD
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 207/459 (45%), Gaps = 20/459 (4%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
+F AK K N++ + P Y S++ + ++ + ++ I EC S+ I
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSIL---IHG 246
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
+L +A+S + ++ + S NT++ + K ++ A RS + VK+
Sbjct: 247 LCEQSKLEDAISFLHDSNKVVGPSIV-SINTIMSKFCKVGLIDVA-----RSXFCLMVKN 300
Query: 150 RIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N+L+ LC D AL +M+ G PD +Y+ L KG ++ A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ M +G D+V Y TL+ C G I++A+++ ++ L +G K +
Sbjct: 361 RKVVQKMLL----QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C C G IE A +L +E P YS + L EG + ++ ++MR K
Sbjct: 417 LLSCLCKVGR-IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
+P A L LFK+G + EA + + + V +YNI++ G A
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDT-WTRMDLMEDVVLYNIMIDGYVRLDGIAE 534
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ KM ++ G + T+ L++G CR G +EA ++LE + ++ P V TY L+
Sbjct: 535 AMQLYYKMIER-GITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C +G E +L EM + A +P ++ L+ +C
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLC 632
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 154/361 (42%), Gaps = 34/361 (9%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-- 212
N+L+ LC+ R + AL +F EM+ PD Y IL+ GLC + + A L M
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474
Query: 213 -----------------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
F ++ ED+V+Y ++ I +
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
AMQ+ K++ +G+ + + C G+ +E A+ ++ ++G +PS+ +Y+ +
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME-ARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G + E L EM P+ V Y + L + + E+L+++E KG
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG-L 652
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P YN +++ C G + L M C TY +L++ LC G +
Sbjct: 653 LPDSVTYNTIIQCFCK-GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVD 711
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R++ + R+ TY +I+ C+ G+ +A+ + +M+++ + I +S+++ +
Sbjct: 712 RMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRL 771
Query: 484 C 484
C
Sbjct: 772 C 772
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 186/404 (46%), Gaps = 18/404 (4%)
Query: 85 TAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+ +A+ K L+Q +N S+ TL+ + K AA I L+
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV-SYGTLINGVCKIGDTRAA-IKLLQKID 191
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G K + + ++D LC+ + A +F EM +G D +Y L+ G C + +L
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M K ++ Y L+ ALC +GK+++A +L +L+ +K
Sbjct: 252 EAIGLLNEMVL----KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD---- 303
Query: 264 HRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I DG +++ A+ + N + G P + +Y+ + + E +
Sbjct: 304 -VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM K P +V Y + + L K G + ++I+E +G V Y+ L+ GLC
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ-PANVITYSSLIDGLCK 421
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G+ A+ KM Q G N T+ IL+DGLC+ GR +A V +++L + Y V
Sbjct: 422 NGHLDRAIALFNKMKDQ-GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYNV+I G C G EA+ L +M +PD + ++ ++
Sbjct: 481 TYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 189/398 (47%), Gaps = 8/398 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + GQ+ S+ + + T + NTL+K + + +++ A + F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA-LHFHDKLLAQG 159
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S L++ +C+ + A+ + Q++D + P+ Y ++ LC + ++EA
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA- 218
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F ++ KG D+V Y TL++ C +GK+++A+ +L +++ K + + +
Sbjct: 219 ---YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ ++ AKS++ L P + +YS + + + + V + M G
Sbjct: 276 VDALCKEGK-VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + K+ MVDEAL + +E M + VP + Y+ L+ GLC +G
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKE-MHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +M + G AN TY L+DGLC++G A + +M + P T+ +L+
Sbjct: 394 WDLIDEMHDR-GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +A ++++++ ++ ++ ++ C
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC 490
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 183/394 (46%), Gaps = 28/394 (7%)
Query: 106 LSQFN---CVNWTQ---SFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+SQFN C+ T FN +L K + + +H L L+ ++ + +LN
Sbjct: 44 VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG-----IQPDLITLN 98
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL---LYSM 212
+L++ C + V ++ +G PD + + L+KGLC ++ +A H L +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++++Q V Y TL+ +C G + A+++L+KI + L P + +
Sbjct: 159 GFQLNQ-------VSYGTLINGVCKIGDTRAAIKLLQKIDGR-LTKPNVVMYSTIIDALC 210
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ + A L +E ++G + +YS + EG++ E +L+EM K P++
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + AL K+G V EA V+ M+K P V Y+ L+ G A
Sbjct: 271 TYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
MS +G + TY IL++G C++ EA + +EM ++ P + TY+ LI GLC G
Sbjct: 330 MS-LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ ++EM + + ++ +SSL+ +C N
Sbjct: 389 RIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKN 422
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 49/372 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y+++I L + ++E + +M ++T I + G+L EA+ L +
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++N L+ + KE K+ EA +L L++C VK + + + LMD
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC----VKPDVITYSTLMDGYFL 316
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A HVF M G PD +Y IL+ G C ++ ++EA +L F + QK
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL----FKEMHQKNMVP 372
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
IV Y +L+ LC G+I L
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVW------------------------------------DL 396
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I+E RG ++ +YS++ L G + + ++M+ +G P+ + L L K
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G + +A EV ++ + KG + V YN+++ G C G A+ L KM GC+ +
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHL-NVYTYNVMIDGHCKQGLLEEALTMLSKMEDN-GCIPDA 514
Query: 404 ETYGILVDGLCR 415
T+ I++ L +
Sbjct: 515 VTFEIIIIALFK 526
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 2/221 (0%)
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
P N + A SL + ++G P L + + + + G+I +L ++ +G+ P
Sbjct: 935 PHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHP 994
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + + L G V++AL ++ + +G + V Y L+ G+C G++ A+
Sbjct: 995 DTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVS-YGTLINGVCKIGDTRAAIKL 1053
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L+K+ ++ + Y ++D LC+ +A + EM ++ V TYN LI G C
Sbjct: 1054 LRKIDGRL-TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+GK EA+ L +M+ + P++ ++ LV ++C DL
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDL 1153
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 50/292 (17%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + +LN+L++ C + + ++ +G +PD ++ L+ GLC ++N+A
Sbjct: 957 IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016
Query: 207 HL---LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
H L + ++++Q V Y TL+ +C G + A+++L KI
Sbjct: 1017 HFHDKLLAQGFQLNQ-------VSYGTLINGVCKIGDTRAAIKLLRKI------------ 1057
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
DG R P + Y+ + L + + + EM
Sbjct: 1058 ---------DG---------------RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMN 1093
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KG +V Y + G + EA+ ++ +MV T P VR YNIL+ LC G
Sbjct: 1094 VKGISADVVTYNTLIYGFCIVGKLKEAIGLL-NKMVLKTINPNVRTYNILVDALCKEGKD 1152
Query: 384 AV--AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ ++ L KM GC AN T+ I++ L + ++L EM+ R
Sbjct: 1153 LLDESLSMLSKMEDN-GCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ R+ KG D+ L+ C G+I IL KIL++G +
Sbjct: 947 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGL 1006
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G+ + A ++ L +G + SY + + G K+L ++ + P
Sbjct: 1007 CLKGQ-VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPD 1065
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+VMY + AL K +V +A + E VKG V YN L+ G C G A+ L
Sbjct: 1066 VVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVV-TYNTLIYGFCIVGKLKEAIGLL 1124
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFL--EASRVLEEMLIRSYWPCVETYNVLIRGL 448
KM + N TY ILVD LC++G+ L E+ +L +M T+ ++I L
Sbjct: 1125 NKMVLKT-INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Query: 449 CSIGKQYEAVMWLEEMISQAKL 470
+ + L EMI++ L
Sbjct: 1184 FEKDENDKVEKLLHEMIARGLL 1205
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 123/276 (44%), Gaps = 41/276 (14%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + GQ+ S+ + + T +F TL+ + + ++ A + F
Sbjct: 968 INCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA-LHFHDKLLAQG 1026
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S L++ +C+ + A+ + +++D + PD Y+ ++ LC + +++A
Sbjct: 1027 FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKA- 1085
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F+ ++ KG D+V Y TL++ C GK+++A+ +L K++ K + P R + I
Sbjct: 1086 ---YGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN-PNVRTYNI 1141
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C +G+D L++E+L +L +M
Sbjct: 1142 LVDALCKEGKD------LLDESL----------------------------SMLSKMEDN 1167
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
G + V +E ++ALF+ D+ +++ E + +G
Sbjct: 1168 GCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L K K AL +FKE +K N Y+S+I L +S RI +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKSGRIPYVW 394
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ID+M +++ I + G L+ A++LF + T +F LL +
Sbjct: 395 DLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454
Query: 126 VKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K +L+ A +F L Y V + N+++D C+ + AL + +M+ GC
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNV----YTYNVMIDGHCKQGLLEEALTMLSKMEDNGC 510
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
PD ++ I++ L + N W I + GE
Sbjct: 511 IPDAVTFEIIIIALFK-KDENGGNVGFDKKVWEIVEHKKGE 550
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 200/456 (43%), Gaps = 39/456 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+IG L + N +V+ ++K + + F+ I Y+ AG +AV F + F+
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C +FN +L +V++ A ++ + + + +L+ LC+ ++ A
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVY-NQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L +F EM +G P++ Y I++ GLC +++ +A L F ++ G D++ Y
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL----FSKMRASGCNRDLITYNV 273
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL----CPCND---GEDIEGAKSL 283
LL C G + DA +L+ + + G H + + C N E A
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDG--------HILGVIGYGCLINGLFRARRYEEAHMW 325
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ L P + Y+ M L EGR+ E +L EM +G P + Y A +
Sbjct: 326 YQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCD 385
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +DEA E + E+ K P Y+IL+ G+C G A K+M K +GC+ +
Sbjct: 386 MGYLDEA-ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK-LGCLPSV 443
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEM-LIRSYWPC--------------VETYNVLIRGL 448
T+ L++GLC+ R EA + +M ++R P + + V++ L
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRK--PSLFLRLSQGTDKVFDIASLQVMMERL 501
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G +A L +++ LPDI ++ L+ C
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 31/408 (7%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E ++ N +Y+ ++ L ++ +I + + + +M+ C +
Sbjct: 217 ALVLFDEMTDR--GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + ++G L++A +L + L++ + + L+ + + + E AH+ + +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY-QKMLREN 333
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + +++ L Q R AL + EM +G PD Y+ L+KG C+ L+EA
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHR 265
S+ IS+ + Y L+ +C G I A I +++ + G L + +
Sbjct: 394 ----SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449
Query: 266 ID-LCPCNDGEDIEGAKSLINEA-LIRGGIPSL--------------ASYSAMAIDLYNE 309
I+ LC N +E A+ L + ++R PSL AS M L
Sbjct: 450 INGLCKANR---LEEARLLFYQMEIVRK--PSLFLRLSQGTDKVFDIASLQVMMERLCES 504
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G I++ K+L ++ G P + Y + K G ++ A ++ +E +KG +P
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH-MPDSVT 563
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
Y L+ GL AG + A+ ++M K+ GCV TY ++ CR+
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKK-GCVPESSTYKTIMTWSCREN 610
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 184/454 (40%), Gaps = 57/454 (12%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
P H+ Y S ++ S ++ + E +D M E V ++ IR+Y L E
Sbjct: 19 PTLFHS---YHSRTNPIATSIEVSTIIETLDPM-----EDGLKVISSRIRSYTITSVLQE 70
Query: 99 A--VSLFKNLSQFNCVNWTQSFNT----LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
L L ++ +W T ++ +++KE+ E + L+ +K +
Sbjct: 71 QPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFEL-YWKVLQELKNSAIKISSE 129
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L++ + + A+ F M C PD ++++++ L EA L ++
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVR----KEAFLLALAV 185
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ ++ + D+V Y L+ LC K QDA+
Sbjct: 186 YNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL--------------------------- 218
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
L +E RG +P+ YS + L +I + ++ +MR G L+
Sbjct: 219 ---------VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L K G +D+A +++ + K + V Y L+ GL A A M+ +K
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQL-LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + Y I++ GL ++GR EA +L EM R P YN LI+G C +G
Sbjct: 329 MLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EA E+ P+ +S L+ +C N
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 19/272 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++ T + + + ++ AL + E E+ R + Y ++I + + E +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTER--GLRPDTICYNALIKGFCDMGYLDEAE 393
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ C + ++ I + G +N+A +FK + + C+ +FN+L+ +
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453
Query: 126 VKESKLEAAHILF------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
K ++LE A +LF LR G + I SL ++M+ LC+ A +
Sbjct: 454 CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
++ G PD +Y+IL+ G C +N A + +F + KG D V Y TL+
Sbjct: 514 LMQLVDSGVLPDIRTYNILINGFCKFGNINGA----FKLFKEMQLKGHMPDSVTYGTLID 569
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L G+ +DA++I E++++KG P+S ++
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGC-VPESSTYK 600
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDS--------CECKDSVFATA-----IRTYARA 93
+ S+I L ++NR+ E + + QM+ + D VF A + +
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCES 504
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G + +A L L + +++N L+ K + A LF + + +
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSV-T 563
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
L+D L + R++ AL +F++M +GC P+ +Y +M C + ++ A
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 207/459 (45%), Gaps = 20/459 (4%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
+F AK K N++ + P Y S++ + ++ + ++ I EC S+ I
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSIL---IHG 246
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
+L +A+S + ++ + S NT++ + K ++ A RS + VK+
Sbjct: 247 LCEQSKLEDAISFLHDSNKVVGPSIV-SINTIMSKFCKVGLIDVA-----RSFFCLMVKN 300
Query: 150 RIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N+L+ LC D AL +M+ G PD +Y+ L KG ++ A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ M +G D+V Y TL+ C G I++A+++ ++ L +G K +
Sbjct: 361 RKVVQKMLL----QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C C G IE A +L +E P YS + L EG + ++ ++MR K
Sbjct: 417 LLSCLCKVGR-IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
+P A L LFK+G + EA + + + V +YNI++ G A
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDT-WTRMDLMEDVVLYNIMIDGYVRLDGIAE 534
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ KM ++ G + T+ L++G CR G +EA ++LE + ++ P V TY L+
Sbjct: 535 AMQLYYKMIER-GITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C +G E +L EM + A +P ++ L+ +C
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLC 632
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 146/384 (38%), Gaps = 69/384 (17%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-- 212
N+L+ LC+ R + AL +F EM+ PD Y IL+ GLC + + A L M
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474
Query: 213 -----------------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
F ++ ED+V+Y ++ I +
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
AMQ+ K++ +G+ + + C G+ +E A+ ++ ++G +PS+ +Y+ +
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME-ARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G + E L EM P+ V Y + L + + E+L+++E KG
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG-L 652
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P YN +++ C G + L M C TY +L++ LC G +
Sbjct: 653 LPDSVTYNTIIQCFCK-GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVD 711
Query: 424 RVL-----------------------------------EEMLIRSYWPCVETYNVLIRGL 448
R++ +ML + + + Y+ +I L
Sbjct: 712 RMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRL 771
Query: 449 CSIGKQYEAVMWLEEMISQAKLPD 472
C G EA + M+S+ PD
Sbjct: 772 CKRGLITEAKYFFVMMLSEGVTPD 795
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 209/483 (43%), Gaps = 44/483 (9%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R P+ ++ +IK ++ P AL+IF E+ + HN Y+++I L+ + +
Sbjct: 43 RKPKFISHETAVNLIKHERDPQHALEIFNLVVEQ-KGFNHNHATYSTIIDKLARAKKFQA 101
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLL 122
+ ++ QM ++C+ +S+F ++ +A++ + V +F + + ++ +T L
Sbjct: 102 VDALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCL 161
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG- 181
+V+ +++ L +K N+ + C+ + A V +EM
Sbjct: 162 NLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSI 221
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
YP+ +Y LM GLC RL EA L M +S+ D + Y L+ GK+
Sbjct: 222 SYPNLITYSTLMDGLCESGRLKEAIELFEEM---VSKDQILPDALTYNVLINGFSCWGKV 278
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A +I+E + G C+ P++ +YSA
Sbjct: 279 DRAKKIMEFMKSNG---------------CS---------------------PNVFNYSA 302
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ EGR+ E +EM+ G V Y + + G +DEA+ ++ EEM +
Sbjct: 303 LMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALL-EEMKET 361
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+ N+LL+G C G + A+ L ++S + G N +Y I+++ LC+ G +
Sbjct: 362 KCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSE-GIYLNKASYRIVLNSLCQKGDLDK 420
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A +L L R + P T N L+ GLC G +AV+ L + P+ W+ LV
Sbjct: 421 ALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVE 480
Query: 482 SVC 484
VC
Sbjct: 481 FVC 483
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 197/471 (41%), Gaps = 59/471 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T L + K K+ AL ++KE + N + ++I L + R+ E +E++D+M
Sbjct: 469 TLLDGLFKAGKTE-QALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
K C + T Y + GQL A L + + FN+ +
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI--------- 576
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
H + + W + I S EM +G P+ +Y
Sbjct: 577 -TGHFIAKQ----WHKVNDIHS----------------------EMSARGLSPNLVTYGA 609
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ G C + L+EA +L + M G ++ I L+ +GK+ +A +L+K+
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMV----NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL 665
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS--YSAMAIDLYNE 309
+ ID+ P IE K I G P A+ ++ + L
Sbjct: 666 VN------------IDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKS 713
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GRI + + + +R K F P Y + + G +DEA + + M+ P +
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS-LRDVMLSAGLTPNIIT 772
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ GLC +G + AV K+ + G NG TY L+D C++G+ EA ++ ++M
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSK-GISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P V TY++LI GLC+ G EA+ L++MI P+ + +L+
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 210/498 (42%), Gaps = 67/498 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +MI L + R+ E+++V+ +M+ + T I Y R G + +A + + +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ T ++NTLLK ++ A + FL G V S + L+D L +
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG--VAPNEISCSTLLDGLFKAG 478
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+++ AL++++E +G + +++ ++ GLC R+ EA LL R+ + D
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD----RMKELRCPPDS 534
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ YRTL C G++ A ++ K+ G AP + + + +
Sbjct: 535 LTYRTLFDGYCKLGQLGTATHLMNKMEHLGF-APSVEMFNSFITGHFIAKQWHKVNDIHS 593
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E RG P+L +Y A+ EG + E + EM G P++ + A ++ +K+G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653
Query: 346 MVDEALEVIEE----EMVKGTFVPTVRV---------------------YNILLKGLCDA 380
VDEA V+++ +M+ G + T+ + +N+++ GLC +
Sbjct: 654 KVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKS 713
Query: 381 GNSAVAVMYLKKMSKQ-------------VGCVANGE---------------------TY 406
G A A + + + GC A+G TY
Sbjct: 714 GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GLC+ G+ A + ++ + P TYN LI C GK EA ++M+
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833
Query: 467 QAKLPDISVWSSLVASVC 484
+ P + +S L+ +C
Sbjct: 834 EGIQPTVITYSILIYGLC 851
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 212/527 (40%), Gaps = 100/527 (18%)
Query: 9 LTPTYLSQIIKKQK-SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
LTP L +++ + P AL +F+ A + H A ++ IL+ + R + + +
Sbjct: 68 LTPALLQAALRRVRLDPDAALHLFRLAPSRPSLVSH-----AQLLHILARARRFHDARAL 122
Query: 68 IDQMKGDSCEC--------KDSVFATA-----IRTYARAGQLNEAVSLFKNLSQFNCVNW 114
+ + + +D F+ +R +A AGQL+ A+++F + + C
Sbjct: 123 LSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGC--- 179
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ S LRSC N L++ L Q +A V+
Sbjct: 180 ------------RPS---------LRSC------------NRLLNKLVQSGDPGMAAMVY 206
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M G PD + I+ K C D R+ +A + M G ++V Y ++
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM----EGMGLEVNLVAYHAVMDC 262
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C G +DA +ILE + RKGL + C DG +E A+ ++ E G I
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR-MEEAERVVKEMKETGDIV 321
Query: 295 SLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
M I+ Y GR+ + +V +EMR G +L +Y + L K G ++E +V
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 354 IEEE----------------------------------MVKGTFVPTVRVYNILLKGLCD 379
++E MV+ T YN LLKG C
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441
Query: 380 --AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
A + A+ + +L M K+ G N + L+DGL + G+ +A + +E L R
Sbjct: 442 LHAIDDALRLWFL--MLKR-GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V T+N +I GLC IG+ EA L+ M PD + +L C
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 124/272 (45%), Gaps = 17/272 (6%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESN-RITEMKEVIDQMKGDSCECKDSVFATAIR 88
+KE K N V MI S S I ++ V+D + + + ++ I
Sbjct: 649 FYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIF 708
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEV 147
++G++ +A SLF++L + ++++L+ ++ A LR +
Sbjct: 709 GLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA--FSLRDVMLSAGL 766
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
I + N L+ LC+ + A+++F ++ +G P+ +Y+ L+ C + + EA
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA-- 824
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ + ++ ++G ++ Y L++ LC QG +++A+++L++++ + + I
Sbjct: 825 --FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP-----NYIT 877
Query: 268 LCPCNDG----EDIEGAKSLINEALIRGGIPS 295
C G ++E L +E IRG +P+
Sbjct: 878 YCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 211/459 (45%), Gaps = 31/459 (6%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG-------DSCECKDSVFATAIRTY 90
Y ++ + V+ +L E+ + E +++ D+M DSC ++F + +
Sbjct: 175 YKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSC----NLFISHLSED 230
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWE 146
++ A+ +F + T S+N + + + ++ AH L L R C
Sbjct: 231 LDGIKI--ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI--- 285
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S + +++ CQ L + +EM +G P+ +Y+ ++ LC ++ EA
Sbjct: 286 --PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAE 343
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L M +G D VIY TL+ C G + A ++ +++ ++ + +P +
Sbjct: 344 RVLREMI----SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI-SPDFITYTA 398
Query: 267 DLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+C C G +E K L +E + + P +Y+A+ EG++ E + ++M
Sbjct: 399 VICGLCQTGRVMEADK-LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A L K G VD A E++ E KG + + YN L+ GLC AGN
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL-NIYTYNSLVNGLCKAGNIDQ 516
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AV +K M + G + TY L+D C+ + A +L +ML R P V T+NVL+
Sbjct: 517 AVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 575
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C G + L+ M+ + +P+ + ++SL+ C
Sbjct: 576 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 198/457 (43%), Gaps = 16/457 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F E E + N Y + L + R+ E +++ QM+ C ++T
Sbjct: 237 ALKVFVEFPEVGVCW--NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y + G+L + L + + ++N ++ + K K+ A + LR
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV-LREMISEG 353
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ L+D C+ A +F EM + PD +Y ++ GLC R+ EA
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L + M + + D V Y L+ C +GK+++A + ++L+ GL P +
Sbjct: 414 KLFHEMVCKRLEP----DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL-TPNIVTYTA 468
Query: 267 ---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
LC C + ++ A L++E +G ++ +Y+++ L G I + K++ +M
Sbjct: 469 LADGLCKCGE---VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
GF P V Y + A K + A E++ + M+ PTV +N+L+ G C +G
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ-MLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
LK M ++ G + N TY L+ C + + M + P TYN+
Sbjct: 585 EDGEKLLKWMLEK-GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LI+G C EA +M+ + +S +++L+
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 197/452 (43%), Gaps = 47/452 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
LK+ +E + K + N Y +I +L ++ ++ E + V+ +M + ++ T
Sbjct: 307 VLKLIEEMQIK--GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + G ++ A LF + ++ K+ I + G
Sbjct: 365 IDGFCKLGNVSSAYRLFDEM--------------------QKRKISPDFITYTAVICG-- 402
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
LCQ R A +F EM + PD +Y L+ G C + ++ EA
Sbjct: 403 --------------LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA- 447
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+S+ ++ Q G +IV Y L LC G++ A ++L ++ RKGL+ + +
Sbjct: 448 ---FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR-IVEGDKVLDEMRTK 325
C G +I+ A L+ + + G P +Y+ + +D Y + R +V ++L +M +
Sbjct: 505 VNGLCKAG-NIDQAVKLMKDMEVAGFHPDAVTYTTL-MDAYCKSREMVRAHELLRQMLDR 562
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V + + GM+++ ++++ + KG +P YN L+K C N
Sbjct: 563 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLIKQYCIRNNMRA 621
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ M + G V +G TY IL+ G C+ EA + +M+ + + V +YN LI
Sbjct: 622 TTEIYRGMCAK-GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+G K EA E+M + + D +++
Sbjct: 681 KGFYKRKKFLEARELFEQMRREGLVADREIYN 712
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G +E A L+ + +RG IP + SYS + G + K+++EM+ KG P+
Sbjct: 264 CQLGRVVE-AHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
Y + L K G V EA V+ E M+ P +Y L+ G C GN + A
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLRE-MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M K+ + TY ++ GLC+ GR +EA ++ EM+ + P TY LI G C
Sbjct: 382 DEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 440
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTADL------NVCRKTLE 498
GK EA +M+ P+I +++L +C C D +CRK LE
Sbjct: 441 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 156/372 (41%), Gaps = 47/372 (12%)
Query: 26 TALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
+A ++F E +++ P++ Y ++I L ++ R+ E ++ +M E + +
Sbjct: 376 SAYRLFDEMQKRKISPDF----ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
I Y + G++ EA SL + Q ++ L + K +++ A+ L C
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 144 -GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G E+ I + N L++ LC+ D A+ + ++M+ G +PD +Y LM C R +
Sbjct: 492 KGLELN--IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK----- 257
A LL M R Q +V + L+ C G ++D ++L+ +L KG+
Sbjct: 550 VRAHELLRQMLDRELQP----TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605
Query: 258 -----------------------------APKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
P + I + +++ A L + +
Sbjct: 606 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 665
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+G +++SY+A+ Y + +E ++ ++MR +G +Y + +G ++
Sbjct: 666 GKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 725
Query: 349 EALEVIEEEMVK 360
LE+ +E + K
Sbjct: 726 LTLELCDEAIEK 737
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 99/230 (43%), Gaps = 7/230 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+ K+ + + + Y +++ +S + E++ QM + F
Sbjct: 517 AVKLMKDME--VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + +G L + L K + + + ++N+L+K+ + + A ++ C
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + N+L+ C+ R A + ++M +G SY+ L+KG ++ EA
Sbjct: 635 VPDG-NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
L F ++ ++G D IY D+GK++ +++ ++ + K L
Sbjct: 694 EL----FEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 739
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 186/405 (45%), Gaps = 14/405 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HI 136
+ T I+ ++++A LF + + C ++ TL+K + + + A +
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L S YG K + S ++++D LC+ RR D A +F+EM QG P SY L+ G
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + EA L F + +G ++V + L+ LC +GK+ +A +LE ++++G+
Sbjct: 288 CCGGKWEEAKRL----FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 343
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C G D+ A+ L +G P + Y+ + ++ E
Sbjct: 344 VPNLLTYNSLIEGFCLVG-DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-TVRVYNILLK 375
K+ + M G P + Y A L LF+ G V +A ++ V G +P + +Y I L
Sbjct: 403 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG--IPGDLYIYGIFLN 460
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC G A+ K+ K + E + L+DGLC+ G+ A + E++
Sbjct: 461 GLCKNGCLFEAMELFNKL-KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYN++I C G+ +A + ++M PD +++L+
Sbjct: 520 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 205/458 (44%), Gaps = 27/458 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVI---DQMK--GDSCECKDSVFATAIRTYARAGQ 95
Y + P +S +LS +I +V +QM+ G S +C + +
Sbjct: 89 YSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC--CTLNILLNCLCNVNR 146
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+ E +++ + + + ++ TL+K + E ++ A +LF R + I +
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAI-TYG 205
Query: 156 LLMDVLCQCRRSDLALHVFQEM---------DFQGCYPDRESYHILMKGLCNDRRLNEAT 206
LM LC+ +AL + QEM +F+ P SY I++ LC DRR +EA
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK---PVVISYSIIIDALCKDRREDEAR 262
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L F + +G ++ Y +L+ C GK ++A ++ +++ +G++ + +
Sbjct: 263 DL----FEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ IE AK L+ + RG +P+L +Y+++ G + ++ M +KG
Sbjct: 319 IDVLCKEGKVIE-AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P ++ Y + K V+EA+++ + G P V+ Y LL GL G A
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGKVGDA 436
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M K G + YGI ++GLC++G EA + ++ + +E +N LI
Sbjct: 437 KKLFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLID 495
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK A E++ + PD+ ++ ++ C
Sbjct: 496 GLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 141/339 (41%), Gaps = 49/339 (14%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A F M + P S+ L+ GL + ++ +L M R+S G D
Sbjct: 80 AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQM--RLS--GISPDCCTLN 135
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
LL LC+ ++ + + ++ ILR
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILR------------------------------------ 159
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG IP + +Y+ + L E RI + + M+ G P+ + Y + L + G +
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISI 219
Query: 350 ALEVIEEEMVKGT------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
AL+ + +EM+ + F P V Y+I++ LC A ++M Q G
Sbjct: 220 ALK-LHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ-GMTPTV 277
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+Y L+ G C G++ EA R+ EM+ + P V T+NVLI LC GK EA LE
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337
Query: 464 MISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
MI + +P++ ++SL+ C DLN R+ + S
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCL-VGDLNSARELFVSMPS 375
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + Y +++ L + ++ + K++ MK ++ + + G L EA+
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF L +N + FN L+ + K KLE A LF E++ + + N+++
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF-EKLPQEELQPDVVTYNIMIHEF 532
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
C+ + A +FQ+M+ GC PD+ +Y L++G ++L + LL+ M R
Sbjct: 533 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 208/457 (45%), Gaps = 14/457 (3%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
I KE ++ Y N VY ++I I+ ++ D M + + I+
Sbjct: 289 ILKEMSDR--GYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG 346
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
Y ++ Q+ A L + + V +F +++ + + + ++A +LF+ K
Sbjct: 347 YCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA-LLFIMEMLLRNFKP 405
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
L LL+ LCQ + A+ ++ + +G + + + L+ GLC EA LL
Sbjct: 406 NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLL 465
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R G D + Y TL+ A C +GK+++ ++ E+++R+G++ + +
Sbjct: 466 KEMLER----GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFW 328
CN G+ IE A L +E G P +Y M ID Y R+ EG+K+ EM T
Sbjct: 522 LCNMGK-IEEAGGLWHECKKNGNFPDAYTYGIM-IDGYCKANRVEEGEKLFQEMVTMKIE 579
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-TVRVYNILLKGLCDAGNSAVAV 387
+ V+Y + A ++G + EA + ++ +G +P T Y+ L+ GL + G A
Sbjct: 580 QNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG--IPQTSATYSSLIHGLSNIGLVDSAN 637
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L +M K+ G N Y L+ G C+ G+ + +L+EM I + P TY ++I G
Sbjct: 638 QLLDEMRKE-GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMING 696
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C +G A L EM + +PD +++L C
Sbjct: 697 HCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 198/434 (45%), Gaps = 39/434 (8%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
V++T + + G + E SL N F + ++ N LL +VK ++++ ++ +F
Sbjct: 133 VYSTQFK-HLGFGVVFELFSLLANKGLFPSL---KTCNFLLSSLVKANEVKMSYQVFDIM 188
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
C+ V + + +++ C R D A+ +F++M+ G P+ +Y+ ++ GLC + R
Sbjct: 189 CH-CGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR 247
Query: 202 LNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYRT 230
L+EA M +S +G + V+Y T
Sbjct: 248 LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C G I A+QI + ++ G+ + + C + +E A+ L+ E L
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ-MEHAEHLLEEMLTG 366
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
GG+ + +++++ L + R + EM + F P+ + ++ L ++G EA
Sbjct: 367 GGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEA 426
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+E+ + KG F N L+ GLC+AG+ A LK+M ++ G V + +Y L+
Sbjct: 427 IELWYRLLEKG-FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER-GLVLDSISYNTLI 484
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
C++G+ E ++ EEM+ R P + TYN+L+ GLC++GK EA E
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF 544
Query: 471 PDISVWSSLVASVC 484
PD + ++ C
Sbjct: 545 PDAYTYGIMIDGYC 558
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 194/470 (41%), Gaps = 37/470 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
++++M+ R+ + E+ +M+ + I + G+L+EA + +
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ ++ L+ +VK + + A+ IL S G+ + + N L+D C+
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVV--YNTLIDGYCRIG 316
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-D 224
AL + +M G P+ + + L++G C ++ A HLL M G
Sbjct: 317 NISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFT 376
Query: 225 IVIYR---------TLLF---------------------ALCDQGKIQDAMQILEKILRK 254
VI+R LLF LC GK +A+++ ++L K
Sbjct: 377 SVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK 436
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G A + + C G E AK L+ E L RG + SY+ + + EG++ E
Sbjct: 437 GFAANTVTSNALIHGLCEAGSKEEAAK-LLKEMLERGLVLDSISYNTLILACCKEGKVEE 495
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G K+ +EM +G P + Y L L G ++EA + E G F P Y I++
Sbjct: 496 GFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDAYTYGIMI 554
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C A ++M + N YG L+ C +G EA R+ ++M R
Sbjct: 555 DGYCKANRVEEGEKLFQEMV-TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI GL +IG A L+EM + P++ +++L+ C
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 45/362 (12%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I AG EA L K + + V + S+NTL+ KE K+E L
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKL-KEEMVRRG 507
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + + N+L+ LC + + A ++ E G +PD +Y I++ G C R+ E
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567
Query: 207 HLLYSMF-WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M +I Q + V+Y TL+ A C+ G +++A ++ + + +G+ P++
Sbjct: 568 KLFQEMVTMKIEQ-----NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI--PQTS--- 617
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
A+YS++ L N G + +++LDEMR +
Sbjct: 618 -------------------------------ATYSSLIHGLSNIGLVDSANQLLDEMRKE 646
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + K G + + ++ I +EM P Y I++ G C GN
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHK-VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKA 705
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A L +M+ Q G V + TY L +G C++G+ EA +V + M TY LI
Sbjct: 706 AAKLLNEMA-QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Query: 446 RG 447
G
Sbjct: 765 DG 766
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 10/346 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N+L+ C L F EM+ GC P+ +Y+ L+ C R++EA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL SM S KG +++ Y ++ LC +G +++A +ILE++ KG + + +
Sbjct: 66 GLLKSM----SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
C +G + +I+ ++R G+ PS+ +Y+A+ + + + D+MR +
Sbjct: 122 LNGYCKEGNFHQAL--VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ Y + + G+++EA ++ E M + F P+V YN + G C
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNE-MTESGFSPSVVTYNAFIHGHCVLERMEE 238
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +++M ++ G + +Y ++ G CR G A ++ +EM+ + P TY+ LI
Sbjct: 239 ALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+GLC + + EA +EM+ PD +++L+ + C DLN
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE-GDLN 342
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 7/330 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L+D C+ R D A + + M +G P+ SY++++ GLC + + EA +L
Sbjct: 45 VVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILE 104
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + KG D V Y TLL C +G A+ I +++R G+ +P + +
Sbjct: 105 EMGY----KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV-SPSVVTYTALINS 159
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
++ A ++ IRG P+ +Y+ + +G + E ++L+EM GF PS
Sbjct: 160 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 219
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y A + ++EAL V++E MV+ P V Y+ ++ G C G A
Sbjct: 220 VVTYNAFIHGHCVLERMEEALGVVQE-MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 278
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++M ++ G + TY L+ GLC R EA + +EML P TY LI C
Sbjct: 279 QEMVEK-GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G +A+ +EMI + LPD +S L+
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 193/404 (47%), Gaps = 17/404 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + G+L + + F + + C+ ++NTL+ K +++ A L L+S
Sbjct: 17 IRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL-LKSMSSKG 75
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + S N++++ LC+ A + +EM ++G PD +Y+ L+ G C + ++A
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ M + G +V Y L+ ++C + AM+ +++ +GL+ P R +
Sbjct: 136 VIHAEMV----RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR-PNERTYTT 190
Query: 267 DLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ DG +G A ++NE G PS+ +Y+A R+ E V+ EM
Sbjct: 191 LI----DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG P +V Y ++ + G +D A + +++EMV+ P Y+ L++GLC+
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQ-MKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A ++M +G + TY L++ C +G +A + +EM+ + + P TY+
Sbjct: 306 LTEACDLSQEM-LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
VLI GL + EA L ++I + +P + +L+ + C N
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CSN 407
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 196/475 (41%), Gaps = 29/475 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + RI E ++ M + + I R G + EA + + +
Sbjct: 47 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++NTLL KE A H +R+ V + + L++ +C+
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG----VSPSVVTYTALINSMCK 162
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + A+ F +M +G P+ +Y L+ G LNEA +L M ++ G
Sbjct: 163 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM----TESGFSP 218
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y + C ++++A+ ++++++ KGL I C GE ++ A +
Sbjct: 219 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE-LDRAFQM 277
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E + +G P +YS++ L R+ E + EM G P Y + A
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G +++AL + +EM+ F+P Y++L+ GL + A L K+ + V +
Sbjct: 338 EGDLNKALH-LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE-SVPSD 395
Query: 404 ETYGILVD---------------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
TY L++ G C G EA RV E M+ R++ P YNV+I G
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 455
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSC 503
C G +A +EMI +P +L+ ++ + + + L SC
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSC 510
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
EM + +P V YN L+ C G A LK MS + G N +Y ++++GLCR+
Sbjct: 35 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCRE 93
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G EA +LEEM + + P TYN L+ G C G ++A++ EM+ P + +
Sbjct: 94 GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 153
Query: 477 SSLVASVCCNTADLNVCRKTLEQL 500
++L+ S+ C +LN + +Q+
Sbjct: 154 TALINSM-CKARNLNRAMEFFDQM 176
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M++ P V YNIL++G C G + +M + GC+ N TY L+D C+ G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMG 59
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA +L+ M + P + +YNV+I GLC G EA LEEM + PD ++
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 478 SLVASVC 484
+L+ C
Sbjct: 120 TLLNGYC 126
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 206/470 (43%), Gaps = 44/470 (9%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K+++ P L IF +A ++ + HN Y+ ++ L + + ++ QMK ++C
Sbjct: 62 LMKRERDPQGVLDIFNKASQQ-KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC 120
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH 135
++S+F +R ++R+ ++ + +F + V + + +T L ++ ++ +
Sbjct: 121 RFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSR 180
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMK 194
L L + + ++ N+L+ C+ + A V +EM G YP+ +Y LM
Sbjct: 181 KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
L R EA L M IS++G D V + ++ C G+++ A +IL+ + +
Sbjct: 241 CLFAHSRSKEAVELFEDM---ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 297
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G CN P++ +YSA+ G+I E
Sbjct: 298 G---------------CN---------------------PNVYNYSALMNGFCKVGKIQE 321
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ DE++ G V Y + ++G DEA++++ E T+ YN++L
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL-TYNVIL 380
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+GL G S A+ L + + G N +Y I+++ LC +G +A + L M R
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSE-GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
WP T+N L+ LC G V L + +P W ++V S+C
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
Query: 271 CNDGEDIEGAKSLINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GF 327
C +G DI A L+ E + R GI P+ +YS + L+ R E ++ ++M +K G
Sbjct: 207 CKNG-DINFA-FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGI 264
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P V + + + G V+ A ++++ M K P V Y+ L+ G C G A
Sbjct: 265 SPDPVTFNVMINGFCRAGEVERAKKILDF-MKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ K+ G + Y L++ CR+G EA ++L EM TYNV++RG
Sbjct: 324 QTFDEV-KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L S G+ EA+ L++ S+ + + ++ ++CCN
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 32 KEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTY 90
K + YPN Y++++ L +R E E+ + M D V F I +
Sbjct: 223 KRSGISYPN----SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGF 278
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
RAG++ A + + + C +++ L+ K K++ A F +K
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF-DEVKKTGLKLD 337
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
LM+ C+ +D A+ + EM C D +Y+++++GL ++ R EA +L
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
W +G + YR +L ALC G+++ A++ L + +G+ + + + +
Sbjct: 398 Q--W--GSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
C G G + LI I G IP S+ A+ + E ++V ++LD +
Sbjct: 454 CESGYTEIGVRVLIGFLRI-GLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PSL + S L + G + K+L + G P+ ++ + K+G ++ A
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFL 217
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V+EE G P Y+ L+ L S AV + M + G + T+ ++++G
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
CR G A ++L+ M P V Y+ L+ G C +GK EA +E+ D
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 473 ISVWSSLVASVCCN 486
+++L+ C N
Sbjct: 338 TVGYTTLMNCFCRN 351
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 212/507 (41%), Gaps = 44/507 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++ +++ TA++ + A+ + P + H+ A ++ +L + E +
Sbjct: 88 LDPIVVNLVVRGLSDSETAVRFYWWAESR-PGFDHSQFAIAYLVSLLFMDGNFALLSEFL 146
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++K S++ + Y RAG+ + + F + C + +N + +VK
Sbjct: 147 GRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKN 206
Query: 129 SKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + + G+ + S + LCQ R +L + +MD GC PD
Sbjct: 207 CCFDLVEKYYDMALAKGFCLTPFTYSR--WISALCQSNRIELVQELLVDMDKLGCSPDIW 264
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+ +I + LC RL +A ++ M KG+ D+V Y+T++ LCD K +A+ +
Sbjct: 265 ACNIYIYYLCKQNRLPDALQMVEKM----RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGL 320
Query: 248 LEKILRKGLKAP-----------------------KSRRHRIDL----CPCND------- 273
E+++++ LK SR +D+ C N
Sbjct: 321 WEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWR 380
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
I+ A +I+ G P + +Y+ + G + + +K++ +M T G P
Sbjct: 381 AGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYS 440
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L L K +D+A + + M G F TV NIL+ C A+ K+M
Sbjct: 441 YNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSC-NILIDAFCKTKKVKSALELFKEM 499
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ G A+ TYG L++GL G + A + E+ML P V YN+++ LC +G
Sbjct: 500 GYK-GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGH 558
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLV 480
A MI + PD +++L+
Sbjct: 559 FKRAQTIFSHMIQKEVSPDTVTFNTLI 585
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 6/313 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++I L ++N++ E E+ +M E ++ I + RAG +++A + +
Sbjct: 337 GALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRT 396
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++N LL +E A L +R V S N L+ LC+ + D
Sbjct: 397 NGCEPDIVTYNILLNHYCTIGMMEKAEKL-IRKMETSGVNPDRYSYNQLLKGLCKTHQLD 455
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A + G + D S +IL+ C +++ A L F + KG D V Y
Sbjct: 456 KAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALEL----FKEMGYKGMQADAVTY 511
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ L G A ++ E++L + P + I L + A+++ + +
Sbjct: 512 GTLINGLFSVGYYNLAEELFEQMLNAQID-PNVNLYNIMLHHLCKVGHFKRAQTIFSHMI 570
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P +++ + L R +E + +MRT+G P + ++ ++ L +G
Sbjct: 571 QKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKST 630
Query: 349 EALEVIEEEMVKG 361
A EV E M G
Sbjct: 631 LAYEVWEYMMENG 643
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ R+ + +++++MRTKG P +V Y+ ++ L + EA+ + EEMVK P V
Sbjct: 276 QNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG-LWEEMVKRDLKPDVF 334
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
L+ GLC N L + + Y L+ G R G +A +++
Sbjct: 335 SCGALIFGLC-KNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISF 393
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M P + TYN+L+ C+IG +A + +M + PD ++ L+ +C
Sbjct: 394 MRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLC 449
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ DEM G V Y + L K+ D + + + KG F T Y+ +
Sbjct: 179 ETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKG-FCLTPFTYSRWISA 237
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + + L M K +GC + I + LC+ R +A +++E+M + P
Sbjct: 238 LCQSNRIELVQELLVDMDK-LGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSP 296
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
V TY ++ GLC K EA+ EEM+ + PD+ +L+ +C N
Sbjct: 297 DVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNN 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+K D KGF + Y ++AL + ++ E++ + M K P + NI +
Sbjct: 213 EKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVD-MDKLGCSPDIWACNIYIY 271
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC A+ ++KM + G + TY +V GLC + +F EA + EEM+ R
Sbjct: 272 YLCKQNRLPDALQMVEKMRTK-GTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLK 330
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
P V + LI GLC K EA M++ + ++++L++
Sbjct: 331 PDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALIS 376
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K K +AL++FKE Y + + Y ++I L +E+ +QM +
Sbjct: 485 KTKKVKSALELFKEMG--YKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPN 542
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+++ + + G A ++F ++ Q T +FNTL+ + K S+ A LF
Sbjct: 543 VNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLF- 601
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ V+ + L+ L +S LA V++ M G DRE
Sbjct: 602 KDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDRE 649
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 223/509 (43%), Gaps = 73/509 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVS 101
N Y ++I L +R E +++ +M + C V F T I + + G++++A +
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR--------------------S 141
L + Q ++N+++ + K ++ A ++ + S
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345
Query: 142 CYG-WEVKSR-------------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
C G W+ ++ I + N M LC+ RS A +FQ M +G PD
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405
Query: 188 SYHILMKGLCNDRRLNEATHLLYSM-------------------------------FWRI 216
SY IL+ G + R + +L +SM F +
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+G D+V Y TL+ A C G++ DAM+ +++ GL+ H + C G D
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG-D 524
Query: 277 IEGAKSLINEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ AK L++E + +G P++ +S++ L NEGR+++ V + + G P++V +
Sbjct: 525 LVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFN 584
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-S 394
+ + G +++A V++ MV P V YN L+ G C +G ++ ++M
Sbjct: 585 SLIDGYCLVGKMEKAFGVLDA-MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLH 643
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K+V TY I++DGL GR A ++ EM+ ++TY +L++GLC
Sbjct: 644 KKVK--PTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLT 701
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASV 483
EA+ ++ + DI++ ++++ ++
Sbjct: 702 DEAITLFHKLGAMDCKFDITILNTVINAL 730
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 172/359 (47%), Gaps = 11/359 (3%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHV-FQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+++R N + LC +R+D A+ V M GC P+ SY+ ++K LC D R EA
Sbjct: 187 LRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEA 246
Query: 206 THLLYSMFWRISQKGS--GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
M R++++G D+V + T++ QG++ A ++ ++++KG++
Sbjct: 247 ----LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTY 302
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ I C ++ A+ ++ + + +G P +Y+A+ G E K+ +M
Sbjct: 303 NSIVDALCK-ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+KG P +V + + +++L K G +A E+ + KG +P + Y+ILL G G
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKG-HMPDLVSYSILLHGYATEGRF 420
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A M+ + G VAN + IL+ + G EA V EM + P V TY+
Sbjct: 421 ADMNNLFHSMADK-GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYST 479
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
LI C +G+ +A+ +MIS P+ V+ SL+ C + DL ++ + ++ S
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH-GDLVKAKELVSEMMS 537
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 195/440 (44%), Gaps = 24/440 (5%)
Query: 55 LSESNRITEMKEVI-DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNC 111
L + R E +V+ +M C + T I++ + EA+ + + +++ C
Sbjct: 201 LCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 260
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
SFNT++ K+ ++ A L + V+ + + N ++D LC+ R D A
Sbjct: 261 SPDVVSFNTVIHGFFKQGEVSKACNL-INEMVQKGVEPDVVTYNSIVDALCKARAMDKAE 319
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V ++M +G PD +Y ++ G E+ MF +++ KG IV + +
Sbjct: 320 LVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESA----KMFRKMTSKGLIPGIVTFNSF 375
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DGEDIEG----AKSLI 284
+ +LC G+ +DA +I + + KG H DL + G EG +L
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKG--------HMPDLVSYSILLHGYATEGRFADMNNLF 427
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ +G + + ++ + G + E V EM+ +G P +V Y ++A +
Sbjct: 428 HSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRM 487
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + +A+E + M+ P VY+ L+ G C G+ A + +M + N
Sbjct: 488 GRLADAMEKFSQ-MISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIV 546
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ ++ LC +GR ++A V ++ P + T+N LI G C +GK +A L+ M
Sbjct: 547 FFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 606
Query: 465 ISQAKLPDISVWSSLVASVC 484
+S PD+ +++LV+ C
Sbjct: 607 VSVGIEPDVVTYNTLVSGYC 626
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 187/452 (41%), Gaps = 40/452 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S + L + R + +E+ M ++ + YA G+ + +LF ++
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V FN L+ K ++ A ++F G V+ + + + L+ C+ R
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTE-MQGQGVRPDVVTYSTLISAFCRMGR 489
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ F +M G P+ YH L+ G C L +A L+ M +S+ +IV
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM---MSKGIPRPNIV 546
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +++ +LC++G++ DA + ++ G + + + C G+ +E A +++
Sbjct: 547 FFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK-MEKAFGVLDA 605
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P + +Y+ + G+I +G + EM K P+ V Y L LF G
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAVAVMY--------------- 389
A ++ E + GT V + Y ILLKGLC D + A+ + +
Sbjct: 666 TSAAKKMFHEMIDSGTAV-DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724
Query: 390 -----LKKMSKQ------------VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L K+ ++ G V N TYG+++ L ++G EA + M
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
P N +IR L G +A ++ ++
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 816
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 12/324 (3%)
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLC---NDRRLNEATHLLYSMFWRISQKGSGE 223
+D A H+F E+ QG + + + L + + L+ ++F RI ++ +G
Sbjct: 90 TDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGP 149
Query: 224 DIV-----IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+ Y L+ C + ++LR GL+ + C C+ E
Sbjct: 150 RVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDE 209
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--WPSLVMYEA 336
L++ G +P+ SY+ + L + R E ++ M +G P +V +
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ FK G V +A +I E + KG P V YN ++ LC A A + L++M +
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGV-EPDVVTYNSIVDALCKARAMDKAELVLRQMVDK 328
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G +G TY ++ G G + E++++ +M + P + T+N + LC G+ +
Sbjct: 329 -GVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD 387
Query: 457 AVMWLEEMISQAKLPDISVWSSLV 480
A + M ++ +PD+ +S L+
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILL 411
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 122/309 (39%), Gaps = 41/309 (13%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N ++S+I L R+ + +V + + F + I Y G++ +A
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + ++NTL+ K K++ ILF R +VK + ++++D L
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILF-REMLHKKVKPTTVTYSIVLDGL 660
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
R+ A +F EM G D ++Y IL+KGLC + +EA ++F ++
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI----TLFHKLGAMDC 716
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
DI I T++ AL + ++A + I GL
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAISTSGL------------------------- 751
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+P++++Y M +L EG + E D + M G PS + + L
Sbjct: 752 -----------VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800
Query: 342 FKDGMVDEA 350
+ G + +A
Sbjct: 801 LQKGDIVKA 809
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 204/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +++++ R++E ++D+M +T I G+++EA+
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 224
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ ++ +L + K A LF R +K+ + ++++D
Sbjct: 225 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKMEERNIKASVVQYSIVIDS 283
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D AL +F EM+ +G D +Y L+ GLCND + ++ +L M R
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR----N 339
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
D+V + L+ +GK+ +A ++ +++ +G+ AP + + ID C N +
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI-APDTITYNSLIDGFCKENC---L 395
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A + + + +G P + +YS + R+ +G ++ E+ +KG P+ + Y
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E + +G P+V Y ILL GLCD G A+ +KM K
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + + P V TYNV+I GLC G EA
Sbjct: 515 MTLGIG-IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
M +M PD ++ L+
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILI 596
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y R +L A S+ + T +F+TL+ E ++ A L R E
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV---E 197
Query: 147 VKSR--IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+K R + +++ L++ LC R AL + M G PD +Y ++ LC + N
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC--KSGNS 255
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L +F ++ ++ +V Y ++ +LC G DA+ + ++ KG+KA
Sbjct: 256 ALAL--DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 313
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ CNDG+ +GAK ++ E + R IP + ++SA+ EG+++E ++ +EM T
Sbjct: 314 SLIGGLCNDGKWDDGAK-MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 372
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P + Y + + K+ + EA ++ + + KG P + Y+IL+ C A
Sbjct: 373 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVD 431
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +++S + G + N TY LV G C+ G+ A + +EM+ R P V TY +L
Sbjct: 432 DGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 490
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC G+ +A+ E+M I +++ ++ +C
Sbjct: 491 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 42/440 (9%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRI 151
++N+A+ LF+++ Q + FN L + + + + L L C G E ++ +
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYD----LVLGFCKGMELNGIEHDM 134
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ ++++ C+ ++ A V G PD ++ L+ G C + R++EA L+
Sbjct: 135 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194
Query: 212 MFW-------------------------------RISQKGSGEDIVIYRTLLFALCDQGK 240
M R+ + G D V Y +L LC G
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+ + K+ + +KA + + C DG + A SL NE ++G + +YS
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS-FDDALSLFNEMEMKGIKADVVTYS 313
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L N+G+ +G K+L EM + P +V + A + K+G + EA E+ E + +
Sbjct: 314 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 373
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P YN L+ G C A M + GC + TY IL++ C+ R
Sbjct: 374 G-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVD 431
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ R+ E+ + P TYN L+ G C GK A +EM+S+ P + + L+
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Query: 481 ASVCCNTADLNVCRKTLEQL 500
+C N +LN + E++
Sbjct: 492 DGLCDN-GELNKALEIFEKM 510
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + K+ L A +++ E + + Y S+I + N + E
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEAN 399
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M CE ++ I +Y +A ++++ + LF+ +S + T ++NTL+
Sbjct: 400 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 459
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL AA LF + V + + +L+D LC + AL +F++M
Sbjct: 460 CQSGKLNAAKELF-QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+I++ G+CN ++++A +S+F +S KG D+V Y ++ LC +G + +A
Sbjct: 519 IGIYNIIIHGMCNASKVDDA----WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ G P + I + G + + LI E + G + +S M ID
Sbjct: 575 MLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVELIEEMKV-CGFSADSSTIKMVID 632
Query: 306 LYNEGRI 312
+ ++ R+
Sbjct: 633 MLSDRRL 639
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 187/404 (46%), Gaps = 18/404 (4%)
Query: 85 TAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+ +A+ K L+Q +N S+ TL+ + K AA I FLR
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRAA-IKFLRKID 191
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G K + N ++D +C+ + A +F EM +G D +Y+ L+ G C +L
Sbjct: 192 GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M K ++ Y L+ ALC +GK+++A +L +L+ +K
Sbjct: 252 EAIGLLNEMVL----KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD---- 303
Query: 264 HRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I DG +++ A+ + N + G P + +Y+ + + E +
Sbjct: 304 -VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM K P +V Y + + L K G + ++I+E +G + Y+ L+ GLC
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI-TYSSLIDGLCK 421
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G+ A+ KM Q N T+ IL+DGLC+ GR +A V +++L + Y V
Sbjct: 422 NGHLDRAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYNV+I G C G EA+ L +M +P+ + +++ ++
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 192/399 (48%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + GQ+ S+ + + T + NTL+K + + +++ A + F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA-LHFHDKLLAQG 159
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S L++ +C+ + A+ +++D + PD Y+ ++ +C + ++EA
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA- 218
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
Y +F ++ KG D+V Y TL++ C GK+++A+ +L +++ K + P + I
Sbjct: 219 ---YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTIN-PNVYTYNI 274
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C +G+ ++ AKS++ L P + +YS + + + + V + M
Sbjct: 275 LVDALCKEGK-VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + K+ MVDEAL + +E M + VP + Y+ L+ GLC +G +
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKE-MHQKNMVPGIVTYSSLIDGLCKSGRISY 392
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ +M + G A+ TY L+DGLC++G A + +M + P + T+ +L+
Sbjct: 393 VWDLIDEMRDR-GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +A ++++++ ++ ++ ++ C
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 22/391 (5%)
Query: 106 LSQFN---CVNWTQ---SFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+SQFN C+ T FN +L K + + +H L L+ ++ + +LN
Sbjct: 44 VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG-----IQPDLITLN 98
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C + V ++ +G PD + + L+KGLC ++ +A H +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF----HDK 154
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G + V Y TL+ +C G + A++ L KI + L P + + +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGR-LTKPDVVMYNTIIDAMCKYQ 213
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A L +E ++G + +Y+ + G++ E +L+EM K P++ Y
Sbjct: 214 LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYN 273
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA V+ M+K P V Y+ L+ G A MS
Sbjct: 274 ILVDALCKEGKVKEAKSVLAV-MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS- 331
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+G + TY IL++G C++ EA + +EM ++ P + TY+ LI GLC G+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++EM + + D+ +SSL+ +C N
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 49/389 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I + + ++E + +M + T I + G+L EA+ L +
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++N L+ + KE K+ EA +L L++C VK + + + LMD
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC----VKPDVITYSTLMDGYFL 316
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A HVF M G PD +Y IL+ G C ++ ++EA +L F + QK
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL----FKEMHQKNMVP 372
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
IV Y +L+ LC G+I L
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVW------------------------------------DL 396
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I+E RG + +YS++ L G + + ++M+ + P++ + L L K
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G + +A EV ++ + KG + V YN+++ G C G A+ L KM GC+ N
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHL-NVYTYNVMINGHCKQGLLEEALTMLSKMEDN-GCIPNA 514
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR 432
T+ ++ L + +A ++L +M+ R
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 42/251 (16%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L K K AL +FKE +K N Y+S+I L +S RI+ +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ID+M+ +++ I + G L+ A++LF +
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD----------------- 437
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
E++ I + +L+D LC+ R A VFQ++ +G + +
Sbjct: 438 -------------------QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y++++ G C L EA +M ++ G + + T++ AL + + A
Sbjct: 479 VYTYNVMINGHCKQGLLEEA----LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534
Query: 246 QILEKILRKGL 256
++L +++ +GL
Sbjct: 535 KLLRQMIARGL 545
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 204/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +++++ R++E ++D+M +T I G+++EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ ++ +L + K A LF R +K+ + ++++D
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKMEERNIKASVVQYSIVIDS 254
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D AL +F EM+ +G D +Y L+ GLCND + ++ +L M R
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR----N 310
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
D+V + L+ +GK+ +A ++ +++ +G+ AP + + ID C N +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI-APDTITYNSLIDGFCKENC---L 366
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A + + + +G P + +YS + R+ +G ++ E+ +KG P+ + Y
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E + +G P+V Y ILL GLCD G A+ +KM K
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + + P V TYNV+I GLC G EA
Sbjct: 486 MTLGIG-IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
M +M PD ++ L+
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILI 567
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y R +L A S+ + T +F+TL+ E ++ A L R E
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV---E 168
Query: 147 VKSR--IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+K R + +++ L++ LC R AL + M G PD +Y ++ LC + N
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC--KSGNS 226
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L +F ++ ++ +V Y ++ +LC G DA+ + ++ KG+KA
Sbjct: 227 ALAL--DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ CNDG+ +GAK ++ E + R IP + ++SA+ EG+++E ++ +EM T
Sbjct: 285 SLIGGLCNDGKWDDGAK-MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P + Y + + K+ + EA ++ + + KG P + Y+IL+ C A
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVD 402
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +++S + G + N TY LV G C+ G+ A + +EM+ R P V TY +L
Sbjct: 403 DGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC G+ +A+ E+M I +++ ++ +C
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 42/440 (9%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRI 151
++N+A+ LF+++ Q + FN L + + + + L L C G E ++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYD----LVLGFCKGMELNGIEHDM 105
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ ++++ C+ ++ A V G PD ++ L+ G C + R++EA L+
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 212 MFW-------------------------------RISQKGSGEDIVIYRTLLFALCDQGK 240
M R+ + G D V Y +L LC G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+ + K+ + +KA + + C DG + A SL NE ++G + +YS
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS-FDDALSLFNEMEMKGIKADVVTYS 284
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L N+G+ +G K+L EM + P +V + A + K+G + EA E+ E + +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P YN L+ G C A M + GC + TY IL++ C+ R
Sbjct: 345 G-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVD 402
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ R+ E+ + P TYN L+ G C GK A +EM+S+ P + + L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 481 ASVCCNTADLNVCRKTLEQL 500
+C N +LN + E++
Sbjct: 463 DGLCDN-GELNKALEIFEKM 481
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + K+ L A +++ E + + Y S+I + N + E
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M CE ++ I +Y +A ++++ + LF+ +S + T ++NTL+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL AA LF + V + + +L+D LC + AL +F++M
Sbjct: 431 CQSGKLNAAKELF-QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+I++ G+CN ++++A +S+F +S KG D+V Y ++ LC +G + +A
Sbjct: 490 IGIYNIIIHGMCNASKVDDA----WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ G P + I + G + + LI E + G + +S M ID
Sbjct: 546 MLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVELIEEMKV-CGFSADSSTIKMVID 603
Query: 306 LYNEGRI 312
+ ++ R+
Sbjct: 604 MLSDRRL 610
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 10/441 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N + ++I L +I E+ + D+M G+ + + T I + G + A+
Sbjct: 134 HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAI 193
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L +++ Q NC + +++ + K+ ++ A LF + + I + N L+
Sbjct: 194 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH-QGISPSIFTYNSLIHA 252
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC + EM P+ + ++ LC + ++ EA ++ M R G
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR----G 308
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y L+ C + ++ +A+++ + ++ KG AP + + + IE A
Sbjct: 309 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF-APDVVSYSTLINGYCKIQRIEKA 367
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L E + IP+ +YS + L + GR+ + + EM T+G P V Y L
Sbjct: 368 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 427
Query: 341 LFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K+ +DEA+ +++ ++G+ + P +++Y I++ G+C AG A +S + G
Sbjct: 428 LCKNRRLDEAIALLKA--IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK-GL 484
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY I+++GLC+ G EAS++ EM + Y P TYN++ RG + +
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544
Query: 460 WLEEMISQAKLPDISVWSSLV 480
L+EM+++ D+S + LV
Sbjct: 545 LLQEMLARGFSADVSTSTVLV 565
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 186/395 (47%), Gaps = 16/395 (4%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRI 151
L++A+S F + + F LL + K + L +H + + + I
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM-----DSFGIPPNI 103
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+LN+L++ C +R A V ++ G P+ +++ L++GLC + ++ E HL
Sbjct: 104 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL--- 160
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F ++ +G ++V Y TL+ LC G A+++L + + + I C
Sbjct: 161 -FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 219
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D + A +L +E + +G PS+ +Y+++ L N +L+EM P++
Sbjct: 220 KD-RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 278
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V++ + AL K+G V EA +V++ M+K P V YN L+ G C AV
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDM-MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M + G + +Y L++G C+ R +A + EEM + P TY+ L+ GLC +
Sbjct: 338 TMVCK-GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 396
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ +A+ EM+++ ++PD + L+ +C N
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+++I + RI + + ++M ++T + G+L +A++LF +
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ S+ LL + K +L+ A I L++ G + IQ +++D +C+
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEA-IALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--------------- 212
+ A +F + +G +P+ +Y I++ GLC L EA+ L M
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529
Query: 213 ---FWRISQ-------------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
F R ++ +G D+ L+ L D G Q QIL + L+
Sbjct: 530 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 189/418 (45%), Gaps = 45/418 (10%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQ 108
+++ IL ++ M + I + + + F I +A AG+ +EAV F + +
Sbjct: 107 AVVPILLATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGE 166
Query: 109 FNCVNWTQSFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
F C T +N +L+ +V + A L+ R + +R + N+LMD LC+ +
Sbjct: 167 FGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNR-ATYNVLMDGLCKRGTA 225
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL +F EM +G P+ +++ IL+ +CN +L EA +LL SM KG D V
Sbjct: 226 VDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSM----EDKGCPPDEVT 281
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L LC G++ +A++ LE + R G
Sbjct: 282 YNAFLSGLCKAGRVDEAIERLEALRRTG-------------------------------T 310
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDK-VLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G L YS + L+ GR EG + ++ + F P +V+Y + + G
Sbjct: 311 FVLG----LKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGR 366
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D+A +EM + F P YN LLK LCD+G+ A + +M+ Q V + T+
Sbjct: 367 IDDAFAFF-DEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMA-QNNVVLDTNTH 424
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
I++ GLC+ EA +V + M+ P V TYNVLI GL + EA M +M
Sbjct: 425 TIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM 482
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/506 (20%), Positives = 202/506 (39%), Gaps = 86/506 (16%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTY-ARAGQLNEAVSLFKN 105
+ ++I + + R E + +M+G+ C V+ +R A G + A++L+
Sbjct: 140 FEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNR 199
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C+ ++N L+ + K A LF + +++ +L+ +C
Sbjct: 200 MVAAGCLPNRATYNVLMDGLCKRGTAVDALKLF-DEMLQRGITPNVKTHTILLSSMCNAG 258
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH------------------ 207
+ A ++ M+ +GC PD +Y+ + GLC R++EA
Sbjct: 259 QLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGY 318
Query: 208 --LLYSMFWR-------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
L+ +F + Q DIV+Y ++ + G+I DA +++
Sbjct: 319 SCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMK 378
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
K P + + L D D++GA+SL++E + +++ M L + +
Sbjct: 379 EKRF-TPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLV 437
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA------LEVIEE---------- 356
E +V D M G P+++ Y + L++ ++EA +EV
Sbjct: 438 DEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLG 497
Query: 357 ---------------------------EMVKGTF----VPTVRVYNILLKGLCDAGNSAV 385
++++G VP V YN LL GLC N
Sbjct: 498 ANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDG 557
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +++ + G + TYG L+D L R R+ +A + +++L P + YN ++
Sbjct: 558 ALRLFRELQVK-GFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIM 616
Query: 446 RGLCSIGKQYEAV-MWLEEMISQAKL 470
R LC + K +A+ W + ++ + L
Sbjct: 617 RSLCRMNKLSQAINFWFDHLLKKYNL 642
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 7/306 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI-SQKGSGEDIVIYRTLLFALCDQG 239
G P ++ L+ + R +EA F R+ + G +Y +L L G
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAV----DAFSRMEGEFGCRPTTFVYNAVLRVLVASG 187
Query: 240 KIQD-AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ A+ + +++ G ++ + + C G ++ K L +E L RG P++ +
Sbjct: 188 GVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALK-LFDEMLQRGITPNVKT 246
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++ + + N G++ E + +L+ M KG P V Y A L+ L K G VDEA+E +E
Sbjct: 247 HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 306
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
GTFV ++ Y+ L+ GL AG ++ +Q + Y I++ G GR
Sbjct: 307 RTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGR 366
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A +EM + + P YN L++ LC G A + EM + D + +
Sbjct: 367 IDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTI 426
Query: 479 LVASVC 484
++ +C
Sbjct: 427 MIHGLC 432
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P L S + + I L + D + D + G P +EA + A G EA++
Sbjct: 101 PLLHSRAVVPILLATDADAAMYDAIADA-QAAGLQPPAAAFEALIFAHASAGRHHEAVDA 159
Query: 354 IEEEMVKGTF--VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++G F PT VYN +L+ L +G + L GC+ N TY +L+D
Sbjct: 160 FSR--MEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMD 217
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GLC+ G ++A ++ +EML R P V+T+ +L+ +C+ G+ EA L M + P
Sbjct: 218 GLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPP 277
Query: 472 DISVWSSLVASVC 484
D +++ ++ +C
Sbjct: 278 DEVTYNAFLSGLC 290
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 185/434 (42%), Gaps = 34/434 (7%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + G L EA +F+ + + V S N L + K+ A I+ R
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + S N+++ +CQ R + A H+ M+ +G PD SY ++ G C
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719
Query: 202 LNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYRT 230
L++ L+ M F + +G D ++Y T
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C +G I+ A + ++ + + I C G+ +E K L +E L R
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMLCR 838
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +++ + G I + +V + M G P++V Y + L K+G +D A
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E++ E M K P + YN ++ GLC +GN AV + + + G A+ TY L+
Sbjct: 899 NELLHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLM 956
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D C+ G +A +L EML + P + T+NVL+ G C G + L M+++
Sbjct: 957 DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1016
Query: 471 PDISVWSSLVASVC 484
P+ + ++ LV C
Sbjct: 1017 PNATTFNCLVKQYC 1030
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 16/410 (3%)
Query: 82 VFATAIRTYARAGQLN--EAVSLFKNLSQFNCVNW---TQSFNTLLKEMVKESKLEAAHI 136
V + I ++ +LN E+ F +L + +W + F+ + +V+ L A
Sbjct: 560 VAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARK 619
Query: 137 LFLRSC-YGWEVKSRIQSLNLLMDVLCQ-CRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F + YG + + S N+ + L + C ++ A+ VF+E G + SY+I++
Sbjct: 620 VFEKMLNYGLVLS--VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIH 677
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+C R+NEA HLL M KG D++ Y T++ C G++ +++EK+ +K
Sbjct: 678 FVCQLGRINEAHHLLLLM----ELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
GLK I C + E A+ +E + +G +P Y+ + G I
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAE-AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRA 792
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K EM ++ P ++ Y A ++ + G + EA ++ E + +G P + + L+
Sbjct: 793 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG-LEPDIITFTELM 851
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C AG+ A M Q GC N TY L+DGLC++G A+ +L EM
Sbjct: 852 NGYCKAGHIKDAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYN ++ GLC G EAV + E + D +++L+ + C
Sbjct: 911 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 201/470 (42%), Gaps = 14/470 (2%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
YL+++ K TA+ +F+E E + N Y +I + + RI E ++ M+
Sbjct: 639 YLARLSKDCNKTATAIIVFREFPEVGVCW--NVASYNIVIHFVCQLGRINEAHHLLLLME 696
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
++T I Y R G+L++ L + + Q + ++ +++ + + KL
Sbjct: 697 LKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLA 756
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYH 190
A F G + L+D C +R D+ A F EM + PD +Y
Sbjct: 757 EAEEAF-SEMIGQGILPDTIVYTTLVDGFC--KRGDIRAASKFFYEMHSRDITPDVLTYT 813
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ G C + EA L + M R G DI+ + L+ C G I+DA ++
Sbjct: 814 AIISGFCQIGDMVEAGKLFHEMLCR----GLEPDIITFTELMNGYCKAGHIKDAFRVHNH 869
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+++ G + C +G D++ A L++E G P++ +Y+++ L G
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 928
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I E K++ E G V Y + A K G +D+A E++ E + KG PT+ +
Sbjct: 929 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG-LQPTIVTF 987
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N+L+ G C G L M + G N T+ LV C A+ + ++M
Sbjct: 988 NVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMC 1046
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
R P +TY L++G C+ EA +EM + +S +S L+
Sbjct: 1047 SRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 144/353 (40%), Gaps = 47/353 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + E ++ +M E F + Y +AG + +A + ++
Sbjct: 811 TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHM 870
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ TL+ + KE L++A+ L L + ++ I + N +++ LC+
Sbjct: 871 IQAGCSPNVVTYTTLIDGLCKEGDLDSANEL-LHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ + E + G D +Y LM C +++A +L M KG IV
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML----GKGLQPTIV 985
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR-----------RHRI--------D 267
+ L+ C G ++D ++L +L KG+ AP + R+ + D
Sbjct: 986 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-APNATTFNCLVKQYCIRNNLKAATAIYKD 1044
Query: 268 LCP-----------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+C CN +++ A L E +G S+++YS + +
Sbjct: 1045 MCSRGVEPDGKTYENLVKGHCN-ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMY----EAKLAALFKDGMVDEALEVIEEEMV 359
+ VE ++ D+MR G ++ + K D +VD E+IE +V
Sbjct: 1104 KFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1156
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 10/441 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N + ++I L +I E+ + D+M G+ + + T I + G + A+
Sbjct: 125 HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAI 184
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L +++ Q NC + +++ + K+ ++ A LF + + I + N L+
Sbjct: 185 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH-QGISPSIFTYNSLIHA 243
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC + EM P+ + ++ LC + ++ EA ++ M R G
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR----G 299
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y L+ C + ++ +A+++ + ++ KG AP + + + IE A
Sbjct: 300 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF-APDVVSYSTLINGYCKIQRIEKA 358
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L E + IP+ +YS + L + GR+ + + EM T+G P V Y L
Sbjct: 359 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 418
Query: 341 LFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K+ +DEA+ +++ ++G+ + P +++Y I++ G+C AG A +S + G
Sbjct: 419 LCKNRRLDEAIALLKA--IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK-GL 475
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY I+++GLC+ G EAS++ EM + Y P TYN++ RG + +
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 535
Query: 460 WLEEMISQAKLPDISVWSSLV 480
L+EM+++ D+S + LV
Sbjct: 536 LLQEMLARGFSADVSTSTVLV 556
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 186/395 (47%), Gaps = 16/395 (4%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRI 151
L++A+S F + + F LL + K + L +H + + + I
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM-----DSFGIPPNI 94
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+LN+L++ C +R A V ++ G P+ +++ L++GLC + ++ E HL
Sbjct: 95 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL--- 151
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F ++ +G ++V Y TL+ LC G A+++L + + + I C
Sbjct: 152 -FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 210
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D + A +L +E + +G PS+ +Y+++ L N +L+EM P++
Sbjct: 211 KD-RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 269
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V++ + AL K+G V EA +V++ M+K P V YN L+ G C AV
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDM-MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M + G + +Y L++G C+ R +A + EEM + P TY+ L+ GLC +
Sbjct: 329 TMVCK-GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 387
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ +A+ EM+++ ++PD + L+ +C N
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+++I + RI + + ++M ++T + G+L +A++LF +
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ S+ LL + K +L+ A I L++ G + IQ +++D +C+
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEA-IALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 460
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--------------- 212
+ A +F + +G +P+ +Y I++ GLC L EA+ L M
Sbjct: 461 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520
Query: 213 ---FWRISQ-------------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
F R ++ +G D+ L+ L D G Q QIL + L+
Sbjct: 521 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 222/506 (43%), Gaps = 58/506 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F E Y +G V + ++ S+ + + E+I++M+ + F
Sbjct: 213 ALSVFNEI---YGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVL 269
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGW 145
I + R ++++A+ LFK + + ++ L+ + + ++E A H+L G
Sbjct: 270 IHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGI 329
Query: 146 E----------------------VKSRIQSL---------NLLMDVLCQCRRSDLALHVF 174
+ ++ R++ L N +++ L + D A ++
Sbjct: 330 DPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLL 389
Query: 175 QEM-------DFQ---------GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
M +F+ P S+ I++ GLCN +L+ L S+F + +
Sbjct: 390 XAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLD----LALSLFRDMVR 445
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +++++Y L+ L + ++++ +L+++ G + + + I C C ED+
Sbjct: 446 VGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRR-EDVT 504
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
GA ++ E + G P + Y+ + L R E L EM +GF P +V Y A +
Sbjct: 505 GALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 564
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K VD+ALE+ + +G + P V YN L+ G C + A L +M + G
Sbjct: 565 DGFVKIKAVDQALEIFRDICARG-YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK-G 622
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
V + TY +L+DG C++G +A L M+ + P V TY LI GLC+ G+ +A+
Sbjct: 623 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAI 682
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
EM + P+ + +L+ +C
Sbjct: 683 HLWNEMRGKGCSPNRISFIALIHGLC 708
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 22/419 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
V + + T+++ G++++A L + + ++F L+ V++S+++ A LF +
Sbjct: 230 VLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLF-KK 288
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR- 200
+ + L+ LC + + ALH+ EM G PD + L+ C++
Sbjct: 289 MQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIP-YCSEEV 347
Query: 201 --------RL----NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
RL EA LLY+ G D Y LL A+ D ++
Sbjct: 348 DIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY--LLXAMTGD-NYTDNFEVN 404
Query: 249 EKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ + K + P + I + CN G+ ++ A SL + + G ++ Y+ + L
Sbjct: 405 KFFMVKEMVRPXTTSFSIVIDGLCNTGK-LDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 463
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
N R+ E +L EM+ GF P+ + + L + V AL+++ E V G P +
Sbjct: 464 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHG-HEPWI 522
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+ Y +L+K LC SA A +L +M ++ G + + Y +DG + +A +
Sbjct: 523 KHYTLLVKQLCKRKRSAEACNFLAEMVRE-GFLPDIVAYSAAIDGFVKIKAVDQALEIFR 581
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++ R Y P V YN LI G C + + EA L+EM+++ +P + ++ L+ C N
Sbjct: 582 DICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKN 640
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 209/525 (39%), Gaps = 104/525 (19%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
+LT + ++ KS A + F A ++ + HN Y +M LS + + + +
Sbjct: 92 MLTHEVVENVLSGLKSWKIAYRFFNWASDQ-GGFNHNCYTYNAMASCLSHARQNAPLSLL 150
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ C ++ A+ +++G ++ K + + ++L+
Sbjct: 151 SMDIVNSRC----AMSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCN 206
Query: 128 ESKLEAAHILFLRSCYG--WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + A +F YG W V + L++L+ +C D A + + M+ G +
Sbjct: 207 SRKFDKALSVF-NEIYGRGW-VDGHV--LSILVLTFSKCGEVDKAFELIERMEDLGIRLN 262
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+++ +L+ G R+++A L F ++ + G D+ +Y L+ LC + +I+ A+
Sbjct: 263 EKTFCVLIHGFVRQSRVDKALQL----FKKMQKSGFAPDVSVYDALIGGLCAKKEIEKAL 318
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L ++ G+ DI+ LI Y + +D
Sbjct: 319 HLLSEMKELGIDP-----------------DIQILSKLI-------------PYCSEEVD 348
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA--------------- 350
+Y R++E + L+++ T+ L++Y + L L VD+A
Sbjct: 349 IY---RLIE--ERLEDLDTEAM---LLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDN 400
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
EV + MVK P ++I++ GLC+ G +A+ + M + VGC N Y L+
Sbjct: 401 FEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVR-VGCKQNVLLYNNLI 459
Query: 411 DGLCRDGRFLE-----------------------------------ASRVLEEMLIRSYW 435
D L R E A ++ EM + +
Sbjct: 460 DKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHE 519
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P ++ Y +L++ LC + EA +L EM+ + LPDI +S+ +
Sbjct: 520 PWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 564
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ I G+L+ A+SLF+++ + C +N L+ ++ ++LE ++L L+
Sbjct: 420 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLL-LKEM 478
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + N + C CRR D+ AL + +EM G P + Y +L+K LC +
Sbjct: 479 KGSGFRPTQFTHNSIFG--CLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536
Query: 201 RLNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYR 229
R EA + L M F I +G D+V Y
Sbjct: 537 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 596
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ C ++ +A IL++++ KGL + + C +G DI+ A ++ +
Sbjct: 597 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNG-DIDQAFHCLSRMVG 655
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ P++ +Y+ + L N GR + + +EMR KG P+ + + A + L K G D
Sbjct: 656 KEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDA 715
Query: 350 AL----------------------------------EVIEEEMVKGTF 363
AL E+++E + KG F
Sbjct: 716 ALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKF 763
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 78 CKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
C D V + T I + + +++EA + + V ++N L+ K ++ A
Sbjct: 589 CPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFH 648
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
R G E + + + L+D LC R D A+H++ EM +GC P+R S+ L+ GL
Sbjct: 649 CLSRMV-GKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 707
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C + A LLY F + ++ + D ++Y L+ + A +IL++++ KG
Sbjct: 708 CKCGWPDAA--LLY--FREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKG 761
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 213/495 (43%), Gaps = 50/495 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK F A + + +G ++S++ +L+ E++ V++ MK + F+
Sbjct: 73 ALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSAL 132
Query: 87 IRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHILF------- 138
I Y +G L+ A+ LF + + NC+ + N+LL +VK K++ A L+
Sbjct: 133 ILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTD 192
Query: 139 -------------------------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++ +G + N+++D C++
Sbjct: 193 DGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIID--GYCKKG 250
Query: 168 DL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
DL A +E+ +G P E+Y L+ G C LL M + +G ++
Sbjct: 251 DLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM----AARGLNMNV 306
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
++ ++ A G + A + + ++ G + + + C G I+ A +
Sbjct: 307 KVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGR-IKEADEFLE 365
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+A RG +P+ SY+ + +G V+ +L + G P LV Y A + + G
Sbjct: 366 KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG 425
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D AL V E+ M KG F P ++YN+L+ GLC G + L +M + +
Sbjct: 426 EIDVALMVREKMMEKGVF-PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDR-NVQPDVYV 483
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ L+DG R+G EA ++ + ++ + P + YN +I+G C GK +A+ L +M
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543
Query: 466 SQAKLPDISVWSSLV 480
+ PD +S+++
Sbjct: 544 NVHHAPDEYTYSTVI 558
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 180/461 (39%), Gaps = 38/461 (8%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+I E + ++ G C + I Y + G L A K L + +++
Sbjct: 216 KIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYG 275
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+ K + EA L L + ++ N ++D + A + M
Sbjct: 276 ALINGFCKAGEFEAVDQL-LTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAE 334
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEA-------------------THLLYS--------- 211
GC PD +Y+ ++ C R+ EA T L+++
Sbjct: 335 MGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVK 394
Query: 212 ---MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M +RI++ G D+V Y + + G+I A+ + EK++ KG+ P ++ + + +
Sbjct: 395 AAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGV-FPDAQIYNVLM 453
Query: 269 CP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C +G K L++E L R P + ++ + G + E K+ + KG
Sbjct: 454 SGLCKNGR-FPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGV 512
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y A + K G + +AL + + M P Y+ ++ G + + A+
Sbjct: 513 DPGIVGYNAMIKGFCKFGKMTDALSCLNK-MKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+M K N TY L++G C+ + A +V M P V TY L+ G
Sbjct: 572 KMFGQMMKH-KFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGG 630
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
GK +A E M+ P+ + + L+ + NTA
Sbjct: 631 FFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL-TNTA 670
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 197/460 (42%), Gaps = 32/460 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+ ++I + +T+ E + +M C + + T I + G++ EA
Sbjct: 305 NVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFL 364
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + + S+ L+ K+ ++AA +LF + G K + S + +
Sbjct: 365 EKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGE--KPDLVSYGAFIHGVV 422
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D+AL V ++M +G +PD + Y++LM GLC + R LL M R Q
Sbjct: 423 VHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQ---- 478
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+ ++ TL+ G++ +A++I + I+RKG+ + + C G+ + A S
Sbjct: 479 PDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK-MTDALS 537
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+N+ P +YS + + + K+ +M F P+++ Y + +
Sbjct: 538 CLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI---- 593
Query: 343 KDGMVDEALEVIEEEMVKGT----FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+G +A + E++ +G VP V Y L+ G AG A + M G
Sbjct: 594 -NGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMN-G 651
Query: 399 CVANGETYGILVDGLC-----------RDGRFLEASRVLE--EMLIRSYWP-CVETYNVL 444
C N T+ L++GL +D E S +L+ M++ W + YN +
Sbjct: 652 CPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSV 711
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I LC G A + L +M+++ L D +++++ +C
Sbjct: 712 IVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLC 751
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 15/241 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+KIFK K + G Y +MI + ++T+ +++MK + ++T
Sbjct: 500 AIKIFKVIIRKGVDPGIVG--YNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTV 557
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y + ++ A+ +F + + ++ +L+ K++ + A +F R ++
Sbjct: 558 IDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF-RGMKSFD 616
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN-------- 198
+ + + L+ + + + A +F+ M GC P+ ++H L+ GL N
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLI 676
Query: 199 ---DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
D NE + L+ F + +G + I Y +++ LC G + A +L K+L KG
Sbjct: 677 EEKDSMENERS-LILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKG 735
Query: 256 L 256
Sbjct: 736 F 736
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 132/326 (40%), Gaps = 22/326 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ +Y ++ L ++ R MK ++ +M + + VFAT + + R G+L+EA+ +F
Sbjct: 445 DAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + +N ++K K K+ A + L + + ++D +
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA-LSCLNKMKNVHHAPDEYTYSTVIDGYVK 563
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGS 221
AL +F +M P+ +Y L+ G C + A + M F +
Sbjct: 564 QHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVP---- 619
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN--------- 272
++V Y TL+ GK + A I E +L G + H + N
Sbjct: 620 --NVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIE 677
Query: 273 DGEDIEGAKSLINE----ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+ + +E +SLI + L G +A+Y+++ + L G + +L +M TKGF
Sbjct: 678 EKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFL 737
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVI 354
V + A L L G E +I
Sbjct: 738 IDSVCFTAMLHGLCHKGKSKEWRNII 763
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 197/409 (48%), Gaps = 19/409 (4%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKL-EAAHIL 137
D FA+ + +R A+ LF ++ + T ++N +++ + + + L A L
Sbjct: 117 DRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYL 176
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L GW + + N L+ C+ + D+A +F +M +G D SY L++GLC
Sbjct: 177 SLMVRSGW--RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLC 234
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R++EA L M D+ +Y L+ LC+ + ++ + +L ++ G +
Sbjct: 235 EAGRIDEAVELFGEM--------DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWR 286
Query: 258 APKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P +R + +D C + + E A+ ++ E +G P + + +A+ EGR+ +
Sbjct: 287 -PSTRAYAAVVDF-RCRERKAKE-AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 343
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+VL+ M+ +G P++ Y A + +G V +A+ ++ + G P YN+L++
Sbjct: 344 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN-PDAVTYNLLIR 402
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G+ A L+ M G +A+ TY L++ LC+DGR +A + + + R
Sbjct: 403 GQCIDGHIESAFRLLRLMEGD-GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 461
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T+N LI GLC GK A +LE+M+S PD +SS + +C
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 188/425 (44%), Gaps = 12/425 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
YA++I L E+ RI E E+ +M ++A ++ A + E + + + +
Sbjct: 226 YATLIEGLCEAGRIDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEEGLLMLRRMK 281
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T+++ ++ +E K + A + L+ + + + + +++ C+ R
Sbjct: 282 ELGWRPSTRAYAAVVDFRCRERKAKEAEEM-LQEMFEKGLAPCVVTCTAVINAYCKEGRM 340
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V + M +GC P+ +Y+ L++G CN+ ++++A LL M G D V
Sbjct: 341 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM----RACGVNPDAVT 396
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C G I+ A ++L + GL A + + + C DG + A SL +
Sbjct: 397 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR-TDQACSLFDSL 455
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
RG P+ +++++ L G+ K L++M + G P Y + + L K
Sbjct: 456 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 515
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
E L I E M++ P+ Y I++ L N + +M GC + TY
Sbjct: 516 QEGLSFIGE-MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYT 573
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ C +GR EA VL EM YN L+ G SIG+ AV L++M S
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 633
Query: 468 AKLPD 472
A +P+
Sbjct: 634 ASVPN 638
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 192/498 (38%), Gaps = 62/498 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + YA+++ + E +E++ +M I Y + G++++A+
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLM 158
+ + + C ++N L++ E K+ A L +R+C V + NLL+
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC---GVNPDAVTYNLLI 401
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
C + A + + M+ G D+ +Y+ L+ LC D R ++A S+F +
Sbjct: 402 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC----SLFDSLET 457
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G + V + +L+ LC GK A + LEK++ G C E
Sbjct: 458 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 517
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
G S I E L + PS +Y+ + L E + EM + G P +V Y +
Sbjct: 518 GL-SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 576
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS---- 394
A +G ++EA V+ E G V T+ YN L+ G G + AV LK+M+
Sbjct: 577 RAYCIEGRLNEAENVLMEMSKNGVTVDTM-AYNTLMDGHASIGQTDHAVSILKQMTSVAS 635
Query: 395 -----------------------------------------------KQVGCVANGETYG 407
K+ + N TY
Sbjct: 636 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 695
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++G DGR EA+ ++ M S + Y L+ C + +A + + MI
Sbjct: 696 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 755
Query: 468 AKLPDISVWSSLVASVCC 485
+P + + L++ + C
Sbjct: 756 GFIPQLMSYQHLLSGLIC 773
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/483 (19%), Positives = 188/483 (38%), Gaps = 58/483 (12%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++I + R+++ V++ MK C+ + ++ + G++++A++L +
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
++N L++ + +E+A L LR G + + + N L++ LC+ R+D
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNALINALCKDGRTD 446
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F ++ +G P+ +++ L+ GLC + + A L M G D Y
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV----SAGCTPDTYTY 502
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+ + LC Q+ + + ++L+K +K P + + I + + E +
Sbjct: 503 SSFIEHLCKMKGSQEGLSFIGEMLQKDVK-PSTVNYTIVIHKLLKERNYGLVARTWGEMV 561
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P + +Y+ EGR+ E + VL EM G + Y + G D
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621
Query: 349 EALEVIEEE--------------------------------------------------- 357
A+ ++++
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 681
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K F+P Y+ +L+G + G + A + M K+ N + Y LV C+
Sbjct: 682 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM-KEDSISLNEDIYTALVTCFCKSK 740
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+L+A ++ M+ + P + +Y L+ GL G+ +A + PD VW
Sbjct: 741 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 800
Query: 478 SLV 480
++
Sbjct: 801 VII 803
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+M C + T++R Y G+LNEA ++ +S+ T ++NTL
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL-------- 610
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
MD ++D A+ + ++M P++ +Y
Sbjct: 611 ----------------------------MDGHASIGQTDHAVSILKQMTSVASVPNQFTY 642
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWR---ISQKGSGEDIV----------IYRTLLFALC 236
IL++ L R + + L + W+ ++ D++ Y ++L
Sbjct: 643 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ G+ ++A ++ + + + + C C ++ A L+ + G IP L
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPQL 761
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SY + L EG+ + ++ R K + P ++++ + L K G D + E+I
Sbjct: 762 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 819
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ SE R E ++ MK DS + ++ + + ++ + +A L
Sbjct: 690 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 749
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL-NLLMDVLC 162
++ Q + S+ LL ++ E + + A +F+ S W+ S + + +++D L
Sbjct: 750 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS--RWKDYSPDEIVWKVIIDGLI 807
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ SD++ + ++ C P ++Y +L + L
Sbjct: 808 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 216/470 (45%), Gaps = 24/470 (5%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K K A ++ KE E P N +Y ++I ++ ++ + E++D+MK +
Sbjct: 88 KAKRHEEAHRLLKEELE--PLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMD 145
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF- 138
+ +T I+ R G+++EA+ FK++ + C ++NT++ + K ++++ A LF
Sbjct: 146 VLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEALELFD 204
Query: 139 -----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+ +G E + S + ++D LC+ +R D A F+ M GC P+ +Y L+
Sbjct: 205 DMEKRYEASHGCE--PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLI 262
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC R +E LL M +KG G +I+ + +L AL + + A Q E++L+
Sbjct: 263 DGLCKVDRPSECLELLLHM----KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 318
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
G K P + + + ++ A ++ E + P + +YS++ GR+
Sbjct: 319 SG-KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 377
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+ D V M P V + L + EA V E+MV F+P ++ YN+L
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV-HEDMVNAGFIPGLQTYNVL 436
Query: 374 LKGLC--DAGNSAVAVMY-LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+ +C D+ SA+ + + +K+ +Q C TY L+ LCR R EA L+ M
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDC----NTYAPLIQCLCRARRVDEAKEFLDVME 492
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P + L+ LC G+ EA L+ ++ P + LV
Sbjct: 493 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 214/495 (43%), Gaps = 30/495 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRIT 62
P ++T + + K AL++F + +++Y P Y+++I L ++ R+
Sbjct: 178 PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 237
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ E +M+ C +++ I + + +E + L ++ + FN +L
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ K + E A F R + K + + N+ + LC+ R D A + EM
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD +Y ++ G C R+++A +F R+ V + TLL + K +
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKAD----DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSR 412
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A ++ E ++ G + + C C + +E A + ++ + P +Y+ +
Sbjct: 413 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCG-ADSVESALEIYHKMKRKKRQPDCNTYAPL 471
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L R+ E + LD M P+ + A + L K G VDEA V++ +V+
Sbjct: 472 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN-VVEVG 530
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKK-------MSKQVGCVANGETYGILVDGLCR 415
P + IL++ L YL+K + + G VA+ TY + V +C+
Sbjct: 531 CQPLGETFKILVEEL-----------YLRKKWEAASKLLRSPGFVADAATYSLCVAEICK 579
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G+ EA V+E+M+++ P TY ++R LC + + A+ E+M S+ P +
Sbjct: 580 AGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVT 639
Query: 476 WSSLVASVCCNTADL 490
++ L+ C +AD+
Sbjct: 640 YTLLIGEAC--SADM 652
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 160/374 (42%), Gaps = 58/374 (15%)
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ + +R + A + +E C+P+ Y ++ G C ++++A LL M
Sbjct: 81 VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM--- 137
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ-------------ILEKILRKGLKAPKSR 262
++G D++++ TL+ LC +G+I +A++ I + GL +
Sbjct: 138 -KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGL----CK 192
Query: 263 RHRID--------------------------------LCPCNDGEDIEGAKSLINEALIR 290
+RID LC + ++ A
Sbjct: 193 ANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALC---KAQRVDKAYEYFKRMRAV 249
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +YS++ L R E ++L M+ KGF +++ + A L AL+K+ ++A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ E ++K P V YN+ + GLC AG A L +M + + TY ++
Sbjct: 310 CQFF-ERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVES-KVTPDVITYSSII 367
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DG C+ GR +A V M++ P T+ L+ G K EA E+M++ +
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427
Query: 471 PDISVWSSLVASVC 484
P + ++ L+ VC
Sbjct: 428 PGLQTYNVLMDCVC 441
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 152/376 (40%), Gaps = 47/376 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y + L ++ R+ E ++ +M +++ I + +AG++++A
Sbjct: 322 KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADD 381
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F + C+ +F TLL + K A + + +Q+ N+LMD +
Sbjct: 382 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG-LQTYNVLMDCV 440
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C + AL ++ +M + PD +Y L++ LC RR++EA L M
Sbjct: 441 CGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM--------E 492
Query: 222 GEDIV----IYRTLLFALCDQGKIQDAMQILEKILRKG---------------------- 255
+++V I L+ LC QG++ +A +L+ ++ G
Sbjct: 493 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWE 552
Query: 256 -----LKAPK--SRRHRIDLCP---CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
L++P + LC C G+ E A +I + +++G P +Y A+
Sbjct: 553 AASKLLRSPGFVADAATYSLCVAEICKAGKPDE-AVEVIEQMVLKGVRPDEGTYVAVLRS 611
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L R+ ++M ++G P LV Y + M DEA + E MV F P
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIF-EAMVAAGFTP 670
Query: 366 TVRVYNILLKGLCDAG 381
+ L L DAG
Sbjct: 671 QAQTMRTLSSCLRDAG 686
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
VA + + + G N T +L++ + R EA R+L+E L +P Y +
Sbjct: 58 VAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTV 117
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I G C G+ +A L+EM + D+ + S+L+ +C
Sbjct: 118 INGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLC 157
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 214/501 (42%), Gaps = 49/501 (9%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYR-HNGPVYASMIGILSESNRIT 62
++ R L P + ++++ K +L F+ + HN ++ L ++ R
Sbjct: 27 KYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHH 86
Query: 63 EMKEVI-DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+ ++ D++ G C+ + T I + +AG + A L + + + +++
Sbjct: 87 QAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ + L A F S E N+L+ LC+ + A + +EM +G
Sbjct: 147 VQALCNTGNLSRAMQYFRES---VECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERG 203
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSM----------------------------- 212
PD +Y+ L+ GLC R+ EA LL +M
Sbjct: 204 IVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAH 263
Query: 213 --FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
R+ Q G+ D+V + +L+ C + KI A ++L +++KGL AP + + +
Sbjct: 264 QLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKKGLCAPNLVTYNVLISG 322
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
D A L++E RG +P + +Y+++ +I + ++ + M +G P
Sbjct: 323 LCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPD 382
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAV 385
+ Y AL K DEA +++ M +P + +N L++GLC D +
Sbjct: 383 GISYCTLAVALLKSERFDEAFALLDN-MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AVM ++VGC TY +LV GLC+ GR +A VL M+ P V + ++
Sbjct: 442 AVM------RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIV 495
Query: 446 RGLCSIGKQYEAVMWLEEMIS 466
L GKQ A+ + +++++
Sbjct: 496 HTLAREGKQDLALHYFDQVVA 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 166/386 (43%), Gaps = 52/386 (13%)
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ-EMDFQGCYPDRESYHILMKGLCN 198
RS G + + + N L+ L + RR A +F+ E+ Q C + +Y+ L+ G C
Sbjct: 59 RSHRGESIHNNF-TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCK 117
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ A LL M ++G D+V + +++ ALC+ G + AMQ + + A
Sbjct: 118 AGDMERAFQLLAEM----KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC---A 170
Query: 259 PKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P S I LC N + A+ +I E RG +P + +Y+++ L R+ E
Sbjct: 171 PDSVLFNILVHGLCKANQ---LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEA 227
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++L+ M + P+LV Y + K G A ++IE + GT P V +N L+
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH-PDVVTFNSLIS 286
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C A L M K + C N TY +L+ GLC GR EA +L EM R
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGL-CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 436 PCVETYNVLI---------------------RGLCSIGKQY--------------EAVMW 460
P + TYN LI RG+ G Y EA
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
L+ M +P++ ++SL+ +CC+
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCS 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 25/406 (6%)
Query: 87 IRTYARAGQLNEAVSLFKN--LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
+RT +A + ++A +F++ L Q +C ++NTL+ K +E A L
Sbjct: 76 LRTLVKARRHHQAYQIFRDELLGQ-HCDTNHITYNTLIGGFCKAGDMERAFQLL------ 128
Query: 145 WEVKSRIQSLNL-----LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
E+K R S ++ ++ LC A+ F+E C PD ++IL+ GLC
Sbjct: 129 AEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES--VECAPDSVLFNILVHGLCKA 186
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+L+EA ++ M S++G D+V Y +L+ LC ++++A Q+LE ++++ ++
Sbjct: 187 NQLSEARQMIEEM----SERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPN 242
Query: 260 KSRRHRIDLCPCNDGEDIEG-AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + C G G A LI + G P + +++++ + +I + +V
Sbjct: 243 LVTYNTLIYGYCKTG--CTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L M+ P+LV Y ++ L G +EA E++ E +G +P + YN L+ C
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG-ILPDIITYNSLIGIFC 359
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A ++ + + G + +G +Y L L + RF EA +L+ M P +
Sbjct: 360 RNFQIEQA-FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNL 418
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+N L+ GLC + EA L M P S + LV +C
Sbjct: 419 FTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 208/432 (48%), Gaps = 11/432 (2%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ S RI++ ++DQM + F T I + +EAV+L + Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L +K+ + N ++D LC+ R +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLA-LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+A+ +F EM+ +G P+ +Y+ L+ LCN R ++A+ LL +M +K ++V +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML----EKKINPNVVTF 331
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ E+++++ + P + + + + ++ AK + +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ +P++ +Y+ + R+ +G ++ EM +G + V Y + F+ G D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++ ++MV + Y+ILL GLC G A++ K + K N Y
Sbjct: 451 SA-QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNT 508
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ EA + + I+ P V TYN +I GLCS EA +M
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 566 TLPNSGTYNTLI 577
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 190/430 (44%), Gaps = 53/430 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
++++AV LF ++ + FN LL + K +K E + ++Q+L
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV----------ISLGEQMQTL 112
Query: 155 NLLMDVL-------CQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ D+ C CRRS LAL V +M G PD + L+ G C+ +R+++A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 206 -------------------THLLYSMFW------------RISQKGSGEDIVIYRTLLFA 234
T L++ +F ++ Q+G D+V Y T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G I A+ +L K+ +KA + I C +E A L E +G P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK-YRHVEVAVDLFTEMETKGIRP 291
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+++ L N GR + ++L M K P++V + A + A FK+G + EA E +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA-EKL 350
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EEM++ + P YN+L+ G C A K M + C+ N +TY L++G C
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNTLINGFC 409
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R + + EM R TY +I+G G A M ++M+S DI
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 475 VWSSLVASVC 484
+S L+ +C
Sbjct: 470 TYSILLHGLC 479
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 18/394 (4%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTL---LKEMVKESKLEAAHILFLRSCYGWEVKSR----I 151
V F NL C W +SF + +E+++ + + +G VKSR I
Sbjct: 26 TVPSFFNLCGSGC--WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSI 83
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
N L+ + + + +L + + ++M G D +Y I + C +L+ A +L
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G DIV +LL C +I DA+ ++++++ G K P + +
Sbjct: 144 MM----KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-PDTFTFTTLIHGL 198
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
A +L+++ + RG P L +Y + L G I +L++M ++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V++ + +L K V+ A+++ E KG P V YN L+ LC+ G + A L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 392 KM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M K++ N T+ L+D ++G+ +EA ++ EEM+ RS P TYN+LI G C
Sbjct: 318 NMLEKKIN--PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M+S+ LP+I +++L+ C
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 11/285 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I + ++ E +++ ++M S + + I + +L+EA +F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + +C+ Q++NTL+ K ++E LF V + + ++ Q
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF-Q 445
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A VF++M D +Y IL+ GLC+ +L+ A + ++ QK E
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL-----VIFKYLQKSEME 500
Query: 224 -DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+I IY T++ +C GK+ +A + + K P + + ++ A
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADD 556
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L + G +P+ +Y+ + + +++ EMR+ GF
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 193/467 (41%), Gaps = 80/467 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ + P AL +F + +E +RH+ P Y+S+I L++S + +++ ++ +
Sbjct: 56 LKEIEDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR 113
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++S+F I+ Y +AG +++AV +F L+ F+CV
Sbjct: 114 CRESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVR------------------------ 149
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
IQSLN L++VL + A F P+ S++IL+KG
Sbjct: 150 ------------TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ A + M Q +V Y +L+ LC + A +LE +++K ++
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPS----VVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIR 253
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P+ ++ + L G E K
Sbjct: 254 ------------------------------------PNAVTFGLLMKGLCCNGEYNEAKK 277
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P LV Y ++ L K G +DEA +++ EM K P +YNIL+ L
Sbjct: 278 LMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEA-KILLGEMKKRRIKPDFVIYNILVNHL 336
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A L +M + GC N TY ++VDG CR G F VL ML + P
Sbjct: 337 CTEGRVPEAYRTLTEMQMK-GCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPT 395
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ ++ GL G A LE M + S W +L+ +C
Sbjct: 396 PATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDLC 442
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
ED E A SL ++ G SYS++ L D++L +R + ++
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
A + K G VD+A++V + + V T++ N L+ L D G A + +
Sbjct: 120 MALIQHYGKAGWVDKAVDVFHK-LTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K + N ++ IL+ G + A +V +EML P V TYN LI LC
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDM 237
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A LE+MI + P+ + L+ +CCN
Sbjct: 238 GKATSLLEDMIKKRIRPNAVTFGLLMKGLCCN 269
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 209/458 (45%), Gaps = 55/458 (12%)
Query: 2 SVRWPRLLTPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN 59
S++W TP ++ I+K+ P AL FK +P+Y H + I I +
Sbjct: 53 SIQW----TPQLVNTILKRLWNHGP-KALHFFK-ILSHHPSYCHQASSFDHAIDICARLR 106
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ ++ +M+ FA YA G+ + AV++F ++ ++ C SFN
Sbjct: 107 DFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFN 166
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
T+L + K ++E A+ LF ++ G + K+ S N++++ C +R+ AL + +EM
Sbjct: 167 TILDVLCKSKRVEMAYNLF-KALKG-KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVE 224
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G P+ +Y+I++ G + NEA + F + ++ D+V Y +++ L G
Sbjct: 225 RGLTPNLTTYNIMLNGYFRAGQTNEA----WGFFLEMKKRKCDIDVVTYTSVIHGLGVVG 280
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+I+ A + ++++ G+ +PS+A++
Sbjct: 281 EIKRARNVFNQMVKDGV------------------------------------LPSVATF 304
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+A+ L + + + +EM +G+ P+ + Y + L G + A+E++ E M
Sbjct: 305 NALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELM-ERME 363
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---RD 416
P V+ YNIL++ CDAG + +KM C+ N +TY IL++ +
Sbjct: 364 DDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNG-DCLPNLDTYNILINSMFVRKNS 422
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
L A ++L EM+ R + P T+N ++ GL G Q
Sbjct: 423 DNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQ 460
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 45/333 (13%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ VF M GC+ D S++ ++ LC +R+ A Y++F + K D V Y
Sbjct: 146 AVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMA----YNLFKALKGKFKA-DCVSYN 200
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ C + A+++L++++ +GL
Sbjct: 201 IIVNGWCLIKRTPKALEMLKEMVERGLT-------------------------------- 228
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P+L +Y+ M + G+ E EM+ + +V Y + + L G +
Sbjct: 229 ----PNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKR 284
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A V + MVK +P+V +N L++ LC + A++ ++M K+ G V N TY ++
Sbjct: 285 ARNVFNQ-MVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR-GYVPNSITYNLV 342
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLC G A ++E M P V+TYN+LIR C G+ + + ++M +
Sbjct: 343 IRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDC 402
Query: 470 LPDISVWSSLVASVCC--NTADLNVCRKTLEQL 500
LP++ ++ L+ S+ N+ +L V K L ++
Sbjct: 403 LPNLDTYNILINSMFVRKNSDNLLVAGKLLVEM 435
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 210/513 (40%), Gaps = 82/513 (15%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++G++ R + + +M+ C F ++ + +L A+S F ++
Sbjct: 84 FCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKIT 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +FNTLL + E ++ A LF + C K + + LM+ LC+ R
Sbjct: 144 KLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC-----KPNVVTFTTLMNGLCREGRV 198
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCND----------RRLNEATHLL-------- 209
A+ + M G P++ +Y ++ G+C R++ E +H++
Sbjct: 199 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNT 258
Query: 210 --------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+++F + +K DIV Y ++ C G+ DA Q+L+++L +
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ + +G+ E A+ L +E L R IPS +YS+M + R+
Sbjct: 319 INPDVVTFSALINAFVKEGKFFE-AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE------------------- 356
+ + TKG P ++ + +A + VD+ ++++ E
Sbjct: 378 EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437
Query: 357 ---------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV---- 397
EM+ P V N LL GLCD G A+ K M K
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 497
Query: 398 ------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
G + +TY IL+ GL +G+FLEA + EEM R P TY+ +I GLC
Sbjct: 498 ASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ PD+ +++L+ C
Sbjct: 558 SRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A +F E +EK +P+ Y MI S R ++ ++++ +M F+
Sbjct: 272 AHNLFIEMQEKEIFPDIV----TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I + + G+ EA L+ + + + T ++++++ K+++L+AA H+ +L
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK 387
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G I + N L+ C+ +R D + + EM G + +Y L+ G C LN
Sbjct: 388 G--CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 445
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M G ++V TLL LCD GK++DA+++ + + + + SR
Sbjct: 446 AAQDLLQEMI----SSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR- 500
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
P N E P + +Y+ + L NEG+ +E +++ +EM
Sbjct: 501 ------PFNGVE------------------PDVQTYNILICGLINEGKFLEAEELYEEMP 536
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P + Y + + L K +DEA ++ + M +F P V +N L+ G C AG
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS-MGSKSFSPDVVTFNTLITGYCKAGMV 595
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M Q G VA+ TY L+ G + A + +EM+ +P T
Sbjct: 596 DDGLELFCEMG-QRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRN 654
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ GL S + AV LE++
Sbjct: 655 MLTGLWSKEELERAVAMLEDL 675
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 45/369 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S +LM C C + AL F ++ G +P +++ L+ GLC + R++EA L + M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++V + TL+ LC +G++ +A+ +L+++L GL+ + I C
Sbjct: 178 --------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+ + L + IP++ Y+ + L+ +GR + + EM+ K +P +V
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289
Query: 333 MYE-----------------------------------AKLAALFKDGMVDEALEVIEEE 357
Y A + A K+G EA E + +E
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEA-EELYDE 348
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M+ + +P+ Y+ ++ G C N A ++ ++ GC + T+ L+ G CR
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQ-NRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R + ++L EM TY LI G C +G A L+EMIS P++ +
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467
Query: 478 SLVASVCCN 486
+L+ +C N
Sbjct: 468 TLLDGLCDN 476
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 202/483 (41%), Gaps = 63/483 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
+ +++ L +RI+E ++ QM CK +V F T + R G++ EAV+L
Sbjct: 153 TFNTLLHGLCVEDRISEALDLFHQM------CKPNVVTFTTLMNGLCREGRVVEAVALLD 206
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ T++ M K +A L + + + N ++D L +
Sbjct: 207 RMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKD 266
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R A ++F EM + +PD +Y+ ++ G C R ++A LL M ++ D
Sbjct: 267 GRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML----ERKINPD 322
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKIL-RKGLKAPKSRRHRID-LCPCNDGEDIEGAKS 282
+V + L+ A +GK +A ++ +++L R + + + ID C N ++ A+
Sbjct: 323 VVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR---LDAAEH 379
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +G P + +++ + R+ +G K+L EM G + + Y +
Sbjct: 380 MFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 439
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK------- 395
+ G ++ A ++++E M+ P V N LL GLCD G A+ K M K
Sbjct: 440 QVGDLNAAQDLLQE-MISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 498
Query: 396 --------------------------------------QVGCVANGETYGILVDGLCRDG 417
G V + TY ++DGLC+
Sbjct: 499 SRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA+++ + M +S+ P V T+N LI G C G + + EM + + D +
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618
Query: 478 SLV 480
+L+
Sbjct: 619 TLI 621
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 218/465 (46%), Gaps = 17/465 (3%)
Query: 24 PLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
P +L +F+ E +PN+ + ++ + + + M+G
Sbjct: 189 PQASLDVFRSLIELRLHPNHY----TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAV 244
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ T + + R G L EA +L + + ++NTL+ + + +A ++
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCND 199
+ YG+E +++ N+L LCQ + D A + EM+ G PD +Y+ L+
Sbjct: 305 TAYGFE--PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKW 362
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R ++A LL M KG +V + ++ +LC +GK+++A+ LEKI +GL
Sbjct: 363 RCSSDALRLLEEM----RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A +L++E + +G + + + +L R + +++L
Sbjct: 419 VITYNTLIDAYCKAG-NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+GF P V Y +AA FK+ + AL + ++M++ +P++ YN L+KGLC
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR-LWDQMIERKLIPSISTYNTLIKGLCR 536
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L + ++ G V + TY I++ C++G A R +M+ S+ P V
Sbjct: 537 MERLKEAIDKLNEFVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVV 595
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T N L+ GLC GK +A+ E + + K D+ +++L+ S+C
Sbjct: 596 TCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 204/439 (46%), Gaps = 11/439 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + E + ++ +MK D + T + +AR G + +A + +++
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +++N L + + K++ A L + + N L+D + R
Sbjct: 305 TAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRC 364
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S AL + +EM +G P +++I++K LC + +L EA +I+++G D++
Sbjct: 365 SSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA----LGKLEKIAEEGLAPDVI 420
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLI 284
Y TL+ A C G + A ++++++ KGLK + + +LC ED A+ L+
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED---AEELL 477
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ RG +P SY + + E ++ D+M + PS+ Y + L +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRM 537
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ EA++ + E + KG VP YNI++ C G+ A + KM + +
Sbjct: 538 ERLKEAIDKLNEFVEKG-LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN-SFKPDVV 595
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
T L++GLC G+ +A ++ E + + V TYN LI+ +C +G A+ + ++M
Sbjct: 596 TCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM 655
Query: 465 ISQAKLPDISVWSSLVASV 483
+ PD ++ +++++
Sbjct: 656 EVKGLQPDAFTYNVVLSAL 674
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 186/436 (42%), Gaps = 43/436 (9%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKE-SKLEAAHILFLRSCY 143
A+ YAR + A L +L + V + Q+ N +L + + S L A + RS
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + NLL+ C AL M G PD +Y+ L+ C L
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL R+ + G Y TL+ A G I+ A +++E + G +
Sbjct: 261 EARALL----ARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + + C G+ ++ A L +E G +P + +Y+ + + + ++L+EM
Sbjct: 317 NVLAMGLCQAGK-VDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEM 375
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
R KG P+LV + + +L K+G ++EAL +E+ +G P V YN L+ C AGN
Sbjct: 376 RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDAYCKAGN 434
Query: 383 SAVAVMYLKKM----------------------------------SKQVGCVANGETYGI 408
A A + +M Q G V + +YG
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++ ++ A R+ ++M+ R P + TYN LI+GLC + + EA+ L E + +
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554
Query: 469 KLPDISVWSSLVASVC 484
+PD + ++ ++ + C
Sbjct: 555 LVPDETTYNIIIHAYC 570
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 112/274 (40%), Gaps = 45/274 (16%)
Query: 20 KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
K+ +P AL+++ + E+ P+ Y ++I L R+ E + +++
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSIS----TYNTLIKGLCRMERLKEAIDKLNEFVEKGLV 556
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
++ + I Y + G L A + + + + NTL+ + KL+ A L
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616
Query: 138 FLRSCYGWEVKSR---IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
F W K + + + N L+ +C+ D ALH F +M+ +G PD +Y++++
Sbjct: 617 F----ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672
Query: 195 GLCNDRRLNEATHLLYSMF--------------------------------WRISQKGSG 222
L R EA ++L+ + S+K
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD 732
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ Y L LC G++++A +L+++++KG+
Sbjct: 733 NALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 15/252 (5%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S + T I+ R +L EA+ + V ++N ++ KE LE A F
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA-FRFHN 583
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
K + + N LM+ LC + D AL +F+ +G D +Y+ L++ +C
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI-----LRKG 255
++ A H F + KG D Y +L AL + G+ ++A +L K+ L +
Sbjct: 644 DVDTALHF----FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + D D ++ EG E+ + +L +Y L G++ E
Sbjct: 700 FACPLLKPSSADEA---DVKEHEGKPE--AESSEKAQDNALETYMERLNGLCTGGQLKEA 754
Query: 316 DKVLDEMRTKGF 327
VLDEM KG
Sbjct: 755 KAVLDEMMQKGM 766
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 219/467 (46%), Gaps = 15/467 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N ++++I L R++E E++D+M + T + +G+ EA+
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ C ++ +L M K + A L LR +K ++++D
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL-LRKMEERNIKLDAVKYSIIIDG 370
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A ++F EM+ +G + +Y+IL+ G CN R ++ LL M ++
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI----KRK 426
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V + L+ + +GK+++A ++ ++++ +G+ AP + + ID C N +
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENH---L 482
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A +++ + +G P++ +++ + RI +G ++ +M +G V Y
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E MV P + Y ILL GLCD G S A+ +K+ K
Sbjct: 543 IQGFCELGKLNVAKELFQE-MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + ++ P V+TYN++I GLC G EA
Sbjct: 602 MELDIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ +M PD ++ L+ + + D K +E+L C
Sbjct: 661 ELLFRKMEEDGHAPDGWTYNILIRAHLGD-GDATKSVKLIEELKRCG 706
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 195/433 (45%), Gaps = 59/433 (13%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++A+ LF+++ + F+ L + K + + L L C E+K + +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD----LVLALCKQMELKGIAHNLYT 223
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ LA ++ G P+ ++ L+ GLC + R++EA L+
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD--- 280
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G D++ TL+ LC GK +AM +++K++ G
Sbjct: 281 -RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 339
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R ++D C G ++ A +L NE ++G ++ +
Sbjct: 340 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS-LDNAFNLFNEMEMKGITTNIIT 398
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + N GR +G K+L +M + P++V + + + K+G + EA E + +EM
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA-EELHKEM 457
Query: 359 VKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ P Y L+ G C D N V +M K GC N T+ IL++G
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK------GCDPNIRTFNILINGY 511
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ R + + +M +R TYN LI+G C +GK A +EM+S+ P+I
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571
Query: 474 SVWSSLVASVCCN 486
+ L+ +C N
Sbjct: 572 VTYKILLDGLCDN 584
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 14/304 (4%)
Query: 31 FKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EA+E + H G P Y S+I + N + + +++D M C+ F
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y +A ++++ + LF+ +S V T ++NTL++ + KL A LF +
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF-QEMVSR 565
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V I + +L+D LC S+ AL +F++++ D Y+I++ G+CN ++++A
Sbjct: 566 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 625
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ +F + KG + Y ++ LC +G + +A + K+ G AP +
Sbjct: 626 ----WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HAPDGWTYN 680
Query: 266 IDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + DG+ + K + E L R G AS M ID+ ++ + K + ++
Sbjct: 681 ILIRAHLGDGDATKSVKLI--EELKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKS 738
Query: 325 KGFW 328
FW
Sbjct: 739 TSFW 742
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 192/450 (42%), Gaps = 43/450 (9%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C F T I + + G + EA LF L + +NTL+ VK +++ A
Sbjct: 331 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 390
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
++L+ I + N+L+ + R + + +++ G PDR + I +
Sbjct: 391 NMLYEEMRKKGIAPDGI-TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVS 449
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT------------------------ 230
GLC RL+EA L M +KG I+ + +
Sbjct: 450 GLCWAGRLDEAMEFLMDML----EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 505
Query: 231 -----------LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
LL L G++Q+A +++ +++ KGL + + L D+ G
Sbjct: 506 GLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSV-NNMAFTVLLDKFFKRGDVVG 564
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A+SL E RG P + ++SA L +G + E V EM KG P+ Y + +
Sbjct: 565 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 624
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G ++EAL+ +E+ M +P + N+++ GLC G A+ M Q G
Sbjct: 625 GFCKCGKLNEALK-LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM-HQTGL 682
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY L++G C+ + A ++ M P + TYN+ I G CS + AV+
Sbjct: 683 SPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVL 742
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCNTAD 489
L+E++S +P+ ++S++ VC + D
Sbjct: 743 MLDELVSAGIVPNTVTYNSMLNGVCSDILD 772
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 7/339 (2%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+S L+ LM AL + M G P IL K L R+ + +
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLL---RVGDYGN 249
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ + +F + ++G + ++ C +G I +L ++ K P + + I
Sbjct: 250 V-WKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLH-LMPKFHCEPNAFAYNIV 307
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+ C A + N + RG P++ +++ + EG +VE K+ D ++ GF
Sbjct: 308 INACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGF 367
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ +MY + K +D+A ++ EEM K P +NIL+ G G
Sbjct: 368 SPNAIMYNTLMNGYVKMREIDQA-NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
LK +S +G + + + I V GLC GR EA L +ML + P + +N +I
Sbjct: 427 RLLKDIS-VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA 485
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G + +A + M+ P S SSL+ + N
Sbjct: 486 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSIN 524
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 18/307 (5%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR--- 150
G+L EA L + + +F LL + K + A +S +G E++ R
Sbjct: 525 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA-----QSLWG-EMERRGIF 578
Query: 151 --IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + + +D L + + A +VF EM +G P+ +Y+ L+ G C +LNEA L
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M +G DI ++ LC QG+++ A+ + + + GL +P + +
Sbjct: 639 EKVM----RHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL-SPDIITYNTLI 693
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
D+ A +L+N G P L +Y+ + R+ +LDE+ + G
Sbjct: 694 NGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIV 753
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ V Y + L + D ++D A+ ++ ++K FVP V N+LL G +M
Sbjct: 754 PNTVTYNSMLNGVCSD-ILDRAM-ILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLM 811
Query: 389 YLKKMSK 395
+ K+S+
Sbjct: 812 WGHKLSE 818
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 196/454 (43%), Gaps = 50/454 (11%)
Query: 69 DQMKGDSCECKDSVFATAIRT-----------YARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+++ GD+C+ + I + G L EA SL + N +
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275
Query: 118 FNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
FNTL+ + KE K++AA I+ +++C +K + + N L+D + A +VF
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKAC----IKPDVVTYNSLIDGYFFLNKVKNAKYVF 331
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M G P+ +Y ++ GLC ++ ++EA S+F + K DIV Y +L+
Sbjct: 332 YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAM----SLFEEMKYKNMIPDIVTYTSLIDG 387
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC ++ A+ + +K+ +G++ P + I L G +E AK L++G
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQ-PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHL 446
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ M L E + +M KG P + ++ + ALF+ D+A +++
Sbjct: 447 NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506
Query: 355 EEE----------------------MVKGTFVPTVRVYNILLKG--LCDAGNSAVAVMYL 390
E M K P V Y L+ G L + A V Y
Sbjct: 507 REMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFY- 565
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
Q+G N + Y I++DGLC+ EA + EEM ++ +P + TY LI LC
Sbjct: 566 --SMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCK 623
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ L+EM PD+ ++ L+ +C
Sbjct: 624 NHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 199/434 (45%), Gaps = 20/434 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I N++ K V M + T I + ++EA+SLF+ +
Sbjct: 310 TYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM 369
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
N + ++ +L+ + K LE A I + ++ + S +L+D LC+ R
Sbjct: 370 KYKNMIPDIVTYTSLIDGLCKNHHLERA-IALCKKMKEQGIQPDVYSYTILLDALCKGGR 428
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A FQ + +G + + ++Y++++ GLC EA L M KG D +
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM----EGKGCMPDAI 484
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
++T++ AL ++ + A +IL +++ +GL+ ++R+ R+ ++ + +++ +
Sbjct: 485 TFKTIICALFEKDENDKAEKILREMIARGLQ--EARKVRL--------KEAKIVLAVMTK 534
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A I+ P + +Y + + + V M G P++ Y + L K
Sbjct: 535 ACIK---PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKT 591
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA+ + EE K F P + Y L+ LC + A+ LK+M K+ G + +Y
Sbjct: 592 VDEAMSLFEEMKHKNMF-PNIVTYTSLIDALCKNHHLERAIALLKEM-KEHGIQPDVYSY 649
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+DGLC+ GR A + + +L++ Y V+ Y +I LC G EA+ +M
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709
Query: 467 QAKLPDISVWSSLV 480
+ +PD + ++
Sbjct: 710 KGCMPDAVTFDIII 723
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 168/374 (44%), Gaps = 22/374 (5%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+ NTL+K + +++ A + F + S L++ LC+ + + ++
Sbjct: 135 TLNTLIKGLCFRGEIKKA-LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRK 193
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
++ PD Y+ ++ LC ++ L +A L M KG ++V Y L++ C
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIV----KGISPNVVTYNALVYGFC 249
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI--- 293
G +++A +L ++ K + D+C N D G + + A I +
Sbjct: 250 IMGHLKEAFSLLNEMKLKNINP--------DVCTFNTLIDALGKEGKMKAAKIVLAVMMK 301
Query: 294 ----PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P + +Y+++ + ++ V M G P++ Y + L K+ MVDE
Sbjct: 302 ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDE 361
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ + EE M +P + Y L+ GLC + A+ KKM +Q G + +Y IL
Sbjct: 362 AMSLFEE-MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ-GIQPDVYSYTIL 419
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+D LC+ GR A + +L++ Y V+TYNV+I GLC EA+ +M +
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479
Query: 470 LPDISVWSSLVASV 483
+PD + +++ ++
Sbjct: 480 MPDAITFKTIICAL 493
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 168/370 (45%), Gaps = 8/370 (2%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T FN +L +V LF + + +LN+LM+ C A V
Sbjct: 63 TFHFNYILSSLVNNKHYPTVISLF-KKFESNGATPDLCTLNILMNCFCHLTHITFAFSVL 121
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ +G +P+ + + L+KGLC + +A + ++ +G + V YRTL+
Sbjct: 122 ANILKRGYHPNAITLNTLIKGLCFRGEIKKALYF----HDQVVAQGFQLNQVSYRTLING 177
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC G+ + ++L K+ +K + I C + + + A L +E +++G P
Sbjct: 178 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKN-KLLGDACDLYSEMIVKGISP 236
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+A+ G + E +L+EM+ K P + + + AL K+G + +A +++
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM-KAAKIV 295
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
M+K P V YN L+ G A M+ Q G N TY ++DGLC
Sbjct: 296 LAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA-QSGVTPNVRTYTTMIDGLC 354
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++ EA + EEM ++ P + TY LI GLC A+ ++M Q PD+
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414
Query: 475 VWSSLVASVC 484
++ L+ ++C
Sbjct: 415 SYTILLDALC 424
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 12/350 (3%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N ++ L + + +F++ + G PD + +ILM C+ + A +S+
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFA----FSVL 121
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
I ++G + + TL+ LC +G+I+ A+ ++++ +G + + + C
Sbjct: 122 ANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKT 181
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
GE + L+ + P + Y+ + L + + + EM KG P++V
Sbjct: 182 GE-TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y A + G + EA ++ E +K P V +N L+ L G A + L M
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKN-INPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299
Query: 394 SKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
K C+ + TY L+DG + A V M P V TY +I GLC
Sbjct: 300 MK--ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK 357
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA---DLNVCRKTLEQ 499
EA+ EEM + +PDI ++SL+ +C N + +C+K EQ
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 20/322 (6%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N Y MI L +++ E ++ +M+G C F T I + ++A
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 503
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + + K +KE+K+ A + ++C +K + + LMD
Sbjct: 504 KILREM-------IARGLQEARKVRLKEAKIVLA--VMTKAC----IKPDVVTYGTLMDG 550
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
A +VF M G P+ + Y I++ GLC + ++EA S+F + K
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM----SLFEEMKHKN 606
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEG 279
+IV Y +L+ ALC ++ A+ +L+++ G++ P + I L C G +EG
Sbjct: 607 MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ-PDVYSYTILLDGLCKSGR-LEG 664
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK + L++G ++ Y+AM +L G E + +M KG P V ++ +
Sbjct: 665 AKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIW 724
Query: 340 ALFKDGMVDEALEVIEEEMVKG 361
ALF+ D+A +++ E + +G
Sbjct: 725 ALFEKDENDKAEKILXEMIARG 746
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
++EA+SLF+ + N ++ +L+ + K LE A I L+ ++ + S
Sbjct: 592 VDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA-IALLKEMKEHGIQPDVYSYT 650
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+D LC+ R + A +FQ + +G + + + Y ++ LC +EA L M
Sbjct: 651 ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM--- 707
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
KG D V + +++AL ++ + A +IL +++ +GL
Sbjct: 708 -EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 223/520 (42%), Gaps = 64/520 (12%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGD 74
K +S +K ++A + + + + P+ + ++G++ R+ + + +M+
Sbjct: 48 KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMR 107
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C F ++ + +L A+S F +++ +F+TLL + E ++ A
Sbjct: 108 RVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
LF + C K + + LM+ LC+ R A+ + M G P++ +Y ++
Sbjct: 168 LDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY----RT-LLFALCDQGKIQDAMQILE 249
G+C A +LL M K ++VI+ RT ++ C G+ +A Q+L+
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIK---PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279
Query: 250 KILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++L + +P + + +G+ E A+ L +E L RG IPS +YS+M
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFE-AEELYDEMLPRGIIPSTITYSSMIDGFCK 338
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE------------ 356
+ R+ + + M TKG P ++ + +A + VD+ ++++ E
Sbjct: 339 QNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398
Query: 357 ----------------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
EMV P V N LL GLCD G A+ K M
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458
Query: 395 KQV----------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
K G + +TY IL+ GL +G+FLEA + EEM R P TYN +
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I GLC + EA + M S++ P++ +++L+ C
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 35/416 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQF 109
MI S R +E ++++ +M D V A I + + G+ EA L+ +
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+ T ++++++ K+++L+AA H+ +L + G I + N L+ C+ +R D
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG--CSPDIITFNTLIAGYCRAKRVD 378
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+ + EM G + +Y L+ G C LN A LL M G ++V
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMV----SSGVCPNVVTC 434
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TLL LCD GK++DA+++ + + + + S P N E
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH-------PFNGVE------------- 474
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
P + +Y+ + L NEG+ +E +++ +EM +G P + Y + + L K +D
Sbjct: 475 -----PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA ++ + M +F P V + L+ G C AG + +M ++ G VAN TY
Sbjct: 530 EATQMFDS-MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYIT 587
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
L+ G + G A + +EM+ +P T ++ GL S + AV LE++
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 183/448 (40%), Gaps = 24/448 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N + +++ L R+ E ++D+M D + + T + + G A++
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235
Query: 102 LFKNLSQF-----NCVNWTQSFNT-LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L + + + N V W T ++ + A L ++ + + N
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L++ + + A ++ EM +G P +Y ++ G C RL+ A H MF+
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH----MFYL 351
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++ KG DI+ + TL+ C ++ D +++L ++ GL A + C G
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG- 410
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT----------- 324
D+ A+ L+ E + G P++ + + + L + G++ + ++ M+
Sbjct: 411 DLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPF 470
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P + Y ++ L +G EA E+ EE +G VP YN ++ GLC
Sbjct: 471 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYNSVIHGLCKQSRLD 529
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M + N T+ L++G C+ GR + + EM R TY L
Sbjct: 530 EATQMFDSMGSK-SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPD 472
I G +G A+ +EM++ PD
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYPD 616
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 41/184 (22%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F EA+E Y H G V Y S+I L + +R+ E ++ D M S F T
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 552
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y +AG++++ + LF + + V ++ TL+ +G+
Sbjct: 553 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--------------------HGF 592
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
I AL +FQEM G YPD + ++ GL + L A
Sbjct: 593 RKVGNING----------------ALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636
Query: 206 THLL 209
+L
Sbjct: 637 VAML 640
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 218/465 (46%), Gaps = 17/465 (3%)
Query: 24 PLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
P +L +F+ E +PN+ + ++ + + + M+G
Sbjct: 189 PQASLDVFRSLIELRLHPNHY----TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAV 244
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ T + + R G L EA +L + + ++NTL+ + + +A ++
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD-FQGCYPDRESYHILMKGLCND 199
+ YG+E +++ N+L LCQ + D A + EM+ PD +Y+ L+
Sbjct: 305 TAYGFE--PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKW 362
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R ++A LL M KG +V + ++ +LC +GK+++A+ LEKI +GL
Sbjct: 363 RCSSDALRLLEEM----RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A +L++E + +G + + + +L R + +++L
Sbjct: 419 VITYNTLIDAYCKAG-NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+GF P V Y +AA FK+ + AL + ++M++ +P++ YN L+KGLC
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR-LWDQMIERKLIPSISTYNTLIKGLCR 536
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L ++ ++ G V + TY I++ C++G A R +M+ S+ P V
Sbjct: 537 MERLKEAIDKLNELVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVV 595
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T N L+ GLC GK +A+ E + + K D+ +++L+ S+C
Sbjct: 596 TCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 204/439 (46%), Gaps = 11/439 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + E + ++ +MK D + T + +AR G + +A + +++
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +++N L + + K++ A L + + N L+D + R
Sbjct: 305 TAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRC 364
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S AL + +EM +G P +++I++K LC + +L EA +I+++G D++
Sbjct: 365 SSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA----LGKLEKIAEEGLAPDVI 420
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLI 284
Y TL+ A C G + A ++++++ KGLK + + +LC ED A+ L+
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED---AEELL 477
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ RG +P SY + + E ++ D+M + PS+ Y + L +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRM 537
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ EA++ + E + KG VP YNI++ C G+ A + KM + +
Sbjct: 538 ERLKEAIDKLNELVEKG-LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN-SFKPDVV 595
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
T L++GLC G+ +A ++ E + + V TYN LI+ +C +G A+ + ++M
Sbjct: 596 TCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM 655
Query: 465 ISQAKLPDISVWSSLVASV 483
+ PD ++ +++++
Sbjct: 656 EVKGLQPDAFTYNVVLSAL 674
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 183/435 (42%), Gaps = 41/435 (9%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKE-SKLEAAHILFLRSCY 143
A+ YAR + A L +L + V + Q+ N +L + + S L A + RS
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + NLL+ C AL M G PD +Y+ L+ C L
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL R+ + G Y TL+ A G I+ A +++E + G +
Sbjct: 261 EARALL----ARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + + C G+ E + + +P + +Y+ + + + ++L+EMR
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KG P+LV + + +L K+G ++EAL +E+ +G P V YN L+ C AGN
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDAYCKAGNV 435
Query: 384 AVAVMYLKKM----------------------------------SKQVGCVANGETYGIL 409
A A + +M Q G V + +YG +
Sbjct: 436 AKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ ++ A R+ ++M+ R P + TYN LI+GLC + + EA+ L E++ +
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555
Query: 470 LPDISVWSSLVASVC 484
+PD + ++ ++ + C
Sbjct: 556 VPDETTYNIIIHAYC 570
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 15/252 (5%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S + T I+ R +L EA+ L + V ++N ++ KE LE A F
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA-FRFHN 583
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
K + + N LM+ LC + D AL +F+ +G D +Y+ L++ +C
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI-----LRKG 255
++ A H F + KG D Y +L AL + G+ ++A +L K+ L +
Sbjct: 644 DVDTALHF----FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + D D ++ EG E+ + +L +Y L G++ E
Sbjct: 700 FACPLLKPSSADEA---DVKEHEGKPE--AESSEKAQDNALETYMERLNGLCTGGQLKEA 754
Query: 316 DKVLDEMRTKGF 327
VLDEM KG
Sbjct: 755 KAVLDEMMQKGM 766
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 45/274 (16%)
Query: 20 KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
K+ +P AL+++ + E+ P+ Y ++I L R+ E + ++++
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSIS----TYNTLIKGLCRMERLKEAIDKLNELVEKGLV 556
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
++ + I Y + G L A + + + + NTL+ + KL+ A L
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616
Query: 138 FLRSCYGWEVKSR---IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
F W K + + + N L+ +C+ D ALH F +M+ +G PD +Y++++
Sbjct: 617 F----ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672
Query: 195 GLCNDRRLNEATHLLYSMF--------------------------------WRISQKGSG 222
L R EA ++L+ + S+K
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD 732
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ Y L LC G++++A +L+++++KG+
Sbjct: 733 NALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 196/403 (48%), Gaps = 13/403 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR G L + + + + + ++NTL+ K+ K++ A L LR+
Sbjct: 214 IRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMAL-LRAMAVGG 272
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + S N +++ LC R + +EM +G PD +Y+ L+ G C + L++
Sbjct: 273 VAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGL 332
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR- 265
LL M KG ++V Y TL+ +C G + A++I +++ +GL+ P R +
Sbjct: 333 VLLSEMVG----KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLR-PNERTYTT 387
Query: 266 -IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
ID C G E K +++E ++ G PS+ +Y+A+ GR+ E +L M
Sbjct: 388 LIDGF-CQKGLMNEAYK-VLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P +V Y +A ++ + +A + ++EEMV+ +P Y+ L++GLC
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQ-MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A ++M ++ G + TY L++ C DG +A R+ +EM+ R + P TY+VL
Sbjct: 505 EAFDLFREMMRR-GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
I GL + A L ++ + +PD +++L+ + C N
Sbjct: 564 INGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNN 605
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 204/411 (49%), Gaps = 13/411 (3%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-----LEAAH 135
+VF +++ +R G + +A++L ++ S+N +L +++ S + A
Sbjct: 133 AVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAE 192
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+F R V + + N+++ + + L ++M+ +G P+ +Y+ L+
Sbjct: 193 RVF-RDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C +++ EA LL +M + G +++ Y +++ LC +G++ + +++E++ KG
Sbjct: 252 SCKKKKVKEAMALLRAM----AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
L + + + C +G +G L++E + +G P++ +Y+ + + G +
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGL-VLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRA 366
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++ D+MR +G P+ Y + + G+++EA +V+ E +V G F P+V YN L+
Sbjct: 367 VEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG-FSPSVVTYNALVH 425
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G AV L+ M ++ G + +Y ++ G CR+ +A ++ EEM+ +
Sbjct: 426 GYCFLGRVQEAVGILRGMVER-GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P TY+ LI+GLC K EA EM+ + PD ++SL+ + C +
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 184/393 (46%), Gaps = 8/393 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
R+ + ++A +F+++ + ++N +++ +V + LE + F+R +
Sbjct: 180 RSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKG-LGFMRKMEKEGI 238
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N L+D C+ ++ A+ + + M G + SY+ ++ GLC R++E
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M KG D V Y TL+ C +G + + +L +++ KGL +
Sbjct: 299 LVEEM----RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C C G ++ A + ++ +RG P+ +Y+ + +G + E KVL EM GF
Sbjct: 355 NCMCKAG-NLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
PS+V Y A + G V EA+ ++ MV+ P V Y+ ++ G C A
Sbjct: 414 SPSVVTYNALVHGYCFLGRVQEAVGILRG-MVERGLPPDVVSYSTVIAGFCRERELGKAF 472
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++M ++ G + + TY L+ GLC + +EA + EM+ R P TY LI
Sbjct: 473 QMKEEMVEK-GVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C G+ +A+ +EM+ + LPD +S L+
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 61/434 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I L R++E+ E++++M+G + + T + + + G L++ +
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGL------- 332
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
LL EMV G + + + L++ +C+
Sbjct: 333 ------------VLLSEMV-----------------GKGLSPNVVTYTTLINCMCKAGNL 363
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ +F +M +G P+ +Y L+ G C +NEA +L M G +V
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV----SGFSPSVVT 419
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C G++Q+A+ IL ++ +GL + C + E + A + E
Sbjct: 420 YNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERE-LGKAFQMKEEM 478
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ +G +P +YS++ L + ++VE + EM +G P V Y + + A DG +
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+AL + +EMV+ F+P Y++L+ GL + VA L K+ + V + TY
Sbjct: 539 SKALR-LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYE-ESVPDDVTYN 596
Query: 408 ILVD---------------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC--- 449
L++ G C G EA RV + ML R++ P YN++I G
Sbjct: 597 TLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGG 656
Query: 450 SIGKQYEAVMWLEE 463
++ K Y M LE
Sbjct: 657 NVHKAYNLYMELEH 670
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 207/455 (45%), Gaps = 12/455 (2%)
Query: 33 EAKEKYP--NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
E KEK + N Y ++I L + N ++ V+D+M G VF I Y
Sbjct: 299 ELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGY 358
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+ G + A+ + + N + + +L++ K ++E A L +
Sbjct: 359 CKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA-LEEILSSGLSIH 417
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ ++ LC+ R A + M + P +L+ GLC D + EAT L
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL-- 475
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
++R+ +KGS V L+ LC GK+ +A +I++++L +GL + + + L
Sbjct: 476 --WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
CN+G+ +EG L E RG P + +Y+ + L N G++ + K+ DE + G +
Sbjct: 534 CNEGK-VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + K +++ + E + K + ++ VYNI++K C GN A A+ L
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI-VYNIIIKAHCQNGNVAAALQLL 651
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ M K G + N TY L+ G+C G +A +++EM + P V Y LI G C
Sbjct: 652 ENM-KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
Query: 451 IGKQYEA-VMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ A WL EMIS P+ ++ ++ C
Sbjct: 711 LGQMDTAESTWL-EMISFNIHPNKFTYTVMIDGYC 744
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 193/468 (41%), Gaps = 79/468 (16%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + +A + + +F+ +S+ C + SF ++ + K K+E A LF++
Sbjct: 216 LSSLVKANEFEKCCEVFRVMSEGACPD-VFSFTNVINALCKGGKMENAIELFMKM-EKLG 273
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + N +++ LCQ R D A + ++M +G P+ ++Y L+ GL ++
Sbjct: 274 ISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVN 333
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG------KIQDAM--------------- 245
H+L M G ++V++ L+ C G KI+D M
Sbjct: 334 HVLDEMI----GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 389
Query: 246 --------------QILEKILRKGLK-------------APKSRRHRI----------DL 268
LE+IL GL K R H +
Sbjct: 390 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 449
Query: 269 CP------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P C DG+ +E A L L +G S + +A+ L G++ E
Sbjct: 450 RPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 508
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+++ EM +G + Y A + +G V+ + EEM K P + YN LL+G
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR-LREEMTKRGIQPDIYTYNFLLRG 567
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ G A+ + K G ++N TYGI+++G C+ R + + E+L +
Sbjct: 568 LCNVGKLDDAIKLWDEF-KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 626
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN++I+ C G A+ LE M S+ LP+ + +SSL+ VC
Sbjct: 627 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 20/362 (5%)
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K+ K A L+ R S++ S N L+ LC + A + +EM +G
Sbjct: 463 LCKDGKHLEATELWFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPM 521
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
DR +Y+ L+ G CN+ ++ L M +++G DI Y LL LC+ GK+ DA
Sbjct: 522 DRITYNALILGFCNEGKVEGCFRLREEM----TKRGIQPDIYTYNFLLRGLCNVGKLDDA 577
Query: 245 MQILEKILRKGLKAPKSRRHRIDL-----CPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++ ++ GL S H + C N ED+E +L NE L + + Y
Sbjct: 578 IKLWDEFKASGLI---SNIHTYGIMMEGYCKANRIEDVE---NLFNELLSKKMELNSIVY 631
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + G + ++L+ M++KG P+ Y + + + G+V++A +I+E M
Sbjct: 632 NIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE-MR 690
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K FVP V Y L+ G C G A +L+ +S + N TY +++DG C+ G
Sbjct: 691 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH--PNKFTYTVMIDGYCKLGN 748
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A+ +L +M P V TYNVL G C A ++M ++ D +++
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 808
Query: 479 LV 480
LV
Sbjct: 809 LV 810
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 188/424 (44%), Gaps = 50/424 (11%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQS 153
AV +F L++ ++ N LL +VK ++ E + C + V S + S
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFE-------KCCEVFRVMSEGACPDVFS 245
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+++ LC+ + + A+ +F +M+ G P+ +Y+ ++ GLC + RL+ A L M
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305
Query: 214 WRISQK-----------------------------GSG--EDIVIYRTLLFALCDQGKIQ 242
+ Q GSG ++V++ L+ C G I+
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE 365
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG-GIPSLASYSA 301
A++I + ++ K + + + C + IE A++ + E L G I YS
Sbjct: 366 GALKIKDVMISKNITPTSVTLYSLMQGFCKS-DQIEHAENALEEILSSGLSIHPDNCYSV 424
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L + R + M ++ F PS ++ + L KDG EA E+ + KG
Sbjct: 425 VHW-LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Query: 362 TFVPTVRVY-NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+ P +V N L+ GLC AG A +K+M ++ G + TY L+ G C +G+
Sbjct: 484 S--PASKVTSNALIHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVE 540
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
R+ EEM R P + TYN L+RGLC++GK +A+ +E + + +I + ++
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600
Query: 481 ASVC 484
C
Sbjct: 601 EGYC 604
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 190/410 (46%), Gaps = 9/410 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
+++ R+ ++KEV M + S + I + G +EA L +
Sbjct: 20 FAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRK 79
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+++T++ + K +++E A L + + +++ LC+ +R D AL
Sbjct: 80 AIAYSTIINWLCKLNRVEEARELIEK--MARYAPPDALTYGPIVERLCKTKRIDDALATV 137
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+EM +G PD Y+ ++ GLC + ++ EA L F ++ ++ ++V Y TL+
Sbjct: 138 EEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL----FEKMVKQRINPNVVTYNTLING 193
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +I+ A ++ +++ KG P + + +D+ AK + ++ + +P
Sbjct: 194 LCKAWRIETAYELFKEMAGKGY-VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVP 252
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+ + L G++ +VLD M KG P++ Y + K VDEA +++
Sbjct: 253 NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL 312
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+ + +G PTV YNILL LC A A + M+ Q C TY L+ LC
Sbjct: 313 EQMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMA-QRRCHPTVVTYNTLLRALC 370
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ A R+ EM+ + P TY+ L GL GK +EA +E+M
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 10/333 (3%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N + D + R + V+Q M G Y IL+ LC +EA LL++M
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 213 -FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
R +K + Y T++ LC ++++A +++EK+ R P + + +
Sbjct: 72 RLKRFKRKA-----IAYSTIINWLCKLNRVEEARELIEKMARYA--PPDALTYGPIVERL 124
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ I+ A + + E RG P Y+ + L E ++ E + ++M + P++
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + L K ++ A E+ +E KG +VPT YN L+ G C + A
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
KM + CV N TY L+DGL + G+ A+ VL+ M+ + P V TY+ LI G C +
Sbjct: 244 KMVRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA LE+M++Q P + ++ L+ S+C
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 335
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 17/372 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS----RIQSLNLLMDVLCQCRRSDLALH 172
+FNT+ K +LE ++ Y V++ R +L+ LC+ D A
Sbjct: 12 TFNTVADGFAKAGRLEQ-----VKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ M + +Y ++ LC R+ EA L+ M + + D + Y ++
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-----ARYAPPDALTYGPIV 121
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC +I DA+ +E++ +G+K P + + L E +E A+ L + + +
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIK-PDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++ +Y+ + L RI ++ EM KG+ P+ V Y + K + A +
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V ++ MV+ VP V Y L+ GL +G A L M K+ G N TY L+DG
Sbjct: 241 VFDK-MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCLIDG 298
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ R EA ++LE+M+ + P V TYN+L+ LC K +A M + P
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT 358
Query: 473 ISVWSSLVASVC 484
+ +++L+ ++C
Sbjct: 359 VVTYNTLLRALC 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 41/280 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ RI E+ +M G + + T I + + L A +F
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + NCV ++ TL+ + K K++AA + L V + + + L+D C+
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV-LDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A + ++M QG P +Y+IL+ LC +L +A + +F ++Q+
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA----FKLFRGMAQRRCHP 357
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y TLL ALC ++ A ++ +++ KG CP
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG-------------CP------------- 391
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
P +Y +A L G++ E +++++M+
Sbjct: 392 ----------PDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
TA ++FKE K Y Y ++I + + K+V D+M +C + T
Sbjct: 202 TAYELFKEMAGK--GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I +++G++ A + + + +++ L+ K +++ AH L L
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL-LEQMVTQ 318
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + N+L++ LC+ + + A +F+ M + C+P +Y+ L++ LC+ ++L+ A
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
H LY+ + KG D + Y TL + L GK+ +A +++EK+
Sbjct: 379 -HRLYA---EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+R IP A+++ +A GR+ + +V M G+ Y ++ L K G D
Sbjct: 3 LRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFD 62
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA +++ +K F Y+ ++ LC A ++KM++ + TYG
Sbjct: 63 EAYKLLHTMRLK-RFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP--PDALTYGP 119
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+V+ LC+ R +A +EEM R P YN ++ GLC K EA + E+M+ Q
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 469 KLPDISVWSSLVASVC 484
P++ +++L+ +C
Sbjct: 180 INPNVVTYNTLINGLC 195
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 190/404 (47%), Gaps = 9/404 (2%)
Query: 82 VFATAIRTYARAGQLNEAVS-LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
V + ++ A +++EA L +S+F C ++NT++ +E ++E A+ LFL
Sbjct: 127 VISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLE 186
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + + ++D LC+ + D A VFQ+M +G PD +Y+ L+ G +
Sbjct: 187 M-MDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG 245
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+ E +L M S G D + Y LL LC G+ ++A + + RKG+K P
Sbjct: 246 KWKEVVQMLEEM----STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIK-PD 300
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I L + S ++ + G P+ ++ M + I E + +
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+MR +G P +V + A + AL K G VD+A+ + +M+ P + V++ L+ GLC
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAV-LQFNQMINEGVTPNIFVFSSLVYGLCTV 419
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A ++ Q CV + + L+ LC +GR +EA R+++ M+ P V +
Sbjct: 420 GKWEKAEELFFEVLDQGICV-DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN L+ G C G+ EA L+ M+S P+ ++ L+ C
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 194/442 (43%), Gaps = 12/442 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ + K V QM + + + I Y G+ E V +
Sbjct: 195 NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQML 254
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +S ++ LL + K + A LF S + +K + +L+
Sbjct: 255 EEMSTHGLEPDCITYALLLDYLCKNGRCREAR-LFFDSMFRKGIKPDVAIYAILLHGYAT 313
Query: 164 CRRSDLALHVFQE-MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + +H F + M G P+R ++I+ + EA H+ F ++ Q+G
Sbjct: 314 -KGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI----FNKMRQQGLS 368
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+V + L+ ALC G++ DA+ +++ +G+ + C G+ E A+
Sbjct: 369 PDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK-WEKAEE 427
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E L +G ++ + +L NEGR++E +++D M G P+++ Y +A
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G +DEA ++++ MV P Y ILL+G C A A ++M + G
Sbjct: 488 LTGRIDEAAKLLDV-MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK-GVTPV 545
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC-VETYNVLIRGLCSIGKQYEAVMWL 461
TY ++ GL + GRF EA+ + M I S C + TYN+++ GLC EA
Sbjct: 546 VATYNTILHGLFQTGRFSEANELYLNM-INSRTKCDIYTYNIILNGLCKNNFVDEAFKMF 604
Query: 462 EEMISQAKLPDISVWSSLVASV 483
+ S+ D ++ ++ ++
Sbjct: 605 RRLCSKDPQLDSVTFNIMIGAL 626
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 187/435 (42%), Gaps = 8/435 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+YA ++ + ++EM +D M G+ +F YA+ + EA+ +F +
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q SF L+ + K +++ A +L V I + L+ LC +
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDA-VLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F E+ QG D ++ LM LCN+ R+ EA L+ M + G +++
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMI----RVGVRPNVI 477
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ C G+I +A ++L+ ++ GLK P + I L ++ A SL E
Sbjct: 478 SYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK-PNEFTYTILLRGYCKARRVDDAYSLFRE 536
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L++G P +A+Y+ + L+ GR E +++ M + Y L L K+
Sbjct: 537 MLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNF 596
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA ++ K + +V +NI++ L G A+ +S G V + TY
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSV-TFNIMIGALLKGGRKEDAMDLFATISAY-GLVPDVVTY 654
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ + L +G E + M P N L+R L G A ++L ++
Sbjct: 655 RLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDE 714
Query: 467 QAKLPDISVWSSLVA 481
+ + S S L++
Sbjct: 715 KNFSLEASTTSMLIS 729
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+ +YS + GR+ G + G+ ++++ L L VDEA ++
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ M + P V YN ++ G G A +M Q G N TY ++DGL
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ-GIPPNVVTYTTVIDGL 206
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ A V ++M+ R P TYN LI G S GK E V LEEM + PD
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 474 SVWSSLVASVCCN 486
++ L+ +C N
Sbjct: 267 ITYALLLDYLCKN 279
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 37/295 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ + RI E +++D M + + + + +R Y +A ++++A S
Sbjct: 473 RPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYS 532
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF+ + ++NT+L + + + A+ L+L + K I + N++++ L
Sbjct: 533 LFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL-NMINSRTKCDIYTYNIILNGL 591
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D A +F+ + + D +++I++ L R +A L F IS G
Sbjct: 592 CKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL----FATISAYGL 647
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+V YR + L ++G + + + + + G AP S H ++
Sbjct: 648 VPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG-TAPNS--HMLN-------------- 690
Query: 282 SLINEALIRGGIPSL---------------ASYSAMAIDLYNEGRIVEGDKVLDE 321
+L+ L RG I AS ++M I LY+ G K L E
Sbjct: 691 ALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPE 745
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 166/326 (50%), Gaps = 12/326 (3%)
Query: 164 CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CR + +LH+ + M +G PD L+KG R + +A ++ I +K
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-----EILEKFG 154
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D+ Y L+ C +I DA ++L+++ K +P + + I + C+ G+ ++ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGK-LDLA 212
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++N+ L P++ +Y+ + EG + E K++DEM ++G P + Y +
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K+GMVD A E++ +KG+ P V YNILL+ L + G + KM + C
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGS-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCD 330
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LCRDG+ EA +L+ M + P +Y+ LI C G+ A+ +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
LE MIS LPDI +++++A++C N
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKN 416
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 191/437 (43%), Gaps = 45/437 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + NRI + V+D+M+ + I + G+L+ A+ + L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
NC ++ L++ + E ++ A + + +K + + N ++ +C+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEA-LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + + ++ +G PD SY+IL++ L N + E L+ MF S+K ++V
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF---SEK-CDPNVVT 335
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC GKI++AM +L+ + KGL
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLT------------------------------ 365
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P SY + EGR+ + L+ M + G P +V Y LA L K+G
Sbjct: 366 ------PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETY 406
D+ALE+ + G P YN + L +G+ A+ M L+ MS G + TY
Sbjct: 420 DQALEIFGKLGEVGC-SPNSSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDEITY 476
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ LCR+G EA +L +M + P V TYN+++ G C + +A+ LE M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 467 QAKLPDISVWSSLVASV 483
P+ + ++ L+ +
Sbjct: 537 NGCRPNETTYTVLIEGI 553
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 7/319 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ L+ G C R+++AT +L R+ K D V Y ++ +LC +GK+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVL----DRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L ++L + P + I + ++ A L++E L RG P + +Y+ +
Sbjct: 212 ALKVLNQLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ EG + +++ + KG P ++ Y L AL G +E E + +M
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEG-EKLMTKMFSEKC 329
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+IL+ LC G A M L K+ K+ G + +Y L+ CR+GR A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA-MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LE M+ P + YN ++ LC GK +A+ ++ P+ S ++++ +++
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 484 CCNTADLNVCRKTLEQLSS 502
+ + LE +S+
Sbjct: 449 WSSGDKIRALHMILEMMSN 467
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 209/452 (46%), Gaps = 28/452 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+++++ L +R++E ++ QM C F T + R G++ EAV+L +
Sbjct: 149 TFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRM 204
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ T++ M K +A L + +K + + ++D L + R
Sbjct: 205 VEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGR 264
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A +++ EM +G +PD +Y+ ++ G C+ R +EA LL M ++ ++V
Sbjct: 265 HSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML----ERKINPNVV 320
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDIEGAKSL 283
Y L+ A + K +A ++ +++L +G+ P + + ID C N ++ A+ +
Sbjct: 321 TYSALINAYVKERKFFEAEELYDEMLPRGI-IPNTITYNSMIDGFCKQNR---LDAAEHM 376
Query: 284 INEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+G P + +++ + ID Y RI +G ++L EM G Y +
Sbjct: 377 FYVMATKGCSPDVFTFNTL-IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
G ++ AL+ + ++M+ P + N LL GLCD G A+ K M K
Sbjct: 436 LVGDLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 494
Query: 398 -----GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G + +TY IL+ GL +G+FLEA + +EM R P TY+ +I GLC
Sbjct: 495 SRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQS 554
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M S++ PD+ +++LV+ C
Sbjct: 555 RLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 185/431 (42%), Gaps = 56/431 (12%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L +A+ LF ++ + + FN L+ +V+ + + L+ + ++ + S N
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLY-QKMERKQIPCDVYSFN 116
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L+ C C + AL F ++ G PD ++ L+ GLC + R++EA L + M
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM--- 173
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++V + TL+ LC +G++ +A+ +L++++ GL+ + I C G+
Sbjct: 174 -----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228
Query: 276 DIEG-----------------------------------AKSLINEALIRGGIPSLASYS 300
+ A +L E +G P L +Y+
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M + GR E ++L EM + P++V Y A + A K+ EA E+ +E + +
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348
Query: 361 GTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
G +P YN ++ G C DA VM K GC + T+ L+DG C
Sbjct: 349 G-IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK------GCSPDVFTFNTLIDGYCG 401
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
R + + +L EM TYN LI G C +G A+ ++MIS PDI
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461
Query: 476 WSSLVASVCCN 486
++L+ +C N
Sbjct: 462 CNTLLDGLCDN 472
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 194/441 (43%), Gaps = 40/441 (9%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A ++ E +EK +P+ Y MI S R +E + ++ +M ++
Sbjct: 268 AHNLYTEMQEKGIFPDLF----TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCY 143
I Y + + EA L+ + + T ++N+++ K+++L+AA H+ ++ +
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + + N L+D C +R D + EM G D +Y+ L+ G C LN
Sbjct: 384 G--CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L M G DIV TLL LCD GK++DA+++ + + + + SR
Sbjct: 442 AALDLSQQMI----SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR- 496
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
P N E P + +Y+ + L NEG+ +E +++ EM
Sbjct: 497 ------PFNGVE------------------PDVQTYNILISGLINEGKFLEAEELYKEMP 532
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ + Y + + L K +DEA ++ + M +F P V +N L+ G C AG
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDS-MGSKSFSPDVVTFNTLVSGYCKAGRV 591
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +M ++ G VA+ TY L+ G + G A + +EM+ +P T
Sbjct: 592 DDGLELFCEMGRR-GIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRS 650
Query: 444 LIRGLCSIGKQYEAVMWLEEM 464
++ L S + AV LE++
Sbjct: 651 MLTVLWSKEELKRAVAMLEDL 671
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 23/393 (5%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW-EVKSRIQSL 154
L+EA++LF+ L N S N LLK ++ +L+ A C + E+ S +
Sbjct: 240 LDEAIALFRELPDKNVC----SHNILLKALLSAGRLKDA-------CQHFDEMSSPPDVV 288
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
V C R +L A+ + EM +G + Y ++ LCN ++++A +L M
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D V++ T++ C +G + A ++ E++ ++GL A + + C
Sbjct: 349 ----TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSL 331
GE ++ A ++ E + +G + +Y+ + ID Y G +VE +V +EM + P++
Sbjct: 405 AGE-LKEADRVLQEMVDKGLDVDVVTYTVL-IDGYCKRGNMVEAFRVHNEMVGRRVAPNV 462
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y A L K G V A E++ E KG + V YN L+ GLC GN A+ +
Sbjct: 463 VTYTALSDGLCKQGDVRAANELLHEMCNKGLEL-NVYTYNSLINGLCKFGNLEQAMRIMT 521
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G + TY L+D LC+ G F A +L+EML + P + TYNVL+ G C
Sbjct: 522 EM-EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMS 580
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ LE M+ + P++ ++SL+ C
Sbjct: 581 GRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 180/434 (41%), Gaps = 43/434 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +M+ + +++D+M E +V+ + I GQ+++A+ + +++
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ F T++ + L AA RR
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAA------------------------------RR 378
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+F+EM +G DR ++ L+ GLC L EA +L M KG D+V
Sbjct: 379 ------LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV----DKGLDVDVV 428
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +G + +A ++ +++ + + + C G D+ A L++E
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG-DVRAANELLHE 487
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G ++ +Y+++ L G + + +++ EM G + Y + L K G
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
D A +++E + KG P++ YN+L+ G C +G L+ M ++ N TY
Sbjct: 548 FDRAHNMLQEMLDKG-IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK-NVRPNVVTY 605
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C D + + + M + P TYN+LI+G C EA+ + +EMI
Sbjct: 606 NSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIE 665
Query: 467 QAKLPDISVWSSLV 480
+ S +S+L+
Sbjct: 666 KGLRLTASSYSALI 679
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 132/353 (37%), Gaps = 45/353 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + E V+ +M + + I Y + G + EA + +
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLCQCR 165
++ L + K+ + AA+ L C G E+ + + N L++ LC+
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN--VYTYNSLINGLCKFG 511
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ + EM+ G D +Y L+ LC + A ++L M KG I
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEML----DKGIKPSI 567
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLK---------------------------- 257
Y L+ C G+++ ++LE +L K ++
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627
Query: 258 ------APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
AP + I + +++ A E + +G + +SYSA+ L + +
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKK 687
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEEEMVK 360
E D+MR +G +Y + F + ++ + E++E VK
Sbjct: 688 FSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASHVK 740
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 194/455 (42%), Gaps = 25/455 (5%)
Query: 46 PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
P++A + +L S+ M + + + S FA + ++ AG+ +AV F
Sbjct: 101 PLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAF 160
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +F +NT+LK +V + A L+ R +R + N+LMD LC+
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNR-ATYNVLMDGLCK 219
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ AL +F EM +G P+ + Y +L+ LCN +++EA LL SM KG
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM----KDKGCLP 275
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V Y L LC G++ +A Q L +L+ G A + + + +
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
L R P + Y+ M GRI + LD M+ KGF P Y L L
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G ++ A + EM++ V I++ GLC G A+ +M + GC
Sbjct: 395 HGDLERA-HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEH-GCDPTV 452
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV--------------ETYNVLIRGLC 449
TY L+DG R+GR LE +R+L + P + E+ L+ +C
Sbjct: 453 MTYNALIDGFYREGR-LEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC 511
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A L +I +PD+ +++L+ +C
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 196/444 (44%), Gaps = 26/444 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L + + ++ D+M ++ + + AG+++EAV L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++ C+ ++N L + K ++ EA L + G+ + ++ + L+D L
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG--LKGYSCLIDGLF 323
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q RR D ++ M + PD Y I+++G R+ +A L M +KG
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM----KKKGFV 379
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D Y T+L LCD G ++ A + ++L+ L S I +C ++ A
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL-VLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY-------- 334
+ +E G P++ +Y+A+ Y EGR+ E + +M G PSL +
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTLGANQV 497
Query: 335 --EAKLAALFKD----GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
L L D G V +A +++ + G VP V YN L+ GLC A N AV
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV-VPDVVTYNTLINGLCKARNLDGAVR 556
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
K++ + G + TYG L+DGL R R +A + + +L P + YN ++R L
Sbjct: 557 LFKELQLK-GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615
Query: 449 CSIGKQYEAV-MWLEEMISQAKLP 471
C + K +A+ +WL+ + + P
Sbjct: 616 CRMKKLSQAINLWLDYLPKKYNFP 639
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 38/179 (21%)
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
Q+KG S + + + T I RA + N+A+ LF+N+ Q +N++++ + +
Sbjct: 562 QLKGISPD--EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619
Query: 130 KLEAAHIL---FLRSCYGWEVKSRI--------------------------------QSL 154
KL A L +L Y + V+S +
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPY 679
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH-LLYSM 212
+ + LCQ RR+D AL +F + G +L+ LC DR LN A +LY++
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYAL 738
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 16/398 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+++ T+ +++AVSLF L + N FN +L +VK +L+L
Sbjct: 55 YSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHT--VLYLSKK 112
Query: 143 YGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ +K + + N+L++ CQ A VF ++ G P+ ++ L+KGLC +
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172
Query: 202 LNEATHL---LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+++A + L ++ ++ +Q + Y TL+ LC G+ + A+ +L ++ K ++
Sbjct: 173 IHQALNFHDKLVALGFQFNQ-------ISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
I C D + + A L +E + +G P++ +YSA+ + G++ + +
Sbjct: 226 NVVMYSTIIDGMCKD-KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
++M ++ P + + + K G + AL++++E +G P + Y+ +L LC
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQ-PPNIVTYSSILDALC 343
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
AV L K+ Q G N TY IL+DGLC G+ +A + E++L++ Y V
Sbjct: 344 KTHRVDKAVALLTKLKDQ-GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITV 402
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
TY V+ G C G EA L +M +PD +
Sbjct: 403 VTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 152/347 (43%), Gaps = 43/347 (12%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N ++ L + + L++ ++M+F+G P+ + +IL+ C + A +S+F
Sbjct: 90 FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFA----FSVF 145
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+I + G + + + TL+ LC +G+I A+ +K++ G + + + C
Sbjct: 146 AKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKV 205
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
GE + A+DL R V+G V P++VM
Sbjct: 206 GE------------------------TRAALDLL---RRVDGKLV---------QPNVVM 229
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + + KD V++A ++ E + KG P V Y+ L+ G G AV KM
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGI-SPNVVTYSALISGFFTVGKLKDAVDLFNKM 288
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ + T+ ILVD C+ G+ A ++++EM R P + TY+ ++ LC +
Sbjct: 289 ISE-NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+AV L ++ Q P++ ++ L+ + C + L R E L
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGL-CTSGKLEDARNIFEDL 393
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 135/313 (43%), Gaps = 4/313 (1%)
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
SY+++ ++ L + F I S +++ Y + + DA+ +
Sbjct: 15 SYYVVPVSHFVPKKFPSFQFLKNTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSL 74
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+LR+ P ++I L + L + RG P+L + + +
Sbjct: 75 FNCLLRQNPTPPAIEFNKI-LGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFC 133
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G I V ++ G+ P+ + + + L G + +AL +++V F
Sbjct: 134 QLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALN-FHDKLVALGFQFNQ 192
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y L+ GLC G + A+ L+++ ++ N Y ++DG+C+D +A +
Sbjct: 193 ISYGTLIDGLCKVGETRAALDLLRRVDGKL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYS 251
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
EM+ + P V TY+ LI G ++GK +AV +MIS+ PD+ ++ LV V C +
Sbjct: 252 EMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV-DVFCKS 310
Query: 488 ADLNVCRKTLEQL 500
++ K ++++
Sbjct: 311 GKISYALKLVDEM 323
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
F T I+ GQ+++A++ L QFN + S+ TL+ + K + AA L
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQI----SYGTLIDGLCKVGETRAALDL- 214
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
LR G V+ + + ++D +C+ + + A ++ EM +G P+ +Y L+ G
Sbjct: 215 LRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274
Query: 199 DRRLNEATHLLYSMF---------------------WRIS----------QKGSGEDIVI 227
+L +A L M +IS +G +IV
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
Y ++L ALC ++ A+ +L K+ +G++ P + I + C G+ +E A+++ +
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIR-PNMHTYTILIDGLCTSGK-LEDARNIFED 392
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L++G ++ +Y M +G E +L +M G P YE +LFK G
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE 452
Query: 347 VDEA 350
D A
Sbjct: 453 NDMA 456
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 7/276 (2%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+F + ++ + + +L +L + + +K+ +G+K + + C
Sbjct: 73 SLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCF 132
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G I A S+ + L G P+ +++ + L +G+I + D++ GF +
Sbjct: 133 CQLGL-IPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFN 191
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLC-DAGNSAVAVM 388
+ Y + L K G AL+++ V G V P V +Y+ ++ G+C D + +
Sbjct: 192 QISYGTLIDGLCKVGETRAALDLLRR--VDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDL 249
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
Y + +SK G N TY L+ G G+ +A + +M+ + P V T+N+L+
Sbjct: 250 YSEMVSK--GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C GK A+ ++EM + + P+I +SS++ ++C
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 343
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 216/511 (42%), Gaps = 55/511 (10%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
++SQ+I QKS AL+ F+ A PN+ H+ Y ++I L R +K+++D+M
Sbjct: 38 HVSQLILDQKSASEALEYFRWAS-TVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMP 96
Query: 73 GD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
D +F T IR RA + + + +F+ + FN++L +VKE +
Sbjct: 97 HSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKED-I 155
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+ A + +S V+ + +LM LC R + Q + +G P+ Y+
Sbjct: 156 DMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNT 215
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ LC + ++ A +L+ M + V + L+ C +G A+ +LEK
Sbjct: 216 LLHALCRNGKVGRARNLMNEM--------EDPNDVTFNILISGYCKEGNSVQALVLLEKS 267
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
G ++ CN G +E A+ ++ GG+ + +Y+ + G+
Sbjct: 268 FSMGFVPDVVSVTKVLEILCNAGRTMEAAE-VLERVESMGGLLDVVAYNTLIKGFCGAGK 326
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE---EMVKGTFVPTVR 368
+ G L +M KG P++ Y ++ + GM+D AL++ + + +K FV
Sbjct: 327 VKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFV---- 382
Query: 369 VYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGL------------- 413
++ L++GLC +++ L + SK+ G + Y ++ GL
Sbjct: 383 TFDTLIRGLCSEERIEDGFSILELMEESKE-GSRGHISPYNSIIYGLLKKNGFDESAEFL 441
Query: 414 --------------------CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
C+ G +A RV ++M+ P + YN L+ G G
Sbjct: 442 TKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGN 501
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EAV + EMI+ P S +++++ C
Sbjct: 502 VREAVELMNEMIANNCFPIPSTFNAVITGFC 532
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 190/428 (44%), Gaps = 16/428 (3%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+NRI E +++ +K V+ T + R G++ A +L + N V +
Sbjct: 188 TNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDPNDV----T 243
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
FN L+ KE A +L +S + + S+ ++++LC R+ A V + +
Sbjct: 244 FNILISGYCKEGNSVQALVLLEKS-FSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERV 302
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+ G D +Y+ L+KG C ++ H L M KG ++ Y L+ +
Sbjct: 303 ESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQM----ENKGCLPNVDTYNVLISGFSE 358
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN--EALIRGGIPS 295
G + A+ + + G+K + C++ E IE S++ E G
Sbjct: 359 SGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSE-ERIEDGFSILELMEESKEGSRGH 417
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
++ Y+++ L + E + L +M +P V + K G +++A V +
Sbjct: 418 ISPYNSIIYGLLKKNGFDESAEFLTKM--GNLFPRAVDRSLMILEHCKKGAIEDAKRVYD 475
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ + +G +P++ VYN L+ G GN AV + +M C T+ ++ G CR
Sbjct: 476 QMIDEGG-IPSILVYNCLVHGFSKQGNVREAVELMNEMIAN-NCFPIPSTFNAVITGFCR 533
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G+ A +++E++ R P ETY+ LI LC G +A+ +M+ + LPD+ +
Sbjct: 534 QGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFI 593
Query: 476 WSSLVASV 483
W+SL+ S+
Sbjct: 594 WNSLLLSL 601
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 33/319 (10%)
Query: 54 ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
IL + R E EV+++++ + T I+ + AG++ + K + C+
Sbjct: 285 ILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLP 344
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
++N L+ + L+ A LF +K + + L+ LC R + +
Sbjct: 345 NVDTYNVLISGFSESGMLDLALDLF-NDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSI 403
Query: 174 FQEMD--FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---FWRIS----------Q 218
+ M+ +G Y+ ++ GL +E+ L M F R +
Sbjct: 404 LELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCK 463
Query: 219 KGSGED----------------IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
KG+ ED I++Y L+ QG +++A++++ +++ S
Sbjct: 464 KGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPST 523
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C G+ +E A L+ + RG +P+ +YS + L G + + +V +M
Sbjct: 524 FNAVITGFCRQGK-VESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQM 582
Query: 323 RTKGFWPSLVMYEAKLAAL 341
KG P L ++ + L +L
Sbjct: 583 VDKGILPDLFIWNSLLLSL 601
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
I + K V DQM + V+ + +++ G + EAV L + NC +FN
Sbjct: 467 IEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNA 526
Query: 121 LLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVF 174
++ ++ K+E+A L R C ++ + L+DVLC R DL A+ VF
Sbjct: 527 VITGFCRQGKVESALKLVEDITARGCV-----PNTETYSPLIDVLC--RNGDLQKAMQVF 579
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+M +G PD ++ L+ L +R ++
Sbjct: 580 MQMVDKGILPDLFIWNSLLLSLSQERHFSK 609
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 44/457 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F I + +A L+ A L + + + CV +F L+ + K +++ A L +
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + + +++ LC+ + D A +FQ M+ + C P+ +++IL+ GLC +R
Sbjct: 294 VMGG-CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ EA L + R+ + G DI+ Y +L+ LC ++ +A Q+ + I G+ A +
Sbjct: 353 IEEARQL----YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 408
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + A + + + +G P LA+Y+++ ++ R VE ++++E
Sbjct: 409 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEE 468
Query: 322 MRTKGFWPSLVMYEAKLAALFK------------------------------DGMV---- 347
M +KGF P + A L LF+ +GM
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Query: 348 -DEALEVIEEEMVKG--TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D+AL V+E+ + K F P+ + L++ LC G + A L KMS++ G A
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER-GFAAAVS 587
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y L+ GL R R+ EA++V E M+ P + T NV+I LCS K +A ++ M
Sbjct: 588 SYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 647
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
PDI ++L+ C + ++ RK LE+++
Sbjct: 648 SKLGCCPDIETCNTLIGGY-CKSGRADLARKLLEEMT 683
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 179/411 (43%), Gaps = 52/411 (12%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
SC C A+ R + EA++LF+N C+ ++ L++ L+ A
Sbjct: 24 SCNC-------ALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIA 76
Query: 135 -HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+L G+E + + + LM LC R AL F+ M + C PD +Y L+
Sbjct: 77 IQLLEEMKSSGFEGNAVVHTT--LMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALV 133
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
LC + +EA +L M +G D V + TL+ LC G + A ++LE +++
Sbjct: 134 HALCKAGKFDEAQGMLREMV----AQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+G+ + I CN +E LAS
Sbjct: 190 RGMGNSDAAFETIIQRLCNKYNSVE-----------------LAS--------------- 217
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
KVL + KGF P+++M+ + K +D A +++E + KG VP V + IL
Sbjct: 218 ---KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC-VPNVFTFTIL 273
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ GLC A A L+KM GC N TY +++GLC+ G+ +A + + M R+
Sbjct: 274 ITGLCKANRVGEAQQLLEKMVMG-GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V T+N+LI GLC + EA M PDI ++SL+ +C
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 383
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 191/467 (40%), Gaps = 42/467 (8%)
Query: 52 IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+ +L NR E + C + IR ++ AG L+ A+ L + +
Sbjct: 29 LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
TL+K + ++ A F + + + L+ LC+ + D A
Sbjct: 89 EGNAVVHTTLMKGLCDAGRVVEALEHF--RAMAKDCAPDVMTYTALVHALCKAGKFDEAQ 146
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ +EM QGC PD ++ L+ GLC +A +L + Q+G G + T+
Sbjct: 147 GMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI----QRGMGNSDAAFETI 202
Query: 232 LFALCDQ-GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
+ LC++ ++ A ++L ++ KG P + + +D++ A L+ + +
Sbjct: 203 IQRLCNKYNSVELASKVLGVVIAKGF-TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 261
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G +P++ +++ + L R+ E ++L++M G P++V Y + L K G VD+A
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321
Query: 351 LEV----------------------------IEE------EMVKGTFVPTVRVYNILLKG 376
E+ IEE M + P + YN L+ G
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + A + + + AN TY L G GR +A R+ ++ + + P
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ TY LI C + E V +EEM S+ P ++ S+++ +
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 488
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 205/490 (41%), Gaps = 58/490 (11%)
Query: 1 MSVRWPRLLTPTYL--SQIIK---KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIG 53
+ V + TPT L + +I K K +A K+ + EK PN + +I
Sbjct: 220 LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF----TFTILIT 275
Query: 54 ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
L ++NR+ E ++++++M C ++T I + GQ+++A LF+ + + NC
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+ N L+ + K ++E A L+ R I + N L+D LC+ + D A +
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRM-RETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394
Query: 174 FQEMDFQGC-YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
FQ + G + +Y L G R+ +A + F + KG D+ Y +L+
Sbjct: 395 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI----FSMLVDKGFSPDLATYTSLI 450
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
C + + ++++E++ KG P+ L +G E A L + RG
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFP-PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 509
Query: 293 I--------------------------------------PSLASYSAMAIDLYNEGRIVE 314
PS ++ A+ L G+ +
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++L +M +GF ++ Y L+ L + DEA +V E MV P + N+++
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA-MVSAGPAPEISTVNVVI 628
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
LC A A +++MSK +GC + ET L+ G C+ GR A ++LEEM
Sbjct: 629 SWLCSAAKVDDAYELVQRMSK-LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687
Query: 435 WPCVETYNVL 444
P T+++L
Sbjct: 688 EPNDTTHDLL 697
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-- 106
++++G L E N ++ D M C ++ + ARA + ++A+++ + +
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVID 541
Query: 107 ---SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+FN + + + L++ + + K +A +L S G+ + + S N L+ L
Sbjct: 542 KRDRKFN--PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGF--AAAVSSYNRLLSGLS 597
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +R D A VF+ M G P+ + ++++ LC+ ++++A Y + R+S+ G
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA----YELVQRMSKLGCC 653
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
DI TL+ C G+ A ++LE++ GL+ P H DL C
Sbjct: 654 PDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE-PNDTTH--DLLEC 699
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 194/434 (44%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI L + + + + QMK + + I + + G L+E + +F+ +
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C ++N L+ K ++ A FL +K + + + +D C+
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKA-FEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ F +M P+ +Y L+ C L EA L+ I Q G ++V
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE----EILQAGIKLNVV 431
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y LL LC++G++++A ++ +L G+ AP + + +++E AK ++ E
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGV-APNQETYTALVHGFIKAKEMEYAKDILKE 490
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P L Y + L NE R+ E ++ E++ G + V+Y + A FK G
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
EAL ++EE M+ + T Y L+ GLC +G A+ + +MS ++G N Y
Sbjct: 551 ATEALTLLEE-MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS-EIGLQPNVAVY 608
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LVDGLC++ F A ++ +EML + P Y LI G G EA+ + MI
Sbjct: 609 TALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 668
Query: 467 QAKLPDISVWSSLV 480
D+ +++L+
Sbjct: 669 IGMELDLHAYTALI 682
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 9/454 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ ++ L E + E E +M+ K + ++ G+ + + FK++
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N ++ + KE LE A LF + I + N L+D +
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGL 305
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D + +F++M C PD +Y+ L+ C R+ +A L+ M G ++V
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM----KANGLKPNVV 361
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T + A C +G +Q+A++ + R L + + C G E K L+ E
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK-LVEE 420
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G ++ +Y+A+ L EGR+ E ++V M G P+ Y A + K
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A ++++E M + P + +Y +L GLC+ A + + ++ K+ G N Y
Sbjct: 481 MEYAKDILKE-MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIY 538
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+D + G+ EA +LEEML TY LI GLC G EA+ M
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P+++V+++LV +C N V +K +++
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNC-FEVAKKLFDEM 631
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 190/428 (44%), Gaps = 8/428 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + R+ + E + +MK + + ++T I + + G L EA+ F ++
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ +L+ K L A + + +K + + L+D LC+ R
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEA-LKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF+ M G P++E+Y L+ G + + A +L M +K D++
Sbjct: 446 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM----KEKCIKPDLL 501
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y T+L+ LC++ ++++A ++ +I G+ + G+ E A +L+ E
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE-ALTLLEE 560
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G I + +Y A+ L G + E M G P++ +Y A + L K+
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A ++ +E + KG +P Y L+ G GN A+ +M ++G + Y
Sbjct: 621 FEVAKKLFDEMLDKG-MMPDKIAYTALIDGNMKHGNLQEALNLRDRMI-EIGMELDLHAY 678
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GL G+ +A +L+EM+ + P Y LI+ ++GK EA+ EM
Sbjct: 679 TALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 738
Query: 467 QAKLPDIS 474
+ + +S
Sbjct: 739 RGMITGLS 746
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 29/365 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P T T L K + ALK+ +E + + N Y +++ L E R+ E +
Sbjct: 393 PNEFTYTSLIDANCKAGNLAEALKLVEEILQ--AGIKLNVVTYTALLDGLCEEGRMKEAE 450
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS-FNTLLKE 124
EV M + + + +A ++ A + K + + C+ + T+L
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE-KCIKPDLLLYGTILWG 509
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLMDVLCQCRRSDLALHVFQEMDF 179
+ ES+LE A +L E+K + N LMD + ++ AL + +EM
Sbjct: 510 LCNESRLEEAKLLI------GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G +Y L+ GLC + EA H F R+S+ G ++ +Y L+ LC
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMH----HFGRMSEIGLQPNVAVYTALVDGLCKNN 619
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE----DIEGAKSLINEALIRGGIPS 295
+ A ++ +++L KG+ K I DG +++ A +L + + G
Sbjct: 620 CFEVAKKLFDEMLDKGMMPDK-----IAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 674
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
L +Y+A+ L + G++ + +LDEM KG P V+Y + + G VDEALE ++
Sbjct: 675 LHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE-LQ 733
Query: 356 EEMVK 360
EM K
Sbjct: 734 NEMAK 738
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P +++A +AL + GM++EA E +M K P R N LL L G ++
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECF-LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ K M G + TY I++D LC++G A + +M + P + TYN LI G
Sbjct: 242 FFKDMG-AAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G E + E+M PD+ +++L+ C
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFC 336
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 196/454 (43%), Gaps = 26/454 (5%)
Query: 47 VYASMIGIL--SESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFK 104
+Y+ + +L SE + + M + + + + F + ++ AG+ EAV F
Sbjct: 110 LYSRAVSVLLASEPDAVA-MFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFS 168
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ F+C +N + + +V + A L+ R + + + +LMD LC+
Sbjct: 169 RMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYI-VLMDGLCKR 227
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ AL +F EM +G PD + Y +L+ LCN+ R+ +A LL SM + G D
Sbjct: 228 GMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM----KENGCPPD 283
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y L LC G++ +A E + G + G EG S
Sbjct: 284 EVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGL-SYY 342
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E L + P + Y+ + GR + +LDEM+ KGF P Y L ALF
Sbjct: 343 TEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDV 402
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +D A + + EM++ V +NI++ GLC G A+ +M + GC
Sbjct: 403 GNIDRA-QSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEH-GCHPTVM 460
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV--------------ETYNVLIRGLCS 450
TY L+DGL R G LE +R+L + P + E+ L+ G+C
Sbjct: 461 TYNALIDGLYRAG-MLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQ 519
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A L +I +PD+ +++L+ +C
Sbjct: 520 SGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLC 553
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 199/481 (41%), Gaps = 63/481 (13%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R VY ++ +L + I + ++M C + + + + G +A+
Sbjct: 176 RPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALK 235
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLL 157
+F + + V + + LL + E ++E A L C EV + +
Sbjct: 236 MFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEV-----TYTVF 290
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ LC+ R D A H F+ + G Y L+ GL R +E S + +
Sbjct: 291 LSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGL----SYYTEML 346
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
K DI +Y L+ + G+ +DA +L+++ KG P + + L D +I
Sbjct: 347 GKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGF-VPDTFCYNTLLKALFDVGNI 405
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A+SL++E L + +++ M L +G I + +V DEM G P+++ Y A
Sbjct: 406 DRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNAL 465
Query: 338 LAALFKDGMVDEALEVIEE-EM-------------------------------------- 358
+ L++ GM++EA + + EM
Sbjct: 466 IDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLK 525
Query: 359 --------VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ VP V YN L+ GLC A N A+ K++ + G + TYG L+
Sbjct: 526 AYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLK-GISPDEITYGTLI 584
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV-MWLEEMISQAK 469
DGL R R +A+ + + +L +P + YN ++R LC + K +A+ +WL+ + +
Sbjct: 585 DGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYN 644
Query: 470 L 470
L
Sbjct: 645 L 645
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 188/458 (41%), Gaps = 55/458 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L ++ R E +M G S +++ IR +A AG+ +A L +
Sbjct: 322 YSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMK 381
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V T +NTLLK + ++ A L + V + N+++ LC+
Sbjct: 382 DKGFVPDTFCYNTLLKALFDVGNIDRAQSL-MSEMLQNNVVLDSTTHNIMICGLCKKGLI 440
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY--------SMFWRISQK 219
D A+ VF EM GC+P +Y+ L+ GL L EA L + S+F R++
Sbjct: 441 DKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLG 500
Query: 220 GSG-EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+ D R L+ +C G++ A ++L I+ G+ P + + ++++
Sbjct: 501 ANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGV-VPDVVTYNTLINGLCKAKNLD 559
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
GA L E ++G P +Y + L+ R + + + G +PSL +Y +
Sbjct: 560 GALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMM 619
Query: 339 AAL------------------------------------FKDGMVDEAL-EVIEEEMVKG 361
+L F+DG +DE + E+I+ + V G
Sbjct: 620 RSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYG 679
Query: 362 TFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ P Y I + GLC + A+ + ++ + + G V +L++ LC D
Sbjct: 680 SLNPNP--YTIWVIGLCQVRKIDDALRIFHILE---EFGIVVTPACCALLINYLCWDRNL 734
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
A ++ L + + N L+R LC ++++A
Sbjct: 735 NAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDA 772
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+RR D C D + + A+ R L A+++ L +E V L
Sbjct: 74 TRRTVSDALICADLPAASRIRLFLYSAIKRRLRSPLLYSRAVSVLLASEPDAVAMFDALA 133
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF--VPTVRVYNILLKGLC 378
+ R G + A + A G EA+E G F PT VYN + + L
Sbjct: 134 DARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSR---MGDFDCRPTAFVYNAVFQVLV 190
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
D G +A+ +M GC+ N TY +L+DGLC+ G ++A ++ +EML R P V
Sbjct: 191 DRGVILLALALYNRMVSS-GCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDV 249
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ Y VL+ LC+ G+ +A L M PD ++ ++ +C
Sbjct: 250 KIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLC 295
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 205/440 (46%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++ L RI + EV+D+M C ++ + R+G +V +
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C T + N +L + ++ ++ A + LR + ++ I S N ++ LC
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEA-VGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + EM C P+ +++ L+ LC + +L M S+ G
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM----SEHGCTP 284
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E + A+ L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++E + +++ + G + ++L++M + G P ++ Y + K
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G++DEA+ +++ M P Y I+LKGLC AG A + +M +Q GC N
Sbjct: 404 EGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ-GCPPNP 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P+ ++SS+ ++
Sbjct: 522 MVNKGISPNTIIYSSIACAL 541
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 184/391 (47%), Gaps = 20/391 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++IG L + + EV+ QM C ++AT I + G L A + +
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +NT+LK + + + A L F + C +V + N+L+D CQ
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-----TFNILVDFFCQ 368
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + ++M GC PD +Y ++ G C + ++EA LL SM S G
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----SSCGCKP 424
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKS 282
+ V Y +L LC G+ DA +++ +++++G P + I+ C G +E A
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL-CKKGL-VEQAIE 482
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + AL
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++G V++ +++ + +K T + + V YN ++ LC + A+ + M GC+
Sbjct: 543 REGRVNKVIQMFDN--IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMP 599
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
N TY +L+ GL +G EA +L E+ R
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 194/431 (45%), Gaps = 10/431 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + E + E ++ ++ CE + ++ A + + L + + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNTL+ + + E H +L S +G R+ + ++D +C+ ++
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT--IIDGICKEGHLEV 304
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M G P+ Y+ ++KGLC+ R EA LL MF QK D V +
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFN 360
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C G + +++LE++L G + C +G I+ A L+
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL-IDEAVMLLKSMSS 419
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ SY+ + L + GR V+ ++++ +M +G P+ V + + L K G+V++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y +
Sbjct: 480 AIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSI 537
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
L R+GR + ++ + + + YN +I LC + A+ + M+S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 470 LPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 598 MPNESTYTMLI 608
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 8/439 (1%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P+Y ++ S V++ M C + G ++EAV L +
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
L+ F C S+N +LK + + L + + I + N L+ LC+
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ V +M GC PD Y ++ G+C + L A +L R+ G ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN----RMPSYGLKPNV 321
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T+L LC + ++A ++L ++ +K + + C +G ++ L+
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL-VDRVIELLE 380
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L G +P + +Y+ + EG I E +L M + G P+ V Y L L G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A E++ + M++ P +N L+ LC G A+ LK+M GC + +
Sbjct: 441 RWVDAEELMSQ-MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLIS 498
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++DGL + G+ EA +L M+ + P Y+ + L G+ + + + +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 466 SQAKLPDISVWSSLVASVC 484
D +++++++S+C
Sbjct: 559 DTTIRSDAVLYNAVISSLC 577
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC R AL V EM F+GC P YH++++ C + +L +M KG
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HAKG 176
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIE 278
D +L A+C+QG + +A+ +L K+ G +A + + LC D+E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
L++E + P++ +++ + L G +VL +M G P + MY +
Sbjct: 237 ---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-- 396
+ K+G ++ A E++ M P V YN +LKGLC A A L +M ++
Sbjct: 294 DGICKEGHLEVANEILNR-MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 --------------------------------VGCVANGETYGILVDGLCRDGRFLEASR 424
GC+ + TY +++G C++G EA
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+ M P +Y ++++GLCS G+ +A + +MI Q P+ +++L+ +C
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 43/319 (13%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ ++ +++GLC R+ +A +L M S KG +Y +L A C G ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEM----SFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++++LE + KG +D CN + + ++EA+ G + LA +
Sbjct: 165 SVRVLEAMHAKGCT--------LDTGNCNLVLNAICEQGCVDEAV--GLLRKLAFFGC-- 212
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
E IV + VL + W G V+E ++ EMV+
Sbjct: 213 -----EADIVSYNAVLKGLCMAKRW----------------GDVEELMD----EMVRVDC 247
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + +N L+ LC G L +MS+ GC + Y ++DG+C++G A+
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L M P V YN +++GLCS + EA L EM Q P V +++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF-QKDCPLDDVTFNILVDF 365
Query: 484 CCNTADLNVCRKTLEQLSS 502
C ++ + LEQ+ S
Sbjct: 366 FCQNGLVDRVIELLEQMLS 384
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ +LC G+ +A + L + + C G+ + +
Sbjct: 53 LIRSLCSAGRTAEAARALADAGDAAGVV---AYNAMVAGYCRAGQLAAARRLAAAVPV-- 107
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+ ++ + L GRI + +VLDEM KG P MY L A + G +
Sbjct: 108 --PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ V+E KG + T N++L +C+ G AV L+K++ GC A+ +Y ++
Sbjct: 166 VRVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVL 223
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC R+ + +++EM+ P + T+N LI LC G L +M
Sbjct: 224 KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
PDI ++++++ + C L V + L ++ S
Sbjct: 284 PDIRMYATIIDGI-CKEGHLEVANEILNRMPS 314
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 211/463 (45%), Gaps = 10/463 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++F E K N R N Y+ +I L E+ R+ E ++ +M C+ +
Sbjct: 248 AFRVF-EKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ G ++A+ + ++ CV ++ L+ + +E K+E A+ +F R
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF-RKMLKHG 365
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I + N L++ C+ A + M+ C P+ +Y+ LM+GLC + +A
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA- 424
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ + R+ G D V Y L+ C +G++ A I + GL+ +
Sbjct: 425 ---FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 481
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G +E A ++ + +G +++A+ G+ + + + M
Sbjct: 482 IDGLCKLGR-LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ + L AL KD ++EA ++ + M+K VP+V + IL++G C AG +A++
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGK-MMKYGLVPSVVTHTILIEGHCRAGETALS 599
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ L++M KQ GC N TY I+++GLC +GR EA +L M P TY VL++
Sbjct: 600 LKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 658
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS-VCCNTA 488
G+ A + M+ P+ ++S+L++ V NTA
Sbjct: 659 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTA 701
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 214/528 (40%), Gaps = 76/528 (14%)
Query: 10 TPTYLSQIIKKQKSPLT--ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMK 65
T TY I K +T A+K+ E K PN Y +I L +I E
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH----TYTILIDRLCREGKIEEAN 355
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V +M F I Y + G + A L + + NC +++N L++ +
Sbjct: 356 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 415
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ SK A +L R + R+ + N+L+D C+ + ++A ++F M+ G PD
Sbjct: 416 CRVSKSYKAFLLLRRVVDNGLLPDRV-TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD-- 243
++ L+ GLC RL +A +L SM +KG D V + L+ C GK +D
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMV----KKGISLDEVTFTALIDGHCKIGKAKDVC 530
Query: 244 ---------------------------------AMQILEKILRKGLKAPKSRRHRIDL-C 269
A +L K+++ GL P H I +
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL-VPSVVTHTILIEG 589
Query: 270 PCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE K L E + + G P++ +Y+ + L N GR+ E + +L M + G
Sbjct: 590 HCRAGETALSLKML--ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ Y + A K G +D A +++ MVK P +Y+ LL G N+A+
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFV-LSNTAIGAR 705
Query: 389 YLKKMS-----------KQVGCVANG---------ETYGILVDGLCRDGRFLEASRVLEE 428
L C++N + Y LV GLC++GR +EA ++ ++
Sbjct: 706 ALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQD 765
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
M+ +P + + +I C K + +++ ++ +P + +
Sbjct: 766 MVKHGLFP-DKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASY 812
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 35/368 (9%)
Query: 140 RSCYGWEVKSRIQSLNLLMD-------------VLCQCRRSDL-------ALHVFQEMDF 179
+S Y +++ RIQ L +L+ ++ +C S+ AL E+ F
Sbjct: 96 QSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGF 155
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ YP Y L+ L +LN + + ++ R+ +G + YRT++ ALC G
Sbjct: 156 RLSYP---CYSTLLMCLA---KLNMG-FVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG 208
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPC---NDGEDIEGAKSLINEALIRGGIPSL 296
+Q A K+LR G + L C + GE + + E R P+
Sbjct: 209 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCR---PNS 265
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS + L GR+ E ++ EM KG PS Y + A GM D+A+++++E
Sbjct: 266 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 325
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
K VP V Y IL+ LC G A +KM K G T+ L++G C++
Sbjct: 326 MATKAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIITFNALINGYCKE 383
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G + A ++L M + P + TYN L+ GLC + K Y+A + L ++ LPD +
Sbjct: 384 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 443
Query: 477 SSLVASVC 484
+ LV C
Sbjct: 444 NILVDGFC 451
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 165/375 (44%), Gaps = 28/375 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G + ++I L + R+ + ++ M + F I + + G+ + LF
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+N+ + C+ +FN L + K+ KL A+ + L + + + + +L++ C+
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM-LGKMMKYGLVPSVVTHTILIEGHCR 592
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ L+L + + M GC P+ +Y I++ GLCN+ R+ EA +L+SM S G
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM----SSFGVSP 648
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ A G++ A QI+ +++ G + P S + L GA++L
Sbjct: 649 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ-PNSHIYSALLSGFVLSNTAIGARAL 707
Query: 284 --------------------INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
++ + + G+P+ Y+ + + L EGRI+E D++ +M
Sbjct: 708 SSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 767
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G +P + + + K D LE + + ++ FVP+ Y ++ GL + G
Sbjct: 768 KHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM-KLVLDNKFVPSFASYCWVIHGLRNEGRV 825
Query: 384 AVAVMYLKKMSKQVG 398
A + + + G
Sbjct: 826 QEAQKLVSDLVRHTG 840
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 47/436 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
Y S++ L + R + +EV M D+C V F I + RAG+L EA+ +K
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAM--DACGVAPDVRSFNMLIGGFCRAGELEEALRFYK 288
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ SF+ L+ + +++ A +LR + + +++ C+
Sbjct: 289 EMRGRRVTPDVVSFSCLIGLFTRRGEMDHA-AEYLREMREFGLMPDGVIYTMVIGGFCRA 347
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V EM GC PD +Y+ L+ GLC +RRL++A LL M ++G D
Sbjct: 348 GLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM----KERGVPPD 403
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ + TL+ C G I+ A+Q + I + L+
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR--------------------------- 436
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
P + +Y+ + + +G + + +++ D+M ++ +P+ V Y + + +
Sbjct: 437 ---------PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G VD A ++E + KG VP + YN ++KG C +GN + +L KM + + +
Sbjct: 488 GQVDNAFAFLDEMVNKG-IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM-RHDKVMPDLI 545
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+ G ++G+ EA +L+ M + P TYN++I G G EA ++M
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605
Query: 465 ISQAKLPDISVWSSLV 480
++ PD + S++
Sbjct: 606 GARGIEPDRYTYMSMI 621
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 179/395 (45%), Gaps = 10/395 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ +Y + Q E ++ + + + N ++ + +EAA L + S
Sbjct: 166 VHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMAL-IDSMVSKG 224
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + + N ++ L + R D A VF+ MD G PD S+++L+ G C L EA
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
M R D+V + L+ +G++ A + L ++ GL +
Sbjct: 285 RFYKEMRGRRVTP----DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G +E A + +E + G +P + +Y+ + L E R+ + +++L+EM+ +G
Sbjct: 341 IGGFCRAGLMLE-ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +DG +++AL+ + + P + YN L+ G+C G+ A
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDT-ISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458
Query: 387 VMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
M S+++ N TY IL+D C G+ A L+EM+ + P + TYN +I
Sbjct: 459 NELWDDMHSREI--FPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G C G + +L +M +PD+ +++L+
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 187/421 (44%), Gaps = 10/421 (2%)
Query: 63 EMKEVIDQMKGDSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
E+ VI +M+ C D V + RAG + A++L ++ ++N++
Sbjct: 177 EVDTVISEME-KRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSV 235
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
LK +++ + + A +F R+ V ++S N+L+ C+ + AL ++EM +
Sbjct: 236 LKGLLRNGRWDKAREVF-RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD S+ L+ ++ A L M + G D VIY ++ C G +
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREM----REFGLMPDGVIYTMVIGGFCRAGLM 350
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A+++ ++++ G P + L + A+ L+NE RG P L +++
Sbjct: 351 LEALRVRDEMVAFGC-LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ +G I + + D + + P +V Y + + + G + +A E+ ++ +
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F P Y+IL+ C+ G A +L +M + G V N TY ++ G CR G +
Sbjct: 470 IF-PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK-GIVPNIMTYNSIIKGYCRSGNVSK 527
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ L +M P + TYN LI G GK +EA L+ M ++ PD ++ +++
Sbjct: 528 GQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIIS 587
Query: 482 S 482
Sbjct: 588 G 588
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 195/458 (42%), Gaps = 51/458 (11%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ + S + VF IRTY ++ + EA F+ L + N LL +
Sbjct: 75 DIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAAL 134
Query: 126 VKES--KLEA-AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ L A A+ L L S EV + +LN+++ C+ + V EM+ +
Sbjct: 135 SRAGWPHLTADAYRLVLSS--NSEVNT--YTLNIMVHSYCKTLQFGEVDTVISEMEKRCV 190
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD ++++++ + A L+ SM KG +V Y ++L L G+
Sbjct: 191 FPDVVTHNVMVDARFRAGDVEAAMALIDSMV----SKGIKPGLVTYNSVLKGLLRNGRWD 246
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A ++ + G+ AP R + + C GE +E A E R P + S+S
Sbjct: 247 KAREVFRAMDACGV-APDVRSFNMLIGGFCRAGE-LEEALRFYKEMRGRRVTPDVVSFSC 304
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G + + L EMR G P V+Y + + G++ EAL V +EMV
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRV-RDEMVAF 363
Query: 362 TFVPTVRVYNILLKGLC------DA-----------------------------GNSAVA 386
+P V YN LL GLC DA GN A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ + +S Q + TY L+DG+CR G +A+ + ++M R +P TY++LI
Sbjct: 424 LQFFDTISDQR-LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G+ A +L+EM+++ +P+I ++S++ C
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC 520
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 177/414 (42%), Gaps = 53/414 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL+ +KE + + + ++ +IG+ + + E + +M+ ++
Sbjct: 283 ALRFYKEMRGR--RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + RAG + EA+ + + F C+ ++NTLL + KE +L A L
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL--------- 391
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
EM +G PD ++ L+ G C D + +A
Sbjct: 392 ---------------------------LNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
F IS + DIV Y TL+ +C QG + A ++ + + + + P + I
Sbjct: 425 QF----FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI-FPNHVTYSI 479
Query: 267 DL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A + ++E + +G +P++ +Y+++ G + +G + L +MR
Sbjct: 480 LIDSHCEKGQ-VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD 538
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P L+ Y + K+G + EA L+++E E V+ P YN+++ G GN
Sbjct: 539 KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ----PDAVTYNMIISGFSVHGN 594
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
A KKM + G + TY +++G G ++ ++ +EML + P
Sbjct: 595 MQEADWVYKKMGAR-GIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N T I+V C+ +F E V+ EM R +P V T+NV++ G A+ +
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 462 EEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ M+S+ P + ++S++ + N + R+ + +C
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRN-GRWDKAREVFRAMDACG 259
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 176/378 (46%), Gaps = 8/378 (2%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQ + + T S+N LL+ + K + + + + + L+ LCQ +R
Sbjct: 9 SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTY-NDMLAAGCVPNTYTYGYLLRSLCQAQR 67
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A VF+ M QGC P+ SY IL+ GLC ++++EA LL M G ++V
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI----DGGHQPNVV 123
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +LL LC GK+++A+ + +++ +G P + + + + D+ A L E
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +G IP++ +Y+++ +G + +M +G P++ + L K G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA + E G P V YN L++G+C G A L++M + G + +Y
Sbjct: 243 MVEAHRLFLEMRSLGC-PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS-GVGPDIVSY 300
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+DG + G A ++ E+ P +Y+ +I LC GK A + ++MI+
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 467 QAKLPDISVWSSLVASVC 484
PD +V LV +C
Sbjct: 361 NGSAPDAAVVIPLVIGLC 378
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 187/436 (42%), Gaps = 8/436 (1%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+Y H Y ++ +L++S R + + M C + +R+ +A + EA
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEA 71
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+F+ ++ C S++ L+ + + K++ A L G + + + L+
Sbjct: 72 RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLS 130
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ +F M ++GC PD Y++L+ G + EA Y +F + +K
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA----YRLFEEMLEK 186
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + Y +LL +G+ + + +LR+G + + C G+ +E
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE- 245
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E G P + SY+ + + ++G+ E ++L EM G P +V Y +
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G +D A+++ E + K P Y+ ++ LC AG A + K M G
Sbjct: 306 GYSKSGALDHAIKLFYE-IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN-GS 363
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ LV GLCR R E+ + + M+ P + YN+L+ LC + +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Query: 460 WLEEMISQAKLPDISV 475
E+ + PD+ +
Sbjct: 424 IFHELTERGFSPDVEI 439
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 8/403 (1%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
A++G+ + + ++ CV T ++ LL+ + + + E A +F R
Sbjct: 28 AKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF-RGMAAQGCSPN 86
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S ++L+ LC+ ++ D A + EM G P+ +Y L+ GLC +L EA L
Sbjct: 87 VFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFS 146
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M +R G D V+Y L+ +G + +A ++ E++L KG P + L
Sbjct: 147 RMVYR----GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC-IPTVFTYNSLLSG 201
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ + +SL + L +G +P++ +++ + G +VE ++ EMR+ G P
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + G EA ++ E M++ P + YNIL+ G +G A+
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLLRE-MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++ K G + +Y ++D LCR G+ A V ++M+ P L+ GLC
Sbjct: 321 YEIPKS-GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
+ E+ + M+ +P I ++ L+ +C +VC
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 7/338 (2%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
++ N Y S++ L + ++ E ++ +M C V+ I +++ G + EA
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
LF+ + + C+ ++N+LL ++ + LF + I + N L+D
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF-KDMLRQGCVPNIFTFNNLLD 235
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ A +F EM GC PD SY+ L++G+C+ + +EA LL M +
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI----RS 291
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G G DIV Y L+ G + A+++ +I + GL+ I C C G+ +
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK-VGA 350
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A + + + G P A + I L R+ E ++ M P + Y +
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L K D+ E+ E +G F P V + ++L+ L
Sbjct: 411 KLCKAKRSDDVCEIFHELTERG-FSPDVEISKVILETL 447
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
W SQ + Y LL L G+ +L G P + + L
Sbjct: 6 WAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGC-VPNTYTYGYLLRSLCQ 64
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ E A+S+ +G P++ SYS + L ++ E ++L+EM G P++V
Sbjct: 65 AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT 124
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + L+ L K G + EA+++ + +G P VYN+L+ G G+ A ++M
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ GC+ TY L+ G R G F + ++ML + P + T+N L+ G C +G
Sbjct: 184 LEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA EM S PD+ +++L+ +C
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 187/428 (43%), Gaps = 12/428 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFK 104
Y S++ L + R + KEV M D C V F I + R G++ EAV +K
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTM--DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ SF+ L+ + +++ A +LR G + +++ C+
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA-YLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V EM GC PD +Y+ L+ GLC RL +A LL M ++G D
Sbjct: 346 GSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM----EERGVTPD 401
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ + TL+ C QG ++A+Q+ + +LR+ L+ + + C G D+ A L
Sbjct: 402 LCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKG-DLAKANELW 460
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ R +P+ +YS + +G++ + LDEM KG P++ Y + + +
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V + + +++ M + P + +N L+ G N A M K++ +
Sbjct: 521 GNVKKGQQFLQK-MRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM-VRPDAV 578
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY ++++G G +A RV + M P TY LI G + G +A +EM
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638
Query: 465 ISQAKLPD 472
I + PD
Sbjct: 639 IHRGFAPD 646
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 202/457 (44%), Gaps = 16/457 (3%)
Query: 32 KEAKEKYPNYR----HNGPVYAS----MIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
++ +E + +R H PV AS ++ +LS + +E + E
Sbjct: 101 RKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTL 160
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ +Y + + + A ++ + + + N L+ + ++AA I + S
Sbjct: 161 NIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA-IALVDSMA 219
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+K I + N ++ LC+ RR D A VF+ MD PD S++IL+ G C +
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA M R D+V + L+ +G++ A L ++ GL P
Sbjct: 280 EAVKFYKEMQHRYVTP----DVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL-VPDGVI 334
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + + + A + +E + G +P + +Y+ + L + R+++ +K+L+EM
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P L + + + G + AL++ + +++ P V YN L+ G+C G+
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDT-LLRQRLRPDVVTYNSLIDGMCRKGDL 453
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A A M + + N TY IL+D C G+ +A L+EM+ + P + TYN
Sbjct: 454 AKANELWDDMHARE-ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+I+G C G + +L++M PD+ +++L+
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 184/426 (43%), Gaps = 10/426 (2%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R +E++ + S + VF IRTY ++ + EA F+ L + N
Sbjct: 67 RGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASN 126
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
LL + + A + R + + +LN+++ C+ D A V EM+
Sbjct: 127 ALLAVLSRAGWPHLAQEAY-RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ +PD ++++L+ ++ A L+ SM + +G IV Y ++L LC
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM----ANRGLKPGIVTYNSVLKGLCKHR 241
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ A ++ + + + AP R I + C GE E K E R P + S
Sbjct: 242 RFDKAKEVF-RTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVK-FYKEMQHRYVTPDVVS 299
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+S + G + L EM+ G P V+Y + + G + EAL V +EM
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEM 358
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
V +P V YN LL GLC A L +M ++ G + T+ L+ G CR G
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER-GVTPDLCTFTTLIHGYCRQGN 417
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
F A ++ + +L + P V TYN LI G+C G +A ++M ++ LP+ +S
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477
Query: 479 LVASVC 484
L+ S C
Sbjct: 478 LIDSHC 483
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 174/391 (44%), Gaps = 12/391 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG ++ A++L +++ ++N++LK + K + + A +F R+ V +
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF-RTMDQCSVAPDV 262
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S N+L+ C+ A+ ++EM + PD S+ L+ ++ A L
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322
Query: 212 MFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M KG G D VIY ++ C G + +A+++ ++++ G P + L
Sbjct: 323 M------KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC-LPDVVTYNTLLN 375
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ A+ L+NE RG P L +++ + +G ++ D + + P
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+V Y + + + + G + +A E + ++M +P Y+IL+ C+ G A +
Sbjct: 436 DVVTYNSLIDGMCRKGDLAKANE-LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGF 494
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L +M K+ G + N TY ++ G CR G + + L++M + +P + T+N LI G
Sbjct: 495 LDEMVKK-GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYI 553
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ A M + PD ++ ++
Sbjct: 554 KEENMHGAFNVFNIMEKEMVRPDAVTYNMII 584
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 182/389 (46%), Gaps = 9/389 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L++A+S F + + T FN LL + K + L + + + +LN
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS-NQMDSFGIPPDVYTLN 108
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C R A V ++ G PD ++ L++GLC + ++ +A HL F +
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHL----FDK 164
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC G A+++L + + + I C D +
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A +L ++ + +G P + +Y+++ L N +L++M P +V++
Sbjct: 225 VTE-AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 283
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G + EA +V++ +++G P V YN L+ G C AV M
Sbjct: 284 TVVDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G N +Y L++G C+ R +A+ + EEM + P TYN L+ C +G+
Sbjct: 343 N-GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQ 400
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ EM++ ++PD++ + L+ +C
Sbjct: 401 DAIALFHEMVAHGQIPDLATYRILLDYLC 429
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 202/447 (45%), Gaps = 44/447 (9%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ +A+ LF + ++ TL+ + K AA I LR
Sbjct: 140 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA-IRLLR 198
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + ++D LC+ R+ A ++F +M QG PD +Y L+ LCN
Sbjct: 199 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 258
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
T LL M I+ K D+VI+ T++ ALC +GKI +A +++ ++ +G++
Sbjct: 259 EWKHVTTLLNQM---INSK-IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 314
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLYN 308
+ + C E E K + + + G P++ SY+ + A L+
Sbjct: 315 VTYNALMDGHCLQSEMDEAVK-VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 373
Query: 309 E----------------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
E GR+ + + EM G P L Y L L K
Sbjct: 374 EMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 433
Query: 347 VDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+DEA+ +++ ++G+ + P +++Y I++ G+C AG A +S + G N T
Sbjct: 434 LDEAMALLKT--IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK-GLRPNVRT 490
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++GLCR G EA+++ EM P TYN + +GL + A+ L+EM+
Sbjct: 491 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550
Query: 466 SQAKLPDISVWSSLVASVCCNTADLNV 492
++ D+S + LV +C + D +V
Sbjct: 551 ARGFSADVSTTTLLVEMLCDDKLDQSV 577
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 190/448 (42%), Gaps = 40/448 (8%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ +L A S+ + + T +F TL++ + E K+ A LF + G
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM-IGEG 169
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L++ LC+ ++ A+ + + M+ C PD Y ++ LC DR++ EA
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA- 228
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+++F ++ +G DI Y +L+ +LC+ + + +L +++ + +
Sbjct: 229 ---FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ I A +++ +IRG P++ +Y+A+ + + E KV D M G
Sbjct: 286 VDALCKEGK-ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEE------------------------------ 356
+ P+++ Y + K +D+A + EE
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIA 404
Query: 357 ---EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
EMV +P + Y ILL LC + A+ LK + + + Y I++DG+
Sbjct: 405 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS-NMDPDIQIYTIVIDGM 463
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
CR G A + + + P V TY ++I GLC G EA EM PD
Sbjct: 464 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 523
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLS 501
++++ + N L + E L+
Sbjct: 524 CTYNTITQGLLQNKEALRAIQLLQEMLA 551
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 170/407 (41%), Gaps = 52/407 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY S+I L + ++TE + +M G + + I + + +L +
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAH----ILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ F+T++ + KE K+ AH ++ +R V+ + + N LMD C
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG-----VEPNVVTYNALMDGHC 325
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D A+ VF M G P+ SY+ L+ G C +R+++AT+L F + QK
Sbjct: 326 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL----FEEMCQKELI 381
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ V Y TL+ C G++QDA+ +
Sbjct: 382 PNTVTYNTLMHX-CHVGRLQDAI------------------------------------A 404
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E + G IP LA+Y + L + + E +L + P + +Y + +
Sbjct: 405 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 464
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G ++ A ++ KG P VR Y I++ GLC G A +M GC +
Sbjct: 465 RAGELEAARDIFSNLSSKG-LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN-GCSPD 522
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
G TY + GL ++ L A ++L+EML R + V T +L+ LC
Sbjct: 523 GCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
+ L+EA++L K + N Q + ++ M + +LEAA +F + ++ +
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF-SNLSSKGLRPNV 488
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ ++++ LC+ D A +F EMD GC PD +Y+ + +GL ++ A LL
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
M R G D+ L+ LCD Q QIL + ++
Sbjct: 549 MLAR----GFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 194/455 (42%), Gaps = 25/455 (5%)
Query: 46 PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
P++A + +L S+ M + + + S FA + ++ AG+ +AV F
Sbjct: 101 PLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAF 160
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +F +NT+LK +V + A L+ R +R + N+LMD LC+
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNR-ATYNVLMDGLCK 219
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ AL +F EM +G P+ + Y +L+ LCN +++EA LL SM KG
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM----KDKGCLP 275
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V Y L LC G++ +A Q L +L+ G A + + + +
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
L R P + Y+ M GRI + LD M+ KGF P Y L L
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G ++ A + EM++ V I++ GLC G A+ +M + GC
Sbjct: 395 HGDLERA-HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEH-GCDPTV 452
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV--------------ETYNVLIRGLC 449
TY L+DG R+GR LE +R+L + P + E+ L+ +C
Sbjct: 453 MTYNALIDGFYREGR-LEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMC 511
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A L +I +PD+ +++L+ +C
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 198/445 (44%), Gaps = 28/445 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L + + ++ D+M ++ + + AG+++EAV L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++ C+ ++N L + K ++ EA L + G+ + ++ + L+D L
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG--LKGYSCLIDGLF 323
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q RR D ++ M + PD Y I+++G R+ +A L M +KG
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM----KKKGFV 379
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAK 281
D Y T+L LCD G ++ A + ++L+ L S I +C C G ++ A
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL-VLDSTTQTIMICGLCKRGL-VDEAM 437
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ +E G P++ +Y+A+ Y EGR+ E + +M G PSL + A
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTLGANQ 496
Query: 342 FKD--------------GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+D G V +A +++ ++ VP V YN L+ GLC A N AV
Sbjct: 497 VRDSESLRKLVHDMCQSGQVLKAYKLLRS-IIDSGVVPDVVTYNTLINGLCKARNLDGAV 555
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
K++ + G + TYG L+DGL R R +A + + +L P + YN ++R
Sbjct: 556 RLFKELQLK-GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRS 614
Query: 448 LCSIGKQYEAV-MWLEEMISQAKLP 471
LC + K +A+ +WL+ + + P
Sbjct: 615 LCRMKKLSQAINLWLDYLPKKYNFP 639
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 164/330 (49%), Gaps = 7/330 (2%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N ++ C+ R + A V M +G PD +Y+I++ LCN R+L A +L +
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++ Y L+ A +G I +AM++LE++L +GL + I C +G
Sbjct: 201 ----DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+E A LI +G P + SY+ + N+G+ EG+K++ EM ++G P+ V Y
Sbjct: 257 M-VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 315
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+++L + G +DEA+ V++ M++ P Y+ L+ LC G +A+ + M
Sbjct: 316 SILISSLCRFGRIDEAISVLKV-MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
GC+ + Y ++ LC++G +A + ++ P V +YN +I L S G +
Sbjct: 375 SN-GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ + MIS+ PD ++SL++ +C
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLC 463
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 18/335 (5%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C+ + + +L+ + + +G PD L+KG N + + +A+ ++ I
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-----EI 128
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ + D+ Y ++ C +I+ A Q+L ++ +G P + I + +
Sbjct: 129 LESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF-LPDIVTYNIMIGSLCNRRK 187
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A ++++ L+ +P++ +Y+ + EG I E K+L+EM +G P + Y A
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK-----GLCDAGNSAVAVMYLK 391
+ + K+GMV+ A E+I KG P V YNILL+ G D G VA M+ +
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGC-KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
GC N TY IL+ LCR GR EA VL+ M+ + P +Y+ LI LC
Sbjct: 307 ------GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ A+ ++ MIS LPDI +++++A++C N
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 395
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 55/408 (13%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLAL 171
++N ++ K +++EAA + R +K+R I + N+++ LC R+ LAL
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNR------MKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V ++ C P +Y IL++ + +NEA LL M R G D+ Y +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR----GLLPDMYTYNAI 248
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIR 290
+ +C +G ++ A +++ + KG K P + I L N G+ EG K L+ E R
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCK-PDVISYNILLRAFLNQGKWDEGEK-LVAEMFSR 306
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P+ +YS + L GRI E VL M K P Y+ ++AL K+G +D A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-------- 402
+ ++ + M+ +P + YN +L LC GN+ A+ K+ + +GC N
Sbjct: 367 IGIM-DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMI 424
Query: 403 ------GE---------------------TYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G+ TY L+ LCRDG EA +L++M +
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P V +YN+++ GLC + + +A+ EMI + P+ + + L+ +
Sbjct: 485 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 183/386 (47%), Gaps = 8/386 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG L ++ +V+DQ+ D+C + I G +NEA+ L + +
Sbjct: 174 TYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 233
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N +++ M KE +E A L + S K + S N+L+ +
Sbjct: 234 LARGLLPDMYTYNAIIRGMCKEGMVERAAEL-ITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D + EM +GC P++ +Y IL+ LC R++EA +L M +K D
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI----EKELTPDTY 348
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ ALC +G++ A+ I++ ++ G + I C +G + A + N+
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG-NANQALEIFNK 407
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P+++SY+ M L++ G ++ M +KG P + Y + ++ L +DG+
Sbjct: 408 LRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGL 467
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+EA+ ++ ++M + F PTV YNI+L GLC A+ +M ++ GC N TY
Sbjct: 468 VEEAIGLL-DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK-GCRPNETTY 525
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIR 432
+L++G+ G EA + + R
Sbjct: 526 ILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 157/378 (41%), Gaps = 48/378 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L + + A+K+ +E A+ P+ Y ++I + + +
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY----TYNAIIRGMCKEGMVER 260
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
E+I + C+ + +R + G+ +E L + C +++ L+
Sbjct: 261 AAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 320
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + +++ A I L+ E+ S + L+ LC+ R DLA+ + M GC
Sbjct: 321 SLCRFGRIDEA-ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ LC + N+A + F ++ G ++ Y T++ AL G
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEI----FNKLRGMGCPPNVSSYNTMISALWSCGDRSR 435
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ ++ ++ KG+ + + + C C DG L+ EA+
Sbjct: 436 ALGMVPAMISKGVDPDEITYNSLISCLCRDG--------LVEEAI--------------- 472
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+LD+M GF P+++ Y L L K +D+A+ + E + KG
Sbjct: 473 -------------GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC- 518
Query: 364 VPTVRVYNILLKGLCDAG 381
P Y +L++G+ AG
Sbjct: 519 RPNETTYILLIEGIGFAG 536
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 199/455 (43%), Gaps = 42/455 (9%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFN 119
+E++ ++ MK F+ I +A G ++ A+ ++ + + CV S N
Sbjct: 82 FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 120 TLLKEMVKESKLEAAHILF------------LRSCY-------------GWEVKSR---- 150
+LL +VK K+E A ++ C GW++ +
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201
Query: 151 -----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
I N L+D C+ ++ A +F+E+ +G P ++Y ++ G C +
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M S++G I IY ++ A G +A + +++ G + +
Sbjct: 262 DKLLVEM----SERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNI 317
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C+ GE + A+ L+ +A+ RG +P+ SY+ + + +G + +L +M +
Sbjct: 318 LITGSCSCGE-VHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSER 376
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P LV Y A + L G VD AL V +MV+ +P +YN+L+ GLC G
Sbjct: 377 GHKPDLVTYAALIHGLIVAGEVDVALTV-RNKMVEKGVLPDANIYNVLMSGLCKKGRLPA 435
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A + L +M Q + LVDG R G F EA ++ E + + P V YN +I
Sbjct: 436 AKVLLAEMLDQ-NVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMI 494
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G C G +A++ + MI PD +S+++
Sbjct: 495 KGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 211/529 (39%), Gaps = 46/529 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + + L ++ K A K++ E ++ N + M+ L + ++ +
Sbjct: 135 PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDR--NGEVDNYTVCIMVKGLCKEGKVEDGW 192
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++I++ G C + T I Y + G A LFK L + +++ ++
Sbjct: 193 KLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGF 252
Query: 126 VKESKLEAA----------------HIL-------FLRSC-------YGWEVKS----RI 151
K+ K E HI F C GW +KS +
Sbjct: 253 CKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDM 312
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+L+ C C A + ++ +G P++ SY L+ C A LL
Sbjct: 313 ATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIK 372
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP- 270
M S++G D+V Y L+ L G++ A+ + K++ KG+ P + + + +
Sbjct: 373 M----SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGV-LPDANIYNVLMSGL 427
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G + AK L+ E L + P + + G E K+ + KG P
Sbjct: 428 CKKGR-LPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPG 486
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y A + K GM+ +AL + + M++G P Y+ ++ G + A+
Sbjct: 487 VVGYNAMIKGYCKFGMMKDAL-LCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M K C N TY +L++G C G A + ++ML P V TY +LI C
Sbjct: 546 GLMVKG-ACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCK 604
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
+A + E+M+ + LP+ ++ L+ + N D + + EQ
Sbjct: 605 GVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL-TNNVDFVISNQRSEQ 652
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
I +P + S +++ L G++ KV DEM + + L K+G V+
Sbjct: 130 IHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVE 189
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+ ++IE+ +G +P + YN L+ G C G++ A + K++ K G + +TYG
Sbjct: 190 DGWKLIEKRWGRGC-MPNIVFYNTLIDGYCKKGDTERANVLFKEL-KMKGFLPTVKTYGA 247
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSY----------------------------W----- 435
+++G C+ G+F ++L EM R W
Sbjct: 248 IINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG 307
Query: 436 --PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYN+LI G CS G+ ++A LE+ I + LP+ ++ L+ + C
Sbjct: 308 CDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYC 358
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E + +L M++K P+ + ++ G+VD ALE + VP V N L
Sbjct: 84 EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
L L G +A +M + G V N T I+V GLC++G+ + +++E+ R
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDN-YTVCIMVKGLCKEGKVEDGWKLIEKRWGRG 202
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
P + YN LI G C G A + +E+ + LP + + +++ C V
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGF-CKKGKFEVV 261
Query: 494 RKTLEQLS 501
K L ++S
Sbjct: 262 DKLLVEMS 269
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/487 (19%), Positives = 174/487 (35%), Gaps = 84/487 (17%)
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E + + M C+ + + I G++++A L + + + S+ L+
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354
Query: 123 KEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K+ + L A +L S G K + + L+ L D+AL V +M +G
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGH--KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSM----------------------------- 212
PD Y++LM GLC RL A LL M
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472
Query: 213 --FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
F +KG +V Y ++ C G ++DA+ +++++ GL +P + +
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ-GLHSPDEFTYSTIIDG 531
Query: 271 CNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
D+ GA + +++G P++ +Y+ + G I +K +M + P
Sbjct: 532 YIKMNDLHGALRMFG-LMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKP 590
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD---------- 379
++V Y + K + +A E+ M+ +P YN L+ GL +
Sbjct: 591 NVVTYTILIGCFCKGVNLTKACSFFEQ-MLMEKCLPNDVTYNYLMNGLTNNVDFVISNQR 649
Query: 380 --------------------------AGNSAVAVMYLKKMSKQV----------GCVANG 403
+ NS + + KM K G + +
Sbjct: 650 SEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDP 709
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+ L+ GLC +GR + + V+ L Y+ + S G+ EA + L
Sbjct: 710 VSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHS 769
Query: 464 MISQAKL 470
+ Q L
Sbjct: 770 LADQFSL 776
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 140/363 (38%), Gaps = 21/363 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ L + R+ K ++ +M + + AT + + R G EA LF+
Sbjct: 419 IYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELT 478
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +N ++K K ++ A + F R G + + ++D +
Sbjct: 479 IEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEF-TYSTIIDGYIKMND 537
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSGEDI 225
AL +F M C P+ +Y +L+ G C +N A M R+ ++
Sbjct: 538 LHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKP-----NV 592
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKIL-RKGLKAPKSRRH-------RIDLCPCNDGEDI 277
V Y L+ C + A E++L K L + + +D N +
Sbjct: 593 VTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSE- 651
Query: 278 EGAKSLINEA----LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ SL+ E+ + G ASY+++ I L + + D+M +KGF P V
Sbjct: 652 QTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVS 711
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
A L L +G + VI ++ + V+ Y+ L G ++ A + L +
Sbjct: 712 LVALLHGLCLEGRSQDWNNVISCKLNERELQVAVK-YSEKLDAFLSQGQTSEASLILHSL 770
Query: 394 SKQ 396
+ Q
Sbjct: 771 ADQ 773
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 189/436 (43%), Gaps = 13/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ E ++D M C+ + + ++ +A+ + +
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A R S YG++ + S ++ LC +
Sbjct: 238 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT--VSYTTVLKGLCAAK 295
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + +F EM + C P+ ++ +L++ C + A +L M S G +
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM----SGHGCAANT 351
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ ++ +C QG++ DA Q L + G +P + + L E E AK L+
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLK 410
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + + P+ +++ L +G I + ++++M G ++V Y A + G
Sbjct: 411 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD ALE+ K P Y LL GLC+A A L +M Q C N T
Sbjct: 471 RVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 525
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ +LV C+ G EA ++E+M+ P + TYN L+ G+ EA+ L ++
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585
Query: 466 SQAKLPDISVWSSLVA 481
S PDI +SS++
Sbjct: 586 SNGVSPDIVTYSSIIG 601
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 19/413 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ IR G++ EA+SL ++ C ++ LL+ + K + +A +L
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G I + N++++ +C+ R D A + G PD SY ++KGLC +
Sbjct: 238 RAKG--CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R + L F + +K + V + L+ C G ++ A+Q+LE++ G A
Sbjct: 296 RWEDVEEL----FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C G ++ A +N G P SY+ + L R + ++L
Sbjct: 352 TLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 410
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P+ V + + L + G++++A +IE+ G V V YN L+ G C
Sbjct: 411 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV-TYNALVNGFCVQ 469
Query: 381 G--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G +SA+ + Y + C N TY L+ GLC R A+ +L EML + P V
Sbjct: 470 GRVDSALELFY------SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 523
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNTAD 489
T+NVL+ C G EA+ +E+M+ P++ +++L+ + CN+ +
Sbjct: 524 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 217/515 (42%), Gaps = 50/515 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K A+++ E + K N Y +I + R+ + +
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK--GCTPNIVTYNVIINGMCREGRVDDAR 266
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E ++++ + + T ++ A + + LF + + NC+ +F+ L++
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ +E A I L G + N++++ +C+ R D A M GC PD
Sbjct: 327 CRGGMVERA-IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY ++KGLC R +A LL M +K + V + T + LC +G I+ A
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMV----RKNCPPNEVTFNTFICILCQKGLIEQAT 441
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI------------ 293
++E++ G + +I +L+N ++G +
Sbjct: 442 MLIEQMSEHGCEV-----------------NIVTYNALVNGFCVQGRVDSALELFYSMPC 484
Query: 294 -PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ +Y+ + L N R+ ++L EM K P++V + ++ + G++DEA+E
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-----TYG 407
++E+ M G P + YN LL G+ NS A+ L G V+NG TY
Sbjct: 545 LVEQMMEHGC-TPNLITYNTLLDGITKDCNSEEALELLH------GLVSNGVSPDIVTYS 597
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ L R+ R EA ++ + P YN ++ LC A+ + M+S
Sbjct: 598 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 657
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+P+ + +L+ + N L R L +L S
Sbjct: 658 GCMPNELTYITLIEGL-ANEDFLKETRDLLRELCS 691
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 21/408 (5%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
++F E EK N N + ++ + +V++QM G C ++ I
Sbjct: 302 ELFAEMMEK--NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 359
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYG 144
T + G++++A N+ + C T S+ T+LK + + + E A L ++C
Sbjct: 360 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
EV + N + +LCQ + A + ++M GC + +Y+ L+ G C R++
Sbjct: 420 NEV-----TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L YSM + + + Y TLL LC+ ++ A ++L ++L+K +
Sbjct: 475 ALELFYSMPCK-------PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C G ++ A L+ + + G P+L +Y+ + + + E ++L + +
Sbjct: 528 VLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P +V Y + + L ++ V+EA+++ G P +YN +L LC N+
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTD 645
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
A+ + M GC+ N TY L++GL + E +L E+ R
Sbjct: 646 GAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 692
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 154/328 (46%), Gaps = 10/328 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC+ R+ A V + + G D +Y+ L+ G C +L+ A L+ SM
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---- 170
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
D Y ++ LCD+G++ +A+ +L+ +L +G + P + + L
Sbjct: 171 ---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ-PSVVTYTVLLEAVCKSTG 226
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A +++E +G P++ +Y+ + + EGR+ + + L+ + + GF P V Y
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L L ++ E+ E M K +P +++L++ C G A+ L++MS
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNC-MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC AN I+++ +C+ GR +A + L M P +Y +++GLC + +
Sbjct: 346 -GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A L+EM+ + P+ +++ + +C
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILC 432
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 6/270 (2%)
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R + +G D+ + L+ LC +G+ DA ++L R G + + C G
Sbjct: 99 RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYG 158
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++ A+ LI + P +Y+ + L + GR+ E +LD+M +G PS+V Y
Sbjct: 159 Q-LDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 214
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
L A+ K +A+EV++E KG P + YN+++ G+C G A +L ++S
Sbjct: 215 TVLLEAVCKSTGFGQAMEVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDAREFLNRLS 273
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
G + +Y ++ GLC R+ + + EM+ ++ P T+++L+R C G
Sbjct: 274 -SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ LE+M + ++ + ++ ++C
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTIC 362
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L++ A RG P + + + +L GR + +VL G + Y +A
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ G +D A +I V P Y +++GLCD G A+ L M + GC
Sbjct: 153 GYCRYGQLDAARRLIASMPV----APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GC 207
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY +L++ +C+ F +A VL+EM + P + TYNV+I G+C G+ +A
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+L + S PD +++++ +C
Sbjct: 268 FLNRLSSYGFQPDTVSYTTVLKGLC 292
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K N N + + I IL + I + +I+QM CE +
Sbjct: 405 AKELLKEMVRK--NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G+++ A+ LF ++ C T ++ TLL + +L+AA L L +
Sbjct: 463 VNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAEL-LAEMLQKD 518
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+L+ CQ D A+ + ++M GC P+ +Y+ L+ G+ D EA
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 578
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL+ + G DIV Y +++ L + ++++A+++ + G++ ++I
Sbjct: 579 ELLHGLV----SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L C + +GA + G +P+ +Y + L NE + E +L E+ ++G
Sbjct: 635 LLALCKRC-NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V + L++ LC G ++ A L+ +++ G + Y LV G CR G+ A R
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRA-AERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ M + P TY +IRGLC G+ EA+ L++M+ + P + ++ L+ +VC
Sbjct: 166 LIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222
Query: 485 CNTA 488
+T
Sbjct: 223 KSTG 226
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y +++ L + R+ E++ +M C F + + + G ++EA+
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + + C ++NTLL + K+ E A + L V I + + ++ VL
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA-LELLHGLVSNGVSPDIVTYSSIIGVL 603
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ R + A+ +F + G P Y+ ++ LC +R N T F + G
Sbjct: 604 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC--KRCN--TDGAIDFFAYMVSNGC 659
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ + Y TL+ L ++ +++ +L ++ +G+
Sbjct: 660 MPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 190/436 (43%), Gaps = 43/436 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +MI S++N+I +V D+M+ + I + G+L A + L
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ C ++ L++ + E ++ A LF ++ + + N ++ +C+
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELF-DELVSRGLRPDLYTYNAIIRGICKEGME 252
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D AL + + +GC PD SY+IL++ N R + L+ M G ++V
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL----SGCEPNVVT 308
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ + C +G++++A+ +LE + KGL
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLT------------------------------ 338
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P SY + EGR+ + L++M + G P +V Y LA L K G
Sbjct: 339 ------PDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D AL+V E+ G PTVR YN + L GN A+ + +M ++ G + TY
Sbjct: 393 DLALDVFEKLDEVGC-PPTVRAYNTMFSALWSCGNKIKALEMISEMIRK-GIDPDEITYN 450
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ LCRDG EA +L +M + P V ++N+++ G+C + +E + L M+ +
Sbjct: 451 SLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEK 510
Query: 468 AKLPDISVWSSLVASV 483
LP+ + + L+ +
Sbjct: 511 GCLPNETSYVLLIEGI 526
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 180/420 (42%), Gaps = 51/420 (12%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K I Q + DS T +R + + + F NL N LL
Sbjct: 19 KPTIPQSRSDSIPACRFSNKTHLRNVTSSAEFRQP--HFPNLD-----NRDAHLMKLLNR 71
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K + + FL S K + L+ R A+ V + ++ G P
Sbjct: 72 SCRAGKHNES-LYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DP 129
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY+ ++ G +++ A + F R+ +G D+V Y ++ +LC +GK++ A
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQV----FDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA 185
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++++++L+ G K PS+ +Y+ +
Sbjct: 186 FEVMDELLKDGCK------------------------------------PSVITYTILIE 209
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EGRI E ++ DE+ ++G P L Y A + + K+GM D AL+ + +G
Sbjct: 210 ATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGC-N 268
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V YNILL+ + +K M GC N T+ IL+ CR+GR EA
Sbjct: 269 PDVVSYNILLRSFLNKSRWEDGERLMKDMVLS-GCEPNVVTHSILISSFCREGRVREAVN 327
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VLE M + P +Y+ LI C G+ A+ +LE+M+S LPDI +++++A++C
Sbjct: 328 VLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLC 387
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 10/377 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG L ++ EV+D++ D C+ + I G++NEA+ LF L
Sbjct: 168 TYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL 227
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N +++ + KE +E + F+R + S N+L+ R
Sbjct: 228 VSRGLRPDLYTYNAIIRGICKEG-MEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSR 286
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + ++M GC P+ ++ IL+ C + R+ EA ++L M +KG D
Sbjct: 287 WEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM----KEKGLTPDSY 342
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG-EDIEGAKSLIN 285
Y L+ A C +G++ A++ LEK++ G + I C G D+ A +
Sbjct: 343 SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL--ALDVFE 400
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ G P++ +Y+ M L++ G ++ +++ EM KG P + Y + ++ L +DG
Sbjct: 401 KLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+VDEA+ ++ +M F PTV +NI+L G+C A + L M ++ GC+ N +
Sbjct: 461 LVDEAIGLL-VDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEK-GCLPNETS 518
Query: 406 YGILVDGLCRDGRFLEA 422
Y +L++G+ G EA
Sbjct: 519 YVLLIEGIAYAGWRAEA 535
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 179/373 (47%), Gaps = 18/373 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLAL 171
S+N ++ K +++++A+ +F R ++SR + + N+++ LC + +LA
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDR------MRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V E+ GC P +Y IL++ + R+NEA L F + +G D+ Y +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALEL----FDELVSRGLRPDLYTYNAI 242
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ +C +G A+ + + +G P + I L + E + L+ + ++ G
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCN-PDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ ++S + EGR+ E VL+ M+ KG P Y+ ++A K+G +D A+
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAI 361
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E +E+ MV +P + YN +L LC G + +A+ +K+ +VGC Y +
Sbjct: 362 EYLEK-MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLD-EVGCPPTVRAYNTMFS 419
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
L G ++A ++ EM+ + P TYN LI LC G EA+ L +M + P
Sbjct: 420 ALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQP 479
Query: 472 DISVWSSLVASVC 484
+ ++ ++ +C
Sbjct: 480 TVISFNIVLLGMC 492
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++ +I R+ E V++ MK + I + + G+L+ A+
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMD 159
+ + C+ ++NT+L + K + A +F + C +++ N +
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGC-----PPTVRAYNTMFS 419
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L C AL + EM +G PD +Y+ L+ LC D ++EA LL M Q
Sbjct: 420 ALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQP 479
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
++ + +L +C ++ + +++L ++ KG
Sbjct: 480 ----TVISFNIVLLGMCKAHRVFEGIELLITMVEKG 511
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 211/463 (45%), Gaps = 10/463 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++F E K N R N Y+ +I L E+ R+ E ++ +M C+ +
Sbjct: 225 AFRVF-EKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ G ++A+ + ++ CV ++ L+ + +E K+E A+ +F R
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF-RKMLKHG 342
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I + N L++ C+ A + M+ C P+ +Y+ LM+GLC + +A
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA- 401
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ + R+ G D V Y L+ C +G++ A I + GL+ +
Sbjct: 402 ---FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 458
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G +E A ++ + +G +++A+ G+ + + + M
Sbjct: 459 IDGLCKLGR-LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ + L AL KD ++EA ++ + M+K VP+V + IL++G C AG +A++
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGK-MMKYGLVPSVVTHTILIEGHCRAGETALS 576
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ L++M KQ GC N TY I+++GLC +GR EA +L M P TY VL++
Sbjct: 577 LKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 635
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS-VCCNTA 488
G+ A + M+ P+ ++S+L++ V NTA
Sbjct: 636 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTA 678
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 206/521 (39%), Gaps = 65/521 (12%)
Query: 10 TPTYLSQIIKKQKSPLT--ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMK 65
T TY I K +T A+K+ E K PN Y +I L +I E
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH----TYTILIDRLCREGKIEEAN 332
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V +M F I Y + G + A L + + NC +++N L++ +
Sbjct: 333 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 392
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ SK A +L R + R+ + N+L+D C+ + ++A ++F M+ G PD
Sbjct: 393 CRVSKSYKAFLLLRRVVDNGLLPDRV-TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD-- 243
++ L+ GLC RL +A +L SM +KG D V + L+ C GK +D
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMV----KKGISLDEVTFTALIDGHCKIGKAKDVC 507
Query: 244 ---------------------------------AMQILEKILRKGLKAPKSRRHRIDL-C 269
A +L K+++ GL P H I +
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL-VPSVVTHTILIEG 566
Query: 270 PCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE K L E + + G P++ +Y+ + L N GR+ E + +L M + G
Sbjct: 567 HCRAGETALSLKML--ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ Y + A K G +D A +++ MVK P +Y+ LL G N+A+
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFV-LSNTAIGAR 682
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-----PCVETYNV 443
L + E D C V + IR P + YN
Sbjct: 683 ALSSTGDLDARSLSSEEN----DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNF 738
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GLC G+ EA ++M+ PD ++ SS++ C
Sbjct: 739 LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYC 778
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 35/368 (9%)
Query: 140 RSCYGWEVKSRIQSLNLLMD-------------VLCQCRRSDL-------ALHVFQEMDF 179
+S Y +++ RIQ L +L+ ++ +C S+ AL E+ F
Sbjct: 73 QSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGF 132
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ YP Y L+ L +LN + + ++ R+ +G + YRT++ ALC G
Sbjct: 133 RLSYP---CYSTLLMCLA---KLNMG-FVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG 185
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPC---NDGEDIEGAKSLINEALIRGGIPSL 296
+Q A K+LR G + L C + GE + + E R P+
Sbjct: 186 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCR---PNS 242
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS + L GR+ E ++ EM KG PS Y + A GM D+A+++++E
Sbjct: 243 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 302
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
K VP V Y IL+ LC G A +KM K G T+ L++G C++
Sbjct: 303 MATKAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIITFNALINGYCKE 360
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G + A ++L M + P + TYN L+ GLC + K Y+A + L ++ LPD +
Sbjct: 361 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 420
Query: 477 SSLVASVC 484
+ LV C
Sbjct: 421 NILVDGFC 428
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G + ++I L + R+ + ++ M + F I + + G+ + LF
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+N+ + C+ +FN L + K+ KL A+ + L + + + + +L++ C+
Sbjct: 511 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM-LGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ L+L + + M GC P+ +Y I++ GLCN+ R+ EA +L+SM S G
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM----SSFGVSP 625
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ A G++ A QI+ +++ G + P S + L GA++L
Sbjct: 626 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ-PNSHIYSALLSGFVLSNTAIGARAL 684
Query: 284 ------------------------------------INEALIRGGIPSLASYSAMAIDLY 307
I + + + G+P+ Y+ + + L
Sbjct: 685 SSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLC 744
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
EGRI+E D++ +M G +P + + + K D LE + + ++ FVP+
Sbjct: 745 KEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM-KLVLDNKFVPSF 802
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
Y ++ GL + G A + + + G
Sbjct: 803 ASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 833
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 183/371 (49%), Gaps = 18/371 (4%)
Query: 117 SFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
++N +++ + + + L +A L L GW + + N L+ C+ + D+A +F
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGW--RPDAYTFNSLIVGYCRTNQVDVARDLFD 70
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+M +G D SY L++G C R++EA L M D+ +Y L+ L
Sbjct: 71 KMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM--------DQPDMHMYAALVKGL 122
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGI 293
C G+ ++ + +L ++ G + P +R + +D C + + E A+ ++ E +G
Sbjct: 123 CKAGRGEEGLLMLRRMKELGWR-PSTRAYAAVVDF-RCWERKAKE-AEEMLQEMFEKGLA 179
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + + +A+ EGR+ + +VL+ M+ +G P++ Y A + +G V +A+ +
Sbjct: 180 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMAL 239
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ + V G P YN+L++G C G+ A L+ M G +A+ TY L++ L
Sbjct: 240 LNKMRVCGVN-PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD-GLIADQYTYNALINAL 297
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+DGR +A + + + R P T+N LI GLC GK A +LE+M+S PD
Sbjct: 298 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDT 357
Query: 474 SVWSSLVASVC 484
+SS + +C
Sbjct: 358 YTYSSFIEHLC 368
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 191/425 (44%), Gaps = 12/425 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
YA++I E+ RI E E+ +M ++A ++ +AG+ E + + + +
Sbjct: 84 YAALIEGFCETGRIDEAVELFGEMDQPDMH----MYAALVKGLCKAGRGEEGLLMLRRMK 139
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T+++ ++ E K + A + L+ + + + + +++ C+ R
Sbjct: 140 ELGWRPSTRAYAAVVDFRCWERKAKEAEEM-LQEMFEKGLAPCVVTCTAVINAYCKEGRM 198
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V + M +GC P+ +Y+ L++G CN+ ++++A LL M R+ G D V
Sbjct: 199 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM--RVC--GVNPDAVT 254
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C G I+ A ++L + GL A + + + C DG + A SL +
Sbjct: 255 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR-TDQACSLFDSL 313
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
RG P+ +++++ L G++ K L++M + G P Y + + L K
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
E L I E M++ P+ Y I++ L N + +M GC + TY
Sbjct: 374 QEGLSFIGE-MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYT 431
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ C +GR EA VL EM YN L+ G SIG+ AV L++M S
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 491
Query: 468 AKLPD 472
A +P+
Sbjct: 492 ASVPN 496
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 192/498 (38%), Gaps = 62/498 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + YA+++ + E +E++ +M I Y + G++++A+
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLM 158
+ + + C ++N L++ E K+ A L +R C V + NLL+
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVC---GVNPDAVTYNLLI 259
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
C + A + + M+ G D+ +Y+ L+ LC D R ++A S+F +
Sbjct: 260 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC----SLFDSLET 315
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G + V + +L+ LC GK+ A + LEK++ G C E
Sbjct: 316 RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 375
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
G S I E L + PS +Y+ + L E + EM + G P +V Y +
Sbjct: 376 GL-SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 434
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS---- 394
A +G ++EA V+ E G V T+ YN L+ G G + AV LK+M+
Sbjct: 435 RAYCIEGRLNEAENVLMEMSKNGVTVDTM-AYNTLMDGHASIGQTDHAVSILKQMTSVAS 493
Query: 395 -----------------------------------------------KQVGCVANGETYG 407
K+ + N TY
Sbjct: 494 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 553
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++G DGR EA+ ++ M S + Y L+ C + +A + + MI
Sbjct: 554 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 613
Query: 468 AKLPDISVWSSLVASVCC 485
+P + + L++ + C
Sbjct: 614 GFIPHLMSYQHLLSGLIC 631
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/483 (19%), Positives = 189/483 (39%), Gaps = 58/483 (12%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++I + R+++ V++ MK C+ + ++ + G++++A++L +
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
++N L++ + +E+A L LR G + + + N L++ LC+ R+D
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNALINALCKDGRTD 304
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F ++ +G P+ +++ L+ GLC +++ A L M G D Y
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV----SAGCTPDTYTY 360
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+ + LC Q+ + + ++L+K +K P + + I + + E +
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVK-PSTVNYTIVIHKLLKERNYGLVARTWGEMV 419
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P + +Y+ EGR+ E + VL EM G + Y + G D
Sbjct: 420 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 479
Query: 349 EALEVIEEE--------------------------------------------------- 357
A+ ++++
Sbjct: 480 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 539
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K F+P Y+ +L+G + G + A + M K+ N + Y LV C+
Sbjct: 540 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM-KEDSISLNEDIYTALVTCFCKSK 598
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+L+A ++ M+ + P + +Y L+ GL G+ +A + PD VW
Sbjct: 599 RYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 658
Query: 478 SLV 480
++
Sbjct: 659 VII 661
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+M C + T++R Y G+LNEA ++ +S+ T ++NTL
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL-------- 468
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
MD ++D A+ + ++M P++ +Y
Sbjct: 469 ----------------------------MDGHASIGQTDHAVSILKQMTSVASVPNQFTY 500
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWR---ISQKGSGEDIV----------IYRTLLFALC 236
IL++ L R + + L + W+ ++ D++ Y ++L
Sbjct: 501 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 560
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ G+ ++A ++ + + + + C C ++ A L+ + G IP L
Sbjct: 561 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPHL 619
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SY + L EG+ + ++ R K + P ++++ + L K G D + E+I
Sbjct: 620 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 677
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ SE R E ++ MK DS + ++ + + ++ + +A L
Sbjct: 548 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 607
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL-NLLMDVLC 162
++ Q + S+ LL ++ E + + A +F+ S W+ S + + +++D L
Sbjct: 608 CSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNS--RWKDYSPDEIVWKVIIDGLI 665
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ SD++ + ++ C P ++Y +L + L
Sbjct: 666 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 207/457 (45%), Gaps = 44/457 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F I + +A L+ A L + + + CV +F L+ + K +++ A L +
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + + +++ LC+ + D A +FQ M+ + C P+ +++IL+ GLC +R
Sbjct: 246 VTGG-CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ EA L + R+ + G DI+ Y +L+ LC ++ +A Q+ + I G+ A +
Sbjct: 305 IEEARQL----YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + A + + + +G P LA+Y+++ ++ R VE ++++E
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEE 420
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG-------------------- 361
M +KGF P + A L LF+ + A+++ + +G
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Query: 362 -----------------TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
F P+ + L++ LC G + A L KMS++ G A
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSER-GFAAAVS 539
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y L+ GL R R+ EA++V E M+ P + T NV+I LCS K +A ++ M
Sbjct: 540 SYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 599
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
PDI ++L+ C + ++ RK LE+++
Sbjct: 600 SKLGCCPDIETCNTLIGGY-CKSGRADLARKLLEEMT 635
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 9/318 (2%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D+A+ + +EM G + + LMKGLC+ R+ EA +R K D++
Sbjct: 26 DIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE-----HFRAMAKDCAPDVMT 80
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ ALC GK +A +L +++ +G + C G + E A ++ +
Sbjct: 81 YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE-EQAFRVLEDV 139
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ RG S A++ + L N+ VE KVL + KGF P+++M+ + K
Sbjct: 140 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 199
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D A +++E + KG VP V + IL+ GLC A A L+KM GC N TY
Sbjct: 200 LDSAYKLLEVMIEKGC-VPNVFTFTILITGLCKANRVGEAQQLLEKMVTG-GCSPNVVTY 257
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++GLC+ G+ +A + + M R+ P V T+N+LI GLC + EA M
Sbjct: 258 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 317
Query: 467 QAKLPDISVWSSLVASVC 484
PDI ++SL+ +C
Sbjct: 318 TGCAPDIITYNSLIDGLC 335
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 184/437 (42%), Gaps = 42/437 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ IR ++ AG L+ A+ L + + TL+K + ++ A F
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF--R 68
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + L+ LC+ + D A + +EM +GC PD ++ L+ GLC
Sbjct: 69 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ-GKIQDAMQILEKILRKGLKAPK 260
+A +L + Q+G G + T++ LC++ ++ A ++L ++ KG P
Sbjct: 129 EEQAFRVLEDVI----QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF-TPT 183
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + +D++ A L+ + +G +P++ +++ + L R+ E ++L+
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV--------------------------- 353
+M T G P++V Y + L K G VD+A E+
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 354 -IEE------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
IEE M + P + YN L+ GLC + A + + + AN TY
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L G GR +A R+ ++ + + P + TY LI C + E V +EEM S
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423
Query: 467 QAKLPDISVWSSLVASV 483
+ P ++ S+++ +
Sbjct: 424 KGFPPRVNTLSAVLGGL 440
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 207/490 (42%), Gaps = 58/490 (11%)
Query: 1 MSVRWPRLLTPTYL--SQIIK---KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIG 53
+ V + TPT L + +I K K +A K+ + EK PN + +I
Sbjct: 172 LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF----TFTILIT 227
Query: 54 ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
L ++NR+ E ++++++M C ++T I + GQ+++A LF+ + + NC
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+ N L+ + K ++E A L+ R I + N L+D LC+ + D A +
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRM-RETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346
Query: 174 FQEMDFQGC-YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
FQ + G + +Y L G R+ +A + F + KG D+ Y +L+
Sbjct: 347 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI----FSMLVDKGFSPDLATYTSLI 402
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG- 291
C + + ++++E++ KG P+ L +G E A L + RG
Sbjct: 403 LEYCKTSRAVEVVELVEEMASKGFP-PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 461
Query: 292 ------------GI-------------------------PSLASYSAMAIDLYNEGRIVE 314
G+ PS ++ A+ L GR +
Sbjct: 462 TDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD 521
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++L +M +GF ++ Y L+ L + DEA +V E MV P + N+++
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA-MVSAGPAPEISTVNVVI 580
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
LC A A +++MSK +GC + ET L+ G C+ GR A ++LEEM
Sbjct: 581 SWLCSAAKVDDAYELVQRMSK-LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 639
Query: 435 WPCVETYNVL 444
P T+++L
Sbjct: 640 EPNDTTHDLL 649
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ Y + G +D A++++EE M F V+ L+KGLCDAG A+
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEE-MKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + M+K C + TY LV LC+ G+F EA +L EM+ R P T++ LI GL
Sbjct: 66 HFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G + +A LE++I + + + +++ +C
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 159
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+P+ +Y + + G + ++L+EM++ GF + V++ + L G V EALE
Sbjct: 6 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
M K P V Y L+ LC AG A L++M + GC + T+ L+DG
Sbjct: 66 HF-RAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIAR-GCAPDTVTFSTLIDG 122
Query: 413 LCRDGRFLEASRVLEEMLIR------------------------------------SYWP 436
LC+ G +A RVLE+++ R + P
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +N++I G C A LE MI + +P++ ++ L+ +C
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 230
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-- 106
++++G L E N ++ D M C ++ + ARA + N+A+++ + +
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVID 493
Query: 107 ---SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+FN + + + L++ + + + +A +L S G+ + + S N L+ L
Sbjct: 494 KRDRKFN--PSSSAVDALVESLCQVGRTDDAKQLLHKMSERGF--AAAVSSYNGLLSGLS 549
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +R D A VF+ M G P+ + ++++ LC+ ++++A Y + R+S+ G
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA----YELVQRMSKLGCC 605
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
DI TL+ C G+ A ++LE++ GL+ P H DL C
Sbjct: 606 PDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE-PNDTTH--DLLEC 651
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C+ N TYGIL+ G G A ++LEEM + + L++GLC G+ EA+
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
M PD+ +++LV ++C
Sbjct: 65 EHFRAMAKDCA-PDVMTYTALVHALC 89
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 213/483 (44%), Gaps = 31/483 (6%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD-- 80
+P +L F+ K N+R N Y ++ ILS E + ++Q+ D C+ KD
Sbjct: 81 NPTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRG 138
Query: 81 ------------------SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+VF ++ Y G A+ +F N+ + + +S N+LL
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+VK + AH ++ + + + ++++++ C+ + D A ++M+ G
Sbjct: 199 NNLVKNGETHTAHYVY-QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +YH L+ G + + A +L M S+KG ++V Y L+ C Q K+
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGVSRNVVTYTLLIKGYCKQCKMD 313
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L + + P R + + + C G+ I+ A L++E L G +L ++
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK-IDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G I E + V+ M P Y L ++G EA + ++ + +G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
PTV YN LLKGLC G A+ M K+ G + Y L+DGL + F
Sbjct: 433 -IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR-GVAPDEVGYSTLLDGLFKMENFEG 490
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
AS + +++L R + T+N +I GLC +GK EA ++M PD + +L+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 482 SVC 484
C
Sbjct: 551 GYC 553
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 202/493 (40%), Gaps = 41/493 (8%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + + Y +++ +E + D+M + E + T ++ R G ++A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ ++ + + ++TLL + K E A L+ KSRI + N ++
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTMIS 515
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A +F +M GC PD +Y L+ G C + +A + +M ++
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM----ERE 571
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
I +Y +L+ L ++ + +L ++ +GL + C +G ++
Sbjct: 572 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM-LDK 630
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL-------- 331
A S E G ++ S M LY GRI E + ++ +M GF+P
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690
Query: 332 ------------------------VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
++Y +A L K G VD+A +KG FVP
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVPDN 749
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y L+ G AGN A +M ++ G V N TY L++GLC+ A R+
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRR-GLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
++ + +P V TYN LI G C IG A ++MI + P + +S+L+ + C
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL-CKH 867
Query: 488 ADLNVCRKTLEQL 500
D+ K L Q+
Sbjct: 868 GDIERSMKLLNQM 880
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 170/385 (44%), Gaps = 13/385 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G++ EA +F + C ++ TL+ K S + A ++
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA--FKVKG 566
Query: 142 CYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
E + I+ N L+ L + RR + EM +G P+ +Y L+ G C +
Sbjct: 567 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L++A +S ++ +++ G +I+I T++ L G+I +A +++K++ G
Sbjct: 627 MLDKA----FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ D+ I+ ++E+ +P+ Y+ L G++ + +
Sbjct: 683 ECFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 738
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KGF P Y + G VDEA + +EM++ VP + YN L+ GLC +
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR-LRDEMLRRGLVPNIVTYNALINGLCKS 797
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
N A K+ Q G N TY L+DG C+ G A ++ ++M+ P V T
Sbjct: 798 ENVDRAQRLFHKL-HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMI 465
Y+ LI GLC G ++ L +MI
Sbjct: 857 YSALINGLCKHGDIERSMKLLNQMI 881
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 175/415 (42%), Gaps = 34/415 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +MI L + ++ E +E+ D+MK C + T I Y +A + +A + +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + +N+L+ + K +L E +L G + I + L+D C+
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG--LTPNIVTYGALIDGWCKEG 626
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----FWRISQKGS 221
D A + EM G + ++ GL R++EA L+ M F+ +
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686
Query: 222 GEDI------------------------VIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
DI ++Y + LC GK+ DA + + KG
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF- 745
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + + + +++ A L +E L RG +P++ +Y+A+ L + +
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ ++ KG +P++V Y + K G +D A + ++++M++ P+V Y+ L+ GL
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK-LKDKMIEEGISPSVVTYSALINGL 864
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
C G+ ++ L +M K G + Y LV G R G + ++ + M IR
Sbjct: 865 CKHGDIERSMKLLNQMIK-AGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 194/437 (44%), Gaps = 17/437 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ +L +S + + +EV + M F T + + +AG L ++ + + N
Sbjct: 245 VLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 304
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ K K+E A H RS G+ V S N L++ C+
Sbjct: 305 IEFSEVTYNILINGFSKSGKMEEARRFHGDMQRS--GFPVTP--YSFNPLIEGYCKQGLF 360
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A V EM G YP +Y+I ++ LC R+++A LL SM + D+V
Sbjct: 361 DEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM--------AAPDVVS 412
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ K +A + + L+ G P + + + ++EGA+ L E
Sbjct: 413 YNTLMHGYIKMRKFVEASLLFDD-LKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEM 471
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P + +Y+ + G + ++ DEM KG P Y + + G
Sbjct: 472 TSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDS 531
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++A + EE + + P + +YN+ + GLC GN A+ + +K+ + VG V + TY
Sbjct: 532 EKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR-VGLVPDHVTYT 590
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ G GRF A + +EML + P V TY VLI G G+ +A + EM +
Sbjct: 591 TVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKR 650
Query: 468 AKLPDISVWSSLVASVC 484
P++ ++L+ +C
Sbjct: 651 GVRPNVMTHNALLHGMC 667
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 170/385 (44%), Gaps = 17/385 (4%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V D+M S + IR G++++A L +++ + V S+NTL+ +
Sbjct: 366 VTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVV----SYNTLMHGYI 421
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K K A +LF + I + N L+D LC+ + A + +EM Q YPD
Sbjct: 422 KMRKFVEASLLF-DDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDV 480
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+KG + L+ AT + M +KG D Y T G + A +
Sbjct: 481 ITYTTLLKGFVKNGNLSMATEIYDEML----RKGIKPDGYAYTTRTVGELRLGDSEKAFR 536
Query: 247 ILEKILRKGLKAPKSRRH--RID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ E+++ + AP + RID LC + +E A + G +P +Y+ +
Sbjct: 537 LHEEMVAEDHHAPDLTIYNVRIDGLCKVGN---LEKAIEFQRKIFRVGLVPDHVTYTTVI 593
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+GR + DEM +K PS++ Y + K G +++A + EM K
Sbjct: 594 RGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQY-STEMKKRGV 652
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V +N LL G+C AGN A YL KM ++ G N +Y IL+ C ++ E
Sbjct: 653 RPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEE-GISPNKYSYTILISKHCDLDKWEEVV 711
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGL 448
++ +EML + P T+ L + L
Sbjct: 712 KLYKEMLDKEIEPDGYTHRALFKHL 736
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 176/445 (39%), Gaps = 15/445 (3%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
KI+ E K + N + Y +I S+S ++ E + M+ F I
Sbjct: 295 KIWLEMKRR--NIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIE 352
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
Y + G +EA + + T ++N ++ + + +++ A R
Sbjct: 353 GYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA-----RELLSSMAA 407
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ S N LM + R+ A +F ++ P +Y+ L+ GLC L A L
Sbjct: 408 PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRL 467
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M ++ D++ Y TLL G + A +I +++LRKG+K P +
Sbjct: 468 KEEMTSQLIYP----DVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIK-PDGYAYTTRT 522
Query: 269 CPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
D E A L E + P L Y+ L G + + + ++ G
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P V Y + + G A ++ +E M+ P+V Y +L+ G AG A
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYDE-MLSKRLSPSVITYFVLIHGHAKAGRLEQAF 641
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
Y +M K+ G N T+ L+ G+C+ G EA R L +M P +Y +LI
Sbjct: 642 QYSTEMKKR-GVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISK 700
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPD 472
C + K E V +EM+ + PD
Sbjct: 701 HCDLDKWEEVVKLYKEMLDKEIEPD 725
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK++RKG P R I L D + A+ + ++ G +P++ +++ M +
Sbjct: 227 FEKMIRKGF-LPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCF 285
Query: 308 NEGRIVEGDKVLDEMRTK--------------GFWPSLVMYEAK---------------- 337
G + DK+ EM+ + GF S M EA+
Sbjct: 286 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPY 345
Query: 338 -----LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ K G+ DEA V +E + G + PT YNI ++ LC+ G A L
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIY-PTTSTYNIYIRALCEFGRIDDARELLSS 404
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M+ + +Y L+ G + +F+EAS + +++ + P + TYN LI GLC G
Sbjct: 405 MA-----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESG 459
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A EEM SQ PD+ +++L+ N
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKN 493
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 205/440 (46%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++ L RI + EV+D+M C ++ + R+G +V +
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C T + N +L + ++ ++ A + LR + ++ I S N ++ LC
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEA-VGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + EM C P+ +++ L+ LC + +L M S+ G
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM----SEHGCTP 284
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E + A+ L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++E + +++ + G + ++L++M + G P ++ Y + K
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G++DEA+ +++ M P Y I+LKGLC AG A + +M +Q GC N
Sbjct: 404 EGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ-GCPPNP 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P+ ++SS+ ++
Sbjct: 522 MVNKGISPNTIIYSSIACAL 541
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 20/392 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++IG L + + EV+ QM C ++AT I + G L A + +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ +NT+LK + + + A L F + C +V + N+L+D C
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-----TFNILVDFFC 367
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q D + + ++M GC PD +Y ++ G C + ++EA LL SM S G
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----SSCGCK 423
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAK 281
+ V Y +L LC G+ DA +++ +++++G P + I+ C G +E A
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL-CKKGL-VEQAI 481
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + AL
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
++G V++ +++ + +K T + + V YN ++ LC + A+ + M GC+
Sbjct: 542 SREGRVNKVIQMFDN--IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCM 598
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
N TY +L+ GL +G EA +L E+ R
Sbjct: 599 PNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 194/431 (45%), Gaps = 10/431 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + E + E ++ ++ CE + ++ A + + L + + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNTL+ + + E H +L S +G R+ + ++D +C+ ++
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT--IIDGICKEGHLEV 304
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M G P+ Y+ ++KGLC+ R EA LL MF QK D V +
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFN 360
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C G + +++LE++L G + C +G I+ A L+
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL-IDEAVMLLKSMSS 419
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ SY+ + L + GR V+ ++++ +M +G P+ V + + L K G+V++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y +
Sbjct: 480 AIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSI 537
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
L R+GR + ++ + + + YN +I LC + A+ + M+S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 470 LPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 598 MPNESTYTMLI 608
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 8/439 (1%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P+Y ++ S V++ M C + G ++EAV L +
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
L+ F C S+N +LK + + L + + I + N L+ LC+
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ V +M GC PD Y ++ G+C + L A +L R+ G ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN----RMPSYGLKPNV 321
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T+L LC + ++A ++L ++ +K + + C +G ++ L+
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL-VDRVIELLE 380
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L G +P + +Y+ + EG I E +L M + G P+ V Y L L G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A E++ + M++ P +N L+ LC G A+ LK+M GC + +
Sbjct: 441 RWVDAEELMSQ-MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLIS 498
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++DGL + G+ EA +L M+ + P Y+ + L G+ + + + +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 466 SQAKLPDISVWSSLVASVC 484
D +++++++S+C
Sbjct: 559 DTTIRSDAVLYNAVISSLC 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC R AL V EM F+GC P YH++++ C + +L +M KG
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HAKG 176
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIE 278
D +L A+C+QG + +A+ +L K+ G +A + + LC D+E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
L++E + P++ +++ + L G +VL +M G P + MY +
Sbjct: 237 ---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-- 396
+ K+G ++ A E++ M P V YN +LKGLC A A L +M ++
Sbjct: 294 DGICKEGHLEVANEILNR-MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 --------------------------------VGCVANGETYGILVDGLCRDGRFLEASR 424
GC+ + TY +++G C++G EA
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+ M P +Y ++++GLCS G+ +A + +MI Q P+ +++L+ +C
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 43/319 (13%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ ++ +++GLC R+ +A +L M S KG +Y +L A C G ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEM----SFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++++LE + KG +D CN + + ++EA+ G + LA +
Sbjct: 165 SVRVLEAMHAKGCT--------LDTGNCNLVLNAICEQGCVDEAV--GLLRKLAFFGC-- 212
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
E IV + VL + W G V+E ++ EMV+
Sbjct: 213 -----EADIVSYNAVLKGLCMAKRW----------------GDVEELMD----EMVRVDC 247
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + +N L+ LC G L +MS+ GC + Y ++DG+C++G A+
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L M P V YN +++GLCS + EA L EM Q P V +++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF-QKDCPLDDVTFNILVDF 365
Query: 484 CCNTADLNVCRKTLEQLSS 502
C ++ + LEQ+ S
Sbjct: 366 FCQNGLVDRVIELLEQMLS 384
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ +LC G+ +A + L + + C G+ + +
Sbjct: 53 LIRSLCSAGRTAEAARALADAGDAAGVV---AYNAMVAGYCRAGQLAAARRLAAAVPV-- 107
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+ ++ + L GRI + +VLDEM KG P MY L A + G +
Sbjct: 108 --PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ V+E KG + T N++L +C+ G AV L+K++ GC A+ +Y ++
Sbjct: 166 VRVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVL 223
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC R+ + +++EM+ P + T+N LI LC G L +M
Sbjct: 224 KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
PDI ++++++ + C L V + L ++ S
Sbjct: 284 PDIRMYATIIDGI-CKEGHLEVANEILNRMPS 314
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 209/501 (41%), Gaps = 21/501 (4%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNG--PVY---ASMIGILSESNRIT 62
L+ TY II + L K EAK + + G P Y +++I I
Sbjct: 205 LVPNTYTYTIIT---AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E+ + D M + I + G++ +A + K + C +++F L+
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ +E + A + L + S +++ LC C+ LA + ++M F G
Sbjct: 322 EGYCREHNMGRA-LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ Y L+ G ++ R+ EA LL M S G DI Y ++ L GK++
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGM----SCSGVAPDIFCYNAIISCLSKAGKME 436
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A L +I +GLK L G+ E AK +E L G +P+ Y+ +
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK-YFDEMLDHGLMPNNPLYTVL 495
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ G ++E + + G P + A + L K+G V EAL+V E KG
Sbjct: 496 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG- 554
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP V Y+ L+ G C G A +M + G N Y LVDGLC+ G A
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + M + P TY+ +I G C EA EM S+ P V+++LV
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Query: 483 VCCNTAD----LNVCRKTLEQ 499
CC D +N+ R+ L++
Sbjct: 674 -CCKEGDMEKAMNLFREMLQK 693
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 196/454 (43%), Gaps = 11/454 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++ E +++ N + Y +MI L ++ +++++M + V++T
Sbjct: 333 ALELLDEMEKR--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I YA G++ EA L +S +N ++ + K K+E A +L G
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST-YLLEIQGRG 449
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + + + + A F EM G P+ Y +L+ G L EA
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA- 508
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+F + G D+ + L G++Q+A+++ ++ KGL +
Sbjct: 509 ---LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C GE +E A L +E ++G P++ Y+A+ L G I K+ D M KG
Sbjct: 566 ISGFCKQGE-VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K V EA + E KG P VYN L+ G C G+ A
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV-QPHSFVYNALVHGCCKEGDMEKA 683
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ ++M ++ A ++ L+DG C+ + EAS++ +EM+ + P TY +I
Sbjct: 684 MNLFREMLQK--GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C GK EA + +EM + + D ++SL+
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 190/460 (41%), Gaps = 16/460 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N P+Y +I ++ + E + + + I + G++ EA+ +F
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
L + V ++++L+ K+ ++E A L C + I N L+D LC+
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-IAPNIFIYNALVDGLCK 606
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A +F M +G PD +Y ++ G C + EA +S+F + KG
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA----FSLFHEMPSKGVQP 662
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID-LC-PCNDGEDIEGAK 281
+Y L+ C +G ++ AM + ++L+KG S ID C C I+ A
Sbjct: 663 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK----IQEAS 718
Query: 282 SLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L E + + +P +Y+ + ID + G++ E + + EM+ + V Y + +
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTV-IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 777
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K G E + E+ + KG P Y +++ C N V L+ G +
Sbjct: 778 YNKLGQSSEVFALFEKMVAKGV-KPDEVTYGLVIYAHCKEDN-LVEAFKLRDEVVGKGML 835
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
G + +L+ LC+ EAS++L+EM P + + L+R GK EA
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
E + S +PD + LV N D R ++QL
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNG-NLNDTDSEDARNLIKQL 934
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 149/380 (39%), Gaps = 75/380 (19%)
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------------FWR 215
+ M +G P+ +Y I+ GLC +R+NEA M F R
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 216 -------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS- 261
+ G +++ Y L+ LC GK++ A +IL+ ++ G K P S
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCK-PNSR 315
Query: 262 ----------RRHRI---------------------------DLCPCNDGEDIEGAKSLI 284
R H + LC C +D+ A L+
Sbjct: 316 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC---KDLSLANKLL 372
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ G P++ YS + + +EGRI E ++LD M G P + Y A ++ L K
Sbjct: 373 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 432
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G ++EA + E +G P + + G G A Y +M G + N
Sbjct: 433 GKMEEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH-GLMPNNP 490
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y +L++G + G +EA + + P V+T + I GL G+ EA+ E+
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ +PD+ +SSL++ C
Sbjct: 551 KEKGLVPDVFTYSSLISGFC 570
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 127/309 (41%), Gaps = 37/309 (11%)
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSM---------------FWRISQKGSGEDIVIYRTL 231
+S+ IL LCN A +L M FW + GS V++ L
Sbjct: 105 DSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSP--VVFDIL 162
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ + G + +A + K+ I L CN + G K L+
Sbjct: 163 IDSYKRMGMLDEAANVF--------FVAKNDSILISLIRCNSLRSM-GEKGLV------- 206
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P+ +Y+ + L R+ E +EM+ G P A + ++G +DE L
Sbjct: 207 --PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 264
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
I++ MV + YN+L+ GLC G A LK M +GC N T+ +L++
Sbjct: 265 R-IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIE 322
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G CR+ A +L+EM R+ P +Y +I GLC A LE+M P
Sbjct: 323 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382
Query: 472 DISVWSSLV 480
++ V+S+L+
Sbjct: 383 NVVVYSTLI 391
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 217/467 (46%), Gaps = 15/467 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N ++++I L R++E E++D+M + T + +G+ EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ C ++ +L M K + A L LR +K ++++D
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL-LRKMEERNIKLDAVKYSIIIDG 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A ++F EM+ +G + +Y+IL+ G CN R ++ LL M R
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR----K 328
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V + L+ + +GK+++A ++ ++++ +G+ AP + + ID C N +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENH---L 384
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A +++ + +G P++ +++ + RI +G ++ +M +G V Y
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E MV P + Y ILL GLCD G S A+ +K+ K
Sbjct: 445 IQGFCELGKLNVAKELFQE-MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + ++ P V+TYN++I GLC G EA
Sbjct: 504 MELDIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ +M PD ++ L+ + D K +E+L C
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAH-LGDGDATKSVKLIEELKRCG 608
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 206/461 (44%), Gaps = 66/461 (14%)
Query: 76 CECKDSVFAT---AIRTYARAG----QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
CE S F+ + R R+G + ++A+ LF+++ + F+ L + K
Sbjct: 42 CERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKT 101
Query: 129 SKLEAAHILFLRSCYGWEVKS---RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + L L C E+K + +L+++++ C+CR+ LA ++ G P+
Sbjct: 102 KQYD----LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++ L+ GLC + R++EA L+ R+ + G D++ TL+ LC GK +AM
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVD----RMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 246 QILEKILRKG---------------------------LKAPKSRRHRIDLCP-------- 270
+++K++ G L+ + R ++D
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G ++ A +L NE ++G ++ +Y+ + N GR +G K+L +M + P+
Sbjct: 274 CKHGS-LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAV 385
+V + + + K+G + EA E + +EM+ P Y L+ G C D N V
Sbjct: 333 VVTFSVLIDSFVKEGKLREA-EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+M K GC N T+ IL++G C+ R + + +M +R TYN LI
Sbjct: 392 DLMVSK------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G C +GK A +EM+S+ P+I + L+ +C N
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 14/288 (4%)
Query: 31 FKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EA+E + H G P Y S+I + N + + +++D M C+ F
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y +A ++++ + LF+ +S V T ++NTL++ + KL A LF +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF-QEMVSR 467
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V I + +L+D LC S+ AL +F++++ D Y+I++ G+CN ++++A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ +F + KG + Y ++ LC +G + +A + K+ G AP +
Sbjct: 528 ----WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HAPDGWTYN 582
Query: 266 IDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
I + DG+ + K + E L R G AS M ID+ ++GR+
Sbjct: 583 ILIRAHLGDGDATKSVKLI--EELKRCGFSVDASTIKMVIDMLSDGRL 628
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 194/455 (42%), Gaps = 25/455 (5%)
Query: 46 PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
P++A + +L S+ M + + + S FA + ++ AG+ +AV F
Sbjct: 101 PLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAF 160
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +F +NT+LK +V + A L+ R +R + N+LMD LC+
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNR-ATYNVLMDGLCK 219
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ AL +F EM +G P+ + Y +L+ LCN +++EA LL SM KG
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM----KDKGCLP 275
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V Y L LC G++ +A Q L +L+ G A + + + +
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
L R P + Y+ M GRI + LD M+ KGF P Y L L
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G ++ A + EM++ V I++ GLC G A+ +M + GC
Sbjct: 395 HGDLERA-HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEH-GCDPTV 452
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV--------------ETYNVLIRGLC 449
TY L+DG R+GR LE +R+L + P + E+ L+ +C
Sbjct: 453 MTYNALIDGFYREGR-LEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMC 511
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A L +I +PD+ +++L+ +C
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 196/444 (44%), Gaps = 26/444 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L + + ++ D+M ++ + + AG+++EAV L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++ C+ ++N L + K ++ EA L + G+ + ++ + L+D L
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG--LKGYSCLIDGLF 323
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q RR D ++ M + PD Y I+++G R+ +A L M +KG
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM----KKKGFV 379
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D Y T+L LCD G ++ A + ++L+ L S I +C ++ A
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL-VLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY-------- 334
+ +E G P++ +Y+A+ Y EGR+ E + +M G PSL +
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLFLRLTLGANQV 497
Query: 335 --EAKLAALFKD----GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
L L D G V +A +++ ++ VP V YN L+ GLC A N AV
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRS-IIDSGVVPDVVTYNTLINGLCKARNLDGAVR 556
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
K++ + G + TYG L+DGL R R +A + + +L P + YN ++R L
Sbjct: 557 LFKELQLK-GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615
Query: 449 CSIGKQYEAV-MWLEEMISQAKLP 471
C + K +A+ +WL+ + + P
Sbjct: 616 CRMKKLSQAINLWLDYLPKKYNFP 639
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 38/179 (21%)
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
Q+KG S + + + T I RA + N+A+ LF+N+ Q +N++++ + +
Sbjct: 562 QLKGISPD--EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619
Query: 130 KLEAAHIL---FLRSCYGWEVKSRI--------------------------------QSL 154
KL A L +L Y + V+S +
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPY 679
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH-LLYSM 212
+ + LCQ RR+D AL +F + G +L+ LC DR LN A +LY++
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYAL 738
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 20/440 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + + E + + +MK C F + I Y + G+L+E L + + +
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ K ++E A+ F + V + + + + +D C+ A
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYF-AAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F +M +G + +Y L+ G C RL++A LL M ++G ++V Y
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV----RQGVPLNVVTYTV 368
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPK------SRRHRIDLCPCNDGEDIEGAKSLI 284
L+ LC + K+ +A +L + + G++A + H ++ ++ E A L+
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN-------KNSEKALGLL 421
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E +G ++ Y A+ L N ++ E +L +M G P+ ++Y + A FK
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V EA+ ++++ + G F P V Y L+ GLC AG+ A+ + KM + +G N +
Sbjct: 482 GKVPEAIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKM-RDLGLDPNVQ 539
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y LVDGLC++G EA ++ EM+ + Y L+ G G ++A +M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599
Query: 465 ISQAKLPDISVWSSLVASVC 484
I D+ ++ ++ C
Sbjct: 600 IDSGLQLDLFCYTCFISGFC 619
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 24/400 (6%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEV 147
R+G+L LF+ L N +FN ++ + KE +L A LF R C
Sbjct: 171 RSGRLVR--RLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFSRMKEMGCL---- 220
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N L+D +C D + +EM GC D +Y+ L+ C R+ A
Sbjct: 221 -PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA-- 277
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
Y F + ++G ++V + T + A C +G +++AM++ ++ +G+ + +
Sbjct: 278 --YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G ++ A L++E ++R G+P ++ +Y+ + L E ++ E + VL M G
Sbjct: 336 DGTCKAGR-LDDAIVLLDE-MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ ++Y + F + ++AL ++ E KG + + +Y L++GLC+ A
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL-DISLYGALIQGLCNVHKLDEA 452
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L KM + G N Y ++D + G+ EA +L+++L + P V TY LI
Sbjct: 453 KSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GLC G EA+ +M P++ +++LV +C N
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND-----GEDIEGAK 281
+ TLL L D+G + DA++ + ++ + L+ P + R CN D G
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARV--RELRVPPNTR------TCNHILLRLARDRSG-- 173
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ + P++ +++ + L EG + E + M+ G P +V + + +
Sbjct: 174 RLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY 233
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G +DE +E + EEM + V YN L+ C G A Y M ++ G +A
Sbjct: 234 GKCGELDE-VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMA 291
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N T+ VD C++G EA ++ +M +R TY LI G C G+ +A++ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+EM+ Q ++ ++ LV +C
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLC 374
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 166/405 (40%), Gaps = 58/405 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +++ + + + E ++ QM+ + + I +AG+L++A+ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + ++ L+ + KE K+ EA +L + K+ +++ LL L
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME------KAGVRANELLYTTLI 405
Query: 163 QC----RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ S+ AL + EM +G D Y L++GLCN +L+EA LL M +
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM----DE 461
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG---- 274
G + +IY T++ A GK+ +A+ +L+KIL G + + I C DG
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-----NVITYCALIDGLCKA 516
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
I+ A S N+ G P++ +Y+A+ L G + E ++ +EM KG V+Y
Sbjct: 517 GSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 335 EAKLAALFKDG-----------MVDEALEV-----------------------IEEEMVK 360
A L K G M+D L++ + EM+
Sbjct: 577 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
P VYN L+ GN A+ +M + + + +T
Sbjct: 637 HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDT 681
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 16/301 (5%)
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R HIL++ L DR + R+ ++ ++ + ++ LC +G++ +A
Sbjct: 158 RTCNHILLR-LARDRS--------GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208
Query: 246 QILEKILRKG-LKAPKSRRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ ++ G L + ID C + +++E L+ E G + +Y+A+
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE---QLVEEMRRSGCKADVVTYNALI 265
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
GR+ M+ +G ++V + + A K+G+V EA+++ + V+G
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+ Y L+ G C AG A++ L +M +Q G N TY +LVDGLC++ + EA
Sbjct: 326 LNEF-TYTCLIDGTCKAGRLDDAIVLLDEMVRQ-GVPLNVVTYTVLVDGLCKERKVAEAE 383
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VL M Y LI G +A+ L EM ++ DIS++ +L+ +
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443
Query: 484 C 484
C
Sbjct: 444 C 444
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 9/215 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PNY +Y +M+ +S ++ E ++ ++ + + I +AG ++E
Sbjct: 466 PNY----IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+S F + Q++ L+ + K L A LF + ++ LL
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
L Q D A + +M G D Y + G CN + EA + M
Sbjct: 582 GYLKQGNLHD-AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH--- 637
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
G D +Y L+ G +++A+ + +++ R
Sbjct: 638 -GIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 185/392 (47%), Gaps = 10/392 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSL 154
L++A+S F L + F LL + K L + +G V + +L
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG--VPPNVYTL 103
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C R A V ++ G PD ++ L++GLC + ++ EA HL M
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI- 162
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+G ++V Y TL+ LC G A+++L + + + I C D
Sbjct: 163 ---DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR 219
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A +L ++ + +G P + +Y+++ L N +L++M P +V++
Sbjct: 220 QVTE-AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+G V EA E+++ + +G P V Y L+ G C AV M
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ G + +Y L++G C+ + +A + EEM + + P +TYN L+ GLC +G+
Sbjct: 338 RK-GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM+++ ++PD+ +S L+ S+C N
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKN 428
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 196/440 (44%), Gaps = 14/440 (3%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
KI K + P + ++I L +I E + D+M + + + T I
Sbjct: 125 KILKLGHQPDPT------TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 178
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+ G + A+ L +++ Q NC + +++ + K+ ++ A LF G +
Sbjct: 179 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF-SQMVGQGIS 237
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
I + L+ LC + +M PD + ++ LC + ++ EA +
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 297
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ M Q+G D+V Y TL+ C Q ++ +A+++ + ++RKG AP + +
Sbjct: 298 VDMMI----QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF-APDVISYTTLI 352
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
I+ A L E + IP +Y+ + L + GR+ + + EM +G
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P LV Y L +L K+ ++EA+ +++ + P ++VYNI++ G+C AG A
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKA-IEASNLNPDIQVYNIIIDGMCRAGELEAARD 471
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+S + G + TY I++ GLC+ G EA+++ EM P TYN + RG
Sbjct: 472 LFSNLSSK-GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530
Query: 449 CSIGKQYEAVMWLEEMISQA 468
+ A+ LEEM+++
Sbjct: 531 LQNNETLRAIQLLEEMLARG 550
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 189/422 (44%), Gaps = 10/422 (2%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ EA+ LF + ++ TL+ + K AA I LR
Sbjct: 136 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA-IRLLR 194
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + ++D LC+ R+ A ++F +M QG PD +Y L+ LCN
Sbjct: 195 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 254
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
T LL M ++ K D+VI+ T++ ALC +GK+ +A +I++ ++++G++
Sbjct: 255 EWKHVTTLLNQM---VNSK-ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 310
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVL 319
+ C E E K + + ++R G P + SY+ + +I + +
Sbjct: 311 VTYTTLMDGHCLQSEMDEAVK--VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+EM K + P Y + L G + +A+ + E + +G +P + Y+ILL LC
Sbjct: 369 EEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQ-MPDLVTYSILLDSLCK 427
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+ A+ LK + + + Y I++DG+CR G A + + + P V
Sbjct: 428 NRHLEEAMALLKAIEAS-NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVW 486
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
TYN++I GLC G EA EM PD ++++ N L + E
Sbjct: 487 TYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Query: 500 LS 501
L+
Sbjct: 547 LA 548
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 167/351 (47%), Gaps = 10/351 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ L+ LC + ALH+F +M +G P+ +Y L+ GLC + A LL SM
Sbjct: 137 TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 196
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
Q D+VIY +++ +LC ++ +A + +++ +G+ + CN
Sbjct: 197 ----EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 252
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
E + +L+N+ + +P + +S + L EG++ E +++D M +G P +V
Sbjct: 253 LCE-WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 311
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + +DEA++V + MV+ F P V Y L+ G C A+ ++
Sbjct: 312 TYTTLMDGHCLQSEMDEAVKVFDM-MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 370
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + + +TY L+ GLC GR +A + EM+ R P + TY++L+ LC
Sbjct: 371 MCRKE-WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK-N 428
Query: 453 KQYEAVMWLEEMISQAKL-PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ E M L + I + L PDI V++ ++ + C +L R LSS
Sbjct: 429 RHLEEAMALLKAIEASNLNPDIQVYNIIIDGM-CRAGELEAARDLFSNLSS 478
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 213/483 (44%), Gaps = 31/483 (6%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD-- 80
+P +L F+ K N+R N Y ++ ILS E + ++Q+ D C+ KD
Sbjct: 47 NPTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRG 104
Query: 81 ------------------SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+VF ++ Y G A+ +F N+ + + +S N+LL
Sbjct: 105 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 164
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+VK + AH ++ + + + ++++++ C+ + D A ++M+ G
Sbjct: 165 NNLVKNGETHTAHYVY-QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +YH L+ G + + A +L M S+KG ++V Y L+ C Q K+
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGVSRNVVTYTLLIKGYCKQCKMD 279
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L + + P R + + + C G+ I+ A L++E L G +L ++
Sbjct: 280 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK-IDDAVRLLDEMLRLGLKTNLFICNS 338
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G I E + V+ M P Y L ++G EA + ++ + +G
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
PTV YN LLKGLC G A+ M K+ G + Y L+DGL + F
Sbjct: 399 -IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR-GVAPDEVGYSTLLDGLFKMENFEG 456
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
AS + +++L R + T+N +I GLC +GK EA ++M PD + +L+
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516
Query: 482 SVC 484
C
Sbjct: 517 GYC 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 206/469 (43%), Gaps = 40/469 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I + +I + ++D+M + + + I Y + G+++EA + +
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+N + S+NTLL +E A L ++ + + N L+ LC+
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNL-CDKMLQEGIEPTVLTYNTLLKGLCRVGAF 419
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIV 226
D AL ++ M +G PD Y L+ GL A+ L W+ I +G + +
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILARGFTKSRI 474
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ T++ LC GK+ +A +I +K+ G +P +R + ++ G +
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGC-SPDGITYRTLIDGYCKASNV-GQAFKVKG 532
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
A+ R I PS+ Y+++ L+ R+VE +L EM +G P++V Y A + K+G
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592
Query: 346 MVDEALE--------------VIEEEMVKGTF-VPTVRVYNILLKGLCDAG--------- 381
M+D+A +I MV G + + + N+L++ + D G
Sbjct: 593 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 652
Query: 382 NSAVAVMYLKKMSKQVG------CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
S + ++K++ + + N Y I + GLC+ G+ +A R + ++ +
Sbjct: 653 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 712
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY LI G + G EA +EM+ + +P+I +++L+ +C
Sbjct: 713 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 761
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 190/445 (42%), Gaps = 11/445 (2%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + + Y +++ +E + D+M + E + T ++ R G ++A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ ++ + + ++TLL + K E A L+ KSRI + N ++
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTMIS 481
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A +F +M GC PD +Y L+ G C + +A + +M ++
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM----ERE 537
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
I +Y +L+ L ++ + +L ++ +GL + C +G ++
Sbjct: 538 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM-LDK 596
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S E G ++ S M LY GRI E + ++ +M GF+P +E L
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLK 653
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ + + + + ++E K +P VYNI + GLC G A + +S + G
Sbjct: 654 SDIRYAAIQKIADSLDES-CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK-GF 711
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
V + TY L+ G G EA R+ +EML R P + TYN LI GLC A
Sbjct: 712 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 771
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
++ + P++ +++L+ C
Sbjct: 772 LFHKLHQKGLFPNVVTYNTLIDGYC 796
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 13/359 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G++ EA +F + C ++ TL+ K S + A ++
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA--FKVKG 532
Query: 142 CYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
E + I+ N L+ L + RR + EM +G P+ +Y L+ G C +
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L++A +S ++ +++ G +I+I T++ L G+I +A +++K++ G
Sbjct: 593 MLDKA----FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ D+ I+ ++E+ +P+ Y+ L G++ + +
Sbjct: 649 ECFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 704
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KGF P Y + G VDEA + +EM++ VP + YN L+ GLC +
Sbjct: 705 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR-LRDEMLRRGLVPNIVTYNALINGLCKS 763
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
N A K+ Q G N TY L+DG C+ G A ++ ++M+ P ++
Sbjct: 764 ENVDRAQRLFHKL-HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 209/463 (45%), Gaps = 47/463 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ +L + ++ E ++++ MK + + F + Y + G L EA + ++
Sbjct: 86 YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ N + +++ TL+ + K+ K++ A L ++ + + N+L++ +C S
Sbjct: 146 RNNVLPDVRTYTTLIGGLCKDGKIDEAFRL-RDEMENLKLLPHVVTYNMLINGCFECSSS 204
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ EM+ +G P+ +Y++++K + +++ A + L M + G D V
Sbjct: 205 LKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM----EESGFSPDCVT 260
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ TL C G++ +A ++++++ RKGLK + I C + ++ A L++ A
Sbjct: 261 FNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE-RKLDDAYKLLSSA 319
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
RG SY + + + G+ DEM+ K PS++ Y + L + G
Sbjct: 320 SKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 348 DEALEVIEE----------------------------------EMVKGTFVPTVRVYNIL 373
D++++ E +MVK +F P + NIL
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435
Query: 374 LKGLCDAGNSAVAVMYLKK-MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
++GLC G A+ K +SK G + T+ ++ GLC +GRF EA +L EM +
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISK--GKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEK 493
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
P T+N ++ L G+ EA ++ ++ Q KL D ++
Sbjct: 494 KLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI 536
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 168/371 (45%), Gaps = 15/371 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHI--LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ NTL+K +V+ + ++ V+ + N+L+ C + A+ +
Sbjct: 12 TLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLI 71
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M C+PD SY+ ++ LC +LNEA LL M G + + L+
Sbjct: 72 GKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM----KNNGLFPNRNTFNILVSG 127
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI 293
C G +++A ++++ + R + P R + + C DG+ I+ A L +E +
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNV-LPDVRTYTTLIGGLCKDGK-IDEAFRLRDEMENLKLL 185
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + +Y+ + + ++G +++DEM KG P+ V Y + K+G +D A
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ +M + F P +N L G C AG + A + +MS++ G N T ++ L
Sbjct: 246 L-RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRK-GLKMNSVTLNTILHTL 303
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C + + +A ++L R Y+ +Y LI G +GK + W +EM + +P I
Sbjct: 304 CGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK---SXXW-DEMKEKEIIPSI 359
Query: 474 SVWSSLVASVC 484
+ +++ +C
Sbjct: 360 ITYGTMIGGLC 370
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ID+M+G + + ++ Y + G+++ A + + + + +FNTL
Sbjct: 209 ELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGY 268
Query: 126 VKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K +L EA ++ S G ++ S +LN ++ LC R+ D A + +G +
Sbjct: 269 CKAGRLSEAFRMMDEMSRKGLKMNS--VTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 326
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQD 243
D SY L+ G + S W + +K I+ Y T++ LC GK
Sbjct: 327 DEVSYGTLIMGYFKVGK---------SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQ 377
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ ++L GL ++ + I L C +G+ ++ A N+ + + P L + + +
Sbjct: 378 SIDKCNELLESGLVPDQTTYNTIILGYCREGQ-VDKAFHFRNKMVKKSFKPDLFTCNILV 436
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L EG + + K+ +KG V + ++ L ++G +EA +++ E M +
Sbjct: 437 RGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAE-MEEKKL 495
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ----------------------VGCVA 401
P +N +L L DAG A ++ + +Q
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDP 555
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
N + ++ LC G++ +A +++E + TY L+ GL
Sbjct: 556 NSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGL 602
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +MIG L S + + + +++ + + T I Y R GQ+++A +
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI---QSLNLLMDVLCQ 163
+ + + N L++ + E L+ A LF W K + + N ++ LC+
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKT----WISKGKAIDAVTFNTIISGLCE 476
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + A + EM+ + PD +++ ++ L + R+ EA + I ++G +
Sbjct: 477 EGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSG----IVEQGKLQ 532
Query: 224 DIVI-----------------------YRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
D I + + LC QGK +DAM ++++ +KG+ K
Sbjct: 533 DQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHK 592
Query: 261 S 261
S
Sbjct: 593 S 593
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 209/501 (41%), Gaps = 21/501 (4%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNG--PVY---ASMIGILSESNRIT 62
L+ TY II + L K EAK + + G P Y +++I I
Sbjct: 6 LVPNTYTYTIIT---AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E+ + D M + I + G++ +A + K + C +++F L+
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ +E + A + L + S +++ LC C+ LA + ++M F G
Sbjct: 123 EGYCREHNMGRA-LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ Y L+ G ++ R+ EA LL M S G DI Y ++ L GK++
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGM----SCSGVAPDIFCYNAIISCLSKAGKME 237
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A L +I +GLK L G+ E AK +E L G +P+ Y+ +
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK-YFDEMLDHGLMPNNPLYTVL 296
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ G ++E + + G P + A + L K+G V EAL+V E KG
Sbjct: 297 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG- 355
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP V Y+ L+ G C G A +M + G N Y LVDGLC+ G A
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRA 414
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + M + P TY+ +I G C EA EM S+ P V+++LV
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Query: 483 VCCNTAD----LNVCRKTLEQ 499
CC D +N+ R+ L++
Sbjct: 475 -CCKEGDMEKAMNLFREMLQK 494
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 197/457 (43%), Gaps = 13/457 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++ E +++ N + Y +MI L ++ +++++M + V++T
Sbjct: 134 ALELLDEMEKR--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I YA G++ EA L +S +N ++ + K K+E A +L G
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST-YLLEIQGRG 250
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + + + + A F EM G P+ Y +L+ G L EA
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA- 309
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+F + G D+ + L G++Q+A+++ ++ KGL +
Sbjct: 310 ---LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C GE +E A L +E ++G P++ Y+A+ L G I K+ D M KG
Sbjct: 367 ISGFCKQGE-VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K V EA + E KG P VYN L+ G C G+ A
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV-QPHSFVYNALVHGCCKEGDMEKA 484
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ ++M ++ A ++ L+DG C+ + EAS++ +EM+ + P TY +I
Sbjct: 485 MNLFREMLQK--GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPD--ISVWSSLVA 481
C GK EA + +EM + + D +++ +VA
Sbjct: 543 WHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 205/479 (42%), Gaps = 43/479 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ + I S++ ++TE + D+M + ++ I + +AG L EA+S+F++L
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
+ Q+ + + ++K +++ A +F E+K + + + + L+
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVF------SELKEKGLVPDVFTYSSLISGF 370
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A + EM +G P+ Y+ L+ GLC + A L F + +KG
Sbjct: 371 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL----FDGMPEKGL 426
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y T++ C + +A + ++ KG++ P S + + C D+E A
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ-PHSFVYNALVHGCCKEGDMEKAM 485
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEG-RIVEGDKVLDEMRTKGFWPSLVMY------ 334
+L E L +G +L S++ + ID Y + +I E ++ EM K P V Y
Sbjct: 486 NLFREMLQKGFATTL-SFNTL-IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 543
Query: 335 --------EAKLAALFKDG-----MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
EA L LFK+ +VD + E+ + KG P Y +++ C
Sbjct: 544 HCKAGKMEEANL--LFKEMQERNLIVDTVFALFEKMVAKGV-KPDEVTYGLVIYAHCKED 600
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
N V L+ G + G + +L+ LC+ EAS++L+EM P +
Sbjct: 601 N-LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ L+R GK EA E + S +PD + LV N D R ++QL
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN-LNDTDSEDARNLIKQL 717
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 148/377 (39%), Gaps = 75/377 (19%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------------FWR--- 215
M +G P+ +Y I+ GLC +R+NEA M F R
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 216 ----------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS---- 261
+ G +++ Y L+ LC GK++ A +IL+ ++ G K P S
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCK-PNSRTFC 119
Query: 262 -------RRHRI---------------------------DLCPCNDGEDIEGAKSLINEA 287
R H + LC C +D+ A L+ +
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC---KDLSLANKLLEKM 176
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P++ YS + + +EGRI E ++LD M G P + Y A ++ L K G +
Sbjct: 177 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 236
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+EA + E +G P + + G G A Y +M G + N Y
Sbjct: 237 EEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH-GLMPNNPLYT 294
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L++G + G +EA + + P V+T + I GL G+ EA+ E+ +
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354
Query: 468 AKLPDISVWSSLVASVC 484
+PD+ +SSL++ C
Sbjct: 355 GLVPDVFTYSSLISGFC 371
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 207/455 (45%), Gaps = 12/455 (2%)
Query: 33 EAKEKYP--NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
E KEK + N Y ++I L + N ++ ++D+M G VF I Y
Sbjct: 276 ELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGY 335
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+ G + A+ + + N + + +L++ K ++E A L +
Sbjct: 336 CKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA-LEEILSSGLSIH 394
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ ++ LC+ R A + M + P +L+ GLC D + EAT L
Sbjct: 395 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL-- 452
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
++R+ +KGS V L+ LC GK+ +A +I++++L +GL + + + L
Sbjct: 453 --WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
CN+G+ +EG L E RG P + +Y+ + L N G++ + K+ DE + G +
Sbjct: 511 CNEGK-VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + K +++ + E + K + ++ VYNI++K C GN A A+ L
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI-VYNIIIKAHCQNGNVAAALQLL 628
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ M K G + N TY L+ G+C G +A +++EM + P V Y LI G C
Sbjct: 629 ENM-KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 687
Query: 451 IGKQYEA-VMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ A WL EMIS P+ ++ ++ C
Sbjct: 688 LGQMDTAESTWL-EMISFNIHPNKFTYTVMIDGYC 721
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 193/468 (41%), Gaps = 79/468 (16%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + +A + + +F+ +S+ C + SF ++ + K K+E A LF++
Sbjct: 193 LSSLVKANEFEKCCEVFRVMSEGACPD-VFSFTNVINALCKGGKMENAIELFMKM-EKLG 250
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + N +++ LCQ R D A + ++M +G P+ ++Y L+ GL ++
Sbjct: 251 ISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVN 310
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG------KIQDAM--------------- 245
H+L M G ++V++ L+ C G KI+D M
Sbjct: 311 HILDEMI----GAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 366
Query: 246 --------------QILEKILRKGLK-------------APKSRRHRI----------DL 268
LE+IL GL K R H +
Sbjct: 367 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 426
Query: 269 CP------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P C DG+ +E A L L +G S + +A+ L G++ E
Sbjct: 427 RPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 485
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+++ EM +G + Y A + +G V+ + EEM K P + YN LL+G
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR-LREEMTKRGIQPDIYTYNFLLRG 544
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ G A+ + K G ++N TYGI+++G C+ R + + E+L +
Sbjct: 545 LCNVGKLDDAIKLWDEF-KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 603
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN++I+ C G A+ LE M S+ LP+ + +SSL+ VC
Sbjct: 604 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 20/362 (5%)
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K+ K A L+ R S++ S N L+ LC + A + +EM +G
Sbjct: 440 LCKDGKHLEATELWFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPM 498
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
DR +Y+ L+ G CN+ ++ L M +++G DI Y LL LC+ GK+ DA
Sbjct: 499 DRITYNALILGFCNEGKVEGCFRLREEM----TKRGIQPDIYTYNFLLRGLCNVGKLDDA 554
Query: 245 MQILEKILRKGLKAPKSRRHRIDL-----CPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++ ++ GL S H + C N ED+E +L NE L + + Y
Sbjct: 555 IKLWDEFKASGLI---SNIHTYGIMMEGYCKANRIEDVE---NLFNELLSKKMELNSIVY 608
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + G + ++L+ M++KG P+ Y + + + G+V++A +I+E M
Sbjct: 609 NIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE-MR 667
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K FVP V Y L+ G C G A +L+ +S + N TY +++DG C+ G
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH--PNKFTYTVMIDGYCKLGN 725
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A+ +L +M P V TYNVL G C A ++M ++ D +++
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 785
Query: 479 LV 480
LV
Sbjct: 786 LV 787
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 50/424 (11%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQS 153
AV +F L++ ++ N L +VK ++ E + C + V S + S
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFE-------KCCEVFRVMSEGACPDVFS 222
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM- 212
+++ LC+ + + A+ +F +M+ G P+ +Y+ ++ GLC + RL+ A L M
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 282
Query: 213 -----------------------FWRISQ-------KGSGEDIVIYRTLLFALCDQGKIQ 242
F +++ G ++V++ L+ C G I+
Sbjct: 283 VKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIE 342
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG-GIPSLASYSA 301
A++I + ++ K + + + C + IE A++ + E L G I YS
Sbjct: 343 GALKIKDVMISKNITPTSVTLYSLMQGFCKS-DQIEHAENALEEILSSGLSIHPDNCYSV 401
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L + R + M ++ F PS ++ + L KDG EA E+ + KG
Sbjct: 402 VHW-LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460
Query: 362 TFVPTVRVY-NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+ P +V N L+ GLC AG A +K+M ++ G + TY L+ G C +G+
Sbjct: 461 S--PASKVTSNALIHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVE 517
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
R+ EEM R P + TYN L+RGLC++GK +A+ +E + + +I + ++
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 577
Query: 481 ASVC 484
C
Sbjct: 578 EGYC 581
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 190/436 (43%), Gaps = 13/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ E ++D M C+ + + ++ +A+ + +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A R S YG++ + S ++ LC +
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT--VSYTTVLKGLCAAK 264
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + +F EM + C P+ ++ +L++ C + A +L M S G +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM----SGHGCAANT 320
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ ++ +C QG++ DA Q L + G +P + + L E E AK L+
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + + P+ +++ L +G I + ++++M G ++V Y A + G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD ALE+ K P Y LL GLC+A A L +M Q C N T
Sbjct: 440 RVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 494
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ +LV C+ G EA ++E+M+ P + TYN L+ G+ + EA+ L ++
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554
Query: 466 SQAKLPDISVWSSLVA 481
S PDI +SS++
Sbjct: 555 SNGVSPDIVTYSSIIG 570
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 19/413 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ IR G++ EA+SL ++ C ++ LL+ + K + +A +L
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G I + N++++ +C+ R D A + G PD SY ++KGLC +
Sbjct: 207 RAKG--CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R + L F + +K + V + L+ C G ++ A+Q+LE++ G A
Sbjct: 265 RWEDVEEL----FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C G ++ A +N G P SY+ + L R + ++L
Sbjct: 321 TLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P+ V + + L + G++++A +IE+ G V V YN L+ G C
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV-TYNALVNGFCVQ 438
Query: 381 G--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G +SA+ + Y + C N TY L+ GLC R A+ +L EML + P V
Sbjct: 439 GRVDSALELFY------SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNTAD 489
T+NVL+ C G EA+ +E+M+ P++ +++L+ + CN+ +
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 218/515 (42%), Gaps = 50/515 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K A+++ E + K N Y +I + R+ + +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK--GCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E ++++ + + T ++ A + + LF + + NC+ +F+ L++
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ +E A I L G + N++++ +C+ R D A M GC PD
Sbjct: 296 CRGGMVERA-IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY ++KGLC R +A LL M +K + V + T + LC +G I+ A
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMV----RKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI------------ 293
++E++ G + +I +L+N ++G +
Sbjct: 411 MLIEQMSEHGCEV-----------------NIVTYNALVNGFCVQGRVDSALELFYSMPC 453
Query: 294 -PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ +Y+ + L N R+ ++L EM K P++V + ++ + G++DEA+E
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-----TYG 407
++E+ M G P + YN LL G+ + NS A+ L G V+NG TY
Sbjct: 514 LVEQMMEHGC-TPNLITYNTLLDGITNDCNSEEALELLH------GLVSNGVSPDIVTYS 566
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ L R+ R EA ++ + P YN ++ LC A+ + M+S
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+P+ + +L+ + N L R L +L S
Sbjct: 627 GCMPNELTYITLIEGL-ANEDFLKETRDLLRELCS 660
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 183/408 (44%), Gaps = 21/408 (5%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
++F E EK N N + ++ + +V++QM G C ++ I
Sbjct: 271 ELFAEMMEK--NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYG 144
T + G++++A N+ + C T S+ T+LK + + + E A L ++C
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
EV + N + +LCQ + A + ++M GC + +Y+ L+ G C R++
Sbjct: 389 NEV-----TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L YSM + + + Y TLL LC+ ++ A ++L ++L+K +
Sbjct: 444 ALELFYSMPCK-------PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C G ++ A L+ + + G P+L +Y+ + + N+ E ++L + +
Sbjct: 497 VLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P +V Y + + L ++ V+EA+++ G P +YN +L LC N+
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTD 614
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
A+ + M GC+ N TY L++GL + E +L E+ R
Sbjct: 615 GAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 661
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 166/366 (45%), Gaps = 11/366 (3%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L+ ++ L A L R+ E L+ + LC+ R+ A V + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRN-LCRRGRTSDAARVLRAAE 105
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G D +Y+ L+ G C +L+ A L+ SM D Y ++ LCD+
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM-------PVAPDAYTYTPIIRGLCDR 158
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G++ +A+ +L+ +L +G + P + + L A +++E +G P++ +
Sbjct: 159 GRVGEALSLLDDMLHRGCQ-PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 217
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + + EGR+ + + L+ + + GF P V Y L L ++ E+ E M
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K +P +++L++ C G A+ L++MS GC AN I+++ +C+ GR
Sbjct: 278 EKNC-MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGR 335
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A + L M P +Y +++GLC + +A L+EM+ + P+ +++
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 479 LVASVC 484
+ +C
Sbjct: 396 FICILC 401
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 11/300 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K N N + + I IL + I + +I+QM CE +
Sbjct: 374 AKELLKEMVRK--NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G+++ A+ LF ++ C T ++ TLL + +L+AA L L +
Sbjct: 432 VNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAEL-LAEMLQKD 487
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+L+ CQ D A+ + ++M GC P+ +Y+ L+ G+ ND EA
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEAL 547
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL+ + G DIV Y +++ L + ++++A+++ + G++ ++I
Sbjct: 548 ELLHGLV----SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L C + +GA + G +P+ +Y + L NE + E +L E+ ++G
Sbjct: 604 LLALCKRC-NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A+L L + EA +++ +G P V + L++ LC G ++ A L+ ++
Sbjct: 48 ARLRRLIARDDLAEAARLVDRATSRGE-APDVYLCTKLIRNLCRRGRTSDAARVLRA-AE 105
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + Y LV G CR G+ A R++ M + P TY +IRGLC G+
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVG 162
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
EA+ L++M+ + P + ++ L+ +VC +T
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 217/507 (42%), Gaps = 39/507 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++ + L I + K T L ++K+ HN +I NR+
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSF--GIPHNTYTLNILINSFCHLNRLGFAF 109
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+ + + + F T IR G++ EA+ LF ++ ++ TL+ +
Sbjct: 110 SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 169
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K A I FLRS + + + ++D LC+ R+ AL +F +M +G P+
Sbjct: 170 CKVGNTSTA-IRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPN 228
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWR------------------------------ 215
+Y L+ GLC EA L Y+M R
Sbjct: 229 NFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVD 288
Query: 216 -ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ Q D+V Y +L+ C + ++ + + + ++RKG P + +
Sbjct: 289 VMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC-VPSVISYTTLINGYCKI 347
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++ A L E +G IP +Y+ + L + GR+ + + EM G P LV Y
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
L K+ + EA+ +++ +++GT + P + +Y+I++ G+C AG A K+
Sbjct: 408 RILFDYLCKNHRLAEAMVLLK--VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 465
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
S + G + TY I+++GLC+ G EAS++ EM P TYN++ RG +
Sbjct: 466 SSK-GLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNE 524
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLV 480
A+ +EM+S+ D+S + LV
Sbjct: 525 TLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 179/391 (45%), Gaps = 8/391 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++A+SLF + + F+ LL + + L+ + + + +LN
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLY-KQMDSFGIPHNTYTLN 93
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C R A V ++ G P ++ L++GLC + ++ EA L F +
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQL----FDK 149
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++ +G D++ Y TL+ LC G A++ L + ++ + I C D +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A SL ++ L +G P+ +YS++ L G E ++ M + P + +
Sbjct: 210 LTE-ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+GMV +A V++ M++ P V YN L+ G C V M +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDV-MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GCV + +Y L++G C+ +A + EEM + P TYN LI GLC +G+
Sbjct: 328 K-GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM+ ++PD+ + L +C N
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKN 417
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 183/420 (43%), Gaps = 9/420 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ + + R + +SL+K + F + T + N L+ ++L A + L
Sbjct: 57 FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV-LGDI 115
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + L+ LC + AL +F +M +G PD +Y L+ GLC
Sbjct: 116 LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNT 175
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A L SM Q+ +V+Y T++ +LC ++ +A+ + +L KG+
Sbjct: 176 STAIRFLRSM----EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C G E + L + R +P +++ + L EG +V+ V+D M
Sbjct: 232 YSSLIHGLCILGHWKEAIR-LFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P +V Y + + + + + V + + KG VP+V Y L+ G C
Sbjct: 291 IQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC-VPSVISYTTLINGYCKIQI 349
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ ++MS+Q G + + TY L+ GLC GR +A + EM++ P + TY
Sbjct: 350 MDKAMGLFEEMSQQ-GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 408
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+L LC + EA++ L+ + PDI ++ S+V C +L R +LSS
Sbjct: 409 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY-SIVMDGMCRAGELEAARDLFSKLSS 467
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 174/428 (40%), Gaps = 85/428 (19%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +LT L + K + TA++ + +++ N R VY+++I L + ++TE
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR--NCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ M + +++ I G EA+ LF + + +FNTL+ +
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA--LHVFQEMDFQGCY 183
KE + AH + + ++K + + N LMD C RS++ ++VF M +GC
Sbjct: 275 CKEGMVVKAHYV-VDVMIQSDLKPDVVTYNSLMD--GHCLRSEMGKTVNVFDTMVRKGCV 331
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P SY L+ G C + +++A +F +SQ+G D V Y TL+ LC G+++D
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAM----GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387
Query: 244 AMQILEKILRKGLKAPKSRRHRI------------------------DLCP--------- 270
A+ + +++ G + P +RI +L P
Sbjct: 388 AIALFHEMVVYG-QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446
Query: 271 ---CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL-------- 319
C GE +E A+ L ++ +G P + +Y+ M L +G + E K+
Sbjct: 447 DGMCRAGE-LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505
Query: 320 ---------------------------DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
EM ++GF + + L DG+ D++++
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL-DQSVK 564
Query: 353 VIEEEMVK 360
I E V+
Sbjct: 565 QILCEFVQ 572
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 192/437 (43%), Gaps = 45/437 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + NRI + V+D+M+ + I + G+L+ A+ + L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
NC ++ L++ + E ++ A + + +K + + N ++ +C+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEA-LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + + ++ +GC PD SY+IL++ L N + E L+ MF S+K ++V
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF---SEK-CDPNVVT 335
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC GKI++AM +L+ + KGL
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLT------------------------------ 365
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P SY + EGR+ + L+ M + G P +V Y LA L K+G
Sbjct: 366 ------PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETY 406
D+ALE+ + G P YN + L +G+ A+ M L+ MS G + TY
Sbjct: 420 DQALEIFGKLGEVGC-SPNSSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDEITY 476
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ LCR+G EA +L +M + P V TYN+++ G C + +A+ LE M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 467 QAKLPDISVWSSLVASV 483
P+ + ++ L+ +
Sbjct: 537 NGCRPNETTYTVLIEGI 553
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 12/326 (3%)
Query: 164 CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CR + +LH+ + M +G PD L+KG R + +A ++ I +K
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-----EILEKFG 154
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D+ Y L+ C +I DA ++L+++ K +P + + I + C+ G+ ++ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGK-LDLA 212
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++N+ L P++ +Y+ + EG + E K++DEM ++G P + Y +
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K+GMVD A E++ +KG P V YNILL+ L + G + KM + C
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCD 330
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LCRDG+ EA +L+ M + P +Y+ LI C G+ A+ +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
LE MIS LPDI +++++A++C N
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKN 416
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 7/319 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ L+ G C R+++AT +L R+ K D V Y ++ +LC +GK+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVL----DRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L ++L + P + I + ++ A L++E L RG P + +Y+ +
Sbjct: 212 ALKVLNQLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ EG + +++ + KG P ++ Y L AL G +E E + +M
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG-EKLMTKMFSEKC 329
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+IL+ LC G A M L K+ K+ G + +Y L+ CR+GR A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA-MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LE M+ P + YN ++ LC GK +A+ ++ P+ S ++++ +++
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 484 CCNTADLNVCRKTLEQLSS 502
+ + LE +S+
Sbjct: 449 WSSGDKIRALHMILEMMSN 467
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 203/448 (45%), Gaps = 17/448 (3%)
Query: 46 PVYASMIGILSESNRITEMKEVI---DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
P +S +LS +I +V +QM+ + +L E +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
F + + ++NTL+K + E ++ A LFLR + + L+ LC
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLGCTPDVVTYGTLIKGLC 185
Query: 163 QCRRSDLALHVFQEM--DFQ----GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++AL + QEM D C P+ +Y+I++ GLC R +EA L F +
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL----FEEM 241
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+G I+ Y +L+ C GK +++ ++L+++L +GL+ + + C +G+
Sbjct: 242 KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKV 301
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE AK L+ + G +P L +Y+++ G + ++ M +KG P ++ Y
Sbjct: 302 IE-AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K V+EA+++ E ++ G P V Y+ LLKG+ AG A M K
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGK-RPNVITYDSLLKGIFLAGKVDDAKKLFSVM-KA 418
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G N TYGI +DGLC++ EA ++ E+ ++ +E N LI GLC GK
Sbjct: 419 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 478
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A E++ ++ P++ ++ ++ C
Sbjct: 479 AWELFEKLSNEGHEPNVVTYTIMIHGFC 506
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 183/404 (45%), Gaps = 12/404 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILF 138
+ T I+ +++EA LF + + C ++ TL+K + + A H
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200
Query: 139 LRSCYGWEV--KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L +E+ K + + N+++D LC+ R D A +F+EM QG P SY+ L+ G
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + E+ LL M +G D+V + L+ LC +GK+ +A ++L ++ G+
Sbjct: 261 CCAGKWEESKRLLDEML----DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C G D+ A+ L +G P + SY+ + ++ E
Sbjct: 317 VPDLVTYNSLIEGFCMVG-DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K+ +EM G P+++ Y++ L +F G VD+A ++ G Y I L G
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG-IAENSYTYGIFLDG 434
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + M L K E L+DGLC+ G+ A + E++ + P
Sbjct: 435 LCK-NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 493
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V TY ++I G C G+ +A + +++M + PDI +++L+
Sbjct: 494 NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 537
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 49/339 (14%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
ALH F M P S++ L+ GL + ++ ++S++ ++ G D
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQ----VFSLYNQMRLSGLSSDRCTLN 108
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
LL LC+ ++++ ILR+G
Sbjct: 109 ILLNCLCNVNRLREGFAAFAGILRRGYS-------------------------------- 136
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P++ +Y+ + L E RI E ++ M+ G P +V Y + L G ++
Sbjct: 137 ----PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 192
Query: 350 ALEVIEEEMVKG------TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
AL+ + +EM+ P V YNI++ GLC G A ++M Q G + +
Sbjct: 193 ALK-LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ-GMIPSI 250
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+Y L+ G C G++ E+ R+L+EML + P + T+NVLI LC GK EA L
Sbjct: 251 ISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 310
Query: 464 MISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
MI +PD+ ++SL+ C DLN R+ + S
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCM-VGDLNSARELFVSMPS 348
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 186/404 (46%), Gaps = 18/404 (4%)
Query: 85 TAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+ +A+ K L+Q +N S+ TL+ + K A I LR
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRGA-IKLLRKID 191
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G K ++ + ++D LC+ + A +F EM +G D +Y L+ G C + +L
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M K ++ Y L+ ALC +GK+++A +L +L+ +K
Sbjct: 252 EAIGLLNEMVL----KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD---- 303
Query: 264 HRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I DG +++ A+ + N + G P + +Y+ + + E +
Sbjct: 304 -VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM K P +V Y + + L K G + ++I+E +G + Y+ L+ GLC
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI-TYSSLIDGLCK 421
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G+ A+ KM Q N T+ IL+DGLC+ GR +A V +++L + Y V
Sbjct: 422 NGHLDRAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYNV+I G C G EA+ L +M +P+ + +++ ++
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 195/400 (48%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGW 145
I + GQ+ S+ + + T + NTL+K + + +++ A H G+
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
++ S L++ +C+ + A+ + +++D + P+ E Y ++ LC + ++EA
Sbjct: 161 QLNQ--VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y +F ++ KG D+V Y TL++ C +GK+++A+ +L +++ K + P +
Sbjct: 219 ----YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN-PNVYTYN 273
Query: 266 IDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + C +G+ ++ AKS++ L P + +YS + + + + V + M
Sbjct: 274 ILVDALCKEGK-VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P + Y + K+ MVDEAL + +E M + VP + Y+ L+ GLC +G
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKE-MHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M + G A+ TY L+DGLC++G A + +M + P + T+ +L
Sbjct: 392 YVWDLIDEMRDR-GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC G+ +A ++++++ ++ ++ ++ C
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 22/391 (5%)
Query: 106 LSQFN---CVNWTQ---SFNTLLKEMVK----ESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+SQFN C+ T FN +L K + + +H L L+ ++ + +LN
Sbjct: 44 VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG-----IQPDLITLN 98
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C + V ++ +G PD + + L+KGLC ++ +A H +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF----HDK 154
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G + V Y TL+ +C G + A+++L KI + L P + + +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR-LTKPNVEMYSTIIDALCKYQ 213
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A L +E ++G + +YS + EG++ E +L+EM K P++ Y
Sbjct: 214 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYN 273
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA V+ M+K P V Y+ L+ G A MS
Sbjct: 274 ILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS- 331
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+G + TY IL++G C++ EA + +EM ++ P + TY+ LI GLC G+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++EM + + D+ +SSL+ +C N
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 49/394 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y+++I L + ++E + +M ++T I + G+L EA+
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--FLRSCYGWEVKSRIQSLNLLM 158
L + ++N L+ + KE K+ EA +L L++C VK + + + LM
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC----VKPDVITYSTLM 311
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D A HVF M G PD +Y IL+ G C ++ ++EA +L F + Q
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL----FKEMHQ 367
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
K IV Y +L+ LC G+I
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVW--------------------------------- 394
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
LI+E RG + +YS++ L G + + ++M+ + P++ + L
Sbjct: 395 ---DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K G + +A EV ++ + KG + V YN+++ G C G A+ L KM G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHL-NVYTYNVMINGHCKQGLLEEALTMLSKMEDN-G 509
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
C+ N T+ ++ L + +A ++L +M+ R
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 212/476 (44%), Gaps = 45/476 (9%)
Query: 7 RLLTPTYLSQIIKKQKS--PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
R+L+P + +++ Q A + F+ A ++ YRH V+ M+G+LS +
Sbjct: 87 RVLSPPQVRAVLRAQAQGDARAAFEFFRWADRQW-QYRHAPEVFDEMLGLLSRTRLHDPA 145
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ V+ M FA + +Y+RAG+L A+ + + + C N +
Sbjct: 146 RRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNV 205
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V +++ A + F V+ + + N L+ LC RR AL + M GC P
Sbjct: 206 LVVAGRVDKA-LGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPP 264
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ SY+ +M LC ++R++E LL +M + G D V Y L+ L G +A
Sbjct: 265 DKISYYTVMSFLCKEKRVSEVRSLLATMR---NDAGLLTDQVTYNMLIHVLAKHGHADEA 321
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ L+ + +R R+D YSA+
Sbjct: 322 LEF--------LRESEGKRFRVD----------------------------EVGYSAVVH 345
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
GR+ E +++ EM +K P +V Y A + + G +D+A +++ + M K
Sbjct: 346 SFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMM-KHMYKNGCK 404
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + + LL GLC G S+ A L K S + + TY +++ G R+G+ E+
Sbjct: 405 PNIVTHTALLNGLCKVGKSSEAWELLNK-SGEDWWTPSDITYSVVMHGFRREGKLKESCD 463
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V+ +ML + ++P N+LI LC GK EA ++E+ S+ ++ +++++
Sbjct: 464 VVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVI 519
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 21/323 (6%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE-ATHLLYSMFWRISQKGSGEDIVIY 228
A F+ D Q Y M GL + RL++ A ++ M R ++G + +
Sbjct: 109 AFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQ----F 164
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ + GK++ AM++L+ + G AP D+ CN ++ +++AL
Sbjct: 165 AHLMLSYSRAGKLRSAMRVLQLMQTDGC-AP-------DISICNVAVNVLVVAGRVDKAL 216
Query: 289 ------IRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
R G+ P + +Y+ + L + R+VE +++ M G P + Y ++ L
Sbjct: 217 GFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFL 276
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K+ V E ++ + YN+L+ L G++ A+ +L++ S+
Sbjct: 277 CKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRE-SEGKRFRV 335
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y +V C +GR EA ++ EM+ + P V TY+ ++ G C IG+ +A +
Sbjct: 336 DEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMM 395
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+ M P+I ++L+ +C
Sbjct: 396 KHMYKNGCKPNIVTHTALLNGLC 418
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 121/343 (35%), Gaps = 100/343 (29%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+T L ++ K AL+ +E++ K +R + Y++++ + R+ E KE++
Sbjct: 303 VTYNMLIHVLAKHGHADEALEFLRESEGK--RFRVDEVGYSAVVHSFCLNGRMAEAKEIV 360
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+M C ++ + + R G++++A + K++ + C + LL + K
Sbjct: 361 GEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKV 420
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQ----------------------------------SL 154
K A L +S W S I +
Sbjct: 421 GKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEI 480
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGC-------------------------------- 182
NLL+ LC+ + A ++ +GC
Sbjct: 481 NLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYL 540
Query: 183 ---YPDRESYHILMKGLCNDRRLNEATHLLYSMF---------------WRISQKGSGED 224
+PD +Y +++ L RL EAT L+ M R +KG+ E+
Sbjct: 541 SNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEE 600
Query: 225 IV--------------IYRTLLFALCDQGKIQDAMQILEKILR 253
+V +Y ++ LC GK+ +A +L K+LR
Sbjct: 601 LVDLLDKMLARQELKSVYNQVIEKLCAFGKLNEAYGLLSKVLR 643
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 210/501 (41%), Gaps = 21/501 (4%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNG--PVY---ASMIGILSESNRIT 62
L+ TY II + L K EAK + + G P Y +++I I
Sbjct: 294 LVPNTYTYTIIT---AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E+ + D M + I + G++ +A + K + C +++F L+
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ +E + A L V S + S +++ LC C+ LA + ++M F G
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAV-SYGAMINGLCHCKDLSLANKLLEKMTFSGL 469
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ Y IL+ ++ R+ EA LL M S G DI Y ++ L GK++
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGM----SCSGVAPDIFCYNAIISCLSKAGKME 525
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A L +I +GLK L G+ E AK +E L G +P+ Y+ +
Sbjct: 526 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK-YFDEMLDHGLMPNNPLYTVL 584
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ G ++E + + G P + A + L K+G V EAL+V E KG
Sbjct: 585 INGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG- 643
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP V Y+ L+ G C G A +M + G N Y LVDGLC+ G A
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRA 702
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + M + P TY+ +I G C EA EM S+ P V+++LV
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Query: 483 VCCNTAD----LNVCRKTLEQ 499
CC D +N+ R+ L++
Sbjct: 763 -CCKEGDMEKAMNLFREMLQK 782
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 196/454 (43%), Gaps = 11/454 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++ E +++ N + Y +MI L ++ +++++M + V++
Sbjct: 422 ALELLDEMEKR--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSIL 479
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I YA G++ EA L +S +N ++ + K K+E A +L G
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST-YLLEIQGRG 538
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K + + + + A F EM G P+ Y +L+ G L EA
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA- 597
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+F R+ G D+ + L G++Q+A+++ ++ KGL +
Sbjct: 598 ---LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C GE +E A L +E ++G P++ Y+A+ L G I K+ D M KG
Sbjct: 655 ISGFCKQGE-VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K V EA + E KG P VYN L+ G C G+ A
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV-QPHSFVYNALVHGCCKEGDMEKA 772
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ ++M ++ A ++ L+DG C+ + EAS++ +EM+ + P TY +I
Sbjct: 773 MNLFREMLQK--GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C GK EA + +EM + + D ++SL+
Sbjct: 831 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 191/460 (41%), Gaps = 16/460 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N P+Y +I ++ + E + ++ + I + G++ EA+ +F
Sbjct: 577 NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
L + V ++++L+ K+ ++E A L C + I N L+D LC+
Sbjct: 637 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-IAPNIFIYNALVDGLCK 695
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A +F M +G PD +Y ++ G C + EA +S+F + KG
Sbjct: 696 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA----FSLFHEMPSKGVQP 751
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID-LC-PCNDGEDIEGAK 281
+Y L+ C +G ++ AM + ++L+KG S ID C C I+ A
Sbjct: 752 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK----IQEAS 807
Query: 282 SLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L E + + +P +Y+ + ID + G++ E + + EM+ + V Y + +
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTV-IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 866
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K G E + E+ + KG P Y +++ C N V L+ G +
Sbjct: 867 YNKLGQSSEVFALFEKMVAKGV-KPDEVTYGLVIYAHCKEDN-LVEAFKLRDEVVGKGML 924
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
G + +L+ LC+ EAS++L+EM P + N L+R GK EA
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
E + S +PD + LV N D R ++QL
Sbjct: 985 FEGVKSLGLVPDTTTLIDLVNG-NLNDTDSEDARNLIKQL 1023
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 202/481 (41%), Gaps = 90/481 (18%)
Query: 82 VFATAIRTYARAGQLNEAVSLF---KN----LSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
VF I +Y R G L+EA ++F KN +S C N+LLK+++K +E
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC-------NSLLKDLLKCGMMELF 212
Query: 135 HILF---LRSCYGWEVKSRI------------------------QSLN-------LLMDV 160
++ L + G++V + + LN L+++
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------- 212
+CQ D A+ + + M +G P+ +Y I+ GLC +R+NEA M
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
Query: 213 ----------FWR-------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
F R + G +++ Y L+ LC GK++ A +IL+
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ G K P SR C +G ++ A L++E R +PS SY AM
Sbjct: 393 GMVTLGCK-PNSRT----FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING 447
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + + +K+L++M G P++V+Y + A +G ++EA +++ G P
Sbjct: 448 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV-AP 506
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ YN ++ L AG A YL ++ + G + T+G + G + G+ EA++
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEAAKY 565
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+EML P Y VLI G G EA+ + + LPD+ S+ + +
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625
Query: 486 N 486
N
Sbjct: 626 N 626
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 136/352 (38%), Gaps = 69/352 (19%)
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+++ + + ++ + LL +W SQ G + + + L LC+ A +L ++
Sbjct: 73 VIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQM 132
Query: 252 LRKGLKAPKSRRHRIDLCPC---NDGEDIEGAKSLINEALI----RGG------------ 292
+R P S +D N G G+ ++ + LI R G
Sbjct: 133 IR----TPYSSSSILDSVLFWFRNYG----GSSPVVFDILIDSYKRMGMLDEAANVFFVA 184
Query: 293 -----IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ SL +++ DL G + KV + M + Y + AL K G +
Sbjct: 185 KNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDL 244
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A V+ E KG P +Y+++++G+C G+ AV LK+ + G V N TY
Sbjct: 245 RGAKRVLIEMDEKG-LNPNEFIYSLVIEGMCQVGDIDEAV-ELKRSMGEKGLVPNTYTYT 302
Query: 408 ILVDGLCRDGRFLEASRVLEEM----LIRSYWPC-------------------------- 437
I+ GLCR R EA EEM L Y C
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362
Query: 438 -----VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TYNVLI GLC GK +A L+ M++ P+ + L+ C
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 161/331 (48%), Gaps = 9/331 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N ++D C+ +R+D A + M +G P+ ++++++ GLC D RL E + +L
Sbjct: 18 VVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLV 77
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M S+KG D V Y TL+ C +G A+ + +++R GL +
Sbjct: 78 EM----SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G ++ A ++ +RG P+ +Y+ + +G + E +VL+EM GF PS
Sbjct: 134 CKAG-NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MY 389
+V Y A + G ++EA+ ++++ + KG +P V Y+ ++ G A M
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGV-LPDVVSYSTIISGFARNQELDRAFQMK 251
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
++ + K V + + TY L+ GLC R EA + +EML P TY LI C
Sbjct: 252 VEMIGKSV--LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G +A+ +EMI + LPD ++ L+
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 187/388 (48%), Gaps = 9/388 (2%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
+ FK + + C+ ++NT++ K + + A FLRS ++ + + N+++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEA-FGFLRSMGLKGLEPNLITFNMII 60
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ LC+ R V EM +G PD +Y+ L+ G C + ++A L M +
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV----R 116
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G ++V Y +L+ ++C G + AM+ +++ +GL P R + + ++
Sbjct: 117 NGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGL-CPNERTYTTIINGFAQQGLLD 175
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A ++NE G IPS+ +Y+A+ GR+ E +L +M KG P +V Y +
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ ++ +D A + ++ EM+ + +P Y+ L++GLC+ A ++M +
Sbjct: 236 SGFARNQELDRAFQ-MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML-TIK 293
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ TY L++ C++G +A + +EM+ + + P TYNVLI GL + EA
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCN 486
L ++ +P +++L+ + CCN
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIEN-CCN 380
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 163/324 (50%), Gaps = 10/324 (3%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+ L F+EM+ GC P+ +Y+ ++ G C +R +EA L SM KG +++ +
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSM----GLKGLEPNLITF 56
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
++ LC G++++ ++L ++ RKG + + + C +G + +++ +
Sbjct: 57 NMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL--VLHAEM 114
Query: 289 IRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+R G+ P++ +Y+++ + G + + D+M +G P+ Y + + G++
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA V+ EM + F+P++ YN L+ G C G A+ L+ M + G + + +Y
Sbjct: 175 DEAYRVL-NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK-GVLPDVVSYS 232
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ G R+ A ++ EM+ +S P TY+ LI+GLC + EA +EM++
Sbjct: 233 TIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292
Query: 468 AKLPDISVWSSLVASVCCNTADLN 491
PD +++L+ + C DLN
Sbjct: 293 KLPPDEFTYTTLINAY-CKEGDLN 315
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 206/494 (41%), Gaps = 29/494 (5%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L+ FKE + PN Y +MI + R E + M E F
Sbjct: 2 GLRFFKEMERNGCLPNV----VTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFN 57
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
I R G+L E + +S+ V ++NTL+ KE A +L
Sbjct: 58 MIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN 117
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + + L++ +C+ + A+ F +M +G P+ +Y ++ G L+E
Sbjct: 118 G-LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDE 176
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A Y + +++ G IV Y L+ C G++++A+ +L+ ++ KG+ P +
Sbjct: 177 A----YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV-LPDVVSY 231
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ ++++ A + E + + +P +YS++ L + R+ E + EM T
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT 291
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
P Y + A K+G +++AL + +EM++ F+P YN+L+ GL S
Sbjct: 292 IKLPPDEFTYTTLINAYCKEGDLNKALH-LHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVLEEM 429
A L K+ + + TY L++ G C G EA +V E M
Sbjct: 351 EARRLLLKLFYD-DSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM 409
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ +++ P YNV+I G C IG +A +EM+ +P +LV ++ D
Sbjct: 410 INKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMD 469
Query: 490 LNVCRKTLEQLSSC 503
+ + L SC
Sbjct: 470 GELNEVIGDILRSC 483
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 8/392 (2%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+ ++A LF + Q + F +L + K +K + LF + + S
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF-HKMENLGISHDLYSF 653
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+L+ C+C R LAL + +M G P + L+ G C R EA L+ SM
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-- 711
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++ G ++VIY T++ LC + +A++I + +KG+ A + + CN G
Sbjct: 712 --AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ A+ L+ + + R P++ ++A+ EG ++E + EM + P+++ Y
Sbjct: 770 RWTDAAR-LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + G + +A + + + KG F P V YN L+ G C + + +M+
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q G V + TY L+ G C+ G+ A +V M+ P + TYN+L+ LC+ GK
Sbjct: 888 HQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A++ +E++ DI ++ ++ +C N
Sbjct: 947 EKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 182/404 (45%), Gaps = 8/404 (1%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + + LF + + SF L+ + S+ A + L
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA-LALLGKM 676
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ I +L L++ CQ R A+ + M G P+ Y+ ++ GLC +R L
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDL 736
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N A + Y M +KG D V Y TL+ LC+ G+ DA ++L ++++ +
Sbjct: 737 NNALEIFYGM----EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ +G +E AK+L E + R P++ +Y+++ +GR+ + + D M
Sbjct: 793 FTALIDTFVKEGNLLE-AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+KG +P +V Y + K V++ +++ E +G V YN L+ G C AG
Sbjct: 852 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG-LVGDAFTYNTLIHGYCQAGK 910
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VA +M G + TY IL+D LC +G+ +A ++E++ + TYN
Sbjct: 911 LNVAQKVFNRMV-DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYN 969
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++I+G+C K EA + + D + ++++ +C N
Sbjct: 970 IIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 9/358 (2%)
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+ E A LFL + S + L+ + RR + ++ Q+M+ G D S+
Sbjct: 45 RFEDALDLFLEMVQSQPLPS-VVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSF 103
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
IL+ C RL+ A +L M + G IV + +LL C + +I DA ++
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMM----KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS-LASYSAMAIDLYN 308
+++ G + + + C C +G D+ A L+NE +G + + L +Y+ + L
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNG-DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G + ++L +M + P + + A + A K G +DEA E + ++M++ + P
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE-LYKQMLQSSIGPNTV 277
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+ GLC G A M+ + GC N TY L++G C+ R + ++ +
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASK-GCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
M TYN LI G C +GK A M+S PDI L+ +C N
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 184/406 (45%), Gaps = 10/406 (2%)
Query: 81 SVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
S + +RT + + + +A+ LF + Q + F LL + + E I F
Sbjct: 30 SGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETV-IYFS 88
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + + S +L+ C+C R LAL + +M G P ++ L+ G C
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLR 148
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKA 258
R+++A L+ SM + G ++V+Y TL+ LC G + A+++L ++ +KG L A
Sbjct: 149 NRIHDAFSLVASMV----KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAA 204
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + C GE + A+ ++ + R P + +++A+ +G + E ++
Sbjct: 205 DLVTYNTLLTGLCYSGEWRQAAR-ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQEL 263
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+M P+ V Y + + L G + A + + KG F P V YN L+ G C
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF-PNVVTYNTLINGFC 322
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ + ++M ++ G V + TY L+ G C+ G+ A + M+ P +
Sbjct: 323 KSRRVEDGMKLFQRMYRE-GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDI 381
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ +L+ GLC G+ A++ +M S K I ++ ++ +C
Sbjct: 382 ITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLC 427
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 165/398 (41%), Gaps = 43/398 (10%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
S++ + NR E ++D M E ++ T I + LN A+ +F + +
Sbjct: 689 GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
V ++NTL+ + + A L LR ++ + L+D +
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARL-LRDMVKRKIDPNVIFFTALIDTFVKEGNLL 807
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A ++++EM + +P+ +Y+ L+ G C RL +A H MF + KG D+V Y
Sbjct: 808 EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKH----MFDLMVSKGCFPDVVTY 863
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ C +++D M++ ++ +GL + +A
Sbjct: 864 NTLITGFCKSKRVEDGMKLFCEMTHQGL---------------------------VGDAF 896
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+Y+ + G++ KV + M G P +V Y L L +G ++
Sbjct: 897 ---------TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+AL V+ E++ K + YNI+++G+C A + ++++ G + Y
Sbjct: 948 KAL-VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK-GVKLDAIAYIT 1005
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ GLCR+G EA ++ M + P Y+ +R
Sbjct: 1006 MISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/539 (21%), Positives = 207/539 (38%), Gaps = 71/539 (13%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L KQ + A +++K+ + + N Y S+I L R+ K
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQS--SIGPNTVTYNSLINGLCMHGRLYHAK 296
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ D M C + T I + ++ ++ + + LF+ + + V T ++NTL+
Sbjct: 297 KTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ KL A +F + SC V I + +L+ LC A+ F +M Y
Sbjct: 357 CQVGKLRVAKDIFSWMVSC---GVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY 413
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
+Y+I++ GLC ++ EA + +F R+ +G D Y ++ LC G ++
Sbjct: 414 LGIVAYNIMIHGLCKADKVEEA----WELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469
Query: 244 AMQILEKILRKG------------------------LKAPKSRR---------------- 263
A ++ ++ G + PK RR
Sbjct: 470 ADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTT 529
Query: 264 ---HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID------------LYN 308
+ L P ++G L RG P S+S + L +
Sbjct: 530 LWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRS 589
Query: 309 EGRIVEGDKVLD---EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
E ++ D EM PS+V + L A+ K D + + +M
Sbjct: 590 ELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF-HKMENLGISH 648
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ + IL+ C ++A+ L KM K +G + T G L++G C+ RF EA +
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMK-LGFQPSIVTLGSLLNGFCQGNRFQEAVSL 707
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ M P V YN +I GLC A+ M + + D +++L++ +C
Sbjct: 708 VDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLC 766
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 135/373 (36%), Gaps = 75/373 (20%)
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + AL +F EM P + L+ + N RR + M G D+
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQM----ELFGISHDL 100
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ L+ C ++ A+ IL K+++ G
Sbjct: 101 YSFTILIHCFCRCSRLSLALSILGKMMKLGYD---------------------------- 132
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
PS+ ++ ++ RI + ++ M G+ P++V+Y + L K+G
Sbjct: 133 --------PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNG 184
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK---------- 395
V+ ALE++ E KG + YN LL GLC +G A L+ M+K
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244
Query: 396 ------------------------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
Q N TY L++GLC GR A + + M
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+ +P V TYN LI G C + + + + M + + D +++L+ C L
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY-CQVGKLR 363
Query: 492 VCRKTLEQLSSCS 504
V + + SC
Sbjct: 364 VAKDIFSWMVSCG 376
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 154/360 (42%), Gaps = 11/360 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S++ NRI + ++ M E V+ T I + G +N A+ L +
Sbjct: 137 TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196
Query: 107 SQFNCVNWT-QSFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++NTLL + + +AA IL R + + + L+D +
Sbjct: 197 EKKGRLAADLVTYNTLLTGLCYSGEWRQAARIL--RDMTKRRINPDVFTFTALIDAFVKQ 254
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D A ++++M P+ +Y+ L+ GLC RL A F ++ KG +
Sbjct: 255 GNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK----KTFDLMASKGCFPN 310
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V Y TL+ C +++D M++ +++ R+GL + + C G+ + AK +
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK-LRVAKDIF 369
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ + G P + ++ + L G I ++MR+ + +V Y + L K
Sbjct: 370 SWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKA 429
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
V+EA E+ V+G P R Y I++ GLC G A ++M K+ G + E
Sbjct: 430 DKVEEAWELFCRLPVEGV-KPDARTYTIMILGLCKNGPRREADELFRRM-KEDGIICQAE 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEA--KEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++ T L K+ + L A ++KE + +PN Y S+I R+ +
Sbjct: 788 PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL----TYNSLINGFCIQGRLGD 843
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
K + D M C + T I + ++ ++ + + LF ++ V ++NTL+
Sbjct: 844 AKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIH 903
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ KL A +F R V I + N+L+D LC + + AL + +++
Sbjct: 904 GYCQAGKLNVAQKVFNRMV-DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
D +Y+I+++G+C + ++ EA + +F +++KG D + Y T++ LC G ++
Sbjct: 963 VDIITYNIIIQGMCRNDKVKEA----WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRRE 1018
Query: 244 AMQILEKILRKGLKAPKSR 262
A ++ ++ G P R
Sbjct: 1019 ADKLCTRMKEDGF-MPSER 1036
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 205/440 (46%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++ L RI + EV+D+M C ++ + R+G +V +
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C T + N +L + ++ ++ A + LR + ++ I S N ++ LC
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEA-VGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + EM C P+ +++ L+ LC + +L M S+ G
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM----SEHGCTP 284
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E + A+ L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++E + +++ + G + ++L++M + G P ++ Y + K
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G++DEA+ +++ M P Y I+LKGLC AG A + +M +Q GC N
Sbjct: 404 EGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ-GCPPNP 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P+ ++SS+ ++
Sbjct: 522 MVNKGISPNTIIYSSIACAL 541
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 20/392 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++IG L + + EV+ QM C ++AT I + G L A + +
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +NT+LK + + + A L F + C +V + N+L+D CQ
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-----TFNILVDFFCQ 368
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + ++M GC PD +Y ++ G C + ++EA LL SM S G
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----SSCGCKP 424
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKS 282
+ V Y +L LC G+ DA +++ +++++G P + I+ C G +E A
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL-CKKGL-VEQAIE 482
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + AL
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++G V++ +++ + +K T + + V YN ++ LC + A+ + M GC+
Sbjct: 543 REGRVNKVIQMFDN--IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMP 599
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
N TY +L+ GL +G EA +L E+ R
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 194/431 (45%), Gaps = 10/431 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + E + E ++ ++ CE + ++ A + + L + + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNTL+ + + E H +L S +G R+ + ++D +C+ ++
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT--IIDGICKEGHLEV 304
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M G P+ Y+ ++KGLC+ R EA LL MF QK D V +
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFN 360
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C G + +++LE++L G + C +G I+ A L+
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL-IDEAVMLLKSMSS 419
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ SY+ + L + GR V+ ++++ +M +G P+ V + + L K G+V++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y +
Sbjct: 480 AIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSI 537
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
L R+GR + ++ + + + YN +I LC + A+ + M+S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 470 LPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 598 MPNESTYTMLI 608
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 8/439 (1%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P+Y ++ S V++ M C + G ++EAV L +
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
L+ F C S+N +LK + + L + + I + N L+ LC+
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ V +M GC PD Y ++ G+C + L A +L R+ G ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN----RMPSYGLKPNV 321
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T+L LC + ++A ++L ++ +K + + C +G ++ L+
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL-VDRVIELLE 380
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L G +P + +Y+ + EG I E +L M + G P+ V Y L L G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A E++ + M++ P +N L+ LC G A+ LK+M GC + +
Sbjct: 441 RWVDAEELMSQ-MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLIS 498
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++DGL + G+ EA +L M+ + P Y+ + L G+ + + + +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 466 SQAKLPDISVWSSLVASVC 484
D +++++++S+C
Sbjct: 559 DTTIRSDAVLYNAVISSLC 577
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC R AL V EM F+GC P YH++++ C + +L +M KG
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH----AKG 176
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIE 278
D +L A+C+QG + +A+ +L K+ G +A + + LC D+E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
L++E + P++ +++ + L G +VL +M G P + MY +
Sbjct: 237 ---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-- 396
+ K+G ++ A E++ M P V YN +LKGLC A A L +M ++
Sbjct: 294 DGICKEGHLEVANEILNR-MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 --------------------------------VGCVANGETYGILVDGLCRDGRFLEASR 424
GC+ + TY +++G C++G EA
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+ M P +Y ++++GLCS G+ +A + +MI Q P+ +++L+ +C
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 43/319 (13%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ ++ +++GLC R+ +A +L M S KG +Y +L A C G ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEM----SFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++++LE + KG +D CN + + ++EA+ G + LA +
Sbjct: 165 SVRVLEAMHAKGCT--------LDTGNCNLVLNAICEQGCVDEAV--GLLRKLAFFGC-- 212
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
E IV + VL + W G V+E ++ EMV+
Sbjct: 213 -----EADIVSYNAVLKGLCMAKRW----------------GDVEELMD----EMVRVDC 247
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + +N L+ LC G L +MS+ GC + Y ++DG+C++G A+
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L M P V YN +++GLCS + EA L EM Q P V +++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF-QKDCPLDDVTFNILVDF 365
Query: 484 CCNTADLNVCRKTLEQLSS 502
C ++ + LEQ+ S
Sbjct: 366 FCQNGLVDRVIELLEQMLS 384
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ +LC G+ +A + L + + C G+ + +
Sbjct: 53 LIRSLCSAGRTAEAARALADAGDAAGVV---AYNAMVAGYCRAGQLAAARRLAAAVPV-- 107
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+ ++ + L GRI + +VLDEM KG P MY L A + G +
Sbjct: 108 --PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ V+E KG + T N++L +C+ G AV L+K++ GC A+ +Y ++
Sbjct: 166 VRVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVL 223
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC R+ + +++EM+ P + T+N LI LC G L +M
Sbjct: 224 KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
PDI ++++++ + C L V + L ++ S
Sbjct: 284 PDIRMYATIIDGI-CKEGHLEVANEILNRMPS 314
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 205/440 (46%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++ L RI + EV+D+M C ++ + R+G +V +
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C T + N +L + ++ ++ A + LR + ++ I S N ++ LC
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEA-VGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + EM C P+ +++ L+ LC + +L M S+ G
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM----SEHGCTP 284
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E + A+ L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++E + +++ + G + ++L++M + G P ++ Y + K
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G++DEA+ +++ M P Y I+LKGLC AG A + +M +Q GC N
Sbjct: 404 EGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ-GCPPNP 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P+ ++SS+ ++
Sbjct: 522 MVNKGISPNTIIYSSIACAL 541
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 20/392 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++IG L + + EV+ QM C ++AT I + G L A + +
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +NT+LK + + + A L F + C +V + N+L+D CQ
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-----TFNILVDFFCQ 368
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + ++M GC PD +Y ++ G C + ++EA LL SM S G
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----SSCGCKP 424
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKS 282
+ V Y +L LC G+ DA +++ +++++G P + I+ C G +E A
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL-CKKGL-VEQAIE 482
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + AL
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++G V++ +++ + +K T + + V YN ++ LC + A+ + M GC+
Sbjct: 543 REGRVNKVIQMFDN--IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMP 599
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
N TY +L+ GL +G EA +L E+ R
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 194/431 (45%), Gaps = 10/431 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + E + E ++ ++ CE + ++ A + + L + + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNTL+ + + E H +L S +G R+ + ++D +C+ ++
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT--IIDGICKEGHLEV 304
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M G P+ Y+ ++KGLC+ R EA LL MF QK D V +
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF----QKDCPLDDVTFN 360
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C G + +++LE++L G + C +G I+ A L+
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL-IDEAVMLLKSMSS 419
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ SY+ + L + GR V+ ++++ +M +G P+ V + + L K G+V++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y +
Sbjct: 480 AIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSI 537
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
L R+GR + ++ + + + YN +I LC + A+ + M+S
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597
Query: 470 LPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 598 MPNESTYTMLI 608
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 8/439 (1%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P+Y ++ S V++ M C + G ++EAV L +
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
L+ F C S+N +LK + + L + + I + N L+ LC+
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ V +M GC PD Y ++ G+C + L A +L R+ G ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN----RMPSYGLKPNV 321
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y T+L LC + ++A ++L ++ +K + + C +G ++ L+
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL-VDRVIELLE 380
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L G +P + +Y+ + EG I E +L M + G P+ V Y L L G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+A E++ + M++ P +N L+ LC G A+ LK+M GC + +
Sbjct: 441 RWVDAEELMSQ-MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLIS 498
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++DGL + G+ EA +L M+ + P Y+ + L G+ + + + +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 466 SQAKLPDISVWSSLVASVC 484
D +++++++S+C
Sbjct: 559 DTTIRSDAVLYNAVISSLC 577
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC R AL V EM F+GC P YH++++ C + +L +M KG
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH----AKG 176
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIE 278
D +L A+C+QG + +A+ +L K+ G +A + + LC D+E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
L++E + P++ +++ + L G +VL +M G P + MY +
Sbjct: 237 ---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-- 396
+ K+G ++ A E++ M P V YN +LKGLC A A L +M ++
Sbjct: 294 DGICKEGHLEVANEILNR-MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 --------------------------------VGCVANGETYGILVDGLCRDGRFLEASR 424
GC+ + TY +++G C++G EA
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+ M P +Y ++++GLCS G+ +A + +MI Q P+ +++L+ +C
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 43/319 (13%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ ++ +++GLC R+ +A +L M S KG +Y +L A C G ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEM----SFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++++LE + KG +D CN + + ++EA+ G + LA +
Sbjct: 165 SVRVLEAMHAKGCT--------LDTGNCNLVLNAICEQGCVDEAV--GLLRKLAFFGC-- 212
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
E IV + VL + W G V+E ++ EMV+
Sbjct: 213 -----EADIVSYNAVLKGLCMAKRW----------------GDVEELMD----EMVRVDC 247
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + +N L+ LC G L +MS+ GC + Y ++DG+C++G A+
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L M P V YN +++GLCS + EA L EM Q P V +++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF-QKDCPLDDVTFNILVDF 365
Query: 484 CCNTADLNVCRKTLEQLSS 502
C ++ + LEQ+ S
Sbjct: 366 FCQNGLVDRVIELLEQMLS 384
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ +LC G+ +A + L + + C G+ + +
Sbjct: 53 LIRSLCSAGRTAEAARALADAGDAAGVV---AYNAMVAGYCRAGQLAAARRLAAAVPV-- 107
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+ ++ + L GRI + +VLDEM KG P MY L A + G +
Sbjct: 108 --PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ V+E KG + T N++L +C+ G AV L+K++ GC A+ +Y ++
Sbjct: 166 VRVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVL 223
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC R+ + +++EM+ P + T+N LI LC G L +M
Sbjct: 224 KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
PDI ++++++ + C L V + L ++ S
Sbjct: 284 PDIRMYATIIDGI-CKEGHLEVANEILNRMPS 314
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 199/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K + A + L ++++ + N ++D LC+ R D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLA-LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 333
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMV 392
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P + +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 453 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 510
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 571 PLPNSGTYNTLI 582
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 198/434 (45%), Gaps = 37/434 (8%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + V+ ++N L+ + S++ A L +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 148 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 202 LNEATHLLYSMFWR---------------ISQKGSGE----------------DIVIYRT 230
+EA L+ M R + ++G + D+VI+ T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ +LC + DA+ + +++ KG++ + C C+ G A L+++ + +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSDASQLLSDMIEK 324
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+L +++A+ EG+ VE +K+ D+M + P + Y + + +D+A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ E + K F P V YN L+KG C + ++MS + G V + TY L+
Sbjct: 385 KQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLI 442
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GL DG A +V ++M+ P + TY++L+ GLC+ GK +A+ + M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 471 PDISVWSSLVASVC 484
DI ++++++ +C
Sbjct: 503 LDIYIYTTMIEGMC 516
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 175/393 (44%), Gaps = 49/393 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++A+ LF + + + FN LL + K K + I E+ + +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTY 123
Query: 155 NLLMDVLCQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS LAL + +M G P + L+ G C+ +R+++A L+ M
Sbjct: 124 NILIN--CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D + + TL+ L K +A+ ++++++++G +
Sbjct: 182 V----EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--------------- 222
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
P+L +Y + L G +L++M +V
Sbjct: 223 ---------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
++ + +L K VD+AL + +E KG P V Y+ L+ LC G + A L
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 393 M-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M K++ N T+ L+D ++G+F+EA ++ ++M+ RS P + TYN L+ G C
Sbjct: 321 MIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +A E M+S+ PD+ +++L+ C
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 31 FKEAKEKYPNY--RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F EA++ Y + R P Y S++ +R+ + K++ + M C + T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I+ + ++ ++ + LF+ +S V T ++ TL++ + + + A +F +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF-KQMVSD 464
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V I + ++L+D LC + + AL VF M D Y +++G+C ++++
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ +F +S KG ++V Y T++ LC + +Q+A +L+K+ G
Sbjct: 525 ----WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 178/391 (45%), Gaps = 8/391 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G+ +AV LF ++ C ++NT++ + K + AA L L+
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL-LKK 223
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + L+D LC+ R + AL +F M +G PD +Y L++GLC R
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA+ LL M + DIV + L+ C +GK+ +A+ +L+ + G++ P
Sbjct: 284 WKEASALLNEM----TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVE-PNV 338
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + D+ A+ L + + +G P++ SY+ + RI E ++ +E
Sbjct: 339 VTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNE 398
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P+ V Y + + G + EA ++ G +P + Y+ILL G C G
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGN-LPDLFTYSILLDGFCKQG 457
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + M + N Y ILV +C+ G +A ++ E+ ++ P V+ Y
Sbjct: 458 YLGKAFRLFRAM-QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLY 516
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+I GLC G EA+ M + PD
Sbjct: 517 TTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 172/405 (42%), Gaps = 31/405 (7%)
Query: 97 NEAVSLFKN----LSQFNCVNWTQ------SFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
N+A S F+N L+ FN + + F LL +VK + I +
Sbjct: 64 NDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVG 123
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I +L++ M+ CQ +R DL V ++ G P ++ L+ GLC +A
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAV 183
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L F + KG D+ Y T++ LC G+ A +L+K+ G + +
Sbjct: 184 EL----FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL 239
Query: 267 DLCPCNDGEDIEGAKSLINEAL-------IRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
C D L+NEAL +G P + +Y+++ L R E +L
Sbjct: 240 IDSLCRD--------RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALL 291
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+EM + P +V + + K+G V EAL V++ M + P V Y+ L+ G
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT-MTEMGVEPNVVTYSSLMYGY-S 349
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
V L + GC N +Y IL++G C+ R EA ++ EM+ + P
Sbjct: 350 LWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNV 409
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+YN LI G C +GK EA M + LPD+ +S L+ C
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 7/250 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L K+ AL + K E N Y+S++ S + E +
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM--GVEPNVVTYSSLMYGYSLWTDVVEAR 358
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M C+ + I Y +A +++EA+ LF + S+NTL+
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL A LF C + + + ++L+D C+ A +F+ M P+
Sbjct: 419 CQLGKLREAQDLFRNMCTNGNLPD-LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y IL+ +C +A L +F +G + +Y T++ LC +G + +A+
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFV----QGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 246 QILEKILRKG 255
+ + G
Sbjct: 534 EAFRNMEADG 543
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 34/199 (17%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I ++ RI E ++ ++M + + T I + + G+L EA LF+N+
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCY------------------GWEV 147
+ +++ LL K+ L A LF ++S Y G
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495
Query: 148 KSR--------------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+R +Q +++ LC+ D AL F+ M+ GC PD SY++++
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555
Query: 194 KGLCNDRRLNEATHLLYSM 212
+GL + + A L+ M
Sbjct: 556 RGLLQHKDESRALLLVGEM 574
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 20/388 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++++IG L + + EV QM C ++AT I + +L A + +
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +NTLLK + + E A L F + C +V + N+L+D LCQ
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDV-----TFNILVDFLCQ 369
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + V ++M GC PD +Y ++ G C + ++EA LL SM + G
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM----AACGCRP 425
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKS 282
+ V Y +L LC + DA +++ +++++G P + I+ C G +E A
Sbjct: 426 NTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL-CKKGL-VEQAIE 483
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G E ++L+ M KG P+ ++Y + +AL
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+G +++ +++ E ++ T V + V YN ++ LC G + A+ +L M GCV
Sbjct: 544 GEGRINKVIQMFEN--IQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS-GCVP 600
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEM 429
N TY IL+ GL +G EA +L E+
Sbjct: 601 NESTYTILIRGLASEGFVKEAQEILTEL 628
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 11/442 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L RI + V+D M C ++ + RA AV +
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++L C + N +L+ + + ++ A L + + + S N ++ LC
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR + +EM GC P+ ++ L+ LC + L E H +++ ++++ G
Sbjct: 230 ARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNG-LFERVHEVHA---QMAEHGCAP 285
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAK 281
D+ +Y T++ +C + +++ A IL ++ GL + + LC + E+ EG
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG-- 343
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ E + +++ + L G + +VL++M G P ++ Y +
Sbjct: 344 -LLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K+G++DEA+ ++ G TV Y I+LKGLC A A + +M +Q GC
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVS-YTIVLKGLCSAERWVDAEELMSQMIQQ-GCPP 460
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL G EA+ L
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Query: 462 EEMISQAKLPDISVWSSLVASV 483
M+ + P+ ++SS+ +++
Sbjct: 521 NVMVKKGMSPNTIIYSSIASAL 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 186/413 (45%), Gaps = 10/413 (2%)
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
D + CE + +R A + L + + C +F+TL+ + +
Sbjct: 206 DLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRN 265
Query: 129 SKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
E H + + +G R+ + ++D +C+ R ++A + M G P+
Sbjct: 266 GLFERVHEVHAQMAEHGCAPDVRMYAT--IIDGVCKEERLEVARGILNRMPSYGLSPNVV 323
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y+ L+KGLC+ R EA LL MF K D V + L+ LC G + +++
Sbjct: 324 CYNTLLKGLCSADRWEEAEGLLAEMF----DKDCPLDDVTFNILVDFLCQNGLVDRVIEV 379
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
LE++L G + C +G I+ A L+ G P+ SY+ + L
Sbjct: 380 LEQMLEHGCMPDVITYTTVINGFCKEGL-IDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ R V+ ++++ +M +G P+ V + + L K G+V++A+E++++ +V G P +
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS-PDL 497
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ ++ GL AGN+ A+ L M K+ G N Y + L +GR + ++ E
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKK-GMSPNTIIYSSIASALSGEGRINKVIQMFE 556
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + YN +I LC G+ A+ +L M+S +P+ S ++ L+
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 141/331 (42%), Gaps = 12/331 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC R AL V +M +GC P YH+ ++ C A +L + R
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGR- 175
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
G D+ +L A+CDQG + +A+++L +L P + L
Sbjct: 176 ---GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ L+ E + G P++ ++S + L G +V +M G P + MY
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYAT 292
Query: 337 KLAALFKDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ + K+ E LEV I M P V YN LLKGLC A A L +M
Sbjct: 293 IIDGVCKE----ERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ C + T+ ILVD LC++G VLE+ML P V TY +I G C G
Sbjct: 349 FDK-DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EAVM L M + P+ ++ ++ +C
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 169/399 (42%), Gaps = 44/399 (11%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R G++ +A+++ ++++ C ++ L+ + S A + LR +G
Sbjct: 118 VRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGA-VGVLRDLHGRG 176
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + NL++ +C D A+ + +++ GC PD SY+ +++GLC RR
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L+ M G +IV + TL+ LC G + ++ ++ G
Sbjct: 237 QDLMEEMV----AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA-------- 284
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + Y+ + + E R+ +L+ M +
Sbjct: 285 ----------------------------PDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y L L +EA ++ E K + V +NIL+ LC G
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDV-TFNILVDFLCQNGLVDR 375
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L++M + GC+ + TY +++G C++G EA +L M P +Y +++
Sbjct: 376 VIEVLEQMLEH-GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+GLCS + +A + +MI Q P+ +++L+ +C
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 473
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 10/263 (3%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ ALC +G+I DA+ +L+ + R+G AP + + L GA ++ +
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGC-APTPPMYHVTLEAACRASGFRGAVGVLRDL 172
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL-DEMRTKGFWPSLVMYEAKLAALFKD-- 344
RG + + + + + ++G + E ++L D + + G P +V Y A L L
Sbjct: 173 HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232
Query: 345 -GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G V + +E EMV P + ++ L+ LC G +M++ GC +
Sbjct: 233 WGHVQDLME----EMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH-GCAPDV 287
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y ++DG+C++ R A +L M P V YN L++GLCS + EA L E
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M + D ++ LV +C N
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQN 370
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 170/338 (50%), Gaps = 13/338 (3%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + D +L+ Q M +G PD L+KG N +++ +A ++ I +K
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-----EILEKHG 142
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D+ Y ++ C ++ A ++L+++ ++G + P + I + C G ++ A
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFE-PDVVTYNILIGNFCGRGR-LDLA 200
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++++ L P++ +Y+ + +G I E K+LDEM ++G P Y +
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K+GM+D A E + + K V V YNILL+ L + G + M + GC
Sbjct: 261 MCKEGMLDRAFEFLSR-ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK-GCE 318
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY L+ LCRDG+ EA VL+ M ++ P +Y+ LI LC GK A+ +
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF 378
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN-TAD--LNVCRK 495
L++MIS LPDI ++S++AS+C N AD LN+ K
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 179/370 (48%), Gaps = 11/370 (2%)
Query: 117 SFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
++N ++ K +++ A+ +L G+E + + N+L+ C R DLAL V
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFE--PDVVTYNILIGNFCGRGRLDLALRVMD 205
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
++ C P +Y IL++ ++EA LL M R G D Y ++ +
Sbjct: 206 QLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSR----GLRPDRYTYNVVVNGM 261
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C +G + A + L +I + G A S + + N+G+ E + L+++ L++G P+
Sbjct: 262 CKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK-WEYGEKLMSDMLVKGCEPN 320
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+YS + L +G+I E VL M+ K P Y+ ++AL ++G VD A+E ++
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ M+ G +P + YN +L LC GN+ A+ +K+ +VGC N +Y L L
Sbjct: 381 D-MISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG-EVGCPPNAGSYNTLFGALWS 438
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDIS 474
G + A ++ EML P TYN LI LC G +A+ L +M K P +
Sbjct: 439 SGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVI 498
Query: 475 VWSSLVASVC 484
+++++ +C
Sbjct: 499 SYNTVLLGLC 508
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 200/447 (44%), Gaps = 49/447 (10%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
+H P Y ++I +++R+ +V+D+MK E + I + G+L+
Sbjct: 140 KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+ + L + NC ++ L++ + + +
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGI--------------------------- 232
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D A+ + EM +G PDR +Y++++ G+C + L+ A + RIS+
Sbjct: 233 ---------DEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRA----FEFLSRISK 279
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G + Y LL L ++GK + +++ +L KG + + C DG+ I+
Sbjct: 280 NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGK-ID 338
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
AK+++ + P SY + L EG++ + LD+M + G P ++ Y + L
Sbjct: 339 EAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSIL 398
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQV 397
A+L K+G DEAL + E+ G P YN L L +G+ A+ M L+ +S
Sbjct: 399 ASLCKNGNADEALNIFEKLGEVGC-PPNAGSYNTLFGALWSSGDKIRALGMILEMLSN-- 455
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEML-IRSYWPCVETYNVLIRGLCSIGKQYE 456
G + TY L+ LCRDG +A +L +M P V +YN ++ GLC + + +
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIID 515
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASV 483
A+ L M+++ LP+ + ++ L+ +
Sbjct: 516 AIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + + N ++ C+ R D A V M +G PD +Y+IL+ C RL+ A
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
++ + + ++ Y L+ A QG I +AM++L+++L +GL+ + + +
Sbjct: 203 VMDQLL----KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVV 258
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C +G ++ A ++ G + +++Y+ + DL NEG+ G+K++ +M KG
Sbjct: 259 NGMCKEGM-LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC 317
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ + Y + AL +D G D + + V
Sbjct: 318 EPNPITYSTLITALCRD-------------------------------GKIDEAKNVLKV 346
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M K+ +G +Y L+ LCR+G+ A L++M+ + P + +YN ++
Sbjct: 347 M------KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILAS 400
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
LC G EA+ E++ P+ +++L ++ + + LE LS+
Sbjct: 401 LCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 134/346 (38%), Gaps = 48/346 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I I E +++D+M + + + G L+ A +
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
S+ CV ++N LL++++ E K E L ++ C + + + L+ LC
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI-----TYSTLITALC 332
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A +V + M + PD SY L+ LC + +++ A L M G
Sbjct: 333 RDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI----SGGHL 388
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKI------------------------------- 251
DI+ Y ++L +LC G +A+ I EK+
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448
Query: 252 ----LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L G+ + + + C C DG + + L++ P++ SY+ + + L
Sbjct: 449 ILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLC 508
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
RI++ +VL M +G P+ Y + + G +A+E+
Sbjct: 509 KVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 212/483 (43%), Gaps = 31/483 (6%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD-- 80
+P +L F+ K N+R N Y ++ ILS E + ++Q+ D C+ KD
Sbjct: 81 NPTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRG 138
Query: 81 ------------------SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+VF ++ Y G A+ +F N+ + + +S N+LL
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+VK + AH ++ + + + ++++++ C+ + D A ++M+ G
Sbjct: 199 NNLVKNGETHTAHYVY-QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +YH L+ G + + A +L M S+KG ++V Y L+ C Q K+
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGVSRNVVTYTLLIKGYCKQCKMD 313
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L + + P R + + + C G+ I+ A L++E L G +L ++
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK-IDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G I E + V+ M P Y L ++G EA + ++ + +G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
PTV YN LLKGLC G A+ M K G + Y L+DGL + F
Sbjct: 433 -IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX-GVAPDEVGYSTLLDGLFKMENFEG 490
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
AS + +++L R + T+N +I GLC +GK EA ++M PD + +L+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 482 SVC 484
C
Sbjct: 551 GYC 553
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 202/493 (40%), Gaps = 41/493 (8%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + + Y +++ +E + D+M + E + T ++ R G ++A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ ++ + + ++TLL + K E A L+ KSRI + N ++
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-TFNTMIS 515
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A +F +M GC PD +Y L+ G C + +A + +M ++
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM----ERE 571
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
I +Y +L+ L ++ + +L ++ +GL + C +G ++
Sbjct: 572 XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM-LDK 630
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL-------- 331
A S E G ++ S M LY GRI E + ++ +M GF+P
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690
Query: 332 ------------------------VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
++Y +A L K G VD+A +KG FVP
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVPDN 749
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y L+ G AGN A +M ++ G V N TY L++GLC+ A R+
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRR-GLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
++ + +P V TYN LI G C IG A ++MI + P + +S+L+ + C
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL-CKH 867
Query: 488 ADLNVCRKTLEQL 500
D+ K L Q+
Sbjct: 868 GDIERSMKLLNQM 880
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 170/385 (44%), Gaps = 13/385 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G++ EA +F + C ++ TL+ K S + A ++
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA--FKVKG 566
Query: 142 CYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
E + I+ N L+ L + RR + EM +G P+ +Y L+ G C +
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L++A +S ++ +++ G +I+I T++ L G+I +A +++K++ G
Sbjct: 627 MLDKA----FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ D+ I+ ++E+ +P+ Y+ L G++ + +
Sbjct: 683 ECFLKSDI----RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 738
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KGF P Y + G VDEA + +EM++ VP + YN L+ GLC +
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR-LRDEMLRRGLVPNIVTYNALINGLCKS 797
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
N A K+ Q G N TY L+DG C+ G A ++ ++M+ P V T
Sbjct: 798 ENVDRAQRLFHKL-HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMI 465
Y+ LI GLC G ++ L +MI
Sbjct: 857 YSALINGLCKHGDIERSMKLLNQMI 881
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 171/407 (42%), Gaps = 34/407 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +MI L + ++ E +E+ D+MK C + T I Y +A + +A + +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + +N+L+ + K +L E +L G + I + L+D C+
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG--LTPNIVTYGALIDGWCKEG 626
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----FWRISQKGS 221
D A + EM G + ++ GL R++EA L+ M F+ +
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686
Query: 222 GEDI------------------------VIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
DI ++Y + LC GK+ DA + + KG
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF- 745
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P + + + + +++ A L +E L RG +P++ +Y+A+ L + +
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ ++ KG +P++V Y + K G +D A + ++++M++ P+V Y+ L+ GL
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK-LKDKMIEEGISPSVVTYSALINGL 864
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
C G+ ++ L +M K G + Y LV G + + E S+
Sbjct: 865 CKHGDIERSMKLLNQMIK-AGVDSKLIEYCTLVQGGFKTSNYNEMSK 910
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 20/440 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + + E + + +MK C F + I Y + G+L+E L + + +
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ K ++E A+ F + V + + + + +D C+ A
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYF-AAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F +M +G + +Y L+ G C RL++A LL M ++G ++V Y
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV----RQGVPLNVVTYTV 368
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPK------SRRHRIDLCPCNDGEDIEGAKSLI 284
L+ LC + K+ +A +L + + G++A + H ++ ++ E A L+
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN-------KNSEKALGLL 421
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E +G ++ Y A+ L N ++ E +L +M G P+ ++Y + A FK
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V EA+ ++++ + G F P V Y L+ GLC AG+ A+ + KM + +G N +
Sbjct: 482 GKVPEAIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKM-RDLGLDPNVQ 539
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y LVDGLC++G EA ++ EM+ + Y L+ G G ++A +M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599
Query: 465 ISQAKLPDISVWSSLVASVC 484
I D+ ++ ++ C
Sbjct: 600 IDSGLQLDLFCYTCFISGFC 619
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 24/400 (6%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWEV 147
R+G+L LF+ L N +FN ++ + KE +L A LF R C
Sbjct: 171 RSGRLVR--RLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFSRMKEMGCL---- 220
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N L+D +C D + +EM GC D +Y+ L+ C R+ A
Sbjct: 221 -PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA-- 277
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
Y F + ++G ++V + T + A C +G +++AM++ ++ +G+ + +
Sbjct: 278 --YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G ++ A L++E ++R G+P ++ +Y+ + L E ++ E + VL M G
Sbjct: 336 DGTCKAGR-LDDAIVLLDE-MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ ++Y + F + ++AL ++ E KG + + +Y L++GLC+ A
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL-DISLYGALIQGLCNVHKLDEA 452
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L KM + G N Y ++D + G+ EA +L+++L + P V TY LI
Sbjct: 453 KSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GLC G EA+ +M P++ +++LV +C N
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND-----GEDIEGAK 281
+ TLL L D+G + DA++ + ++ + L+ P + R CN D G
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARV--RELRVPPNTR------TCNHILLRLARDRSG-- 173
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ + P++ +++ + L EG + E + M+ G P +V + + +
Sbjct: 174 RLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY 233
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G +DE +E + EEM + V YN L+ C G A Y M ++ G +A
Sbjct: 234 GKCGELDE-VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMA 291
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N T+ VD C++G EA ++ +M +R TY LI G C G+ +A++ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+EM+ Q ++ ++ LV +C
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLC 374
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 166/405 (40%), Gaps = 58/405 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +++ + + + E ++ QM+ + + I +AG+L++A+ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + ++ L+ + KE K+ EA +L + K+ +++ LL L
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME------KAGVRANELLYTTLI 405
Query: 163 QC----RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ S+ AL + EM +G D Y L++GLCN +L+EA LL M +
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM----DE 461
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG---- 274
G + +IY T++ A GK+ +A+ +L+KIL G + + I C DG
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-----NVITYCALIDGLCKA 516
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
I+ A S N+ G P++ +Y+A+ L G + E ++ +EM KG V+Y
Sbjct: 517 GSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 335 EAKLAALFKDG-----------MVDEALEV-----------------------IEEEMVK 360
A L K G M+D L++ + EM+
Sbjct: 577 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
P VYN L+ GN A+ +M + + + +T
Sbjct: 637 HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDT 681
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 17/317 (5%)
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R HIL++ L DR + R+ ++ ++ + ++ LC +G++ +A
Sbjct: 158 RTCNHILLR-LARDRS--------GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208
Query: 246 QILEKILRKG-LKAPKSRRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ ++ G L + ID C + +++E L+ E G + +Y+A+
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE---QLVEEMRRSGCKADVVTYNALI 265
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
GR+ M+ +G ++V + + A K+G+V EA+++ + V+G
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+ Y L+ G C AG A++ L +M +Q G N TY +LVDGLC++ + EA
Sbjct: 326 LNEF-TYTCLIDGTCKAGRLDDAIVLLDEMVRQ-GVPLNVVTYTVLVDGLCKERKVAEAE 383
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VL M Y LI G +A+ L EM ++ DIS++ +L+ +
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443
Query: 484 CCNTADLNVCRKTLEQL 500
CN L+ + L ++
Sbjct: 444 -CNVHKLDEAKSLLTKM 459
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 9/215 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PNY +Y +M+ +S ++ E ++ ++ + + I +AG ++E
Sbjct: 466 PNY----IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+S F + Q++ L+ + K L A LF + ++ LL
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
L Q D A + +M G D Y + G CN + EA + M
Sbjct: 582 GYLKQGNLHD-AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH--- 637
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
G D +Y L+ G +++A+ + +++ R
Sbjct: 638 -GIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 199/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 121 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 180
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K + A + L ++++ + N ++D LC+ R D
Sbjct: 181 RGCQPNLVTYGVVVNGLCKRGDTDLA-LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 295
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMV 354
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P + +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 355 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 414
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 415 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 472
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 533 PLPNSGTYNTLI 544
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 198/434 (45%), Gaps = 37/434 (8%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + V+ ++N L+ + S++ A L +
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 110 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167
Query: 202 LNEATHLLYSMFWR---------------ISQKGSGE----------------DIVIYRT 230
+EA L+ M R + ++G + D+VI+ T
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ +LC + DA+ + +++ KG++ + C C+ G A L+++ + +
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSDASQLLSDMIEK 286
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+L +++A+ EG+ VE +K+ D+M + P + Y + + +D+A
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ E + K F P V YN L+KG C + ++MS + G V + TY L+
Sbjct: 347 KQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLI 404
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GL DG A +V ++M+ P + TY++L+ GLC+ GK +A+ + M
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464
Query: 471 PDISVWSSLVASVC 484
DI ++++++ +C
Sbjct: 465 LDIYIYTTMIEGMC 478
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 175/393 (44%), Gaps = 49/393 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++A+ LF + + + FN LL + K K + I E+ + +
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTY 85
Query: 155 NLLMDVLCQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS LAL + +M G P + L+ G C+ +R+++A L+ M
Sbjct: 86 NILIN--CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D + + TL+ L K +A+ ++++++++G +
Sbjct: 144 V----EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--------------- 184
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
P+L +Y + L G +L++M +V
Sbjct: 185 ---------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 223
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
++ + +L K VD+AL + +E KG P V Y+ L+ LC G + A L
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Query: 393 M-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M K++ N T+ L+D ++G+F+EA ++ ++M+ RS P + TYN L+ G C
Sbjct: 283 MIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +A E M+S+ PD+ +++L+ C
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T L K+ + A K++ + ++ + + Y S++ +R+ + K
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYNSLVNGFCMHDRLDKAK 347
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ + M C + T I+ + ++ ++ + LF+ +S V T ++ TL++ +
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + A +F + V I + ++L+D LC + + AL VF M D
Sbjct: 408 FHDGDCDNAQKVF-KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 466
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y +++G+C ++++ + +F +S KG ++V Y T++ LC + +Q+A
Sbjct: 467 IYIYTTMIEGMCKAGKVDDG----WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 246 QILEKILRKG 255
+L+K+ G
Sbjct: 523 ALLKKMKEDG 532
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 194/437 (44%), Gaps = 8/437 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ LS S + + KE+I +M E + IR Y GQL+EA L
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + V ++NT++ + K ++ A L L + + S N L+ +
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKL-LDVMVNKNLMPDLVSYNTLIYGYTR 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A +F E+ F+G P +Y+ L+ GLC L+ A L M + G
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI----KHGPDP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + L+ C G + A ++ +++L +GL+ P + + D A +
Sbjct: 399 DVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ-PDRFAYITRIVGELKLGDPSKAFGM 457
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E L RG P L +Y+ L+ G + E +++ +M G P V Y + + A
Sbjct: 458 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 517
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G + +A V E + KG F P+V Y +L+ G +A+++ +M ++ G N
Sbjct: 518 AGHLRKARAVFLEMLSKGIF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNV 575
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L++GLC+ + +A + EM + P TY +LI C++G EA+ ++
Sbjct: 576 ITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 635
Query: 464 MISQAKLPDISVWSSLV 480
M+ + PD S+L+
Sbjct: 636 MLDREIQPDSCTHSALL 652
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 227/481 (47%), Gaps = 22/481 (4%)
Query: 11 PTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE---MKE 66
P L +++ + P AL+ F+ A E+ ++ + YA ++ IL+ + + + E
Sbjct: 47 PQLLVRVLNTVRHRPAVALRFFRWA-ERQTGFKRSELTYAVILDILARNGLMRSAYCVME 105
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+ +K ++ + + YA+ L + + +F + + ++ N +L+ +
Sbjct: 106 KVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLR 165
Query: 127 -KESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++S ++ A R Y V+ I+ + N ++D C+ + AL + +M G
Sbjct: 166 DRDSSIDVA-----REVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMG 220
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ +Y++L+ GL + L +A L+ M R+ + S Y L+ C++G++
Sbjct: 221 CLPNDVTYNVLVNGLSHSGELEQAKELIQEML-RLGLEVSA---YTYDPLIRGYCEKGQL 276
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++ E++L +G + I C G + A+ L++ + + +P L SY+
Sbjct: 277 DEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR-VSDARKLLDVMVNKNLMPDLVSYNT 335
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G I E + E+R +G PS+V Y + L + G +D A+ +++EM+K
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMR-LKDEMIKH 394
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V + IL++G C GN +A +M + G + Y + G + G +
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR-GLQPDRFAYITRIVGELKLGDPSK 453
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A + EEML R + P + TYNV I GL +G EA +++M+ +PD ++S++
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 513
Query: 482 S 482
+
Sbjct: 514 A 514
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 186/412 (45%), Gaps = 12/412 (2%)
Query: 76 CECKDSV--FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
C + +V + T + ++ + G++ EA+ L + + C+ ++N L+ + +LE
Sbjct: 184 CGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQ 243
Query: 134 AHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L G EV + + + L+ C+ + D A + +EM +G P +Y+ +
Sbjct: 244 AKELIQEMLRLGLEVSA--YTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTI 301
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
M GLC R+++A LL M K D+V Y TL++ G I +A + ++
Sbjct: 302 MYGLCKWGRVSDARKLLDVMV----NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+GL + + C G D++ A L +E + G P + +++ + G +
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMG-DLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL 416
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
++ DEM +G P Y ++ K G +A + EE + +G F P + YN+
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNV 475
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+ GL GN A +KKM G V + TY ++ G +A V EML +
Sbjct: 476 FIDGLHKLGNLKEASELVKKMLYN-GLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSK 534
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+P V TY VLI G+ A++ EM + P++ +++L+ +C
Sbjct: 535 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 586
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 196/443 (44%), Gaps = 20/443 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +M+ + ++ E +++ QM+ C D + + + +G+L +A L + +
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ +++ L++ ++ +L+ A S G E+ SR + + N +M LC
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEA------SRLGEEMLSRGAVPTLVTYNTIMYGLC 306
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R A + M + PD SY+ L+ G + EA + +F + +G
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA----FLLFAELRFRGLV 362
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+V Y TL+ LC G + AM++ +++++ G + C G ++ AK
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLG-NLPMAKE 421
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E L RG P +Y + G + + +EM +GF P L+ Y + L
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSKQVGCVA 401
K G + EA E++++ + G VP Y ++ AG+ A ++L+ +SK G
Sbjct: 482 KLGNLKEASELVKKMLYNG-LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSK--GIFP 538
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +L+ GR A EM + P V TYN LI GLC + K +A +
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
EM ++ P+ ++ L+ C
Sbjct: 599 TEMQAKGISPNKYTYTILINENC 621
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
++ + + K++ KG+ +R+ + I+ A+ + N + G P++ +Y+
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYN 194
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M +G++ E ++L +M+ G P+ V Y + L G +++A E+I+E +
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G V + Y+ L++G C+ G A ++M + G V TY ++ GLC+ GR
Sbjct: 255 GLEV-SAYTYDPLIRGYCEKGQLDEASRLGEEMLSR-GAVPTLVTYNTIMYGLCKWGRVS 312
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A ++L+ M+ ++ P + +YN LI G +G EA + E+ + +P + +++L+
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372
Query: 481 ASVCCNTADLNVCRKTLEQL 500
+ C DL+V + +++
Sbjct: 373 DGL-CRMGDLDVAMRLKDEM 391
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 203/418 (48%), Gaps = 29/418 (6%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQS------FNTLLKEMVKESKLEAAHILFLR 140
+ A++G N+A+S FK+L N+ + +N LLK ++E+++E L+ +
Sbjct: 82 VTVLAKSGFFNKAISHFKSLRS----NFPEKQPSIYLYNVLLKSCIRENRVELVSWLY-K 136
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
V + NLL+ +LC + A +F +M +GC P+ ++ IL++G C
Sbjct: 137 DMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAG 196
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-KAP 259
++ LL M G + V+Y TL+ + C +GK DA ++++K+ GL
Sbjct: 197 LASKGLELLGQM----RTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHV 252
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSL----INEALIRGGIP--SLASYSAMAIDLYNEGRIV 313
++ RI C G+ +E ++ I+E L G+P ++ +Y M + EG +
Sbjct: 253 ETFNSRISAL-CGSGKILEASRIFRDMQIDEEL---GLPHPNVITYKLMLMGFCKEGMLE 308
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E ++D M+ + +L Y L L ++G + EA V++E + G P + YNI+
Sbjct: 309 EAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG-IEPDIYSYNIV 367
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ GLC G + A M + M + G + + TY L+ G C G+ EA+ +L EM+ +
Sbjct: 368 MDGLCKNGMLSDARMLMGLMIRN-GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
P T NVL+ L G+ EA L++M + D +V +++ + CN L+
Sbjct: 427 CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVD-TVTCNIIINALCNNGQLD 483
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 211/496 (42%), Gaps = 62/496 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +IG+L +S + + +E+ D+M CE + F +R Y RAG ++ + L +
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM 208
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +NTL+ KE K A L + V +++ N + LC +
Sbjct: 209 RTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLV-PHVETFNSRISALCGSGK 267
Query: 167 SDLALHVFQEMDFQG----CYPDRESYHILMKGLCNDRRLNEATHLLYSM---------- 212
A +F++M +P+ +Y +++ G C + L EA L+ +M
Sbjct: 268 ILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLE 327
Query: 213 ---FWRISQKGSGE------------------DIVIYRTLLFALCDQGKIQDAMQILEKI 251
W + +G+ DI Y ++ LC G + DA ++ +
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+R G+ + C+ G+ E A +L++E + P+ + + + L+ EGR
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFE-ANNLLHEMISNNCSPNTYTCNVLLHSLWKEGR 446
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG---------T 362
I E + +L +M KG+ V + AL +G +D+A+E++ G +
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNS 506
Query: 363 FV-------------PTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGI 408
F+ P + Y+ ++ GLC AG +++ MSK G + Y
Sbjct: 507 FIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSK--GLQPDSAIYDT 564
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ CR+G+ A +VL++M R ++TYN LI GL S + +E ++EM +
Sbjct: 565 FIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKG 624
Query: 469 KLPDISVWSSLVASVC 484
PD+ ++ ++ +C
Sbjct: 625 VSPDVCTYNHMLNCLC 640
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 199/443 (44%), Gaps = 26/443 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDS----CECKDSVFATAIRTYARAGQLNEAVSL 102
+ S I L S +I E + M+ D + + + + G L EA +L
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313
Query: 103 FKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + N +N +S+N L +++ KL A I+ L+ G ++ I S N++MD L
Sbjct: 314 VDTMKRNANFINL-ESYNIWLLGLIRNGKLLEAWIV-LKEMLGIGIEPDIYSYNIVMDGL 371
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ A + M G PD +Y L+ G C+ ++ EA +LL+ M IS S
Sbjct: 372 CKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEM---ISNNCS 428
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ LL +L +G+I +A +L+K+ KG + I CN+G+ ++ A
Sbjct: 429 -PNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQ-LDKAI 486
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++N + G +L + I L V D + K P LV Y ++ L
Sbjct: 487 EIVN-GMWTHGSAALGNLGNSFIGL-----------VDDTISGKKCTPDLVTYSTIISGL 534
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G +D+A + E M KG P +Y+ + C G + A LK M K+ GC
Sbjct: 535 CKAGRLDDAKKKFIEMMSKG-LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR-GCNK 592
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+TY L+ GL + E +++EM + P V TYN ++ LC G+ +A L
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+EM+ + P+IS + L+ + C
Sbjct: 653 DEMLQKGISPNISSFRILIKAFC 675
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 157 LMDVLCQCRRSDLALHVFQEM--DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-F 213
L+ VL + + A+ F+ + +F P Y++L+K + R+ + L M
Sbjct: 81 LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+S + + L+ LCD G ++DA ++ +K+ +G + + + C
Sbjct: 141 ARVSPEA-----YTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRA 195
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G +G + L+ + G +P+ Y+ + EG+ + +K++D+MR G P +
Sbjct: 196 GLASKGLE-LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVET 254
Query: 334 YEAKLAALFKDGMVDEALEV-----IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
+ ++++AL G + EA + I+EE+ G P V Y ++L G C G A
Sbjct: 255 FNSRISALCGSGKILEASRIFRDMQIDEEL--GLPHPNVITYKLMLMGFCKEGMLEEAKT 312
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ M + + N E+Y I + GL R+G+ LEA VL+EML P + +YN+++ GL
Sbjct: 313 LVDTMKRNANFI-NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGL 371
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G +A M + MI LPD +S+L+ C
Sbjct: 372 CKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYC 407
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 174/411 (42%), Gaps = 34/411 (8%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
++T + Y G++ EA +L + NC T + N LL + KE ++ EA ++L
Sbjct: 398 TYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKM 457
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG------------------- 181
+ G+ V + + N++++ LC + D A+ + M G
Sbjct: 458 NEKGYGVDT--VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTI 515
Query: 182 ----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
C PD +Y ++ GLC RL++A F + KG D IY T + + C
Sbjct: 516 SGKKCTPDLVTYSTIISGLCKAGRLDDAK----KKFIEMMSKGLQPDSAIYDTFIHSFCR 571
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+GKI A Q+L+ + ++G + + L + + E LI+E +G P +
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFE-LYGLIDEMREKGVSPDVC 630
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ M L GRI + VLDEM KG P++ + + A K + EV E
Sbjct: 631 TYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF--E 688
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ +Y ++ L G A A + + + N Y L+D LC+D
Sbjct: 689 IALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGN-FLYKDLIDRLCKDE 747
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ AS VL ++ + Y ++ +I G +G ++ A E M+ A
Sbjct: 748 KLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMA 798
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 209/471 (44%), Gaps = 35/471 (7%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N VY ++I + + + ++++D+M+ D F I +G++ EA
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181
Query: 101 SLFKNLSQFNCVNWTQ----SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+F+++ + Q ++N +L KE LE A LF + + +R +S N+
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNR-ESYNI 240
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+ L + + A V +EM G P+ SY+I+M GLC + L +A L+ M
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM---- 296
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ G D V Y TLL C GK+ +A +L +++R G +P + I L
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGC-SPNNYTCNILLYSLWKEGR 355
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--------- 327
I A+ L+ + +G + + + + L N G++ + ++++ M T G
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNS 415
Query: 328 --------------WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
P L+ Y ++ L K G V EA + E M K P +Y++
Sbjct: 416 YIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK-NLQPDSAIYDVF 474
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ C G + A LK M K+ GC +TY L+ GL + E +++EM R
Sbjct: 475 IHSFCKEGKISSAFRVLKDMEKK-GCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG 533
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V YN ++ LC G+ +A L+EM+ + P+IS +S L+ + C
Sbjct: 534 VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC 584
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 215/499 (43%), Gaps = 68/499 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +IG+L +S + + +E+ D+M CE + F +R Y RAG ++ + L +
Sbjct: 58 TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM 117
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRS-----------------CYGWEV 147
+ +NTL+ KE K + A L +R C +V
Sbjct: 118 RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKV 177
Query: 148 -------------------KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ I + NL++ C+ + A +F++M +RES
Sbjct: 178 LEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES 237
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+I + GL +L EA +L M G ++ Y ++ LC G + DA ++
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMV----DMGMEPNVYSYNIVMDGLCKNGVLFDARMLM 293
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+ G+ + C+ G+ + A +++ E + G P+ + + + L+
Sbjct: 294 RLMTSSGVLPDTVTYTTLLHGYCHTGK-VSEANNVLREMMRDGCSPNNYTCNILLYSLWK 352
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF----- 363
EGRI E +++L +M KG+ V + L +G +D+A+E++ G+
Sbjct: 353 EGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNL 412
Query: 364 -----------------VPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSKQVGCVANGET 405
+P + Y+ ++ GLC AG A +++ M K + +
Sbjct: 413 GNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNL--QPDSAI 470
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y + + C++G+ A RVL++M + ++TYN LI GL S + +E ++EM
Sbjct: 471 YDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR 530
Query: 466 SQAKLPDISVWSSLVASVC 484
+ PD+S+++++++S+C
Sbjct: 531 ERGVSPDVSIYNNVLSSLC 549
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 15/322 (4%)
Query: 170 ALHVFQEMDFQGCYPDRES----YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A+ F+ + F+ +P+ Y++L++ + R++ + L M G +
Sbjct: 3 AISQFKSLRFR--FPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMV----ASGVSPET 56
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ L+ LCD G + DA ++ +K+ KG + + + C G +G + L+
Sbjct: 57 YTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLE-LLG 115
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E G P+ Y+ + EG+ + +K++DEMR G P +V + A+++AL G
Sbjct: 116 EMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSG 175
Query: 346 MVDEALEVIEE---EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
V EA + + + V G P + YN++L G C G A +KM K + N
Sbjct: 176 KVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM-KVSENLMN 234
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
E+Y I + GL R G+ LEA VL+EM+ P V +YN+++ GLC G ++A M +
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M S LPD +++L+ C
Sbjct: 295 LMTSSGVLPDTVTYTTLLHGYC 316
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 37/411 (9%)
Query: 98 EAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS- 153
+A+S FK+L +F S +N LL+ KE +++ C W K + S
Sbjct: 2 KAISQFKSL-RFRFPENPPSIYLYNVLLRSCTKEGRVD---------CVSWLCKDMVASG 51
Query: 154 -------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
N+L+ +LC D A +F +M +GC P+ S+ IL++G C ++
Sbjct: 52 VSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGL 111
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M + G + V+Y TL+ + C +GK DA ++++++ + GL +
Sbjct: 112 ELLGEM----RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNAR 167
Query: 267 DLCPCNDGEDIEGAKSL----INEALIRGGIP--SLASYSAMAIDLYNEGRIVEGDKVLD 320
C+ G+ +E ++ I+E L G+P ++ +Y+ M EG + E + +
Sbjct: 168 ISALCSSGKVLEASRIFRDMQIDEVL---GLPQPNIITYNLMLGGFCKEGMLEEARALFE 224
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M+ + Y L L + G + EA +++ +EMV P V YNI++ GLC
Sbjct: 225 KMKVSENLMNRESYNIWLLGLVRIGKLLEA-QLVLKEMVDMGMEPNVYSYNIVMDGLCKN 283
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A M ++ M+ G + + TY L+ G C G+ EA+ VL EM+ P T
Sbjct: 284 GVLFDARMLMRLMTSS-GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYT 342
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
N+L+ L G+ EA L++M + + D +V ++V CN L+
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKMNEKGYVID-TVTCNIVIDGLCNNGKLD 392
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 180/444 (40%), Gaps = 100/444 (22%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ T + Y G+++EA ++ + + + C + N LL + KE ++ EA +L
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG------------------- 181
+ G+ + + + N+++D LC + D A+ + M G
Sbjct: 367 NEKGYVIDT--VTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSD 424
Query: 182 ----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
C PD SY ++ GLC R+ EA M + Q D IY + + C
Sbjct: 425 SRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQP----DSAIYDVFIHSFCK 480
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+GKI A ++L+ + +KG CN +L
Sbjct: 481 EGKISSAFRVLKDMEKKG---------------CN---------------------KTLQ 504
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+++ + L ++ +I E ++DEMR +G P + +Y L++L + G V +A V++E
Sbjct: 505 TYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEM 564
Query: 358 MVKGTFVPTVRVYNILLKGLCDA---------------------------------GNSA 384
+ KG P + ++IL+K C A G
Sbjct: 565 LQKG-ISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEV 623
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
V L + + Y L+D LC+D + +AS +L +++ + YW ++ +
Sbjct: 624 VKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPV 683
Query: 445 IRGLCSIGKQYEAVMWLEEMISQA 468
I GL G ++EA E+M+ A
Sbjct: 684 IDGLGKRGNKHEADELAEKMMEMA 707
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 74/487 (15%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ FK + ++P + +Y ++ ++ R+ + + M + F
Sbjct: 3 AISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVL 62
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I +G L++A LF + + C SF L++ G+
Sbjct: 63 IGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVR--------------------GY- 101
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
C+ + L + EM G P++ Y+ L+ C + + ++A
Sbjct: 102 ---------------CRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI-----LEKILRKGLKAPKS 261
L+ M + G D+V + + ALC GK+ +A +I ++++L GL P
Sbjct: 147 KLVDEM----RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL--GLPQPNI 200
Query: 262 RRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + L C +G +E A++L + + + + SY+ + L G+++E VL
Sbjct: 201 ITYNLMLGGFCKEGM-LEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLK 259
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM G P++ Y + L K+G++ +A ++ M +P Y LL G C
Sbjct: 260 EMVDMGMEPNVYSYNIVMDGLCKNGVLFDA-RMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G + A L++M + GC N T IL+ L ++GR EA +L++M + Y T
Sbjct: 319 GKVSEANNVLREMMRD-GCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377
Query: 441 YNVLIRGLCSIGKQYEAV-----MW-----------------LEEMISQAK-LPDISVWS 477
N++I GLC+ GK +A+ MW +++ S+ K +PD+ +S
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYS 437
Query: 478 SLVASVC 484
++++ +C
Sbjct: 438 TIISGLC 444
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 212/496 (42%), Gaps = 70/496 (14%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L +S R + +EV D+M C + F +R Y RAG A+ L + F
Sbjct: 157 LIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFG 216
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRS-------------------CYGWEV---- 147
+NTL+ +E + E A L R C ++
Sbjct: 217 VQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEAS 276
Query: 148 ---------------KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ I + NL+++ C+ + A + + M G + ESY+I
Sbjct: 277 RIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ GL + +L EA L M KG +I + T++ LC G I DA I+ ++
Sbjct: 337 LLGLVRNGKLLEAQLALKEMV----DKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMI 392
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G+ P + + L C + A ++++E + RG P+ + + + L+ EGRI
Sbjct: 393 SSGI-GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRI 451
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG---------TF 363
E +K+L +M + + V + L K G +DEA+E++E + G +F
Sbjct: 452 FEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSF 511
Query: 364 V-------------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET--YGI 408
+ P + Y+I++ GLC AG A KK + VG + ++ Y
Sbjct: 512 IGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEA---RKKFIEMVGKSLHPDSIIYDT 568
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ C+ G+ A RVL++M R ++TYN LI GL S + +E L++M +
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628
Query: 469 KLPDISVWSSLVASVC 484
P+I ++++++ +C
Sbjct: 629 ITPNICTYNNMISCLC 644
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 188/418 (44%), Gaps = 47/418 (11%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF--NTLLKEMVKESKLEAAHILFLRSCYG 144
IR A++G + A S F++ N + N +L+ ++E K+++ L+ +
Sbjct: 86 IRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY-KDMVV 144
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
V +LNLL+ LC R + A VF +M +GC P+ S+ IL++G C
Sbjct: 145 AGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMR 204
Query: 205 ATHLLYSM-------------------------------FWRISQKGSGEDIVIYRTLLF 233
A LL M R+ + G D+V + + +
Sbjct: 205 ALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRIS 264
Query: 234 ALCDQGKIQDA------MQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
ALC GKI +A MQI E++ GL P + L C +G +E AK+L+
Sbjct: 265 ALCSAGKILEASRIFRDMQIDEEL---GLPRPNITTFNLMLEGFCKEGM-LEEAKTLVES 320
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + L SY+ + L G+++E L EM KG P++ + + L K+G+
Sbjct: 321 MKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A +I M+ P Y+ LL G C G A L +M ++ GC N T
Sbjct: 381 ISDA-RMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRR-GCSPNTYTC 438
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
IL+ L ++GR EA ++L++M RSY T N++I GLC GK EAV +E M
Sbjct: 439 NILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 16/355 (4%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQ--GCYPDRESYHILMKGLCNDRRLNEATHLLY 210
SL L+ +L + SDLA FQ Q P Y+++++ + +++ + L
Sbjct: 81 SLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYK 140
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M G + L+ LCD G+ +DA ++ +K+ KG + + +
Sbjct: 141 DMVV----AGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGY 196
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G + A L++ G P+ Y+ + EGR E +++++ MR G +P
Sbjct: 197 CRAGLSMR-ALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPD 255
Query: 331 LVMYEAKLAALFKDGMVDEALEV-----IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
+V + ++++AL G + EA + I+EE+ G P + +N++L+G C G
Sbjct: 256 VVTFNSRISALCSAGKILEASRIFRDMQIDEEL--GLPRPNITTFNLMLEGFCKEGMLEE 313
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A ++ M K+ G + E+Y I + GL R+G+ LEA L+EM+ + P + ++N ++
Sbjct: 314 AKTLVESM-KRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVM 372
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
GLC G +A M + MIS PD +S+L+ CC+T + L ++
Sbjct: 373 DGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHG-CCSTGKVLKANNILHEM 426
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 189/436 (43%), Gaps = 13/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ E ++D M C+ + + ++ +A+ + +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A R S YG++ + S ++ LC +
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT--VSYTTVLKGLCAAK 264
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + +F EM + C P+ ++ +L++ C + A +L M S G +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM----SGHGCAANT 320
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ ++ +C QG++ DA Q L + G +P + + L E E AK L+
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGC-SPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + + P+ +++ L +G I + ++++M G ++V Y A + G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD ALE+ K P Y LL GLC+A A L +M Q C N T
Sbjct: 440 RVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 494
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ +LV C+ G EA ++E+M+ P + TYN L+ G+ EA+ L ++
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554
Query: 466 SQAKLPDISVWSSLVA 481
S PDI +SS++
Sbjct: 555 SNGVSPDIVTYSSIIG 570
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 19/413 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ IR G++ EA+SL ++ C ++ LL+ + K + +A +L
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G I + N++++ +C+ R D A + G PD SY ++KGLC +
Sbjct: 207 RAKG--CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R + L F + +K + V + L+ C G ++ A+Q+LE++ G A
Sbjct: 265 RWEDVEEL----FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C G ++ A +N G P SY+ + L R + ++L
Sbjct: 321 TLCNIVINTICKQGR-VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P+ V + + L + G++++A +IE+ G V V YN L+ G C
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV-TYNALVNGFCVQ 438
Query: 381 G--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G +SA+ + Y + C N TY L+ GLC R A+ +L EML + P V
Sbjct: 439 GRVDSALELFY------SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNTAD 489
T+NVL+ C G EA+ +E+M+ P++ +++L+ + CN+ +
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 217/515 (42%), Gaps = 50/515 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K A+++ E + K N Y +I + R+ + +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK--GCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E ++++ + + T ++ A + + LF + + NC+ +F+ L++
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ +E A I L G + N++++ +C+ R D A M GC PD
Sbjct: 296 CRGGMVERA-IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY ++KGLC R +A LL M +K + V + T + LC +G I+ A
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMV----RKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI------------ 293
++E++ G + +I +L+N ++G +
Sbjct: 411 MLIEQMSEHGCEV-----------------NIVTYNALVNGFCVQGRVDSALELFYSMPC 453
Query: 294 -PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ +Y+ + L N R+ ++L EM K P++V + ++ + G++DEA+E
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE-----TYG 407
++E+ M G P + YN LL G+ NS A+ L G V+NG TY
Sbjct: 514 LVEQMMEHGC-TPNLITYNTLLDGITKDCNSEEALELLH------GLVSNGVSPDIVTYS 566
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ L R+ R EA ++ + P YN ++ LC A+ + M+S
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+P+ + +L+ + N L R L +L S
Sbjct: 627 GCMPNELTYITLIEGL-ANEDFLKETRDLLRELCS 660
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 21/408 (5%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
++F E EK N N + ++ + +V++QM G C ++ I
Sbjct: 271 ELFAEMMEK--NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYG 144
T + G++++A N+ + C T S+ T+LK + + + E A L ++C
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
EV + N + +LCQ + A + ++M GC + +Y+ L+ G C R++
Sbjct: 389 NEV-----TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L YSM + + + Y TLL LC+ ++ A ++L ++L+K +
Sbjct: 444 ALELFYSMPCK-------PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C G ++ A L+ + + G P+L +Y+ + + + E ++L + +
Sbjct: 497 VLVSFFCQKGL-MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P +V Y + + L ++ V+EA+++ G P +YN +L LC N+
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTD 614
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
A+ + M GC+ N TY L++GL + E +L E+ R
Sbjct: 615 GAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 661
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 166/366 (45%), Gaps = 11/366 (3%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L+ ++ L A L R+ E L+ + LC+ R+ A V + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRN-LCRRGRTSDAARVLRAAE 105
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G D +Y+ L+ G C +L+ A L+ SM D Y ++ LCD+
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM-------PVAPDAYTYTPIIRGLCDR 158
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G++ +A+ +L+ +L +G + P + + L A +++E +G P++ +
Sbjct: 159 GRVGEALSLLDDMLHRGCQ-PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 217
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + + EGR+ + + L+ + + GF P V Y L L ++ E+ E M
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K +P +++L++ C G A+ L++MS GC AN I+++ +C+ GR
Sbjct: 278 EKNC-MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGR 335
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A + L M P +Y +++GLC + +A L+EM+ + P+ +++
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 479 LVASVC 484
+ +C
Sbjct: 396 FICILC 401
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K N N + + I IL + I + +I+QM CE +
Sbjct: 374 AKELLKEMVRK--NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G+++ A+ LF ++ C T ++ TLL + +L+AA L L +
Sbjct: 432 VNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAEL-LAEMLQKD 487
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N+L+ CQ D A+ + ++M GC P+ +Y+ L+ G+ D EA
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 547
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL+ + G DIV Y +++ L + ++++A+++ + G++ ++I
Sbjct: 548 ELLHGLV----SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L C + +GA + G +P+ +Y + L NE + E +L E+ ++G
Sbjct: 604 LLALCKRC-NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A+L L + EA +++ +G P V + L++ LC G ++ A L+ ++
Sbjct: 48 ARLRRLIARDDLAEAARLVDRATSRGE-APDVYLCTKLIRNLCRRGRTSDAARVLRA-AE 105
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + Y LV G CR G+ A R++ M + P TY +IRGLC G+
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVG 162
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
EA+ L++M+ + P + ++ L+ +VC +T
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 198/453 (43%), Gaps = 55/453 (12%)
Query: 38 YPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
Y N R +G Y ++ L ++NR+ ++++D+M C D +AT + +
Sbjct: 147 YDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK 206
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
+L+EA + + S+N ++ + +E +++ + + G ++ +
Sbjct: 207 LDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSV-VSDMVGRGLQPNVI 260
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++D C+ +A + M GC P+ ++ L++GL +D R+++A +
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM---- 316
Query: 213 FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
WR + +G V Y L+ LC G
Sbjct: 317 -WRWMVAEGWAPSTVSYNILIRGLCSVG-------------------------------- 343
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D++GA S++N G P++ +YS + G + + ++M G P++
Sbjct: 344 ----DLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V+Y + K M ++A +I++ +++ P +N L++ LCD A+
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENC-PPNTVTFNTLIRSLCDCRRVGRALGVFH 458
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + GCV NG TY L+ GL R+G +A ++ EM + TYN ++ GLC
Sbjct: 459 EMRRH-GCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 517
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA++++ +MI Q P+ +S+++ + C
Sbjct: 518 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 550
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 7/211 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +M+ + + + K +ID+M ++C F T IR+ ++ A+ +F +
Sbjct: 401 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 460
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ CV +++N L+ + +E +A H++ +G E+ + + N ++ LCQ R
Sbjct: 461 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS--LVTYNTVVSGLCQTR 518
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
S A+ +M QG P+ ++ ++ C + + A +L +M + +I
Sbjct: 519 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAM----NVVNCHRNI 574
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
++Y L+ LC+Q K+ DAM L K+L +G+
Sbjct: 575 LVYTILMAELCNQDKLVDAMTYLLKMLYEGI 605
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C N AV+ + ++ G N TY +LV LC++ R A ++L+EM + P
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY ++ LC + + EA L M P + ++++V ++C
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALC 235
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 50/452 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--- 138
+F + +Y + G L EAV++F F S N+LL +++K +K+E +F
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 215
Query: 139 -----LRSCYGW--------EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L Y + +V + + +L+++ + R D A+ + + M +G PD
Sbjct: 216 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMF---------------------------WRISQ 218
+Y IL+ G C ++R EA +L M +RI
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335
Query: 219 K----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G +++I+ TLL +C GK++ A++I+++++ KG++ P S+ + + + G
Sbjct: 336 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE-PDSQTYSLLIEGHCRG 394
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+++ A L++E R P++ +YS + L G + + +L EM G P+ V+Y
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ A K+G V+E+ +I E M + +P V YN L+ G C A A YL +M
Sbjct: 455 TTLMTAHAKEGRVEES-RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 513
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
++ N TYG +DG + G A R EML P V Y LI G C G
Sbjct: 514 ER-RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EA ++S+ L D+ +S L+ + N
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 209/456 (45%), Gaps = 15/456 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N VY +++ ++ R+ E + ++++M+ + + I + +A ++ EA +
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMD 159
+ + ++ + K ++E A F + SC V + L++
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---GVLPNVGIYTALIE 564
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ A VF+ + + D ++Y +L+ GL + +++EA + +F + +K
Sbjct: 565 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA----FGIFSELQEK 620
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + Y +L+ C QG + A Q+LE++ KG+ + + C GE IE
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE-IER 679
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK+L ++ RG P+ +Y+AM ++L+EM +G P +Y L
Sbjct: 680 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 739
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVG 398
K+ ++AL++ +E + KG F TV +N L++G C +G A L++M KQ
Sbjct: 740 FCCKEEKFEKALDLFQEMLEKG-FASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQF- 796
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY L+D C+ G EA R+ EM R+ P +TY L+ G +IG E
Sbjct: 797 -IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 855
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
EEM+++ PD + ++ + C + C+
Sbjct: 856 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 891
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 202/455 (44%), Gaps = 35/455 (7%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y + I S++ + ++M ++ I + + G + EA S
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F+ + + Q+++ L+ + + K+ A +F S +Q LL +
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF----------SELQEKGLLPNAF 627
Query: 162 ---------CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
C+ D A + +EM +G PD +Y+IL+ GLC + A +L
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL---- 683
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F I +G + V Y ++ C A Q+LE++L +G+ P + + + L C
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCC 742
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
E E A L E L +G S S++ + G++ E + +L+EM K F P+ V
Sbjct: 743 KEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLK 391
Y + + K GM+ EA + + EM + +PT + Y LL G + GN S V+ ++ +
Sbjct: 802 TYTSLIDHNCKAGMMGEA-KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR------SYWPCVETYNVLI 445
++K G + TY +++D CR+G +EA ++ +E+L++ + + T +V+
Sbjct: 861 MVAK--GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIA 918
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
RG G EA L M+ + + + LV
Sbjct: 919 RGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 953
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 194/408 (47%), Gaps = 18/408 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ I + R G + +A + + + N + W NTLL + K K+E A +
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW----NTLLNGVCKAGKMEKA-LE 367
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
++ V+ Q+ +LL++ C+ + A + EM + P +Y +++ GLC
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
L +L M G + V+Y TL+ A +G+++++ ILE++ +G+
Sbjct: 428 RCGNLQGTNAILREMV----MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 483
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGD 316
+ + + C + +E A++ + E L R P+ +Y A ID Y++ G + D
Sbjct: 484 PDVFCYNSLIIGFCK-AKRMEEARTYLMEMLERRLRPNAHTYGAF-IDGYSKAGEMEIAD 541
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ +EM + G P++ +Y A + K+G V EA V ++ + V+ Y++L+ G
Sbjct: 542 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF-ILSRRVLQDVQTYSVLIHG 600
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L G A ++ ++ G + N TY L+ G C+ G +AS++LEEM I+ P
Sbjct: 601 LSRNGKMHEAFGIFSELQEK-GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TYN+LI GLC G+ A +++ + P+ ++++V C
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 11/422 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I ++ R+ E + + +M + I Y++AG++ A F +
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + L++ KE + A +F R V +Q+ ++L+ L + +
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVF-RFILSRRVLQDVQTYSVLIHGLSRNGKM 607
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F E+ +G P+ +Y+ L+ G C +++A+ LL M KG DIV
Sbjct: 608 HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM----CIKGINPDIVT 663
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G+I+ A + + I +GL P + + ++ A L+ E
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGL-TPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L+RG P Y+ + E + + + EM KGF S V + + K G +
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKL 781
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETY 406
EA ++EE M++ F+P Y L+ C AG A ++L+ + V + +TY
Sbjct: 782 QEANHLLEE-MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV--MPTAKTY 838
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ G G E S + EEM+ + P TY V+I C G EA +E++
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 898
Query: 467 QA 468
+
Sbjct: 899 KG 900
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 166/387 (42%), Gaps = 46/387 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ I +R G+++EA +F L + + ++N+L+ K+ ++ A L
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 652
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
C + I + N+L+D LC+ + A ++F +++ +G P+ +Y ++ G C +
Sbjct: 653 CIKG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
A LL M R G D IY +L C + K + A+ + +++L KG + S
Sbjct: 712 PTAAFQLLEEMLLR----GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS 767
Query: 262 RRHRIDLCPCNDGEDIEG----------------------------------AKSLINEA 287
I+ C G+ E AK L E
Sbjct: 768 FNTLIE-GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R +P+ +Y+++ +N G + E + +EM KG P + Y + A ++G V
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 348 DEALEVIEEEMVKGT-----FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
EA ++ +E +VKG F + +++ +G AGN A L+ M K G V+N
Sbjct: 887 MEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK-FGWVSN 945
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEM 429
+ G LVDG ++ +L++M
Sbjct: 946 TTSLGDLVDGNQNGANSEDSDNLLKQM 972
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 42/305 (13%)
Query: 201 RLNEATHLLYSMFWRISQKGSG---EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ + LL +W + G+ +D+ + L LC+ A +++ I+R
Sbjct: 74 QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNS-D 132
Query: 258 APKSRRHRIDLC--PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+P + I C CN + S+I + L + SY M G +VE
Sbjct: 133 SPLAVLGSIVKCYRSCNGSPN-----SVIFDML-------MDSYRKM-------GFLVEA 173
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
V + F PSL+ + L L K V+ +V + M +P V Y ++
Sbjct: 174 VNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG-MCAHKVLPDVYTYTNMIS 232
Query: 376 GLCDAGNSAVAVMYLKKMSKQV----------------GCVANGETYGILVDGLCRDGRF 419
C GN A L +M ++ G V + TY IL++G C + R
Sbjct: 233 AHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 292
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +L EM+ P TYN LI G G +A +EM++ ++ +W++L
Sbjct: 293 REAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 352
Query: 480 VASVC 484
+ VC
Sbjct: 353 LNGVC 357
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 209/440 (47%), Gaps = 37/440 (8%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+ ++GIL ES + ++ + + I Y ++G++ EA+ + L +
Sbjct: 134 SQIMGILEESGAVIDV----------------TSYNVLISGYCKSGEIEEALRV---LDR 174
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS----CYGWEVKSRIQSLNLLMDVLCQC 164
+++ +L + KL+ A + R CY + + +L+D C+
Sbjct: 175 MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY-----PDVVTCTVLIDATCKE 229
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
A+ +F EM +GC PD +Y++L+KG C RL+EA L ++ G D
Sbjct: 230 SGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL----KKLPSYGCQPD 285
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++ + +L +LC G+ DAM++L +LRKG L + + I+ C G + A ++
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFL-CQKGL-LGKALNV 343
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G P+ S++ + N I + L+ M ++G +P +V Y L AL K
Sbjct: 344 LEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCK 403
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
DG VD+A+ ++ + KG P++ YN ++ GL G + +AV L++M + G +
Sbjct: 404 DGKVDDAVVILSQLSSKGC-SPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKPDL 461
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T +V GL R+G+ EA + + + P YN +I GLC + A+ +L +
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P + +++L+ +
Sbjct: 522 MVAKGCKPTEATYTTLIKGI 541
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 178/405 (43%), Gaps = 47/405 (11%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D + TA IR + + G+ A + L + V S+N L+ K ++E A
Sbjct: 113 DVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA---- 168
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
LR V + + ++ LC + A+ V CYPD + +L+ C
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ + +A L F + KG D+V Y L+ C G++ +A++ L+K+ G +
Sbjct: 229 ESGVGQAMKL----FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQ- 283
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + S++ + L + GR ++ K+
Sbjct: 284 -----------------------------------PDVISHNMILRSLCSGGRWMDAMKL 308
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L M KG PS+V + + L + G++ +AL V+E M K P R +N L++G C
Sbjct: 309 LATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEM-MPKHGHTPNSRSFNPLIQGFC 367
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A+ YL+ M + GC + TY IL+ LC+DG+ +A +L ++ + P +
Sbjct: 368 NGKGIDRAIEYLEIMVSR-GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 426
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+YN +I GL +GK AV LEEM + PD+ +S+V +
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL 471
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 188/421 (44%), Gaps = 11/421 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I +S I E V+D+M + + + + G+L +A+ +
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQL 208
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q C + L+ KES + A LF K + + N+L+ C+ R
Sbjct: 209 QSKCYPDVVTCTVLIDATCKESGVGQAMKLF-NEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+ +++ GC PD S++++++ LC+ R +A LL +M +KG +V
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATML----RKGCLPSVVT 323
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ LC +G + A+ +LE + + G P SR + +G+ I+ A +
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHG-HTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ RG P + +Y+ + L +G++ + +L ++ +KG PSL+ Y + L K G
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ A+E++EE KG P + ++ GL G A+ + + K+ N Y
Sbjct: 443 ELAVELLEEMCYKG-LKPDLITCTSVVGGLSREGKVREAMKFFHYL-KRFAIRPNAFIYN 500
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ GLC+ + A L +M+ + P TY LI+G+ G +A E+ S+
Sbjct: 501 SIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSR 560
Query: 468 A 468
Sbjct: 561 G 561
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 46/373 (12%)
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+N+ +S L+ +++ +LE FL + + L+ C+ R+ A
Sbjct: 76 LNFEESEIRHLRRLIRNGELEEGS-RFLEYMTNKGKSPDVIACTALIREFCKIGRTKNAS 134
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ ++ G D SY++L+ G C + EA +L M G + Y +
Sbjct: 135 QIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-------GVSPNAATYDAV 187
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
L +LCD+GK++ AMQ+L + L+ + D+ C D +S + +A+
Sbjct: 188 LCSLCDRGKLKQAMQVLGRQLQS--------KCYPDVVTCTVLIDATCKESGVGQAM--- 236
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
K+ +EMR KG P +V Y + K G +DEA+
Sbjct: 237 -------------------------KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+++ G P V +N++L+ LC G A+ L M ++ GC+ + T+ IL++
Sbjct: 272 RFLKKLPSYGC-QPDVISHNMILRSLCSGGRWMDAMKLLATMLRK-GCLPSVVTFNILIN 329
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
LC+ G +A VLE M + P ++N LI+G C+ A+ +LE M+S+ P
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389
Query: 472 DISVWSSLVASVC 484
DI ++ L+ ++C
Sbjct: 390 DIVTYNILLTALC 402
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 180/433 (41%), Gaps = 88/433 (20%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P ++T T L K+ A+K+F E
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNE------------------------------- 241
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
M+ C+ + I+ + + G+L+EA+ K L + C S N +L+
Sbjct: 242 ------MRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRS 295
Query: 125 MVKESK-LEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+ + ++A +L + C + + N+L++ LCQ AL+V + M
Sbjct: 296 LCSGGRWMDAMKLLATMLRKGCL-----PSVVTFNILINFLCQKGLLGKALNVLEMMPKH 350
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P+ S++ L++G CN + ++ A L M R G DIV Y LL ALC GK
Sbjct: 351 GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR----GCYPDIVTYNILLTALCKDGK 406
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ DA+ IL ++ KG + SLI+ + G+ + +
Sbjct: 407 VDDAVVILSQLSSKGC-----------------------SPSLISYNTVIDGLLKVGK-A 442
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+A++L L+EM KG P L+ + + L ++G V EA++ + +
Sbjct: 443 ELAVEL------------LEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF-HYLKR 489
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P +YN ++ GLC + +++A+ +L M + GC TY L+ G+ +G
Sbjct: 490 FAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK-GCKPTEATYTTLIKGITYEGLAE 548
Query: 421 EASRVLEEMLIRS 433
+AS++ E+ R
Sbjct: 549 DASKLSNELYSRG 561
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 7/223 (3%)
Query: 36 EKYPNYRH--NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
E P + H N + +I I E ++ M C + + +
Sbjct: 345 EMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKD 404
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G++++AV + LS C S+NT++ ++K K E A L CY +K + +
Sbjct: 405 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG-LKPDLIT 463
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
++ L + + A+ F + P+ Y+ ++ GLC ++ + A L M
Sbjct: 464 CTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMV 523
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
KG Y TL+ + +G +DA ++ ++ +GL
Sbjct: 524 ----AKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 204/438 (46%), Gaps = 9/438 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
N + +++G L N++T+ + ++ + CE + ++ T + ++ G + +SL
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + Q N ++++ ++ + K+ L+AA I L + I + N L+D LC
Sbjct: 191 LRIMEQGNTKPDVRTYSIVIDALCKDINLDAA-INLLNEMKQKNIPPNIFTYNSLIDGLC 249
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + + EM P+ ++ IL+ GLC + ++ +A ++ M +KG
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMI----EKGVE 305
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI+ Y ++ C +G++ A ++ + KG+K P + I + +++ A
Sbjct: 306 PDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK-PNIFSYSILINGYCKKKNLAKAMQ 364
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E +G P +YS + L GRI + K+ DEM G P + ++ L F
Sbjct: 365 LFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYF 424
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G+V+EA+ ++ ++ + + Y +++ GLC A +K+ +G + +
Sbjct: 425 KYGLVEEAM-LLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLP-SIGLIPD 482
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY +++ G CR+G F E +L +M TYNV+++G K E V +++
Sbjct: 483 VRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMK 542
Query: 463 EMISQAKLPDISVWSSLV 480
EM + D + L+
Sbjct: 543 EMAGRGFSFDATTTGVLI 560
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 178/416 (42%), Gaps = 60/416 (14%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLF----KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
DS+ +Y +++ A S+ K FN V +FNTLL + E+K+ A
Sbjct: 97 DSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVV----TFNTLLGGLFAENKVTDAV 152
Query: 136 ILFLRSCYGWEVKSRIQSLN-----LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+LF + V+ +I N +M+ L + ++ L + + M+ PD +Y
Sbjct: 153 VLFKKL-----VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYS 207
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
I++ LC D L+ A +LL M QK +I Y +L+ LC G+
Sbjct: 208 IVIDALCKDINLDAAINLLNEM----KQKNIPPNIFTYNSLIDGLCKLGQW--------- 254
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
E K+L++E + P++ ++S + L EG
Sbjct: 255 ---------------------------EKVKTLLSEMVNLNINPNVHTFSILIDGLCKEG 287
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ + D+V+ M KG P ++ Y A + G VD A V KG P + Y
Sbjct: 288 KVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG-IKPNIFSY 346
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+IL+ G C N A A+ ++S Q G + TY ++ GL GR +A ++ +EML
Sbjct: 347 SILINGYCKKKNLAKAMQLFGEIS-QKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P + ++ L+ G G EA++ ++ + +IS ++ ++ +C N
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN 461
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 176/386 (45%), Gaps = 9/386 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSL 154
L++AVSLF + + + F+ L K M+ A LF G + I L
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSI--L 100
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N++ + C R D A V G + +++ L+ GL + ++ +A L +
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL-- 158
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ +K + V+Y T++ L +G + + +L +I+ +G P R + I +
Sbjct: 159 -VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKD 216
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+++ A +L+NE + P++ +Y+++ L G+ + +L EM P++ +
Sbjct: 217 INLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTF 276
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ L K+G V++A EV+ + KG P + Y+ ++ G C G A +
Sbjct: 277 SILIDGLCKEGKVEDADEVMRHMIEKGV-EPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G N +Y IL++G C+ +A ++ E+ + P TY+ ++ GL +G+
Sbjct: 336 DK-GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRI 394
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
+A +EM+ PDI + S+L+
Sbjct: 395 GDAKKIFDEMLRVGPTPDICLHSTLL 420
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 206/470 (43%), Gaps = 68/470 (14%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE--------- 132
+F + +Y + G L EAV++F F S N+LL +++K +K+E
Sbjct: 147 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 206
Query: 133 AAHI----------LFLRSCYGWEVKS---------------RIQSLNLLMDVLCQCRRS 167
AH + C VK + + N+++ LC+ R
Sbjct: 207 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLL 266
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-------------- 213
D A+ + + M +G PD +Y IL+ G C ++R EA +L M
Sbjct: 267 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 326
Query: 214 -------------WRISQK----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+RI + G +++I+ TLL +C GK++ A++I+++++ KG+
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ P S+ + + + G+++ A L++E R P++ +YS + L G + +
Sbjct: 387 E-PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+L EM G P+ V+Y + A K+G V+E+ +I E M + +P V YN L+ G
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES-RMILERMREQGILPDVFCYNSLIIG 504
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A A YL +M ++ N TYG +DG + G A R EML P
Sbjct: 505 FCKAKRMEEARTYLMEMLER-RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V Y LI G C G EA ++S+ L D+ +S L+ + N
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 198/433 (45%), Gaps = 29/433 (6%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y + I S++ + ++M ++ I + + G + EA S
Sbjct: 527 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 586
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F+ + + Q+++ L+ + + K+ A +F S +Q LL +
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF----------SELQEKGLLPNAF 636
Query: 162 ---------CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
C+ D A + +EM +G PD +Y+IL+ GLC + A +L
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL---- 692
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F I +G + V Y ++ C A Q+LE++L +G+ P + + + L C
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCC 751
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
E E A L E L +G S S++ + G++ E + +L+EM K F P+ V
Sbjct: 752 KEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLK 391
Y + + K GM+ EA + + EM + +PT + Y LL G + GN S V+ ++ +
Sbjct: 811 TYTSLIDHNCKAGMMGEA-KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
++K G + TY +++D CR+G +EA ++ +E+L++ V Y+ LI+ LC
Sbjct: 870 MVAK--GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Query: 452 GKQYEAVMWLEEM 464
+ +E + L E+
Sbjct: 928 EEFFEVLKLLNEI 940
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 209/456 (45%), Gaps = 15/456 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N VY +++ ++ R+ E + ++++M+ + + I + +A ++ EA +
Sbjct: 457 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMD 159
+ + ++ + K ++E A F + SC V + L++
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---GVLPNVGIYTALIE 573
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ A VF+ + + D ++Y +L+ GL + +++EA + +F + +K
Sbjct: 574 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA----FGIFSELQEK 629
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + Y +L+ C QG + A Q+LE++ KG+ + + C GE IE
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE-IER 688
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK+L ++ RG P+ +Y+AM ++L+EM +G P +Y L
Sbjct: 689 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 748
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVG 398
K+ ++AL++ +E + KG F TV +N L++G C +G A L++M KQ
Sbjct: 749 FCCKEEKFEKALDLFQEMLEKG-FASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQF- 805
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY L+D C+ G EA R+ EM R+ P +TY L+ G +IG E
Sbjct: 806 -IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 864
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
EEM+++ PD + ++ + C + C+
Sbjct: 865 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 194/408 (47%), Gaps = 18/408 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ I + R G + +A + + + N + W NTLL + K K+E A +
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW----NTLLNGVCKAGKMEKA-LE 376
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
++ V+ Q+ +LL++ C+ + A + EM + P +Y +++ GLC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
L +L M G + V+Y TL+ A +G+++++ ILE++ +G+
Sbjct: 437 RCGNLQGTNAILREMVM----NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGD 316
+ + + C + +E A++ + E L R P+ +Y A ID Y++ G + D
Sbjct: 493 PDVFCYNSLIIGFCK-AKRMEEARTYLMEMLERRLRPNAHTYGAF-IDGYSKAGEMEIAD 550
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ +EM + G P++ +Y A + K+G V EA V ++ + V+ Y++L+ G
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF-ILSRRVLQDVQTYSVLIHG 609
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L G A ++ ++ G + N TY L+ G C+ G +AS++LEEM I+ P
Sbjct: 610 LSRNGKMHEAFGIFSELQEK-GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TYN+LI GLC G+ A +++ + P+ ++++V C
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 191/438 (43%), Gaps = 11/438 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I ++ R+ E + + +M + I Y++AG++ A F +
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + L++ KE + A +F R V +Q+ ++L+ L + +
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVF-RFILSRRVLQDVQTYSVLIHGLSRNGKM 616
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F E+ +G P+ +Y+ L+ G C +++A+ LL M KG DIV
Sbjct: 617 HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM----CIKGINPDIVT 672
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G+I+ A + + I +GL P + + ++ A L+ E
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGL-TPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L+RG P Y+ + E + + + EM KGF S V + + K G +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKL 790
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETY 406
EA ++EE M++ F+P Y L+ C AG A ++L+ + V + +TY
Sbjct: 791 QEANHLLEE-MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV--MPTAKTY 847
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ G G E S + EEM+ + P TY V+I C G EA +E++
Sbjct: 848 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 907
Query: 467 QAKLPDISVWSSLVASVC 484
+ ++ + +L+ ++C
Sbjct: 908 KGMPMSVAAYDALIQALC 925
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 177/402 (44%), Gaps = 15/402 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ I +R G+++EA +F L + + ++N+L+ K+ ++ A L
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
C + I + N+L+D LC+ + A ++F +++ +G P+ +Y ++ G C +
Sbjct: 662 CIKG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
A LL M R G D IY +L C + K + A+ + +++L KG + S
Sbjct: 721 PTAAFQLLEEMLLR----GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS 776
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
I+ C G+ ++ A L+ E + + IP+ +Y+++ G + E ++ E
Sbjct: 777 FNTLIE-GYCKSGK-LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 834
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ + P+ Y + L G + E + EE + KG P Y +++ C G
Sbjct: 835 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG-IEPDKMTYYVMIDAYCREG 893
Query: 382 NSAVAVMYLKKMSKQV---GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
N VM K+ ++ G + Y L+ LC+ F E ++L E+ + +
Sbjct: 894 N----VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGL 949
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
T +V+ RG G EA L M+ + + + LV
Sbjct: 950 PTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 27/285 (9%)
Query: 201 RLNEATHLLYSMFWRISQKGSG---EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++ + LL +W + G+ +D+ + L LC+ A +++ I+R
Sbjct: 65 QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNS-D 123
Query: 258 APKSRRHRIDLC--PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+P + I C CN + S+I + L + SY M G +VE
Sbjct: 124 SPLAVLGSIVKCYRSCNGSPN-----SVIFDML-------MDSYRKM-------GFLVEA 164
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
V + F PSL+ + L L K V+ +V + M +P V Y ++
Sbjct: 165 VNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG-MCAHKVLPDVYTYTNMIS 223
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
C GN A L +M ++ GC N TY +++ GLCR EA + M+ +
Sbjct: 224 AHCKVGNVKDAKRVLLEMGEK-GCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLV 282
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P + TY++LI G C + EA + L EMI P+ +++L+
Sbjct: 283 PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 11/442 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I + ++ + + +M + E + F T I Y + Q+ +A L++ ++
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +F L+ + +++ A LF ++K + N++++ C+
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLF-DEMVERKIKPTEVTYNVMIEGYCKAHNM 549
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + ++M G PD +Y L+ GLC+ R++ A + + +K + +
Sbjct: 550 DKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL----HKKNLKLNEMC 605
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y LL C QG++ +A+ +++++G+ H + + +D++ L+ +
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQRGINMDLVC-HAVLIDGAMKQQDMKRLFGLLKKM 664
Query: 288 LIRGGIPSLASYSAMAIDLYN-EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P Y++M ID Y+ EG + + LD M T+ +P++V Y A + L K G
Sbjct: 665 YDQGLRPDSVIYTSM-IDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D A + E+ M+ P Y L L GN A +M K G +AN TY
Sbjct: 724 IDRAGHLFEK-MLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK--GLLANTATY 780
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+ G C+ GR +EA++VL EM +P TY+ +I C G AV + M+
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLR 840
Query: 467 QAKLPDISVWSSLVASVCCNTA 488
+ PD ++ L+ C N A
Sbjct: 841 KGVEPDSVAFNLLIYGCCVNGA 862
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 177/405 (43%), Gaps = 43/405 (10%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T F+ L+ ++ +++ A ++ LR G + +++L+ +++ L + R+ L VF
Sbjct: 148 TLGFDFLVHSYLQNTRVFDA-VVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
E G PD + +++ LC + A + W S + IV Y L+
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKE---KILWMESNRFD-LSIVTYNVLIHG 262
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC G + +A+++ + + KGLK + L C + +G L+NE + G +P
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGI-CLMNEMVELGFVP 321
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---- 350
+ A+ S + L +G I ++ ++ GF P+L +Y A + AL K +D+A
Sbjct: 322 TEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLY 381
Query: 351 ---------------------------LEVIEE---EMVKGTFVPTVRVYNILLKGLCDA 380
L+V E M++ T+ YN L+ G C
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441
Query: 381 GN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G+ SA +Y K +++ G T+ L+ G C+D + +A ++ EM + P V
Sbjct: 442 GDLSAAEFLYTKMINE--GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVY 499
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ LI GLCS + EA +EM+ + P ++ ++ C
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYC 544
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 10/247 (4%)
Query: 29 KIFKEAKEKYP-NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
++F K+ Y R + +Y SMI S+ + E +D M + C + +
Sbjct: 656 RLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFM 715
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G+++ A LF+ + N + ++ L + KE ++ A L G +
Sbjct: 716 NGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKG--L 773
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + N+L+ C+ R A V EM G +PD +Y ++ C + A
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--RRHR 265
L +M +KG D V + L++ C G + A ++ +L +GLK P+ + +
Sbjct: 834 LWDTML----RKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK-PRQILQLQK 888
Query: 266 IDLCPCN 272
DL CN
Sbjct: 889 RDLGVCN 895
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 280 AKSLINEALIRGGIPS------LASY------SAMAIDLY-----NEGRIVEGDKVLDEM 322
A SL++ L+RG P L S+ S + D R+ + VL M
Sbjct: 115 ANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLM 174
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P + A L L + EV +E + G P + +++ LC+ +
Sbjct: 175 LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGV-KPDPYTCSAVIRSLCELKD 233
Query: 383 SAVA---VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A +++++ + V TY +L+ GLC+ G LEA V + + + V
Sbjct: 234 FCRAKEKILWMESNRFDLSIV----TYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVV 289
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY L+ G C + + + + + EM+ +P + S LV
Sbjct: 290 TYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 200/446 (44%), Gaps = 48/446 (10%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
R+ P Y ++I ++N++ V+D+MK + I ++ G+L+
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+ +F+ L + NC ++ L++ + + +
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGI--------------------------- 224
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D+A+ + EM +G PD +Y+ +++G+C + +++A LL S+ S
Sbjct: 225 ---------DVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL----SS 271
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDI 277
+G DI+ Y LL L +GK + +++ +++ G K P H I + C DG+ +
Sbjct: 272 RGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK-PNVVTHSILIGTLCRDGK-V 329
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A +L+ +G P Y + EGR+ + L+ M + G P +V Y
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+A L + G D+ALEV E+ G P V YN L L +G+ A+ + K+ Q
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGC-PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ- 447
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + TY L+ LCRDG EA +L +M Y P V +YN+++ GLC + + +A
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDA 507
Query: 458 VMWLEEMISQAKLPDISVWSSLVASV 483
+ L M + P+ + + L+ +
Sbjct: 508 IEVLAAMTEKGCQPNETTYILLIEGI 533
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 177/376 (47%), Gaps = 8/376 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG ++ E+ +++ D+CE + I G ++ A+ L +
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
T ++N +++ M KE ++ A L LRS K I + N+L+ L +
Sbjct: 235 LSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL-LRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ EM GC P+ ++ IL+ LC D ++ EA +LL SM +KG D
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM----KEKGLKPDAY 349
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +G++ A + LE ++ G + I C G+ + A + +
Sbjct: 350 CYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGK-ADQALEVFEK 408
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P+++SY+ + L++ G +++ ++ +G P + Y + ++ L +DGM
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGM 468
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA+E++ + M G + P V YNI+L GLC + A+ L M+++ GC N TY
Sbjct: 469 VDEAIELLVD-MQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK-GCQPNETTY 526
Query: 407 GILVDGLCRDGRFLEA 422
+L++G+ G EA
Sbjct: 527 ILLIEGIGFSGLRAEA 542
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 20/374 (5%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLAL 171
++N L+ +K ++LE A+ + R +KSR + + N+++ C + DLAL
Sbjct: 140 AYNALISGFIKANQLENANRVLDR------MKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+F+E+ C P +Y IL++ D ++ A LL M KG D + Y +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEML----SKGLEPDTLTYNAI 249
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIR 290
+ +C + + A ++L + +G K P + I L + G+ EG K LI+E +
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCK-PDIITYNILLRTLLSRGKWSEGEK-LISEMISI 307
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ ++S + L +G++ E +L M+ KG P Y+ +A ++G +D A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E +E M+ +P + YN ++ GLC G + A+ +K+ +VGC N +Y L
Sbjct: 368 TEFLEY-MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD-EVGCPPNVSSYNTLF 425
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
L G A ++ ++L + P TYN LI LC G EA+ L +M S
Sbjct: 426 SALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYR 485
Query: 471 PDISVWSSLVASVC 484
P++ ++ ++ +C
Sbjct: 486 PNVVSYNIILLGLC 499
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 10/329 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C+ + + +L+ + M +G PD L+KG N R + +AT ++ I
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-----EI 129
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGE 275
++ D+ Y L+ ++++A ++L+++ +G P + I + C+ G+
Sbjct: 130 LERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGF-LPDVVTYNIMIGSFCSRGK 188
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A + E L P++ +Y+ + +G I K+LDEM +KG P + Y
Sbjct: 189 -LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A + + K+ MVD+A E++ +G P + YNILL+ L G + + +M
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGC-KPDIITYNILLRTLLSRGKWSEGEKLISEMI- 305
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+GC N T+ IL+ LCRDG+ EA +L M + P Y+ LI G C G+
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
A +LE MIS LPDI +++++A +C
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLC 394
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + + A+ + + KEK + + Y +I R+
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK--GLKPDAYCYDPLIAGFCREGRLDLAT 368
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E ++ M D C + T + R G+ ++A+ +F+ L + C S+NTL +
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
W R ++L +++ +L QG PD
Sbjct: 429 -------------------WSSGDRYRALEMILKLLN-----------------QGIDPD 452
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS-GEDIVIYRTLLFALCDQGKIQDA 244
+Y+ L+ LC D ++EA LL M Q G ++V Y +L LC + DA
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDM-----QSGRYRPNVVSYNIILLGLCKVNRANDA 507
Query: 245 MQILEKILRKG 255
+++L + KG
Sbjct: 508 IEVLAAMTEKG 518
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 187/394 (47%), Gaps = 27/394 (6%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK---EMVKESKLEAAHILFL 139
F I + G+LN+A + +++ ++NTL+ +M K K+ A + L
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAI-L 224
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + N+L+D C+ + A+ VF EM+ QG P+ +Y+ L+ GLCN+
Sbjct: 225 KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
++NEAT L M + +I+ + LL C ++ A ++ + + ++G+
Sbjct: 285 GKVNEATALRDQMVNSCLK----PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + + C D E++E A +L L +G P +++Y+ + L +G + ++
Sbjct: 341 VTTYNILIDAYCKD-ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLV 399
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM TK L+ Y + +L G + +AL +++E KG P+ YN ++ G C
Sbjct: 400 SEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG-LKPSQLTYNTMIDGYCK 458
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
GN A+ +M K VG +AN TY +L+ G C+ + +A+ +L EML + P
Sbjct: 459 EGNLRAALNLRSQMEK-VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
TY ++ EEM+ + +PDI
Sbjct: 518 TYEIVT----------------EEMMEKGFVPDI 535
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 167/372 (44%), Gaps = 48/372 (12%)
Query: 117 SFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALH 172
SFN ++ + K KL +A I+ G V + + + N L+D C+ + A
Sbjct: 165 SFNIVINGLCKVGKLNKAGDIIEDMKVRG--VSANVITYNTLIDGYCKMGKIGKMYKADA 222
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ +EM G P+ +++IL+ G C D+ ++ A + F ++++G ++V Y +L+
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV----FAEMNRQGVKPNVVTYNSLI 278
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC+ GK+ +A + ++++ LK
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLK----------------------------------- 303
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++ +++A+ + + ++ D+M +G P++ Y + A KD +++A
Sbjct: 304 -PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ + KG P V YN L+ GLC G+ A + +M + A+ TY IL+D
Sbjct: 363 LYRIMLGKGV-CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK-HLKADLITYNILIDS 420
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC G +A R+L+EM + P TYN +I G C G A+ +M +L +
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 473 ISVWSSLVASVC 484
++ ++ L+ C
Sbjct: 481 VATYNVLIKGFC 492
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S+ S + + L G I + + V EM + P+L+ + + L K G +++A ++I
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY-----LKKMSKQVGCVANGETYGIL 409
E+ V+G + YN L+ G C G + MY LK+M + G N T+ IL
Sbjct: 187 EDMKVRGVSANVI-TYNTLIDGYCKMG--KIGKMYKADAILKEM-RADGICPNEVTFNIL 242
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+D A +V EM + P V TYN LI GLC+ GK EA ++M++
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 470 LPDISVWSSLVASVCCN 486
P+I ++L+ C N
Sbjct: 303 KPNIITHNALLNGFCKN 319
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 165/326 (50%), Gaps = 12/326 (3%)
Query: 164 CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CR + +LH+ + M +G PD L+KG R + +A ++ I +K
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-----EILEKFG 150
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D+ Y L+ C +I DA ++L+++ K +P + + I + C+ G+ ++ A
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGK-LDLA 208
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++++ L P++ +Y+ + EG + E K+LDEM ++G P + Y +
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K+GMVD A E+I +KG P V YNILL+ L + G + KM + C
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCD 326
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LCRDG+ EA +L+ M + P +Y+ LI C G+ A+ +
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
LE MIS LPDI +++++A++C N
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKN 412
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 190/436 (43%), Gaps = 43/436 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + NRI + V+D+M+ + I + G+L+ A+ + L
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
NC ++ L++ + E ++ A + L +K + + N ++ +C+
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEA-LKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + + ++ +GC PD SY+IL++ L N + E L+ MF S+K ++V
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF---SEK-CDPNVVT 331
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC GKI++AM +L+ + KGL
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLT------------------------------ 361
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P SY + EGR+ + L+ M + G P +V Y LA L K+G
Sbjct: 362 ------PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+ALE+ + G P YN + L +G+ A+ + +M G + TY
Sbjct: 416 DQALEIFGKLGEVGC-SPNSSSYNTMFSALWSSGDKIRALHMILEMVSN-GIDPDEITYN 473
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ LCR+G +A +L +M + P V TYN+++ G C + +A+ L+ M+
Sbjct: 474 SMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533
Query: 468 AKLPDISVWSSLVASV 483
P+ + ++ L+ +
Sbjct: 534 GCRPNETTYTVLIEGI 549
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 166/330 (50%), Gaps = 7/330 (2%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L++ C+ R D A V M + PD +Y+I++ LC+ +L+ A +L +
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
Q ++ Y L+ A +G + +A+++L+++L +GLK + I C +G
Sbjct: 218 DNCQP----TVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
++ A +I ++G P + SY+ + L N+G+ EG+K++ +M ++ P++V Y
Sbjct: 274 M-VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ L +DG ++EA+ +++ KG P Y+ L+ C G VA+ +L+ M
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
GC+ + Y ++ LC++G+ +A + ++ P +YN + L S G +
Sbjct: 392 SD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ + EM+S PD ++S+++ +C
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLC 480
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 7/319 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ L+ G C R+++AT +L R+ K D V Y ++ +LC +GK+
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVL----DRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 207
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L+++L + P + I + ++ A L++E L RG P + +Y+ +
Sbjct: 208 ALKVLDQLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ EG + +++ + KG P ++ Y L AL G +E E + +M
Sbjct: 267 RGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG-EKLMTKMFSEKC 325
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+IL+ LC G A M L K+ K+ G + +Y L+ CR+GR A
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEA-MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LE M+ P + YN ++ LC GK +A+ ++ P+ S ++++ +++
Sbjct: 385 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444
Query: 484 CCNTADLNVCRKTLEQLSS 502
+ + LE +S+
Sbjct: 445 WSSGDKIRALHMILEMVSN 463
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 25/421 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS 141
F T I Y G+++ A S+ + + T + TL+K + K+ EA H
Sbjct: 86 FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ + S +L++ LC+ + AL V +++D + + Y ++ LC ++
Sbjct: 146 ARGFRLNE--VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKL 203
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ EA Y ++ ++ K D+V + L++ C G+ ++A + +++ +
Sbjct: 204 VTEA----YELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVC 259
Query: 262 RRHRIDLCPCNDG----------------EDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ + C +G + AK + N R P + SY+ +
Sbjct: 260 TFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKR 319
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + E + +EMR KG P V Y + + L K + A E++++ +G
Sbjct: 320 LCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPAD 379
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ Y L LC AV +KK+ Q G N TY IL+DGLC++GRF A +
Sbjct: 380 VI-TYTSFLHALCKNHQVDKAVALVKKIKDQ-GIQPNINTYNILIDGLCKEGRFENAQVI 437
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+++LI+ Y V TYN++I GLC G EA+ LE+M PD+ + +++ ++
Sbjct: 438 FQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFK 497
Query: 486 N 486
N
Sbjct: 498 N 498
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 187/409 (45%), Gaps = 29/409 (7%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
T I+ G+++EA+ ++ S+ L+ + K + AA + LR
Sbjct: 121 LTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAA-LQVLRKI 179
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V + + + ++D LC+ + A ++ +M + PD ++ L+ G C +
Sbjct: 180 DGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQF 239
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA + +F + D+ + L+ ALC +G ++ +L ++++ + K++
Sbjct: 240 KEA----FGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAK 295
Query: 263 -------RHRID------------LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
+ R+ LC + ++ A SL NE +G P +YS++
Sbjct: 296 HVFNIIGKRRVTPDVHSYTIIIKRLCKI---KMVDEALSLFNEMRCKGITPDKVTYSSLI 352
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L RI ++LD+M +G ++ Y + L AL K+ VD+A+ ++++ +G
Sbjct: 353 DGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG-I 411
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + YNIL+ GLC G A + + + + G TY I+++GLC +G F EA
Sbjct: 412 QPNINTYNILIDGLCKEGRFENAQVIFQDLLIK-GYKVTVWTYNIMINGLCLEGLFDEAM 470
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+LE+M P V TY +IR L + ++A L EMI++ L +
Sbjct: 471 TLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 166/359 (46%), Gaps = 23/359 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++ ++ K N N +Y+++I L + +TE E+ QM F+
Sbjct: 172 ALQVLRKIDGKLVNT--NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSAL 229
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE-SKLEAAHILFL------ 139
I + GQ EA LF + N +FN L+ + KE S E ++L +
Sbjct: 230 IYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVN 289
Query: 140 -----RSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ + K R+ S +++ LC+ + D AL +F EM +G PD+ +Y
Sbjct: 290 QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYS 349
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC R++ A LL M R G D++ Y + L ALC ++ A+ +++K
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHAR----GQPADVITYTSFLHALCKNHQVDKAVALVKK 405
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
I +G++ + + + C +G E A+ + + LI+G ++ +Y+ M L EG
Sbjct: 406 IKDQGIQPNINTYNILIDGLCKEGR-FENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEG 464
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
E +L++M G P +V YE + ALFK+ +A +++ E + +G V +
Sbjct: 465 LFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEI 523
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-ETYGILVDGLCRDGRFLEAS 423
P++ +N +L L + N+ + Q+ + T+ +++ C G A
Sbjct: 44 PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA-KLPDISVWSSLVAS 482
VL ++L Y P T LI+GLC GK +EA+ + + +I++ +L ++S + L+
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVS-YGILING 162
Query: 483 VCC---NTADLNVCRK 495
+C A L V RK
Sbjct: 163 LCKMGETRAALQVLRK 178
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 180/422 (42%), Gaps = 62/422 (14%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+ + ++S+L+ A + FLR G E + S N LM C+ D+A F M
Sbjct: 241 LIDGLCRQSRLQDA-VTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHL---------------------------LYSMF 213
G PD SY+IL+ GLC + EA L S
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 214 WRISQK----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
W++ Q+ G D+V Y L+ C G I+++ ++ EK+L +GLK +
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID------------------------ 305
C G I+ A L++E + G P L +YS A++
Sbjct: 420 LCKSGR-IDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAI 478
Query: 306 ---LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L+ +G I E D + +++Y + K G + EA+ ++ + KG
Sbjct: 479 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG- 537
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
PT+ +N L+ G C G A AV L + K G V TY L++G C +G
Sbjct: 538 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI-KVHGLVPTSVTYTTLMNGYCEEGDMHSM 596
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+L EM ++ P TY V+++GLC G+ +E+V L+ M ++ PD +++++ S
Sbjct: 597 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 656
Query: 483 VC 484
C
Sbjct: 657 FC 658
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 170/369 (46%), Gaps = 18/369 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQ 175
++ LL + K +++ A IL ++ + L D+L R + + A+ +++
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILL----------HEMEVIGLKPDLLTYSRGAVEEAIELYE 461
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
EM + YP+ ++ GL ++EA +Y F +++ E+I++Y ++
Sbjct: 462 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQ--MY--FDSVTKSDVAEEIILYNIMIDGY 517
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
G I +A++ ++I+ KG+ + + C G+ E K L++ + G +P+
Sbjct: 518 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK-LLDTIKVHGLVPT 576
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ + EG + +L EM K P+ + Y + L K+G + E++++++
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 636
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+G F P YN +++ C A + A +M Q + TY +L++GLC
Sbjct: 637 YMYARGLF-PDQITYNTVIQSFCKAHDLQKAFQLHNQM-LQHSLQPSPVTYNVLINGLCV 694
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G +A R+L + +S Y +I+ C+ G A+++ +M+ + I
Sbjct: 695 YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRD 754
Query: 476 WSSLVASVC 484
+S+++ +C
Sbjct: 755 YSAVINRLC 763
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 150/374 (40%), Gaps = 42/374 (11%)
Query: 27 ALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A+++++E +K YPN V +++I L E I+E + D + + ++
Sbjct: 456 AIELYEEMCSKRIYPN----SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYN 511
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCY 143
I YA+ G + EAV +K + + +FN+L+ K+ KL EA +L +
Sbjct: 512 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G S + LM+ C+ + EM+ + P + +Y +++KGLC + RL+
Sbjct: 572 GLVPTS--VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 629
Query: 204 EATHLLYSMFWR-------------------------------ISQKGSGEDIVIYRTLL 232
E+ LL M+ R + Q V Y L+
Sbjct: 630 ESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLI 689
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC G ++DA ++L + + ++ K I C G D++ A ++ + RG
Sbjct: 690 NGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG-DVQNALVFFHQMVERGF 748
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
S+ YSA+ L I + M T G P + L A + G + E
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808
Query: 353 VIEEEMVKGTFVPT 366
+ M+K +P
Sbjct: 809 IF-AMMIKCGLLPV 821
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 162/369 (43%), Gaps = 44/369 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
Q+ LL D LC+ + A+ V + M G PD SY L+ LC + A L+
Sbjct: 98 FQATQLLYD-LCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVD 156
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + G + V Y +L+ LC G + ++Q+L+++++KGL P + + L
Sbjct: 157 KM----EEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEA 211
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--- 327
+ A L++E + +GG P+L SY+ + L EGR + ++ E+ +KGF
Sbjct: 212 AYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPN 271
Query: 328 ----------------W----------------PSLVMYEAKLAALFKDGMVDEALEVIE 355
W PS V Y + +L G + ALEV+E
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLE 331
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E M++ F PT YN ++ LC G + V L +M + C N TY + LC
Sbjct: 332 E-MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYR-HCNPNEGTYNAIAT-LCE 388
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G EA +++ + + + E Y ++I LC G Y A L EM PD
Sbjct: 389 EGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448
Query: 476 WSSLVASVC 484
+SSL+ +C
Sbjct: 449 YSSLIRGLC 457
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 200/453 (44%), Gaps = 46/453 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + +++D+M+ + + +R G L +++ L L
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLI 194
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q V +++ LL+ KE + A L L + + S N+L+ LC+ R+
Sbjct: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKL-LDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A+ +F+E+ +G P+ SY+IL++ LCN+ R EA LL M + V
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM----NGDERSPSTVT 309
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +L G+ + A+++LE+++R K
Sbjct: 310 YNILIGSLALHGRTEHALEVLEEMIRARFK------------------------------ 339
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P+ +SY+ + L +G++ K LD+M + P+ Y A +A L ++GMV
Sbjct: 340 ------PTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMV 392
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA +I + + T Y I++ LC GN+ A L +M+K G + TY
Sbjct: 393 QEAFSII-QSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTK-YGFTPDSFTYS 450
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ GLC +G EA + M + P E YN LI G C + A+ E M+ +
Sbjct: 451 SLIRGLCMEGMLNEAIEIFSVME-ENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGK 509
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
LP+ + ++ LV + + ++++ K L +L
Sbjct: 510 GYLPNETTYTILVEGI-IHEKEMDLATKVLREL 541
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 4/283 (1%)
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+KG D+ LL+ LC K++ A++++E ++ G+ S + C G ++
Sbjct: 90 EKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKG-NV 148
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A L+++ G + +Y+++ L G + + ++LD + KG P+ Y
Sbjct: 149 GYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFL 208
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L A +K+ DEA ++++E + KG P + YN+LL GLC G + A+ +++ +
Sbjct: 209 LEAAYKERGADEASKLLDEIIAKGG-EPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSK- 266
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G N +Y IL+ LC +GR+ EA+ +L EM P TYN+LI L G+ A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ LEEMI P S ++ ++A +C + L++ K L+Q+
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIAHLCKD-GKLDLVVKCLDQM 368
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 206/467 (44%), Gaps = 16/467 (3%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGP-VYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
+ +P ALK F A R P +Y +I L N + + V D M+ D
Sbjct: 102 RAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHP 161
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL 137
+ +R + ++ A + +++ C ++ T++ + K +L EA +L
Sbjct: 162 NVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVL 221
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ S N ++ LC+ R V +M +G P+ +Y ++ C
Sbjct: 222 -------AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFC 274
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
L A +L R+ G ++V + L+ L D G++ DA+ + ++ +G
Sbjct: 275 KAGELRMACAILA----RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGW- 329
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
AP + + I + D++GA S++N G P++ +YS + G +
Sbjct: 330 APSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAIS 389
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ ++M G P++V+Y + K M ++A +I++ +++ P +N L++ L
Sbjct: 390 IWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENC-PPNTVTFNTLIRSL 448
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
CD A+ +M + GCV NG TY L+ GL R+G +A ++ EM
Sbjct: 449 CDCRRVGRALGVFHEMRRH-GCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 507
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TYN ++ GLC EA++++ +MI Q P+ +S+++ + C
Sbjct: 508 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 554
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 209/487 (42%), Gaps = 55/487 (11%)
Query: 38 YPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
Y N R +G Y ++ L ++NR+ ++++D+M C D +AT + +
Sbjct: 151 YDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK 210
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
+L+EA + + S+N ++ + +E +++ + + G ++ +
Sbjct: 211 LDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSV-VSDMVGRGLQPNVI 264
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++D C+ +A + M GC P+ ++ L++GL +D R+++A +
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM---- 320
Query: 213 FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
WR + +G V Y L+ LC G ++ A IL + + G P R + +
Sbjct: 321 -WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGC-FPNVRTYSTLIDGF 378
Query: 272 NDGEDIEGA-----------------------------------KSLINEALIRGGIPSL 296
+ D+ GA KSLI++ L+ P+
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+++ + L + R+ V EMR G P+ Y + LF++G +AL ++ E
Sbjct: 439 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 498
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
G + V YN ++ GLC S A++++ KM Q G N T+ ++ C++
Sbjct: 499 MQSHGIELSLV-TYNTVVSGLCQTRMSREAMVFVGKMIVQ-GIQPNAFTFSAIIHAYCKE 556
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G A+ +L M + + + Y +L+ LC+ K +A+ +L +M+ + P+ W
Sbjct: 557 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 616
Query: 477 SSLVASV 483
+ LV V
Sbjct: 617 NVLVRGV 623
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 214/467 (45%), Gaps = 15/467 (3%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K S ++ L F + + P++ + + S++ ES + + ++ +M G
Sbjct: 10 KMHSQVSELYDFMRQEGRLPSFGYVRMIVESLV----ESKKFDNVLDLFKEMVGLGFRPD 65
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
V+ A+ + G L A+ LF+ + + V +N L+ + KE ++ A LF
Sbjct: 66 KLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
V +R+ + N L+D C+ D+A+ + + M + P +++ L+ GLC
Sbjct: 126 EMSVRNLVPNRV-TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL--CDQGKIQDAMQILEKILRKGLK 257
RR+ EA M I G D Y + L D G A+ + + + KG+K
Sbjct: 185 RRIEEAR----CMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGA-GAALDLYREAIGKGVK 239
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ C +G+ +E A+ ++ + G +P Y+ + G +
Sbjct: 240 IDNYTCSILLNGLCKEGK-VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+++M ++G P+ + + + + + M+D+A E +++ + KG P+V YNIL+ G
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG-IAPSVETYNILIDGY 357
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ L++M + G N +YG L++ LC+DG+ LEA VL +M+ R P
Sbjct: 358 GRLCVFSRCFQILEEMEEN-GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN+LI G C++GK EA+ + +EM I ++SL+ +C
Sbjct: 417 ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 219/462 (47%), Gaps = 21/462 (4%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A+++F+ K + PN VY +IG L + RI + +++ +M + F
Sbjct: 85 AMELFETMKRRKVVPNVF----VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFN 140
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCY 143
T I Y +AG+++ A+ L + + + +FN+LL + K ++E A + C
Sbjct: 141 TLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN 200
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+ S+ + +L + AL +++E +G D + IL+ GLC + ++
Sbjct: 201 GFVPDGFTYSI-IFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+A +L S+ + G VIY T++ C G + A+ +E++ +GL+ P
Sbjct: 260 KAEEVLKSLV----EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLR-PNCIA 314
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK---VLD 320
+ + + I+ A+ + + + +G PS+ +Y+ + ID Y GR+ + +L+
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL-IDGY--GRLCVFSRCFQILE 371
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM G P+++ Y + + L KDG + EA E++ +MV +P +YN+L+ G C
Sbjct: 372 EMEENGEKPNVISYGSLINCLCKDGKILEA-EMVLRDMVGRGVLPNANIYNMLIDGSCTV 430
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ + +MSK G A TY L+ GLC+ G+ EA + + + P V T
Sbjct: 431 GKLREALRFFDEMSKN-GIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVIT 489
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
YN LI G + G + + E M P I+ + L++
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG 531
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 218/470 (46%), Gaps = 25/470 (5%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K AL +++EA K + + + ++ L + ++ + +EV+ +
Sbjct: 216 LLKSDDGAGAALDLYREAIGK--GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTLLKEMVKESKLE 132
+ ++ T + Y + G ++ A+ + + + NC+ +FN+++ + + ++
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI----AFNSVIDKFCEMQMID 329
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDV---LCQCRRSDLALHVFQEMDFQGCYPDRESY 189
A +++ G + +++ N+L+D LC R + +EM+ G P+ SY
Sbjct: 330 KAE-EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR---CFQILEEMEENGEKPNVISY 385
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
L+ LC D ++ EA +L M R G + IY L+ C GK+++A++ +
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGR----GVLPNANIYNMLIDGSCTVGKLREALRFFD 441
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ + G+ A + + C G+ ++ A+ + G P + +Y+++ N
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGK-LKEAEEMFFLITSTGHCPDVITYNSLISGYSNA 500
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + ++ + M+ G P++ + ++ K+G+ + E + EM++ P V
Sbjct: 501 GNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGI--KLKETLFNEMLQMNLSPDRVV 558
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN ++ + G+ A K+M +G + +TY L+ G ++G+ E ++++M
Sbjct: 559 YNAMIHCYQETGHVQKAFSLQKEMV-DMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ P +TY++LI+G C + A +W EM+ LP++ + + L
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNEL 667
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 149/328 (45%), Gaps = 9/328 (2%)
Query: 160 VLCQCRRSDLALHVFQEMDF---QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+L C S + V + DF +G P ++++ L ++ + L M
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL- 60
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
G D ++Y + A G ++ AM++ E + R+ + P + + + +
Sbjct: 61 ---GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKV-VPNVFVYNVLIGGLCKEKR 116
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
I A+ L E +R +P+ +++ + G + + + M+ + PS++ + +
Sbjct: 117 IRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L+ L K ++EA ++ E G FVP Y+I+ GL + + A A + L + +
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNG-FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIG 235
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + T IL++GLC++G+ +A VL+ ++ P YN ++ G C IG
Sbjct: 236 KGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDR 295
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A++ +E+M S+ P+ ++S++ C
Sbjct: 296 AILTIEQMESRGLRPNCIAFNSVIDKFC 323
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 164/427 (38%), Gaps = 44/427 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N + S+I E I + +E + +M G + I Y R +
Sbjct: 309 RPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQ 368
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + + S+ +L+ + K+ K+ A ++ LR G V N+L+D
Sbjct: 369 ILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMV-LRDMVGRGVLPNANIYNMLIDGS 427
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C + AL F EM G +Y+ L+KGLC +L EA MF+ I+ G
Sbjct: 428 CTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEE----MFFLITSTGH 483
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D++ Y +L+ + G Q +++ E + + GLK + H
Sbjct: 484 CPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH----------------- 526
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
P ++ S I L + + +EM P V+Y A +
Sbjct: 527 ------------PLISGCSKEGIKLK--------ETLFNEMLQMNLSPDRVVYNAMIHCY 566
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ G V +A +++EMV P + YN L+ G G + + M K G +
Sbjct: 567 QETGHVQKAFS-LQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM-KAKGLIP 624
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+TY +L+ G C F A EML + P V N L GL G+ EA
Sbjct: 625 EADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSIC 684
Query: 462 EEMISQA 468
EMI+
Sbjct: 685 SEMIANG 691
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 180/403 (44%), Gaps = 11/403 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R + Q NEA+ LF ++ + + F LL + K K + I
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV-INLCDHLQIMG 102
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + NLLM+ CQ + LA +M G PD ++ L+ G C R+ EA
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
SM ++ + G D+V+Y T++ +LC G + A+ + +++ G++ +
Sbjct: 163 ----SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
CN G A SL+ R P + +++A+ EG+ ++ +++ +EM
Sbjct: 219 VNGLCNSGR-WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y + + +G VDEA ++ KG F P V Y L+ G C A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDA 336
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +MS Q G N TY L+ G + G+ A V M+ R P + TYNVL+
Sbjct: 337 MKIFYEMS-QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 447 GLCSIGKQYEAVMWLEEMISQ---AKLPDISVWSSLVASVCCN 486
LC GK +A+M E+M + P+I ++ L+ +C N
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 52/424 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S+I NR+ E +++QM + ++ T I + + G +N A+SLF +
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +L+ + + A L LR ++K + + N L+D + +
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSL-LRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A ++ EM P+ +Y L+ G C + ++EA MF+ + KG D+V
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ----MFYLMETKGCFPDVV 318
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ C K+ DAM+I ++ +KGL ++
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG----------------------NTITYT 356
Query: 287 ALIRG----GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
LI+G G P++A +V M ++G P++ Y L L
Sbjct: 357 TLIQGFGQVGKPNVAQ------------------EVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 343 KDGMVDEALEVIEEEMVK--GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+G V +AL + E+ + P + YN+LL GLC G A+M + M K+
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR-EMD 457
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
TY I++ G+C+ G+ A + + + P V TY +I GL G ++EA +
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 461 LEEM 464
+M
Sbjct: 518 FRKM 521
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S + + + G P + +++++ R+ E ++++M G P +VMY +
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L K+G V+ AL + ++ M P V +Y L+ GLC++G A L+ M+K+
Sbjct: 186 SLCKNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KI 243
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ T+ L+D ++G+FL+A + EM+ S P + TY LI G C G EA
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 460 WLEEMISQAKLPDISVWSSLVASVC-CNTAD 489
M ++ PD+ ++SL+ C C D
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 12/353 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L ++ + + DQM+ ++ + + +G+ +A SL + +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ +FN L+ VKE K A L+ + I + L++ C
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELY-NEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F M+ +GC+PD +Y L+ G C +++++A + Y M SQKG + +
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM----SQKGLTGNTI 353
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLIN 285
Y TL+ GK A ++ ++ +G+ P R + + L C C +G+ ++ A +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV-PPNIRTYNVLLHCLCYNGK-VKKALMIFE 411
Query: 286 EALIR---GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ R G P++ +Y+ + L G++ + V ++MR + ++ Y + +
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
K G V A+ + KG P V Y ++ GL G A + +KM +
Sbjct: 472 KAGKVKNAVNLFCSLPSKGV-KPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + E +++ M+ C + + I + + ++++A+ +F +
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQ T ++ TL++ + K A +F V I++ N+L+ LC +
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF-SHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 167 SDLALHVFQEM---DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------- 212
AL +F++M + G P+ +Y++L+ GLC + +L +A + M
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 213 --------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
F + KG ++V Y T++ L +G +A + K+
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 253 RKGL 256
G+
Sbjct: 523 EDGV 526
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 189/414 (45%), Gaps = 22/414 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA---HILF 138
+ T I+ +++EA LF + + C ++ TL+K + + A H
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200
Query: 139 LRSCYGWEV--KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP----------DR 186
L +E+ K + + N+++D LC+ R D A +F+EM QG P D
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDM 260
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++++L+ LC + ++ EA LL M + G D+V Y +L+ C G + A +
Sbjct: 261 VTFNVLIDTLCKEGKVIEAKKLLGVMI----ESGIVPDLVTYNSLIEGFCMVGDLNSARE 316
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ + KG + P + + + + +E A L NE L+ G P++ +Y ++ +
Sbjct: 317 LFVSMPSKGCE-PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+ G++ + K+ M+ G + Y L L K+ + EA+++ E + F
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE-LKSSNFKLE 434
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ N L+ GLC AG A +K+S + G N TY I++ G CR+G+ +A+ ++
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSNE-GHEPNVVTYTIMIHGFCREGQVDKANVLI 493
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++M P + TYN L+RG K E V L M + PD S +V
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 70/389 (17%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+LN+L++ LC R F + +G P+ +Y+ L+KGLC + R++EAT L
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL---- 161
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-- 270
F R+ + G D+V Y TL+ LC G I A+++ +++L R+ I+ P
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND------ISRYEINCKPNV 215
Query: 271 ----------CNDGEDIEGAKSLI----------NEALIRGGIPSLASYSAMAIDLYNEG 310
C G + E AK L NE L +G P + +++ + L EG
Sbjct: 216 ITYNIIVDGLCKVGREDE-AKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAA------------LF---------------- 342
+++E K+L M G P LV Y + + LF
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334
Query: 343 -------KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
K V+EA+++ E ++ G P V Y+ LLKG+ AG A M K
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGK-RPNVITYDSLLKGIFLAGKVDDAKKLFSVM-K 392
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
G N TYGI +DGLC++ EA ++ E+ ++ +E N LI GLC GK
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
A E++ ++ P++ ++ ++ C
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFC 481
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 193/450 (42%), Gaps = 19/450 (4%)
Query: 46 PVYASMIGILSESNRITEMKEVI---DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
P +S +LS +I +V +QM+ + +L E +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
F + + ++NTL+K + E ++ A LFLR + + L+ LC
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLGCTPDVVTYGTLIKGLC 185
Query: 163 QCRRSDLALHVFQEM--DFQ----GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR- 215
++AL + QEM D C P+ +Y+I++ GLC R +EA L M +
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245
Query: 216 -----ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ +G D+V + L+ LC +GK+ +A ++L ++ G+ + +
Sbjct: 246 MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G D+ A+ L +G P + SY+ + ++ E K+ +EM G P+
Sbjct: 306 CMVG-DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 364
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y++ L +F G VD+A ++ G Y I L GLC + M L
Sbjct: 365 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHG-IAENSYTYGIFLDGLC-KNDCLFEAMKL 422
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K E L+DGLC+ G+ A + E++ + P V TY ++I G C
Sbjct: 423 FTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCR 482
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G+ +A + +++M + PDI +++L+
Sbjct: 483 EGQVDKANVLIQKMEANGCTPDIITYNTLM 512
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 224/504 (44%), Gaps = 72/504 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L +R E +++ +M KGD C + I G++++A +LF +
Sbjct: 239 YNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEM 298
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR--------------------SCYG-W 145
Q V ++N+++ + K ++ A ++ + SC G W
Sbjct: 299 VQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRW 358
Query: 146 EVKSR-------------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ ++ I + N LMD LC+ +RS A +F + +G PD SY IL
Sbjct: 359 KEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSIL 418
Query: 193 MKGLCNDRRLNEATHLLYSM-------------------------------FWRISQKGS 221
+ G + R + +L +SM F + +G
Sbjct: 419 LHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGV 478
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y T++ ALC G++ DAM+ L +++ GLK H + C G+ I+ AK
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIK-AK 537
Query: 282 SLINEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L++E + +G P++ +S++ L NEGR++ V + + G P + + + +
Sbjct: 538 ELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDG 597
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGC 399
G +D+A V++ + GT P V Y+ L+ G +G ++ ++M K+V
Sbjct: 598 YCLVGKMDKAFGVLDAMVSAGT-EPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK- 655
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
TY +++DGL R GR A ++ EM+ + TY ++++GLC EA+
Sbjct: 656 -PTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
++ + +I++ ++++ ++
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHAL 738
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 11/335 (3%)
Query: 155 NLLMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N + LC +R+D AL + M GC PD SY+ ++K LC R EA +L M
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRM- 262
Query: 214 WRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
KG G D+V Y ++ L +G+I A + ++++KG+ + I C
Sbjct: 263 ----TKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALC 318
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
++ A+ ++ + P +Y+AM GR E K+ EM +G P +
Sbjct: 319 K-ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDI 377
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V + + + +L K EA E+ KG P + Y+ILL G G
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATKG-HKPDIISYSILLHGYATEGRFVDMNNLFH 436
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M+ G VA+ + IL++ + G EA + EM + P V TY +I LC +
Sbjct: 437 SMTDN-GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ +A+ L +MIS P+ V+ SL+ C +
Sbjct: 496 GRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTH 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 133/320 (41%), Gaps = 11/320 (3%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDR---RLNEATHLLYSMFWRISQKGSGEDIV 226
A H+F E+ Q + + + L R ++A L ++F RI ++ +G +V
Sbjct: 102 AHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVV 161
Query: 227 -----IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
Y L+ C + ++LR GL+ + C C E
Sbjct: 162 PLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALS 221
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG-DKVLDEMRTKGFWPSLVMYEAKLAA 340
L++ G +P SY+ + L R E D +L + G P +V Y +
Sbjct: 222 MLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
LF +G + +A + E + KG VP V YN ++ LC A A + L++M
Sbjct: 282 LFMEGEISKACNLFNEMVQKGV-VPNVVTYNSIVHALCKARAMDKAELVLRQMFDN-SIQ 339
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY ++ G GR+ EA+++ +EM P + T+N L+ LC + EA
Sbjct: 340 PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399
Query: 461 LEEMISQAKLPDISVWSSLV 480
+ ++ PDI +S L+
Sbjct: 400 FHSIATKGHKPDIISYSILL 419
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 41/309 (13%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N ++S+I L R+ ++V + + F + I Y G++++A
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + +++TL+ K +++ ILF R VK + +L++D L
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF-REMLCKRVKPTTVTYSLVLDGL 668
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ R+ A +F EM G +Y I+++GLC + +EA ++F ++
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI----TLFHKLGAMNL 724
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+I I T++ AL + ++A + + GL
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDLFASVSASGL------------------------- 759
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+P+ ++Y M I+L EG + E D + M G PS + + L
Sbjct: 760 -----------VPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRML 808
Query: 342 FKDGMVDEA 350
+ G + +A
Sbjct: 809 LQKGEIVKA 817
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 223/486 (45%), Gaps = 19/486 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV- 67
++ T + + ++ K P AL+ FK ++K + H Y M+ IL + +
Sbjct: 76 ISKTTVLRTLRLIKDPSKALRFFKWTQQK--GFSHTPESYFIMLEILGRERNLNVARNFL 133
Query: 68 --IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
I++ + + +D F + IR+YA AG E++ LF+ + +FN+L+ +
Sbjct: 134 FSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSIL 193
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + A ++ + V + N+L+ C+ D F+EM+ C D
Sbjct: 194 LKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDAD 253
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC ++ A +L+ M + +G ++V Y TL+ C + ++++A+
Sbjct: 254 VVTYNTLVDGLCRAGKVRIARNLVNGMGKKC--EGLNPNVVTYTTLIRGYCMKQEVEEAL 311
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
+LE++ +GLK P + + + ++ K ++ GG P +++ + I
Sbjct: 312 VVLEEMTSRGLK-PNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTI-I 369
Query: 305 DLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEEEMV 359
L+ G + E KV + M+ Y + +L + G D A E+ E+E++
Sbjct: 370 HLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL 429
Query: 360 KGTF--VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
F P YN + + LC+ G + A ++++ K+ + ++Y ++ G C++G
Sbjct: 430 LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKR--GTQDPQSYTTVIMGHCKEG 487
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ +L ML R + P +E Y+ LI G K A LE+M+ + P S W
Sbjct: 488 AYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWH 547
Query: 478 SLVASV 483
S++A +
Sbjct: 548 SVLAKL 553
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 137/334 (41%), Gaps = 42/334 (12%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL F+ +G ESY I+++ L +R LN A + L+S+ ED +
Sbjct: 94 ALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLED-RFFN 152
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ + + G +++M++ + + KS+
Sbjct: 153 SLIRSYAEAGLFKESMKLFQTM-----------------------------KSI------ 177
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDGMVD 348
PS+ +++++ L GR +V DEM T G P Y + K+ MVD
Sbjct: 178 -AVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVD 236
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV-GCVANGETYG 407
E E M V YN L+ GLC AG +A + M K+ G N TY
Sbjct: 237 EGFRFFRE-MESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYT 295
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ G C EA VLEEM R P + TYN L++GLC K + LE M S
Sbjct: 296 TLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSD 355
Query: 468 AKL-PDISVWSSLVASVCCNTADLNVCRKTLEQL 500
PD +++++ CC +L+ K E +
Sbjct: 356 GGFSPDTFTFNTIIHLHCC-AGNLDEALKVFESM 388
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/514 (20%), Positives = 207/514 (40%), Gaps = 85/514 (16%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKN 105
+ S++ IL + R KEV D+M G D+ + IR + + ++E F+
Sbjct: 185 TFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFRE 244
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ FNC ++NTL+ + + K+ A L + C G + + + L+ C
Sbjct: 245 MESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEG--LNPNVVTYTTLIRGYC 302
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + AL V +EM +G P+ +Y+ L+KGLC +L++ +L M S G
Sbjct: 303 MKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM---KSDGGFS 359
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D + T++ C G + +A+++ E + + + A + + C G D + A+
Sbjct: 360 PDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKG-DYDMAEQ 418
Query: 283 LINEALIR-------GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG--------- 326
L +E + G P ASY+ + L G+ + ++V+ ++ +G
Sbjct: 419 LFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTT 478
Query: 327 -------------------------FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
F P + +Y+ + + A E +E+ M+K
Sbjct: 479 VIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK-MLKS 537
Query: 362 TFVPTVRVYNILLKGLCDAG----NSAVAVMYLKKMSKQ------------VGCVANGET 405
++ P ++ +L L + G +S V VM L+K +Q G +
Sbjct: 538 SYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERA 597
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYW--PC--------------VETYNVLIRGLC 449
+ I ++ L ++G +++ V + +L R C ++ N I LC
Sbjct: 598 FEI-INLLYKNGYYVKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLC 656
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
I K EA E++ +++ L+A++
Sbjct: 657 KINKVSEAFSLCYELVENGLHQELTCLDDLIAAL 690
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 209/442 (47%), Gaps = 17/442 (3%)
Query: 45 GPVYASMIGILS---ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
GP ++ +L+ NRI+E ++DQM + F T + + + +EAV+
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + C ++ ++ + K + + A L + G ++++ + + ++D L
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSL 250
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D AL++F EMD +G PD +Y L+ LCN R ++A+ LL M R
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER----KI 306
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V + +L+ A +GK+ +A ++ ++++++ + + + C + ++ A+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEAQ 365
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ + + +P + +Y+ + ++V+G ++ +M +G + V Y +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVG 398
F+ D A +++ ++MV P + YN LL GLC G + V YL+K +
Sbjct: 426 FQASDCDNA-QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME-- 482
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ TY I+ +G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 483 --PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
+M LPD +++L+
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLI 562
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I R QL+ A+++ + + + N+LL +++ A + +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA-VALVDQMVEMG 165
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + L+ L Q ++ A+ + + M +GC PD +Y ++ GLC + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 207 HLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+LL M +KG E D+VIY T++ +LC + DA+ + ++ KG++
Sbjct: 226 NLLNKM-----EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C CN G A L+++ L R P++ +++++ EG+++E +K+ DEM +
Sbjct: 281 LISCLCNYGR-WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V Y + + +DEA ++ MV +P V YN L+ G C A
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTL-MVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ + MS++ G V N TY L+ G + A V ++M+ P + TYN L+
Sbjct: 399 GMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A++ E + PDI ++ + +C
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 11/346 (3%)
Query: 143 YGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+G VKSR I + L+ + + ++ DL + ++M+ G + +Y+I++ LC
Sbjct: 53 FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+L+ A +L M + G G IV +LL C +I +A+ ++++++ G +
Sbjct: 113 RSQLSFALAILGKMM----KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ- 167
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + + A +L+ +++G P L +Y A+ L G +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L++M +V+Y + +L K VD+AL + E KG P V Y+ L+ LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLC 286
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G + A L M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P +
Sbjct: 287 NYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN LI G C + EA M+S+ LPD+ +++L+ C
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 41/423 (9%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ + + +++ L + N+ +E ++++M C+ + I + G+ + A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSC- 142
+L + + ++T++ + K ++ A LF L SC
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 143 --YG-WEVKSRIQS-------------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
YG W SR+ S N L+D + + A +F EM + P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ G C RL+EA + F + K D+V Y TL+ C K+ D M+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQI----FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ + R+GL + + + D + A+ + + + G P++ +Y+ + L
Sbjct: 402 LFRDMSRRGL-VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G++ + V + ++ P + Y + K G V++ ++ +KG P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV-KPD 519
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V YN ++ G C G A KM K+ G + + TY L+ RDG ++ ++
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 427 EEM 429
+EM
Sbjct: 579 KEM 581
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 205/444 (46%), Gaps = 16/444 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L RI + V+D+M C ++ + R G AV +
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++L C + N +L + + + EA H+L +G E + S N ++ LC
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE--PDVVSYNAVLKGLC 238
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+R + +EM C P+ +++ L+ LC + +L M + G
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV----EHGCT 294
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E E +
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEE 353
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV---LDEMRTKGFWPSLVMYEAKLA 339
L+ E + +++ + +D + + +V D+V L++M +G P ++ Y +
Sbjct: 354 LLAEMFDKDCPLDDVTFNIL-VDFFCQNGLV--DRVIELLEQMLERGCMPDVITYTTVIN 410
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K+G++DEA+ +++ G P Y I+LKGLC A A + +M +Q GC
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GC 468
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+
Sbjct: 469 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 528
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
L M+++ P+ ++SS+ +++
Sbjct: 529 LLNVMVNKGMSPNTIIYSSIASAL 552
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 183/391 (46%), Gaps = 24/391 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + EV+ QM C ++AT I + G L A + +
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ +NTLLK + + E L F + C +V + N+L+D C
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-----TFNILVDFFC 378
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q D + + ++M +GC PD +Y ++ G C + ++EA LL SM + G
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----TACGCK 434
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y +L LC + DA ++ +++++G P + I+ C G +E A
Sbjct: 435 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-CKKGL-VEQAI 492
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + +AL
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 342 FKDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
++G +++ +++ I++ ++ V +YN ++ LC G + A+ +L M G
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAV----LYNAVISSLCKRGETERAIEFLAYMVSS-G 607
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEM 429
CV N TY IL+ GL +G EA +L E+
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTEL 638
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 11/367 (2%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+N ++ + +LE+A R V + ++ LC R AL V EM
Sbjct: 93 YNAMVAGYCRAGQLESAR----RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+GC P YH++++ C A +L + R G D+ +L A+CD
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHAR----GCALDVGNCNLVLNAICD 204
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
QG + +A+ +L + G + P + L + + L+ E + P++
Sbjct: 205 QGSVDEALHLLRDLPSFGCE-PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 263
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+++ + L G +VL +M G P + MY + + K+G ++ A E++
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR- 322
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M P V YN LLKGLC A L +M + C + T+ ILVD C++G
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDDVTFNILVDFFCQNG 381
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+LE+ML R P V TY +I G C G EAVM L+ M + P+ ++
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 478 SLVASVC 484
++ +C
Sbjct: 442 IVLKGLC 448
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 187/434 (43%), Gaps = 45/434 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + R ++E++++M +C F T I R G + +
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 289
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + + T++ + KE LE AH IL YG +K + N L+ LC R
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG--LKPNVVCYNTLLKGLCSAER 347
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM + C D +++IL+ C + ++ LL M ++G D++
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML----ERGCMPDVI 403
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C +G I +A+ +L+ + G K
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCK----------------------------- 434
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ SY+ + L + R V+ + ++ +M +G + + + + L K G+
Sbjct: 435 -------PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y
Sbjct: 488 VEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIY 545
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+ L R+GR + ++ + + + YN +I LC G+ A+ +L M+S
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605
Query: 467 QAKLPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 606 SGCVPNESTYTILI 619
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 172/403 (42%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +R G++ +A+++ + + C ++ +L+ + +A + L
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA-VRVLED 182
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + NL+++ +C D ALH+ +++ GC PD SY+ ++KGLC +R
Sbjct: 183 LHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 242
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ M + +IV + TL+ LC G + ++L +++ G
Sbjct: 243 WGCVQELMEEMV----RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT---- 294
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P + Y+ + + EG + ++L+
Sbjct: 295 --------------------------------PDIRMYATIIDGICKEGHLEVAHEILNR 322
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + G P++V Y L L +E E++ E K + V +NIL+ C G
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNG 381
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ L++M ++ GC+ + TY +++G C++G EA +L+ M P +Y
Sbjct: 382 LVDRVIELLEQMLER-GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++++GLCS + +A + +MI Q + +++L+ +C
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++ G C +L A L ++ + Y ++ ALC +G+I DA+ +L
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV-------PVPPNAYTYFPVVRALCARGRIADALAVL 145
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ R+G H I C G A ++ + RG + + + + + +
Sbjct: 146 DEMPRRGCAPIPPMYHVILEAACRGG-GFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 204
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD---GMVDEALEVIEEEMVKGTFVP 365
+G + E +L ++ + G P +V Y A L L G V E +E EMV+ P
Sbjct: 205 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME----EMVRMACPP 260
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ +N L+ LC G L +M + GC + Y ++DG+C++G A +
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEH-GCTPDIRMYATIIDGICKEGHLEVAHEI 319
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
L M P V YN L++GLCS + E L EM + D ++ LV C
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379
Query: 486 N 486
N
Sbjct: 380 N 380
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 32/459 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ +I L + +R+ E KE+++++ + + + I Y ++G+++ A+ + K +
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++N+L+ +VK+ KL A L + + + I LL QC
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG---QCDE 545
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D A +F+ M+ G PD +Y +L LC R EA YS I +KG
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA----YSF---IVRKGVALT 598
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y TL+ G A ++E+++ +G P S + + L + + A ++
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQKRLNEALPIL 657
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ +RG ++ +Y+ + ++ EG+ ++ +EM + G PS Y + + K+
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +++A ++I + M + P V YNIL+ G G A LK+M C N
Sbjct: 718 GRLEDAEDLILK-MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYW 775
Query: 405 TYGILVDGLCRDG----RFLEAS------------RVLEEMLIRSYWPCVETYNVLIRGL 448
TY +L+ L + R ++ S ++LE M+ P V TY+ LI G
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
C G+ EA + L+ M + P+ +++ L+ CC+T
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDT 873
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 193/446 (43%), Gaps = 16/446 (3%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN R + +I L +S R+ + + + D M + + I Y++ G++N+
Sbjct: 286 PNVR----AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+ + + + + C ++NTL+ + + EA +L G+ + + L+
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGF--TPTVVTFTNLI 399
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ C + D AL + +M C D + + L+ L RL EA LL IS
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNE----ISA 455
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +++ Y +++ C GK+ A+++L+ + R G + P + + + + +
Sbjct: 456 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ-PNAWTYNSLMYGLVKDKKLH 514
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L+ + G IP++ +Y+ + +E ++ + M G P Y
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL K G +EA I + V T V Y L+ G AGN+ A +++M + G
Sbjct: 575 DALCKAGRAEEAYSFIVRKGVALTKV----YYTTLIDGFSKAGNTDFAATLIERMIDE-G 629
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C + TY +L+ LC+ R EA +L++M +R + Y +LI + GK A
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
EM S P + ++ + S C
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYC 715
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 226/537 (42%), Gaps = 71/537 (13%)
Query: 9 LTPTYLSQIIKKQKS---PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
+T +++ + + + + P TAL F E + +RH +A+++ +LS + +
Sbjct: 52 VTAAHVADLFRAESTAPEPATALAFF-EWLARRDGFRHTADSHAALLHLLSRRRAPAQYE 110
Query: 66 EVIDQMKGDSCECKD-SVFATAIRTYARAGQLNEAVS------LFKNLSQFNCVNW---- 114
++ M S +D V A AI+ R G A+S ++L++F+ +
Sbjct: 111 RLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRV 170
Query: 115 ------------TQSFNTLLKEMVKESKLEAAHILF-------------------LRSCY 143
T ++NT++K KE L AH F L C
Sbjct: 171 YSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCR 230
Query: 144 GWEVKSRI---------------QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
E++ S +L+ LC+ + AL +F M GC P+ +
Sbjct: 231 TGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRA 290
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
+ L+ GLC R+ +A L +M Q G ++ Y ++ G++ DA++I
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAM----PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
E + + G + + C+ + E A+ L+N A+ G P++ +++ +
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCD--QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + ++ ++M + L ++ + +L K + EA E++ E G VP V
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG-LVPNVI 463
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y ++ G C +G +A+ LK M + GC N TY L+ GL +D + +A +L +
Sbjct: 464 TYTSIIDGYCKSGKVDIALEVLKMMERD-GCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
M P V TY L++G C ++ L EM+ Q L PD ++ L ++C
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCD-EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
F I Y A + ++A+ + + C Q F L+ ++K+ +L EA +L
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S G + + + ++D C+ + D+AL V + M+ GC P+ +Y+ LM GL D+
Sbjct: 454 SANG--LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 511
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+L++A LL M + G +++ Y TLL CD+ +A ++ E + + GLK
Sbjct: 512 KLHKAMALLTKM----QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD- 566
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
E A +++ +AL + G ++
Sbjct: 567 -----------------EHAYAVLTDALCKAG---------------------RAEEAYS 588
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KG + V Y + K G D A +IE + +G P Y++LL LC
Sbjct: 589 FIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQ 647
Query: 381 GNSAVAVMYLKKMS-KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L +MS + + C Y IL+D + R+G+ A R+ EM + P
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFA--YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY V I C G+ +A + +M + PD+ ++ L+
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 206/522 (39%), Gaps = 90/522 (17%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQ 70
Q+ K + L KEAKE NG V Y S+I +S ++ EV+
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M+ D C+ + + + + +L++A++L + + + ++ TLL+ E
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 131 LEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRR----------------------- 166
+ A LF + G +K + +L D LC+ R
Sbjct: 548 FDNAFRLFEMMEQNG--LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 605
Query: 167 ---------SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-- 215
+D A + + M +GC PD +Y +L+ LC +RLNEA +L M R
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 216 -----------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++ G Y + + C +G+++DA
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM---- 302
++ K+ R+G+ AP + I + C I+ A S + + P+ +Y +
Sbjct: 726 LILKMEREGV-APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 303 ---------AIDLYNEGRIVEGD---KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
++D ++E D ++L+ M G P++ Y + +A K G ++EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+++ KG P +Y +L+K CD A+ ++ MS + G E+Y +LV
Sbjct: 845 CLLLDHMCGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS-ECGFQPQLESYRLLV 902
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
GLC +G F + + ++L Y + +L GL G
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 14/320 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L + R+ E ++DQM +C + I R G+ + A ++ +
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ + KE +LE A L L+ V + + N+L+D
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVAPDVVTYNILIDGCGHMGY 754
Query: 167 SDLALHVFQEMDFQGCYPDRESY-----HILMKGLCNDRRLNEAT-------HLLYSMFW 214
D A + M C P+ +Y H+L L R ++ + + + +
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R+ + G + Y +L+ C G++++A +L+ + KGL +P + + + C D
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL-SPNEDIYTLLIKCCCDT 873
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A S ++ G P L SY + + L NEG + + ++ G+ V +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933
Query: 335 EAKLAALFKDGMVDEALEVI 354
+ L K G VD +++
Sbjct: 934 KILNDGLLKAGYVDICFQML 953
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 32/459 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ +I L + +R+ E KE+++++ + + + I Y ++G+++ A+ + K +
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++N+L+ +VK+ KL A L + + + I LL QC
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG---QCDE 545
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D A +F+ M+ G PD +Y +L LC R EA YS I +KG
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA----YSF---IVRKGVALT 598
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y TL+ G A ++E+++ +G P S + + L + + A ++
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQKRLNEALPIL 657
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ +RG ++ +Y+ + ++ EG+ ++ +EM + G PS Y + + K+
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +++A ++I + M + P V YNIL+ G G A LK+M C N
Sbjct: 718 GRLEDAEDLILK-MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYW 775
Query: 405 TYGILVDGLCRDG----RFLEAS------------RVLEEMLIRSYWPCVETYNVLIRGL 448
TY +L+ L + R ++ S ++LE M+ P V TY+ LI G
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
C G+ EA + L+ M + P+ +++ L+ CC+T
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDT 873
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 193/446 (43%), Gaps = 16/446 (3%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN R + +I L +S R+ + + + D M + + I Y++ G++N+
Sbjct: 286 PNVR----AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+ + + + + C ++NTL+ + + EA +L G+ + + L+
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGF--TPTVVTFTNLI 399
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ C + D AL + +M C D + + L+ L RL EA LL IS
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN----EISA 455
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +++ Y +++ C GK+ A+++L+ + R G + P + + + + +
Sbjct: 456 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ-PNAWTYNSLMYGLVKDKKLH 514
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L+ + G IP++ +Y+ + +E ++ + M G P Y
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL K G +EA I + V T V Y L+ G AGN+ A +++M + G
Sbjct: 575 DALCKAGRAEEAYSFIVRKGVALTKV----YYTTLIDGFSKAGNTDFAATLIERMIDE-G 629
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C + TY +L+ LC+ R EA +L++M +R + Y +LI + GK A
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
EM S P + ++ + S C
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYC 715
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 216/519 (41%), Gaps = 68/519 (13%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD-SV 82
P TAL F E + +RH +A+++ +LS + + ++ M S +D V
Sbjct: 70 PATALAFF-EWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRV 128
Query: 83 FATAIRTYARAGQLNEAVS------LFKNLSQFNCVNW----------------TQSFNT 120
A AI+ R G A+S ++L++F+ + T ++NT
Sbjct: 129 SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188
Query: 121 LLKEMVKESKLEAAHILF-------------------LRSCYGWEVKSRI---------- 151
++K KE L AH F L C E++
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 152 -----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S +L+ LC + AL +F M GC P+ ++ L+ GLC R+ +A
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L +M Q G ++ Y ++ G++ DA++I E + + G + +
Sbjct: 309 LLFDAM----PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C+ + E A+ L+N A+ G P++ +++ + + + ++ ++M +
Sbjct: 365 IYGLCD--QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 422
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
L ++ + +L K + EA E++ E G VP V Y ++ G C +G +A
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG-LVPNVITYTSIIDGYCKSGKVDIA 481
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ LK M + GC N TY L+ GL +D + +A +L +M P V TY L++
Sbjct: 482 LEVLKMMERD-GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540
Query: 447 GLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
G C ++ L EM+ Q L PD ++ L ++C
Sbjct: 541 GQCD-EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
F I Y A + ++A+ + + C Q F L+ ++K+ +L EA +L
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S G + + + ++D C+ + D+AL V + M+ GC P+ +Y+ LM GL D+
Sbjct: 454 SANG--LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 511
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+L++A LL M + G +++ Y TLL CD+ +A ++ E + + GLK
Sbjct: 512 KLHKAMALLTKM----QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD- 566
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
E A +++ +AL + G ++
Sbjct: 567 -----------------EHAYAVLTDALCKAG---------------------RAEEAYS 588
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KG + V Y + K G D A +IE + +G P Y++LL LC
Sbjct: 589 FIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQ 647
Query: 381 GNSAVAVMYLKKMS-KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L +MS + + C Y IL+D + R+G+ A R+ EM + P
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFA--YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY V I C G+ +A + +M + PD+ ++ L+
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 206/522 (39%), Gaps = 90/522 (17%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQ 70
Q+ K + L KEAKE NG V Y S+I +S ++ EV+
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M+ D C+ + + + + +L++A++L + + + ++ TLL+ E
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 131 LEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRR----------------------- 166
+ A LF + G +K + +L D LC+ R
Sbjct: 548 FDNAFRLFEMMEQNG--LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 605
Query: 167 ---------SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-- 215
+D A + + M +GC PD +Y +L+ LC +RLNEA +L M R
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 216 -----------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++ G Y + + C +G+++DA
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM---- 302
++ K+ R+G+ AP + I + C I+ A S + + P+ +Y +
Sbjct: 726 LILKMEREGV-APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 303 ---------AIDLYNEGRIVEGD---KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
++D ++E D ++L+ M G P++ Y + +A K G ++EA
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+++ KG P +Y +L+K CD A+ ++ MS + G E+Y +LV
Sbjct: 845 CLLLDHMCGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS-ECGFQPQLESYRLLV 902
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
GLC +G F + + ++L Y + +L GL G
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 14/320 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L + R+ E ++DQM +C + I R G+ + A ++ +
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ + KE +LE A L L+ V + + N+L+D
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVAPDVVTYNILIDGCGHMGY 754
Query: 167 SDLALHVFQEMDFQGCYPDRESY-----HILMKGLCNDRRLNEAT-------HLLYSMFW 214
D A + M C P+ +Y H+L L R ++ + + + +
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R+ + G + Y +L+ C G++++A +L+ + KGL +P + + + C D
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL-SPNEDIYTLLIKCCCDT 873
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A S ++ G P L SY + + L NEG + + ++ G+ V +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933
Query: 335 EAKLAALFKDGMVDEALEVI 354
+ L K G VD +++
Sbjct: 934 KILNDGLLKAGYVDICFQML 953
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 238/530 (44%), Gaps = 61/530 (11%)
Query: 9 LTPTYLSQ-IIKKQKSPLTALKIFKEAKEKYPNYRH---------NGPVYASMIGILSE- 57
LTP+ +SQ ++ +SP L K + R P + +L +
Sbjct: 64 LTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQA 123
Query: 58 -----SNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+N I E+ E + + D K S VF I++ + +EA F + +
Sbjct: 124 LGGGTTNSIREIFEFLAASR-DRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGV 182
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+ ++ N+LL +K ++ EAA +L+ + +KS + + N++++VLC+ + A
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAE-MFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
M+ G P+ +Y+ ++ G C+ R+ A +L +M ++ D Y +L
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM----KRQKIEPDSFTYGSL 297
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ +C QG++++A +I E++++KGL+ + + CN G +++ A + +E L +G
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG-NLDMASAYKDEMLKKG 356
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE-----------AKLAA 340
P++++Y+++ L+ E R E + ++ E++ KG P + Y AK A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 341 LFKDGMV------------------------DEALEVIEEEMVKGTFVPTVRVYNILLKG 376
L D M+ EA ++ ++ +G +P V ++N L+ G
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV-LPDVIMFNALIDG 475
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C N A LK M + + + T+ ++ G CR+G+ EA + +EM R P
Sbjct: 476 HCSNSNVKGAFELLKDMDR-MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++N LI G G +A EM+ P + +++LV +C N
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 7/334 (2%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+ L+ C R+D A F M +G P E+ + L+ R EA +LY+
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNR-TEAAWVLYAEM 212
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+R+ K S + + ++ LC +GK++ A + + G+K + I C+
Sbjct: 213 FRLRIKSS---VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G +E A +++ + P +Y ++ + +GR+ E K+ +EM KG PS V+
Sbjct: 270 GR-VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + G +D A ++EM+K PT+ YN L+ L + A +K++
Sbjct: 329 YNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G + TY IL++G CR +A + +EML P +TY L+ L +
Sbjct: 388 QEK-GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
EA +++ S+ LPD+ ++++L+ C N+
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 173/403 (42%), Gaps = 10/403 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI +L + ++ + K+ + M+ + + T + Y +G++ A ++ + +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ ++ +L+ M K+ +LE A +F ++ N L+D C D+A
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIF-EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
EM +G P +Y+ L+ L ++R +EA M I +KG D + Y
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE----CMIKEIQEKGISPDAITYNI 401
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C + A + +++L G+K P + + L + ++ A L +
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIK-PTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G +P + ++A+ ID + V+G ++L +M P V + + ++G V+E
Sbjct: 461 GVLPDVIMFNAL-IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+ +E +G P +N L+ G G+ A +M G TY L
Sbjct: 520 ARELFDEMKRRG-IKPDHISFNTLISGYSRRGDIKDAFRVRNEML-DTGFNPTVLTYNAL 577
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
V GLC++ A +L+EM+ + P TY LI G+ +
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 143/340 (42%), Gaps = 45/340 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + + R+ E ++ ++M ++ T I + G L+ A + +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N+L+ + E + + A + ++ + + N+L++ C+C
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECM-IKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + EM G P +++Y L+ L R+ EA L F +I+ +G D++
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL----FKKITSEGVLPDVI 467
Query: 227 IYRTLL------------FAL-----------------------CDQGKIQDAMQILEKI 251
++ L+ F L C +GK+++A ++ +++
Sbjct: 468 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 527
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL--YNE 309
R+G+K P + + DI+ A + NE L G P++ +Y+A+ L E
Sbjct: 528 KRRGIK-PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G + E ++L EM +KG P Y + + K + DE
Sbjct: 587 GDLAE--ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 223/481 (46%), Gaps = 22/481 (4%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P +++KK +P + ++ ++ K N RH+ Y + L ++ ++
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKL-NIRHSFWTYNLLTRSLCKAGMHDLAGQM 125
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ MK D + + ++A G+L+ A +L L + N+LL +VK
Sbjct: 126 FECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL--LQSYEVEGCCMVVNSLLNTLVK 183
Query: 128 ESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++E A LF +SC + ++ N+L+ LC +++ A+ + M GC
Sbjct: 184 LDRVEDAMKLFEEHLRFQSC------NDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGC 237
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD +Y+ L+KG C L +A + + S G D+V Y +++ C GK+Q
Sbjct: 238 LPDIVTYNTLIKGFCKSNELKKANEMFDDV---KSSSGCSPDVVTYTSMISGYCKAGKMQ 294
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A +L+ +LR G+ P + + + ++ A+ + + + G P + +++++
Sbjct: 295 EASVLLDDMLRLGI-YPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
G++ +G ++ +EM +G +P+ Y + AL K+ + +A E++ + +
Sbjct: 354 IDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQ-LASKD 412
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
+P +YN ++ G C AG A++ +++M K+ C + T+ IL+ G C GR EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKK-KCKPDKITFTILIIGHCMKGRMFEA 471
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ +M+ P T + L+ L G EA L ++ + ++ D + + A+
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA-YHLNQIAHKGQINDGAPLETKTAN 530
Query: 483 V 483
V
Sbjct: 531 V 531
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 179/398 (44%), Gaps = 46/398 (11%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
R+ +AG + A +F+ + ++ L+ ++ KL A L L+S +EV
Sbjct: 111 RSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS---YEV 167
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQE-MDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ +N L++ L + R + A+ +F+E + FQ C D ++++IL++GLC + +A
Sbjct: 168 EGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSC-NDTKTFNILIRGLCGVGKAEKAV 226
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
LL M S G DIV Y TL+ C +++ A ++ +
Sbjct: 227 ELLGGM----SGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD----------------- 265
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
D++ + G P + +Y++M G++ E +LD+M G
Sbjct: 266 ---------DVKSSS---------GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLG 307
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+P+ V + + K G + A E+ + + G F P V + L+ G C G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCF-PDVVTFTSLIDGYCRVGQVNQG 366
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++M+ + G N TY IL++ LC++ R L+A +L ++ + P YN +I
Sbjct: 367 FRLWEEMNAR-GMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C GK EA++ +EEM + PD ++ L+ C
Sbjct: 426 GFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHC 463
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 14/345 (4%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ ++ + NLL LC+ DLA +F+ M G P+ L+ +L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKL 154
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKS 261
+ AT LL S + G +V+ +LL L +++DAM++ E+ LR + K+
Sbjct: 155 HCATALLLQ-----SYEVEGCCMVV-NSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKT 208
Query: 262 RRHRI-DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
I LC E A L+ G +P + +Y+ + + + +++ D
Sbjct: 209 FNILIRGLCGVGKAEK---AVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD 265
Query: 321 EMR-TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+++ + G P +V Y + ++ K G + EA V+ ++M++ PT +N+L+ G
Sbjct: 266 DVKSSSGCSPDVVTYTSMISGYCKAGKMQEA-SVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
AG A KM GC + T+ L+DG CR G+ + R+ EEM R +P
Sbjct: 325 AGEMHTAEEIRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAF 383
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY++LI LC + +A L ++ S+ +P +++ ++ C
Sbjct: 384 TYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 216/489 (44%), Gaps = 55/489 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN---YRHNGPVYASMIGILSESNRIT 62
P+ ++ L+ +++ Q+ P AL +F+ PN +R++ Y MI L +
Sbjct: 6 PKRISSFRLASLLRLQEDPKLALHLFQHPNSN-PNPKPFRYSLLCYDLMITKLGRAKMFH 64
Query: 63 EMKEVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
EM++++ Q K + K+ +F I Y RAG A+ +F + + C +S+NTL
Sbjct: 65 EMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTL 124
Query: 122 LKEMV--KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L ++ KE + H + ++ VK + N+++ LC R D AL V EM
Sbjct: 125 LNVLMICKEFDVMREHFVNIKR----HVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKN 180
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ P++ ++ L+ GLC + +L EA L M ++ G + +Y TL+ LC G
Sbjct: 181 RDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYM---VNVHGLCPNEYVYATLIKGLCAVG 237
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A+++ E++ R G+K A Y
Sbjct: 238 ELSFALRLKEEMERDGVKVDS------------------------------------AIY 261
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + L+ GR E VL EM KG V Y + KD + A +++ +EM+
Sbjct: 262 STLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKIL-DEMM 320
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ P V YN++L LC G + A + M ++ GC + +Y I+ DGL F
Sbjct: 321 ENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRR-GCAPDVVSYRIVFDGLSDAMEF 379
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW-LEEMISQAKLPDISVWSS 478
+A+ +L+EM+ + + P + I LC G E ++W + + + D +W
Sbjct: 380 KDAAFILDEMVFKGFAPRSSSICKFINRLCQNGD--EDLVWSVLNCLGKINAIDTELWKM 437
Query: 479 LVASVCCNT 487
+A N+
Sbjct: 438 AIAVALKNS 446
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 182/403 (45%), Gaps = 11/403 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R + Q NEA+ LF ++ + + F LL + K K + I +
Sbjct: 43 LRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVV-INLCKHLQIMG 101
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + + NLLM+ CQ + LA ++ G PD ++ L+ G C R+ EA
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
SM ++ + G D+VIY T++ +LC G + +A+ + ++ G++ +
Sbjct: 162 ----SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
CN G A L+ + R P + +++A+ EG++++ ++ +EM
Sbjct: 218 VNGLCNSGR-WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y + + L +G +DEA ++ KG F P V Y L+ G C A
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVEDA 335
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +MS Q G N TY L+ G G+ A V M+ R P + TYNVL+
Sbjct: 336 MKIFYEMS-QKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394
Query: 447 GLCSIGKQYEAVMWLEEMISQ---AKLPDISVWSSLVASVCCN 486
LC GK +A+M E+M + P+I ++ L+ +C N
Sbjct: 395 CLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 183/424 (43%), Gaps = 54/424 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S+I NRI E +++QM + ++ T I + + G ++ A+SLF +
Sbjct: 144 FTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQME 203
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + +L+ + + A +L LR ++K + + N L+D + +
Sbjct: 204 NYGIRPDVVMYTSLVNGLCNSGRWRDADLL-LRGMMKRKIKPDVITFNALIDAFVKEGKL 262
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A ++ EM P+ +Y L+ GLC + RL+EA MF+ + KG D+V
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQ----MFYLMETKGCFPDVVA 318
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y +L+ C K++DAM+I ++ +KGL ++
Sbjct: 319 YTSLINGFCKCKKVEDAMKIFYEMSQKGLTG----------------------NTITYTT 356
Query: 288 LIRG----GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
LI+G G P++A +V M ++G P++ Y L L
Sbjct: 357 LIQGFGLVGKPNVAQ------------------EVFGHMVSRGVPPNIRTYNVLLHCLCY 398
Query: 344 DGMVDEALEVIEEEM---VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+G V++AL + E+ + G P +R YN+LL GLC G A+M M K+
Sbjct: 399 NGKVNKALMIFEDMQKREIDGV-PPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR-DMD 456
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
TY I++ G+C+ G+ +A + + + P V TY +I GL G EA +
Sbjct: 457 IGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVL 516
Query: 461 LEEM 464
+M
Sbjct: 517 FRKM 520
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 137/324 (42%), Gaps = 46/324 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L K+ L A +++ E + + N Y S+I L R+ E +
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQM--SIAPNIFTYTSLINGLCMEGRLDEAR 301
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M+ C + + I + + ++ +A+ +F +SQ T ++ TL++
Sbjct: 302 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM---DFQGC 182
K A +F V I++ N+L+ LC + + AL +F++M + G
Sbjct: 362 GLVGKPNVAQEVF-GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGV 420
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P+ +Y++L+ GLC + +L +A + F + ++ I+ Y ++ +C GK++
Sbjct: 421 PPNIRTYNVLLHGLCYNGKLEKALMV----FGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
DA+ + + KG+K P++ +Y+ M
Sbjct: 477 DALNLFCSLPSKGVK------------------------------------PNVVTYTTM 500
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKG 326
L+ EG ++E + +M+ G
Sbjct: 501 ISGLFREGLMLEAHVLFRKMKEDG 524
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 198/454 (43%), Gaps = 9/454 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI L + + + + QM+ + + I Y + G L E SLF +
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
CV ++N L+ K K+ A F +K + + + L+D C+
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYF-SEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ +F +M G P+ +Y L+ C L EA LL M Q G +IV
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML----QAGVKLNIV 465
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y LL LC G++ +A ++ +L+ G+ +P + + + E +E A ++ +
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGI-SPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P L Y ++ ++ ++ E +L+EM+++G + V+ + A FK G
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+AL +E G T+ Y +L+ GLC AG +AV Y +M +G N Y
Sbjct: 585 SSDALNFFQEMQDVGV-EATIVTYCVLIDGLCKAGIVELAVDYFCRM-LSLGLQPNVAVY 642
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC++ A ++ +EM R P + + LI G G EA++ + M
Sbjct: 643 TSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 702
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A D+ V++SLV+ +L+ RK ++
Sbjct: 703 LAIEFDLHVYTSLVSGF-SQCGELHQARKFFNEM 735
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 222/542 (40%), Gaps = 66/542 (12%)
Query: 3 VRWPRLLTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
V + L P ++S+I+ ++ P ALK FK A + +RH Y ++ ++ +
Sbjct: 121 VLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQV-GFRHTTESYCIIVHLVFRARMY 179
Query: 62 TE----MKEVIDQMKGDS-----------------CECKDSVFATAIRTYARAGQLNEAV 100
T+ +KEVI + D C VF + G L EA
Sbjct: 180 TDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEAN 239
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
F + F + +S N LL + K + F G + + + N+++D
Sbjct: 240 ECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR-KFFNDMIGAGIAPSVFTYNVMIDY 298
Query: 161 LC-------------QCRRSDLALHV----------------------FQEMDFQGCYPD 185
LC Q R L+ V F EM GC PD
Sbjct: 299 LCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 358
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ C ++ A + F + G ++V Y TL+ A C +G +Q A+
Sbjct: 359 IITYNGLINCYCKFEKMPRA----FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ + R GL + + C G E K L+N+ L G ++ +Y+A+
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK-LLNDMLQAGVKLNIVTYTALLDG 473
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L GR++E ++V M G P+ +Y A + K +++A++++ ++M + P
Sbjct: 474 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL-KQMTECNIKP 532
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ +Y ++ G C + L++M K G AN ++D + G+ +A
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEM-KSRGISANPVISTTIIDAYFKAGKSSDALNF 591
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+EM + TY VLI GLC G AV + M+S P+++V++SL+ +C
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651
Query: 486 NT 487
N
Sbjct: 652 NN 653
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 166/390 (42%), Gaps = 8/390 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + ++ E +MK + + ++T I + + G + A+ LF ++
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++ +L+ K L A L L VK I + L+D LC+ R
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKL-LNDMLQAGVKLNIVTYTALLDGLCKAGR 479
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF+ M G P+++ Y L+ G R+ +A +L M ++ D++
Sbjct: 480 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM----TECNIKPDLI 535
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y ++++ C Q K+++ ILE++ +G+ A I G+ + A + E
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD-ALNFFQE 594
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G ++ +Y + L G + M + G P++ +Y + + L K+
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A ++ +E +G P + + L+ G GN A++ + +M+ ++ + Y
Sbjct: 655 IESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRMT-ELAIEFDLHVY 712
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LV G + G +A + EM+ + P
Sbjct: 713 TSLVSGFSQCGELHQARKFFNEMIEKGILP 742
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 48/334 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ L ++ R+ E +EV M D V+ + Y +A ++ +A+ +
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLM 158
K +++ N + +++ + KLE ++ E+KSR S N ++
Sbjct: 523 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL------EEMKSRGISANPVISTTII 576
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D + +S AL+ FQEM G +Y +L+ GLC L F R+
Sbjct: 577 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKA----GIVELAVDYFCRMLS 632
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G ++ +Y +L+ LC I+ A ++ +++ +G+ DI
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP-----------------DIT 675
Query: 279 GAKSLINEALIRGGIP----------------SLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+LI+ L G + L Y+++ G + + K +EM
Sbjct: 676 AFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 735
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
KG P V+ L +K G +DEA+E+ E
Sbjct: 736 IEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 769
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+KI K+ E N + + +Y S+I ++ E K ++++MK + T
Sbjct: 518 AMKILKQMTE--CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y +AG+ ++A++ F+ + ++ L+ + K +E A F R
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR-MLSLG 634
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + L+D LC+ + A +F EM +G PD ++ L+ G L EA
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
L+ R+++ D+ +Y +L+ G++ A + +++ KG+
Sbjct: 695 VLIS----RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 740
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 14/394 (3%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRI 151
++++ LF + + +W F+ + +V+ + A LF + YG V +
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYG--VVVSV 206
Query: 152 QSLNLLMDVL-CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
S NL + L C +A+ VF+E G + S +I++ LC ++ EA +LL
Sbjct: 207 DSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLV 266
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + +G+ D+V Y ++ C G++ +++++++ KGLK + + I L
Sbjct: 267 QM----TDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +GE +E A+ L+ G P Y+ + G + K+ DEMR K P
Sbjct: 323 CKNGEVVE-AEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD 381
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + + K G + EA E+ E +VKG P Y L+ G C AG A
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKG-LEPDEVTYTALIDGYCKAGEMKEAFSVH 440
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M Q G N TY L DGLC++G A+ +L EM + P V TYN ++ GLC
Sbjct: 441 NQMV-QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
IG + V +EEM PD +++L+ + C
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D L + E+ +G PD Y+ ++ LC + + EA LL M + G
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM----RKWGV 343
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V+Y T++ C G + A ++ +++ RK + + C G+ +E A+
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVE-AR 402
Query: 282 SLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ NE L++G P +Y+A+ ID Y G + E V ++M KG P++V Y A
Sbjct: 403 EMFNEMLVKGLEPDEVTYTAL-IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K+G +D A E++ E KG P V YN ++ GLC GN V +++M G
Sbjct: 462 LCKNGEIDVANELLHEMSRKG-LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD-LAGFY 519
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+D C+ G +A +L ML + P + T+NVL+ G C G +
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+E M+ + +P+ + ++SL+ C
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYC 603
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 182/408 (44%), Gaps = 11/408 (2%)
Query: 60 RITEMKEV---IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
RI E+ +V +D++KG + + ++ I + G++ EA L + + ++
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+ T++ K + AA LF ++ I + ++ +C+ + A +F E
Sbjct: 349 VYTTVISGFCKLGNVSAACKLF-DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +G PD +Y L+ G C + EA +S+ ++ QKG ++V Y L LC
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEA----FSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G+I A ++L ++ RKGL+ + I C G +IE L+ E + G P
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIG-NIEQTVKLMEEMDLAGFYPDT 522
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + G + + ++L M K P+LV + + GM+++ +IE
Sbjct: 523 ITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEW 582
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+ KG +P +N L+K C N K M + G + + TY IL+ G C+
Sbjct: 583 MLEKG-IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR-GVMPDSNTYNILIKGHCKA 640
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
EA + +EM+ + Y TY+ LIRG K EA EEM
Sbjct: 641 RNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 9/327 (2%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+L C+ ++ A + + M G +PD Y ++ G C ++ A L F +
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL----FDEMR 374
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+K DIV Y +++ +C GK+ +A ++ ++L KGL+ + + C GE +
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE-M 433
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A S+ N+ + +G P++ +Y+A+A L G I +++L EM KG P++ Y
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L K G +++ ++++EE + G F P Y L+ C G A A L+ M +
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAG-FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK- 551
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
T+ +L++G C G + R++E ML + P T+N L++ C
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ M + +PD + ++ L+ C
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHC 638
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C+ I+ A+++ E+ G+ + + C C G+ + A +L+ + RG P
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGK-VREAHNLLVQMTDRGNFPD 276
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ SY + G + + K++DE++ KG P +Y + L K+G V EA +++
Sbjct: 277 VVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLR 336
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
G F P VY ++ G C GN + A +M ++ V + TY ++ G+C+
Sbjct: 337 GMRKWGVF-PDNVVYTTVISGFCKLGNVSAACKLFDEMRRK-KIVPDIVTYTSVIHGICK 394
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G+ +EA + EML++ P TY LI G C G+ EA +M+ + P++
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454
Query: 476 WSSLVASVCCNTADLNVCRKTLEQLS 501
+++L +C N +++V + L ++S
Sbjct: 455 YTALADGLCKN-GEIDVANELLHEMS 479
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K+F E + K + Y S+I + +S ++ E +E+ ++M E + +
Sbjct: 366 ACKLFDEMRRK--KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y +AG++ EA S+ + Q ++ L + K +++ A+ L L
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL-LHEMSRKG 482
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + + N +++ LC+ + + + +EMD G YPD +Y LM C + +A
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-------- 258
LL M K +V + L+ C G ++D +++E +L KG+
Sbjct: 543 ELLRIML----NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSL 598
Query: 259 --------------------------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
P S + I + +++ A L E + +G
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+ A+Y A+ Y + VE K+ +EMR G +Y+ + +++G + LE
Sbjct: 659 SVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLE 718
Query: 353 VIEEEMVK 360
+ +E M +
Sbjct: 719 LCDEFMTE 726
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 192/436 (44%), Gaps = 13/436 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I +L + R+ + ++D M C+ + + R +A+++ +
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A L R YG++ + S L+ LC +
Sbjct: 205 RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT--VSYTTLLKGLCASK 262
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D +F EM + C P+ ++ +L++ C + A +L M ++ G +
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM----TEHGCATNT 318
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ ++ ++C QG++ DA ++L + G P + + L E + AK L+N
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCN-PDTISYTTVLKGLCRAERWDDAKELLN 377
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + P+ +++ L +G I + ++++M G +V Y A + G
Sbjct: 378 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQG 437
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D ALE+ K P Y LL GLC+A A + +M + C N T
Sbjct: 438 HIDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDGAAELVAEMLRG-DCPPNVVT 492
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ +LV C+ G EA ++E+M+ P + TYN L+ G+ +A+ L ++
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552
Query: 466 SQAKLPDISVWSSLVA 481
S+ PD+ +SS++
Sbjct: 553 SKGVSPDVITFSSIIG 568
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 184/402 (45%), Gaps = 11/402 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ IR G++ +A+SL ++ + C ++ LL+ M + S E A + L
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQA-MAVLDE 203
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N++++ +C+ R D A + + G PD SY L+KGLC +R
Sbjct: 204 MRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKR 263
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++ L F + +K + V + L+ C G ++ A+Q+LE++ G +
Sbjct: 264 WDDVEEL----FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G ++ A L+N+ G P SY+ + L R + ++L+E
Sbjct: 320 LCNIVINSICKQGR-VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M P+ V + + L + G++++A+ +IE+ G V V YN L+ G C G
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVV-TYNALVNGFCVQG 437
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ + M C N TY L+ GLC R A+ ++ EML P V T+
Sbjct: 438 HIDSALELFRSMP----CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
NVL+ C G EA+ +E+M+ P++ +++L+ +
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 157/328 (47%), Gaps = 10/328 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC+ R+ A V + + G D +Y+ L+ G C L+ A L+ SM
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---- 137
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
D Y L+ LCD+G++ DA+ +L+ +LR+G + P + + L
Sbjct: 138 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ-PNVVTYTVLLEAMCRNSG 193
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A ++++E +G P++ +Y+ + + EGR+ + ++L+ + + GF P V Y
Sbjct: 194 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTT 253
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L L D+ E+ E M K +P +++L++ C G A+ L++M++
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNC-MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N I+++ +C+ GR +A ++L +M P +Y +++GLC + +
Sbjct: 313 -GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDD 371
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A L EM+ P+ +++ + +C
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILC 399
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 191/442 (43%), Gaps = 19/442 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ + ++ + V+D+M+ C + I R G++++A L L
Sbjct: 180 TYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRL 239
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLC 162
+ T S+ TLLK + + + LF ++C EV + ++L+ C
Sbjct: 240 PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV-----TFDMLIRFFC 294
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ V ++M GC + +I++ +C R+++A LL M G
Sbjct: 295 RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM----GSYGCN 350
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D + Y T+L LC + DA ++L +++R + + C G IE A
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL-IEQAIM 409
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
LI + G + +Y+A+ +G I D L+ R+ P+ + Y L L
Sbjct: 410 LIEQMSEHGCTVGVVTYNALVNGFCVQGHI---DSALELFRSMPCKPNTITYTTLLTGLC 466
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+D A E++ E M++G P V +N+L+ C G A+ +++M + GC N
Sbjct: 467 NAERLDGAAELVAE-MLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEH-GCTPN 524
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+DG+ +D +A +L ++ + P V T++ +I L + EAV
Sbjct: 525 LITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584
Query: 463 EMISQAKLPDISVWSSLVASVC 484
+ P V++ ++ +C
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLC 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 185/438 (42%), Gaps = 46/438 (10%)
Query: 32 KEAKEKYPNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
+E + P+Y + + Y +++ L S R +++E+ +M +C + F IR
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
+ R G + A+ + + +++ C T N ++ + K+ +++ A L L +
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL-LNDMGSYGCNP 351
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
S ++ LC+ R D A + EM C P+ +++ + LC + +A L+
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M S+ G +V Y L+ C QG I A+++ + K P + + L
Sbjct: 412 EQM----SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTTLLT 463
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ E ++GA L+ E L P++ +++ + +G + E +++++M G P
Sbjct: 464 GLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTP 523
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKG------TFV------------------- 364
+L+ Y L + KD ++ALE++ + KG TF
Sbjct: 524 NLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLF 583
Query: 365 ---------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
P VYN +L GLC A+ + M GC+ N TY IL++GL
Sbjct: 584 HVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN-GCMPNESTYIILIEGLAH 642
Query: 416 DGRFLEASRVLEEMLIRS 433
+G EA +L + R
Sbjct: 643 EGLLKEAQDLLSVLCSRG 660
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 214/478 (44%), Gaps = 19/478 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L + + + A+ + E + K PN Y +I + R+ +
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV----TYNVIINGMCREGRVDD 231
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+E+++++ + + T ++ + + ++ LF + + NC+ +F+ L++
Sbjct: 232 ARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 291
Query: 124 EMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ +E A +L + +G + + N++++ +C+ R D A + +M GC
Sbjct: 292 FFCRGGMVERAIQVLEQMTEHGCATNTTL--CNIVINSICKQGRVDDAFKLLNDMGSYGC 349
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD SY ++KGLC R ++A LL M + + V + T + LC +G I+
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEMV----RNNCPPNEVTFNTFICILCQKGLIE 405
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+ ++E++ G + + C G I+ A L + P+ +Y+ +
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH-IDSALELFRSMPCK---PNTITYTTL 461
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L N R+ +++ EM P++V + ++ + G ++EA+E++E+ M G
Sbjct: 462 LTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGC 521
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P + YN LL G+ +S A+ L + + G + T+ ++ L ++ R EA
Sbjct: 522 -TPNLITYNTLLDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGILSKEDRIEEA 579
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++ + P YN ++ GLC + A+ + M+S +P+ S + L+
Sbjct: 580 VQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 275 EDIEGAKSLINEA-LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
ED+ GA L+ + G P + + + +L GR + +VL G +
Sbjct: 54 EDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 113
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y +A + G +D A +I V P Y L++ LCD G A A+ L M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMPV----APDAYTYTPLIRVLCDRGRVADALSLLDDM 169
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ GC N TY +L++ +CR+ F +A VL+EM + P + TYNV+I G+C G+
Sbjct: 170 LRR-GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A L + S PD +++L+ +C
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+AL++F+ K N Y +++ L + R+ E++ +M C F
Sbjct: 441 SALELFRSMPCK-----PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + + G L EA+ L + + + C ++NTLL + K+ E A + L
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA-LELLHGLVSK 554
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + + + ++ +L + R + A+ +F + G P Y+ ++ GLC ++ A
Sbjct: 555 GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNA 614
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
F + G + Y L+ L +G +++A +L + +G+
Sbjct: 615 I----DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V + L++ LC G ++ A L+ ++ G + Y LV G CR G A R
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ M + P TY LIR LC G+ +A+ L++M+ + P++ ++ L+ ++C
Sbjct: 133 LIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189
Query: 485 CNTA 488
N+
Sbjct: 190 RNSG 193
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 191/440 (43%), Gaps = 51/440 (11%)
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCY 143
T I +A + +S+ ++ + S + L++ V K A +L L
Sbjct: 64 TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+ + + + NLL+ CQ S A+ +F M PD SY+ ++ GLC +RL
Sbjct: 124 GFHL--NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 204 EATHLLYSMFWRISQKGSGE---DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
EA L M KG GE + V + L+ C G +++ +LE++ + GL+
Sbjct: 182 EAKELFKEM------KG-GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS-------------------- 300
+ C+ G DIE K L NE L + P++ +YS
Sbjct: 235 FVYSALISGFCSKG-DIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293
Query: 301 ---------------AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+A L GR + KVLD M +G P+ V Y A + L K+G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK-MSKQVGCVANGE 404
VD+AL ++E KG P V Y+ L+KGLC G AV L MSK+ +
Sbjct: 354 RVDDALGILETMAKKGK-KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ +++ LC+ R A RV M+ R + + TYN+LI G S GK +A+ ++
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ P+ + ++ L+ +C
Sbjct: 473 VDSGISPNAATYTVLINGLC 492
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 22/441 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + R+ E KE+ +MKG C+ F+ I + + G + E L + +
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ ++ L+ + +E LF LR V + + + LM+ LC+
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK----NVTPNVVTYSCLMNALCKK 282
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
++ A + M PD +Y +L GL + R ++A +L M R G +
Sbjct: 283 QKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR----GEEPN 338
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y ++ LC +G++ DA+ ILE + +KG K + C G+ I+ A L+
Sbjct: 339 NVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK-IDEAVDLL 397
Query: 285 N-----EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
N E I+ P + +++ + +L + R+ +V M +GF ++V Y +
Sbjct: 398 NLLMSKEFHIK---PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
G + +ALE+ ++ + G P Y +L+ GLC ++A K + G
Sbjct: 455 GYLSAGKLTKALELWKDAVDSG-ISPNAATYTVLINGLCKMQMLSIAKGLFNK-KRASGT 512
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
Y L+ LCR+ +A + +EM ++ P V ++N++I G G A
Sbjct: 513 RPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKE 572
Query: 460 WLEEMISQAKLPDISVWSSLV 480
L EM++ +PD +S L+
Sbjct: 573 LLLEMLNMNLVPDNITFSILI 593
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 15/336 (4%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N L+D L + + D + V +M +P S L++ N ++ + A + +
Sbjct: 61 SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA----FGV 116
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
I ++G ++ + LL C G AM + + R L P + +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCL-IPDCVSYNTVINGLC 175
Query: 273 DGEDIEGAKSLINEALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G+ + AK L E ++GG P+ ++SA+ G + EG +L+EM G
Sbjct: 176 KGKRLVEAKELFKE--MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ +Y A ++ G ++ E+ E M++ P V Y+ L+ LC A L
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNE-MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292
Query: 391 KKMSKQVGCVANGE--TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
M+ GC + Y +L DGL ++GR +A +VL+ M+ R P TYN +I GL
Sbjct: 293 DTMT---GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G+ +A+ LE M + K PD+ +S+LV +C
Sbjct: 350 CKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLC 385
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 12/205 (5%)
Query: 292 GIPSLASYSAMAIDLYNEGRIVEG-------DKVLD---EMRTKGFWPSLVMYEAKLAAL 341
G+ L +++YN +++G K +D M+ P V Y + L
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K + EA E+ +E M G P ++ L+ G C G+ L++M K +G
Sbjct: 175 CKGKRLVEAKELFKE-MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK-MGLEG 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y L+ G C G + EML ++ P V TY+ L+ LC K EA L
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292
Query: 462 EEMISQAKLPDISVWSSLVASVCCN 486
+ M PD+ ++ L + N
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKN 317
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL+++K+A + N Y +I L + ++ K + ++ + S + T
Sbjct: 465 ALELWKDAVDS--GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + R + +A +LF+ + N SFN ++ +K +E+A L L
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNL 582
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V I + ++L++ + + D A +++ M G PD + L+KG L T
Sbjct: 583 VPDNI-TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGY----SLKGKT 637
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+ SM +++ K D + T+L LC+ K D +IL K
Sbjct: 638 EKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKF 682
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+NTL+ + +ES +E A LF + + S N+++D + + A + EM
Sbjct: 519 YNTLMASLCRESSVEQARNLF-QEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEM 577
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
PD ++ IL+ +L+EA S++ R+ G D V++ +LL
Sbjct: 578 LNMNLVPDNITFSILINRFLKLGQLDEAA----SLYERMVSCGHVPDAVLFDSLLKGYSL 633
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+GK + + +L+++ K + I C CN +D++ K L
Sbjct: 634 KGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 45/408 (11%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+PT + ++I Q PL A +IF A ++ PN+RH+ + +I L + +V+
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE- 128
+ + +F I+ YA A + +S F + +FN + N +L +V
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
L+ A LF +S V +S NLLM C +A +F +M + PD +S
Sbjct: 169 GYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y IL++G C ++N A LL M KG D + Y TLL +LC + ++++A ++L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDML----NKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++ KG CN P L Y+ M +
Sbjct: 284 CRMKLKG---------------CN---------------------PDLVHYNTMILGFCR 307
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
E R ++ KVLD+M + G P+ V Y + L GM DE + +EE + KG F P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFS 366
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
V N L+KG C G A ++ + K G + +T+ +++ +C +
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVEVVMKN-GETLHSDTWEMVIPLICNE 413
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
R L + +G +Q A ++ + G+ P +R + + + +D+ A L + L
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGV-MPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R +P + SY + +G++ ++LD+M KGF P + Y L +L + +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA +++ +KG P + YN ++ G C + A L M GC N +Y
Sbjct: 278 EAYKLLCRMKLKGC-NPDLVHYNTMILGFCREDRAMDARKVLDDMLSN-GCSPNSVSYRT 335
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GLC G F E + LEEM+ + + P N L++G CS GK EA +E ++
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 469 KLPDISVWSSLVASVC 484
+ W ++ +C
Sbjct: 396 ETLHSDTWEMVIPLIC 411
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D VL + R+ G +P L ++ + + E + +M++ F P + N +L
Sbjct: 104 DDVLAKHRSSG-YPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L L K S+ G + N +Y +L+ C + A ++ +ML R
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
P V++Y +LI+G C G+ A+ L++M+++ +PD +++L+ S+C T
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 187/408 (45%), Gaps = 27/408 (6%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
++ A+S F + + T FN LL + K K + + + + I +L+
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAK-MKHHSTLLSLSHQMDSFGIPPNIYTLH 100
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C R A V ++ G PD ++ L++G+C + ++ EA HL F +
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHL----FDK 156
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G D+V Y TL+ LC G A+++L +++K + + I C D +
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A +L +E + +G P + +Y+++ L N +L+EM P +V +
Sbjct: 217 VTE-AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 275
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA +V+++ + +G P V Y L+ G C AV M
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 396 QVGCVANGETYGILVDGLCRDGR----------------FL---EASRVLEEMLIRSYWP 436
+ GC+ N +Y L++G C+ R +L EA +V + M+ + P
Sbjct: 335 K-GCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V +YN LI G C I + +A+ EM Q +PD +S+L+ +C
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 194/429 (45%), Gaps = 39/429 (9%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T IR G++ EA+ LF + ++ TL+ + K AA I L
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA-IRLLG 190
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S + + + N ++D LC+ R+ A ++F EM +G PD +Y+ L+ LCN
Sbjct: 191 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN-- 248
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L E H+ ++ + D+V + T++ ALC +GK+ +A +++K++++G++
Sbjct: 249 -LCEWKHV-ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP-- 304
Query: 261 SRRHRIDLCPCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV--- 313
+ + DG +++ A + + + +G +P++ SY+ + RI
Sbjct: 305 ---NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361
Query: 314 ----------------EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
E KV D M KG P+++ Y + K +D+A+ + E
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE- 420
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC--VANGETYGILVDGLCR 415
M + +P Y+ L+ GLC A+ +M V C + N TY IL+D LC+
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM---VACSQIPNLVTYRILLDYLCK 477
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+ EA +L+ + + P ++ N+ I G+C G+ A + S+ PD+
Sbjct: 478 NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWT 537
Query: 476 WSSLVASVC 484
+S ++ +C
Sbjct: 538 YSIMINGLC 546
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 199/491 (40%), Gaps = 58/491 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K + A+++ +K N + N Y ++I L + ++TE
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK--NCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M + + I + +L + + SFNT++ +
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE K+ AH + + V+ + + LMD C D A+ VF M +GC P+
Sbjct: 282 CKEGKVTEAHDV-VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSM---------------FWRISQKGSGEDIVIYRT 230
SY+ L+ G C +R+++A H M F + KG +++ Y T
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C +I AM + ++ R+ L
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQEL---------------------------------- 426
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
IP +YS + L + R+ + + EM P+LV Y L L K+ + EA
Sbjct: 427 --IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 484
Query: 351 LEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+ +++ ++G+ + P ++V NI + G+C AG A +S + G + TY I+
Sbjct: 485 MALLKA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK-GLQPDVWTYSIM 541
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GLCR G EAS++ EM YN + RG + A+ L+EM+++
Sbjct: 542 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 601
Query: 470 LPDISVWSSLV 480
D S + V
Sbjct: 602 SADASTMTLFV 612
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 26/353 (7%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +++ L + ++TE +V+D+M E + + + +++EAV +F +
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRS---CY---GWEVK-----------S 149
C+ S+NTL+ K +++ A H L CY VK
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ S N L++ C+ +R D A+++F EM Q PD +Y L+ GLC+ RL +A L
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL- 268
+ M SQ ++V YR LL LC + +AM +L+ I L P + + I +
Sbjct: 454 HEMV-ACSQI---PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD-PDIQVNNIAID 508
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE +E A+ L + +G P + +YS M L G + E K+ EM G
Sbjct: 509 GMCRAGE-LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 567
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ +Y ++ A+++++E + +G F + +K L D G
Sbjct: 568 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARG-FSADASTMTLFVKMLSDDG 619
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 32/459 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ +I L + +R+ E KE+++++ + + + I Y ++G+++ A+ + K +
Sbjct: 314 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 373
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C ++N+L+ +VK+ KL A L + + + I LL QC
Sbjct: 374 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG---QCDE 430
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D A +F+ M+ G PD +Y +L LC R EA YS I +KG
Sbjct: 431 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA----YSF---IVRKGVALT 483
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y TL+ G A ++E+++ +G P S + + L + + A ++
Sbjct: 484 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQKRLNEALPIL 542
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ +RG ++ +Y+ + ++ EG+ ++ +EM + G PS Y + + K+
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 602
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +++A ++I + M + P V YNIL+ G G A LK+M C N
Sbjct: 603 GRLEDAEDLILK-MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG-ASCEPNYW 660
Query: 405 TYGILVDGLCRDG----RFLEAS------------RVLEEMLIRSYWPCVETYNVLIRGL 448
TY +L+ L + R ++ S ++LE M+ P V TY+ LI G
Sbjct: 661 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 720
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
C G+ EA + L+ M + P+ +++ L+ CC+T
Sbjct: 721 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI-KCCCDT 758
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 193/446 (43%), Gaps = 16/446 (3%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN R + +I L +S R+ + + + D M + + I Y++ G++N+
Sbjct: 171 PNVR----AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A+ + + + + C ++NTL+ + + EA +L G+ + + L+
Sbjct: 227 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGF--TPTVVTFTNLI 284
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ C + D AL + +M C D + + L+ L RL EA LL IS
Sbjct: 285 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN----EISA 340
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +++ Y +++ C GK+ A+++L+ + R G + P + + + + +
Sbjct: 341 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ-PNAWTYNSLMYGLVKDKKLH 399
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L+ + G IP++ +Y+ + +E ++ + M G P Y
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL K G +EA I + V T V Y L+ G AGN+ A +++M + G
Sbjct: 460 DALCKAGRAEEAYSFIVRKGVALTKV----YYTTLIDGFSKAGNTDFAATLIERMIDE-G 514
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C + TY +L+ LC+ R EA +L++M +R + Y +LI + GK A
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
EM S P + ++ + S C
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYC 600
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 186/426 (43%), Gaps = 19/426 (4%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
M V Q+ D + T I++Y + G L A F+ L + T + N L+
Sbjct: 52 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 111
Query: 124 EMVKESKLEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+ +L A LFL C E S +L+ LC + AL +F M
Sbjct: 112 GYCRTGELRKACWLFLMMPLMGCQRNEY-----SYTILIQGLCDAKCVRKALVLFLMMKR 166
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
GC P+ ++ L+ GLC R+ +A L +M Q G ++ Y ++ G
Sbjct: 167 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM----PQNGVVPSVMTYNAMIVGYSKLG 222
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ DA++I E + + G + + C+ + E A+ L+N A+ G P++ ++
Sbjct: 223 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD--QKTEEAEELLNNAVKEGFTPTVVTF 280
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + + + ++ ++M + L ++ + +L K + EA E++ E
Sbjct: 281 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISA 340
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
G VP V Y ++ G C +G +A+ LK M + GC N TY L+ GL +D +
Sbjct: 341 NG-LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD-GCQPNAWTYNSLMYGLVKDKKL 398
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSS 478
+A +L +M P V TY L++G C ++ L EM+ Q L PD ++
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCD-EHDFDNAFRLFEMMEQNGLKPDEHAYAV 457
Query: 479 LVASVC 484
L ++C
Sbjct: 458 LTDALC 463
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 172/401 (42%), Gaps = 50/401 (12%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
F I Y A + ++A+ + + C Q F L+ ++K+ +L EA +L
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
S G + + + ++D C+ + D+AL V + M+ GC P+ +Y+ LM GL D+
Sbjct: 339 SANG--LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 396
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+L++A LL M + G +++ Y TLL CD+ +A ++ E + + GLK
Sbjct: 397 KLHKAMALLTKM----QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD- 451
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
E A +++ +AL + G A YS +
Sbjct: 452 -----------------EHAYAVLTDALCKAGRAEEA-YSFIV----------------- 476
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
KG + V Y + K G D A +IE + +G P Y++LL LC
Sbjct: 477 ---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC-TPDSYTYSVLLHALCKQ 532
Query: 381 GNSAVAVMYLKKMS-KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L +MS + + C Y IL+D + R+G+ A R+ EM + P
Sbjct: 533 KRLNEALPILDQMSLRGIKCTIFA--YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 590
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY V I C G+ +A + +M + PD+ ++ L+
Sbjct: 591 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 631
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 206/522 (39%), Gaps = 90/522 (17%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQ 70
Q+ K + L KEAKE NG V Y S+I +S ++ EV+
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M+ D C+ + + + + +L++A++L + + + ++ TLL+ E
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432
Query: 131 LEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRR----------------------- 166
+ A LF + G +K + +L D LC+ R
Sbjct: 433 FDNAFRLFEMMEQNG--LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 490
Query: 167 ---------SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-- 215
+D A + + M +GC PD +Y +L+ LC +RLNEA +L M R
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Query: 216 -----------------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++ G Y + + C +G+++DA
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 610
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM---- 302
++ K+ R+G+ AP + I + C I+ A S + + P+ +Y +
Sbjct: 611 LILKMEREGV-APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 669
Query: 303 ---------AIDLYNEGRIVEGD---KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
++D ++E D ++L+ M G P++ Y + +A K G ++EA
Sbjct: 670 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+++ KG P +Y +L+K CD A+ ++ MS + G E+Y +LV
Sbjct: 730 CLLLDHMCGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS-ECGFQPQLESYRLLV 787
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
GLC +G F + + ++L Y + +L GL G
Sbjct: 788 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ T + ++ ++ Q G D V Y T++ + C +G + A + +L GL+
Sbjct: 47 DMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTC 106
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + L C GE + A L + G + SY+ + L + + + + M+
Sbjct: 107 NALVLGYCRTGE-LRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMK 165
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P++ + ++ L K G V +A ++ + M + VP+V YN ++ G G
Sbjct: 166 RDGCSPNVRAFTFLISGLCKSGRVGDA-RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRM 224
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A + +K++ ++ GC + TY L+ GLC D + EA +L + + P V T+
Sbjct: 225 NDA-LKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTN 282
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LI G C K +A+ +M+S D+ V+ L+ S+
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 322
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 14/320 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L + R+ E ++DQM +C + I R G+ + A ++ +
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ + KE +LE A L L+ V + + N+L+D
Sbjct: 581 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVAPDVVTYNILIDGCGHMGY 639
Query: 167 SDLALHVFQEMDFQGCYPDRESY-----HILMKGLCNDRRLNEAT-------HLLYSMFW 214
D A + M C P+ +Y H+L L R ++ + + + +
Sbjct: 640 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 699
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R+ + G + Y +L+ C G++++A +L+ + KGL +P + + + C D
Sbjct: 700 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL-SPNEDIYTLLIKCCCDT 758
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ E A S ++ G P L SY + + L NEG + + ++ G+ V +
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 818
Query: 335 EAKLAALFKDGMVDEALEVI 354
+ L K G VD +++
Sbjct: 819 KILNDGLLKAGYVDICFQML 838
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 214/497 (43%), Gaps = 57/497 (11%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYR----HNGPVYASMIGILSESNRITE 63
L+P+ ++ IIK + L + F A K+ R HN +I +L + N
Sbjct: 56 FLSPSIVTYIIKNPPNSLLGFRFFIWA-SKFRRLRSWVSHN-----MIIDMLIKDNGFEL 109
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+V+ ++K F I+ YA+ + +AV F+ + F+C ++NT+L
Sbjct: 110 YWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLH 169
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
MV++ + A ++ R I + ++L+D +C+ ++ AL +F EM +
Sbjct: 170 VMVRKEVVLLALGIYNRML-KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRIL 228
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P++ +Y I++ GLC ++ + A Y +F + G D V Y LL C G++ +
Sbjct: 229 PNKITYTIIISGLCQAQKADVA----YRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDE 284
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ + LK + R+ +D YS +
Sbjct: 285 ALGL--------LKYFEKDRYVLD----------------------------KQGYSCLI 308
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ R + +M P +++Y + L K G +AL ++ E +G
Sbjct: 309 DGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG-L 367
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
VP YN L+KG CD G A ++SK C ++ TY IL+ G+CR G +A
Sbjct: 368 VPDTHCYNALIKGYCDLGLLDEAKSLHLEISKN-DCFSSACTYTILICGMCRSGLVGDAQ 426
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
++ EM +P V T+N LI G C G +A + +M + P + + S A+
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANR 485
Query: 484 CCNTADLNVCRKTLEQL 500
+TA L + +EQL
Sbjct: 486 VLDTASL---QTMVEQL 499
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 172/429 (40%), Gaps = 67/429 (15%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + R + + +M + + ++ ++ ++AG+ +A+ L ++
Sbjct: 304 YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQ 163
+ V T +N L+K L+ A L L C+ S + +L+ +C+
Sbjct: 364 ERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCF-----SSACTYTILICGMCR 418
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY--------SMFWR 215
A +F EM+ GCYP +++ L+ G C + +A L Y S+F R
Sbjct: 419 SGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLR 478
Query: 216 ISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+SQ + D +T++ LCD G I A IL ++ G AP + I +
Sbjct: 479 LSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGF-APNIITYNILIHGFCKA 537
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+I GA L E ++G P +Y + L + R + VLD++ G P +Y
Sbjct: 538 GNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVY 597
Query: 335 EA---------KLAALFK---------DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++ K+ F G E L+ +EE KG VR G
Sbjct: 598 KSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVR-------G 650
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L + M K Q+ Y I + GLC+ GR EA ++ +
Sbjct: 651 LLE--------MDFKLNDFQLA------PYTIWLIGLCQAGRLEEALKI---------FF 687
Query: 437 CVETYNVLI 445
+E +NVL+
Sbjct: 688 TLEEHNVLV 696
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 199/440 (45%), Gaps = 8/440 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L RI + V+D+M C ++ + R G AV +
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++L C + N +L + + ++ A + LR + + + S N ++ LC
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDKA-LHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R + +EM C P+ +++ L+ LC + +L M ++ G
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM----AEHGCTP 295
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E E + L
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEEL 354
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ E + +++ + G + ++L++M G P ++ Y + K
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G++DEA+ +++ G P Y I+LKGLC A A + +M +Q GC N
Sbjct: 415 EGLIDEAVMLLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNP 472
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532
Query: 464 MISQAKLPDISVWSSLVASV 483
M+++ P+ ++SS+ +++
Sbjct: 533 MVNKGMSPNTIIYSSIASAL 552
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 182/390 (46%), Gaps = 24/390 (6%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++I L + + EV+ QM C ++AT I + G L A + +
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP 324
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +NTLLK + + E L F + C +V + N+L+D CQ
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-----TFNILVDFFCQ 379
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + ++M GC PD +Y ++ G C + ++EA LL SM + G
Sbjct: 380 NGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----TACGCKP 435
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKS 282
+ + Y +L LC + DA ++ +++++G P + I+ C G +E A
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-CKKGL-VEQAIE 493
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + +AL
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553
Query: 343 KDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
++G +++ +++ I++ ++ V +YN ++ LC G + A+ +L M GC
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAV----LYNAVISSLCKRGETERAIEFLAYMVSS-GC 608
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEM 429
V N TY IL+ GL +G EA +L E+
Sbjct: 609 VPNESTYTILIRGLASEGFVKEAQEMLTEL 638
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 11/367 (2%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+N ++ + +LE+A R V + ++ LC R AL V EM
Sbjct: 93 YNAMVAGYCRAGQLESAR----RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+GC P YH++++ C A +L + R G D+ +L A+CD
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHAR----GCALDVGNCNLVLNAICD 204
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
QG + A+ +L + G + P + L + + L+ E + P++
Sbjct: 205 QGSVDKALHLLRDLPSFGCE-PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 263
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+++ + L G +VL +M G P + MY + + K+G + A E++
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNR- 322
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M P V YN LLKGLC A L +M + C + T+ ILVD C++G
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDDVTFNILVDFFCQNG 381
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+LE+ML+ P V TY +I G C G EAVM L+ M + P+ ++
Sbjct: 382 LVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 478 SLVASVC 484
++ +C
Sbjct: 442 IVLKGLC 448
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 186/434 (42%), Gaps = 45/434 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + R ++E++++M +C F T I R G + ++
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA 289
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + + T++ + KE L+ AH IL YG +K + N L+ LC R
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG--LKPNVVCYNTLLKGLCSAER 347
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM + C D +++IL+ C + ++ LL M G D++
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVH----GCMPDVI 403
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C +G I +A+ +L+ + G K
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCK----------------------------- 434
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ SY+ + L + R V+ + ++ +M +G + + + + L K G+
Sbjct: 435 -------PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y
Sbjct: 488 VEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIY 545
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+ L R+GR + ++ + + + YN +I LC G+ A+ +L M+S
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605
Query: 467 QAKLPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 606 SGCVPNESTYTILI 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 169/402 (42%), Gaps = 43/402 (10%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ +R G++ +A+++ + + C ++ +L+ + +A + L
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA-VRVLEDL 183
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + NL+++ +C D ALH+ +++ GC PD SY+ ++KGLC +R
Sbjct: 184 HARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 243
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
L+ M + +IV + TL+ LC G + ++L ++ G
Sbjct: 244 GCVQELMEEMV----RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT----- 294
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
P + Y+ + + EG + ++L+ M
Sbjct: 295 -------------------------------PDIRMYATIIDGICKEGHLKVAHEILNRM 323
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ G P++V Y L L +E E++ E K + V +NIL+ C G
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNGL 382
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
+ L++M GC+ + TY +++G C++G EA +L+ M P +Y
Sbjct: 383 VDRVIELLEQMLVH-GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++++GLCS + +A + +MI Q + +++L+ +C
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 16/301 (5%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++ G C +L A L ++ + Y ++ ALC +G+I DA+ +L
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV-------PVPPNAYTYFPVVRALCARGRIADALAVL 145
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ R+G H I C G A ++ + RG + + + + + +
Sbjct: 146 DEMPRRGCAPIPPMYHVILEAACRGG-GFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 204
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD---GMVDEALEVIEEEMVKGTFVP 365
+G + + +L ++ + G P +V Y A L L G V E +E EMV+ P
Sbjct: 205 QGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME----EMVRMACPP 260
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ +N L+ LC G L +M++ GC + Y ++DG+C++G A +
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEH-GCTPDIRMYATIIDGICKEGHLKVAHEI 319
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
L M P V YN L++GLCS + E L EM + D ++ LV C
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379
Query: 486 N 486
N
Sbjct: 380 N 380
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 34/434 (7%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + G L EA +F+ + + V S N L + K+ A I+ R
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + S N+++ +CQ R A H+ M+ +G PD SY ++ G C
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 202 LNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYRT 230
L++ L+ M F + ++G D V+Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C +G I+ A + ++ + + I C G+ +E K L +E +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMFCK 415
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +++ + G + + +V + M G P++V Y + L K+G +D A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E++ EM K P + YN ++ GLC +GN AV + + + G A+ TY L+
Sbjct: 476 NELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLM 533
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D C+ G +A +L+EML + P + T+NVL+ G C G + L M+++
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 471 PDISVWSSLVASVC 484
P+ + ++SLV C
Sbjct: 594 PNATTFNSLVKQYC 607
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 151 IQSLNLLMDVLCQ-CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ S N+ + L + C ++ A+ VF+E G + SY+I++ +C R+ EA HLL
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M KG D++ Y T++ C G++ +++E + RKGLK I
Sbjct: 270 LLM----ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C + E A+ +E + +G +P Y+ + G I K EM ++ P
Sbjct: 326 LCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++ Y A ++ + G + EA ++ E KG P + L+ G C AG+ A
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M Q GC N TY L+DGLC++G A+ +L EM P + TYN ++ GLC
Sbjct: 444 HNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
G EAV + E + D +++L+ + C + +++ ++ L+++
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY-CKSGEMDKAQEILKEM 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 201/472 (42%), Gaps = 18/472 (3%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
YL+++ K TA+ +F+E E + N Y +I + + RI E ++ M+
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
++T + Y R G+L++ L + + + + + +++ + + KL
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--CRRSDL--ALHVFQEMDFQGCYPDRES 188
A + ++ I ++ L C+R D+ A F EM + PD +
Sbjct: 334 EAE-----EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y ++ G C + EA L + MF KG D V + L+ C G ++DA ++
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFC----KGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ G + C +G D++ A L++E G P++ +Y+++ L
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G I E K++ E G V Y + A K G +D+A E+++E + KG PT+
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIV 562
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+N+L+ G C G L M + G N T+ LV C A+ + ++
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M R P +TY L++G C EA +EM + +S +S L+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 186/430 (43%), Gaps = 10/430 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++++ + ++ ++I+ MK + ++ + I R +L EA F +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + T + TL+ K + AA F + ++ + + ++ CQ
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F EM +G PD ++ L+ G C + +A + M Q G ++V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI----QAGCSPNVVT 458
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ LC +G + A ++L ++ + GL+ + I C G +IE A L+ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG-NIEEAVKLVGEF 517
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G +Y+ + G + + ++L EM KG P++V + + GM+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETY 406
++ +++ + KG P +N L+K C N A K M S+ VG +G+TY
Sbjct: 578 EDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG--PDGKTY 634
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LV G C+ EA + +EM + + V TY+VLI+G K EA ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 467 QAKLPDISVW 476
+ D ++
Sbjct: 695 EGLAADKEIF 704
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 14/274 (5%)
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC----- 271
+ K G D ++ L D G +++A ++ EK+L GL +D C
Sbjct: 167 TYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS------VDSCNVYLTRL 220
Query: 272 -NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
D A + E G ++ASY+ + + GRI E +L M KG+ P
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y + + G +D+ ++IE KG P +Y ++ LC A A
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M +Q G + + Y L+DG C+ G AS+ EM R P V TY +I G C
Sbjct: 340 SEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
IG EA EM + PD ++ L+ C
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 45/352 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + E ++ +M E F I Y +AG + +A + ++
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ TL+ + KE L++A+ L L + ++ I + N +++ LC+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANEL-LHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ + E + G D +Y LM C +++A +L M KG IV
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML----GKGLQPTIV 562
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR-----------RHRI--------D 267
+ L+ C G ++D ++L +L KG+ AP + R+ + D
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-APNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 268 LCPCNDGED----------------IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+C G D ++ A L E +G S+++YS + +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 312 IVEGDKVLDEMRTKGFWPSLVMY----EAKLAALFKDGMVDEALEVIEEEMV 359
+E +V D+MR +G ++ + K D +VD E+IE +V
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 8/367 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TLL + K + A I LR + + N ++D LC+ + + A + E
Sbjct: 239 SYGTLLNGLCKIGETRCA-IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTE 297
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +G +PD +Y L+ G C +L A +S+ ++ K D+ Y L+ ALC
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGA----FSLLNEMTLKNINPDVYTYTILIDALC 353
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+GK+++A +L + ++G+K + C GE + AK + + + PS+
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE-VHNAKQIFHAMVQTEVNPSV 412
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY+ M L + E +L EM K P+ V Y + + L K G + AL++++E
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+G + Y LL GLC N A+ KM K+ G N TY L+DGLC+
Sbjct: 473 LHHRGQPADVI-TYTSLLDGLCKNQNLDKAIALFMKM-KERGIQPNKYTYTALIDGLCKG 530
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R A ++ + +L++ V TYNV+I GLC G EA+ +M +PD +
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590
Query: 477 SSLVASV 483
++ S+
Sbjct: 591 EIIIRSL 597
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 194/438 (44%), Gaps = 10/438 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++G L + + QM+ E + I + GQ+ + S+ +
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKIL 194
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T TL+K + + +++ + + F + S L++ LC+ +
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKS-LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET 253
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + + ++ + PD Y+ ++ GLC D+ +NEA Y + ++ +G D++
Sbjct: 254 RCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA----YDFYTEMNSRGIFPDVIT 309
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
Y TL+ C G++ A +L ++ K + P + I + C +G+ ++ AK+L+
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNIN-PDVYTYTILIDALCKEGK-LKEAKNLLGV 367
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P++ +YS + G + ++ M PS+ Y + L K
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEA+ ++ E M+ VP YN L+ GLC +G A+ +K++ + G A+ TY
Sbjct: 428 VDEAMNLLRE-MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR-GQPADVITY 485
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC++ +A + +M R P TY LI GLC + A + ++
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILV 545
Query: 467 QAKLPDISVWSSLVASVC 484
+ D+ ++ ++ +C
Sbjct: 546 KGCCIDVYTYNVMIGGLC 563
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 177/401 (44%), Gaps = 28/401 (6%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++AVS F + F +L +VK A I + ++ + +L+
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTA-ISLSKQMEVKGIEPDLVTLS 171
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C + + V ++ G P+ LMKGLC + ++ H +
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHF----HDK 227
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G + V Y TLL LC G+ + A+++L I + R R D+ N
Sbjct: 228 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMI--------EDRSTRPDVVMYNTII 279
Query: 276 DIEGAKSLINEAL-------IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
D L+NEA RG P + +YS + G+++ +L+EM K
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339
Query: 329 PSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P + Y + AL K+G + EA L V+ +E VK P V Y+ L+ G C G
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK----PNVVTYSTLMDGYCLVGEVHN 395
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A M Q + +Y I+++GLC+ EA +L EML ++ P TYN LI
Sbjct: 396 AKQIFHAMV-QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI 454
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GLC G+ A+ ++E+ + + D+ ++SL+ +C N
Sbjct: 455 DGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 195/438 (44%), Gaps = 24/438 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ N + +++ L + + D++ + + T + + G+ A+
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLN 155
L + + + +NT++ + K+ + A+ + E+ SR + + +
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY------TEMNSRGIFPDVITYS 311
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ C + A + EM + PD +Y IL+ LC + +L EA +LL M
Sbjct: 312 TLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM--- 368
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+++G ++V Y TL+ C G++ +A QI +++ + P + I + G+
Sbjct: 369 -TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN-PSVCSYNIMINGLCKGK 426
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A +L+ E L + +P+ +Y+++ L GRI ++ E+ +G ++ Y
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L L K+ +D+A+ + + +G P Y L+ GLC A +K+ +
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERG-IQPNKYTYTALIDGLCKGARLKNA----QKLFQ 541
Query: 396 QV---GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ GC + TY +++ GLC++G EA + +M P T+ ++IR L
Sbjct: 542 HILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD 601
Query: 453 KQYEAVMWLEEMISQAKL 470
+ +A L EMI++ L
Sbjct: 602 ENDKAEKLLHEMIAKGLL 619
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 204/444 (45%), Gaps = 16/444 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L RI + V+D+M C ++ + R G AV +
Sbjct: 158 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 217
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++L C + N +L + + + EA H+L +G E + S N ++ LC
Sbjct: 218 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE--PDVVSYNAVLKGLC 275
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+R + +EM C P+ +++ L+ LC + +L M + G
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV----EHGCT 331
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI +Y T++ +C +G ++ A +IL ++ GLK P + L E E +
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEE 390
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV---LDEMRTKGFWPSLVMYEAKLA 339
L+ E + +++ + +D + + +V D+V L++M G P ++ Y +
Sbjct: 391 LLAEMFDKDCPLDDVTFNIL-VDFFCQNGLV--DRVIELLEQMLEHGCMPDVITYTTVIN 447
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K+G++DEA+ +++ G P Y I+LKGLC A A + +M +Q GC
Sbjct: 448 GFCKEGLIDEAVMLLKSMTACGC-KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GC 505
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N T+ L++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA+
Sbjct: 506 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 565
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
L M+++ P+ ++SS+ +++
Sbjct: 566 LLNVMVNKGMSPNTIIYSSIASAL 589
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 24/391 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + EV+ QM C ++AT I + G L A + +
Sbjct: 301 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ +NTLLK + + E L F + C +V + N+L+D C
Sbjct: 361 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-----TFNILVDFFC 415
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
Q D + + ++M GC PD +Y ++ G C + ++EA LL SM + G
Sbjct: 416 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM----TACGCK 471
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y +L LC + DA ++ +++++G P + I+ C G +E A
Sbjct: 472 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-CKKGL-VEQAI 529
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + +AL
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 342 FKDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
++G +++ +++ I++ ++ V +YN ++ LC G + A+ +L M G
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAV----LYNAVISSLCKRGETERAIEFLAYMVSS-G 644
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEM 429
CV N TY IL+ GL +G EA +L E+
Sbjct: 645 CVPNESTYTILIRGLASEGFVKEAQEMLTEL 675
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 11/367 (2%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+N ++ + +LE+A R V + ++ LC R AL V EM
Sbjct: 130 YNAMVAGYCRAGQLESAR----RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+GC P YH++++ C A +L + R G D+ +L A+CD
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHAR----GCALDVGNCNLVLNAICD 241
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
QG + +A+ +L + G + P + L + + L+ E + P++
Sbjct: 242 QGSVDEALHLLRDLPSFGCE-PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 300
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+++ + L G +VL +M G P + MY + + K+G ++ A E++
Sbjct: 301 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR- 359
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M P V YN LLKGLC A L +M + C + T+ ILVD C++G
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDDVTFNILVDFFCQNG 418
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+LE+ML P V TY +I G C G EAVM L+ M + P+ ++
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478
Query: 478 SLVASVC 484
++ +C
Sbjct: 479 IVLKGLC 485
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 186/434 (42%), Gaps = 45/434 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + R ++E++++M +C F T I R G + +
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 326
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + + T++ + KE LE AH IL YG +K + N L+ LC R
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG--LKPNVVCYNTLLKGLCSAER 384
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM + C D +++IL+ C + ++ LL M + G D++
Sbjct: 385 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML----EHGCMPDVI 440
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C +G I +A+ +L+ + G K
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCK----------------------------- 471
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ SY+ + L + R V+ + ++ +M +G + + + + L K G+
Sbjct: 472 -------PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y
Sbjct: 525 VEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIY 582
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+ L R+GR + ++ + + + YN +I LC G+ A+ +L M+S
Sbjct: 583 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 642
Query: 467 QAKLPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 643 SGCVPNESTYTILI 656
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 171/403 (42%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +R G++ +A+++ + + C ++ +L+ + +A + L
Sbjct: 161 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA-VRVLED 219
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + NL+++ +C D ALH+ +++ GC PD SY+ ++KGLC +R
Sbjct: 220 LHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 279
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ M + +IV + TL+ LC G + ++L +++ G
Sbjct: 280 WGCVQELMEEMV----RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT---- 331
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P + Y+ + + EG + ++L+
Sbjct: 332 --------------------------------PDIRMYATIIDGICKEGHLEVAHEILNR 359
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + G P++V Y L L +E E++ E K + V +NIL+ C G
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNG 418
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ L++M + GC+ + TY +++G C++G EA +L+ M P +Y
Sbjct: 419 LVDRVIELLEQMLEH-GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++++GLCS + +A + +MI Q + +++L+ +C
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 520
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++ G C +L A L ++ + Y ++ ALC +G+I DA+ +L
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV-------PVPPNAYTYFPVVRALCARGRIADALAVL 182
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ R+G H I C G A ++ + RG + + + + + +
Sbjct: 183 DEMPRRGCAPIPPMYHVILEAACRGG-GFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 241
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD---GMVDEALEVIEEEMVKGTFVP 365
+G + E +L ++ + G P +V Y A L L G V E +E EMV+ P
Sbjct: 242 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME----EMVRMACPP 297
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ +N L+ LC G L +M + GC + Y ++DG+C++G A +
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEH-GCTPDIRMYATIIDGICKEGHLEVAHEI 356
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
L M P V YN L++GLCS + E L EM + D ++ LV C
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 416
Query: 486 N 486
N
Sbjct: 417 N 417
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 180/373 (48%), Gaps = 17/373 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
++N ++ K +++E+A + R + +V + N+++ C + DLAL V
Sbjct: 46 AYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTH----NIMIGTFCGKGKIDLALKV 101
Query: 174 FQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
F+E+ C P +Y IL++ + ++EA LL M R G D Y +
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR----GLEPDTFTYNVIT 157
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRG 291
LC +GK+ A + + + +G K P + I L N G+ EG K ++E RG
Sbjct: 158 RGLCKEGKVDRAFEFVRTLNSRGCK-PDVITYNILLRALLNQGKWDEGEK-WMSEIFSRG 215
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +YS + L +G+I E ++ M+ KG P Y+ +AA ++G +D A+
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E ++ + G F+P + YN ++ LC GN AV K+ +VGC N +Y ++
Sbjct: 276 EFLDCMICDG-FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD-EVGCPPNVSSYNTMLS 333
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
L G A ++ +ML + P V TYN LI LC G EA+ L +M+S P
Sbjct: 334 ALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 393
Query: 472 DISVWSSLVASVC 484
+I + +++ +C
Sbjct: 394 NIVSYKTVLLGLC 406
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 198/447 (44%), Gaps = 49/447 (10%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
+H P Y ++I ++NRI K V+D+MK I T+ G+++
Sbjct: 38 KHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDL 97
Query: 99 AVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
A+ +F+ L NC ++ L++ + E +
Sbjct: 98 ALKVFEELLKDNNCKPTLITYTILIEAYILEGGI-------------------------- 131
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
D AL + EM +G PD +Y+++ +GLC + +++ A + ++ +
Sbjct: 132 ----------DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL----N 177
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGED 276
+G D++ Y LL AL +QGK + + + +I +G + P + I + C DG+
Sbjct: 178 SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCE-PNVVTYSILISSLCRDGK- 235
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE + +L+ +G P Y + EG++ + LD M GF P +V Y
Sbjct: 236 IEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+AAL K+G D A+E+ + G P V YN +L L +G+ A+ + +M +
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGC-PPNVSSYNTMLSALWSSGDRYRALGMISQMLSK 354
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + TY L+ LCRDG EA +L +ML + P + +Y ++ GLC + +
Sbjct: 355 -GIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASV 483
A+ L MI P+ + ++ L+ +
Sbjct: 414 AIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 181/382 (47%), Gaps = 9/382 (2%)
Query: 51 MIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
MIG +I +V +++ K ++C+ + I Y G ++EA+ L +
Sbjct: 85 MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR 144
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
T ++N + + + KE K++ A F+R+ K + + N+L+ L + D
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRA-FEFVRTLNSRGCKPDVITYNILLRALLNQGKWDE 203
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
E+ +GC P+ +Y IL+ LC D ++ E+ +L+ M +KG D Y
Sbjct: 204 GEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM----KEKGLTPDAYCYD 259
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ A C +GK+ A++ L+ ++ G + I C +G + A + +
Sbjct: 260 PLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG-DHAVEIFGKLDE 318
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+++SY+ M L++ G ++ +M +KG P ++ Y + ++ L +DGMVDE
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ ++ + M+ G F P + Y +L GLC A A+ L M + GC N TY +L
Sbjct: 379 AIGLLAD-MLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIEN-GCQPNETTYTLL 436
Query: 410 VDGLCRDGRFLEASRVLEEMLI 431
++G+ G +A + + I
Sbjct: 437 IEGIGFSGSRTQAMELANSLYI 458
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 14/311 (4%)
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
D+Q PD L+KG N R +++AT ++ I +K D+ Y ++ C
Sbjct: 5 DYQ---PDVILCTKLIKGFFNSRNIDKATRVM-----GILEKHGKPDVFAYNAVISGFCK 56
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-PS 295
+I+ A +L+++ RKG +P H I + C G+ I+ A + E L P+
Sbjct: 57 ANRIESAKTVLDRMKRKGF-SPDVVTHNIMIGTFCGKGK-IDLALKVFEELLKDNNCKPT 114
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
L +Y+ + EG I E K+LDEM ++G P Y L K+G VD A E +
Sbjct: 115 LITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVR 174
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+G P V YNILL+ L + G ++ ++ + GC N TY IL+ LCR
Sbjct: 175 TLNSRGC-KPDVITYNILLRALLNQGKWDEGEKWMSEIFSR-GCEPNVVTYSILISSLCR 232
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
DG+ E+ +++ M + P Y+ LI C GK A+ +L+ MI LPDI
Sbjct: 233 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN 292
Query: 476 WSSLVASVCCN 486
+++++A++C N
Sbjct: 293 YNTIMAALCKN 303
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGN--SAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
MV + P V + L+KG ++ N A VM + + + A Y ++ G C+
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFA----YNAVISGFCK 56
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDIS 474
R A VL+ M + + P V T+N++I C GK A+ EE++ P +
Sbjct: 57 ANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLI 116
Query: 475 VWSSLVAS 482
++ L+ +
Sbjct: 117 TYTILIEA 124
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L ++ E+ ++ C S + T + +G A+ + +
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQML 352
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N+L+ + ++ ++ A I L + I S ++ LC+ R
Sbjct: 353 SKGIDPDVITYNSLISCLCRDGMVDEA-IGLLADMLSGRFQPNIVSYKTVLLGLCKAHRI 411
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
D A+ V M GC P+ +Y +L++G+ +A L S++
Sbjct: 412 DDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLY 457
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 172/376 (45%), Gaps = 14/376 (3%)
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ V++T N KE + H + R + + + N ++ LC+ + D
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRG-----ILPDVVTYNSIIAALCKAQAMDK 249
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ V M G PD +Y+ ++ G C+ + EA L M G D+V Y
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM----RSDGVEPDVVTYS 305
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ LC G+ +A +I + + ++GLK + + G +E L + ++
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMV 363
Query: 290 RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R GI P +S + N+G++ + V +MR +G P+ V Y A + L K G V+
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A+ + E+M+ P VYN L+ GLC A + +M + C+ N +
Sbjct: 424 DAM-LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNS 481
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++D C++GR +E+ ++ E M+ P V TYN LI G C GK EA+ L M+S
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 469 KLPDISVWSSLVASVC 484
P+ +S+L+ C
Sbjct: 542 LKPNTVTYSTLINGYC 557
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 38/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R+++ G ++ Y LL LCD+ + Q+A+++L +
Sbjct: 142 MDIV---LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM-------------- 184
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+D G G P + SY+ + + EG + EM +
Sbjct: 185 --------ADDRGG-----------GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + +AAL K +D+A+EV+ MVK +P YN +L G C +G
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM + G + TY +L+D LC++GR +EA ++ + M R P + TY L+
Sbjct: 285 AIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ PD V+S L+ +
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 10/396 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 152 QSLNLLMDVLCQCRRSDLA---LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
S N+L+ LC RS A LH+ + G PD SY ++ G + ++A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA--- 215
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
YS + + +G D+V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 216 -YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C+ G+ E A + + G P + +YS + L GR +E K+ D M +G
Sbjct: 275 GYCSSGQPKE-AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y L G + E + + + MV+ P V++IL+ + G A++
Sbjct: 334 PEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAML 392
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
KM +Q G N TYG ++ LC+ GR +A E+M+ P YN LI GL
Sbjct: 393 VFSKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C+ K A + EM+ + + ++S++ S C
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 179/405 (44%), Gaps = 8/405 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ + I +A +++A+ + + + + ++N++L + + A I FL+
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA-IGFLKK 291
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V+ + + +LLMD LC+ R A +F M +G P+ +Y L++G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L E LL M + G D ++ L+ A +QGK+ AM + K+ ++GL
Sbjct: 352 LVEMHGLLDLMV----RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G +E A + + G P Y+++ L + ++++ E
Sbjct: 408 TYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G + + + + + + K+G V E+ E + E MV+ P V YN L+ G C AG
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ L M VG N TY L++G C+ R +A + +EM P + TY
Sbjct: 526 KMDEAMKLLSGMV-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N++++GL + A + ++S ++ ++ +C N
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 194/431 (45%), Gaps = 18/431 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ S + E + +M+ D E ++ + + G+ EA +F ++
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL----C 162
++ ++ TLL+ + L H L V++ I + + +L
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLL-----DLMVRNGIHPDHYVFSILICAYA 382
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ D A+ VF +M QG P+ +Y ++ LC R+ +A +LY F ++ +G
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLY--FEQMIDEGLS 438
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++Y +L+ LC K + A +++ ++L +G+ + I C +G IE K
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK- 497
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E ++R G+ P++ +Y+ + G++ E K+L M + G P+ V Y +
Sbjct: 498 -LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K +++AL V+ +EM P + YNI+L+GL +A A ++++ G
Sbjct: 557 CKISRMEDAL-VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES-GTQI 614
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY I++ GLC++ +A ++ + + + T+N++I L +G+ EA
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 462 EEMISQAKLPD 472
S +P+
Sbjct: 675 VAFSSNGLVPN 685
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 176/404 (43%), Gaps = 34/404 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L ++ R E +++ D M + + + + T ++ YA G L E L +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------LLMD 159
+ F+ L+ + K++ A ++F K R Q LN ++
Sbjct: 363 VRNGIHPDHYVFSILICAYANQGKVDQAMLVF--------SKMRQQGLNPNAVTYGAVIG 414
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+LC+ R + A+ F++M +G P Y+ L+ GLC + A L+ M R
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---- 470
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + + + +++ + C +G++ ++ ++ E ++R G+K + + C G+ ++
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK-MDE 529
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L++ + G P+ +YS + R+ + + EM + G P ++ Y L
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
LF+ A E+ GT + + YNI+L GLC + A+ + + C
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIE-LSTYNIILHGLCKNKLTDDALQMFQNL-----C 643
Query: 400 VAN----GETYGILVDGLCRDGRFLEASRVL----EEMLIRSYW 435
+ + T+ I++D L + GR EA + L+ +YW
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG----IPSLA 297
+DA + +++LR+G A +R + D A + R G P L
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNR---ALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + GR+ G L + KGF + + L L D +A++++
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVDGLCR 415
M + +P V YNILLKGLCD S A+ L M+ G + + +Y +++G +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G +A EML R P V TYN +I LC +A+ L M+ +PD
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 476 WSSLVASVC 484
++S++ C
Sbjct: 269 YNSILHGYC 277
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 154/369 (41%), Gaps = 46/369 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS----------- 75
A+ +F + +++ N N Y ++IGIL +S R+ + +QM +
Sbjct: 390 AMLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 76 ----CEC--------------------KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
C C F + I ++ + G++ E+ LF+ + +
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
++NTL+ K++ A L L +K + + L++ C+ R + AL
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKL-LSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+F+EM+ G PD +Y+I+++GL RR A L + RI++ G+ ++ Y +
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL----YVRITESGTQIELSTYNII 622
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
L LC DA+Q+ + + LK + + G + E AK L G
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE-AKDLFVAFSSNG 681
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA- 350
+P+ +Y MA ++ +G + E D++ M G M + L + G + A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 351 --LEVIEEE 357
L +I+E+
Sbjct: 742 TYLSMIDEK 750
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 221/505 (43%), Gaps = 48/505 (9%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
+I + +P L F A + N Y+S++ ++ + +E++ V++ MK +
Sbjct: 65 VIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNF 124
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAH 135
+ + I YA G +++AV +F + + +NC + N+LL +VK K++ A
Sbjct: 125 KPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVAC 184
Query: 136 ILFLRSC-----YGWEVKSRIQSLNLLMDVLCQ--------------------------- 163
L+ + +G ++ S+ +++ LC
Sbjct: 185 ELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYN 244
Query: 164 ------CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
C++ DL A VF+E+ +G P E+Y L+ G C + LL M
Sbjct: 245 VIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEM--- 301
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ G ++ ++ +++ A G + A +++ + G + P + I + G
Sbjct: 302 -NVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCE-PDITTYNILINFSCSGG 359
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
I+ A+ + A R +P+ SY+ + +G V +L ++ G P LV Y
Sbjct: 360 RIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYG 419
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A + G +D AL V E+ M KG F P ++YN+L+ GLC G A + L +M
Sbjct: 420 AFIHGSVAGGEIDVALMVREKMMEKGVF-PDAQIYNVLMSGLCKKGRFPAAKLLLSEML- 477
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ + Y LVDG R+ +A+ + E ++ + P V YNV+I+GLC GK
Sbjct: 478 DLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMT 537
Query: 456 EAVMWLEEMISQAKLPDISVWSSLV 480
+AV ++ +M PD S+++
Sbjct: 538 DAVSYVNKMKIANHAPDEYTHSTVI 562
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 183/461 (39%), Gaps = 43/461 (9%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + ++ E +++ID G+ C + I Y + G L A +F+ L +
Sbjct: 215 LCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPT 274
Query: 115 TQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+++ L+ K K + +L + G V ++ N ++D + D A +
Sbjct: 275 LETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKV--FNSIIDAKYKYGLVDKAAEM 332
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+ M GC PD +Y+IL+ C+ R+ EA L R ++ + Y L+
Sbjct: 333 MRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFL----ERAKERTLLPNKFSYTPLMH 388
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
A C QG A +L KI G K P + + G +I+ A + + + +G
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDK-PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF 447
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P Y+ + L +GR +L EM P MY + ++ +D+A E+
Sbjct: 448 PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATEL 507
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS------------------- 394
E M KG P V YN+++KGLC G AV Y+ KM
Sbjct: 508 FEVVMSKG-IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYV 566
Query: 395 ---------KQVGCV------ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
K G + N Y L++G C+ A +V M + P V
Sbjct: 567 KQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVV 626
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY +LI G GK +A + E M+ LP+ + + L+
Sbjct: 627 TYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLI 667
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 182/457 (39%), Gaps = 28/457 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+ S+I + + + E++ M CE + + I G++ EA
Sbjct: 309 NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFL 368
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + + S+ L+ K+ + A+ +LF + G K + S +
Sbjct: 369 ERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGD--KPDLVSYGAFIHGSV 426
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D+AL V ++M +G +PD + Y++LM GLC R A LL M Q
Sbjct: 427 AGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQ---- 482
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEG 279
D +Y TL+ ++ A ++ E ++ KG+ P + + LC C D
Sbjct: 483 PDAYMYATLVDGFIRNNELDKATELFEVVMSKGID-PGVVGYNVMIKGLCKCGKMTD--- 538
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S +N+ I P ++S + + + K+ +M + + P++V Y + +
Sbjct: 539 AVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLIN 598
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K + A E + M P V Y IL+ G G A + + M C
Sbjct: 599 GFCKIADMSRA-EKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMN-NC 656
Query: 400 VANGETYGILVDGLCR---DGRFLEASRVLEEMLIRSYWPC---------VETYNVLIRG 447
+ N T+ L++GL +E + + LI ++ + TYN +I
Sbjct: 657 LPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVC 716
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G A + +M+ + L D +S+L+ +C
Sbjct: 717 LCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLC 753
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/259 (16%), Positives = 99/259 (38%), Gaps = 42/259 (16%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + + +YA+++ +N + + E+ + + + + I+ + G++ +A
Sbjct: 480 NLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDA 539
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--------------------- 138
VS + N + +T++ VK+ L++A +F
Sbjct: 540 VSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLING 599
Query: 139 -------------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
R+ + ++ + + +L+ + + + A F+ M C P+
Sbjct: 600 FCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPN 659
Query: 186 RESYHILMKGLCN--------DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
++H L+ GL N ++ L+ F + +G + I Y +++ LC
Sbjct: 660 DTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCK 719
Query: 238 QGKIQDAMQILEKILRKGL 256
G + A + K+LRKG
Sbjct: 720 HGMVDTAQLLQTKMLRKGF 738
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 142/374 (37%), Gaps = 23/374 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ +Y ++ L + R K ++ +M + + ++AT + + R +L++A LF
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELF 508
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +N ++K + K K+ A + ++ + + ++D +
Sbjct: 509 EVVMSKGIDPGVVGYNVMIKGLCKCGKMTDA-VSYVNKMKIANHAPDEYTHSTVIDGYVK 567
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D AL +F +M Q P+ +Y L+ G C ++ A + +R Q + E
Sbjct: 568 QHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKV-----FRAMQSFNLE 622
Query: 224 -DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID-----------LCPC 271
++V Y L+ GK + A E +L + H + L
Sbjct: 623 PNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEK 682
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
N+ D + G +A+Y+++ + L G + + +M KGF
Sbjct: 683 NEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDS 742
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V + A L L + G E +I ++ K F L K L D S + + L
Sbjct: 743 VCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLN 802
Query: 392 -----KMSKQVGCV 400
K+S Q G V
Sbjct: 803 LIEDSKLSDQQGEV 816
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 217/497 (43%), Gaps = 78/497 (15%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++F E K + R N Y+ +I L E+ R+ E ++ +M C+ +
Sbjct: 182 AFRVF-EKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-------- 138
I+ G ++A+ + ++ CV ++ L+ + +E K+E A+ +F
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300
Query: 139 ---------LRSCY---GWEV--------------KSRIQSLNLLMDVLCQCRRSDLALH 172
L + Y GW V K I++ N LM+ LC+ +S A
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ + + G PDR +Y+IL+ G C + +LN A +++F ++ G D + L+
Sbjct: 361 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA----FNIFNSMNSAGLEPDGFTFTALI 416
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC G+++ A IL +++KG+ +
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDE-------------------------------- 444
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+++A+ G+ + + + M + + L AL KD ++EA
Sbjct: 445 ----VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 500
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++ + M+K VP+V + IL++G C AG +A+++ L++M KQ GC N TY I+++G
Sbjct: 501 MLGK-MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM-KQAGCSPNVYTYTIIING 558
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC +GR EA +L M P TY VL++ G+ A + M+ P+
Sbjct: 559 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 618
Query: 473 ISVWSSLVAS-VCCNTA 488
++S+L++ V NTA
Sbjct: 619 SHIYSALLSGFVLSNTA 635
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 149/292 (51%), Gaps = 10/292 (3%)
Query: 196 LCNDRR--LNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKIL 252
L N RR L EA + +F ++S++ S + V Y L+ LC+ G++++A Q+ ++++
Sbjct: 171 LANCRRDDLGEA----FRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 226
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG + P +R + + + D + A +++E + +P++ +Y+ + L EG+I
Sbjct: 227 EKGCQ-PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 285
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E + V +M G P ++ + A + K+G V A +++ M KG P +R YN
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV-MEKGNCKPNIRTYNE 344
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L++GLC S A + L+++ G + + TY ILVDG C++G+ A + M
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDN-GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 403
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P T+ LI GLC +G+ +A L M+ + D +++L+ C
Sbjct: 404 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 206/521 (39%), Gaps = 65/521 (12%)
Query: 10 TPTYLSQIIKKQKSPLT--ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMK 65
T TY I K +T A+K+ E K PN Y +I L +I E
Sbjct: 234 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH----TYTILIDRLCREGKIEEAN 289
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V +M F I Y + G + A L + + NC +++N L++ +
Sbjct: 290 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 349
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ SK A +L R + R+ + N+L+D C+ + ++A ++F M+ G PD
Sbjct: 350 CRVSKSYKAFLLLRRVVDNGLLPDRV-TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD-- 243
++ L+ GLC RL +A +L SM +KG D V + L+ C GK +D
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMV----KKGISLDEVTFTALIDGHCKIGKAKDVC 464
Query: 244 ---------------------------------AMQILEKILRKGLKAPKSRRHRIDL-C 269
A +L K+++ GL P H I +
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL-VPSVVTHTILIEG 523
Query: 270 PCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE K L E + + G P++ +Y+ + L N GR+ E + +L M + G
Sbjct: 524 HCRAGETALSLKML--ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ Y + A K G +D A +++ MVK P +Y+ LL G N+A+
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVST-MVKNGCQPNSHIYSALLSGFV-LSNTAIGAR 639
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-----PCVETYNV 443
L + E D C V + IR P + YN
Sbjct: 640 ALSSTGDLDARSLSSEEN----DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNF 695
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GLC G+ EA ++M+ PD ++ SS++ C
Sbjct: 696 LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYC 735
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 35/368 (9%)
Query: 140 RSCYGWEVKSRIQSLNLLMD-------------VLCQCRRSD-------LALHVFQEMDF 179
+S Y +++ RIQ L +L+ ++ +C S+ AL E+ F
Sbjct: 30 QSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGF 89
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ YP Y L+ L +LN + + ++ R+ +G + YRT++ ALC G
Sbjct: 90 RLSYP---CYSTLLMCLA---KLNMG-FVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG 142
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPC---NDGEDIEGAKSLINEALIRGGIPSL 296
+Q A K+LR G + L C + GE + + E R P+
Sbjct: 143 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCR---PNS 199
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS + L GR+ E ++ EM KG PS Y + A GM D+A+++++E
Sbjct: 200 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 259
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
K VP V Y IL+ LC G A +KM K G T+ L++G C++
Sbjct: 260 MATKAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIITFNALINGYCKE 317
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G + A ++L M + P + TYN L+ GLC + K Y+A + L ++ LPD +
Sbjct: 318 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 377
Query: 477 SSLVASVC 484
+ LV C
Sbjct: 378 NILVDGFC 385
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G + ++I L + R+ + ++ M + F I + + G+ + LF
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+N+ + C+ +FN L + K+ KL A+ + L + + + + +L++ C+
Sbjct: 468 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM-LGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ L+L + + M GC P+ +Y I++ GLCN+ R+ EA +L+SM S G
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM----SSFGVSP 582
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ A G++ A QI+ +++ G + P S + L GA++L
Sbjct: 583 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ-PNSHIYSALLSGFVLSNTAIGARAL 641
Query: 284 ------------------------------------INEALIRGGIPSLASYSAMAIDLY 307
I + + + G+P+ Y+ + + L
Sbjct: 642 SSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLC 701
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
EGRI+E D++ +M G +P + + + K D LE + + ++ FVP+
Sbjct: 702 KEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM-KLVLDNKFVPSF 759
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
Y ++ GL + G A + + + G
Sbjct: 760 ASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 790
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 7/330 (2%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N ++ C+ + + A V M +G PD +Y+I++ LCN R+L A +L +
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++ Y L+ A +G I +AM++LE++L +GL + I C +G
Sbjct: 211 ----DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 266
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+E A LI +G P + SY+ + N+G+ EG+K++ EM ++G P+ V Y
Sbjct: 267 M-VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 325
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+++L + G +DEA+ V++ M++ P Y+ L+ LC G +A+ + M
Sbjct: 326 SILISSLCRFGRIDEAISVLKV-MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
GC+ + Y ++ LC++G +A + ++ P V +YN +I L S G +
Sbjct: 385 SN-GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ + MIS+ PD ++SL++ +C
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLC 473
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 18/335 (5%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C+ + + +L+ + + +G PD L+KG N + + +A+ ++ I
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-----EI 138
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ + D+ Y ++ C +I+ A Q+L ++ +G P + I + +
Sbjct: 139 LESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGF-LPDIVTYNIMIGSLCNRRK 197
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A +++++ L+ +P++ +Y+ + EG I E K+L+EM +G P + Y A
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK-----GLCDAGNSAVAVMYLK 391
+ + K+GMV+ A E+I KG P V YNILL+ G D G VA M+ +
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGC-EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
GC N TY IL+ LCR GR EA VL+ M+ + P +Y+ LI LC
Sbjct: 317 ------GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ A+ ++ MIS LPDI +++++A++C N
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 405
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 187/408 (45%), Gaps = 55/408 (13%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLAL 171
++N ++ K +++EAA + R +K+R I + N+++ LC R+ LAL
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNR------MKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V ++ C P +Y IL++ + +NEA LL M R G D+ Y +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR----GLLPDMYTYNAI 258
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIR 290
+ +C +G ++ A +++ + KG + P + I L N G+ EG K L+ E R
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCE-PDVISYNILLRAFLNQGKWDEGEK-LVAEMFSR 316
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P+ +YS + L GRI E VL M K P Y+ ++AL K+G +D A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-------- 402
+ +++ M+ +P + YN +L LC GN+ A+ K+ + +GC N
Sbjct: 377 IGIMDY-MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMI 434
Query: 403 ------GE---------------------TYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G+ TY L+ LCRDG EA +L++M +
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P V +YN+++ GLC + + +A+ EMI + P+ + + L+ +
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 184/387 (47%), Gaps = 10/387 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG L ++ V+DQ+ D+C + I G +NEA+ L + +
Sbjct: 184 TYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 243
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ ++N +++ M KE +E AA ++ + G E + S N+L+
Sbjct: 244 LARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCE--PDVISYNILLRAFLNQG 301
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D + EM +GC P++ +Y IL+ LC R++EA +L M +K D
Sbjct: 302 KWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI----EKELTPDT 357
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ ALC +G++ A+ I++ ++ G + I C +G + A + N
Sbjct: 358 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG-NANQALEIFN 416
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ G P+++SY+ M L++ G ++ M +KG P + Y + ++ L +DG
Sbjct: 417 KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG 476
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+V+EA+ ++ ++M + F PTV YNI+L GLC A+ +M ++ GC N T
Sbjct: 477 LVEEAIGLL-DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK-GCRPNETT 534
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIR 432
Y +L++G+ G EA + + R
Sbjct: 535 YILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 157/378 (41%), Gaps = 48/378 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE--AKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L + + A+K+ +E A+ P+ Y ++I + + +
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY----TYNAIIRGMCKEGMVER 270
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
E+I + CE + +R + G+ +E L + C +++ L+
Sbjct: 271 AAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 330
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + +++ A I L+ E+ S + L+ LC+ R DLA+ + M GC
Sbjct: 331 SLCRFGRIDEA-ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 389
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ LC + N+A + F ++ G ++ Y T++ AL G
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEI----FNKLRGMGCPPNVSSYNTMISALWSCGDRSR 445
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ ++ ++ KG+ + + + C C DG L+ EA+
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDG--------LVEEAI--------------- 482
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+LD+M GF P+++ Y L L K +D+A+ + E + KG
Sbjct: 483 -------------GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC- 528
Query: 364 VPTVRVYNILLKGLCDAG 381
P Y +L++G+ AG
Sbjct: 529 RPNETTYILLIEGIGFAG 546
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 158/368 (42%), Gaps = 44/368 (11%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
Q+ LL D LC+ + A V + G PD SY L+ LC + A L+
Sbjct: 99 QATQLLYD-LCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEK 157
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G + V Y +L+ LC G + ++Q+L+K++RKGL P H L
Sbjct: 158 M----EENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGL-VPNEFTHSFLLEAA 212
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF---- 327
++ A L++ + +GG P+L SY+ + L EGR E + ++ +KGF
Sbjct: 213 YKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNV 272
Query: 328 ---------------W----------------PSLVMYEAKLAALFKDGMVDEALEVIEE 356
W PSLV Y + +L G + A +V++E
Sbjct: 273 VSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDE 332
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M++ +F P+ +N ++ LC G + + V L +M C N T+ + LC
Sbjct: 333 -MMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHC-CNPNDGTFNAIAV-LCEG 389
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR A +++ + + + Y +I LC G Y A L EMI +PD +
Sbjct: 390 GRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTY 449
Query: 477 SSLVASVC 484
SSL+ +C
Sbjct: 450 SSLIRGLC 457
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 201/421 (47%), Gaps = 17/421 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + I +++++M+ + C + + +R + G LN+++ L L
Sbjct: 135 YTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLM 194
Query: 108 QFNCV--NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ V +T SF LL+ KE ++ A L L K + S N+L+ LC+
Sbjct: 195 RKGLVPNEFTHSF--LLEAAYKERGVDEAMKL-LDGIIAKGGKPNLVSYNVLLTGLCKEG 251
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R++ A+ F+++ +G P+ S +I+++ LC + R EA L+ M + +
Sbjct: 252 RTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEM----DSEERSPSL 307
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ +L G+IQ A Q+L++++R + + + I C +G+ K L +
Sbjct: 308 VTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCL-D 366
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + P+ +++A+A+ L GR+ ++ + K + Y +++L + G
Sbjct: 367 QMIHHCCNPNDGTFNAIAV-LCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKG 425
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANG 403
A +++ E M++ FVP Y+ L++GLC G + A+ + L + + + N
Sbjct: 426 NTYPAFQLLYE-MIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGN- 483
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+ L+ G C+ GR + + E M+++ Y P TY +L+ G+ ++ A L+E
Sbjct: 484 --FNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKE 541
Query: 464 M 464
+
Sbjct: 542 L 542
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 162/398 (40%), Gaps = 72/398 (18%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S L++ LC+ A+ + ++M+ GC + +Y+ L++GLC LN++ LL +
Sbjct: 134 SYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKL 193
Query: 213 FWR-------------------------------ISQKGSGEDIVIYRTLLFALCDQGKI 241
+ I KG ++V Y LL LC +G+
Sbjct: 194 MRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
++A+Q + KG + I C +G E A L+ E PSL +Y+
Sbjct: 254 EEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGR-WEEANELVAEMDSEERSPSLVTYNI 312
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK- 360
+ L + GRI +VLDEM F PS + ++ L K+G D ++ +++ +
Sbjct: 313 LIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHC 372
Query: 361 -----GTF---------------------------VPTVRVYNILLKGLCDAGNSAVAVM 388
GTF T Y ++ LC GN+ A
Sbjct: 373 CNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQ 432
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRF---LEASRVLEEMLIRSYWPCVETYNVLI 445
L +M Q G V + TY L+ GLC +G LE R+LEE Y P + +N LI
Sbjct: 433 LLYEMI-QSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEE---NDYRPILGNFNALI 488
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G C G+ ++ E MI + P+ + ++ LV +
Sbjct: 489 LGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGI 526
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
++ DA LE I+RKG K ++ ++ DLC N ++ A ++ + G IP A
Sbjct: 77 RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNK---MKKATRVMEMTIESGIIPDAA 133
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SY+ + +L G I +++++M G + V Y + + L K G ++++L+++++
Sbjct: 134 SYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKL 193
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M KG VP ++ LL+ A+ L + + G N +Y +L+ GLC++G
Sbjct: 194 MRKG-LVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAK-GGKPNLVSYNVLLTGLCKEG 251
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA + ++ + + P V + N+++R LC G+ EA + EM S+ + P + ++
Sbjct: 252 RTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYN 311
Query: 478 SLVASV 483
L+ S+
Sbjct: 312 ILIGSL 317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 2/196 (1%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G P +A + + DL ++ + +V++ G P Y + L K G +
Sbjct: 91 KGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGY 150
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A++++E+ G TV YN L++GLC GN ++ L K+ ++ G V N T+ L
Sbjct: 151 AMQLVEKMEENGCPTNTV-TYNSLVRGLCKHGNLNQSLQLLDKLMRK-GLVPNEFTHSFL 208
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++ ++ EA ++L+ ++ + P + +YNVL+ GLC G+ EA+ + ++ S+
Sbjct: 209 LEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGF 268
Query: 470 LPDISVWSSLVASVCC 485
P++ + ++ S+CC
Sbjct: 269 NPNVVSCNIILRSLCC 284
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 52 IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
I +L E R+ +I + + I + R G A L + Q
Sbjct: 383 IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGF 442
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
V ++++L++ + E L+ A +F R + + + + N L+ C+ R+DL+L
Sbjct: 443 VPDPYTYSSLIRGLCVEGMLDEALEIF-RLLEENDYRPILGNFNALILGFCKSGRTDLSL 501
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIVI 227
+F+ M +G P+ +Y IL++G+ ++ A +L ++ R + ++ + E +V+
Sbjct: 502 EIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVMRRNTVERLVM 558
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 193/421 (45%), Gaps = 11/421 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +M+ + ++ + ++ +M E + T IR G+ A+++ +
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ CV ++ LL+ K S + A L L I + N++++ +CQ R
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKL-LDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+ + + GC P+ SY+I++KGLC R +A L+ M QKG ++V
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM----GQKGCPPNVVT 174
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ LC +G ++ A+++LE+I + G P S + L + ++ A + ++
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGC-TPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ RG P + SY+ + L G + ++L +++ KG P L+ Y + L K G
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EALE++ E + KG P + Y+ + GLC A+ K+ + +G N Y
Sbjct: 294 KEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKV-QDMGIRPNTVLYN 351
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ GLC+ A + M+ P TY +LI GL G EA L+E+ S+
Sbjct: 352 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
Query: 468 A 468
A
Sbjct: 412 A 412
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 177/368 (48%), Gaps = 11/368 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++N ++ +L+AA L V+ + N L+ LC R+ AL V E
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAE----MPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M + C PD +Y IL++ C +A LL M KG DIV Y ++ +C
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKGCTPDIVTYNVVVNGIC 113
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+G++ DA++ L+ + G + P + + I L E E A+ L+ E +G P++
Sbjct: 114 QEGRVDDAIEFLKNLPSYGCE-PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 172
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+++ + L +G + +VL+++ G P+ + Y L A K +D+A+ ++
Sbjct: 173 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 232
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+ +G + P + YN LL LC +G VAV L ++ K GC +Y ++DGL +
Sbjct: 233 MVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKA 290
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G+ EA +L EM+ + P + TY+ + GLC + +A+ ++ P+ ++
Sbjct: 291 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 350
Query: 477 SSLVASVC 484
++++ +C
Sbjct: 351 NAIILGLC 358
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 41/276 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L + EV++Q+ C + + + + ++++A++ +
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C S+NTLL LC+
Sbjct: 234 VSRGCYPDIVSYNTLLT------------------------------------ALCRSGE 257
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D+A+ + ++ +GC P SY+ ++ GL + EA LL M KG DI+
Sbjct: 258 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV----SKGLQPDII 313
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+ LC + +I+DA++ K+ G++ + I L C E A L
Sbjct: 314 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE-THSAIDLFAY 372
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ G +P+ ++Y+ + L EG I E +LDE+
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 13/250 (5%)
Query: 33 EAKEKYPNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
E E+ P Y N Y ++ + ++ + +D M C + T +
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R+G+++ AV L L C S+NT++ + K K + A + L ++
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA-LELLNEMVSKGLQPD 311
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + + + LC+ R + A+ F ++ G P+ Y+ ++ GLC R TH
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE----THSAI 367
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC- 269
+F + G + Y L+ L +G I++A +L+++ + + H ID+
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAF 427
Query: 270 -----PCNDG 274
PC++
Sbjct: 428 LTTFLPCSNA 437
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 190/428 (44%), Gaps = 12/428 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L S + EV +M F I + R G++ EA+ ++K +
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--CYGWEVKSRIQSLNLLMDVLCQC 164
SF+ L+ + K++ A + +LR C+G I ++ ++ C+
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHA-MAYLREMRCFGLVPDGVIYTM--VIGGFCRA 344
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V EM GC PD +Y+ L+ GLC +RRL +A LL M ++G D
Sbjct: 345 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM----RERGVPPD 400
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ + TL+ C +GK+ A+Q+ + +L + L+ + + C G D++ A L
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG-DLDKANDLW 459
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ R P+ +YS + +G++ + LDEM KG P+++ Y + + +
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V + + +++ MV P + YN L+ G A L M K+ +
Sbjct: 520 GNVSKGQKFLQKMMVN-KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVV 577
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY +L++G G EA + E+M + P TY +I G + G EA +EM
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637
Query: 465 ISQAKLPD 472
+ + PD
Sbjct: 638 LQRGFAPD 645
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 184/395 (46%), Gaps = 10/395 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ Y +A + ++ ++ + + + N ++ + EAA L + S
Sbjct: 163 VHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL-VDSMVSKG 221
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K I + N ++ LC+ D A VF+EMD G PD S+ IL+ G C + EA
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ M +G D+V + L+ +GK+ AM L ++ GL P + +
Sbjct: 282 KIYKEM----RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL-VPDGVIYTM 336
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + A + +E + G +P + +Y+ + L E R+++ + +L+EMR +G
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +G +D+AL++ + M+ P + YN L+ G+C G+ A
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDT-MLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 387 VMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
M S+++ N TY IL+D C G+ +A L+EM+ + P + TYN +I
Sbjct: 456 NDLWDDMHSREI--FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G C G + +L++M+ PD+ +++L+
Sbjct: 514 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 204/471 (43%), Gaps = 44/471 (9%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E++ + G S + VF IRTY ++ + EA F+ + + N LL
Sbjct: 71 REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + A + R + + +LN+++ C+ D V EM+ + +P
Sbjct: 131 LSRAGWPHLAADAY-RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP 189
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D ++++++ A L+ SM KG IV Y ++L LC G A
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMV----SKGLKPGIVTYNSVLKGLCRSGMWDKA 245
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ +++ G+ AP R I + C GE IE A + E RG P L S+S +
Sbjct: 246 WEVFKEMDDFGV-APDVRSFTILIGGFCRVGE-IEEALKIYKEMRHRGIKPDLVSFSCLI 303
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G++ L EMR G P V+Y + + G++ +AL V +EMV
Sbjct: 304 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV-RDEMVGCGC 362
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-------------VGCVANGE------ 404
+P V YN LL GLC A L +M ++ G G+
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422
Query: 405 ---------------TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
TY L+DG+CR G +A+ + ++M R +P TY++LI C
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
G+ +A +L+EMI++ LP+I ++S++ C + +++ +K L+++
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY-CRSGNVSKGQKFLQKM 532
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 177/389 (45%), Gaps = 8/389 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG A++L ++ ++N++LK + + + A +F + + V +
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF-KEMDDFGVAPDV 261
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S +L+ C+ + AL +++EM +G PD S+ L+ +++ A L
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G D VIY ++ C G + DA+++ ++++ G P + L
Sbjct: 322 M----RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC-LPDVVTYNTLLNGL 376
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ A+ L+NE RG P L +++ + EG++ + ++ D M + P +
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + + + G +D+A ++ ++ + F P Y+IL+ C+ G A +L
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLD 495
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G + N TY ++ G CR G + + L++M++ P + TYN LI G
Sbjct: 496 EMINK-GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 554
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
K ++A L M + PD+ ++ L+
Sbjct: 555 DKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 139/350 (39%), Gaps = 42/350 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G +Y +IG + +++ V D+M G C C V
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVG--CGCLPDVV-------------------- 367
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++NTLL + KE +L A L L V + + L+ C
Sbjct: 368 -------------TYNTLLNGLCKERRLLDAEGL-LNEMRERGVPPDLCTFTTLIHGYCI 413
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D AL +F M Q PD +Y+ L+ G+C L++A L M R
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH-- 471
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
V Y L+ + C++G+++DA L++++ KG+ + I C G +G K
Sbjct: 472 --VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK-F 528
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + ++ P L +Y+ + E ++ + K+L+ M + P +V Y +
Sbjct: 529 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 588
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
G V EA + E+ KG P Y ++ G AGNS A +M
Sbjct: 589 HGNVQEAGWIFEKMCAKG-IEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 203/471 (43%), Gaps = 55/471 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + + E + + +MK C + + I Y + G L E L + +
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ K ++E A+ F V + + + + +D C+ A
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYF-GEMKRQGVVANVVTFSTFVDAFCKEGLVQEA 324
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F +M +G P+ +Y L+ G C RL++A LL M +G ++V Y
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV----HQGLVPNVVTYTV 380
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPK------SRRHRIDLCPCNDGEDIEGAKSLI 284
++ LC +GK+ +A +L + R G+KA + H ++ + E A L+
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMN-------NNSERALDLL 433
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
N+ +G ++ Y + L + ++ E +L +M G P+ V+Y + ALFK
Sbjct: 434 NQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G EA+ ++ + + G F P V Y L+ GLC AG+ + A+ + KM +++G N +
Sbjct: 494 GKESEAVALLHKILDSG-FQPNVVTYCALIDGLCKAGSISEAISHFNKM-RELGLDPNVQ 551
Query: 405 TYGILVDGLCRDGRFLEASRVLEEM--------------LIRSYW-------------PC 437
Y L+DG C+ G +A ++ EM LI Y
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611
Query: 438 VET--------YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+E+ Y I G C++ EA L EMI PD +V++ L+
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 203/465 (43%), Gaps = 33/465 (7%)
Query: 43 HNGPVYASMIGILSESN-----RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL- 96
H + AS++ +L + R + + V+D + S + A+R AR QL
Sbjct: 107 HRPHLAASLVDLLHRAALALGPRRSALPSVVDTLL--SLLADHGLLDDAVRALARVRQLR 164
Query: 97 -----------------NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
N L + L V +FN ++ + KE +L A LF+
Sbjct: 165 VPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFV 224
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
R + + N L+D +C + + EM GC D +Y+ L+
Sbjct: 225 R-MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF 283
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R+ +A YS F + ++G ++V + T + A C +G +Q+AM++ ++ +G+
Sbjct: 284 GRMEKA----YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A L++E + +G +P++ +Y+ M L EG++ E D VL
Sbjct: 340 EFTYTSLVDGTCKAGR-LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL 398
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
M G + ++Y + F + + AL+++ + KG + V +Y L+ GLC
Sbjct: 399 SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMEL-DVSLYGTLIWGLCK 457
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A L KM+ G N Y ++D L + G+ EA +L ++L + P V
Sbjct: 458 DQKVDEAKSLLHKMAG-CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVV 516
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY LI GLC G EA+ +M P++ +++L+ C
Sbjct: 517 TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 173/424 (40%), Gaps = 45/424 (10%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +++ + + + E ++ QM+ + + + + +AG+L++A+ L
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 363
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ V ++ ++ + KE K+ EA ++L L G VK+ L+
Sbjct: 364 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG--VKANELLYTTLIHGHF 421
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
S+ AL + +M +G D Y L+ GLC D++++EA LL+ M + G
Sbjct: 422 MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM----AGCGLR 477
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ VIY T++ AL GK +A+ +L KIL G +
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ------------------------- 512
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
P++ +Y A+ L G I E ++MR G P++ Y A +
Sbjct: 513 -----------PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G +++A+ ++ E + KG + V VY L+ G N A KM + G +
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKV-VYTSLIDGYMKQANLQDAFALKTKMIES-GLQLD 619
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y + G C EA VL EM+ P YN LIR +G EA
Sbjct: 620 LYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQN 679
Query: 463 EMIS 466
EM S
Sbjct: 680 EMES 683
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 221/475 (46%), Gaps = 10/475 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + + + AL++F K ++ + +Y +I L ++ +
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFD--KMTRSGFQGDILLYGYLINALRKTRQARRAV 64
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ +M + C + I + + G + + +F+ + +++L+ +
Sbjct: 65 ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL A LF +K+ + + N L+ C+ A F +M +G PD
Sbjct: 125 CRVGKLREAVNLF-DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++ L+ L ++ EA Y +F + ++G +IV Y +LL LC ++ A+
Sbjct: 184 VVTFTTLIDHLSKKGKVQEA----YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ E ++ +G+K + + C G+ E A +L + PS+ +Y+ +
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKT-EEAMTLFRKMQYEELTPSITTYTILLKA 298
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
LY GRI ++ + M+ G PSL Y L L K+G ++EA++V + + P
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS-LKSIKYKP 357
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
++R+Y+IL+ G+ A A+ ++ VG V N TY I+++GLC++G+ LEA R+
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEIPT-VGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+M ++N +IRG + +A+ +L+ M + P+ SV LV
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 184/405 (45%), Gaps = 47/405 (11%)
Query: 117 SFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+ +TL+K M E K+ A LF RS + + I L++ L + R++ A+ +
Sbjct: 11 TVSTLVKGMCFEGKVMDALELFDKMTRSGF----QGDILLYGYLINALRKTRQARRAVEL 66
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+ M + C + +Y +++ LC D + MF + G ++++Y +L+
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKG----LKMFREMINMGICPNVIVYSSLIN 122
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC GK+++A+ + ++++ +G+KA + + C G E ++ ++ + G +
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTF-SQMVGEGIL 181
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + +++ + L +G++ E K+ + M +G P++V Y + L L +D A+ +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-------------VGCV 400
E + +G + + YN L+ G C +G + A+ +KM +
Sbjct: 242 FEVMVERGIKIDVIS-YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300
Query: 401 ANG---------------------ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
NG +TY +L+DGLC++G EA V + Y P +
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y++LI G+ + A+ +E+ + +P+I ++ ++ +C
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 184/417 (44%), Gaps = 8/417 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ N ++++ + ++ + E+ D+M + ++ I + Q AV
Sbjct: 5 YQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAV 64
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + C ++ ++ + K+ L + R + + + L++
Sbjct: 65 ELHRRMLSEICSGNFFTYGLVIDSLCKDG-LAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + A+++F EM QG + +Y+ L+ C EAT F ++ +G
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATR----TFSQMVGEG 179
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V + TL+ L +GK+Q+A +I E ++++G +AP + L ++ A
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG-EAPNIVTYNSLLNGLCLHHQMDHA 238
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L + RG + SY+ + G+ E + +M+ + PS+ Y L A
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L+++G + A E+ + G P++ Y +LL GLC G A+ + + K +
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQ-SPSLDTYTVLLDGLCKNGCIEEAIDVFRSL-KSIKYK 356
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ Y IL+ G+ + R+ A + +E+ P + TYN++I GLC GK EA
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 7/306 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G P+ + L+KG+C + ++ +A L F ++++ G DI++Y L+ AL +
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALEL----FDKMTRSGFQGDILLYGYLINALRKTRQ 59
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+++ ++L + + C DG I+G K + E + G P++ YS
Sbjct: 60 ARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLK-MFREMINMGICPNVIVYS 118
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L G++ E + DEM ++G +++ Y + + A + G+ EA + MV
Sbjct: 119 SLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ-MVG 177
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+P V + L+ L G A + M KQ G N TY L++GLC +
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQ-GEAPNIVTYNSLLNGLCLHHQMD 236
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
A R+ E M+ R V +YN LI G C+ GK EA+ +M + P I+ ++ L+
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296
Query: 481 ASVCCN 486
++ N
Sbjct: 297 KALYQN 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 34/160 (21%)
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-------------------- 398
+K + P + + L+KG+C G A+ KM++
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 399 --------------CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
C N TYG+++D LC+DG ++ ++ EM+ P V Y+ L
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I GLC +GK EAV +EM+SQ ++ ++SL+ + C
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC 160
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 34/434 (7%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + G L EA +F+ + + V S N L + K+ A I+ R
Sbjct: 620 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + S N+++ +CQ R A H+ M+ +G PD SY ++ G C
Sbjct: 680 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 739
Query: 202 LNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYRT 230
L++ L+ M F + ++G D V+Y T
Sbjct: 740 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C +G I+ A + ++ + + I C G+ +E K L +E +
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMFCK 858
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +++ + G + + +V + M G P++V Y + L K+G +D A
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E++ EM K P + YN ++ GLC +GN AV + + + G A+ TY L+
Sbjct: 919 NELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLM 976
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D C+ G +A +L+EML + P + T+NVL+ G C G + L M+++
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1036
Query: 471 PDISVWSSLVASVC 484
P+ + ++SLV C
Sbjct: 1037 PNATTFNSLVKQYC 1050
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 193/426 (45%), Gaps = 17/426 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSL--FKNLSQFNCVNW---TQSFNTLLKEMVKESKLEAAHI 136
V + I ++ +LN S F +L + +W + F+ + +V L A
Sbjct: 580 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 639
Query: 137 LFLRSC-YGWEVKSRIQSLNLLMDVLCQ-CRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F + YG + + S N+ + L + C ++ A+ VF+E G + SY+I++
Sbjct: 640 VFEKMLNYGLVLS--VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 697
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+C R+ EA HLL M KG D++ Y T++ C G++ +++E + RK
Sbjct: 698 FVCQLGRIKEAHHLLLLM----ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
GLK I C + E A+ +E + +G +P Y+ + G I
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K EM ++ P ++ Y A ++ + G + EA ++ E KG P + L+
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELI 871
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C AG+ A M Q GC N TY L+DGLC++G A+ +L EM
Sbjct: 872 NGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P + TYN ++ GLC G EAV + E + D +++L+ + C + +++ +
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY-CKSGEMDKAQ 989
Query: 495 KTLEQL 500
+ L+++
Sbjct: 990 EILKEM 995
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 182/418 (43%), Gaps = 10/418 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++++ + ++ ++I+ MK + ++ + I R +L EA F +
Sbjct: 727 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + T + TL+ K + AA F + ++ + + ++ CQ
Sbjct: 787 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDM 845
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F EM +G PD ++ L+ G C + +A + M Q G ++V
Sbjct: 846 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI----QAGCSPNVVT 901
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ LC +G + A ++L ++ + GL+ + I C G +IE A L+ E
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG-NIEEAVKLVGEF 960
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G +Y+ + G + + ++L EM KG P++V + + GM+
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETY 406
++ +++ + KG P +N L+K C N A K M S+ VG +G+TY
Sbjct: 1021 EDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG--PDGKTY 1077
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
LV G C+ EA + +EM + + V TY+VLI+G K EA ++M
Sbjct: 1078 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 201/472 (42%), Gaps = 18/472 (3%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
YL+++ K TA+ +F+E E + N Y +I + + RI E ++ M+
Sbjct: 659 YLTRLSKDCYKTATAIIVFREFPEVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLME 716
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
++T + Y R G+L++ L + + + + + +++ + + KL
Sbjct: 717 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 776
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--CRRSDL--ALHVFQEMDFQGCYPDRES 188
A + ++ I ++ L C+R D+ A F EM + PD +
Sbjct: 777 EAE-----EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 831
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y ++ G C + EA L + MF KG D V + L+ C G ++DA ++
Sbjct: 832 YTAIISGFCQIGDMVEAGKLFHEMFC----KGLEPDSVTFTELINGYCKAGHMKDAFRVH 887
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ G + C +G D++ A L++E G P++ +Y+++ L
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 946
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G I E K++ E G V Y + A K G +D+A E+++E + KG PT+
Sbjct: 947 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIV 1005
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+N+L+ G C G L M + G N T+ LV C A+ + ++
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M R P +TY L++G C EA +EM + +S +S L+
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 45/352 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + E ++ +M E F I Y +AG + +A + ++
Sbjct: 831 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ TL+ + KE L++A+ L L + ++ I + N +++ LC+
Sbjct: 891 IQAGCSPNVVTYTTLIDGLCKEGDLDSANEL-LHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ + E + G D +Y LM C +++A +L M KG IV
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML----GKGLQPTIV 1005
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR-----------RHRI--------D 267
+ L+ C G ++D ++L +L KG+ AP + R+ + D
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-APNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 268 LCPCNDGED----------------IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+C G D ++ A L E +G S+++YS + +
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Query: 312 IVEGDKVLDEMRTKGFWPSLVMY----EAKLAALFKDGMVDEALEVIEEEMV 359
+E +V D+MR +G ++ + K D +VD E+IE +V
Sbjct: 1125 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 83/507 (16%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ-------LNEAV 100
Y ++I L+ +++ E + + M + CE F T I + +AGQ LN+A+
Sbjct: 10 YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQAL 69
Query: 101 SLFK-------------------NLSQFNCVNWTQ-----SFNTLLKEMVKESKLEAAHI 136
F+ + F V S+ T++K + +++ A
Sbjct: 70 KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACE 129
Query: 137 LFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
LF E+K+ S N+ ++D L + R + L F+EM C P R +Y +
Sbjct: 130 LF------EELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ GLC + L +A + F ++ QKG D + Y TL+ K+ +A ++L+ +
Sbjct: 184 VIDGLCKAQMLPDACKV----FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L KG + I C + I AK +I + RG P L ++++ ++GR
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKL-DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
E +VL EM +G P +++Y + + LF G V EA V + + KG P Y
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC-APDALTYG 357
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQ-VG--CVA--------------------------- 401
+++ GN A L+ M+K VG C A
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417
Query: 402 ----NGETYGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVETYNVLIRGLCSIGKQYE 456
N T+ +L+ GL +DG+ A + +EML + P + +Y +LI GL G+ E
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSE 477
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASV 483
A + +EMI + +P+ ++SL+ S+
Sbjct: 478 AFLQFQEMIDRGIIPECHTYTSLIYSL 504
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 200/434 (46%), Gaps = 11/434 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ RI + + ++M G SC + + I +A L +A +F+ +
Sbjct: 146 YTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMV 205
Query: 108 QFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q CV T ++ TL+ K SK+ EA +L + G E + + ++ C+
Sbjct: 206 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA--VTYGSIVHGFCKLDM 263
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A V +M +GC P + L+ + R EA Y + ++ +G D++
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA----YQVLTEMTARGCAPDVI 319
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y +L+ L G++ +A + + ++ KG AP + + + + ++E A ++ E
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGC-APDALTYGTIIQNFSKIGNVEAAGEIL-E 377
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + G+ P +Y+++ R+ + V D M G P+ V + + LFKDG
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D A + +E + K PT+ Y IL+ GL AG + A + ++M + G + T
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR-GIIPECHT 496
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+ L + GR EA +++E+M+ P V+ Y+ LI GL A +EM+
Sbjct: 497 YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556
Query: 466 SQAKLPDISVWSSL 479
+ P+ + L
Sbjct: 557 KRGCAPNEVTYKVL 570
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 193/438 (44%), Gaps = 11/438 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L++S RI E E+ +++K C + I +AG++ + + F+ +S
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+CV ++ ++ + K L A +F + V I + L+D + +
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI-TYTTLIDGFSKASKM 229
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + M +G P +Y ++ G C +NEA ++ M R + G + I
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG----LFI 285
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--IDLCPCNDGEDIEGAKSLIN 285
+ +LL +G+ ++A Q+L ++ +G AP + IDL + A+ + +
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGC-APDVILYTSLIDLLFSTG--RVPEARHVFD 342
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + + G + ++L+ M G P Y + + K
Sbjct: 343 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD+A V + MV P +N+L+ GL G + A K+M ++ +
Sbjct: 403 RVDQAFGVYDR-MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y IL+DGL + GR EA +EM+ R P TY LI L G+ EA +E+M+
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521
Query: 466 SQAKLPDISVWSSLVASV 483
PD+ +S+L+ +
Sbjct: 522 KLGVNPDVQAYSALITGL 539
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 46/331 (13%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I S N ++ L + D A F M GC PD ++ L+ G C + LL
Sbjct: 7 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
R D+ +Y +++ C G L G + + +D+
Sbjct: 67 QALKRFRP-----DVFLYTSVIHGYCKAGD-----------LDTGYFRAVTPKASLDVI- 109
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
SY+ + L + RI E ++ +E++T G P+
Sbjct: 110 ---------------------------SYTTVIKGLADSKRIDEACELFEELKTAGCSPN 142
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y A + L K G +++ L+ EEM + VPT Y +++ GLC A A
Sbjct: 143 VVAYTAVIDGLLKAGRIEDGLKNF-EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 201
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++M Q GCV + TY L+DG + + EA ++L+ ML + P TY ++ G C
Sbjct: 202 EQMV-QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 260
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ EA + +M + P + +++SL++
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 18/343 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ + + I E KEVI QM+ CE +F + + Y G+ EA + +
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHI---LFLRSCY--GWEVKSRIQSLNLLMDV 160
+ C + +L+ + ++ EA H+ + + C + IQ+ + + +V
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ A + + M G PD +Y+ LM G R+++A + ++ R+ G
Sbjct: 370 -------EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA----FGVYDRMVASG 418
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ V + L+ L GK A + +++L K P + I + + A
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
E + RG IP +Y+++ L GRI E K++++M G P + Y A +
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
L MVD A +V +E M +G P Y +L +G AG +
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGC-APNEVTYKVLRRGFRAAGRA 580
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 50/306 (16%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P SY+ ++ GL + +++EA Y F + G D++ + TL+ C G+
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEA----YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ 57
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
Q+ K+L + LK R R D+ + ++I G
Sbjct: 58 ----PQVGHKLLNQALK-----RFRPDV--------------FLYTSVIHG--------Y 86
Query: 301 AMAIDLYNEG--RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
A DL + G R V LD ++ Y + L +DEA E+ EE
Sbjct: 87 CKAGDL-DTGYFRAVTPKASLD----------VISYTTVIKGLADSKRIDEACELFEELK 135
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
G P V Y ++ GL AG + ++MS CV TY +++DGLC+
Sbjct: 136 TAGC-SPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS-SCVPTRTTYTVVIDGLCKAQM 193
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A +V E+M+ + P TY LI G K EA L+ M+++ P + S
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253
Query: 479 LVASVC 484
+V C
Sbjct: 254 IVHGFC 259
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 171/344 (49%), Gaps = 10/344 (2%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHV-FQEMDFQGCYPDRESYHILMKGLCNDRRL 202
GW ++ + + L+ LC +R+ A+ + + M GC P+ SY+IL+KGLC++ R
Sbjct: 126 GWTAQA--ITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRS 183
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+A HLL++M ++ G D+V Y T++ L +G++ A + +++L +G+ +P
Sbjct: 184 QQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGM-SPNCI 242
Query: 263 RHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ L C+ G+ E I + R G+ P + +Y+ + + L GR +E KV D
Sbjct: 243 TYNCLLHGYCSSGKPKEAIG--IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFD 300
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M KG P +Y L +G + + +++ + MV+ P ++NIL+
Sbjct: 301 SMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL-DVMVRNGTQPDHYIFNILIGAYAKH 359
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A++ KM +Q G N TYG ++D LCR G+ +A + ++ P
Sbjct: 360 GMVDEAMLAFSKMRQQ-GLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ LI GLC+ K +A EMI + P+ +++L+ +C
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 193/475 (40%), Gaps = 85/475 (17%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ---SFNTLLKEMVKESKLEAAHILF 138
++ I +RAG L+ A F L + WT +F+ LLK + + + A +
Sbjct: 98 TYSIVIGCCSRAGHLDLA---FAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM----DFQGCYPDRESYHILMK 194
LR S N+L+ LC RS ALH+ M GC PD SY ++
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GL + +L++A Y +F + +G + + Y LL C GK ++A+ I K+ R
Sbjct: 215 GLLREGQLDKA----YCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRD 270
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G++ + + + C +G +E A+ + + + +G P + Y + EG +V+
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSME-ARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQ 329
Query: 315 GDKVLD-----------------------------------EMRTKGFWPSLVMYEAKLA 339
++LD +MR +G P++V Y +
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389
Query: 340 ALFKDGMVDEAL----------------------------------EVIEEEMVKGTFVP 365
AL + G VD+A+ E + EM+ P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+N LL LC G A M + V + TY L+DG C DG+ EA+++
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVR-VDVQCDVITYTTLIDGYCLDGKVDEATKL 508
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LE M++ P TYN +I G C G+ +A +M S+ P I ++S+++
Sbjct: 509 LEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 201/509 (39%), Gaps = 86/509 (16%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCE--CKDSV--FATAIRTYARAGQLNEA 99
N Y ++ L + NR + ++ M D C V + T I R GQL++A
Sbjct: 166 NAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKA 225
Query: 100 VSLFKNL----SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
LF + NC+ ++N LL K + A +F + C V+ + + N
Sbjct: 226 YCLFDEMLDQGMSPNCI----TYNCLLHGYCSSGKPKEAIGIFRKMCRDG-VEPDVVTYN 280
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND--------------RR 201
LM LC+ RS A VF M +G PD Y L+ G + R
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN 340
Query: 202 LNEATHLLYSM-----------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ H ++++ F ++ Q+G +IV Y T++ ALC GK+ DA
Sbjct: 341 GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDA 400
Query: 245 MQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
M ++++ +GL P R LC C+ + A+ L E + RG P+ ++
Sbjct: 401 MSQFDRLISEGL-TPNGVVFRTLIHGLCACDKWDK---AEELAVEMIGRGICPNTIFFNT 456
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L EG + + D M ++ Y + DG VDEA +++E ++ G
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ--------VGCVANG---------- 403
P YN ++ G C G A ++M+ + + +G
Sbjct: 517 V-KPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575
Query: 404 ----------------ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
TY I++ GLC++ +A R+ + + + T+N++I
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVW 476
L G+ EA ++++ +P++ +
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTY 664
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G+ + + L L D +A+++ M P YNILLKGLCD S
Sbjct: 126 GWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQ 185
Query: 386 AVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ L M + GC + +Y +++GL R+G+ +A + +EML + P TYN
Sbjct: 186 ALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYN 245
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
L+ G CS GK EA+ +M PD+ +++L+ +C N + RK + +
Sbjct: 246 CLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEA-RKVFDSM 302
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 204/472 (43%), Gaps = 16/472 (3%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
Y S K +P + L PN + V + L + E +++ M
Sbjct: 27 YPSLPTTKPLTPNSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMS 86
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
G A I+ +G+ EA + C ++N ++ +L+
Sbjct: 87 GLEPSAAPGPCAALIKKLCASGRTAEARRVLAA-----CEPDVMAYNAMVAGYCVTGQLD 141
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
AA R ++ + N L+ LC R+ AL V +M +GC PD +Y IL
Sbjct: 142 AAR----RLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTIL 197
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++ C +A LL M KG DI+ Y ++ +C +G++ DA++ L+ +
Sbjct: 198 LEATCKRSGYKQAMKLLDEM----RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLP 253
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G + P + + I L E E A+ L+ E +G P++ +++ + L G +
Sbjct: 254 SHGCE-PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLV 312
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+VLD++ G P+ + Y L A K +D A+ +E + +G + P + YN
Sbjct: 313 EPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCY-PDIVSYNT 371
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
LL LC G AV L ++ K GC +Y ++DGL + G+ EA +L EM+ +
Sbjct: 372 LLTALCRGGEVDAAVELLHQL-KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK 430
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TY+ + GLC + EA+ ++ P+ ++++++ +C
Sbjct: 431 GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC 482
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 178/387 (45%), Gaps = 8/387 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T IR G+ A+ + ++ + CV ++ LL+ K S + A L L
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL-LDE 216
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N++++ +CQ R D A+ + + GC P+ SY+I++KGLC R
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A L+ M SQKG ++V + L+ LC +G ++ AM++L++I + G P S
Sbjct: 277 WEDAEKLMAEM----SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGC-TPNS 331
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ L + ++ A + + + RG P + SY+ + L G + ++L +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
++ KG P L+ Y + L K G EALE++ E + KG P + Y+ + GLC
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG-LQPDIITYSTISSGLCRED 450
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ K+ + +G N Y ++ GLC+ A + M+ P TY
Sbjct: 451 RIEEAIRAFCKV-QDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQA 468
+LI GL G EA L E+ S+
Sbjct: 510 TILIEGLTYEGLVKEARELLGELCSRG 536
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A K+ E +K Y N + +I L + EV+DQ+ C +
Sbjct: 280 AEKLMAEMSQK--GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HILFLRSC 142
+ + + +++ A++ + + C S+NTLL + + +++AA H L + C
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ S N ++D L + ++ AL + EM +G PD +Y + GLC + R+
Sbjct: 398 -----TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
EA F ++ G + V+Y +L LC + + +A+ + ++ G
Sbjct: 453 EEAIR----AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 6/176 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + E++ Q+K C + T I +AG+ EA+ L +
Sbjct: 369 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL--NLLMDVLCQCR 165
+++T+ + +E ++E A F C ++ R ++ N ++ LC+ R
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAF---CKVQDMGIRPNTVLYNAILLGLCKRR 485
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKG 220
+ A+ +F M GC P+ +Y IL++GL + + EA LL + R + KG
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKG 541
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 23/378 (6%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T ++N L+ + + L AA LF++ W S +L+ LC R D A VF
Sbjct: 125 TFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVF 184
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M C P +Y +L+ GLC RR+ EA LL M KG ++V Y L+
Sbjct: 185 AKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV----NKGVVPNVVTYNALIGG 240
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINE 286
LC +G+ D ++LEK+ + +RH D C G+ GAK +++E
Sbjct: 241 LCQEGRFDDVTKLLEKM--------EIQRHSPDCWTYTQVVHGLCKHGKVGHGAK-VLHE 291
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A+ +G + +Y+A+ G + VL M+ P + + + G
Sbjct: 292 AIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGK 351
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V +A+ + +M P +N L+ G C G +A+ L M ++ G + + +TY
Sbjct: 352 VHKAMAFL-TQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLM-EEYGVLPDRQTY 409
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I +D LC +G+ EA + + ++ Y L+ G C +G A +E+M S
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469
Query: 467 QAKLPDISVWSSLVASVC 484
+ +PD+ +++L+ +C
Sbjct: 470 ENCMPDVHTYNTLIDGLC 487
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 36/418 (8%)
Query: 92 RAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
RAG L A LF + + + S+ L+K + +++ A +F + GW +
Sbjct: 137 RAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGW-CRPG 195
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + +L+D LC+ RR A + EM +G P+ +Y+ L+ GLC + R ++ T LL
Sbjct: 196 VHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255
Query: 211 SM--------FWRISQ-----------------------KGSGEDIVIYRTLLFALCDQG 239
M W +Q KG +++ Y L+ C G
Sbjct: 256 KMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A+ +L+ + R + + + C G+ + A + + + G P+ ++
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGK-VHKAMAFLTQMAGAGLSPNTVTF 374
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+++ + G ++LD M G P Y + AL +G ++EA + +
Sbjct: 375 NSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPM 434
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG V +Y L+ G C G+ A ++KM+ + C+ + TY L+DGLC+ R
Sbjct: 435 KGIKAHNV-IYTSLVHGYCQVGDIDSAFGLMEKMASE-NCMPDVHTYNTLIDGLCKVKRL 492
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
A +L++M + P T+N+LI+ + K +A E+MIS PD ++
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 205/488 (42%), Gaps = 36/488 (7%)
Query: 36 EKYPNYRHNGP--VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
EK RH+ Y ++ L + ++ +V+ + G + + I Y +
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKG 314
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G + A+ + + + + Q+FN ++ K+ A + FL G + +
Sbjct: 315 GDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA-MAFLTQMAGAGLSPNTVT 373
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+ C +AL + M+ G PDR++Y I + LC++ +L EA +S+F
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA----HSLF 429
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRID-LCPC 271
+ KG VIY +L+ C G I A ++EK+ + + + ID LC
Sbjct: 430 SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKV 489
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ ++ A L+++ +G P+ +++ + + + + + K+ ++M + G P
Sbjct: 490 ---KRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDK 546
Query: 332 VMYEAKLAA-LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
Y K++ F+ +E +++ EM + P V YN ++K DAG A
Sbjct: 547 QTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAH 606
Query: 391 KKMSKQVGCVANGETYGILVDGLCR----------------DGRFLEASRVLEEMLIRSY 434
KM V + TY IL++ +C D R L+ + E+M
Sbjct: 607 VKM-LSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQ--ELFEQMCESDA 663
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P + TY L+RGLC+ + E L +M + L D + L+ C +L + R
Sbjct: 664 APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYC----NLEMYR 719
Query: 495 KTLEQLSS 502
+ EQ S
Sbjct: 720 EACEQFRS 727
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 185/470 (39%), Gaps = 72/470 (15%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I+ AG++++A +F +S+ C ++ LL + K ++ A L L
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEAL-LGEM 222
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V + + N L+ LCQ R D + ++M+ Q PD +Y ++ GLC ++
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Query: 203 NEATHLLYSMFWR------------ISQKGSGED-------------------IVIYRTL 231
+L+ + I+ G D + + +
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ C GK+ AM L ++ GL + + C+ GE + A L++ G
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER-KIALRLLDLMEEYG 401
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
+P +Y+ L +EG++ E + + KG V+Y + + + G +D A
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++E+ M +P V YN L+ GLC A+ L KM KQ G T+ IL+
Sbjct: 462 GLMEK-MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ-GIEPTTCTFNILIK 519
Query: 412 GLCRDGRFLEASRVLEEML--------------IRSYW---------------------- 435
+ D + +A+++ E+M+ I + W
Sbjct: 520 QMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGV 579
Query: 436 -PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P VETYN +I+ G + +A +M+S PD + +S L+ +C
Sbjct: 580 FPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC 629
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
MR G P Y + L + G++ A + + + Y IL+KGLC AG
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A KMS+ C TY +L+DGLC+ R EA +L EM+ + P V TY
Sbjct: 176 RIDDACRVFAKMSRGW-CRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N LI GLC G+ + LE+M Q PD ++ +V +C
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLC 277
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P +Y+ + + L G + + +M R G Y + L G +D+
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDD 179
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A V + M +G P V Y +LL GLC A L +M + G V N TY L
Sbjct: 180 ACRVFAK-MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK-GVVPNVVTYNAL 237
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLC++GRF + +++LE+M I+ + P TY ++ GLC GK L E I +
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297
Query: 470 LPDISVWSSLVASVC 484
++ +++L+ C
Sbjct: 298 ALEVLTYNALINGYC 312
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 173/422 (40%), Gaps = 36/422 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
YA I L + ++ E + + + + ++ + + Y + G ++ A L + +
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ NC+ ++NTL+ + K +L+ A I L ++ + N+L+ + ++
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRA-IDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILM-----KGLCNDRRLNEATHLLYSMFWRISQKGS 221
A ++++M GC PD+++Y + + +G + ++ A + + G
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAV-------VEMHEAGV 579
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCNDGE--- 275
D+ Y ++ A D G + A K+L + P + I L C +D +
Sbjct: 580 FPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPID-PDCTTYSILLNYMCNKDDSDAFD 638
Query: 276 --------DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
D+ + L + P +++Y A+ L N+ R+ E + +L +M+
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
M + L M EA E M +F P ++ +LL GLCD+G+ +AV
Sbjct: 699 LLDEDMSDYLLGCYCNLEMYREACEQF-RSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAV 757
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV---ETYNVL 444
M +G + + +L+D L G A LE + + CV TY L
Sbjct: 758 SIFSDMLG-LGYNYDEVVWKLLIDCLHEKG---HAGACLEMLSVMDAKKCVASTRTYASL 813
Query: 445 IR 446
+R
Sbjct: 814 VR 815
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 220/497 (44%), Gaps = 74/497 (14%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV-SLFKNLSQFNCVN 113
L+ + + ++ + +M+ C + A+ +ARAG + A+ + ++ + C
Sbjct: 71 LAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 130
Query: 114 WTQS--FNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRIQSLNLLMDVLCQCRRSD 168
T +N L+ +++E+ + A ++ C V+ + + NLL+ LCQ R
Sbjct: 131 PTAPRLYNHLIDALLRENMVGAVALV----CGNMRKDGVQPNVFTYNLLVRALCQNHRVG 186
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------------- 209
A + EM +GC PD +Y ++ LC R++EAT +L
Sbjct: 187 AARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCR 246
Query: 210 -------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP--- 259
+++ + +G +++ Y T++ A C G+++ A IL +++ G
Sbjct: 247 EFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVAT 306
Query: 260 ----------KSRRH-RIDLCPCNDGE--------------------DIEGAKSLINEAL 288
R H +D+ C E D++GA S++N+
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P+ +YS + ID +++ ++G + ++M G P++V+Y + K M
Sbjct: 367 QHGCFPNARTYSTL-IDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMF 425
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++A +I++ +V+ P +N L++ LC+ A+ +M + GC NG TY
Sbjct: 426 NQAESLIDKMLVENC-PPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRH-GCPPNGRTYN 483
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ GL R+G +A +++ EM + TYN ++ GLC + EA+ ++ MI +
Sbjct: 484 ELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVR 543
Query: 468 AKLPDISVWSSLVASVC 484
PD +++++ + C
Sbjct: 544 GIQPDAFTFTAIIHAYC 560
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 207/484 (42%), Gaps = 55/484 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L +++R+ ++++D+M C D + T + G+++EA +
Sbjct: 172 YNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP 231
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
S+N ++ + +E +++ + + G ++ + + +++ C+
Sbjct: 232 PV-----AASYNAVILALCREFRMQEVFAV-VGDMVGRGLQPNVITYTTIVNAFCKAGEL 285
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIV 226
+A + M GC P+ ++ L+ GL ND R+++A + W+ + +G V
Sbjct: 286 RMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM-----WKCMVAEGWAPSTV 340
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA------ 280
Y L+ LC G ++ A +L + + G P +R + + + D++GA
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGC-FPNARTYSTLIDGFSKAGDLDGAISIWND 399
Query: 281 -----------------------------KSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+SLI++ L+ P+ +++ + L N R
Sbjct: 400 MTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRR 459
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ V EMR G P+ Y L LF++G +AL+++ E G + V YN
Sbjct: 460 VGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLV-TYN 518
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++ GLC A+ ++ +M + G + T+ ++ C++G A+ +L M +
Sbjct: 519 TVVSGLCQMRMGREAMFFVGRMIVR-GIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNV 577
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV-----CCN 486
+ + Y +L+ LC+ K +A+++L +M+ + P+ W+ LV V C N
Sbjct: 578 VNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCNN 637
Query: 487 TADL 490
+D
Sbjct: 638 PSDF 641
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 214/470 (45%), Gaps = 14/470 (2%)
Query: 9 LTPTYLSQIIKK---QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
L+P ++S ++K QK P ALK F A K Y HN Y S I +L+ + + +K
Sbjct: 59 LSPNFVSFVLKSMELQKRPDLALKFFTWAG-KQKKYTHNLQCYVSSIDVLAINGDLDNVK 117
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V + +G S + I+++ G + E + +++ + + ++N LL +
Sbjct: 118 SVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGL 177
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V +E+A + L ++ + + N ++ CQ ++ A F++M+ + PD
Sbjct: 178 VNSVFIESAERV-LEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPD 236
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +Y L++ + + L S++ + + G Y ++ LC +GK +
Sbjct: 237 KITYMTLIQACYAEGDFD----LCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGY 292
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
+ EK+++KG K + L N G L+ E + + G+ P + +Y +
Sbjct: 293 AVFEKMIQKGCKV--NVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVN 350
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ GR+ E + L+ R G + ++Y + + L K G V EA E + EEMVK
Sbjct: 351 CMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEA-EKLFEEMVKKGCP 409
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P YN L+ L G + A+ + K+M + GC TY I+++GL R+ + EA +
Sbjct: 410 PDSYCYNALIDALAKCGKTDEALAFFKRMEDE-GCDQTVYTYTIMINGLFREHKNEEALK 468
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ + M+ + P + L GLC GK A L+E+ +P+ +
Sbjct: 469 MWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETA 518
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 131/332 (39%), Gaps = 51/332 (15%)
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS-GEDIVIYR 229
L V++ M G P +Y+ L+ GL N + A +L M + G G D+V Y
Sbjct: 152 LWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVM-----ENGKIGPDVVTYN 206
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
T++ C GK Q A + D+E +
Sbjct: 207 TMIKGYCQVGKTQKAFEKFR--------------------------DME----------L 230
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
R P +Y + Y EG + EM G Y + L K+G E
Sbjct: 231 RNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVE 290
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
V E+ + KG V V +Y L+ GN A++ ++M K+ G + TYG++
Sbjct: 291 GYAVFEKMIQKGCKV-NVAIYTALIDSNAKCGNMGEAMLLFERMKKE-GLEPDVVTYGVV 348
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
V+ +C+ GR EA LE + Y+ LI GL G+ +EA EEM+ +
Sbjct: 349 VNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGC 408
Query: 470 LPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
PD +++L+ + L C KT E L+
Sbjct: 409 PPDSYCYNALIDA-------LAKCGKTDEALA 433
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ + +S R+ E E ++ + + ++++ I +AG+++EA LF+ +
Sbjct: 344 TYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEM 403
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C + +N L+ + K K + A + F + + + ++++ L + +
Sbjct: 404 VKKGCPPDSYCYNALIDALAKCGKTDEA-LAFFKRMEDEGCDQTVYTYTIMINGLFREHK 462
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ AL ++ M +G P ++ L GLC ++ A LL + + G +
Sbjct: 463 NEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDEL----APMGVIPETA 518
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ +L LC G+I++A ++ + + +G + P R
Sbjct: 519 -FEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVR 554
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
F+ V N L+K G ++++ + K+ G + TY L++GL A
Sbjct: 128 FLMNVSAANSLIKSFGSLG-MVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESA 186
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
RVLE M P V TYN +I+G C +GK +A +M + PD + +L+ +
Sbjct: 187 ERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQA 246
Query: 483 VCCNTADLNVC 493
C D ++C
Sbjct: 247 -CYAEGDFDLC 256
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 210/467 (44%), Gaps = 17/467 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS---CECKDSVF 83
AL+ F A+E Y H Y SM+ IL + + + + ++ S + + F
Sbjct: 95 ALQFFNWAQEM--GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ +R + RAG E++ +F + +FN+LL ++K + A ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ V + N+L+ C D +F ++ GC PD +Y+ L+ GLC ++
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A +++ M + ++V Y TL+ C + +I+ A+ + E+++ +GLKA
Sbjct: 273 VAYNVVKGMGKK--SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C + E K ++ G P +++ + + G + + KV + M
Sbjct: 331 NTLIKGLC-EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV------PTVRVYNILLKG 376
P Y A + +L + G ++A +++++ + + + P V YN + K
Sbjct: 390 SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKY 449
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ G + A +++ ++ + +Y L+ G C++G F +L ML + + P
Sbjct: 450 LCETGKTKKAEKAFRQLMRR--GTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLP 507
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ETY LI GL + K A+ LE+M+ + P+ S + S++A +
Sbjct: 508 DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKL 554
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 203/511 (39%), Gaps = 79/511 (15%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKN 105
+ S++ IL + R K+V D+M D+ F IR + G +++ +F +
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
LS+F C ++NTL+ + + K+ A+ ++ ++ + + L+ C
Sbjct: 246 LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAK 305
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--------------- 209
R + AL VF+EM QG + +Y+ L+KGLC R+ + +L
Sbjct: 306 REIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCT 365
Query: 210 -----------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+F R+S+ D Y L+ +LC G + A +L+K+L
Sbjct: 366 FNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLL 425
Query: 253 RK-------GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ G K + + I C G+ + K+ L+R G SY + +
Sbjct: 426 ERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF--RQLMRRGTQDPPSYKTLIMG 483
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE--EEMVKGTF 363
EG G ++L M K F P YE+ + L +D+ L ++ E+M++ +
Sbjct: 484 HCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLH---MDKPLLALQSLEKMLRSSH 540
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKM---------SKQVGCVA------------- 401
P ++ +L L + G ++ + ++ M S GCV
Sbjct: 541 RPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600
Query: 402 -----NGETYGI----LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G+ Y + L+ LC + ++ S++L L + ++ N +I LC I
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
K EA +++ +S + L S+
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSL 691
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++++ + G E KV M++ G PS+V + + L L K G + A +V +E +
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P +NIL++G C G +S+ GC + TY LVDGLCR G+
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSR-FGCEPDVVTYNTLVDGLCRAGK 270
Query: 419 FLEASRVLEEMLIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
A V++ M +S P V TY LIRG C+ + +A+ EEM++Q + +
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 477 SSLVASVC 484
++L+ +C
Sbjct: 331 NTLIKGLC 338
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 6/323 (1%)
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R + AL F G +SY +++ L +R LN A + L+S+ R S+ +
Sbjct: 90 RDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR-SRGIVKLE 148
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ +L+ G Q+++++ + G+ + + G AK +
Sbjct: 149 ARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR-TNMAKKVY 207
Query: 285 NEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+E L G+ P +++ + G + +G ++ +++ G P +V Y + L +
Sbjct: 208 DEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCR 267
Query: 344 DGMVDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G V A V++ K P V Y L++G C A+ ++M Q G AN
Sbjct: 268 AGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ-GLKAN 326
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+ GLC +F + +LE ++ P T+N L+ C G +A+
Sbjct: 327 NITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVF 386
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
E M PD + +S+LV S+C
Sbjct: 387 ERMSELKIQPDSATYSALVRSLC 409
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 185/391 (47%), Gaps = 8/391 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
++ A+S F + + T FN LL + K K + + + + I +L+
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAK-MKHHSTLLSLSHQMDSFGIPPNIYTLH 100
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C R A V ++ G PD ++ L++G+ + ++ EA HL F +
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHL----FDK 156
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G D+V Y TL+ LC G A+++L +++K + + I C D +
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E A +L +E + +G P + +Y+++ L N +L+EM P +V +
Sbjct: 217 VTE-AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 275
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA +V+++ + +G P V Y L+ G C AV M
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC+ N +Y L++G C+ R +A + EM + P TY+ LI GLC + +
Sbjct: 335 K-GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A+ EM++ +++P++ + L+ +C N
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKN 424
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 187/400 (46%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ ++ A S+ + + T +F TL++ + E K+ A LF + G
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDK-MIGEG 161
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L++ LC+ + A+ + M + C P+ +Y+ ++ LC DR++ EA
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA- 220
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+++F + KG DI Y +L+ ALC+ + + +L +++ + + +
Sbjct: 221 ---FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ E A ++++ + RG P++ +Y+A+ + E KV D M KG
Sbjct: 278 VDALCKEGKVTE-AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+++ Y + K +D+A+ + E M + +P Y+ L+ GLC A
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGE-MCRQELIPDTVTYSTLIHGLCHVERLQDA 395
Query: 387 VMYLKKMSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M V C + N TY IL+D LC++ EA +L+ + + P ++ N+
Sbjct: 396 IALFHEM---VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 452
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I G+C G+ A + S+ PD+ +S ++ +C
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 201/444 (45%), Gaps = 16/444 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ + + ++I + +I E + D+M G+ + T I + G + A+
Sbjct: 127 HQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 186
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L ++ Q NC ++NT++ + K+ ++ A LF + I + N L+
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF-SEMVTKGISPDIFTYNSLIHA 245
Query: 161 LCQ-CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC C +A + EM PD S++ ++ LC + ++ EA ++ M Q+
Sbjct: 246 LCNLCEWKHVAT-LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI----QR 300
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G ++V Y L+ C ++ +A+++ + ++ KG P + + + I+
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC-MPNVISYNTLINGYCKIQRIDK 359
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E + IP +YS + L + R+ + + EM P+LV Y L
Sbjct: 360 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 419
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K+ + EA+ +++ ++G+ + P ++V NI + G+C AG A +S + G
Sbjct: 420 YLCKNRYLAEAMALLKA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK-G 476
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIR--SYWPCVETYNVLIRGLCSIGKQYE 456
+ TY I+++GLCR G EAS++ EM + C+ YN + RG +
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI--YNTITRGFLRNNETSR 534
Query: 457 AVMWLEEMISQAKLPDISVWSSLV 480
A+ L+EM+++ D S + V
Sbjct: 535 AIQLLQEMVARGFSADASTMTLFV 558
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 44/335 (13%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +++ L + ++TE +V+D+M E + + + +++EAV +F +
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C+ S+NTL+ G+ C+ +R
Sbjct: 334 CKGCMPNVISYNTLIN--------------------GY----------------CKIQRI 357
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A+++F EM Q PD +Y L+ GLC+ RL +A L + M SQ ++V
Sbjct: 358 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA-CSQI---PNLVT 413
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
YR LL LC + +AM +L+ I L P + + I + C GE +E A+ L +
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKAIEGSNLD-PDIQVNNIAIDGMCRAGE-LEAARDLFSN 471
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P + +YS M L G + E K+ EM G + +Y ++
Sbjct: 472 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 531
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
A+++++E + +G F + +K L D G
Sbjct: 532 TSRAIQLLQEMVARG-FSADASTMTLFVKMLSDDG 565
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 174/374 (46%), Gaps = 16/374 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TL+ + K + AA + LR G V+ + N ++D LC+ + A + E
Sbjct: 171 SYGTLINGLCKTGETRAA-LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSE 229
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M + +PD +Y L+ G RL EA L M K D+ + L+ LC
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL----KNIKPDVYTFNILVDGLC 285
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI----EGAKSLINEALIRGG 292
+G+++ A +L ++++G+ + + + DG + A + N RG
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDS-----NIVTYNSLMDGYFLVKQENKATFVFNTMARRGV 340
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P + SYS M L + E + EM +K P+ V Y + + L K G + +A +
Sbjct: 341 TPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWD 400
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++ E +G V Y+ LL LC A+ + K+ Q G N TY ILVDG
Sbjct: 401 LVNEMHNRGQ-PADVITYSSLLDALCKNHQVDKAITLITKIKDQ-GIQPNIYTYTILVDG 458
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC++GR +A V +++LI+ Y V+ YNV++ GLC G EA+ + +M +PD
Sbjct: 459 LCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPD 518
Query: 473 ISVWSSLVASVCCN 486
+ +LV ++ N
Sbjct: 519 AVTYETLVRALFEN 532
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 183/393 (46%), Gaps = 9/393 (2%)
Query: 95 QLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
+++AVS F ++ N V FN +L +VK + A I F + +++ + +
Sbjct: 43 NVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTA-ISFSKQMELKQIQPDLFT 101
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N+L++ C + A V ++ G +PD + L+KGLC + ++ EA H
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF----H 157
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ KG D V Y TL+ LC G+ + A+Q+L KI ++ + I C D
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
I A L +E +++ P + +Y+ + GR+ E + ++M K P +
Sbjct: 218 KLVIH-ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ + L K+G + +A V+ M+K + YN L+ G A M
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAV-MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM 335
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+++ G + ++Y I+++GLC+ EA + +EM +S P TYN LI GL G+
Sbjct: 336 ARR-GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+A + EM ++ + D+ +SSL+ ++C N
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 189/403 (46%), Gaps = 10/403 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS 141
F I + G LN A S+ + + T + TL+K + K+ EA H
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ + S L++ LC+ + AL V +++D P+ Y+ ++ LC D+
Sbjct: 162 AKGFHLDQV--SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ A+ L M K D+V Y TL++ G++++A+ + ++L K +K
Sbjct: 220 VIHASDLCSEMIV----KRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVY 275
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +GE ++ A++++ + +G ++ +Y+++ + + + V +
Sbjct: 276 TFNILVDGLCKEGE-MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P + Y + L K MVDEA+ + +E M + P YN L+ GL G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE-MHSKSMAPNTVTYNSLIDGLLKYG 393
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A + +M + G A+ TY L+D LC++ + +A ++ ++ + P + TY
Sbjct: 394 RISDAWDLVNEMHNR-GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTY 452
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L+ GLC G+ +A ++++ + D+ +++ +V +C
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 35/314 (11%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ T I G+L EAV LF + N +FN L+ + KE +++ A + L
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV-LAVM 300
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V S I + N LMD ++ + A VF M +G PD +SY I++ GLC + +
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360
Query: 203 NEATHLLYSM---------------------FWRIS----------QKGSGEDIVIYRTL 231
+EA +L M + RIS +G D++ Y +L
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIR 290
L ALC ++ A+ ++ KI +G++ P + I + C +G ++ A+++ + LI+
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQ-PNIYTYTILVDGLCKNGR-LKDAQAVYQDLLIK 478
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G + Y+ M L EG E ++ +M G P V YE + ALF++ D+A
Sbjct: 479 GYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538
Query: 351 LEVIEEEMVKGTFV 364
++++ E +V+G+ V
Sbjct: 539 VKLLREMIVQGSAV 552
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 7/314 (2%)
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ + M +GC PD +Y +++ GLC T L +++ ++ Q ++IY T
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCK----RGDTDLAFNLLNKMEQGKLEPGVLIYNT 56
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ LC + DA+ + +++ KG++ + C CN G A L+++ + R
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDMIER 115
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P + ++SA+ EG++VE +K+ DEM + PS+V Y + + +DEA
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ E + K F P V YN L+KG C + ++MS Q G V N TY IL+
Sbjct: 176 KQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILI 233
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GL + G A + +EM+ P + TYN L+ GLC GK +A++ E +
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 471 PDISVWSSLVASVC 484
P I ++ ++ +C
Sbjct: 294 PTIYTYNIMIEGMC 307
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 170/333 (51%), Gaps = 9/333 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++++ LC+ +DLA ++ +M+ P Y+ ++ GLC + +++A +L
Sbjct: 18 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL---- 73
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F + KG ++V Y +L+ LC+ G+ DA ++L ++ + + +
Sbjct: 74 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+G+ +E A+ L +E + R PS+ +YS++ R+ E ++ + M +K +P +V
Sbjct: 134 EGKLVE-AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K V+E +EV E +G TV YNIL++GL AG+ +A K+
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKE 251
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSI 451
M G N TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C
Sbjct: 252 MVSD-GVPPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GK + + + PD+ ++++++ C
Sbjct: 310 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 160/329 (48%), Gaps = 13/329 (3%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N ++D LC+ + D AL++F+EM+ +G P+ +Y L+ LCN R ++A+ LL M
Sbjct: 55 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R D+ + L+ A +GK+ +A ++ ++++++ + + C
Sbjct: 115 RKINP----DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH- 169
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ ++ AK + + + P + +Y+ + R+ EG +V EM +G + V Y
Sbjct: 170 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLK 391
+ LF+ G D A E+ +E MV P + YN LL GLC G + V YL+
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKE-MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+ SK + TY I+++G+C+ G+ + + + ++ P V YN +I G C
Sbjct: 289 R-SKMEPTIY---TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G + EA +EM LP+ +++L+
Sbjct: 345 GSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 174/415 (41%), Gaps = 48/415 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +L + + K K AL +FKE + K R N Y+S+I L R ++
Sbjct: 49 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETK--GIRPNVVTYSSLISCLCNYGRWSDAS 106
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M F+ I + + G+L EA L+ EM
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD-------------------EM 147
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VK S + I + + L++ C R D A +F+ M + C+PD
Sbjct: 148 VKRS-----------------IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+KG C +R+ E + F +SQ+G + V Y L+ L G A
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEV----FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
+I ++++ G+ + + C +G+ +E A ++ E L R + P++ +Y+ M
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGK-LEKA-MVVFEYLQRSKMEPTIYTYNIMIE 304
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ G++ +G + + KG P +V Y ++ + G +EA + +E GT +
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT-L 363
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
P YN L++ G+ + +K+M + G + T G LV + DGR
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEM-RSCGFAGDASTIG-LVTNMLHDGRL 416
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 89/209 (42%), Gaps = 5/209 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P ++T L + K K +++F+E ++ N Y +I L ++
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMA 245
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E+ +M D + T + + G+L +A+ +F+ L + ++N +++
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305
Query: 125 MVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
M K K+E LF S G VK + + N ++ C+ + A +F+EM G
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKG--VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSM 212
P+ Y+ L++ D + L+ M
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEM 392
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 210/467 (44%), Gaps = 17/467 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS---CECKDSVF 83
AL+ F A+E Y H Y SM+ IL + + + + ++ S + + F
Sbjct: 95 ALQFFNWAQEM--GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ +R + RAG E++ +F + +FN+LL ++K + A ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ V + N+L+ C D +F ++ GC PD +Y+ L+ GLC ++
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A +++ M + ++V Y TL+ C + +I+ A+ + E+++ +GLKA
Sbjct: 273 VAYNVVKGMGKK--SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + C + E K ++ G P +++ + + G + + KV + M
Sbjct: 331 NTLIKGLC-EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV------PTVRVYNILLKG 376
P Y A + +L + G ++A +++++ + + + P V YN + K
Sbjct: 390 SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKY 449
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ G + A +++ ++ + +Y L+ G C++G F +L ML + + P
Sbjct: 450 LCETGKTKKAEKAFRQLMRR--GTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXP 507
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ETY LI GL + K A+ LE+M+ + P+ S + S++A +
Sbjct: 508 DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKL 554
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 203/511 (39%), Gaps = 79/511 (15%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKN 105
+ S++ IL + R K+V D+M D+ F IR + G +++ +F +
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
LS+F C ++NTL+ + + K+ A+ ++ ++ + + L+ C
Sbjct: 246 LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAK 305
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--------------- 209
R + AL VF+EM QG + +Y+ L+KGLC R+ + +L
Sbjct: 306 REIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCT 365
Query: 210 -----------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+F R+S+ D Y L+ +LC G + A +L+K+L
Sbjct: 366 FNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLL 425
Query: 253 RK-------GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ G K + + I C G+ + K+ L+R G SY + +
Sbjct: 426 ERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF--RQLMRRGTQDPPSYKTLIMG 483
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE--EEMVKGTF 363
EG G ++L M K F P YE+ + L +D+ L ++ E+M++ +
Sbjct: 484 HCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLH---MDKPLLALQSLEKMLRSSH 540
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKM---------SKQVGCVA------------- 401
P ++ +L L + G ++ + ++ M S GCV
Sbjct: 541 RPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600
Query: 402 -----NGETYGI----LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
G+ Y + L+ LC + ++ S++L L + ++ N +I LC I
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
K EA +++ +S + L S+
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSL 691
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++++ + G E KV M++ G PS+V + + L L K G + A +V +E +
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P +NIL++G C G +S+ GC + TY LVDGLCR G+
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSR-FGCEPDVVTYNTLVDGLCRAGK 270
Query: 419 FLEASRVLEEMLIRS--YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
A V++ M +S P V TY LIRG C+ + +A+ EEM++Q + +
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 477 SSLVASVC 484
++L+ +C
Sbjct: 331 NTLIKGLC 338
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 13/337 (3%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+Q+L L D + AL F G +SY +++ L +R LN A + L+
Sbjct: 83 LQTLGFLRD-------TSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLF 135
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ R S+ + + +L+ G Q+++++ + G+ + +
Sbjct: 136 SIEKR-SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTIL 194
Query: 271 CNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G AK + +E L G+ P +++ + G + +G ++ +++ G P
Sbjct: 195 LKRGR-TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEP 253
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAVM 388
+V Y + L + G V A V++ K P V Y L++G C A+
Sbjct: 254 DVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALA 313
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVETYNVLIRG 447
++M Q G AN TY L+ GLC +F + +LE ++ P T+N L+
Sbjct: 314 VFEEMVNQ-GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHC 372
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G +A+ E M PD + +S+LV S+C
Sbjct: 373 HCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLC 409
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 200/410 (48%), Gaps = 13/410 (3%)
Query: 82 VFATAIRTYA----RAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
+F ++IR ++ + + N +S F +L N T FN +L +VK +K + +
Sbjct: 23 LFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVK-AKHHSTAL 81
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ ++S + N+L++ Q + L+ +F ++ +G +P +++ L+KGL
Sbjct: 82 SLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGL 141
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C +++A H ++ +G D V Y TL+ LC G+I A+Q+L+++ K L
Sbjct: 142 CLKGHIHQALHF----HDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK-L 196
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P + + + + + + A L ++ + + P + +Y+A+ ++
Sbjct: 197 VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAI 256
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ ++M+ + P++ + + K+G V++A +V+ M+K P V YN L+ G
Sbjct: 257 DLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA-KVVLAIMMKDDIKPDVVTYNSLMDG 315
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A M+ G +AN + Y +V+G C+ EA + EEM R P
Sbjct: 316 YCSINKVNKAKDIFDSMASG-GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIP 374
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TY+ LI GLC +G+ + A+ ++EM + + P+I +SS++ ++C N
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN 424
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 185/403 (45%), Gaps = 12/403 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T I+ G +++A+ + S+ TL+ + K ++ AA + L+
Sbjct: 134 FNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA-LQLLKRV 192
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V+ N+++D +C+ + + A ++ +M + PD +Y+ L+ G +L
Sbjct: 193 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N A L F ++ ++ ++ + L+ C +GK+ DA +L +++ +K
Sbjct: 253 NYAIDL----FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVT 308
Query: 263 RHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C N + AK + + G I ++ Y+ M + E + +
Sbjct: 309 YNSLMDGYCSINK---VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFE 365
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EMR + P++V Y + + L K G + AL++++E +G P + Y+ +L LC
Sbjct: 366 EMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ-PPNIVTYSSILDALCKN 424
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
+ A+ L + Q G + TY IL+ GLC+ GR +A V E++L++ Y V
Sbjct: 425 HHVDKAIALLTNLKDQ-GIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYA 483
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
Y V+I+G C G +A+ L +M +P+ + ++ S+
Sbjct: 484 YTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 43/423 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + RIT +++ ++ G + ++ I +A +N+A L+ +
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ SKL A LF + + + N+L+D C+ +
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLF-NKMKKENINPNVYTFNILVDGFCKEGKV 287
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A V M PD +Y+ LM G C+ ++N+A + SM + G ++ I
Sbjct: 288 NDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM----ASGGVIANVQI 343
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ C + +A+ + E E
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFE------------------------------------EM 367
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R IP++ +YS++ L GRI K++DEM +G P++V Y + L AL K+ V
Sbjct: 368 RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHV 427
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A+ ++ +G P + Y IL+KGLC +G A + + + G + Y
Sbjct: 428 DKAIALLTNLKDQGI-RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK-GYNLDVYAYT 485
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++ G C G F +A +L +M P +TY ++I L + A L EMI +
Sbjct: 486 VMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545
Query: 468 AKL 470
L
Sbjct: 546 GLL 548
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 214/459 (46%), Gaps = 24/459 (5%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+R N + ++I + +R+ + ++ +M+ S++ I + +L++A
Sbjct: 74 NFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKA 133
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL--------EAAHI----LFLRSCYGWEV 147
+SL+ + + L+ +E KL E +I L S V
Sbjct: 134 LSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLV 193
Query: 148 KSRI--QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
S + ++ LL +++ D+ +F++ + P+ S+ I++ GL +L+ A
Sbjct: 194 NSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIR---PNTASFSIVINGLMQACKLDLA 250
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L F +++ G D+++Y L+ LC+ +++++ ++L+++ G K + +
Sbjct: 251 VCL----FQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNS 306
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
I C C +D+ GA L+ + + G P + Y+ + L G+ E L +M +
Sbjct: 307 IFGCLCKR-QDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQE 365
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P+++ Y A L L + VD+AL++ ++ +G P V YNIL+KGL +A +
Sbjct: 366 GFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGR-CPDVIAYNILMKGLYEAHRTEE 424
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +M + G + + TY +L+DG C++G +A L M + P V TY LI
Sbjct: 425 ARNLFNEMVMK-GLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLI 483
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +AVM EM + P+ + + +C
Sbjct: 484 DGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLC 522
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 178/419 (42%), Gaps = 24/419 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR- 140
VF+ + ++++ GQ++++ + + + N ++F L+ VK+S+++ LF +
Sbjct: 46 VFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKM 105
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
YG + I ++L+ C ++ D AL ++ EM PD L+
Sbjct: 106 QKYG--LSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISS----- 158
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE----------- 249
E L+ + + ++ ++L +L + G I A +L
Sbjct: 159 -FPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDV 217
Query: 250 --KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
K+ R P + I + ++ A L + G L Y+ + L
Sbjct: 218 QYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLC 277
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
N R+ E K+L EM GF P+ + L K V AL+++++ + G P V
Sbjct: 278 NSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGC-EPWV 336
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+ Y +L++ LC G +A A ++L M ++ G N Y L+ GL +A ++ +
Sbjct: 337 KHYTLLVRKLCKHGKAAEASIFLTDMVQE-GFPPNIIAYSALLGGLIEVQEVDQALKLFK 395
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++ R P V YN+L++GL + EA EM+ + +P + ++ L+ C N
Sbjct: 396 DISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKN 454
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 165/383 (43%), Gaps = 65/383 (16%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+L ++ V C + D AL+VF E+ G + D + IL+ +++++ + M
Sbjct: 12 TLTPVLQVYCNAGKFDEALNVFNEIQDHG-WLDAYVFSILVLSFSKWGQVDKSFEFIEKM 70
Query: 213 ---FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+R+++K + L+ Q ++ +Q+ K+ + GL +P + + +
Sbjct: 71 EEQNFRLNEK-------TFCNLIHGFVKQSRVDKGVQLFYKMQKYGL-SPDISLYDVLIG 122
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG-DKVLDEMRTKGFW 328
+ ++ A SL E + P + S + EG++++ ++ L++M +
Sbjct: 123 GFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIE--- 179
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG-------------TFVPTVRVYNILLK 375
++ + L++L G++D+A ++ M G P ++I++
Sbjct: 180 TQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVIN 239
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM------ 429
GL A +AV + M+ ++GC + Y L++GLC R E+ ++L+EM
Sbjct: 240 GLMQACKLDLAVCLFQDMA-EIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFK 298
Query: 430 ---------------------------LIRSYW--PCVETYNVLIRGLCSIGKQYEAVMW 460
+R Y P V+ Y +L+R LC GK EA ++
Sbjct: 299 PTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIF 358
Query: 461 LEEMISQAKLPDISVWSSLVASV 483
L +M+ + P+I +S+L+ +
Sbjct: 359 LTDMVQEGFPPNIIAYSALLGGL 381
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
MR +G S L G DEAL V E G V++IL+ G
Sbjct: 1 MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWL--DAYVFSILVLSFSKWG 58
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ +++KM +Q N +T+ L+ G + R + ++ +M P + Y
Sbjct: 59 QVDKSFEFIEKMEEQ-NFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLY 117
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+VLI G CS K +A+ EM PDI V S L++S +++ +TLE ++
Sbjct: 118 DVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMN 177
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 216/511 (42%), Gaps = 76/511 (14%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ L ++ + ++++++K V+ I + + G+ +EA LFK + +
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+++ L+ + KL+ A I FL +K + N L++ C+
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTA-IHFLGKMIMAGIKITVYPYNSLINGHCKLGNLS 453
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A+ F EM +G P SY L+ G CN +L+EA L + M + KG + +
Sbjct: 454 AAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM----TGKGIAPNTYTF 509
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ AL ++ DA ++ +++L + + + + + C +G ++ A L+N+ +
Sbjct: 510 TTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK-AFELLNQMV 568
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+G +P +Y + L + GR+ E K +D++ + F + + Y A L K+G +
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----------- 397
+AL V E + +G + V Y +L+ G +++ LK M Q
Sbjct: 629 DALGVCREMVKRGVDMDLV-CYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687
Query: 398 -----------------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GC N TY L++ LC+ G +A + +EML+ +
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747
Query: 435 WPCVET----------------------------------YNVLIRGLCSIGKQYEAVMW 460
P T YN+L+RG C +G+ EA
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKL 807
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLN 491
L+EMI A PD +S+++ CC +L+
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQ-CCRRGNLD 837
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 169/370 (45%), Gaps = 49/370 (13%)
Query: 117 SFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
F+ L++ V+E ++ + ++F +R C E+ ++++L +++ L + RR D+ L +F
Sbjct: 160 GFDLLIQSYVQEKRMFDSVLIFRLMRQC---ELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
E+ G PD Y +++ C + +A ++ M + S ++V+Y L+
Sbjct: 217 GEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM------ESSDLNVVVYNVLIHG 270
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC ++ +A++I +++KGL A
Sbjct: 271 LCKNKRVWEAVEIKNGLIQKGLTA------------------------------------ 294
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S +Y + + L G V+DEM GF P+ + + L + G V +A +++
Sbjct: 295 SEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLV 354
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
G +P++ VYN L+ LC G A + K+M ++ G AN TY IL+D C
Sbjct: 355 NRVKKVGA-MPSLFVYNALINSLCKDGKFDEAELLFKEMGEK-GLCANDVTYSILIDSFC 412
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R G+ A L +M++ V YN LI G C +G AV + +EMI + P +
Sbjct: 413 RRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVV 472
Query: 475 VWSSLVASVC 484
++SL++ C
Sbjct: 473 SYTSLISGYC 482
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 212/496 (42%), Gaps = 47/496 (9%)
Query: 30 IFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRT 89
+FKE EK N Y+ +I ++ + +M + + + I
Sbjct: 388 LFKEMGEK--GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLING 445
Query: 90 YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
+ + G L+ AVS F + S+ +L+ + KL A L+ G +
Sbjct: 446 HCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY-HEMTGKGIAP 504
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ L+ L + R A +F EM Q P+ +Y+++++G C + +A LL
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELL 564
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP---------- 259
M QKG D YR L+ +LC G++ +A + ++ + R+ K
Sbjct: 565 NQMV----QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620
Query: 260 --KSRRHRIDLCPCND----GED---------IEGAKSLINEALIRGGI---------PS 295
K R R L C + G D I+G + + + G + P
Sbjct: 621 YCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680
Query: 296 LASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
Y++M ID Y++ G + + + D M +G P++V Y + L K G++D+A E++
Sbjct: 681 KVIYTSM-IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA-ELL 738
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+EM+ P Y L L G+ AV M K G +AN +Y ILV G C
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK--GLLANTVSYNILVRGFC 796
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ GR EA+++L+EM+ + +P TY+ +I C G A+ + + M+++ PD
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856
Query: 475 VWSSLVASVCCNTADL 490
++ L+ CC +L
Sbjct: 857 AYNFLIYG-CCIAGEL 871
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 174/436 (39%), Gaps = 44/436 (10%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I L +NR+T+ + D+M + + + I + + G +A L
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELL 564
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ Q V T ++ L+ + ++ A F+ + K + L+ C+
Sbjct: 565 NQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK-KFIDDLHREHFKLNEMCYSALLHGYCK 623
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R AL V +EM +G D Y +L+ G + + T ++ + + +
Sbjct: 624 EGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE----QDTSAVFGLLKNMHDQRLRP 679
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D VIY +++ G ++ A I + ++ +G C
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG---------------CT----------- 713
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+ + +L G + + + + EM P+ V Y L L +
Sbjct: 714 ----------PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G +++A++ + +M+KG TV YNIL++G C G A L +M +
Sbjct: 764 EGSMEKAVQ-LHNDMLKGLLANTVS-YNILVRGFCKLGRVEEATKLLDEMIDN-AIFPDC 820
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++ CR G A + ML + P YN LI G C G+ +A ++
Sbjct: 821 ITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDD 880
Query: 464 MISQAKLPDISVWSSL 479
MI + P+ + SL
Sbjct: 881 MIRRGVKPNQATHKSL 896
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 8/368 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+FNTL+ + K K A LF + + + +++ LC+ + A +F++
Sbjct: 194 TFNTLINGLCKVGKFGQAVELF-DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC PD +Y ++ LC DRR+NEA +F + KG +I Y +L+ LC
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEA----LDIFSYMKAKGISPNIFTYNSLIQGLC 308
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ + ++A +L +++ + + C +G E A+ ++ G P++
Sbjct: 309 NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFE-ARGVLKTMTEMGVEPNV 367
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+YS++ + +VE K+ D M TKG P + Y + K + EA ++ E
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M+ P + YN L+ GLC G A K M G + + TY IL+DG C+
Sbjct: 428 -MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN-GNLPDLCTYSILLDGFCKQ 485
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +A R+ M P + YN+LI +C EA E+ Q P++ ++
Sbjct: 486 GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545
Query: 477 SSLVASVC 484
++++ +C
Sbjct: 546 TTIINGLC 553
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 8/383 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G+ +AV LF ++ ++ T++ + K + AA LF R
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLF-RK 252
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + ++D LC+ RR + AL +F M +G P+ +Y+ L++GLCN R
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA+ +L M +IV + L+ C +G + +A +L+ + G++ P
Sbjct: 313 WREASAMLNEMM----SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE-PNV 367
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + ++ A+ L + + +G P + SY+ + RI E ++ +E
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P +V Y + L + G + EA ++ + + G +P + Y+ILL G C G
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN-LPDLCTYSILLDGFCKQG 486
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A A + M + N Y IL+D +C+ EA ++ E+ ++ P V+ Y
Sbjct: 487 YLAKAFRLFRAM-QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545
Query: 442 NVLIRGLCSIGKQYEAVMWLEEM 464
+I GLC G EA+ M
Sbjct: 546 TTIINGLCKEGLLDEALEAFRNM 568
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 151/334 (45%), Gaps = 42/334 (12%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N L++ LC+ + A+ +F +M +G PD +Y ++ GLC ++ E T
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC---KIGE-TVAAA 247
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F ++ + G D+V Y T++ +LC ++ +A+ I + KG+
Sbjct: 248 GLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS------------- 294
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
P++ +Y+++ L N R E +L+EM + P+
Sbjct: 295 -----------------------PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V + + K+G V EA V++ M + P V Y+ L+ G A
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKT-MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M + GC + +Y IL++G C+ R EA ++ EM+ + P + +YN LI GLC
Sbjct: 391 DVMITK-GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ EA + M++ LPD+ +S L+ C
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 8/335 (2%)
Query: 151 IQSLNLLMDVLCQCRR-SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
I N L+ + + R D + + ++M+ G PD + H+L+ +R++ L
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVD----LG 176
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+S+ +I + G IV + TL+ LC GK A+++ + ++ +G + I
Sbjct: 177 FSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIING 236
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C GE + A L + G P + +YS + L + R+ E + M+ KG P
Sbjct: 237 LCKIGETV-AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 295
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++ Y + + L EA ++ EM+ +P + +++L+ C GN A
Sbjct: 296 NIFTYNSLIQGLCNFSRWREASAML-NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
LK M+ ++G N TY L++G +EA ++ + M+ + P V +YN+LI G C
Sbjct: 355 LKTMT-EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA EMI Q PDI +++L+ +C
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 448
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 170/400 (42%), Gaps = 8/400 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ + Y ++I L + + +M C+ ++T I + + ++NEA+
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + ++N+L++ + S+ A + L + I + +LL+++
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM-LNEMMSLNIMPNIVTFSLLINI 341
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ A V + M G P+ +Y LM G + EA L M KG
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI----TKG 397
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ Y L+ C +I +A Q+ +++ +GL + + C G + A
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR-LREA 456
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L L G +P L +YS + +G + + ++ M++ P++VMY + A
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K + EA ++ E V+G P V++Y ++ GLC G A+ + M + GC
Sbjct: 517 MCKSRNLKEARKLFSELFVQG-LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEED-GCP 574
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
N +Y +++ G + A +++ EM + + V T
Sbjct: 575 PNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
R+ G VL ++ G ++V + + L K G +A+E+ ++ + +G + P V Y
Sbjct: 172 RVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG-YQPDVHTY 230
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
++ GLC G + A +KM + GC + TY ++D LC+D R EA + M
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P + TYN LI+GLC+ + EA L EM+S +P+I +S L+ ++ C ++
Sbjct: 290 AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI-NIFCKEGNV 348
Query: 491 NVCRKTLEQLS 501
R L+ ++
Sbjct: 349 FEARGVLKTMT 359
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 8/293 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L I K+ + A + K E N Y+S++ S + E +
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEM--GVEPNVVTYSSLMNGYSLQAEVVEAR 387
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C+ + I Y +A ++ EA LF + S+NTL+ +
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ +L AH LF + + + ++L+D C+ A +F+ M P+
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPD-LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN 506
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+IL+ +C R L EA L +F +G ++ IY T++ LC +G + +A+
Sbjct: 507 MVMYNILIDAMCKSRNLKEARKLFSELFV----QGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ + G P + + + +D A LI E +G + +A+
Sbjct: 563 EAFRNMEEDGC-PPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P ++ + L+A+ K +A+ + ++M P ++L+ +
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L K+ K +G T+ L++GLC+ G+F +A + ++M+ R Y P V TY +I GL
Sbjct: 179 VLAKIIK-LGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C IG+ A +M PD+ +S+++ S+C
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 190/431 (44%), Gaps = 50/431 (11%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L ++NR+ ++++D+M C D +AT + + +L+EA + +
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV----- 200
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
S+N ++ + +E +++ + + G ++ + + ++D C+ +A +
Sbjct: 201 AASYNAIVLALCREFRMQEVFSV-VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIVIYRTLLF 233
M GC P+ ++ L++GL +D R+++A + WR + +G V Y L+
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM-----WRWMVAEGWAPSTVSYNILIR 314
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC G D++GA S++N G
Sbjct: 315 GLCSVG------------------------------------DLKGASSILNSMEQHGCF 338
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +YS + G + + ++M G P++V+Y + K M ++A +
Sbjct: 339 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 398
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
I++ +++ P +N L++ LCD A+ +M + GCV NG TY L+ GL
Sbjct: 399 IDKMLLENC-PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRH-GCVPNGRTYNELIHGL 456
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R+G +A ++ EM + TYN ++ GLC EA++++ +MI Q P+
Sbjct: 457 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 516
Query: 474 SVWSSLVASVC 484
+S+++ + C
Sbjct: 517 FTFSAIIHAYC 527
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 45/307 (14%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+PN R Y+++I S++ + + + M C+ V+ + + + N
Sbjct: 338 FPNVR----TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 393
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+A SL + NC T +FNTL++
Sbjct: 394 QAKSLIDKMLLENCPPNTVTFNTLIRS--------------------------------- 420
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
LC CRR AL VF EM GC P+ +Y+ L+ GL + +A H++ M
Sbjct: 421 ---LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM----Q 473
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G +V Y T++ LC ++AM + K++ +G++ I C +GE +
Sbjct: 474 SHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE-V 532
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A ++ + ++ Y+ + +L N+ ++V+ L +M +G +P+ V +
Sbjct: 533 RMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVL 592
Query: 338 LAALFKD 344
+ +F++
Sbjct: 593 VRGVFRN 599
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 195/437 (44%), Gaps = 49/437 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L S + EV +M F I + R G++ EA+ ++K +
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--CYGWEVKSRIQSLNLLMDVLCQC 164
SF+ L+ + K++ A + +LR C+G I ++ ++ C+
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHA-MAYLREMRCFGLVPDGVIYTM--VIGGFCRA 283
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V EM GC PD +Y+ L+ GLC +RRL +A LL M ++G D
Sbjct: 284 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM----RERGVPPD 339
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ + TL+ C +GK+ A+Q+ + +L + L+
Sbjct: 340 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR--------------------------- 372
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
P + +Y+ + + +G + + + + D+M ++ +P+ V Y + + +
Sbjct: 373 ---------PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V++A ++E + KG +P + YN ++KG C +GN + +L+KM V V+
Sbjct: 424 GQVEDAFGFLDEMINKG-ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM--MVNKVSPDL 480
Query: 405 -TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ G ++ + +A ++L M P V TYN+LI G G EA E+
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 540
Query: 464 MISQAKLPDISVWSSLV 480
M ++ PD + S++
Sbjct: 541 MCAKGIEPDRYTYMSMI 557
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 184/395 (46%), Gaps = 10/395 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ Y +A + ++ ++ + + + N ++ + EAA L + S
Sbjct: 102 VHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL-VDSMVSKG 160
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+K I + N ++ LC+ D A VF+EMD G PD S+ IL+ G C + EA
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ M +G D+V + L+ +GK+ AM L ++ GL P + +
Sbjct: 221 KIYKEM----RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL-VPDGVIYTM 275
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + A + +E + G +P + +Y+ + L E R+++ + +L+EMR +G
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P L + + +G +D+AL++ + M+ P + YN L+ G+C G+ A
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDT-MLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394
Query: 387 VMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
M S+++ N TY IL+D C G+ +A L+EM+ + P + TYN +I
Sbjct: 395 NDLWDDMHSREI--FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G C G + +L++M+ PD+ +++L+
Sbjct: 453 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 204/471 (43%), Gaps = 44/471 (9%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E++ + G S + VF IRTY ++ + EA F+ + + N LL
Sbjct: 10 REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + A + R + + +LN+++ C+ D V EM+ + +P
Sbjct: 70 LSRAGWPHLAADAY-RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP 128
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D ++++++ A L+ SM KG IV Y ++L LC G A
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMV----SKGLKPGIVTYNSVLKGLCRSGMWDKA 184
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ +++ G+ AP R I + C GE IE A + E RG P L S+S +
Sbjct: 185 WEVFKEMDDFGV-APDVRSFTILIGGFCRVGE-IEEALKIYKEMRHRGIKPDLVSFSCLI 242
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G++ L EMR G P V+Y + + G++ +AL V +EMV
Sbjct: 243 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV-RDEMVGCGC 301
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-------------VGCVANGE------ 404
+P V YN LL GLC A L +M ++ G G+
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361
Query: 405 ---------------TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
TY L+DG+CR G +A+ + ++M R +P TY++LI C
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
G+ +A +L+EMI++ LP+I ++S++ C + +++ +K L+++
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY-CRSGNVSKGQKFLQKM 471
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 177/389 (45%), Gaps = 8/389 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG A++L ++ ++N++LK + + + A +F + + V +
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF-KEMDDFGVAPDV 200
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+S +L+ C+ + AL +++EM +G PD S+ L+ +++ A L
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G D VIY ++ C G + DA+++ ++++ G P + L
Sbjct: 261 M----RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC-LPDVVTYNTLLNGL 315
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ A+ L+NE RG P L +++ + EG++ + ++ D M + P +
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + + + G +D+A ++ ++ + F P Y+IL+ C+ G A +L
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIF-PNHVTYSILIDSHCEKGQVEDAFGFLD 434
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G + N TY ++ G CR G + + L++M++ P + TYN LI G
Sbjct: 435 EMINK-GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
K ++A L M + PD+ ++ L+
Sbjct: 494 DKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 139/350 (39%), Gaps = 42/350 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G +Y +IG + +++ V D+M G C C V
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVG--CGCLPDVV-------------------- 306
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++NTLL + KE +L A L L V + + L+ C
Sbjct: 307 -------------TYNTLLNGLCKERRLLDAEGL-LNEMRERGVPPDLCTFTTLIHGYCI 352
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D AL +F M Q PD +Y+ L+ G+C L++A L M R
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH-- 410
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
V Y L+ + C++G+++DA L++++ KG+ + I C G +G K
Sbjct: 411 --VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK-F 467
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + ++ P L +Y+ + E ++ + K+L+ M + P +V Y +
Sbjct: 468 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 527
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
G V EA + E+ KG P Y ++ G AGNS A +M
Sbjct: 528 HGNVQEAGWIFEKMCAKG-IEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 33 EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
++E +PN+ Y+ +I E ++ + +D+M + + I+ Y R
Sbjct: 402 HSREIFPNH----VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 457
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
+G +++ + + ++NTL+ +KE K+ A L L +V+ +
Sbjct: 458 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL-LNMMEKEKVQPDVV 516
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N+L++ A +F++M +G PDR +Y ++ G EA L M
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Query: 213 FWRISQK 219
R +K
Sbjct: 577 LQRGKEK 583
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 173/403 (42%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G+ +A+ LF ++ C ++ T++ + K + AA L L+
Sbjct: 170 TFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL-LKK 228
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + ++D + RR + AL +F M +G PD +Y+ L++GLCN +
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA+ LL M DIV + L+ +C +GK+ +A +L+ + G++
Sbjct: 289 WKEASALLNEM----RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE---- 340
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P + +YS++ +VE K+ D
Sbjct: 341 --------------------------------PDVVTYSSLMYGYSLRSEVVEARKLFDA 368
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M TKG P + Y + K +DEA ++ E M+ P YN L+ GLC G
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNE-MIHQGLTPNNVSYNTLIHGLCQLG 427
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A K M G + N TY IL+DG C+ G F +A R+ M P + Y
Sbjct: 428 SLREARNLFKNMHTN-GNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N+LI +C G +A E+ + P+ ++++++ +C
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 191/431 (44%), Gaps = 12/431 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + + E+ D M C + T I + G+ A L K +
Sbjct: 170 TFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM 229
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C +++T++ K+ ++ EA I G + I + N L+ LC
Sbjct: 230 EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG--ISPDIFTYNSLIQGLCNFS 287
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A + EM PD ++++L+ +C + +++EA +L +M ++ G D+
Sbjct: 288 QWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM----TEMGVEPDV 343
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y +L++ + ++ +A ++ + ++ KG K P + I + + I+ AK L N
Sbjct: 344 VTYSSLMYGYSLRSEVVEARKLFDAMITKGCK-PDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + +G P+ SY+ + L G + E + M T G P+L Y L K G
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462
Query: 346 MVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+A + ++ T+ P + +YNIL+ +C +GN A ++ + G N +
Sbjct: 463 YFGKAFRLFRA--MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK-GLQPNAQ 519
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y +++GLC++G EA M P +YNV+IRG + AV + EM
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579
Query: 465 ISQAKLPDISV 475
+ + D+
Sbjct: 580 RDKGFIADVGT 590
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 170/390 (43%), Gaps = 7/390 (1%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+++A++ F ++ + F LL +VK + I + + I +L
Sbjct: 77 NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
++L++ +R DLA V ++ G P ++ L+ LC + +A L M
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R G D+ Y T++ LC G+ A +L+K+ G + P + +
Sbjct: 197 R----GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQ-PNVVTYSTIIDSHRKD 251
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ A + + ++G P + +Y+++ L N + E +L+EMR+ P +V +
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + K+G V EA V++ M + P V Y+ L+ G A M
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKT-MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ GC + +Y IL++G C+ R EA ++ EM+ + P +YN LI GLC +G
Sbjct: 371 TK-GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA + M + LP++ +S L+ C
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFC 459
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 203/481 (42%), Gaps = 48/481 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I +L + R+ E KE +++M + + + I Y + G + A+ +FK +
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++ +L+ ++++ KL A L + + + + L+ C+
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVITYTTLIQGQCKKHEF 544
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-----------THLLYS----- 211
D A +F+ M+ G PD ++Y++L LC R EA T + Y+
Sbjct: 545 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604
Query: 212 ------------MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ ++ +G D+ Y LL ALC Q K+ +A+ IL+++ G+K
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I +G+ + AKSL NE + G PS +Y+ GRI E + ++
Sbjct: 665 IVAYTIIISEMIKEGKH-DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLI 723
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK---- 375
EM G P +V Y + G +D A ++ MV + P Y +LLK
Sbjct: 724 GEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR-MVDASCEPNCWTYWLLLKHFLK 782
Query: 376 -GLCDAGNSAVAVMY-----------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
L +A + M+ L++M K G TY ++ G C+ R EA
Sbjct: 783 MSLINAHYVDTSGMWNWIELNMVWQLLERMMKH-GLNPTVVTYSSIIAGFCKATRLEEAC 841
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L+ ML + P E Y +LI+ C I +AV ++ +MI P + + L+ +
Sbjct: 842 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGL 901
Query: 484 C 484
C
Sbjct: 902 C 902
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 224/538 (41%), Gaps = 73/538 (13%)
Query: 9 LTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSE-------- 57
+T +++ + + SPL TAL F E + P +RH +A+++ +L+
Sbjct: 48 VTAAHVADLFRAPVSPLDPATALAFF-ECVARRPGFRHTAASHAALLQLLARRRAPANYD 106
Query: 58 ---------SNRITEMKEVIDQMK------GDSCECKDSVFATAIRTYARAGQLNEAVSL 102
S +++E +D ++ G + A+R+ R L
Sbjct: 107 KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ +L Q + T ++NT++ K+ L AH F C E ++ + +L
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYF---CLLRESGMQMDTYTCNALLLG 223
Query: 163 QCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
CR SDL A + M GC + SY IL++GLC R + EA L++ M G
Sbjct: 224 YCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMV----HDG 279
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------KSRRHRIDL 268
++ Y L+ LC +G+I DA +L+++ +G+ KS R + L
Sbjct: 280 CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 339
Query: 269 ----------CPCND-----------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
C +D G ++ A+ L+N A+ RG P++ +++ +
Sbjct: 340 GIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYC 399
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
RI + +V M + L Y + L K + EA E + E G P V
Sbjct: 400 KAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG-LAPNV 458
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y ++ G C G A+ K M + GC N TYG L+ GL +D + +A ++
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
+M P V TY LI+G C +++ L EM+ Q L PD ++ L ++C
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCK-KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 186/441 (42%), Gaps = 12/441 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L + RI + + ++D+M + I Y ++G++ +A+ +
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ Q C ++N+L+ + EA +L G+ + + L++ C+
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGF--TPTVITFTNLINGYCK 400
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D AL V M C D ++Y +L+ L RL EA L MF G
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF----ANGLAP 456
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y +++ C G + A+++ + + +G P + + + + + A +L
Sbjct: 457 NVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCH-PNAWTYGSLIYGLIQDKKLHKAMAL 515
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I + G P + +Y+ + + ++ + M G P Y AL K
Sbjct: 516 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK 575
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +EA +V+ V T Y L+ G AGN+ A + ++KM + GC A+
Sbjct: 576 SGRAEEAYSF----LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADL 630
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY +L+ LC+ + EA +L++M + + Y ++I + GK A E
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690
Query: 464 MISQAKLPDISVWSSLVASVC 484
MIS P + ++ ++S C
Sbjct: 691 MISSGHKPSATTYTVFISSYC 711
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 158/386 (40%), Gaps = 38/386 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ + + +++AG + A L + + C +++ LL+ + K+ KL EA IL
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ G VK I + +++ + + + D A +F EM G P +Y + + C
Sbjct: 657 TVSG--VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK---------- 250
R+ EA HL+ M + G D+V Y + G I A L++
Sbjct: 715 RIEEAEHLIGEM----ERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNC 770
Query: 251 -----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L+ LK H +D + ++ L+ + G P++ +YS++
Sbjct: 771 WTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAG 830
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
R+ E +LD M K P+ +Y + + +A+ + + M++ F P
Sbjct: 831 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD-MIEFGFQP 889
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG-------ILVDGLCRDGR 418
+ Y+ L+ GLCD G+ A K + C G Y IL DGL + G
Sbjct: 890 QLESYHYLIVGLCDEGDYDRA--------KSLFCDLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVL 444
S++L M R E+Y++L
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSML 967
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 5/297 (1%)
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ T + ++ + Q+G D V Y T++ A C +G + A + + G++
Sbjct: 158 DMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTC 217
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + L C D+ A L+ + G + SY+ + L + E ++ M
Sbjct: 218 NALLLGYCRT-SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMV 276
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G +L Y + L K+G + +A +++E ++G VP+V YN ++ G C +G
Sbjct: 277 HDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGV-VPSVWTYNAMIDGYCKSGRM 335
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A + +K + +Q GC + TY L+ GLC G+ EA +L + R + P V T+
Sbjct: 336 KDA-LGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTN 393
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
LI G C + +A+ MIS D+ + L+ +V L ++TL ++
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI-NVLIKKCRLKEAKETLNEM 449
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S+I ++ R+ E ++D M G + ++ I+ +AVS ++
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDM 882
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+F +S++ L+ + E + A LF G + + +L D L +
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFC-DLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 167 SDLALHVFQEMDFQGCYPDRESYHIL 192
D + MD + C D ESY +L
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSML 967
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 229/499 (45%), Gaps = 53/499 (10%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
Q+S T LK F+ + P+ G + ++ +S E ++ G+ C
Sbjct: 4 QRSITTNLKAFRMVQ---PHLLKTGTLRTDLLCTISSFLSSCE-RDFSSITNGNVC---- 55
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQ-------------FNCVNWTQSFNTLLKEMVK 127
F +R+ + ++A++LF+ + + F+ + T+ FN +L + K
Sbjct: 56 --FRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVL-DFCK 112
Query: 128 ESKLEA-AHILFL------------RSCYGWEVKSRIQSL---------NLLMDVLCQCR 165
+ +L AH ++ ++C+ + V ++ L N L++ LC
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEG 172
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ + M GC PD +Y+ ++ G+C + T L + M ++ ++ D+
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR----SGDTSLAFDMLRKMEERNVKADV 228
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y T++ +LC G I A+ + +++ KG+K+ + + C G+ +GA L+
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLK 287
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + R +P++ +++ + EG++ E +++ EM T+G P+++ Y +
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ EA +++ MV+ P + + L+KG C + + +SK+ G VAN T
Sbjct: 348 RLSEANNMLDL-MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVT 405
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ILV G C+ G+ A + +EM+ P V TY +L+ GLC GK +A+ E++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 466 SQAKLPDISVWSSLVASVC 484
I ++++++ +C
Sbjct: 466 KSKMDLGIVMYTTIIEGMC 484
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 200/430 (46%), Gaps = 23/430 (5%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T I G++++AV L + + C ++N+++ + + A + LR
Sbjct: 159 TTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM-LR 217
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
VK+ + + + ++D LC+ D A+ +F+EM+ +G +Y+ L++GLC
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+ N+ LL M R +++ + LL +GK+Q+A ++ ++++ +G+ +P
Sbjct: 278 KWNDGALLLKDMVSR----EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPN 332
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + DG ++ S N L +R P + +++++ R+ +G
Sbjct: 333 IITYNTLM----DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
KV + +G + V Y + + G + A E+ +E MV +P V Y ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGILLDG 447
Query: 377 LCDAGNSAVAVMYLKKMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
LCD G A+ + + K +G V Y +++G+C+ G+ +A + + +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
P V TY V+I GLC G EA + L +M P+ +++L+ + DL
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTAS 562
Query: 494 RKTLEQLSSC 503
K +E++ SC
Sbjct: 563 AKLIEEMKSC 572
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE-------------CKDS------ 81
Y + + ++I L ++++ ++D+M + C+ C+
Sbjct: 154 YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 82 ----------------VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++T I + R G ++ A+SLFK + + ++N+L++ +
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K +L L+ E+ + + N+L+DV + + A +++EM +G P+
Sbjct: 274 CKAGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ D M
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ I ++GL A + C G+ I+ A+ L E + G +P + +Y +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 506
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 426 LEEM 429
+EEM
Sbjct: 566 IEEM 569
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 203/457 (44%), Gaps = 35/457 (7%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQ 108
+++ IL ++ M + I + + + F I +A AG+ +EAV F + +
Sbjct: 109 AVVPILLATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGE 168
Query: 109 FNCVNWTQSFNTLLKEMVKE-SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
F C T +N +L+ +V + A L+ R + +R + N+L+ LC+
Sbjct: 169 FGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNR-ATYNVLIHGLCKRGTP 227
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL +F EM +G P+ +++ IL+ +CN +L EA +LL+SM KG D V
Sbjct: 228 VDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSM----EDKGCPPDEVT 283
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRK-----GLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
Y L LC G++ +A++ LE + GLK + L G EG +
Sbjct: 284 YNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLA----GRYEEGFQC 339
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E L + + P + Y+ M GR + DEM+ KGF P Y L AL
Sbjct: 340 YM-EVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKAL 398
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G +D A ++ EMV+ V + Y ++ GLC A+ M +VGC
Sbjct: 399 CDAGDLDGARSLM-SEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMV-EVGCHP 456
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV--------------ETYNVLIRG 447
+ TY +L+DGL R R EA + +M + + P + ET L+
Sbjct: 457 SVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNN-PSLFLRLTLGANQVRDSETLQKLVES 515
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+C G+ +A L +I +PD+ +++L+ +C
Sbjct: 516 MCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLC 552
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 201/500 (40%), Gaps = 86/500 (17%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGD-SCECKDSVFATAIRTY-ARAGQLNEAVSLFKN 105
+ ++I + + R E E +M+G+ C V+ +R A G + A++L+
Sbjct: 142 FEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNR 201
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C+ ++N L+ + K A LF + +++ +L+ +C
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLF-DEMISRGITPNVKTHTILLSSMCNAG 260
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH------------------ 207
+ A ++ M+ +GC PD +Y+ + GLC R++EA
Sbjct: 261 QLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGY 320
Query: 208 --LLYSMFWR-------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
L+ +F + Q DIV+Y ++ + G+ DA +++
Sbjct: 321 SCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMK 380
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
KG P + + L D D++GA+SL++E + + + +Y+ M I L E +
Sbjct: 381 EKGF-TPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLV 439
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---------------------- 350
E +V D M G PS++ Y + L++ ++EA
Sbjct: 440 DEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLG 499
Query: 351 ---------LEVIEEEM----------------VKGTFVPTVRVYNILLKGLCDAGNSAV 385
L+ + E M + VP V YN LL GLC N
Sbjct: 500 ANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDG 559
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +++ + G + TYG L+D L R R+ +A + +++L P + YN ++
Sbjct: 560 ALRLFRELQVK-GFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMM 618
Query: 446 RGLCSIGKQYEAV-MWLEEM 464
R LC + K +A+ +W + +
Sbjct: 619 RSLCRMQKLSQAINLWFDHL 638
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 45/408 (11%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+PT + ++I Q PL A +IF A ++ PN+RH+ + +I L + +V+
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE- 128
+ + +F I+ YA A + +S F + +FN + N +L +V
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
L+ A LF +S V +S NLLM C +A +F +M + PD +S
Sbjct: 169 GYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y IL++G C ++N A LL M KG D + Y TLL +LC + ++++A ++L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDML----NKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++ KG CN P L Y+ M +
Sbjct: 284 CRMKLKG---------------CN---------------------PDLVHYNTMILGFCR 307
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
E R ++ KVLD+M + G P+ V Y + L GM DE + +EE + KG F P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFS 366
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
V N L+KG C G A ++ + K G + +T+ +++ +C +
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVEVVMKN-GETLHSDTWEMVIPLICNE 413
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
R L + +G +Q A ++ + G+ P +R + + + +D+ A L + L
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGV-MPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R +P + SY + +G++ ++LD+M KGF P + Y L +L + +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA +++ +KG P + YN ++ G C + A L M GC N +Y
Sbjct: 278 EAYKLLCRMKLKGC-NPDLVHYNTMILGFCREDRAMDARKVLDDMLSN-GCSPNSVSYRT 335
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GLC G F E + LEEM+ + + P N L++G CS GK EA +E ++
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 469 KLPDISVWSSLVASVC 484
+ W ++ +C
Sbjct: 396 ETLHSDTWEMVIPLIC 411
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D VL + R+ G+ + ++ L ++ + + E + +M++ F P + N +L
Sbjct: 104 DDVLAKHRSSGYPLTGEIF-TYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L L K S+ G + N +Y +L+ C + A ++ +ML R
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
P V++Y +LI+G C G+ A+ L++M+++ +PD +++L+ S+C T
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 214/481 (44%), Gaps = 60/481 (12%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P +++KK +P + ++ ++ K N RH+ Y + L ++ ++
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKL-NIRHSFWTYNLLTRSLCKAGLHDLAGQM 125
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ MK D + + + ++A G+L+ A +L L F N+LL +VK
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVK 183
Query: 128 ESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++E A LF +SC + ++ N+L+ LC +++ AL + M GC
Sbjct: 184 LDRVEDAMKLFDEHLRFQSC------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS--GEDIVIYRTLLFALCDQGK 240
PD +Y+ L++G C LN+A+ + ++ + GS D+V Y +++ C GK
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEM-----FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A +L+ +LR G+ P+ +++
Sbjct: 293 MREASSLLDDMLRLGI------------------------------------YPTNVTFN 316
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ G ++ +++ +M + G +P +V + + + + G V + + EE +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G F P Y+IL+ LC+ A L +++ + + Y ++DG C+ G+
Sbjct: 377 GMF-PNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVN 434
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ ++EEM + P T+ +LI G C G+ +EAV +M++ PD SSL+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 481 A 481
+
Sbjct: 495 S 495
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 43/377 (11%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ ++ + NLL LC+ DLA +F+ M G P+ L+ +L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR--------- 253
+ AT LL F +G ++ +LL L +++DAM++ ++ LR
Sbjct: 155 HFATALLLQSF---EVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 254 -----KGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLI---------NEA------LI 289
+GL ++L G DI +LI N+A +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 290 RGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G + P + +Y++M G++ E +LD+M G +P+ V + + K G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A E+ + + G F P V + L+ G C G + ++M+ + G N TY
Sbjct: 329 LTAEEIRGKMISFGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYS 386
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL++ LC + R L+A +L ++ + P YN +I G C GK EA + +EEM +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 468 AKLPDISVWSSLVASVC 484
PD ++ L+ C
Sbjct: 447 KCKPDKITFTILIIGHC 463
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 54/314 (17%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK-GDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y ++I +SN + + E+ +K G C + + I Y +AG++ EA SL +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 106 LSQFNCVNWTQSFNTLLK------EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + +FN L+ EM+ ++ I F C+ + + L+D
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF--GCF-----PDVVTFTSLID 355
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + +++EM+ +G +P+ +Y IL+ LCN+ RL +A LL +++ K
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL----GQLASK 411
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+Y ++ C GK+ +A I+E++ +K K
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK---------------------- 449
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
P +++ + I +GR+ E + +M G P + + L+
Sbjct: 450 --------------PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 340 ALFKDGMVDEALEV 353
L K GM EA +
Sbjct: 496 CLLKAGMAKEAYHL 509
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
FW Y +L K G+ D A ++ E G P R+ L+ + G A
Sbjct: 103 FW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGV-SPNNRLLGFLVSSFAEKGKLHFA 157
Query: 387 VMYLKKMSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
L + + GC V N L++ L + R +A ++ +E L +T+N+L
Sbjct: 158 TALLLQSFEVEGCCMVVNS-----LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
IRGLC +GK +A+ L M PDI +++L+ C + +LN + + + S S
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF-CKSNELNKASEMFKDVKSGS 271
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 11/402 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ IR G++ +A+SL ++ + C ++ LL+ M K S E A + L
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA-MAVLDE 202
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N++++ +C+ R D A + + GC PD SY L+KGLC +R
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKR 262
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++ L F + +K + V + L+ C G ++ A+Q+L+++ +
Sbjct: 263 WDDVEEL----FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G ++ A +N G P SY+ + L R + ++L E
Sbjct: 319 LCNIVINSICKQGR-VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M P+ V + + L + G++++A+ +IE+ G V V YN L+ G C G
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV-TYNALVNGFCVQG 436
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ + M C N TY L+ GLC R A+ ++ EML R P V T+
Sbjct: 437 HIDSALELFRSMP----CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
NVL+ C G EA+ +E+M+ P++ +++L +
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 187/435 (42%), Gaps = 11/435 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I +L + R+ + ++D M C+ + + + +A+++ +
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N ++ M +E +++ A L R + + + S L+ LC +R
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNR-LFSYGCQPDTVSYTTLLKGLCASKR 262
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D +F EM + C P+ ++ +L++ C + A +L M ++ +
Sbjct: 263 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM----TEHECATNTT 318
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ ++ ++C QG++ DA + L + G P + + L E AK L+ E
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCN-PDTISYTTVLKGLCRAERWNDAKELLKE 377
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P+ +++ L +G I + ++++M+ G +V Y A + G
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D ALE+ K P Y LL GLC+A A + +M + C N T+
Sbjct: 438 IDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDAAAELVAEMLHR-DCPPNVVTF 492
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+LV+ C+ G EA ++E+M+ P + TYN L G+ +A+ L ++S
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS 552
Query: 467 QAKLPDISVWSSLVA 481
+ PD+ +SS++
Sbjct: 553 KGVSPDVITFSSIIG 567
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 194/468 (41%), Gaps = 44/468 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ + +++ + V+D+M+ C + I R G++++A L L
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS-------------------CYGWEV 147
+ C T S+ TLLK + + + LF C G V
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 298
Query: 148 KSRIQSL---------------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ IQ L N++++ +C+ R D A M GC PD SY +
Sbjct: 299 ERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTV 358
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+KGLC R N+A LL M + + V + T + LC +G I+ A+ ++E++
Sbjct: 359 LKGLCRAERWNDAKELLKEMV----RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
G + + C G I+ A L + P+ +Y+ + L N R+
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGH-IDSALELFRSMPCK---PNTITYTTLLTGLCNAERL 470
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+++ EM + P++V + + + G +DEA+E++E+ M G P + YN
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC-TPNLITYNT 529
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L G+ +S A+ L + + G + T+ ++ L ++ R EA ++
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI 588
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P YN ++ GLC + A+ +L M+S +P+ S + L+
Sbjct: 589 GMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 200/494 (40%), Gaps = 77/494 (15%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L + + K A+ + E + K PN Y +I + R+ +
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV----TYNVIINGMCREGRVDD 230
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+++++++ C+ + T ++ + + ++ LF + + NC+ +F+ L++
Sbjct: 231 ARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 290
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ +E A I L+ E + N++++ +C+ R D A M GC
Sbjct: 291 FFCRGGMVERA-IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN 349
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSM------------------------------- 212
PD SY ++KGLC R N+A LL M
Sbjct: 350 PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++ + G +V Y L+ C QG I A+++ + K P + + L
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTTLLTGLC 465
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ E ++ A L+ E L R P++ +++ + +G + E +++++M G P+L+
Sbjct: 466 NAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLI 525
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKG------TFV---------------------- 364
Y + KD ++ALE++ + KG TF
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLA 585
Query: 365 ------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P VYN +L GLC A+ +L M GC+ N TY IL++GL R+G
Sbjct: 586 QDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSN-GCMPNESTYIILIEGLAREGL 644
Query: 419 FLEASRVLEEMLIR 432
EA +L + R
Sbjct: 645 LKEAQDLLSMLCSR 658
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 10/328 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC+ R+ A V + + G D +Y+ L+ G C L+ A L+ SM
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---- 136
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
D Y L+ LCD+G++ DA+ +L+ +LR+G + P + + L
Sbjct: 137 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ-PNVVTYTVLLEAMCKNSG 192
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A ++++E +G P++ +Y+ + + EGR+ + +L+ + + G P V Y
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L L D+ E+ E M K +P +++L++ C G A+ L++M++
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNC-MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
C N I+++ +C+ GR +A + L M P +Y +++GLC + +
Sbjct: 312 -ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWND 370
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A L+EM+ P+ +++ + +C
Sbjct: 371 AKELLKEMVRNNCPPNEVTFNTFICILC 398
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 275 EDIEGAKSLINEALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
ED+ GA L+ + R G P + + + +L GR + +VL G +
Sbjct: 53 EDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 112
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y +A + G +D A +I V P Y L++ LCD G A A+ L M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMPV----APDAYTYTPLIRVLCDRGRVADALSLLDDM 168
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ GC N TY +L++ +C++ F +A VL+EM + P + TYNV+I G+C G+
Sbjct: 169 LRR-GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A L + S PD +++L+ +C
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLC 258
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A ++E + P V + L++ LC G ++ A L+ ++ G + Y L
Sbjct: 58 AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGSPVDVFAYNTL 116
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
V G CR G A R++ M + P TY LIR LC G+ +A+ L++M+ +
Sbjct: 117 VAGYCRYGHLDAARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 173
Query: 470 LPDISVWSSLVASVCCNTA 488
P++ ++ L+ ++C N+
Sbjct: 174 QPNVVTYTVLLEAMCKNSG 192
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 9/369 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++++++K +VKE+K E ++ + L + + N +M + + A V+Q
Sbjct: 12 TYSSIIKSLVKEAKPEESYKV-LEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQH 70
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G PD SYHIL+ GL +L+E+ +L M R G + Y +L+ AL
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMR----GQTPSMQAYSSLVRALA 126
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
++ A + ++++R G + + + L C G+ ++ A + G P++
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGK-VKDASERFKQMPKHGCQPNV 185
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + L + G++ + + + EM++ P +V Y L A+ K V+E ++ E
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
G +VP V ++ L+ GLC G A+ M + GC N TY L+ GLCR
Sbjct: 246 MRAAG-YVPNVITFSTLIHGLCRTGELEKALEVFGSML-EAGCKPNKYTYTTLISGLCRA 303
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISV 475
+ ++A + E+M P YN LI G C G EA EM A L P I
Sbjct: 304 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVT 363
Query: 476 WSSLVASVC 484
+++L+ C
Sbjct: 364 FNTLIDGFC 372
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 206/478 (43%), Gaps = 19/478 (3%)
Query: 12 TYLSQIIK---KQKSPLTALKIFKEAKEKYPN---YRHNGPVYASMIGILSESNRITEMK 65
TY S IIK K+ P + K+ +E N + NG + + SN + + +
Sbjct: 12 TY-SSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQG-----FARSNNMEKAR 65
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV M + + + I A+ G+L+E++ + + Q++++L++ +
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +++ A LF G R+ L++ LCQ + A F++M GC P+
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILG-LCQAGKVKDASERFKQMPKHGCQPN 184
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y++L+ GLC+ +L +A ++F + D+V Y TLL A+C ++++
Sbjct: 185 VPVYNVLLHGLCSSGQLEQAN----TLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ E + G + C GE +E A + L G P+ +Y+ +
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGE-LEKALEVFGSMLEAGCKPNKYTYTTLISG 299
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L ++++ ++ ++M P V Y + +A K G +DEA ++ E P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
T+ +N L+ G C G A + +M + G A+ TY IL+ GL R + EA V
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTK-GLAADSCTYRILIAGLSRATKLDEALEV 418
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
++M + + + + GLC G +A E +P+ + L S+
Sbjct: 419 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 196/445 (44%), Gaps = 7/445 (1%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N N Y+S+I L + + E +V+++M C F ++ +AR+ + +A
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++++ + S++ L+ + K KL+ + + + S +Q+ + L+
Sbjct: 65 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPS-MQAYSSLVR 123
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + RR D A +F EM G +PDR ++ L+ GLC ++ +A+ F ++ +
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASE----RFKQMPKH 179
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G ++ +Y LL LC G+++ A + + ++ +P + L +E
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAE-MKSHSCSPDVVTYNTLLDAVCKARRVEE 238
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
L G +P++ ++S + L G + + +V M G P+ Y ++
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L + V +A E+ E+ M + P YN L+ G C G+ A ++MS G
Sbjct: 299 GLCRAEKVIQARELFEK-MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
T+ L+DG C+ G+ A+ ++ EM + TY +LI GL K EA+
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
++M + L D S V +C
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLC 442
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 7/284 (2%)
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
K ++ Y +++ +L + K +++ ++LE+++ G P + ++E
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCN-PDVFAFNGVMQGFARSNNME 62
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ + + G P SY + L G++ E K+L EM +G PS+ Y + +
Sbjct: 63 KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL K VD A + +E M++G P ++ L+ GLC AG A K+M K G
Sbjct: 123 RALAKARRVDHASSLFDE-MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH-G 180
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C N Y +L+ GLC G+ +A+ + EM S P V TYN L+ +C + E
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
E M + +P++ +S+L+ + C T +L K LE S
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGL-CRTGELE---KALEVFGS 280
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K + K+F+ + Y N ++++I L + + +
Sbjct: 218 PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA--GYVPNVITFSTLIHGLCRTGELEKAL 275
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV M C+ + T I RA ++ +A LF+ ++Q ++N+L+
Sbjct: 276 EVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 335
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K ++ A L+ G ++ I + N L+D C+ + A + EM +G D
Sbjct: 336 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 395
Query: 186 RESYHILMKGLCNDRRLNEATHLL-------------------------------YSMFW 214
+Y IL+ GL +L+EA + Y++F
Sbjct: 396 SCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 455
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ G+ + +R L +L G+++DA +++E
Sbjct: 456 ATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 237/530 (44%), Gaps = 61/530 (11%)
Query: 9 LTPTYLSQ-IIKKQKSPLTALKIFKEAKEKYPNYRH---------NGPVYASMIGILSE- 57
LTP+ +SQ ++ +SP L K + R P + +L +
Sbjct: 64 LTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQA 123
Query: 58 -----SNRITEMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+N I E+ E + + D K S VF I++ + +EA F + +
Sbjct: 124 LGGGTTNSIREIFEFLAASR-DRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGV 182
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+ ++ N+LL +K ++ EAA +L+ + +KS + + N++++VLC+ + A
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAE-MFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
M+ G P+ +Y+ ++ G C+ R+ A +L +M ++ D Y +L
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM----KRQKIEPDSFTYGSL 297
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ +C QG++++A +I E++++KGL+ + + CN G +++ A + +E L +G
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG-NLDMASAYKDEMLKKG 356
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE-----------AKLAA 340
P++++Y+++ L+ E R E + ++ E++ KG P + Y AK A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 341 LFKDGMV------------------------DEALEVIEEEMVKGTFVPTVRVYNILLKG 376
L D M+ EA ++ ++ +G +P ++N L+ G
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV-LPDAIMFNALIDG 475
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C N A LK M + + + T+ ++ G CR+G+ EA + +EM R P
Sbjct: 476 HCSNSNVKGAFELLKDMDR-MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++N LI G G +A EM+ P + +++LV +C N
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 7/334 (2%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+ L+ C R+D A F M +G P E+ + L+ R EA +LY+
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNR-TEAAWVLYAEM 212
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+R+ K S + + ++ LC +GK++ A + + G+K + I C+
Sbjct: 213 FRLRIKSS---VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G +E A +++ + P +Y ++ + +GR+ E K+ +EM KG PS V+
Sbjct: 270 GR-VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + G +D A ++EM+K PT+ YN L+ L + A +K++
Sbjct: 329 YNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G + TY IL++G CR +A + +EML P +TY L+ L +
Sbjct: 388 QEK-GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
EA +++ S+ LPD ++++L+ C N+
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGHCSNS 480
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 10/403 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI +L + ++ + K+ + M+ + + T + Y +G++ A ++ + +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ ++ +L+ M K+ +LE A +F ++ N L+D C D+A
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIF-EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
EM +G P +Y+ L+ L ++R +EA M I +KG D + Y
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE----CMIKEIQEKGISPDAITYNI 401
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C + A + +++L G+K P + + L + ++ A L +
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIK-PTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G +P ++A+ ID + V+G ++L +M P V + + ++G V+E
Sbjct: 461 GVLPDAIMFNAL-IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+ +E +G P +N L+ G G+ A +M G TY L
Sbjct: 520 ARELFDEMKRRG-IKPDHISFNTLISGYSRRGDIKDAFRVRNEML-DTGFNPTVLTYNAL 577
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
V GLC++ A +L+EM+ + P TY LI G+ +
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 142/336 (42%), Gaps = 37/336 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + + R+ E ++ ++M ++ T I + G L+ A + +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N+L+ + E + + A + ++ + + N+L++ C+C
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECM-IKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS-----------MFWR 215
+ A + EM G P +++Y L+ L R+ EA L MF
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471
Query: 216 I--------SQKGSGE------------DIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ + KG+ E D V + T++ C +GK+++A ++ +++ R+G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL--YNEGRIV 313
+K P + + DI+ A + NE L G P++ +Y+A+ L EG +
Sbjct: 532 IK-PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
E ++L EM +KG P Y + + K + DE
Sbjct: 591 E--ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 206/472 (43%), Gaps = 50/472 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL+ A+++ +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + N+LL +++ A + + + + L+ L Q ++
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEA-VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV 226
A+ + + M +GC PD +Y ++ GLC + A +LL M +KG E D+V
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-----EKGKIEADVV 251
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
IY T++ LC + DA + K+ KG+K + + C CN G A L+++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR-WSDASRLLSD 310
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
L + P L ++A+ EG++VE +K+ DEM ++K +P +V Y + K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 346 MVDEALEVIEE----------------------------------EMVKGTFVPTVRVYN 371
V+E +EV E +MV P + YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 372 ILLKGLCDAGNSAVAVM---YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
ILL GLC+ GN A++ Y++K ++ V TY +++ LC+ G+ + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIV----TYTTMIEALCKAGKVEDGWDLFCS 486
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++ P V TY ++ G C G + EA EM LP+ +++L+
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 168/409 (41%), Gaps = 52/409 (12%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---L 139
F+ + A+ + + +SL + + + +++ + + S+L A + +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ YG I +LN L++ C R A+ + +M G PD ++ L+ GL
Sbjct: 138 KLGYG----PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ +EA L+ R+ KG D+V Y ++ LC +G+ A+ +L K+ + ++A
Sbjct: 194 NKASEAVALV----ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 260 KSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ I LC +D A L N+ +G P + +Y+ + L N GR + +
Sbjct: 250 VVIYNTIIDGLCKYKHMDD---AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L +M K P LV + A + A K+G + EA E + +EMVK
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA-EKLYDEMVK----------------- 348
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
SK C + Y L+ G C+ R E V EM R
Sbjct: 349 ----------------SKH--CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G A M ++M+S PDI ++ L+ +C N
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 222/505 (43%), Gaps = 73/505 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++I L +R E +++ +M + C V F T I + + G++++A +LF
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAH--------------------ILFLRSCYG- 144
+ Q V ++N+++ + K ++ A I+ SC G
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317
Query: 145 WEVKSRI-------------QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
W+ +++ + + M LC+ RS A +FQ M +G PD SY I
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377
Query: 192 LMKGLCNDRRLNEATHLLYSM-------------------------------FWRISQKG 220
L+ G + R + +L +SM F + +G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y TL+ A C G++ DAM+ +++ G++ + H + C G D+ A
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG-DLVKA 496
Query: 281 KSLINEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
K I+E + +G P++ +S++ L EGR+++ V + + G P++V + + +
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLID 556
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVG 398
G +++A V++ MV P V N L+ G C +G ++ ++M K+V
Sbjct: 557 GYCLVGKMEKAFGVLDA-MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
TY I++DGL R GR A ++ EM+ ++TY +L++GLC EA+
Sbjct: 616 --PTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 673
Query: 459 MWLEEMISQAKLPDISVWSSLVASV 483
++ + DI++ ++++ ++
Sbjct: 674 TLFHKLGAMDCKFDITILNTMINAL 698
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 18/437 (4%)
Query: 55 LSESNRITEMKEVI-DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNC 111
L + R E +V+ +M SC + T I++ + EA+ + + +++ C
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
SFNT++ K+ ++ A LF V + + N ++D LC+ R D A
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLF-NEMVQKGVVPDVGTYNSIVDALCKARAMDKAE 287
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V ++M +G PD +Y+ ++ G E+ MF +++ KG D V + +
Sbjct: 288 FVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESA----KMFRKMTSKGLIPDTVTFSSF 343
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN---EAL 288
+ +LC G+ +DA +I + + KG P + I L G EG + +N ++
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKG-HMPDIVSYSILL----HGYATEGRFADMNNLFHSM 398
Query: 289 IRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
GI S + I + G + E V EM+ +G P++V Y ++A + G +
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A+E +M+ P VY+ L+ G C G+ A ++ +M + N +
Sbjct: 459 ADAMEKF-SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFS 517
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ LC +GR ++A V ++ P + T+N LI G C +GK +A L+ M+S
Sbjct: 518 SIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV 577
Query: 468 AKLPDISVWSSLVASVC 484
PD+ ++LV+ C
Sbjct: 578 GIEPDVVTNNTLVSGYC 594
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 185/452 (40%), Gaps = 40/452 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
++S + L + R + +E+ M ++ + YA G+ + +LF ++
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V+ N L+ K ++ A ++F G V+ + + + L+ C+ R
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTE-MQGQGVRPNVVTYSTLISAFCRMGR 457
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ F +M G P+ YH L+ G C L +A + M +S+ +IV
Sbjct: 458 LADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM---MSKGLHRPNIV 514
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +++ +LC +G++ DA + ++ G + + + C G+ +E A +++
Sbjct: 515 FFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK-MEKAFGVLDA 573
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P + + + + G+I +G + EM K P+ V Y L L + G
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAVAVMY--------------- 389
A ++ E + GT V + Y ILLKGLC D + A+ + +
Sbjct: 634 TSAAKKMFHEMIDSGTAV-DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692
Query: 390 -----LKKMSKQ------------VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L K+ ++ G V N TYG+++ L ++G EA + M
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
P N +IR L G +A ++ ++
Sbjct: 753 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 784
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 153/369 (41%), Gaps = 74/369 (20%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+++ +LMD C+ RR DL + G +K LC+ +R +EA +L
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL- 182
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
R+S+ D + Y T++ +LC + Q+A+ +++++ ++G +
Sbjct: 183 --LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR------------- 227
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ P + S++ + + +G + + + +EM KG P
Sbjct: 228 CS---------------------PDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPD 266
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + + AL K +D+A E + +MV P YN ++ G +G+ +
Sbjct: 267 VGTYNSIVDALCKARAMDKA-EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMF 325
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+KM+ + G + + T+ + LC+ GR +A + + M + + P + +Y++L+ G +
Sbjct: 326 RKMTSK-GLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384
Query: 451 IGK-----------------------------------QYEAVMWLEEMISQAKLPDISV 475
G+ EA++ EM Q P++
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444
Query: 476 WSSLVASVC 484
+S+L+++ C
Sbjct: 445 YSTLISAFC 453
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 41/310 (13%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R N ++S+I L R+ + ++V + + F + I Y G++ +A
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ + + NTL+ K K++ ILF R +VK + N+++D
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILF-REMLHKKVKPTTVTYNIVLDG 627
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L + R+ A +F EM G D ++Y IL+KGLC + +EA ++F ++
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI----TLFHKLGAMD 683
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
DI I T++ AL + ++A + I GL
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGL------------------------ 719
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+P++++Y M +L EG + E D + M G PS + +
Sbjct: 720 ------------VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 767
Query: 341 LFKDGMVDEA 350
L + G + +A
Sbjct: 768 LLQKGDIVKA 777
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGET 405
DEA++V+ M + + VP YN ++K LC S A+ +++M+K+ G C + +
Sbjct: 175 TDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS 234
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ ++ G + G +A + EM+ + P V TYN ++ LC +A L +M+
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294
Query: 466 SQAKLPDISVWSSLVASVCCN 486
+ PD +++++ C+
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCS 315
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 220/498 (44%), Gaps = 40/498 (8%)
Query: 6 PRLLTPTYLSQII-----KKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
PR+L+PT + I + P L F + + + + ++++ L E+ R
Sbjct: 101 PRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKT--GLGIDTIMISNLLRGLCEAKR 158
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYA-----RAGQLNEAVSLFKNLSQFNCVNWT 115
E +++ + C VF+ I + ++GQ +E + + C+
Sbjct: 159 TAEALDILLH-RMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV-CLPNA 216
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
++NT++ KE + A LF + + + N +++ LC+ R D A + +
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLF-NEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILR 275
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+M +G PD +Y+ L+ G + + EA + M + +G D+V +L+ +L
Sbjct: 276 QMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM----TSQGILPDVVTLNSLMASL 331
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA----KSLINEALIRG 291
C GKI+DA + + + KG K ++I L +G +G L N L G
Sbjct: 332 CKHGKIKDARDVFDSMAMKGQKT-DIFSYKIML----NGYATKGCLVDLTELFNLMLSDG 386
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P ++ + G + + +EMR +G P +V Y +AAL + G +D+A+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-----SAVAVMYLKKMSKQVGCVANGETY 406
E + + +G P++ Y+ L++G C G+ V M K M +GC +
Sbjct: 447 EKFNQMIDQGV-APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC------F 499
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+++ LC+ GR ++A + + + P V YN L+ G C +GK A+ + M+S
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559
Query: 467 QAKLPDISVWSSLVASVC 484
P++ V+ +LV C
Sbjct: 560 AGIQPNVVVYGTLVNGYC 577
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 209/476 (43%), Gaps = 51/476 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L ++ + + + ++ QM + + + I Y+ GQ EAV + K +
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL----C 162
+ + + N+L+ + K K++ A +F + K+ I S ++++ C
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQ-KTDIFSYKIMLNGYATKGC 371
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
++L F M G PD +++L+K L+ AT +F + ++G
Sbjct: 372 LVDLTEL----FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRAT----IIFNEMREQGVE 423
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+V Y T++ ALC GK+ DA++ +++ +G+ S H + C G D+ AK
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG-DLLKAKD 482
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD-------------------------- 316
L+ + + +G P + ++ + +L GR+++
Sbjct: 483 LVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYC 542
Query: 317 ---------KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+V D M + G P++V+Y + K G +DE L + E + KG P+
Sbjct: 543 LVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG-IKPST 601
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+YNI+L GL AG + A + +M++ G + TY I++ GL ++ EA + +
Sbjct: 602 TLYNIILHGLFQAGRTVPAKVKFHEMTES-GIAMDRYTYSIVLGGLFKNSCSDEAILLFK 660
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
E+ + + T N++I G+ I + EA + +P + +S ++ ++
Sbjct: 661 ELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 162/411 (39%), Gaps = 35/411 (8%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
S++ L + +I + ++V D M + + + YA G L + LF +
Sbjct: 326 SLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD 385
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ FN L+K K L+ A I+F V+ + + + ++ LC+ + D
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIF-NEMREQGVEPDVVTYSTVIAALCRIGKMDD 444
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------------- 212
A+ F +M QG P +YH L++G C L +A L+ M
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504
Query: 213 --------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
F G ++++Y TL+ C GK+++A+++ + ++ G++
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ C G EG SL E L +G PS Y+ + L+ GR V
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGL-SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
EM G Y L LFK+ DEA+ + +E + + NI++ G+
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKI-DITTLNIMIAGMF 682
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
A +S+ G V + TY I++ L ++G EA + M
Sbjct: 683 QIRRVEEAKDLFASISRS-GLVPSVVTYSIMMTNLIKEGLVEEADDMFSSM 732
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 161/397 (40%), Gaps = 48/397 (12%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+ ++M+ E ++T I R G++++AV F + +++ L++
Sbjct: 413 IFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFC 472
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
L A L L+ ++ I N +++ LC+ R A ++F G +P+
Sbjct: 473 THGDLLKAKDLVLQ-MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNV 531
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y+ LM G C ++ A + F + G ++V+Y TL+ C G+I + +
Sbjct: 532 MVYNTLMDGYCLVGKMENALRV----FDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE-------------ALIRGGI 293
+ +IL KG+K P + + I L AK +E +++ GG+
Sbjct: 588 LFREILHKGIK-PSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646
Query: 294 ----------------------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ + + M ++ R+ E + + G PS+
Sbjct: 647 FKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSV 706
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + L K+G+V+EA ++ G P ++ N +++ L + A YL
Sbjct: 707 VTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLS 766
Query: 392 KMSKQVGCVANGETYGILVD-----GLCRDG-RFLEA 422
K+ ++ + + T +L+D G CR+ RFL A
Sbjct: 767 KIDERSFSLDHSTTT-LLIDLFSSKGTCREHIRFLPA 802
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 220/502 (43%), Gaps = 63/502 (12%)
Query: 31 FKEAKEKYPNYRHNG-----PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EAK + + NG Y M+ S++ ++ E E++ M + CE V +
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I T +AG+++EA +F L ++NTL+ + KE +++ A LF S G
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF-ASMTGN 608
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ N ++D LC+ DLAL + +M C PD +++ ++ GL ++R+++A
Sbjct: 609 GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDA 668
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L + M +K D V TLL + G ++DA +I E + + L RR
Sbjct: 669 IWLFHQM-----KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHR-LGVYVDRRFW 722
Query: 266 IDLCP-----------------------CNDGEDI--------EGAKSLINEAL-IR--- 290
DL C DG + + ++L+ +++ IR
Sbjct: 723 EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK 782
Query: 291 --GGIPSLASYSAMAIDLYNEGRI-VEGDK----VLDEMRTKGFWPSLVMYEAKLAALFK 343
G P+L SY+ + EG + V D+ + EM+ G P + Y L A K
Sbjct: 783 ELGVKPTLESYNFLI-----EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGK 837
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVAN 402
G ++E E + E+M+ + P +NI++ L + + A+ ++ +S
Sbjct: 838 SGKINELFE-LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TYG L+DGL + GR EA + EEM+ P YN+LI G G A +
Sbjct: 897 --TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M+ + PD+ ++SLV +C
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLC 976
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 193/472 (40%), Gaps = 43/472 (9%)
Query: 50 SMIGILSESNRITE-MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
S + + + R TE +K ++++M+ + + IR RAG+++EA + K +
Sbjct: 233 SALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ L+ + KL+ A LF++ R+ + +L D C
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML-DKFSDCGDLG 351
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+ EM+ G PD ++ IL+ LC ++EA HLL M ++G ++ Y
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM----RKQGVLPNLHTY 407
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ L ++ DA+ + + G+ P + + + + + A +
Sbjct: 408 NTLISGLLRVNRLDDALDLFNNMETLGV-VPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
IRG P++ + +A L GR+ E + + +++ G P V Y + K G VD
Sbjct: 467 IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 349 EALEVIEE----------------------------------EMVKGTFVPTVRVYNILL 374
EA+E++ + + PTV YN L+
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GL G A+ M+ GC N T+ ++D LC++ A ++L +M +
Sbjct: 587 AGLGKEGQVQRAMELFASMTGN-GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNC 645
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P V T+N +I GL I K+ +WL + + PD +L+ V N
Sbjct: 646 MPDVLTFNTIIHGLV-IEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKN 696
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 8/325 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++ VLC+ +++ +A VF + G P ESY+ L++G + +++F
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN----DEMAWNLFTE 815
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ G D+ Y LL A GKI + ++ E+++ K P + H I +
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK-PNTITHNIIIANLVKSN 874
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A L + + P+ +Y + L GR+ E ++ +EM G P+ +Y
Sbjct: 875 SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ K G V+ A E+ + MV+ P ++ Y L+ LC+AG A+ Y +K+ K
Sbjct: 935 ILINGFGKTGDVNTACELFKR-MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKL-K 992
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
Q G + Y +++DGL R R EA + +EM R P + TYN LI L G
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052
Query: 456 EAVMWLEEMISQAKLPDISVWSSLV 480
+A EE+ P++ +++L+
Sbjct: 1053 QAGKLYEELQFIGLEPNVFTYNALI 1077
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 194/479 (40%), Gaps = 47/479 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + A+++F K K +++ + Y +M+ S+ + +K
Sbjct: 297 PDVVTYTVLIDALCTAGKLDDAMELF--VKMKASSHKPDRVTYITMLDKFSDCGDLGRVK 354
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E +M+ D F + +AG ++EA L + + + ++NTL+ +
Sbjct: 355 EFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++ ++L+ A LF + V + L +D + RSD AL F++M +G P+
Sbjct: 415 LRVNRLDDALDLF-NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ + + L RL EA +F R+ G D V Y ++ G++ +A+
Sbjct: 474 IVACNASLYSLAEMGRLREAK----VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAI 529
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L D+ DI SLIN
Sbjct: 530 ELLS-----------------DMSENQCEPDIIVINSLINT------------------- 553
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
LY GR+ E K+ ++ P++V Y +A L K+G V A+E+ M P
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF-ASMTGNGCPP 612
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+N +L LC +A+ L KM+ + C+ + T+ ++ GL + R +A +
Sbjct: 613 NTITFNTILDCLCKNDEVDLALKMLYKMT-TMNCMPDVLTFNTIIHGLVIEKRVSDAIWL 671
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASV 483
+M CV T L+ G+ G +A E+ + + + D W L+ +
Sbjct: 672 FHQMKKMLTPDCV-TLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI 729
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 7/320 (2%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ N ++++L RR + VF M Q D +Y I+ KGL L +
Sbjct: 125 ETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPF---- 180
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F ++ + G + Y L+ L G ++A+++ +++ +GLK P + +
Sbjct: 181 AFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLK-PSLKTFSALMVAT 239
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D E KSL+ E G P++ +Y+ L GRI E +++ M G P +
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + AL G +D+A+E+ +M + P Y +L D G+ +
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELF-VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWS 358
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M G + T+ ILV+ LC+ G EA +L+ M + P + TYN LI GL +
Sbjct: 359 EMEAD-GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417
Query: 452 GKQYEAVMWLEEMISQAKLP 471
+ +A+ M + +P
Sbjct: 418 NRLDDALDLFNNMETLGVVP 437
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + + K S AL +F + ++ Y ++ L +S R+ E K
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSG--DFSPTPCTYGPLLDGLLKSGRLEEAK 915
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ ++M C ++++ I + + G +N A LFK M
Sbjct: 916 ELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK-------------------RM 956
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+E ++ ++S L+ LC+ R D ALH F+++ G Y D
Sbjct: 957 VREG-----------------IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLD 999
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y++++ GL R+ EA +++ + +G D+ Y +L+ L G ++ A
Sbjct: 1000 SIAYNLMIDGLGRSHRIEEA----LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055
Query: 246 QILEKILRKGLK 257
++ E++ GL+
Sbjct: 1056 KLYEELQFIGLE 1067
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
L +Y + L+ G + + +MR GF + Y + L + G+ EALE+
Sbjct: 159 LNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYR 218
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+++G P+++ ++ L+ ++ L++M + +G N TY I + L R
Sbjct: 219 RMVLEG-LKPSLKTFSALMVATGKRRDTETVKSLLEEM-ESLGLKPNIYTYTICIRVLGR 276
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR EA R+++ M P V TY VLI LC+ GK +A+ +M + + PD
Sbjct: 277 AGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVT 336
Query: 476 WSSLV 480
+ +++
Sbjct: 337 YITML 341
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 37/221 (16%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SY+ + L G E ++ M +G PSL + A + A K E ++ + EE
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDT-ETVKSLLEE 254
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M P + Y I ++ L AG A +K+M GC + TY +L+D LC G
Sbjct: 255 MESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDD-GCGPDVVTYTVLIDALCTAG 313
Query: 418 RFLEA--------------------------------SRVLE---EMLIRSYWPCVETYN 442
+ +A RV E EM Y P V T+
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L+ LC G EA L+ M Q LP++ +++L++ +
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 214/481 (44%), Gaps = 60/481 (12%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P +++KK +P + ++ ++ K N RH+ Y + L ++ ++
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKL-NIRHSFWTYNLLTRSLCKAGLHDLAGQM 125
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ MK D + + + ++A G+L+ A +L L F N+LL +VK
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVK 183
Query: 128 ESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++E A LF +SC + ++ N+L+ LC +++ AL + M GC
Sbjct: 184 LDRVEDAMKLFDEHLRFQSC------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS--GEDIVIYRTLLFALCDQGK 240
PD +Y+ L++G C LN+A+ + ++ + GS D+V Y +++ C GK
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEM-----FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A +L+ +LR G+ P+ +++
Sbjct: 293 MREASSLLDDMLRLGI------------------------------------YPTNVTFN 316
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ G ++ +++ +M + G +P +V + + + + G V + + EE +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G F P Y+IL+ LC+ A L +++ + + Y ++DG C+ G+
Sbjct: 377 GMF-PNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVN 434
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ ++EEM + P T+ +LI G C G+ +EAV +M++ PD SSL+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 481 A 481
+
Sbjct: 495 S 495
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 43/377 (11%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ ++ + NLL LC+ DLA +F+ M G P+ L+ +L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR--------- 253
+ AT LL F +G ++ +LL L +++DAM++ ++ LR
Sbjct: 155 HFATALLLQSF---EVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 254 -----KGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLI---------NEA------LI 289
+GL ++L G DI +LI N+A +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 290 RGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G + P + +Y++M G++ E +LD+M G +P+ V + + K G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A E+ + + G F P V + L+ G C G + ++M+ + G N TY
Sbjct: 329 LTAEEIRGKMISFGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYS 386
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL++ LC + R L+A +L ++ + P YN +I G C GK EA + +EEM +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 468 AKLPDISVWSSLVASVC 484
PD ++ L+ C
Sbjct: 447 KCKPDKITFTILIIGHC 463
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 20/300 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK-GDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y ++I +SN + + E+ +K G C + + I Y +AG++ EA SL +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 106 LSQFNCVNWTQSFNTLLK------EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + +FN L+ EM+ ++ I F C+ + + L+D
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF--GCF-----PDVVTFTSLID 355
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + +++EM+ +G +P+ +Y IL+ LCN+ RL +A LL +++ K
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL----GQLASK 411
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+Y ++ C GK+ +A I+E++ +K K K + + C G E
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE- 470
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S+ ++ + G P + S++ L G E L+++ KG ++V E K A
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLETKTA 529
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
FW Y +L K G+ D A ++ E G P R+ L+ + G A
Sbjct: 103 FW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGV-SPNNRLLGFLVSSFAEKGKLHFA 157
Query: 387 VMYLKKMSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
L + + GC V N L++ L + R +A ++ +E L +T+N+L
Sbjct: 158 TALLLQSFEVEGCCMVVNS-----LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
IRGLC +GK +A+ L M PDI +++L+ C + +LN + + + S S
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF-CKSNELNKASEMFKDVKSGS 271
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 189/438 (43%), Gaps = 47/438 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +IG L + R+ + +++ D+M + T I Y + GQL EA
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA------- 271
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
FN ++E +K +E I F N L++ LC+ +
Sbjct: 272 -----------FN--IRERMKVENVEPTIITF----------------NSLLNGLCRAQM 302
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A V +EM+ G PDR +Y L G ++ + L + G I+
Sbjct: 303 MEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK------GVQIL 356
Query: 227 IY--RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
Y LL ALC +G ++ A ++L+K L GL + I C G DI A + I
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVG-DINKAYTTI 415
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ G P+ +Y+++ + E +K + +M KG P++ Y + +
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ D +++EE M K P V Y L+ LC N A + L M + G V N +
Sbjct: 476 CLFDRCFQILEE-MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR-GVVPNAQ 533
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y +L+DG C G+ +A R +EM+ R P + TYN+LI GLC GK EA E+
Sbjct: 534 IYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI 593
Query: 465 ISQAKLPDISVWSSLVAS 482
+ D+ ++SL++
Sbjct: 594 TRKGLSFDVITYNSLISG 611
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 11/402 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T + Y + G +N+A + + + ++N+L+K+ + +E A ++
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC-IKKM 453
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V +++ N L+D + D + +EM+ +G P+ SY L+ LC D +
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA +L M R G + IY L+ C GK++DA + ++++ + + P
Sbjct: 514 LEAEVILGDMVHR----GVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI-VPTLV 568
Query: 263 RHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ I + C G+ +E A++L +E +G + +Y+++ + G + + ++ +
Sbjct: 569 TYNILINGLCKKGKVME-AENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ G P+L Y +A K+G+V +E I +EM++ VP +YN L+ + G
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCGKEGLV--LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHG 685
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A M Q G + TY L+ G ++GR + ++ +M IR P ETY
Sbjct: 686 DVQKACSLHSAMEAQ-GIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
++LI G C + A +W EM P +S+ +L+ +
Sbjct: 745 DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGL 786
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 219/492 (44%), Gaps = 25/492 (5%)
Query: 10 TPTYLSQIIKKQKSPLTAL------------KIFKEAKEKYPNYRHNG--PVYASM---I 52
+P++L + +P+ L K+ E+ E Y + +G P AS+ +
Sbjct: 95 SPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFL 154
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCV 112
L + R + ++ ++ ++ AI+ + G L A+ L + +
Sbjct: 155 ESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVS 214
Query: 113 NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
+N ++ + KE +++ A LF +RI + N L+D C+ + + A +
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI-TYNTLIDGYCKVGQLEEAFN 273
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ + M + P +++ L+ GLC + + EA +L M G D Y TL
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM----EVYGFVPDRFTYTTLF 329
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
G + ++ + E+ +RKG++ + C +G ++E A+ ++ + L G
Sbjct: 330 DGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEG-NMEKAEEVLKKFLENGL 388
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P ++ + G I + +++M G P+ V Y + + + ++EA +
Sbjct: 389 APVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEK 448
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
I++ MV+ +P V YN L+ G + L++M K+ G N +YG L++
Sbjct: 449 CIKK-MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK-GLKPNVISYGCLINC 506
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+D LEA +L +M+ R P + YN+LI G C GK +A + +EM+++ +P
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566
Query: 473 ISVWSSLVASVC 484
+ ++ L+ +C
Sbjct: 567 LVTYNILINGLC 578
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 147/321 (45%), Gaps = 11/321 (3%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P + + ++ +C++ ++ + LY + + + G + L +L + +D
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYML---MKKDGVLPSVASLNLFLESLVSTKRYED 165
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAM 302
+Q+ +I+ GL+ + + G D++ A L+ + RGG+ P + Y+ +
Sbjct: 166 TLQLFSEIVESGLRPDQFMYGKAIQAAVKLG-DLKRAIELMT-CMKRGGVSPGVFVYNVV 223
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L E R+ + +K+ DEM + P+ + Y + K G ++EA I E M
Sbjct: 224 IGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN-IRERMKVEN 282
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
PT+ +N LL GLC A A L++M + G V + TY L DG + G ++A
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEM-EVYGFVPDRFTYTTLFDGHLKCGN-VDA 340
Query: 423 SRVLEEMLIRSYWPCVE-TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
S L E +R ++ T ++L+ LC G +A L++ + P + V+ + +
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP-VGVFFNTIV 399
Query: 482 SVCCNTADLNVCRKTLEQLSS 502
+ C D+N T+E++ +
Sbjct: 400 NGYCQVGDINKAYTTIEKMEA 420
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 35/422 (8%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTY--ARAGQLNEAVSLFKNLSQFNCVNWTQ 116
N+++E +I +MK SC ++ + T + R+G+ ++++ L + V
Sbjct: 206 NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQI 265
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++NT++ +E ++E A F K + + N+L+ LC D AL +F
Sbjct: 266 TYNTIIHGYCREGQVEKA-FQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 324
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
+G D +Y+ ++ GLC + R EA LL M +K G D Y +L AL
Sbjct: 325 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM----EEKKLGPDCYTYNAILCALA 380
Query: 237 D-QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DGEDIEG----AKSLINEAL 288
D +G+++ A Q K++ K K DL CN G EG A L N +
Sbjct: 381 DAEGQVEKAFQFRNKMVEKSFKP--------DLFTCNILLRGLCTEGMLDNALKLFNTWI 432
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMV 347
+G +Y+ + L EGR E +L EM K G P Y + ++G V
Sbjct: 433 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQV 492
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV--GCVANGET 405
++A + +MV+ +F P + NILL+GLC G + V LK + + G + T
Sbjct: 493 EKAFQ-FRNKMVEKSFKPDLFTCNILLRGLCREG---MLVKALKLFNTWISKGKAIDAVT 548
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ GLC++GRF EA +L EM + P TYN ++ L G+ M EE +
Sbjct: 549 YNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGR-----MEAEEFM 603
Query: 466 SQ 467
S+
Sbjct: 604 SK 605
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 184/405 (45%), Gaps = 42/405 (10%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
++F I+ + +L+EA+ L + F+C S+NT+L +
Sbjct: 194 AIFTNVIK-FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVL--------------- 237
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
W LC+ ++D ++ E+ G P + +Y+ ++ G C +
Sbjct: 238 ----W---------------LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREG 278
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ +A + ++ +K D+ LL LC +G + +A+++ + KG
Sbjct: 279 QVEKA----FQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 334
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN-EGRIVEGDKVL 319
+ I C +G E A L+ E + P +Y+A+ L + EG++ + +
Sbjct: 335 VTYNTIISGLCKEGR-FEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
++M K F P L L L +GM+D AL++ + KG + V YN ++ GLC
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV-TYNTIISGLCK 452
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G A L +M ++ G V + TY ++ G CR+G+ +A + +M+ +S+ P +
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF 512
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T N+L+RGLC G +A+ IS+ K D ++++++ +C
Sbjct: 513 TCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLC 557
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 205/468 (43%), Gaps = 82/468 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + P AL +F + ++ ++H+ P Y++++ L+ S ++ ++D ++ +
Sbjct: 388 LKSVQDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIR 445
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++++F I+ Y ++ +A+ LF+ + FNC SFNTLL
Sbjct: 446 CRETLFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLL--------------- 490
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+VL + R A+ +F G + S++I++KG
Sbjct: 491 ---------------------NVLVEIDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 529
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++A + +F + K +V + +L+ LC +G + AM +LZ +++K
Sbjct: 530 GKGEWDKA----WQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQK--- 582
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
RHR P+ +Y+ + L + G+ E K
Sbjct: 583 -----RHR----------------------------PNAVTYALLMEGLCSLGKYKEAKK 609
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P L+ + ++ L + G +D+ + + EM + F P V YNIL+ L
Sbjct: 610 MMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDX-KTLLLEMKRRRFKPDVVTYNILINXL 668
Query: 378 CDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G + A L +M QVG C N TY ++VDG C+ F +VL ML+ + P
Sbjct: 669 CKEGRAXEAYKVLVEM--QVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCP 726
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+E++ L+ GL GK A LEEM + + W +LV C
Sbjct: 727 RLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 774
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 204/457 (44%), Gaps = 21/457 (4%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+ + LTP+ ++++ +P ALK F+ ++ N H+ Y+ ++ LSE
Sbjct: 98 FSKTLTPSIAFEVVRGLNNPELALKFFQLSRVNL-NLCHSFRTYSFLLRSLSEMGFHESA 156
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K V D M D SV + + AG+ N A + + +F+ V +N LL +
Sbjct: 157 KAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGV-EFSLV----VYNKLLNQ 211
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V+ ++++ A + F R G S N+L+ LC+ + D A +F EM GC P
Sbjct: 212 LVRGNQVDEA-VCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSP 270
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y+ L+ G C ++ LL + +S+ D+V Y +++ C GK++ A
Sbjct: 271 DVITYNTLINGFCRVNEVDRGHDLLKEL---LSKNDLSPDVVTYTSIISGYCKLGKMEKA 327
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++ G+K P + I + D+ A+++ E L+ G P + +++++
Sbjct: 328 SILFNNMISSGIK-PNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLID 386
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE----EMVK 360
G++ K+ E+ + P+ + AL K+ + EA + + +V
Sbjct: 387 GHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVA 446
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
F+ YN ++ G C AGN A + L +M ++ C + TY IL+ G C GR
Sbjct: 447 QPFM-----YNPVIDGFCKAGNVDEANVILAEMEEK-RCKPDKITYTILIIGHCMKGRLS 500
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
EA + ML P T LI L G EA
Sbjct: 501 EAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEA 537
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 52/386 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKG-----DSCECKDSVFATAIRTYARAGQLNEAVS 101
VY ++ L N++ E + G DSC F IR R G++++A
Sbjct: 204 VYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCS-----FNILIRGLCRIGKVDKAFE 258
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + F C ++NTL+ + ++++ H L ++ + + ++
Sbjct: 259 LFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGY 318
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + + A +F M G P+ +++IL+ G + A ++ M G
Sbjct: 319 CKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLL----GC 374
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
DI+ + +L+ C GK++ ++++ ++ + L
Sbjct: 375 PPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLS------------------------ 410
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
P+ +++ + L E R+ E L +++ + MY +
Sbjct: 411 ------------PNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGF 458
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G VDEA VI EM + P Y IL+ G C G + A+ +M GC
Sbjct: 459 CKAGNVDEA-NVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRM-LGTGCAP 516
Query: 402 NGETYGILVDGLCRDGRFLEASRVLE 427
+ T L+ L + G EA R+++
Sbjct: 517 DSITMTSLISCLLKAGMPNEAYRIMQ 542
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 142/338 (42%), Gaps = 14/338 (4%)
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQ--EMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S+ + ++ +V+ +LAL FQ ++ C+ R +Y L++ L ++ +E+
Sbjct: 99 SKTLTPSIAFEVVRGLNNPELALKFFQLSRVNLNLCHSFR-TYSFLLRSL-SEMGFHESA 156
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+Y ++ G D + L+ + D GK A ++ + + K +
Sbjct: 157 KAVYDC---MNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEFSLVVYNKLLNQLV 213
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G ++ A E + G S++ + L G++ + ++ +EMR G
Sbjct: 214 R------GNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFG 267
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P ++ Y + + VD ++++E + K P V Y ++ G C G A
Sbjct: 268 CSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKA 327
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ M G N T+ IL++G + G + A + EEML+ P + T+ LI
Sbjct: 328 SILFNNMISS-GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLID 386
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C GK ++ E+ ++ P+ ++ L ++C
Sbjct: 387 GHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALC 424
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 182/392 (46%), Gaps = 16/392 (4%)
Query: 92 RAGQLNEAVSLFK-NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKS 149
RAG N+A+ LF+ N Q + T +N L++ S L+AA L G +
Sbjct: 3 RAGSHNQALQLFRENPCQLPASSVT--YNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60
Query: 150 RIQSLNLLMDVLCQCRRSDLAL-HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
R S+ ++ LC+C R AL H ++ PD SY L+ GLC R++ A L
Sbjct: 61 RTTSI--ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 118
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M ++ G + Y L+ LC Q ++ A ++ + RK AP + +
Sbjct: 119 FRKM---VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEA-RKRDFAPDVVTYNTLM 174
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
++ A + + G +P+L S++A+ L R+ + +V +EM + F
Sbjct: 175 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 234
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+LV Y + L K +DEA ++++ MV P + Y L+ G AG A+
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDR-MVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 293
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L++M Q GC+ + TY +++D LC+ GR +A + E++ P V TY+ LI G
Sbjct: 294 LLRRMVSQ-GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 352
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C + E + EM + P++ +++++
Sbjct: 353 CRASRVDEGGKVMREMACR---PNVVTYNTMI 381
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 7/333 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-THLLYS 211
+ N+L+ C D A + +EMD +G + + I+++GLC R+ +A H S
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
+ +Q D+V Y TL+ LC G++ A + K++ G P + + +
Sbjct: 87 LELAHAQP----DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 142
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ ++ A+++I EA R P + +Y+ + L+ GR+ E +M +G+ P+L
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V + A + L + + +ALEV E M+ F P + Y++++ GLC + A L
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNE-MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + GC + Y LV G GR A +L M+ + P V TY V+I LC +
Sbjct: 262 RMVSE-GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A E+++ P++ +S+L+ C
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 353
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 176/396 (44%), Gaps = 15/396 (3%)
Query: 87 IRTYARAGQLNEAVSLFK--NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
IR + A L+ A SL + ++ C + T S +L+ + + ++ A F S
Sbjct: 32 IRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSI--ILQGLCRCGRVAQALEHFDASLEL 89
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLN 203
+ + S L++ LC+ R D A +F++M GC P+ +Y+ L+ GLC RL+
Sbjct: 90 AHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLD 149
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A ++ ++ D+V Y TL+ AL G++ +A+ ++ +G
Sbjct: 150 AAR----AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ I C + A + NE + R P+L +YS + L ++ E ++LD M
Sbjct: 206 NAIITGLCR-ARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
++G P LV Y + G +D AL ++ MV +P V Y +++ LC G
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR-MVSQGCIPDVVTYTVVIDKLCKVGRV 323
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A +++ C N TY L+ G CR R E +V+ EM R P V TYN
Sbjct: 324 DDAHEIFRELVAN-KCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNT 379
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+I GL + + EA EM +PD + L
Sbjct: 380 MIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 190/423 (44%), Gaps = 14/423 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++F+E + P + Y +I ++ + ++ +M + +C D +
Sbjct: 10 ALQLFRENPCQLP---ASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSII 66
Query: 87 IRTYARAGQLNEAVSLFK-NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
++ R G++ +A+ F +L + S+ TL+ + K +++AA LF +
Sbjct: 67 LQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG 126
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + N L+D LC+ R D A V E + PD +Y+ LM L R++EA
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ F +++++G +V + ++ LC ++ DA+++ +++ + P +
Sbjct: 187 ----LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH-PNLVTYS 241
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + + ++ A+ L++ + G P L +Y+ + + GR+ +L M ++
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + L K G VD+A E+ E +V P V Y+ L+ G C A
Sbjct: 302 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE-LVANKCSPNVVTYSALIGGYCRASR--- 357
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
V K+ +++ C N TY ++ GL R EA + EM + P TY L
Sbjct: 358 -VDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 416
Query: 446 RGL 448
R L
Sbjct: 417 RAL 419
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S +Y+ + N + +L EM +G + L L + G V +ALE
Sbjct: 24 SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ + P V Y L+ GLC G A +KM GC N TY LVDGLC
Sbjct: 84 DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R A V+ E R + P V TYN L+ L +G+ EA+ +M + +P +
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203
Query: 475 VWSSLVASVC 484
+++++ +C
Sbjct: 204 SFNAIITGLC 213
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 200/441 (45%), Gaps = 24/441 (5%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+AL+IF + + Y+ +I +L S R + ++ DQM S D+VF +
Sbjct: 92 SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151
Query: 86 AIR-TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF------ 138
+ + AG L+ AV+L SQF ++N LL ++ + + A LF
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211
Query: 139 -LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L S GW S N+++ +C+ AL + + M GC PD +++IL+ GLC
Sbjct: 212 GLYSPDGW-------SFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLC 264
Query: 198 NDRRLNEATHLLYSMFWRISQKG-SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+++N LL R+ + G ++V Y +++ C G+++DA+ + +L G
Sbjct: 265 RAKQVNRGHDLLR----RLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGT 320
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEG 315
+ P + + + + D+E A + + ++R P + ++S++ ID Y G++ +
Sbjct: 321 R-PNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSL-IDGYCRCGQLDDA 378
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++ EM P++ + + +L K EAL + E ++ P +YN ++
Sbjct: 379 MRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVID 438
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC G A + + M ++ GC + TY IL+ G C GR EA + +M+
Sbjct: 439 ILCKGGQVEEANLIVTDMEEK-GCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCR 497
Query: 436 PCVETYNVLIRGLCSIGKQYE 456
P T N I + G E
Sbjct: 498 PDKITVNSFISCVLKAGMPNE 518
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 9/336 (2%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
QS + ++ +LC+ R AL +F +M Q Y + + G C + L +A +
Sbjct: 112 QSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAA---VT 168
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
+ + SQ G + Y LL L +G+ QDA+ + E ++ GL +P + +
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF-WPS 330
+ + A L+ G P +++ + L ++ G +L ++ G P+
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MY 389
+V Y + ++ K G +++AL V + + GT P YN+L+ G A + AV MY
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGT-RPNTVTYNVLINGYGKALDMESAVRMY 347
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ + ++ C + T+ L+DG CR G+ +A R+ +EM P V T++++I LC
Sbjct: 348 RQLILRR--CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLC 405
Query: 450 SIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
+ EA+ +L E+ +A + P +++ ++ +C
Sbjct: 406 KQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILC 441
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 190/410 (46%), Gaps = 16/410 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ + I +AG +N+A+ LF +++ NC ++ +N + +++ S+L AH + R
Sbjct: 13 YRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHV 72
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRS---DLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + LC + L + +MD G PD +++ + LC
Sbjct: 73 IPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQ 132
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
RL A L +SM KG D+V Y ++ ALC+ + +A ++ +++ KGL
Sbjct: 133 NRLETALELFHSM----PSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP--SLASYSAMAIDLYNEGRIVEGDK 317
+ + C+ G ++ A L+ +I+GG+ SL Y+A+ GR+ + K
Sbjct: 189 YKACVALVVGLCSGGR-VDLAYELV-VGVIKGGVKVNSLV-YNALIDGFCRMGRVDKAMK 245
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ M G P LV Y L ++GMVDEA+ ++E M + P + YN LLKG
Sbjct: 246 IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET-MERSGVEPDLYSYNELLKGF 304
Query: 378 CDAGNSAVA-VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A A +M +++M + C + +Y ++ C+ R + + EEM + P
Sbjct: 305 CKANMVDRAHLMMVERMQTKGMC--DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRP 362
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ T+N+LI G + L+EM LPD ++++V +C N
Sbjct: 363 DMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKN 412
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 128/320 (40%), Gaps = 45/320 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY ++I R+ + ++ M C + + G ++EAV L
Sbjct: 223 NSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLV 282
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR--IQSLNLLMDVL 161
+ + + S+N LLK K + ++ AH++ + + K + S N ++
Sbjct: 283 ETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVER---MQTKGMCDVVSYNTVITAF 339
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ RR+ +F+EM +G PD +++IL+ + +TH++ + +++
Sbjct: 340 CKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLRE----GSTHVVKKLLDEMTKMRV 395
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D + Y ++ LC GK+ A + ++ G+
Sbjct: 396 LPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVN------------------------ 431
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
P + SY+A+ R+++ + DEM++KG +P V Y+ + L
Sbjct: 432 ------------PDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGL 479
Query: 342 FKDGMVDEALEVIEEEMVKG 361
+ + A V ++ M +G
Sbjct: 480 IRGKKISLACRVWDQMMERG 499
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 200/439 (45%), Gaps = 22/439 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + + + + ++ +M + C + FAT IR + + G L+ AV L +
Sbjct: 214 TYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM 273
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q+ C ++TL+ ++ +++ A L G K N + LC +R
Sbjct: 274 PQYGCTPDVVIYSTLVNGFSEQGRVDDAIELL----NGMLCKPNTICYNAALKGLCIAQR 329
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM + C P+ ++ +L LC + ++ A +L M + G D V
Sbjct: 330 WEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMH----KYGCRPDAV 385
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
IY TL+++ +QG++ DA+++L + +P L E + A+ LI +
Sbjct: 386 IYNTLIYSFSEQGRVDDALKLLNSMP----CSPDVISFNAALKGLCRAERWDDAEELIVQ 441
Query: 287 ALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
++R P + + ID L GR+ +V ++M G P +V Y + + L + G
Sbjct: 442 -MLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQG 500
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+V+ A+E+ + K P + YN +LKGLC A A + M+++ C N T
Sbjct: 501 LVESAIELFQSMPCK----PDIFGYNAVLKGLCRAARWEDAGELISNMARK-DCPPNEIT 555
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ IL++ LC+ G A V E+M P + TYN LI G G+ +A L M
Sbjct: 556 FNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS 615
Query: 466 SQAKLPDISVWSSLVASVC 484
+ PD ++S + +C
Sbjct: 616 CK---PDAVSYNSALKGLC 631
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 134/324 (41%), Gaps = 41/324 (12%)
Query: 190 HILMKGLCNDRRLNEATHLLYSM-----------------FWRISQKGSGE--------- 223
+IL+K LC RRL +A +L ++ + R + E
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAAAGLS 175
Query: 224 ---DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y TL+ C G++ DA+ ++ + AP + + L E A
Sbjct: 176 GAANVVTYTTLINGYCRSGRLADALALIASM----PVAPDTYTYNTVLMGLCGARQWEDA 231
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++L+ E + P+ +++ G + ++LD M G P +V+Y +
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ G VD+A+E++ + K P YN LKGLC A + +M ++ C+
Sbjct: 292 FSEQGRVDDAIELLNGMLCK----PNTICYNAALKGLCIAQRWEDVGQLIVEMVRK-DCL 346
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N T+ +L LC++G A VLE+M P YN LI G+ +A+
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
L M PD+ +++ + +C
Sbjct: 407 LNSMPCS---PDVISFNAALKGLC 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L ++ R+ EV +QM C +++ I + G + A+ LF+++
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP--- 513
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C +N +LK + + ++ E A L + C E+ + N+L++ LCQ
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEI-----TFNILINSLCQKGL 568
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ VF++M G PD +Y+ L+ G RL++A LL +M + D V
Sbjct: 569 VDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK-------PDAV 621
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
Y + L LC + ++A +++ ++LR +K P +
Sbjct: 622 SYNSALKGLCRAERWKEAEEVVAEMLR--MKCPPN 654
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V L+ LC Q ++ DA ++L+ + G P S + C DG + + L
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLV-AGYCRDGRLADAERLLA 170
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
L ++ +Y+ + GR+ + ++ M P Y L L
Sbjct: 171 AAGLSGAA--NVVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGA 225
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
++A E + EMV+ P + ++ C G AV L +M Q GC +
Sbjct: 226 RQWEDA-EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMP-QYGCTPDVV 283
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL-EE 463
Y LV+G GR +A +L ML + C YN ++GLC I +++E V L E
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGMLCKPNTIC---YNAALKGLC-IAQRWEDVGQLIVE 339
Query: 464 MISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
M+ + LP+ + +S L + +C N ++ + LEQ+
Sbjct: 340 MVRKDCLPNEATFSMLTSCLCQNGL-VDCAMEVLEQM 375
>gi|356574070|ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 720
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 231/480 (48%), Gaps = 20/480 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P L + + + +A++IFK A + ++ H Y +I L + ++ EM++
Sbjct: 54 LAPDNLIRALDRTSDLNSAVRIFKWASRQ-KSFHHTSNTYFRIILKLGMAGKVLEMRDFC 112
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV-K 127
+ M D C + + T+ ++ EA+++ N++ + FN LL +V +
Sbjct: 113 EYMVKDRCPGAEEALVALVHTFVGHHRIKEAIAVLVNMNLGGYRPPIEVFNVLLGALVGR 172
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
ES+ + + + V + +LN L++VL R++LALH F+ M+ +GC P+ +
Sbjct: 173 ESRDFQSALFVYKEMVKACVLPTVDTLNYLLEVLFATNRNELALHQFRRMNNKGCDPNSK 232
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
++ IL+KGL +++EA +L M Q D+ Y ++ C + K+++A+++
Sbjct: 233 TFEILVKGLIESGQVDEAATVLEQMLKHKCQP----DLGFYTCIIPLFCRENKVEEAVKL 288
Query: 248 LEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
K+++ P S + + + C CN+ + ++ A SLINE +I G+P + ++
Sbjct: 289 F-KMMKDSDFVPDSFIYEVLVRCFCNNLQ-LDSAVSLINE-MIEIGMPPKHNVLVDMMNC 345
Query: 307 YNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+ E G+I E L++ + P + E A G V A V+ E M + +
Sbjct: 346 FCELGKINEAIMFLEDTQVHETAPFNTLLEGCCNA----GEVLAA-NVLLETMSERN-IA 399
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ +NIL++ LC+ + A + L +M K + + TY LV G CR G++ EA +
Sbjct: 400 DCQSWNILIRWLCENEETNKAYILLGRMIKSF-VILDHATYSALVVGKCRLGKYEEAMEL 458
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM-ISQAKLPDISVWSSLVASVC 484
++ R + +Y+ L+ GL I +A+ M + + L +S + L+ VC
Sbjct: 459 FHQIYARCWVLDFASYSELVGGLSDIKHSQDAIEVFHYMSMKRCSLHSLSFY-KLIKCVC 517
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD-EALEVIEEEMV 359
A+ RI E VL M G+ P + ++ L AL D ++ + +EMV
Sbjct: 129 ALVHTFVGHHRIKEAIAVLVNMNLGGYRPPIEVFNVLLGALVGRESRDFQSALFVYKEMV 188
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K +PTV N LL+ L + +A+ ++M+ + GC N +T+ ILV GL G+
Sbjct: 189 KACVLPTVDTLNYLLEVLFATNRNELALHQFRRMNNK-GCDPNSKTFEILVKGLIESGQV 247
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA+ VLE+ML P + Y +I C K EAV + M +PD ++ L
Sbjct: 248 DEAATVLEQMLKHKCQPDLGFYTCIIPLFCRENKVEEAVKLFKMMKDSDFVPDSFIYEVL 307
Query: 480 VASVCCN 486
V C N
Sbjct: 308 VRCFCNN 314
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 178/419 (42%), Gaps = 16/419 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+FK K+ ++ + +Y ++ + ++ +I++M K +V
Sbjct: 285 AVKLFKMMKDS--DFVPDSFIYEVLVRCFCNNLQLDSAVSLINEMIEIGMPPKHNVLVDM 342
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G++NEA+ ++ V+ T FNTLL+ ++ AA++L
Sbjct: 343 MNCFCELGKINEAIMFLEDTQ----VHETAPFNTLLEGCCNAGEVLAANVLL--ETMSER 396
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ QS N+L+ LC+ ++ A + M D +Y L+ G C + EA
Sbjct: 397 NIADCQSWNILIRWLCENEETNKAYILLGRMIKSFVILDHATYSALVVGKCRLGKYEEAM 456
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L + ++ R D Y L+ L D QDA+++ + K +++
Sbjct: 457 ELFHQIYARCWVL----DFASYSELVGGLSDIKHSQDAIEVFHYMSMKRCSLHSLSFYKL 512
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C C+ G+ + A L A G +A+++ + +L R + L +M G
Sbjct: 513 IKCVCDSGQ-VNQAIRLWQLAYFCGISCCIATHTTIMRELSKSRRAEDLLAFLSQMLMVG 571
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
L Y ++ K V E + + +G R+++ L + + ++
Sbjct: 572 SNLDLEAYCILFQSMSKHNKVKECVLFFNMMVHEGLIPDPDRLFD-QLSFIANHSQLSMI 630
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ ++S G + N +G+L+ L ++G+ EA R+L+ ML + + P T+N+LI
Sbjct: 631 PSAIDRISD--GDILNPAMFGLLITALLKEGKEHEARRLLDLMLEKGWLPDATTHNLLI 687
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 184/470 (39%), Gaps = 56/470 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T YL +++ AL F+ K N + ++ L ES ++ E
Sbjct: 194 PTVDTLNYLLEVLFATNRNELALHQFRRMNNK--GCDPNSKTFEILVKGLIESGQVDEAA 251
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V++QM C+ + I + R ++ EAV LFK M
Sbjct: 252 TVLEQMLKHKCQPDLGFYTCIIPLFCRENKVEEAVKLFK--------------------M 291
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K+S F+ + +EV L+ C + D A+ + EM G P
Sbjct: 292 MKDSD-------FVPDSFIYEV---------LVRCFCNNLQLDSAVSLINEMIEIGMPPK 335
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+M C ++NEA MF +Q + + TLL C+ G++ A
Sbjct: 336 HNVLVDMMNCFCELGKINEAI-----MFLEDTQV---HETAPFNTLLEGCCNAGEVLAAN 387
Query: 246 QILEKILRKGLKAPKSRRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+LE + + + +S I LC + E+ A L+ + I A+YSA+ +
Sbjct: 388 VLLETMSERNIADCQSWNILIRWLC---ENEETNKAYILLGRMIKSFVILDHATYSALVV 444
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G+ E ++ ++ + + Y + L +A+EV +K +
Sbjct: 445 GKCRLGKYEEAMELFHQIYARCWVLDFASYSELVGGLSDIKHSQDAIEVFHYMSMKRCSL 504
Query: 365 PTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
++ Y L+K +CD+G N A+ + L C+A T+ ++ L + R +
Sbjct: 505 HSLSFYK-LIKCVCDSGQVNQAIRLWQLAYFCGISCCIA---THTTIMRELSKSRRAEDL 560
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
L +ML+ +E Y +L + + K E V++ M+ + +PD
Sbjct: 561 LAFLSQMLMVGSNLDLEAYCILFQSMSKHNKVKECVLFFNMMVHEGLIPD 610
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 206/468 (44%), Gaps = 82/468 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + P AL +F + ++ ++H+ P Y++++ L+ S ++ ++D ++ +
Sbjct: 459 LKSVQDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIR 516
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++++F I+ Y ++ +AV LF+ + FNC SFNT
Sbjct: 517 CRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNT----------------- 559
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L++VL + R A+ +F G + S++I++KG
Sbjct: 560 -------------------LLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 600
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++A + +F + K +V + +L+ LC +G + AM +LE +++K
Sbjct: 601 GKGEWDKA----WQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQK--- 653
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
RHR P+ +Y+ + L + G+ E K
Sbjct: 654 -----RHR----------------------------PNAVTYALLMEGLCSLGKYKEAKK 680
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P L+ + ++ L + G +D++ + + EM + F P V YNIL+ L
Sbjct: 681 MMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDS-KTLLLEMKRRRFKPDVVTYNILINHL 739
Query: 378 CDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G + A L +M QVG C N TY ++VDG C+ F +VL ML+ + P
Sbjct: 740 CKEGRALEAYKVLVEM--QVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCP 797
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+E++ L+ GL GK A LEEM + + W +LV C
Sbjct: 798 RLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 845
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 190/411 (46%), Gaps = 56/411 (13%)
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
F+ V T+ FN +L + K+ +L + I +LN++++ C+C ++
Sbjct: 72 FSGVASTKQFNLVL-DFCKKMELNG-------------IAHNIYTLNIMINCFCRCCKTC 117
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A V ++ G PD +++ L+ GLC + +++EA L+ R+ + G ++V Y
Sbjct: 118 FAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLV----ARMVENGCQPNVVTY 173
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+++ +C G A+ +L K+ + +KA I C DG I+ A SL E
Sbjct: 174 NSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC-IDAAISLFKEME 232
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+G SL +Y+++ L G+ +G ++L +M ++ P+++ + + K+G +
Sbjct: 233 TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMY-------------- 389
EA E+ +E + KG P YN L+ G C N+ + +M
Sbjct: 293 EANELYKEMITKG-ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351
Query: 390 ----------------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+K+SK+ G VAN TY ILV G C+ G+ A + +EM+
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKR-GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY +L+ GLC GK +A+ E++ DI +++ ++ +C
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 197/425 (46%), Gaps = 46/425 (10%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T +FNTL+ + ESK+ A +L R + + + N +++ +C+ + LAL +
Sbjct: 135 TTTFNTLINGLCLESKVSEAVVLVARMVENG-CQPNVVTYNSIVNGICKSGDTSLALDLL 193
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++MD + D +Y ++ LC D ++ A S+F + KG +V Y +L+
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAI----SLFKEMETKGIKSSLVTYNSLVGG 249
Query: 235 LCDQGKIQDAMQILEKIL-RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC GK D +Q+L+ + RK + + ID+ +G+ ++ A L E + +G
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF-VKEGK-LQEANELYKEMITKGIS 307
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+ +Y+++ + R+ E + +LD M P +V + + + K VDE +++
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ +G TV Y+IL++G C +G +A ++M +G + + TYGIL+DGL
Sbjct: 368 FRKISKRGLVANTV-TYSILVQGFCQSGKLEIAEELFQEMV-SLGVLPDVMTYGILLDGL 425
Query: 414 CRDGRFLEASRVLEEML-----------------------IRSYW------PC------V 438
C +G+ +A + E++ + W PC V
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 485
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
TY V+I GLC G EA + L +M P+ +++L+ + DL K +E
Sbjct: 486 MTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH-LRDGDLTASAKLIE 544
Query: 499 QLSSC 503
++ SC
Sbjct: 545 EMKSC 549
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 198/458 (43%), Gaps = 51/458 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + I K AL + ++ E+ N + + Y+++I L I
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDER--NVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M+ + + + + +AG+ N+ V L K+++ + +FN L+
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE KL+ A+ +++EM +G P+
Sbjct: 286 VKEGKLQEAN------------------------------------ELYKEMITKGISPN 309
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ + M
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMV----RNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ KI ++GL A + C G+ +E A+ L E + G +P + +Y +
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGK-LEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 483
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 484 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNEPNDCTYNTLIRAHLRDGDLTASAKL 542
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+EEM + + ++I L S AV W +E
Sbjct: 543 IEEMKSCGFSADASSIKMVIDMLSS------AVWWFKE 574
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 191/444 (43%), Gaps = 64/444 (14%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+P + ++I Q PL A +IF A + P++R + +I L S + + +++
Sbjct: 72 SPCRVQKLIASQSDPLLAKEIFDYACRQ-PHFRPSSSSLLVLILKLGRSKYFSLIDDLLL 130
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
K + F+ I+ Y A ++A+ +F + F C ++ N +L+ +V
Sbjct: 131 SFKSRRYPVTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHR 190
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ V +S N+L+ C +A +F +M + PD E+Y
Sbjct: 191 NFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETY 250
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
LM+GLC ++N A LL M KG D + Y TLL +LC + K+++A ++L
Sbjct: 251 RTLMQGLCRKNQVNGAVDLLEDML----NKGYIPDTLSYATLLNSLCRKKKLREAYKLLC 306
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ KG CN P +A Y+ + + E
Sbjct: 307 RMKVKG---------------CN---------------------PDIAHYNTVIMGFCRE 330
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR ++ K+L++M++ G P+LV YE+ L GM + A +EE +KG F P V
Sbjct: 331 GRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKG-FYPHFSV 389
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC--------------- 414
+ L+KG G + L+ M K+ G + +T+ I++ G+C
Sbjct: 390 IHALVKGFHSIGRIHESCSVLEDMLKR-GKAPHSDTWEIIISGICEVEDTAKFCEVWEKI 448
Query: 415 ------RDGRFLEASRVLEEMLIR 432
RD R +EA L E LIR
Sbjct: 449 LKKDVRRDTRIVEAGTGLGEYLIR 472
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 41/317 (12%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D AL VF M GC P + + +++ L + R + +F G +
Sbjct: 158 DKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPA---FDLFKNARHHGVLPNTKS 214
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ A C G +I A +L N+
Sbjct: 215 YNILIRAFCWNG------------------------------------NISIAYTLFNKM 238
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R IP + +Y + L + ++ +L++M KG+ P + Y L +L + +
Sbjct: 239 FERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKL 298
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA +++ VKG P + YN ++ G C G + A L+ M GC+ N +Y
Sbjct: 299 REAYKLLCRMKVKGC-NPDIAHYNTVIMGFCREGRALDACKILEDMQSN-GCLPNLVSYE 356
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L +GLC G F A +EEM ++ ++P + L++G SIG+ +E+ LE+M+ +
Sbjct: 357 SLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKR 416
Query: 468 AKLPDISVWSSLVASVC 484
K P W +++ +C
Sbjct: 417 GKAPHSDTWEIIISGIC 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWPSLVMYEAKLAALFKD-GMVDEAL 351
P+ SY I +Y E + + KV M G PS L L + A
Sbjct: 141 PTAFSY---IIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAF 197
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++ + G +P + YNIL++ C GN ++A KM ++ + + ETY L+
Sbjct: 198 DLFKNARHHGV-LPNTKSYNILIRAFCWNGNISIAYTLFNKMFER-NVIPDVETYRTLMQ 255
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GLCR + A +LE+ML + Y P +Y L+ LC K EA L M + P
Sbjct: 256 GLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNP 315
Query: 472 DISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
DI+ +++++ C L+ C K LE + S
Sbjct: 316 DIAHYNTVIMGFCREGRALDAC-KILEDMQS 345
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 230/542 (42%), Gaps = 63/542 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P T ++ + +++S A ++F++ PN + MI L + + E +
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPA--PNVF----TFNIMIDFLCKEGDLAEAR 214
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +MK C + + I Y + G+L E L + C ++N L+
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K ++E A+ F V + + + + +D C+ A+ +F +M +G P+
Sbjct: 275 CKFGRMERAYSYFAEM-KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPN 333
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y L+ G C RL++A L M Q+G ++V Y L+ LC +GK+ +A
Sbjct: 334 EVTYTCLVDGTCKAGRLDDALVLTNEMV----QQGVPLNVVTYTVLVDGLCKEGKVAEAE 389
Query: 246 QILEKILRKGLKAPK------SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + R G++A + H + ++ E A SL++E +G ++ Y
Sbjct: 390 DVFRLMERAGIRANELLYTTLIHGHFV-------YKNSERALSLLSEMKDKGMELDVSLY 442
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
A+ L N ++ E +L++M G P+ V+Y + A FK EA+ ++++ M
Sbjct: 443 GALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMD 502
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
G F P + Y L+ GLC AG+ A+ + KM +G N + Y LVDGLC++GR
Sbjct: 503 SG-FRPNIVTYCALVDGLCKAGSIDEAISHFNKMV-DLGLEPNVQAYTALVDGLCKNGRL 560
Query: 420 LEASRVLEEMLIRSY----WPCVET-------------------------------YNVL 444
+A +L+EM+ + C Y
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV--CCNTADLNVCRKTLEQLSS 502
+ G C++ EA L EMI PD V++ L+ N + + + +E L S
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESLLS 680
Query: 503 CS 504
C+
Sbjct: 681 CT 682
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR--HRIDLCPCNDGEDIEGAKSLI 284
+ TLL L D+G + DA+ L ++ + L+ P + R + I LC E + L
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARV--RELRVPPNTRTCNHILLCLAR-----ERSSELA 182
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ P++ +++ M L EG + E +L M+ G P +V Y + + K
Sbjct: 183 WRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKC 242
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G ++E +E + EM P V YN L+ C G A Y +M ++ G +AN
Sbjct: 243 GELEE-VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKRE-GVMANVV 300
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
T+ VD C++G EA ++ +M ++ P TY L+ G C G+ +A++ EM
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ Q ++ ++ LV +C
Sbjct: 361 VQQGVPLNVVTYTVLVDGLC 380
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 200/400 (50%), Gaps = 15/400 (3%)
Query: 90 YARAGQLNEAVSLFKNLSQFN--CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ R G ++ S+F +S + CVN + + L+ S+ E F RS Y
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
S + L++ +L Q R +D+ ++++EM + P+ ++++++ LC ++N+A
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVE-YLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCD---QGKIQDAMQILEKILRKGLKAPKSRRH 264
++ M G ++V Y TL+ C GK+ A +L++++ + +P
Sbjct: 245 VMEDM----KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEV-SPNLTTF 299
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ G+ + E L + IP++ +Y+++ L N G+I E + D+M +
Sbjct: 300 NILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVS 359
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P+L+ Y + + K+GM+ EAL++ + +GT PT R+YN+L+ C G
Sbjct: 360 AGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT-RPTTRMYNMLIDAYCKLGKID 418
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
++M ++ G V + TY L+ GLCR+G +EA++ L + L P + T+++L
Sbjct: 419 DGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGN-IEAAKKLFDQLTNKGLPDLVTFHIL 476
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ G CS G+ +A M L+EM P ++ ++ C
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYC 516
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 194/427 (45%), Gaps = 30/427 (7%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ +L + NR +++ + +M + F I + G++N+A + +++ +
Sbjct: 195 MVALLKQ-NRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 111 CVNWTQSFNTLLKEMVK---ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
S+NTL+ K K+ A + L+ EV + + N+L+D +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAV-LKEMVENEVSPNLTTFNILIDGFWKDDNL 312
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+L VF+EM Q P+ +Y+ L+ GLCN ++NEA M ++ G +++
Sbjct: 313 PGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI----GMRDKMVSAGVQPNLIT 368
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
Y +L+ C G +++A+ + + + +G + P +R + + + C G+ I+ +L E
Sbjct: 369 YHSLINGFCKNGMMKEALDMFDSVKGQGTR-PTTRMYNMLIDAYCKLGK-IDDGFALKEE 426
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P + +Y+ + L G I K+ D++ KG P LV + + G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGE 485
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A +++E M K P YNI++KG C GN A +M K+ N +Y
Sbjct: 486 SRKAAMLLKE-MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ G + G+ +A+ +L EML + P TY ++ EEM+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV----------------KEEMVD 588
Query: 467 QAKLPDI 473
+ +PDI
Sbjct: 589 KGFVPDI 595
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 9/304 (2%)
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N L + F R G + + L+ AL Q + D + ++++R+ ++
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFT 225
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY----NEGRIVEGDKV 318
+ + C G+ + A+ ++ + + G P++ SY+ + ID Y G++ + D V
Sbjct: 226 FNVVINALCKTGK-MNKARDVMEDMKVYGYSPNVVSYNTL-IDGYCKLGGNGKMYKADAV 283
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L EM P+L + + +KD + +L+V +E M+ +P V YN L+ GLC
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE-MLDQDVIPNVITYNSLINGLC 342
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G A+ KM G N TY L++G C++G EA + + + + P
Sbjct: 343 NGGKINEAIGMRDKMV-SAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
YN+LI C +GK + EEM + +PD+ ++ L+A +C N ++ +K +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-GNIEAAKKLFD 460
Query: 499 QLSS 502
QL++
Sbjct: 461 QLTN 464
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T L K + +LK+FKE ++ + N Y S+I L +I E
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQ--DVIPNVITYNSLINGLCNGGKINEAI 351
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ D+M + + + I + + G + EA+ +F ++ T+ +N L+
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ L + + + N L+ LC+ + A +F ++ +G PD
Sbjct: 412 CKLGKIDDGFAL-KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PD 469
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++HILM+G C+ +A LL M S+ G + Y ++ C +G ++ A
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEM----SKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLAS 298
+ ++ K RR R+++ N +E A L+NE L +G +P+ +
Sbjct: 526 NMRTQM-------EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTK 325
Y + ++ ++G + + + L + TK
Sbjct: 579 YEIVKEEMVDKGFVPDIEGHLFNVSTK 605
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 187/399 (46%), Gaps = 24/399 (6%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + + GQ+++AVS+F ++ + + NTLL + + ++ +A LF R
Sbjct: 32 IRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF-REMQAGP 90
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
S N+L+ R A+ F+EM G PD ESYHIL+ L + R+ EA
Sbjct: 91 FLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA- 146
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
H L+S DI+ Y L+ C G+ +A ++++IL+ G + I
Sbjct: 147 HALFSAMT------CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C C + +E A + + + +P+ +++ + G + + K+ EM G
Sbjct: 201 INCYCKL-DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259
Query: 327 FWPSLVMYEAKLAALFKD-GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
++V Y + +L K G V A+++ + G PT+ YN L++G + N +
Sbjct: 260 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG-LTPTIVTYNSLIQGFSERANDGL 318
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L M + GC + TY L+ GLC R +A R+ M + P V T+N LI
Sbjct: 319 RL--LCHMHAE-GCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLI 372
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
RGLC+ K EA L+ M + PD++ +++++ + C
Sbjct: 373 RGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFC 407
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 48/320 (15%)
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R+ D AL +F+E+ P+ +Y++L++G C ++++A S+F + G +
Sbjct: 4 RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAV----SVFSDMKSSGLLPN 59
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
TLL LC+ G++ A+++ + ++ G P S H I
Sbjct: 60 ASTMNTLLLGLCEIGQMSSALKLFRE-MQAGPFLPTSASHNI------------------ 100
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
L+RG + GR +E EM+ G P L Y L+AL
Sbjct: 101 ---LLRG--------------FFMAGRAIE---FFKEMKASGVEPDLESYHILLSALSDS 140
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + EA + T P + YN+L+ G C G + A +K++ K G N
Sbjct: 141 GRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK-AGYEPNVF 195
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY I+++ C+ + EA V +M+ + P T+N LI G C G +A+ EM
Sbjct: 196 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 255
Query: 465 ISQAKLPDISVWSSLVASVC 484
I +++L+ S+C
Sbjct: 256 EKIGCKATIVTYNTLIDSLC 275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 185/456 (40%), Gaps = 53/456 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++FKE + N Y +I + ++ + V MK S T
Sbjct: 9 ALRLFKEVLAGL--FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ GQ++ A+ LF+ + + + S N LL+ + I F +
Sbjct: 67 LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRA----IEFFKEMKASG 122
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V+ ++S ++L+ L R A +F M C PD +Y++LM G C + EA
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 179
Query: 207 HLL--------------YSM-----------------FWRISQKGSGEDIVIYRTLLFAL 235
L+ YS+ F ++ + + V + TL+
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G ++DA+++ ++ + G KA + + C + A L N+ G P+
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 299
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +Y+++ I ++E R +G ++L M +G P ++ Y ++ L V++A
Sbjct: 300 IVTYNSL-IQGFSE-RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA----- 352
Query: 356 EEMVKG-TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ + G P V +N L++GLC A L +M+ + T+ ++ C
Sbjct: 353 QRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT-----APDMTTFNTIILAFC 407
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ G +A V+++ML ++P T L G+ S
Sbjct: 408 KAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQS 443
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 205/452 (45%), Gaps = 17/452 (3%)
Query: 25 LTALKIFKEAKEKYPNYRH--------NGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
L+A K+A+E Y +++ + Y+++I ++ + ++D+M+
Sbjct: 5 LSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI 64
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
++V+ T I+ G+++ A+ ++++ Q +C ++ L+ + K +++ A
Sbjct: 65 VPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS- 122
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L L + + N L++ C+ D A+ +F +M C PD +Y+IL+ G
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C R + LL M + G + + Y TL+ +L GK DA + + +LR+
Sbjct: 183 CKQERPQDGAKLLQEMV----KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
K + + C G+ ++ A L RG +P + +Y+ M RI +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQ-LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++L+ M G P +V Y + ++ L K VDEA EV E G F+ V + L+ G
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC-STLIDG 356
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC + A L++M + G + Y IL+ G C+ + ++ EML + P
Sbjct: 357 LCKSRRLDDAEKLLREMERN-GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
V TY+++I LC + + M L+ M+ +
Sbjct: 416 TVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 9/366 (2%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N LL V++ K + A+ LF G I + + L++ C+ R A + EM+
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSI-TYSTLINGFCKARDFQQAYRLLDEME 60
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+G P Y+ ++KGLC++ R++ A + +R Q+ ++ Y L+ ALC
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSAL-----VHYRDMQRHCAPSVITYTILVDALCKS 115
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+I DA ILE ++ G + + C G +++ A L N+ L P + +
Sbjct: 116 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLG-NMDEAVVLFNQMLENSCSPDVFT 174
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + + R +G K+L EM G P+ + Y + +L K G +A + + M
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMM 233
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
++ P+ +N+++ C G +A + M+ + GC+ + TY I++ G CR R
Sbjct: 234 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR-GCLPDIYTYNIMISGACRANR 292
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A ++LE M P V TYN ++ GLC + EA E + + D+ S+
Sbjct: 293 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 352
Query: 479 LVASVC 484
L+ +C
Sbjct: 353 LIDGLC 358
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 204/439 (46%), Gaps = 22/439 (5%)
Query: 54 ILSESNRITEMKEVIDQMKGDSCE--CKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFN 110
+LS R + +E D K C DS+ ++T I + +A +A L + +
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V +NT++K + ++++A + + R C + + +L+D LC+ R
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHC-----APSVITYTILVDALCKSARI 118
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + ++M GC P+ +Y+ L+ G C ++EA L F ++ + D+
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL----FNQMLENSCSPDVFT 174
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C Q + QD ++L+++++ G + + + G+ I+ A +L
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID-AFNLAQMM 233
Query: 288 LIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L R PS +++ M ID++ + G++ ++ M +G P + Y ++ +
Sbjct: 234 LRRDCKPSHFTFNLM-IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 292
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY-LKKMSKQVGCVANGET 405
+D+A +++E M + P V YN ++ GLC A S V Y + ++ + G + T
Sbjct: 293 IDDARQLLER-MTEAGCPPDVVTYNSIVSGLCKA--SQVDEAYEVYEVLRNGGYFLDVVT 349
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
L+DGLC+ R +A ++L EM P V Y +LI G C + +++ + EM+
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409
Query: 466 SQAKLPDISVWSSLVASVC 484
+ +P + +S ++ +C
Sbjct: 410 DKGCVPTVITYSIVIDKLC 428
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 44/347 (12%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+ + +++ A +F+ C PD +Y L+ G C R +A LL M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM-- 59
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++G +Y T++ LCD G++ A+ H D+
Sbjct: 60 --EKRGIVPHNAVYNTIIKGLCDNGRVDSALV-----------------HYRDM------ 94
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
R PS+ +Y+ + L RI + +L++M G P++V Y
Sbjct: 95 --------------QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTY 140
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ K G +DEA+ V+ +M++ + P V YNIL+ G C L++M
Sbjct: 141 NTLINGFCKLGNMDEAV-VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 199
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K GC N TY L+D L + G++++A + + ML R P T+N++I C +G+
Sbjct: 200 K-YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 258
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
A + M + LPDI ++ +++ C ++ R+ LE+++
Sbjct: 259 DLAYELFQLMTDRGCLPDIYTYNIMISGA-CRANRIDDARQLLERMT 304
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI + + ++ E+ M C + I RA ++++A L + +++
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++N+++ + K S+++ A+ ++ LR+ G+ + + + + L+D LC+ RR D
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN-GGYFLD--VVTCSTLIDGLCKSRRLD 364
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A + +EM+ G PD +Y IL+ G C +L+++ + F + KG ++ Y
Sbjct: 365 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL----AFFSEMLDKGCVPTVITY 420
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGL 256
++ LC +++D +L+ +L +G+
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 226/527 (42%), Gaps = 86/527 (16%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+PN R N + + IL+E+ I + + + + + KD+ ++ +AG N
Sbjct: 16 HPN-RTNSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFN 74
Query: 98 EAVSLFKNL----SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
E++ ++L + + V T+ + L + ++ HIL +G + +
Sbjct: 75 ESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL---ENHG---HPDLIA 128
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-------- 205
N ++ C+ R D A V M +G PD +Y+IL+ LC+ L+ A
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188
Query: 206 ------THLLYSMFWRIS--QKGSGE---------------DIVIYRTLLFALCDQGKIQ 242
T + Y++ + Q G E D+ Y +++ +C +G +
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A QI+ I KG AP + I L + E L+++ + RG ++ +YS +
Sbjct: 249 RAFQIISSISSKGY-APDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ +G++ EG +L +M+ KG P Y+ +AAL K+G VD A+EV++ M+
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV-MISDG 366
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-------------------- 402
VP + YN +L LC + A+ +K+ +VGC N
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLG-EVGCSPNASSYNSMFSALWSTGHKVRA 425
Query: 403 ---------------GETYGILVDGLCRDGRFLEASRVLEEMLIRSYW--PCVETYNVLI 445
G TY L+ LCRDG EA +L +M + S P V +YN+++
Sbjct: 426 LGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVL 485
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV----CCNTA 488
GLC + + +A+ L M+ + P+ + ++ L+ + C N A
Sbjct: 486 LGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 47/264 (17%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+ + K+ K+K + +G Y +I L + R+ EV+D M D C + T
Sbjct: 320 GVGLLKDMKKK--GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTI 377
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + + +EA+S+F+ L + C S+N++ + W
Sbjct: 378 LACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL-------------------WS 418
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++++L +++ EM +G PD +Y+ L+ LC D ++EA
Sbjct: 419 TGHKVRALGMIL-----------------EMLDKGVDPDGITYNSLISCLCRDGMVDEAI 461
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR--- 263
LL M S+ +V Y +L LC ++ DA+++L ++ KG + ++
Sbjct: 462 ELLVDMEMESSE--CKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFL 519
Query: 264 -HRIDLCPC-NDGEDIEGAKSLIN 285
I C ND D+ A +L+N
Sbjct: 520 IEGIGFGGCLNDARDL--ATTLVN 541
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 166/338 (49%), Gaps = 7/338 (2%)
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ ++ + + N ++ C+ AL + +M +GCYP ++++L+ GL L +
Sbjct: 231 YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L+ M ++ G Y L+ C +G + +A+ + E+++ +G+ + +
Sbjct: 291 AKGLIQEM----AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHN 346
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I C +G+ + A+ +++ L + +P + SY+ + G I E +LDE+R
Sbjct: 347 TIMYGFCKEGK-MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ ++V Y + L + G ++ AL+ ++E+M+ P V Y +L+ G C GN
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALK-LKEDMINRGIHPDVVTYTVLVNGACKLGNML 464
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+A + +M VG + Y + G + G +A ++ EEML + + P V TYNV
Sbjct: 465 MAKEFFDEML-HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVF 523
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ GLC +G EA L++MI +PD ++S + +
Sbjct: 524 VNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHA 561
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 200/469 (42%), Gaps = 43/469 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ IL + N + + EV M + + T + ++ + G++ A+ L + +
Sbjct: 208 ILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERG 267
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C +FN L+ + K+ +L+ A L ++ ++ + N L+ C+ A
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGL-IQEMAKAGLRVSPYTYNPLICGYCKKGLLVEA 326
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L +++EM +G P S++ +M G C + ++++A L M +K DI+ Y T
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDML----KKNLMPDIISYNT 382
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L++ C G I +A +L+++ + L + + C G D+E A L + + R
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG-DLETALKLKEDMINR 441
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +Y+ + G ++ + DEM G P Y A++ K G +A
Sbjct: 442 GIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKA 501
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ EE + KG F P V YN+ + GLC GN A L+KM + G V + TY +
Sbjct: 502 FKLQEEMLTKG-FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD-GHVPDHVTYTSFM 559
Query: 411 DGLCRDGRFLEASRVLEEMLIR--------------------------SYW--------- 435
+G E + +ML R +Y+
Sbjct: 560 HAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVV 619
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TYNVLI G C + K +A + EM + P+ ++ L+ C
Sbjct: 620 PNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I LS+ + + K +I +M + I Y + G L EA++L++ +
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM 333
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S NT++ KE K+ A L + I S N L+ C+
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQ-LSDMLKKNLMPDIISYNTLIYGFCRLGN 392
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + E+ F+ + +Y+ L+ GLC L A L M R G D+V
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINR----GIHPDVV 448
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C G + A + +++L GL AP + + D A L E
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGL-APDQFAYTARIVGELKLGDTAKAFKLQEE 507
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +G P + +Y+ L G + E ++L +M G P V Y + + A ++G
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ E E+ + + +G PTV Y +L+ G A+ Y +M ++ G V N TY
Sbjct: 568 LREGREIFYDMLSRGQ-TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEK-GVVPNVITY 625
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++G C+ + +A + EM + +P TY +LI C++GK EA+ +M+
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685
Query: 467 QAKLPDISVWSSLV 480
+ PD +L+
Sbjct: 686 KRIRPDSCTHGALL 699
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 166/347 (47%), Gaps = 11/347 (3%)
Query: 138 FLRSCYGWEVKSRIQSLNL--LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
++S Y W V RI S + ++DVL + L VF++M PD ++ + ++K
Sbjct: 154 LMKSAY-W-VMERIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKI 211
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L + L +A + Y M + + G + Y T+L + C G++Q A+ ++ K+ +G
Sbjct: 212 LRDKNLLVKALEV-YRM---MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERG 267
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + + + +++ AK LI E G S +Y+ + +G +VE
Sbjct: 268 C-YPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEA 326
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ +EM T+G P++ + + K+G + +A + + + M+K +P + YN L+
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSD-MLKKNLMPDIISYNTLIY 385
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C GN A + L ++ + N TY L+DGLCR G A ++ E+M+ R
Sbjct: 386 GFCRLGNIGEAFILLDELRFR-NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIH 444
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
P V TY VL+ G C +G A + +EM+ PD +++ +
Sbjct: 445 PDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 283 LINEALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ E ++R +P + + + + L ++ +V+ +V M G P++ Y L +
Sbjct: 188 LVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSF 247
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G V AL+++ + +G + P+ +N+L+ GL G A +++M+K G
Sbjct: 248 CKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAK-AGLRV 305
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY L+ G C+ G +EA + EEM+ R P V ++N ++ G C GK +A L
Sbjct: 306 SPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL 365
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+M+ + +PDI +++L+ C
Sbjct: 366 SDMLKKNLMPDIISYNTLIYGFC 388
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +LM C R DL + +G D ++ ++KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVL-TSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ P+ V+S L+ +
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 9/394 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + + +F +LK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A + EM+ + D ++S++ S C
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V + T I + + G L++A +
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + ++++++ + K ++ A + L S V ++ N ++ C
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKA-MEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ ++M G PD +Y+ LM LC + R EA MF ++++G +I
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR----KMFDSMTKRGLKPEI 339
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TLL +G + + +L+ ++R G+ P I +C ++ A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIH-PNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + L GR+ + + ++M + P ++Y + + +L
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D+A E+I E + +G + T+ +N ++ C G + L + ++G + T
Sbjct: 459 KWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDIIT 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C G+ EA+++L M+ P TYN LI G C I + +A++ EM
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 466 SQAKLPDISVWS 477
S PDI ++
Sbjct: 577 SSGVSPDIITYN 588
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 208/475 (43%), Gaps = 55/475 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S+I L ++ + + EV+ M + + + + Y +GQ EA+
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCYG-----WEVK 148
K + ++N+L+ + K + A +F + YG + K
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 149 SRIQSLNLLMDVLCQ--------------CR-----RSDLALHVFQEMDFQGCYPDRESY 189
+ ++ L+D++ + C + D A+ VF +M QG PD +Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A M I ++ S +IV Y +L+ +LC K A +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQM---IDERLSPGNIV-YNSLIHSLCIFDKWDKAKELIL 468
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN 308
++L +G+ + I C +G IE K + + ++R G+ P + +YS + ID Y
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK--LFDLMVRIGVKPDIITYSTL-IDGYC 525
Query: 309 -EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ E K+L M + G P V Y + K +++AL V+ EM P +
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL-VLFREMESSGVSPDI 584
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-----ETYGILVDGLCRDGRFLEA 422
YNI+L+GL +A A K++ VG +G TY I++ GLC++ EA
Sbjct: 585 ITYNIILQGLFQTRRTAAA----KEL--YVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+ + + + T+N++I L +G+ EA + + +PD+ +S
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TY+ +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 192/496 (38%), Gaps = 52/496 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K A K+F ++ + Y +++ + + EM
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKGALVEMH 359
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++D M + VF+ I YA+ G++++A+ +F + Q T ++ T++ +
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNL----LMDVLCQCRRSDLALHVFQEMDFQG 181
K ++E A F + + R+ N+ L+ LC + D A + EM +G
Sbjct: 420 CKSGRVEDAMRYFEQM-----IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D ++ ++ C + R+ E+ L + + RI K DI+ Y TL+ C GK+
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVRIGVK---PDIITYSTLIDGYCLAGKM 530
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L ++ G+K P + + +E A L E G P + +Y+
Sbjct: 531 DEATKLLASMVSVGMK-PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE----- 356
+ L+ R ++ + G L Y L L K+ + DEAL + +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 357 -EMVKGTF----------------------------VPTVRVYNILLKGLCDAGNSAVAV 387
++ TF VP VR Y+++ + L + G
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M + GC AN +V L + G A L M+ ++ + L
Sbjct: 710 DLFLSMEEN-GCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLD 767
Query: 448 LCSIGKQYEAVMWLEE 463
L S GK E +L E
Sbjct: 768 LLSGGKYQEYHRFLPE 783
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 196/418 (46%), Gaps = 8/418 (1%)
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++ K + + K+ F R YA EA+ F+++ + +S L + +
Sbjct: 144 NESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRG 203
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
++++ + F R +V+ + SL +++D LC+ ++ + E+ +G + +
Sbjct: 204 GQVDSC-LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVT 262
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++G L +L M ++G ++V Y L+ + GKI++A ++
Sbjct: 263 YNAFIEGYFKRLDLGGVAEILTLM----EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
E++ KG++A I C C G +++ A L +E +G IPS +Y A+ +
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSG-NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G++ +++EM+ KG + V++ + + GMVDEAL ++ M K V
Sbjct: 378 AGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR-LQVVMEKKGLESDVF 436
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN + GLC A L M ++ G N ++ L+D C++G F+EA RV E
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVER-GVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 495
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
M + P + TYNVLI G G EA +E+ ++ +PD+ +SL+ C +
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID 553
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 54/331 (16%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ C CR ++ AL +F EM +G P +Y L+ G+C ++ A L+ M
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM----- 391
Query: 218 QKGSGEDI--VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCND 273
+G G D+ VI+ TL+ C+ G + +A+++ + +KGL++ + I LC N
Sbjct: 392 -QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 450
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLV 332
++ AK L+ + RG P+ S++ + ID+Y EG VE +V EM KG
Sbjct: 451 KDE---AKGLLFSMVERGVSPNTMSFTTL-IDIYCKEGNFVEAKRVFREMEEKGN----- 501
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
VP + YN+L+ G GN A LK
Sbjct: 502 -------------------------------VPNIITYNVLIDGYSKRGNMKEA-HKLKD 529
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ G + + T L+ G C DG+ A ++ +EM R P V TY +I GL G
Sbjct: 530 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 589
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ EA +EM PD +V+SSLV S+
Sbjct: 590 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 157/337 (46%), Gaps = 7/337 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I S +I E + + ++M+ E V+ + I R+G + A+ LF
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ + ++ L+ + K ++EAA +L + G + N L+D C+
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML-VNEMQGKGIDLNPVIFNTLIDGYCE 412
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D AL + M+ +G D +Y+ + GLC R +EA LL+SM R G
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER----GVSP 468
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ + + TL+ C +G +A ++ ++ KG P + + + + +++ A L
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG-NVPNIITYNVLIDGYSKRGNMKEAHKL 527
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+E RG IP + + +++ +G++ K+ DEM +G P++V Y A ++ L K
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
DG +EA ++ +EM + P VY+ L+ L A
Sbjct: 588 DGRSEEAFKLY-DEMKETGLTPDDTVYSSLVGSLHSA 623
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 191/427 (44%), Gaps = 10/427 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++I L + + + E+ D M C+ D + T I + G+ A LFK +
Sbjct: 47 TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM 106
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C +++TL+ + K ++ A +F ++ I + L+ LC R
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF-SYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + EM P+ ++++L+ C + ++ A +L +M ++ G D+V
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM----TEMGVEPDVV 221
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L++ ++ +A ++ + ++ KG K P + I + + I+ AK L NE
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCK-PDVFSYSILINGYCKAKRIDEAKQLFNE 280
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G P+ SY+ + L GR+ E + M T G P+L Y L K G
Sbjct: 281 MIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGY 340
Query: 347 VDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A + ++ T++ P + +YNIL+ +C +GN A ++ +G N +
Sbjct: 341 LGKAFRLFRA--MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF-VIGLQPNVQI 397
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y +++GLC++G EA M P +YNV+IRG + AV + EM
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Query: 466 SQAKLPD 472
+ + D
Sbjct: 458 DRGFITD 464
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 169/403 (41%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I + G+ +AV LF ++ C ++ T++ + K + A LF +
Sbjct: 47 TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLF-KK 105
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + L+ LC+ RR + AL +F M + P +Y L++GLCN R
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA+ LL M + ++V + L+ C +GK+ A +L+ + G++
Sbjct: 166 WKEASALLNEM----TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE---- 217
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P + +Y+++ +VE K+ D
Sbjct: 218 --------------------------------PDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M TKG P + Y + K +DEA ++ E + +G+ P YN L+ GLC G
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS-TPNNVSYNTLIHGLCQLG 304
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K M G + N TY IL+DG C+ G +A R+ M P + Y
Sbjct: 305 RLREAQDLFKNMHTN-GNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N+L+ +C G +A E+ P++ ++++++ +C
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 42/338 (12%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ I + L++ L + + A+ +F +M +GC PD +Y ++ GLC ++ E T
Sbjct: 41 LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC---KIGE-T 96
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L +F ++ + G ++V Y TL+ +LC ++ +A+ I + K +
Sbjct: 97 ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDIS--------- 147
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
P++ +Y+++ L N R E +L+EM +
Sbjct: 148 ---------------------------PTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V + + K+G V A E + + M + P V YN L+ G V
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAA-EGVLKTMTEMGVEPDVVTYNSLMYGY-SMWTEVVE 238
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L + GC + +Y IL++G C+ R EA ++ EM+ + P +YN LI
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC +G+ EA + M + LP++ ++ L+ C
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
R+ G VL + G P++V + + L K G +A+E+ ++ + +G P Y
Sbjct: 25 RVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGC-QPDDYTY 83
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
++ GLC G +A+A KKM ++ GC N TY L+ LC+ R EA + M
Sbjct: 84 TTIINGLCKIGETALAAGLFKKM-EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK 142
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P + TY LI+GLC+ + EA L EM S +P++ ++ LV + C
Sbjct: 143 AKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFC 196
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 6/189 (3%)
Query: 29 KIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
K EAK+ + H G Y ++I L + R+ E +++ M + +
Sbjct: 269 KRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY 328
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
A + + + G L +A LF+ + +N L+ M K L+ A LF +
Sbjct: 329 AILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELF-SELF 387
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
++ +Q +++ LC+ D AL F+ M+ GC PD SY+++++G + +
Sbjct: 388 VIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDES 447
Query: 204 EATHLLYSM 212
A HL+ M
Sbjct: 448 RAVHLIGEM 456
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G N T IL++ C+ R VL + + P + T+ LI GL +GK +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
V ++M+++ PD +++++ +C
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLC 91
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 198/454 (43%), Gaps = 53/454 (11%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ + P AL +F + + +RH+ P Y++++ L+ S R ++ V+ ++ +
Sbjct: 55 VKEVEDPDKALSLFHDYLQN--GFRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVR 112
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C+D++F Y + G + +A+ LF ++ FNC+ QSFN LL +V +L A L
Sbjct: 113 CRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQL 172
Query: 138 FLRSCYGWEVKSRIQS--LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
F RS E+ R+ S N+L+ + A VF EM + P +Y+ L+
Sbjct: 173 FDRSS---EMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGY 229
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + L +A L M +KG + V Y L+ LC G+ ++A ++L
Sbjct: 230 LCRNGELGKAKGLFKDMI----KKGKRPNAVTYALLMEGLCSMGEYKEAKKMLF------ 279
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
D+E RG P ++ + DL +G+I E
Sbjct: 280 --------------------DME----------YRGCKPKNLNFGVLMNDLGKKGKIEEA 309
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+L EM+ + F P +V+Y + L K+G V EA + + E + G Y +L
Sbjct: 310 KLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGC-EANAATYRMLAD 368
Query: 376 GLCDAGNSAVAVMYLKKM--SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
G C G + L M S+ + ET+ V GL + G A VLEEM R
Sbjct: 369 GFCQVGEFEEGLKVLNAMLVSRHAPRI---ETFNCFVVGLMKSGSIDGAFFVLEEMEKRK 425
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ + L+R CS + +V+ E +I
Sbjct: 426 MALDSDGWEALVRCCCSEHRGAGSVLLCESLIRH 459
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 185/389 (47%), Gaps = 10/389 (2%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
++A+SLF + Q + S++ L+ ++ + + EA + L + V+ R
Sbjct: 62 DKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETV-LGYLQDFNVRCRDTLFIA 120
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L + + A+ +F EM C +S++ L+ L ++ RL +A L F R
Sbjct: 121 LFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQL----FDRS 176
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
S+ G + V + L+ +G+ A ++ +++L + ++ + + C +GE
Sbjct: 177 SEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGE- 235
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ AK L + + +G P+ +Y+ + L + G E K+L +M +G P + +
Sbjct: 236 LGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGV 295
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L K G ++EA +++ EM K F P V +YNIL+ LC G A A L +M Q
Sbjct: 296 LMNDLGKKGKIEEA-KLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEM--Q 352
Query: 397 VG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+G C AN TY +L DG C+ G F E +VL ML+ + P +ET+N + GL G
Sbjct: 353 IGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSID 412
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
A LEEM + D W +LV C
Sbjct: 413 GAFFVLEEMEKRKMALDSDGWEALVRCCC 441
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 261 SRRHRIDLCPCNDG---EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+RR R D+ N+ ED + A SL ++ L G SYSA+ L R +
Sbjct: 42 TRRQRRDIPFVNNVKEVEDPDKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVET 101
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
VL ++ ++ A K G+V +A+ + E M + T++ +N LL
Sbjct: 102 VLGYLQDFNVRCRDTLFIALFEHYGKVGLVAKAIRLFNE-MTGFNCIRTLQSFNALLN-- 158
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+LVD + R +A ++ + +
Sbjct: 159 ------------------------------VLVD----NDRLFDAKQLFDRSSEMGFRLN 184
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+N+LI+G G+ Y+A +EM+ + P + ++SL+ +C N
Sbjct: 185 SVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRN 233
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD+ + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVL-TSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G + G E L+ M+ P+ V+S L+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 9/394 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A + EM+ + D ++S++ S C
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V + T I + + G L++A +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + ++++++ + K ++ A + L S V ++ N ++ C
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKA-MEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ ++M G PD +Y+ LM LC + R EA MF ++++G +I
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR----KMFDSMTKRGLKPEI 339
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TLL +G + + +L+ ++R G+ P I +C ++ A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIH-PNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + L GR+ + + ++M + P ++Y + + +L
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D+A E+I E + +G + T+ +N ++ C G + L + ++G + T
Sbjct: 459 KWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDIIT 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C G+ EA+++L M+ P TYN LI G C I + +A++ EM
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 466 SQAKLPDISVWS 477
S PDI ++
Sbjct: 577 SSGVSPDIITYN 588
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 45/420 (10%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----------------------- 138
+ + ++Q C+ S+N LLK + E++ + A L
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 139 ------LRSCYG--WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L YG E+ R + + + ++ LC+ + D A+ V M G P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ ++ G C+ + EA L M G D+V Y +L+ LC G+ +A
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMH----SDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
++ + + ++GLK + + G +E L + ++R GI P+ +S +
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMVRNGIHPNHYVFSILIC 382
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+G++ + V +MR +G P V Y + L K G V++A+ E+M+
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF-EQMIDERLS 441
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P VYN L+ LC A + +M + C+ + + ++D C++GR +E+ +
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + M+ P + TY+ LI G C GK EA L M+S PD +++L+ C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 205/470 (43%), Gaps = 45/470 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S+I L ++ + + EV+ M + + + + Y +GQ EA+
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCYG-----WEVK 148
K + ++N+L+ + K + A +F + YG + K
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 149 SRIQSLNLLMDVLCQ--------------CR-----RSDLALHVFQEMDFQGCYPDRESY 189
+ ++ L+D++ + C + D A+ VF +M QG PD +Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A M I ++ S +IV Y +L+ +LC K A +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQM---IDERLSPGNIV-YNSLIHSLCIFDKWDKAKELIL 468
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN 308
++L +G+ + I C +G IE K + + ++R G+ P + +YS + ID Y
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK--LFDLMVRIGVKPDIITYSTL-IDGYC 525
Query: 309 -EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ E K+L M + G P V Y + K +++AL V+ EM P +
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL-VLFREMESSGVSPDI 584
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YNI+L+GL +A A +++ G TY I++ GLC++ EA R+ +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITES-GTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ + T+N++I L +G+ EA + + +PD+ +S
Sbjct: 644 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TY+ +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 175/448 (39%), Gaps = 50/448 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + + EM ++D M + VF+ I YA+ G++++A+ +F +
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL----LMDVLC 162
Q T ++ T++ + K ++E A F + + R+ N+ L+ LC
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM-----IDERLSPGNIVYNSLIHSLC 455
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ D A + EM +G D ++ ++ C + R+ E+ L + + RI K
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVRIGVK--- 511
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI+ Y TL+ C GK+ +A ++L ++ G+K P + + +E A
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLINGYCKISRMEDALV 570
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E G P + +Y+ + L+ R ++ + G L Y L L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 343 KDGMVDEALEVIEE------EMVKGTF----------------------------VPTVR 368
K+ + DEAL + + ++ TF VP VR
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y+++ + L + G M + GC AN +V L + G A L
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEEN-GCTANSRMLNSIVRKLLQRGDITRAGTYL-F 748
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYE 456
M+ ++ + L L S GK E
Sbjct: 749 MIDEKHFSLEASTASLFLDLLSGGKYQE 776
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 175/368 (47%), Gaps = 10/368 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ LL + K + A I LR+ + + + ++D LC+ + D A ++ E
Sbjct: 117 SYGILLNGLCKIGETRCA-IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSE 175
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +G +PD +Y L+ G C +L EA LL M K +I Y TL+ LC
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL----KNINPNIYTYNTLIDTLC 231
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPS 295
+GK++++ +L + +KG+K P + I + C GE ++ AK + + G P
Sbjct: 232 KEGKVKESKNLLAVMTKKGVK-PDVVIYSILMDGYCLVGE-VQKAKQIFLVMVQTGVNPD 289
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ SY+ + L R+ E +L EM K P V Y + + L K G + L++ +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E +G V YN LL GLC N A+ KM K+ G N TY L+DGLC+
Sbjct: 350 EMHHRGQPANLV-TYNSLLDGLCKNQNLDKAIALFMKM-KERGIQPNKYTYTALIDGLCK 407
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR + + + +L++ Y V TY V+I GLC G EA+ +M +P+
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT 467
Query: 476 WSSLVASV 483
+ ++ S+
Sbjct: 468 FEIIIRSL 475
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 199/445 (44%), Gaps = 10/445 (2%)
Query: 42 RHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
RH P+ + ++G L + + + QM+ + I + GQ+ +
Sbjct: 5 RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+ + + T NTL+K + + +++ + + F + S +L++
Sbjct: 65 FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS-LHFHDKVVAQGFQMDQVSYGILLN 123
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ + + ++ + PD Y ++ GLC D+ ++EA Y ++ ++ +
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA----YDLYSEMNAR 179
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D++ Y TL+ C G++ +A +L +++ K + + + C +G+ ++
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK-VKE 238
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
+K+L+ +G P + YS + G + + ++ M G P + Y +
Sbjct: 239 SKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K VDEA+ ++ E M+ +P Y+ L+ GLC G + K+M + G
Sbjct: 299 GLCKGKRVDEAMNLLRE-MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR-GQ 356
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
AN TY L+DGLC++ +A + +M R P TY LI GLC G+ +
Sbjct: 357 PANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQA 416
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+ ++ + D+ ++ +++ +C
Sbjct: 417 LFQHLLVKGYCIDVWTYTVMISGLC 441
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 7/334 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+L++L++ C + + V ++ G P+ + LMKGLC + ++ H
Sbjct: 47 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHF---- 102
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++ +G D V Y LL LC G+ + A+++L I + + I C
Sbjct: 103 HDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCK 162
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D + ++ A L +E RG P + +Y+ + G+++E +L+EM K P++
Sbjct: 163 D-KLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY 221
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L K+G V E+ ++ M K P V +Y+IL+ G C G A
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAV-MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLV 280
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M Q G + +Y I+++GLC+ R EA +L EML ++ P TY+ LI GLC +G
Sbjct: 281 MV-QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ + +EM + + ++ ++SL+ +C N
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD+ + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTS-MVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ P+ V+S L+ +
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 164/380 (43%), Gaps = 14/380 (3%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 I-----GKQYEAVMWLEEMI 465
K Y W+E +
Sbjct: 457 FDKWDKAKDYFLKCWIEAFV 476
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 22/321 (6%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE---DIV 226
A HVF E+ +G S + L L + R + A + S + R+++ G+ E ++
Sbjct: 38 ARHVFDELLRRG---RGASIYGLNCALADVARHSPAAAV--SRYNRMARAGADEVTPNLC 92
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-----CNDGEDIEGAK 281
Y L+ + C G++ L +++KG R I P C D +
Sbjct: 93 TYGILIGSCCCAGRLDLGFAALGNVIKKGF-----RVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--WPSLVMYEAKLA 339
++ G IP++ SY+ + L +E R E ++L M G P +V Y +
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
FK+G +D+A E + +G +P V Y+ ++ LC A A+ L M K G
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRG-ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GV 265
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ N TY +V G C G+ EA L++M P V TYN L+ LC G+ EA
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 460 WLEEMISQAKLPDISVWSSLV 480
+ M + P+I+ + +L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLL 346
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TY+ +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S+I L ++ + + EV+ M + + + + Y +GQ EA+ K +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N+L+ + K + A +F S +K I + L+ +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYAT-KG 353
Query: 167 SDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ + +H + M G +P+ + IL+ ++++A + F ++ Q+G D
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV----FSKMRQQGLNPDT 409
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
V Y T++ LC G+++DAM+ E+++ + L
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 209/445 (46%), Gaps = 15/445 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ LS+++ + + D M D + +R G EA+S+ +++
Sbjct: 126 YNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMR 184
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++NTL+ + +++ A L G +K + + N +++ +C+ R
Sbjct: 185 GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG-LKPNLVTFNSVVNGICKAGRM 243
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A VF EM +G PD SY+ L+ G C +H S+F +++KG D+V
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCK----VGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG--EDIEGAKSLIN 285
+ +L+ +C G ++ A+ ++ ++ +GL+ + + C G +D A +
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ I+ PS+ Y+A+ GR+ E +++ EM KG P +V Y L+A K+G
Sbjct: 360 QCRIQ---PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
A + + ++M++ +P Y+ L++ LC+ A + K M +G + T
Sbjct: 417 DTHSAFQ-LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMI-SLGLQPDEVT 474
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C++G A + +EM+ P V TY+VLI GL + EA L ++
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534
Query: 466 SQAKLPDISVWSSLVASVCCNTADL 490
+ +P + +L+ CC A+L
Sbjct: 535 HEEPVPANIKYDALMR--CCRNAEL 557
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 189/483 (39%), Gaps = 91/483 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S++ + ++ R+ + ++V D+M + + T + Y + G +EA+S+F +
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ + +F +L+ M K LE A + +R ++ + L+D C+
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERA-VGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL +EM P Y+ L+ G C R++EA L+ M KG D+V
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM----EAKGVKPDVV 403
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+L A C G A Q+ +++L G+
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGV------------------------------ 433
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+P +YS++ L E R+ + + M + G P V Y + + K+G
Sbjct: 434 ------LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN---- 402
V+ AL + +EMVK +P V Y++L+ GL + + A L K+ + AN
Sbjct: 488 VERALS-LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYD 546
Query: 403 ---------------------------------------------GETYGILVDGLCRDG 417
G Y +L+ G CR+G
Sbjct: 547 ALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREG 606
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
++A ++ML + P + LIRGL G EA ++++++ L D
Sbjct: 607 NVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASK 666
Query: 478 SLV 480
+L+
Sbjct: 667 ALI 669
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 194/452 (42%), Gaps = 23/452 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + + + ++D M+ + F + + +AG++ +A +F
Sbjct: 191 NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + S+NTL+ K A +F + + + L+ V+C+
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG-IMPDVVTFTSLIHVMCK 309
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSG 222
+ A+ + +EM +G + ++ L+ G C L++A + M RI
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS--- 366
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+V Y L+ C G++ +A +++ ++ KG+K I C +G D A
Sbjct: 367 --VVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG-DTHSAFQ 423
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + L G +P +YS++ L E R+ + + M + G P V Y + +
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ------ 396
K+G V+ AL + +EMVK +P V Y++L+ GL + + A L K+ +
Sbjct: 484 KEGNVERALS-LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542
Query: 397 ------VGCVANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ C N E + L+ G C G EA +V + +L R++ Y+VLI G
Sbjct: 543 IKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
C G +A+ + ++M+ P+ + SL+
Sbjct: 603 CREGNVMKALSFHKQMLQCGFAPNSTSTISLI 634
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 3/194 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G PS+ +Y+A+ + L ++ + + D M + G P++ Y + AL G EA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L V+ + M P YN L+ C AG A L M ++ G N T+ +V
Sbjct: 177 LSVLRD-MRGAGCDPNAVTYNTLVAAFCRAGEVDRA-ERLVDMMREGGLKPNLVTFNSVV 234
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+G+C+ GR +A +V +EM+ P +YN L+ G C +G +EA+ EM + +
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294
Query: 471 PDISVWSSLVASVC 484
PD+ ++SL+ +C
Sbjct: 295 PDVVTFTSLIHVMC 308
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 196/418 (46%), Gaps = 8/418 (1%)
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++ K + + K+ F R YA EA+ F+++ + +S L + +
Sbjct: 148 NESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRG 207
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
++++ + F R +V+ + SL +++D LC+ ++ + E+ +G + +
Sbjct: 208 GQVDSC-LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVT 266
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++G L +L M ++G ++V Y L+ + GKI++A ++
Sbjct: 267 YNAFIEGYFKRLDLGGVAEILTLM----EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
E++ KG++A I C C G +++ A L +E +G IPS +Y A+ +
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSG-NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G++ +++EM+ KG + V++ + + GMVDEAL ++ M K V
Sbjct: 382 AGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR-LQVVMEKKGLESDVF 440
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN + GLC A L M ++ G N ++ L+D C++G F+EA RV E
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVER-GVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 499
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
M + P + TYNVLI G G EA +E+ ++ +PD+ +SL+ C +
Sbjct: 500 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID 557
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 54/331 (16%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ C CR ++ AL +F EM +G P +Y L+ G+C ++ A L+ M
Sbjct: 341 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM----- 395
Query: 218 QKGSGEDI--VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCND 273
+G G D+ VI+ TL+ C+ G + +A+++ + +KGL++ + I LC N
Sbjct: 396 -QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 454
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLV 332
++ AK L+ + RG P+ S++ + ID+Y EG VE +V EM KG
Sbjct: 455 KDE---AKGLLFSMVERGVSPNTMSFTTL-IDIYCKEGNFVEAKRVFREMEEKGN----- 505
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
VP + YN+L+ G GN A LK
Sbjct: 506 -------------------------------VPNIITYNVLIDGYSKRGNMKEA-HKLKD 533
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ G + + T L+ G C DG+ A ++ +EM R P V TY +I GL G
Sbjct: 534 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 593
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ EA +EM PD +V+SSLV S+
Sbjct: 594 RSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 7/340 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I S +I E + + ++M+ E V+ + I R+G + A+ LF
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ + ++ L+ + K ++EAA +L + G + N L+D C+
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML-VNEMQGKGIDLNPVIFNTLIDGYCE 416
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D AL + M+ +G D +Y+ + GLC R +EA LL+SM R G
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER----GVSP 472
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ + + TL+ C +G +A ++ ++ KG P + + + + +++ A L
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG-NVPNIITYNVLIDGYSKRGNMKEAHKL 531
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+E RG IP + + +++ +G++ K+ DEM +G P++V Y A ++ L K
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
DG +EA ++ +EM + P VY+ L+ L A S
Sbjct: 592 DGRSEEAFKLY-DEMKETGLTPDDTVYSSLVGSLHSADES 630
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 206/485 (42%), Gaps = 50/485 (10%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N R NG Y+ +I S R+ D+M D + + I + G L+ A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
SLF ++ +F +L+ K+ +++ A L+ + + + + L+
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG-ITPNVYTFTALIS 513
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC + A +F E+ + P +Y++L++G C D ++++A LL M QK
Sbjct: 514 GLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM----HQK 569
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D YR L+ LC G++ A ++ + ++ +K + + C +G +E
Sbjct: 570 GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLME- 628
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK-----VLDEMRTKGFWPSLVMY 334
A S E + RG L ++ + +G + + D+ +L +M +G P V+Y
Sbjct: 629 ALSASCEMIQRGINMDLVCHAVLI-----DGALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM- 393
+ + K+G +A E + + + F P V Y L+ GLC AG A + K+M
Sbjct: 684 TSMIDTYSKEGSFKKAFECWDLMVTEECF-PNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742
Query: 394 -------SKQVGC-------------------------VANGETYGILVDGLCRDGRFLE 421
S GC +AN T+ I++ G C+ GRF E
Sbjct: 743 AANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHE 802
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A++VL EM +P TY+ LI C G +V + M+++ PD+ ++ L+
Sbjct: 803 ATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIY 862
Query: 482 SVCCN 486
C N
Sbjct: 863 GCCVN 867
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 204/477 (42%), Gaps = 52/477 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++I L + + + + + M + ++ I ++ R+G+L+ A+S F +
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-------------------SCYGWEV 147
Q ++N+L+ K L AA LF+ C +V
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486
Query: 148 KSRIQSLNLLMDV---------------LCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ + N ++D LC + A +F E+ + P +Y++L
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++G C D ++++A LL M QKG D YR L+ LC G++ A ++ +
Sbjct: 547 IEGYCRDGKIDKAFELLEDM----HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
++ +K + + C +G +E A S E + RG L ++ + +G +
Sbjct: 603 KQNVKLNEMCYSALLHGYCQEGRLME-ALSASCEMIQRGINMDLVCHAVLI-----DGAL 656
Query: 313 VEGDK-----VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ D+ +L +M +G P V+Y + + K+G +A E + + + F P V
Sbjct: 657 KQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF-PNV 715
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y L+ GLC AG A + K+M + N TYG +D L ++G EA +
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRM-QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHH 774
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML + T+N++IRG C +G+ +EA L EM PD +S+L+ C
Sbjct: 775 AML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 216/528 (40%), Gaps = 60/528 (11%)
Query: 9 LTPTYLSQIIKKQ-KSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN-------- 59
L P ++ Q++ AL+ F + N H+ YA M+ L S
Sbjct: 67 LRPHHVEQVLMNTLDDAKLALRFFNFLG-LHKNMNHSTTSYAIMVHALVHSRLFWPANSL 125
Query: 60 ------RITEMKEVIDQMKGDSCECKDSV---FATAIRTYARAGQLNEAVSLFKNLSQFN 110
R + K V CK S F ++ Y + ++ +AV + K + N
Sbjct: 126 LHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANN 185
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ ++ + LL ++K K LF S V+ + + ++ +C+ + A
Sbjct: 186 LLPEVRTLSALLNGLLKVRKFITVWELFDESVNAG-VRPDPYTCSAVVRSMCELKDFLRA 244
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ M+ G +Y++L+ GLC R++EA + S+ KG D+V Y T
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSL----GGKGLAADVVTYCT 300
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C + + +Q++++++ G ++ + G+ I+ A L+ +
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGK-IDDAYELVVKVGRF 359
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G +P+L Y+A+ L G + + + + M P+ + Y + + + G +D A
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQV------------ 397
+ + M++ TV YN L+ G C G+ SA ++++ +K V
Sbjct: 420 ISYFDR-MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 398 ---------------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
G N T+ L+ GLC + EAS + +E++ R P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYNVLI G C GK +A LE+M + +PD + L++ +C
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLC 586
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 210/506 (41%), Gaps = 42/506 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P ++ +++ TA++ + A+ + P + H+ A ++ +L + E +
Sbjct: 85 LDPFVVNLVVRGLSDSETAVRFYWWAESR-PGFDHSQFAIAYIVSLLFVDGNFALLSEFL 143
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++ S++ + Y RAG+ + + F + C + +N + ++K
Sbjct: 144 GTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKN 203
Query: 129 SKLEAAHILFLRS-----CYGWEVKSR-----------------------------IQSL 154
+ + + C SR I +
Sbjct: 204 CCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWAC 263
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+ +D LC+ R AL + ++M +G PD +Y ++ LCN++R +EA L M
Sbjct: 264 NIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV- 322
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G D+V L+F LC K+++A ++ ++L ++ S + + G
Sbjct: 323 ---KMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAG 379
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
I+ A ++I+ G P + +Y+ + G + + + ++ +M T G P Y
Sbjct: 380 S-IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSY 438
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
L L K +D+A + + M G F V NIL+ C A+ K+M
Sbjct: 439 NQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSC-NILIDAFCKVKKVKSALELFKEMD 497
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G A+ TYG L++GL G + A + E+ML P V YN+++ LC +G
Sbjct: 498 YK-GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDL 556
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
A MI + LPDI +++L+
Sbjct: 557 KRAQKIFLHMIQKEILPDIVTYNTLI 582
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 36/353 (10%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL------------ 208
LC +R A+ +++EM G PD + L+ GLC + ++ EA L
Sbjct: 305 LCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELS 364
Query: 209 ------LYSMFWR-------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
L S FWR + G +V Y LL C G ++ A ++
Sbjct: 365 VSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLIT 424
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
K+ G+ + +++ C + ++ A + +++ + GG + S + +
Sbjct: 425 KMETSGVNPDRYSYNQLLKGLCKTHQ-LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKV 483
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
++ ++ EM KG V Y + LF G + A E+ E+ M+K P V +
Sbjct: 484 KKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQ-MLKAQIDPNVNL 542
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YNI+L LC G+ A ++L + K++ + + TY L+ L ++ R +EA + ++
Sbjct: 543 YNIMLHHLCKVGDLKRAQKIFLHMIQKEI--LPDIVTYNTLIYWLGKNSRAMEALDLFKD 600
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
M + P T+ LI GL G+ A E M+ + D V L++
Sbjct: 601 MRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLIS 653
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 125/315 (39%), Gaps = 41/315 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I + I + +I M+ + CE + + Y G + +A +L +
Sbjct: 367 IYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKM 426
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+N LLK + K +L+ A F+ I S N+L+D C+ ++
Sbjct: 427 ETSGVNPDRYSYNQLLKGLCKTHQLDKA-FAFVSDHMEVGGFCDIVSCNILIDAFCKVKK 485
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
AL +F+EMD++G D +Y L+ GL + N A L M + ++
Sbjct: 486 VKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQML----KAQIDPNVN 541
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y +L LC G ++ A +I +++K +
Sbjct: 542 LYNIMLHHLCKVGDLKRAQKIFLHMIQKEI------------------------------ 571
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+P + +Y+ + L R +E + +MRTKG P + ++ + L +G
Sbjct: 572 ------LPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGR 625
Query: 347 VDEALEVIEEEMVKG 361
A EV E M G
Sbjct: 626 STLAYEVWEYMMENG 640
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ R+ + +++++MR KG P +V Y + L + EA+ + EEMVK P V
Sbjct: 273 QNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG-LWEEMVKMGLKPDVV 331
Query: 369 VYNILLKGLCDAGNSAVAVMY-LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
L+ GLC NS V + L + + Y L+ G R G +A ++
Sbjct: 332 ACGALIFGLCK--NSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIIS 389
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M P V TYN+L+ C+IG +A + +M + PD ++ L+ +C
Sbjct: 390 FMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLC 446
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+KG + Y ++AL + + E +E + +M + F P + NI + LC
Sbjct: 218 SKGLCLTPFTYSRWISALCQSNRI-ELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRL 276
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A+ ++KM + G + + TY +V LC + RF EA + EEM+ P V
Sbjct: 277 HDALQMVEKMRGK-GTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGA 335
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
LI GLC K EA M+S +S++++L++
Sbjct: 336 LIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALIS 373
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DEM G + Y + L K+ D + + KG T Y+ + LC
Sbjct: 178 FDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKG-LCLTPFTYSRWISALC 236
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ + L M + G + I +D LC+ R +A +++E+M + P V
Sbjct: 237 QSNRIELVEELLADMDR-FGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDV 295
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
TY ++ LC+ + EAV EEM+ PD+ +L+ +C N+
Sbjct: 296 VTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNS 344
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD+ + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVL-TSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ P+ V+S L+ +
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V + T I + + G L++A +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + ++N+++ + K ++ A + L S V ++ N ++ C
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKA-MEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ ++M G PD +Y+ LM LC + R EA MF ++++G +I
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR----KMFDSMTKRGLKPEI 339
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TLL +G + + +L+ ++R G+ P I +C ++ A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIH-PNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + L GR+ + + ++M + P ++Y + + +L
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D+A E+I E + +G + T+ +N ++ C G + L + ++G N T
Sbjct: 459 KWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPNIIT 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C G+ EA+++L M+ P TYN LI G C I + +A++ EM
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 466 SQAKLPDISVWS 477
S PDI ++
Sbjct: 577 SSGVSPDIITYN 588
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 9/394 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A + EM+ + D ++S++ S C
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 173/378 (45%), Gaps = 14/378 (3%)
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+C S+ T++ KE L+ A+ + + + + N ++ LC+ + D
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTY-HEMLDRGILPNVVTYNSIIAALCKAQAMDK 252
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ V M G P+ +Y+ ++ G C+ + EA L M G D+V Y
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM----HSDGVEPDVVTYN 308
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ LC G+ +A ++ + + ++GLK + + G +E L + ++
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMV 366
Query: 290 RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R GI P+ +S + +G++ + V +MR +G P V Y + L K G V+
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A+ E+ M+ P VYN L+ LC D + A ++ L+ + + G + +
Sbjct: 427 DAMRYFEQ-MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI-LEMLDR--GICLDTIFF 482
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++D C++GR +E+ ++ + M+ P + TY+ LI G C GK EA L M+S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 467 QAKLPDISVWSSLVASVC 484
PD +++L+ C
Sbjct: 543 VGMKPDCVTYNTLINGYC 560
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 205/475 (43%), Gaps = 55/475 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y S+I L ++ + + EV+ M + + + + Y +GQ EA+
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCY-----GWEVK 148
K + ++N+L+ + K + A +F + Y G+ K
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 149 SRIQSLNLLMDVLCQ--------------CR-----RSDLALHVFQEMDFQGCYPDRESY 189
+ ++ L+D++ + C + D A+ VF +M QG PD +Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A M G+ ++Y +L+ +LC K A +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGN----IVYNSLIHSLCIFDKWDKAKELIL 468
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN 308
++L +G+ + I C +G IE K + + ++R G+ P++ +YS + ID Y
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK--LFDLMVRIGVKPNIITYSTL-IDGYC 525
Query: 309 -EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ E K+L M + G P V Y + K +++AL V+ EM P +
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL-VLFREMESSGVSPDI 584
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-----ETYGILVDGLCRDGRFLEA 422
YNI+L+GL +A A K++ VG +G TY I++ GLC++ EA
Sbjct: 585 ITYNIILQGLFQTRRTAAA----KEL--YVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+ + + + T+N++I L +G+ EA + + +PD+ +S
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TYN +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 50/455 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + + EM ++D M + VF+ I YA+ G++++A+ +F +
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL----LMDVLC 162
Q T ++ T++ + K ++E A F + + R+ N+ L+ LC
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM-----IDERLSPGNIVYNSLIHSLC 455
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ D A + EM +G D ++ ++ C + R+ E+ L + + RI K
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVRIGVK--- 511
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+I+ Y TL+ C GK+ +A ++L ++ G+K P + + +E A
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLINGYCKISRMEDALV 570
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E G P + +Y+ + L+ R ++ + G L Y L L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 343 KDGMVDEALEVIEE------EMVKGTF----------------------------VPTVR 368
K+ + DEAL + + ++ TF VP VR
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y+++ + L + G M + GC AN +V L + G A L
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEEN-GCTANSRMLNSIVRKLLQRGDITRAGTYL-F 748
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
M+ ++ + L L S GK E +L E
Sbjct: 749 MIDEKHFSLEASTASLFLDLLSGGKYQEYHRFLPE 783
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 198/450 (44%), Gaps = 45/450 (10%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L+ ++ ++++Q+ P + F + ++R + + +I +L++ + ++
Sbjct: 61 FLSSEIVNDVMREQRRPELGFRFFIWTTRRR-SFR-SWVTHNLVIDMLAKDDGFDTYWKI 118
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
++++K + + F+ I YA++G +AV F + F C ++N++L MV+
Sbjct: 119 LEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQ 178
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ A ++ + +L++ LC+ ++D AL +F EM +G P+
Sbjct: 179 KEVFLLALAVY-NQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y I++ GLC +R ++ LL +M ++S G D + LL C G+I +A +
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTM--KVS--GCCPDSITCNALLDGFCKLGQIDEAFAL 293
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L+ ++G + + YS++ L+
Sbjct: 294 LQLFEKEGY------------------------------------VLGIKGYSSLIDGLF 317
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
R E + +M G P +V+Y + + GMVD AL ++ +M + P
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML-NDMTQRGLSPDT 376
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN L+KG CD G A ++SK C TY IL+ G+CR+G EA ++
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKN-DCFPTSCTYTILICGMCRNGLLDEARQIFN 435
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+M P + T+N LI GLC G+ EA
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 196/482 (40%), Gaps = 53/482 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F E +K N +Y ++ L ++ R ++ +++ MK C C DS+ A
Sbjct: 220 ALKMFDEMTQK--GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC-CPDSITCNA 276
Query: 87 I-RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + + GQ++EA +L + + V + +++L+ + + + + + R +
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ-EWCRKMFKA 335
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
++ + +L+ C+ D AL++ +M +G PD Y+ L+KG C+ L++A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
S+ IS+ Y L+ +C G + +A QI ++ G +
Sbjct: 396 R----SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID--------LYNEGRIVEGDK 317
+ C GE +E A+ L + I G PSL + D + R + +
Sbjct: 452 LIDGLCKAGE-LEEARHLFYKMEI-GKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFR 509
Query: 318 VLDEMRTKGFWPSLVMYE---------AKLAALFK---------DGMVDEALEVIEEEMV 359
VLD+M G PS +Y+ KL+ F DE L++ EE
Sbjct: 510 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 569
Query: 360 KGTFVPTVRV---------------YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
KG VR Y I L GLC A S A+ + K+ N
Sbjct: 570 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVL-KECQMDVNPP 628
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ +L++GLC+DG A + L + + N L+R L K A+ L M
Sbjct: 629 SCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 688
Query: 465 IS 466
S
Sbjct: 689 NS 690
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 136/330 (41%), Gaps = 15/330 (4%)
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
DV+ + RR +L F + + ++++++ L D + +W+I +
Sbjct: 69 DVMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDG--------FDTYWKILE 120
Query: 219 KGSGEDIVI----YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ +I I + L+ A G + A++ K+ G K P + L
Sbjct: 121 ELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCK-PDVFTYNSILHVMVQK 179
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
E A ++ N+ L P+ A++ + L G+ + K+ DEM KG P+ ++Y
Sbjct: 180 EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIY 239
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
L+ L + D+ ++ V G P N LL G C G A L+
Sbjct: 240 TIILSGLCQAKRTDDVHRLLNTMKVSGC-CPDSITCNALLDGFCKLGQIDEAFALLQLFE 298
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K+ G V + Y L+DGL R R+ E +M P V Y +LIRG C +G
Sbjct: 299 KE-GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ L +M + PD +++L+ C
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYNALIKGFC 387
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 133/333 (39%), Gaps = 43/333 (12%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ F +M GC PD +Y+ ++ + E L +++ ++ + + +
Sbjct: 150 AVESFGKMKDFGCKPDVFTYNSILHVMVQ----KEVFLLALAVYNQMLKLNYNPNRATFV 205
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
LL LC GK DA+++ +++ +KG+
Sbjct: 206 ILLNGLCKNGKTDDALKMFDEMTQKGIP-------------------------------- 233
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P+ Y+ + L R + ++L+ M+ G P + A L K G +DE
Sbjct: 234 ----PNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++ +G +V ++ Y+ L+ GL A + +KM K G + Y IL
Sbjct: 290 AFALLQLFEKEG-YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFK-AGIEPDVVLYTIL 347
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G C G A +L +M R P YN LI+G C +G +A E+
Sbjct: 348 IRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDC 407
Query: 470 LPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
P ++ L+ +C N L+ R+ Q+ +
Sbjct: 408 FPTSCTYTILICGMCRNGL-LDEARQIFNQMEN 439
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 17/343 (4%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
GW + + N L+ C+ + D+A +F +M +G D SY L++GLC R++
Sbjct: 5 GW--RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRID 62
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA L M D+ +Y L+ LC+ + ++ + +L ++ G + P +R
Sbjct: 63 EAVELFGEM--------DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWR-PSTRA 113
Query: 264 HR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ +D C + + E A+ ++ E +G P + + +A+ EGR+ + +VL+
Sbjct: 114 YAAVVDF-RCRERKAKE-AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 171
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ +G P++ Y A + +G V +A+ ++ + G P YN+L++G C G
Sbjct: 172 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN-PDAVTYNLLIRGQCIDG 230
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A L+ M G +A+ TY L++ LC+DGR +A + + + R P T+
Sbjct: 231 HIESAFRLLRLMEGD-GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 289
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N LI GLC GK A +LE+M+S PD +SS + +C
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 185/422 (43%), Gaps = 17/422 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F + I Y R Q++ A LF + S+ TL++ + + +++ A LF
Sbjct: 12 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF--- 68
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + L+ LC R + L + + M G P +Y ++ C +R+
Sbjct: 69 --GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 126
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA +L MF +KG +V ++ A C +G++ DA+++LE + +G K
Sbjct: 127 AKEAEEMLQEMF----EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + CN+G+ + A +L+N+ G P +Y+ + +G I ++L
Sbjct: 183 TYNALVQGFCNEGK-VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 241
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G Y A + AL KDG D+A + + +G P +N L+ GLC +G
Sbjct: 242 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG-IKPNAVTFNSLINGLCKSG 300
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ +A +L+KM GC + TY ++ LC+ E + EML + P Y
Sbjct: 301 KADIAWKFLEKMV-SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 359
Query: 442 NVLIRGLCSIGKQYEAV--MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
++I L + Y V W EM+S PD+ +++ + + C LN L +
Sbjct: 360 TIVIHKLLK-ERNYGLVARTW-GEMVSSGCNPDVVTYTTSMRAYCIE-GRLNEAENVLME 416
Query: 500 LS 501
+S
Sbjct: 417 MS 418
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 188/425 (44%), Gaps = 12/425 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
YA++I L E+ RI E E+ +M ++A ++ A + E + + + +
Sbjct: 48 YATLIEGLCEAGRIDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEEGLLMLRRMK 103
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T+++ ++ +E K + A + L+ + + + + +++ C+ R
Sbjct: 104 ELGWRPSTRAYAAVVDFRCRERKAKEAEEM-LQEMFEKGLAPCVVTCTAVINAYCKEGRM 162
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
AL V + M +GC P+ +Y+ L++G CN+ ++++A LL M G D V
Sbjct: 163 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM----RACGVNPDAVT 218
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ C G I+ A ++L + GL A + + + C DG + A SL +
Sbjct: 219 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR-TDQACSLFDSL 277
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
RG P+ +++++ L G+ K L++M + G P Y + + L K
Sbjct: 278 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 337
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
E L I E M++ P+ Y I++ L N + +M GC + TY
Sbjct: 338 QEGLSFIGE-MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS-GCNPDVVTYT 395
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ C +GR EA VL EM YN L+ G SIG+ AV L++M S
Sbjct: 396 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 455
Query: 468 AKLPD 472
A +P+
Sbjct: 456 ASVPN 460
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 192/498 (38%), Gaps = 62/498 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + YA+++ + E +E++ +M I Y + G++++A+
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLM 158
+ + + C ++N L++ E K+ A L +R+C V + NLL+
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC---GVNPDAVTYNLLI 223
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
C + A + + M+ G D+ +Y+ L+ LC D R ++A S+F +
Sbjct: 224 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC----SLFDSLET 279
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+G + V + +L+ LC GK A + LEK++ G C E
Sbjct: 280 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 339
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
G S I E L + PS +Y+ + L E + EM + G P +V Y +
Sbjct: 340 GL-SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 398
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS---- 394
A +G ++EA V+ E G V T+ YN L+ G G + AV LK+M+
Sbjct: 399 RAYCIEGRLNEAENVLMEMSKNGVTVDTM-AYNTLMDGHASIGQTDHAVSILKQMTSVAS 457
Query: 395 -----------------------------------------------KQVGCVANGETYG 407
K+ + N TY
Sbjct: 458 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 517
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++G DGR EA+ ++ M S + Y L+ C + +A + + MI
Sbjct: 518 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 577
Query: 468 AKLPDISVWSSLVASVCC 485
+P + + L++ + C
Sbjct: 578 GFIPQLMSYQHLLSGLIC 595
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/483 (19%), Positives = 188/483 (38%), Gaps = 58/483 (12%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++I + R+++ V++ MK C+ + ++ + G++++A++L +
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
++N L++ + +E+A L LR G + + + N L++ LC+ R+D
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNALINALCKDGRTD 268
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F ++ +G P+ +++ L+ GLC + + A L M G D Y
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV----SAGCTPDTYTY 324
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+ + LC Q+ + + ++L+K +K P + + I + + E +
Sbjct: 325 SSFIEHLCKMKGSQEGLSFIGEMLQKDVK-PSTVNYTIVIHKLLKERNYGLVARTWGEMV 383
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P + +Y+ EGR+ E + VL EM G + Y + G D
Sbjct: 384 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 443
Query: 349 EALEVIEEE--------------------------------------------------- 357
A+ ++++
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 503
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K F+P Y+ +L+G + G + A + M K+ N + Y LV C+
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM-KEDSISLNEDIYTALVTCFCKSK 562
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+L+A ++ M+ + P + +Y L+ GL G+ +A + PD VW
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 622
Query: 478 SLV 480
++
Sbjct: 623 VII 625
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 114/298 (38%), Gaps = 50/298 (16%)
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+M C + T++R Y G+LNEA ++ +S+ T ++NTL
Sbjct: 381 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL-------- 432
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
MD ++D A+ + ++M P++ +Y
Sbjct: 433 ----------------------------MDGHASIGQTDHAVSILKQMTSVASVPNQFTY 464
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWR---ISQKGSGEDIV----------IYRTLLFALC 236
IL++ L R + + L + W+ ++ D++ Y ++L
Sbjct: 465 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 524
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ G+ ++A ++ + + + + C C ++ A L+ + G IP L
Sbjct: 525 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPQL 583
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SY + L EG+ + ++ R K + P ++++ + L K G D + E+I
Sbjct: 584 MSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 641
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ SE R E ++ MK DS + ++ + + ++ + +A L
Sbjct: 512 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 571
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL-NLLMDVLC 162
++ Q + S+ LL ++ E + + A +F+ S W+ S + + +++D L
Sbjct: 572 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS--RWKDYSPDEIVWKVIIDGLI 629
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ SD++ + ++ C P ++Y +L + L
Sbjct: 630 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD+ + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVL-TSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G + G E L+ M+ P+ V+S L+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 9/394 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A + EM+ + D ++S++ S C
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V + T I + + G L++A +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + ++++++ + K ++ A + L S V ++ N ++ C
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKA-MEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ ++M G PD +Y+ LM LC + R EA MF ++++G +I
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR----KMFDSMTKRGLKPEI 339
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TLL +G + + +L+ ++R G+ P I +C ++ A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIH-PNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + L GR+ + + ++M + P ++Y + + +L
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D+A E+I E + +G + T+ +N ++ C G + L + ++G + T
Sbjct: 459 KWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDIIT 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C G+ EA+++L M+ P TYN LI G C I + +A++ EM
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 466 SQAKLPDISVWS 477
S PDI ++
Sbjct: 577 SSGVSPDIITYN 588
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 45/420 (10%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----------------------- 138
+ + ++Q C+ S+N LLK + E++ + A L
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 139 ------LRSCYG--WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L YG E+ R + + + ++ LC+ + D A+ V M G P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ ++ G C+ + EA L M G D+V Y +L+ LC G+ +A
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMH----SDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
++ + + ++GLK + + G +E L + ++R GI P+ +S +
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMVRNGIHPNHYVFSILIC 382
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+G++ + V +MR +G P V Y + L K G V++A+ E+M+
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF-EQMIDERLS 441
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P VYN L+ LC A + +M + C+ + + ++D C++GR +E+ +
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + M+ P + TY+ LI G C GK EA L M+S PD +++L+ C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 202/470 (42%), Gaps = 45/470 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S+I L ++ + + EV+ M + + + + Y +GQ EA+
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCYG-----WEVK 148
K + ++N+L+ + K + A +F + YG + K
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 149 SRIQSLNLLMDVLCQ--------------CR-----RSDLALHVFQEMDFQGCYPDRESY 189
+ ++ L+D++ + C + D A+ VF +M QG PD +Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A M G+ ++Y +L+ +LC K A +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGN----IVYNSLIHSLCIFDKWDKAKELIL 468
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN 308
++L +G+ + I C +G IE K + + ++R G+ P + +YS + ID Y
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK--LFDLMVRIGVKPDIITYSTL-IDGYC 525
Query: 309 -EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ E K+L M + G P V Y + K +++AL V+ EM P +
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL-VLFREMESSGVSPDI 584
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YNI+L+GL +A A +++ G TY I++ GLC++ EA R+ +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITES-GTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ + T+N++I L +G+ EA + + +PD+ +S
Sbjct: 644 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TY+ +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 175/448 (39%), Gaps = 50/448 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + + EM ++D M + VF+ I YA+ G++++A+ +F +
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL----LMDVLC 162
Q T ++ T++ + K ++E A F + + R+ N+ L+ LC
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM-----IDERLSPGNIVYNSLIHSLC 455
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ D A + EM +G D ++ ++ C + R+ E+ L + + RI K
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVRIGVK--- 511
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI+ Y TL+ C GK+ +A ++L ++ G+K P + + +E A
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLINGYCKISRMEDALV 570
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E G P + +Y+ + L+ R ++ + G L Y L L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 343 KDGMVDEALEVIEE------EMVKGTF----------------------------VPTVR 368
K+ + DEAL + + ++ TF VP VR
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y+++ + L + G M + GC AN +V L + G A L
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEEN-GCTANSRMLNSIVRKLLQRGDITRAGTYL-F 748
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYE 456
M+ ++ + L L S GK E
Sbjct: 749 MIDEKHFSLEASTASLFLDLLSGGKYQE 776
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 197/454 (43%), Gaps = 9/454 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI L + + + + QM+ + + I Y + G L E SLF +
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
CV ++N L+ K K+ A F +K + + + L+D C+
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYF-SEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L EA LL M Q G +IV
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML----QAGVKLNIV 406
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y LL LC G++ +A ++ +L+ G+ +P + + + E +E A ++ +
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGI-SPNQQVYTALVHGYIKAERMEDAMKILKQ 465
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P L Y ++ ++ ++ E +L+EM+++G + V+ + A FK G
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+AL +E G T+ Y +L+ GLC+AG +AV Y +M +G N Y
Sbjct: 526 SSDALNFFQEMQDVGV-EATIVTYCVLIDGLCEAGIVELAVDYFCRM-LSLGLQPNVAVY 583
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC + A ++ +EM R P + + LI G G EA++ + M
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
A D+ V++SLV+ +L+ RK ++
Sbjct: 644 LAIEFDLHVYTSLVSGF-SQCGELHQARKFFNEM 676
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 221/536 (41%), Gaps = 66/536 (12%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE---- 63
L P ++S+I+ ++ P ALK FK A + +RH Y ++ ++ + T+
Sbjct: 68 LAPIWVSKILLGLREDPKLALKFFKWAGSQV-GFRHTTESYCIIVHLVFRARMYTDAHDT 126
Query: 64 MKEVIDQMKGDS-----------------CECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+KEVI + D C VF + G L EA F +
Sbjct: 127 VKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM 186
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC---- 162
F + +S N LL + K + F G + + + N+++D LC
Sbjct: 187 RNFRTLPKARSCNFLLHRLSKSGNGQLVR-KFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245
Query: 163 ---------QCRRSDLALHV----------------------FQEMDFQGCYPDRESYHI 191
Q R L+ V F EM GC PD +Y+
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ C ++ A + F + G ++V Y TL+ A C +G +Q A+++L +
Sbjct: 306 LINCYCKFEKMPRA----FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
R GL + + C G E K L+N+ L G ++ +Y+A+ L GR
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWK-LLNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
++E ++V M G P+ +Y A + K +++A++++++ M + P + +Y
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ-MTECNIKPDLILYG 479
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++ G C + L++M K G AN ++D + G+ +A +EM
Sbjct: 480 SIIWGHCSQRKLEETKLILEEM-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 538
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+ TY VLI GLC G AV + M+S P+++V++SL+ +C N
Sbjct: 539 VGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNN 594
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 167/391 (42%), Gaps = 10/391 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + ++ E +MK + + ++T I + + G + A+ L ++
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++ +L+ K L A L L VK I + L+D LC+ R
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKL-LNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF+ M G P+++ Y L+ G R+ +A +L M ++ D++
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM----TECNIKPDLI 476
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y ++++ C Q K+++ ILE++ +G+ A I G+ + A + E
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD-ALNFFQE 535
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G ++ +Y + ID E IVE M + G P++ +Y + + L +
Sbjct: 536 MQDVGVEATIVTYCVL-IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNN 594
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++ A ++ +E +G P + + L+ G GN A++ + +M+ ++ +
Sbjct: 595 CIESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRMT-ELAIEFDLHV 652
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
Y LV G + G +A + EM+ + P
Sbjct: 653 YTSLVSGFSQCGELHQARKFFNEMIEKGILP 683
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 48/334 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ L ++ R+ E +EV M D V+ + Y +A ++ +A+ +
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLM 158
K +++ N + +++ + KLE ++ E+KSR S N ++
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL------EEMKSRGISANPVISTTII 517
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D + +S AL+ FQEM G +Y +L+ GLC L F R+
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE----AGIVELAVDYFCRMLS 573
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G ++ +Y +L+ LC I+ A ++ +++ +G+ DI
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP-----------------DIT 616
Query: 279 GAKSLINEALIRGGIP----------------SLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+LI+ L G + L Y+++ G + + K +EM
Sbjct: 617 AFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 676
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
KG P V+ L +K G +DEA+E+ E
Sbjct: 677 IEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 710
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 7/230 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+KI K+ E N + + +Y S+I ++ E K ++++MK + T
Sbjct: 459 AMKILKQMTE--CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y +AG+ ++A++ F+ + ++ L+ + + +E A F R
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRML-SLG 575
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + L+D LC + A +F EM +G PD ++ L+ G L EA
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
L+ R+++ D+ +Y +L+ G++ A + +++ KG+
Sbjct: 636 VLIS----RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 13/364 (3%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALHV 173
SFN ++ + K KL A + + W V + + N L+D C+ R A +
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDV-IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+EM +G P+ +Y+IL+ G C D ++ A + F + ++G ++V Y L+
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRV----FGEMQRQGLRPNVVTYNILIN 271
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC GK+ +A+ + ++++ L+ P H + + + + A +L N+ +G
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLE-PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330
Query: 294 PSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ +Y+ + ID Y +GR+ + + + M +G +P + Y +A L + G V A
Sbjct: 331 PNAMTYTTL-IDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++ E MV V YNIL+ LC G S AV L +M ++ G + TY L+DG
Sbjct: 390 LMNE-MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK-GLNPSHVTYNTLMDG 447
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
CR+G A V M + V T+NVLI+G C G+ +A L EM+ + +P+
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507
Query: 473 ISVW 476
+ +
Sbjct: 508 RTTY 511
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 28/424 (6%)
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCV 112
G++ ES +M+ V +M E F + + G+LN A + +++ +
Sbjct: 129 GLVKESEN-GDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187
Query: 113 NWTQSFNTLLK---EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
++NTL+ +M + K+ A + L+ + + N+L+D C+
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAI-LKEMVAKGICPNEVTYNILIDGFCKDENVSG 246
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ VF EM QG P+ +Y+IL+ GLC+D +++EA L M + ++V +
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP----NVVTHN 302
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C + +A+ + + ++G+ + C DG +E A +L N +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR-MEDAFALYNMMID 361
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P +++Y+ + L +G + +++EM +K +V Y + +L K G +
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+++++E KG P+ YN L+ G C GN A++ +M ++ G AN T+ +L
Sbjct: 422 AVKLLDEMFEKG-LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERK-GKQANVVTHNVL 479
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G C GR +A+ +L EML R P TY ++ EEM+ +
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII----------------KEEMMEKGF 523
Query: 470 LPDI 473
+PDI
Sbjct: 524 VPDI 527
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 227/492 (46%), Gaps = 30/492 (6%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQ--- 70
L Q++ P L+ F +++++ H+ + ++ L+ + + ++++ +D+
Sbjct: 2 LQQLLNSGADPELILRYFTWSQKEFK-LSHSLELTFRILNSLAHTKKYSKIRSFLDKFVK 60
Query: 71 ---------------MKGDSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNW 114
M GDS C +S+ A + + R ++ FK +
Sbjct: 61 YEKDYSVSAIFHAISMSGDSF-CVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLS 119
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
S N LL +VKES+ ++ R +++ + S N++++ LC+ + + A V
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVY-REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVI 178
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M G P+ +Y+ L+ G C R+ + + ++ + KG + V Y L+
Sbjct: 179 EDMKVWGVSPNVITYNTLIDGYCKMGRIGK-MYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI 293
C + AM++ ++ R+GL+ P + I + C+DG+ ++ A +L ++ +
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLR-PNVVTYNILINGLCSDGK-VDEAVALRDQMVSSDLE 295
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +++ + + E + ++M +G P+ + Y + A KDG +++A +
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDG 412
+ +G F P V YN L+ GLC G+ A + +M SK++ A+ TY IL+D
Sbjct: 356 YNMMIDRGIF-PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS--ADVVTYNILIDS 412
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+ G +A ++L+EM + P TYN L+ G C G A++ M + K +
Sbjct: 413 LCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQAN 472
Query: 473 ISVWSSLVASVC 484
+ + L+ C
Sbjct: 473 VVTHNVLIKGFC 484
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SL S + + L E + + V EM + +++ + + L K G ++ A +VI
Sbjct: 119 SLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVI 178
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY-----LKKMSKQVGCVANGETYGIL 409
E+ V G P V YN L+ G C G + MY LK+M + G N TY IL
Sbjct: 179 EDMKVWGV-SPNVITYNTLIDGYCKMGR--IGKMYKADAILKEMVAK-GICPNEVTYNIL 234
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DG C+D A RV EM + P V TYN+LI GLCS GK EAV ++M+S
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 470 LPDISVWSSLVASVCCN 486
P++ + L+ C N
Sbjct: 295 EPNVVTHNVLINGFCKN 311
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 17/408 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + + AG+ +EA L + +F + +L ++ + EA + +S
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRL---VEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKS 72
Query: 142 -CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + K S N L+D LC R A Q M +G P+R +Y+ + GL
Sbjct: 73 HLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAG 132
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L+EA L+ M G V + ++ LC G+ +A +++E +L + ++
Sbjct: 133 LLDEAFELMGVM----ESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNI 188
Query: 261 SRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I C E+ G ++ E G P++ +++A+ N ++ K+
Sbjct: 189 LTLNLILHAFCKAARPEEALGMTDIMVE---MGFCPTIVTFNALLELFCNTDQMDSAAKL 245
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+ M P+ V Y + + G + EA +E+ +V G + P + V N + GLC
Sbjct: 246 LETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCG-YAPNLLVCNAYVAGLC 304
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G +A +L M+++ GC AN TY LV+G C+ GR EA RVLEEM+ P
Sbjct: 305 KTGEMDLASRFLTVMAEE-GCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDS 363
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMIS--QAKLPDISVWSSLVASVC 484
TY+VLI+GLCS G+ A M + ++ ++ PD + + L+ +C
Sbjct: 364 TTYSVLIQGLCSAGQIEHAFMVMLQVTRAVESARPDPATFVKLIEKLC 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 178/408 (43%), Gaps = 20/408 (4%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGI-------LSESNRITEMKEVIDQMKGDSCECKDSVF 83
F EAK ++ G S++ + SE+ + E K + +M C+ +
Sbjct: 30 FDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHLHRM---DCKPNSVSY 86
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSC 142
T I +G++ EA + +++ ++N + + K L EA ++ +
Sbjct: 87 NTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMES 146
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G+ + + + N +++ LC+ R D A V + M + P+ + ++++ C R
Sbjct: 147 AGFALTA--VTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARP 204
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA M + + G IV + LL C+ ++ A ++LE + K P
Sbjct: 205 EEA----LGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCK-PNFV 259
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I + + + A++ + + ++ G P+L +A L G + + L M
Sbjct: 260 TYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVM 319
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G + Y + + K G +DEA V+EE + +G+ +P Y++L++GLC AG
Sbjct: 320 AEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGS-LPDSTTYSVLIQGLCSAGQ 378
Query: 383 SAVAVMYLKKMSKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEM 429
A M + ++++ V + T+ L++ LC G A+ VLE M
Sbjct: 379 IEHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 210/483 (43%), Gaps = 46/483 (9%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L+ ++ ++++Q+ P + F + ++R + + +I +L++ + ++
Sbjct: 61 FLSSEIVNDVMREQRRPELGFRFFIWTTRRR-SFR-SWVTHNLVIDMLAKDDGFDTYWKI 118
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
++++K + + F+ I YA++G +AV F + F C ++N++L MV+
Sbjct: 119 LEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQ 178
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ A ++ + +L++ LC+ ++D AL +F EM +G P+
Sbjct: 179 KEVFLLALAVY-NQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y I++ GLC +R ++ LL +M ++S G D + LL C G+I +A +
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTM--KVS--GCCPDSITCNALLDGFCKLGQIDEAFAL 293
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L+ ++G + + YS++ L+
Sbjct: 294 LQLFEKEGY------------------------------------VLGIKGYSSLIDGLF 317
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
R E + +M G P +V+Y + + GMVD AL ++ + +G P
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG-LSPDT 376
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN L+KG CD G A ++SK C TY IL+ G+CR+G EA ++
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKN-DCFPTSCTYTILICGMCRNGLLDEARQIFN 435
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M P + T+N LI GLC G+ EA +M K P + + S A +T
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDT 494
Query: 488 ADL 490
A L
Sbjct: 495 ASL 497
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 189/465 (40%), Gaps = 53/465 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I L + R E++E +M E ++ IR + G ++ A+++ +++
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQ 163
Q T +N L+K L+ A L L C+ + +L+ +C+
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC-----TYTILICGMCR 423
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY--------SMFWR 215
D A +F +M+ GC P +++ L+ GLC L EA HL Y S+F R
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLR 483
Query: 216 ISQKGSG-EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+SQ D +T++ LC+ G I A ++L ++ G+ P + + +
Sbjct: 484 LSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV-VPDIMTYNVLINGFCKA 542
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
++I GA L E ++G P +Y + + R + +VLD+M G PS +Y
Sbjct: 543 KNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVY 602
Query: 335 E---------AKLAALFK---------DGMVDEALEVIEEEMVKGTFVPTVRV------- 369
+ KL+ F DE L++ EE KG VR
Sbjct: 603 KCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFK 662
Query: 370 --------YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
Y I L GLC A S A+ + K+ N + +L++GLC+DG
Sbjct: 663 LNNFEIAPYTIWLIGLCQARRSEEALKIFLVL-KECQMDVNPPSCVMLINGLCKDGNLEM 721
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
A + L + + N L+R L K A+ L M S
Sbjct: 722 AVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNS 766
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 197/443 (44%), Gaps = 37/443 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F E +K N +Y ++ L ++ R ++ +++ MK C C DS+ A
Sbjct: 220 ALKMFDEMTQK--GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC-CPDSITCNA 276
Query: 87 I-RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + + GQ++EA +L + + V + +++L+ + + + + + R +
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ-EWCRKMFKA 335
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
++ + +L+ C+ D AL++ +M +G PD Y+ L+KG C+ L++A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
S+ IS+ Y L+ +C G + +A QI ++ G +
Sbjct: 396 R----SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG-DKVLDEMRT 324
+ C GE +E A+ L + I G PSL R+ +G D+V+D
Sbjct: 452 LIDGLCKAGE-LEEARHLFYKMEI-GKNPSLFL------------RLSQGADRVMDT--- 494
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ + L + G++ +A +++ + G VP + YN+L+ G C A N
Sbjct: 495 -------ASLQTMVERLCESGLILKAYKLLMQLADSGV-VPDIMTYNVLINGFCKAKNIN 546
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A +++ + G + TYG L+DG R R +A RVL++M+ P Y L
Sbjct: 547 GAFKLFRELQLK-GHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL 605
Query: 445 IRGLCSIGKQYEAV-MWLEEMIS 466
+ C GK A +WL+ + S
Sbjct: 606 MTWSCRKGKLSVAFSLWLKYLRS 628
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 133/333 (39%), Gaps = 43/333 (12%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ F +M GC PD +Y+ ++ + E L +++ ++ + + +
Sbjct: 150 AVESFGKMKDFGCKPDVFTYNSILHVMVQ----KEVFLLALAVYNQMLKLNYNPNRATFV 205
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
LL LC GK DA+++ +++ +KG+
Sbjct: 206 ILLNGLCKNGKTDDALKMFDEMTQKGIP-------------------------------- 233
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
P+ Y+ + L R + ++L+ M+ G P + A L K G +DE
Sbjct: 234 ----PNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++ +G +V ++ Y+ L+ GL A + +KM K G + Y IL
Sbjct: 290 AFALLQLFEKEG-YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFK-AGIEPDVVLYTIL 347
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G C G A +L +M R P YN LI+G C +G +A E+
Sbjct: 348 IRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDC 407
Query: 470 LPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
P ++ L+ +C N L+ R+ Q+ +
Sbjct: 408 FPTSCTYTILICGMCRNGL-LDEARQIFNQMEN 439
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 214/503 (42%), Gaps = 69/503 (13%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYAS---MIGILSESNRITEM 64
L+P ++ II+ +P + F A + +R + S + +L N +
Sbjct: 56 FLSPKIVTSIIQNPPNPQLGFRFFIWA-SNFKRFR----AWESCDLITDLLINQNGLELY 110
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ ++ +K + + F I+ Y + G ++A+ F ++ F+C
Sbjct: 111 CQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCT------------ 158
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + N+++DVL Q LAL V+ M C P
Sbjct: 159 ------------------------PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLP 194
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ ++ IL+ GLC + +A HL F ++Q+G D Y ++ LC ++ DA
Sbjct: 195 NVATFSILIDGLCKSGNVKDALHL----FDEMTQRGILPDAFTYCVVISGLCRSKRVDDA 250
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSLA 297
++ +K+ G+ D CN +G + ++ A SL+ G + +
Sbjct: 251 YRLFDKMKDSGVGP--------DFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVR 302
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
YS + L+ R + + +M P + +Y + L + G V +ALE++ E
Sbjct: 303 GYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELL-NE 361
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M + VP YN+L+KG CD G + A ++S+ C N +TY IL+ G+CR+G
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRH-DCFPNVKTYSILISGMCRNG 420
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+A + EM +P T+N LI GLC G+ +A + +M + P + +
Sbjct: 421 LTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRL 479
Query: 478 SLVASVCCNTADLNVCRKTLEQL 500
S S ++A L +K +EQL
Sbjct: 480 SQGPSHVLDSASL---QKMVEQL 499
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R++Q G ++ Y LL LCD+ + Q+A+++L+ + G P
Sbjct: 146 MDIV---LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------ 196
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + SY+ + + EG + + EM +
Sbjct: 197 ----------------------------PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + +AAL K +D+A+EV+ MVK +P R YN ++ G C +G
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVL-TSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM G + TY L+D LC++GR EA ++ + M R P + TY L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ P+ V+S L+ +
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 9/394 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L+ LC RS AL + Q M G C PD SY ++ G + L++A Y
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA----Y 219
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ + +G ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 280 CSSGQPKE-AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 339 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G + TYG ++ LC+ GR +A R E+M+ P YN LI LC
Sbjct: 398 SKMRQQ-GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A + EM+ + D ++S++ S C
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 194/432 (44%), Gaps = 10/432 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V + T I + + G L++A +
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + ++++++ + K ++ A + L S V ++ N ++ C
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKA-MEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A+ ++M G PD +Y+ LM LC + R EA MF ++++G +I
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR----KMFDSMTKRGLKPEI 339
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TLL +G + + +L+ ++R G+ P I +C ++ A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIH-PNHYVFSILICAYAKQGKVDQAMLVFS 398
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ +G P +Y + L GR+ + + ++M + P ++Y + + +L
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D+A E+I E + +G + T+ +N ++ C G + L + ++G + T
Sbjct: 459 KWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDIIT 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+DG C G+ EA+++L M+ P TYN LI G C I + +A++ EM
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 466 SQAKLPDISVWS 477
S PDI ++
Sbjct: 577 SSGVSPDIITYN 588
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 184/422 (43%), Gaps = 49/422 (11%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----------------------- 138
+ + ++Q C+ S+N LLK + E++ + A L
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 139 ------LRSCYG--WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L YG E+ R + + + ++ LC+ + D A+ V M G P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ ++ G C+ + EA L M G D+V Y +L+ LC G+ +A
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKM----HSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
++ + + ++GLK + + G +E L + ++R GI P+ +S +
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMVRNGIHPNHYVFSILIC 382
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+G++ + V +MR +G P V Y + L K G V++A+ E+M+
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF-EQMIDERLS 441
Query: 365 PTVRVYNILLKGLC--DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P VYN L+ LC D + A ++ L+ + + G + + ++D C++GR +E+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELI-LEMLDR--GICLDTIFFNSIIDSHCKEGRVIES 498
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + M+ P + TY+ LI G C GK EA L M+S PD +++L+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 483 VC 484
C
Sbjct: 559 YC 560
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 205/475 (43%), Gaps = 55/475 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S+I L ++ + + EV+ M + + + + Y +GQ EA+
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCYG-----WEVK 148
K + ++N+L+ + K + A +F + YG + K
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 149 SRIQSLNLLMDVLCQ--------------CR-----RSDLALHVFQEMDFQGCYPDRESY 189
+ ++ L+D++ + C + D A+ VF +M QG PD +Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A M G+ ++Y +L+ +LC K A +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGN----IVYNSLIHSLCIFDKWDKAKELIL 468
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN 308
++L +G+ + I C +G IE K + + ++R G+ P + +YS + ID Y
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK--LFDLMVRIGVKPDIITYSTL-IDGYC 525
Query: 309 -EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ E K+L M + G P V Y + K +++AL V+ EM P +
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL-VLFREMESSGVSPDI 584
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG-----ETYGILVDGLCRDGRFLEA 422
YNI+L+GL +A A K++ VG +G TY I++ GLC++ EA
Sbjct: 585 ITYNIILQGLFQTRRTAAA----KEL--YVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R+ + + + T+N++I L +G+ EA + + +PD+ +S
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+L +Y + GR+ G L + KGF + + L L D +A+++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDG 412
+ M + +P V YNILLKGLCD S A+ L+ M G C + +Y +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G +A EML R P V TY+ +I LC +A+ L M+ +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 473 ISVWSSLVASVC 484
++S+V C
Sbjct: 269 CRTYNSIVHGYC 280
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 192/496 (38%), Gaps = 52/496 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K A K+F ++ + Y +++ + + EM
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKGALVEMH 359
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++D M + VF+ I YA+ G++++A+ +F + Q T ++ T++ +
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNL----LMDVLCQCRRSDLALHVFQEMDFQG 181
K ++E A F + + R+ N+ L+ LC + D A + EM +G
Sbjct: 420 CKSGRVEDAMRYFEQM-----IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D ++ ++ C + R+ E+ L + + RI K DI+ Y TL+ C GK+
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVRIGVK---PDIITYSTLIDGYCLAGKM 530
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++L ++ G+K P + + +E A L E G P + +Y+
Sbjct: 531 DEATKLLASMVSVGMK-PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE----- 356
+ L+ R ++ + G L Y L L K+ + DEAL + +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 357 -EMVKGTF----------------------------VPTVRVYNILLKGLCDAGNSAVAV 387
++ TF VP VR Y+++ + L + G
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M + GC AN +V L + G A L M+ ++ + L
Sbjct: 710 DLFLSMEEN-GCTANSRMLNSIVRKLLQRGDITRAGTYL-FMIDEKHFSLEASTASLFLD 767
Query: 448 LCSIGKQYEAVMWLEE 463
L S GK E +L E
Sbjct: 768 LLSGGKYQEYHRFLPE 783
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 198/470 (42%), Gaps = 57/470 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T L K K+ AL ++KE + N ++I L ++ R+TE +E+ +M
Sbjct: 415 TLLDGFFKAGKTE-QALNLWKETLAR--GLARNVVTINTVINGLCKNRRMTEAEELFHRM 471
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
K SC C + T I Y + G L A + + V + FN+ +
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITG------- 524
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
LF+ G R+ EM +G P+ +Y
Sbjct: 525 -----LFIAKQSGKVNDIRV------------------------EMSAKGLSPNTVTYGA 555
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ G C + L++A L + M +KG ++ I L+ +GK+ +A +L+K+
Sbjct: 556 LIAGWCKEGNLHDACILYFEMV----EKGLKPNLFICSVLVSCFYREGKVDEANLVLQKL 611
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA-SYSAMAIDLYNEG 310
+ + C+ G + I E+L G S ++ + + L G
Sbjct: 612 ADTDM-----------IQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
R+ + + ++++ KGF P Y + + G +D A + +EM+ P + Y
Sbjct: 661 RVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFG-LRDEMLSARLTPNIVTY 719
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N L+ GLC + N + AV K+ + G N TY L+DG C+DG EA ++ ++M+
Sbjct: 720 NSLIYGLCKSCNVSRAVSLFNKLQSK-GISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TY +LI GLC+ G EA+ L++MI P+ + +L+
Sbjct: 779 KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 198/450 (44%), Gaps = 31/450 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +MI + R+ E+++++ + + + T + Y R G + +A +
Sbjct: 307 VYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ T ++NTLL ++ A L+ V + I S + L+D + +
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEI-SCSTLLDGFFKAGK 425
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ AL++++E +G + + + ++ GLC +RR+ EA L F R+ + D +
Sbjct: 426 TEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEEL----FHRMKEWSCPCDSL 481
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
YRTL+ C G + A QI ++ G P + + + E
Sbjct: 482 TYRTLIDGYCKLGDLGRATQIRIEMENLGF-VPSVEMFNSFITGLFIAKQSGKVNDIRVE 540
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P+ +Y A+ EG + + + EM KG P+L + ++ +++G
Sbjct: 541 MSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGK 600
Query: 347 VDEALEVIEE----EMVKGTFVPTVRVYNI--LLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
VDEA V+++ +M++ T+ + + +++ L + + +M
Sbjct: 601 VDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIM------------ 648
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ I++ GLC+ GR +A + E++ ++ + P TY+ LI G + G A
Sbjct: 649 -----WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGL 703
Query: 461 LEEMISQAKLPDISVWSSLVASVC--CNTA 488
+EM+S P+I ++SL+ +C CN +
Sbjct: 704 RDEMLSARLTPNIVTYNSLIYGLCKSCNVS 733
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 34/422 (8%)
Query: 79 KDSVFATA-----IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
KD F+ A +R +A AGQL +A+ +F + + +S N LL ++V+ +
Sbjct: 88 KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147
Query: 134 AHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A +F + C G ++ ++ C+ R A +EM+ G + +YH +
Sbjct: 148 AVAVFQQMRCAGTLPDDF--TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
M G C + A LL+S+ KG ++V Y L+ C +G++++A +++++I
Sbjct: 206 MDGYCRIGQTEVARKLLHSL----QVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI- 260
Query: 253 RKGLKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ + ID C G +E A + +E + G ++ Y+ M
Sbjct: 261 ------KENEKIVIDEVAYGALINGYCQRGR-MEDANRVRDEMIDAGVQVNMFVYNTMIN 313
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
GR+ E +K+L +G Y + + G + +A E + MV+ F
Sbjct: 314 GYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDM-MVRNGFT 372
Query: 365 PTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
T YN LL G C G + A+ + +L M K+ G V N + L+DG + G+ +A
Sbjct: 373 GTTLTYNTLLNGFCSRGAIDDALKLWFL--MLKR-GVVPNEISCSTLLDGFFKAGKTEQA 429
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ +E L R V T N +I GLC + EA M + D + +L+
Sbjct: 430 LNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG 489
Query: 483 VC 484
C
Sbjct: 490 YC 491
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 206/477 (43%), Gaps = 51/477 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L + + E V+ + + V+ T I Y + G L +A+ + ++
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLMDVL 161
+ + N++++ K ++E A C E+ SR S+N ++ L
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAE------CILEEMLSRGFSINPGAFTTIIHWL 431
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C R + AL +EM + P+ L+ GLC + + ++A L ++R+ +KG
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL----WFRLLEKGF 487
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
G ++V L+ LC G +Q+A+++L+K+L +G K + + C +G+ EG K
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547
Query: 282 ----------------------------------SLINEALIRGGIPSLASYSAMAIDLY 307
+L NE R +P++ +Y M
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+I EG+K+ E+ T+ + V+Y + A ++G EA ++ ++ KG PT
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG-IPPTT 666
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ G+C+ G A + +M K+ G + N Y L+ G C+ G+ + VL+
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKE-GLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM P TY V+I G G A L EM+ + +PD ++ L C
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 43/373 (11%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V +++ L+ L + + + VF+ M QG PD + + C ++ +A
Sbjct: 208 VFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAI 266
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L + M + G ++V Y L+ LC G + +A + EK+++ G+ A + +
Sbjct: 267 QLFFDM----EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA-TLITYSV 321
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ E A S++ E L +G P+ Y+ + G + + ++ +M +KG
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV---------------------- 364
P+ V + + K G +++A ++EE + +G +
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 365 ------------PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVD 411
P + L+ GLC G + AV ++ + + K G AN T L+
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG--ANLVTTNALIH 499
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GLC+ G EA R+L++ML R + TYN LI G C GK E EM+ Q P
Sbjct: 500 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 559
Query: 472 DISVWSSLVASVC 484
D ++ L+ +C
Sbjct: 560 DTFTYNLLIHGMC 572
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
V + KG +P++ L++L K ++++ V E M +G P V +++ +
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET-MRQGV-SPDVYLFSTAINAF 256
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A+ M K +G N TY L+ GLC+ G EA R E+M+
Sbjct: 257 CKGGKVEDAIQLFFDMEK-LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TY+VLI GL + K EA L+E + + P+ V+++L+ C
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYC 362
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 219/473 (46%), Gaps = 24/473 (5%)
Query: 6 PRLLTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI--- 61
P ++ P +++ + SP AL++F+ A E P +R + V+ +++ IL+++N +
Sbjct: 382 PVIVDPDLFVRVLSSFRTSPRMALRLFRWA-ESQPGFRRSEFVFCAILEILAQNNLMRSA 440
Query: 62 ---------TEMKEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M ++D + G S E + I Y++ + + +S+F + +
Sbjct: 441 YWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSR 500
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++ N +L+ ++++ L + + R+ + +K I + N L+D C+ +
Sbjct: 501 LSPDVKNCNRILR-ILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 559
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L + EM +GC P+ +Y++L+ GL +A L+ M + G Y
Sbjct: 560 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML----KTGLKVSAYTYNP 615
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L++ ++G + +A+ + E+++ KG + + C G + A +++ L
Sbjct: 616 LIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR-MSDAMQQLSDMLAN 674
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
+P + SY+ + G +++ + DE+R+ +P++V Y L L + G ++ A
Sbjct: 675 NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVA 734
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ ++ EM+ P + Y IL+ G C G+ ++A + +M + G + Y +
Sbjct: 735 -QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE-GLELDSYAYATRI 792
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
G + G A + EEML + + P + YNV++ GLC +G EA L++
Sbjct: 793 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 9/327 (2%)
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
C EV +I L+LL+ V + + L VF +M PD ++ + +++ L +
Sbjct: 463 CVSSEVSVKI--LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDL 520
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+++A + +M + G IV Y TLL + C GK+Q + +L ++ R+G AP
Sbjct: 521 MSKAVEVYRTM----GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC-APND 575
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + + + E AK LI E L G S +Y+ + +N+G + E + +E
Sbjct: 576 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEE 635
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M KG P++ Y + + L K G + +A++ + + M+ +P V YN L+ G C G
Sbjct: 636 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSD-MLANNLLPDVVSYNTLIYGYCRLG 694
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
N A + ++ + + TY L+DGLCR G A ++ EM+ P + TY
Sbjct: 695 NLMKAFLLFDEL-RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 753
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQA 468
+L+ G C +G A + +EM+ +
Sbjct: 754 TILVNGSCKMGSLSMAQEFFDEMLHEG 780
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+V M G P++V Y L + K G V + L+++ E +G P YN+L+ G
Sbjct: 526 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC-APNDVTYNVLING 584
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L G A + +M K G + TY L+ G G EA + EEM+++ P
Sbjct: 585 LSKKGEFEQAKGLIGEMLK-TGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASP 643
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TYN I GLC +G+ +A+ L +M++ LPD+ +++L+ C
Sbjct: 644 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 691
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + G++ +G +L EM+ +G P+ V Y + L K G ++A +
Sbjct: 538 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 597
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
I E M+K + YN L+ G + G A A+ ++M + G TY + GL
Sbjct: 598 IGE-MLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLK-GASPTVATYNSFIYGL 655
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ GR +A + L +ML + P V +YN LI G C +G +A + +E+ S P I
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715
Query: 474 SVWSSLVASVC 484
+++L+ +C
Sbjct: 716 VTYNTLLDGLC 726
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 194/427 (45%), Gaps = 14/427 (3%)
Query: 45 GP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
GP Y +M+ + ++ + ++ +M E + T IR G+ A++
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + CV ++ LL+ K S + A L L I + N++++ +
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL-LDEMRDKGCTPDIVTYNVVVNGI 238
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ R D A+ + + GC P+ SY+I++KGLC R +A L+ M QKG
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM----GQKGC 294
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V + L+ LC +G ++ A+++LE+I + G P S + L + ++ A
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC-TPNSLSYNPLLHAFCKQKKMDKAM 353
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ ++ + RG P + SY+ + L G + ++L +++ KG P L+ Y + L
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G EALE++ E + KG P + Y+ + GLC A+ K+ + +G
Sbjct: 414 TKAGKTKEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKV-QDMGIRP 471
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N Y ++ GLC+ A + M+ P TY +LI GL G EA L
Sbjct: 472 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 531
Query: 462 EEMISQA 468
+E+ S+
Sbjct: 532 DELCSRG 538
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 194/424 (45%), Gaps = 37/424 (8%)
Query: 87 IRTYARAGQLNEAV---------------SLFKNLSQFN-----------CVNWTQSFNT 120
+R+ R G+L+EA+ +L K LS C ++N
Sbjct: 72 LRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNA 131
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
++ +L+AA L V+ + N L+ LC R+ AL V EM +
Sbjct: 132 MVAGYCGAGQLDAARRLVAE----MPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 187
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD +Y IL++ C +A LL M KG DIV Y ++ +C +G+
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKGCTPDIVTYNVVVNGICQEGR 243
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ DA++ L+ + G + P + + I L E E A+ L+ E +G P++ +++
Sbjct: 244 VDDAIEFLKNLPSYGCE-PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L +G + +VL+++ G P+ + Y L A K +D+A+ ++ + +
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G + P + YN LL LC +G VAV L ++ K GC +Y ++DGL + G+
Sbjct: 363 GCY-PDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTK 420
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA +L EM+ + P + TY+ + GLC + +A+ ++ P+ ++++++
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 480
Query: 481 ASVC 484
+C
Sbjct: 481 LGLC 484
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 7/226 (3%)
Query: 33 EAKEKYPNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
E E+ P Y N Y ++ + ++ + +D M C + T +
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R+G+++ AV L L C S+NT++ + K K + A + L ++
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA-LELLNEMVSKGLQPD 437
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + + + LC+ R + A+ F ++ G P+ Y+ ++ GLC R TH
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE----THSAI 493
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+F + G + Y L+ L +G I++A +L+++ +G+
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 196/444 (44%), Gaps = 9/444 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY+++I E +++ +M + + IR + G++ A + K +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ + T ++N +++ +++ E A L L + + + +++++ LCQ
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEA-FLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S+ A + ++M G P+ Y L+ G C + + A L M +++ D+
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM----TRENLTPDLY 524
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ L + GK+ +A++ +++L KG + P + + + ++E A+ L+++
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQ-PNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P+ Y+ + + + + L M KG P +Y + L G
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGH 643
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A+ V+ + K VP +Y L+ G C A + AV L +M+K+ G Y
Sbjct: 644 MQAAVSVLSV-IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK-GIEPGISCY 701
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DG C+ A + ++ + P TY LI G C G +A+ EM++
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761
Query: 467 QAKLPDISVWSSLVASVCCNTADL 490
+ PD V+S L A C N+ DL
Sbjct: 762 EGVAPDAFVYSVLAAG-CSNSGDL 784
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 138/308 (44%), Gaps = 42/308 (13%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ G PD +Y L++ C R L A ++ M + G ++V Y TL+ LC
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEM----RETGCSLNVVTYNTLIGGLC 289
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G I++A +++ GL +P
Sbjct: 290 RAGAIEEAFGYKKEMEDYGL------------------------------------VPDG 313
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y A+ L GR + +LDEM G P++V+Y + + G DEA ++++E
Sbjct: 314 FTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
G P Y+ L++GLC G A LK+M+K +G +A+ TY ++++G R
Sbjct: 374 MSAAGV-QPNKITYDNLIRGLCKLGRMGRASRILKQMTK-IGYMADTMTYNLVIEGHLRQ 431
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
EA +L EM P V TY+++I GLC IG+ A LE+MI+ P+ V+
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491
Query: 477 SSLVASVC 484
+ L++ C
Sbjct: 492 APLISGYC 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 160/385 (41%), Gaps = 50/385 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL- 106
Y S+I LS ++ E E D+M + D + I Y+ AG L +A L +
Sbjct: 526 YNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML 585
Query: 107 -SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
S N ++ + +L+ K LE +V S ++S
Sbjct: 586 NSGLNPNDFI--YAQILEGYFKSDNLE-------------KVSSTLKS------------ 618
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
M +G PD Y I++ L + + A S+ I + G D
Sbjct: 619 -----------MLEKGLMPDNRLYGIVIHNLSSSGHMQAAV----SVLSVIEKNGLVPDS 663
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+IY +L+ C ++ A+ +L+++ +KG++ S + + C +DI A+++ N
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKS-DDISHARNIFN 722
Query: 286 EALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ +G P+ +Y+ + ID Y G I + + +EM T+G P +Y A
Sbjct: 723 SIICKGLPPNCVTYTTL-IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNS 781
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + +AL + EE + +G + + +N L+ G C G V +L M + V +
Sbjct: 782 GDLQQALFITEEMIARGYAI--ISSFNTLVHGFCKRGKLQETVKFLHVMMDK-DIVPSLL 838
Query: 405 TYGILVDGLCRDGRFLEASRVLEEM 429
T +V GL G+ EA + E+
Sbjct: 839 TVENIVIGLGEAGKLSEAHTIFVEL 863
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 217/475 (45%), Gaps = 45/475 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L +S + + + V++QM + + I Y+ +G NE+V +FK +
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRS---------------CYG--- 144
S + + N+ + + K + A +F L+ CY
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401
Query: 145 --WEVKSRIQSL-------------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
W + I +L N+L++ +C D A+ +F++M +G PD ++
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 461
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC RL++A H F + G +Y L+ C+ G++ A +++
Sbjct: 462 ATVISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 517
Query: 250 KILRKGLKAPKSRRHR-IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ K + P + I C +G EG K +++ + G P++ +++++
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEG-KDIMDMMVQTGQRPNVVTFNSLMEGYCL 576
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G + E +LD M + G P+ +Y + K+G +D+AL V + + KG PT
Sbjct: 577 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSV 635
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+Y+I+L GL A + A +M + G + TYG+++ GLCR+ EA+ +LE+
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 694
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + + T+N++I + +G++ EA + + + +P+I +S ++ ++
Sbjct: 695 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 749
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 174/405 (42%), Gaps = 45/405 (11%)
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+L+ VK+ +++ AH LFL V +I N ++ LC+ + D A + Q+M
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLE-MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 273
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD +Y +++ GLC + +++A +L M + G+ + + Y +L+ G
Sbjct: 274 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV----EAGTRPNSITYNSLIHGYSISG 329
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++++ +++ G+ + G E AK + + +++G P + SY
Sbjct: 330 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE-AKCIFDSMVLKGPKPDIISY 388
Query: 300 SAMA-------------------------------------IDLYNE-GRIVEGDKVLDE 321
S A I+ Y G + + + ++
Sbjct: 389 STNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 448
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ KG P V + +++L + G +D+AL MV P+ VY L++G C+ G
Sbjct: 449 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKF-NHMVDIGVPPSEAVYGCLIQGCCNHG 507
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + +M + + + +++ LC++GR E +++ M+ P V T+
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 567
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 568 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 612
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 162/352 (46%), Gaps = 10/352 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+D + R DL L + + G PD SY L+ G D +++A +
Sbjct: 176 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA----H 230
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F + ++G I+I +++ LC ++ A I++K++ G+ AP + + +
Sbjct: 231 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI-APDLFTYSLIIDG 289
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ ++ A+ ++ + + G P+ +Y+++ G E +V +M + G P+
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ + + ALFK G +EA + + ++KG P + Y+ +C + V VM+
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTNASWVCYWYVTVVWVMWH 408
Query: 391 KKMSKQV--GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + G N + IL++ R G +A + E+M + P T+ +I L
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
C IG+ +A+ M+ P +V+ L+ CCN +L ++ + ++
Sbjct: 469 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG-CCNHGELVKAKELISEM 519
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 6/334 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+ +I + + + + + M+ FAT I + R G+L++A+ F
Sbjct: 422 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 481
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ + L++ +L A L ++ + +++ LC+
Sbjct: 482 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 541
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R + M G P+ +++ LM+G C + EA LL +M + G
Sbjct: 542 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM----ASIGIEP 597
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ IY TL+ C G+I DA+ + +L KG+K P S + I L AK +
Sbjct: 598 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK-PTSVLYSIILHGLFQARRTTAAKKM 656
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+E + G S+ +Y + L E + +L+++ ++ + ++A+FK
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 716
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
G EA E+ + G VP ++ Y++++ L
Sbjct: 717 VGRRQEAKELFDAISTYG-LVPNIQTYSMMITNL 749
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGED--IEGAKSLINEALIRGGIPSLASYSAMAID 305
L IL +AP S C D IE K + A R P++ +Y+ + ID
Sbjct: 133 LNGILAALARAPPS-------AACGDAPALAIELFKRMDRWACPRHSPPTIHTYNIL-ID 184
Query: 306 LYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
Y R G ++ + G P Y + + KDG VD+A + E M +G +
Sbjct: 185 CYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGV-L 242
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + + N ++K LC A ++KM G + TY +++DGLC+ +A R
Sbjct: 243 PKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLIIDGLCKSKAMDKAER 301
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
VLE+M+ P TYN LI G G E+V ++M S +P + +S + ++
Sbjct: 302 VLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
VY +I + + KE+I +M D F++ I + G++ E +
Sbjct: 495 VYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 554
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ Q +FN+L++ +E A L L + ++ L+D C+
Sbjct: 555 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL-LDAMASIGIEPNCYIYGTLVDGYCKNG 613
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D AL VF++M +G P Y I++ GL RR A MF + + G+ I
Sbjct: 614 RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK----KMFHEMIESGTTVSI 669
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC +A +LEK+ +K + + G E AK L +
Sbjct: 670 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE-AKELFD 728
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P++ +YS M +L E E D + + G
Sbjct: 729 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 769
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT+ YNIL+ + + + ++ K G + +Y L+ G +DG +A
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKN-GLGPDDFSYS-LIYGFVKDGEVDKAHC 231
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EM+ + P + N +I+ LC + + +A +++M+ PD+ +S ++ +C
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291
Query: 485 CNTADLNVCRKTLEQL 500
+ A ++ + LEQ+
Sbjct: 292 KSKA-MDKAERVLEQM 306
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 171/376 (45%), Gaps = 14/376 (3%)
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ V++T N KE + H + R + + + N ++ LC+ + D
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRG-----ILPDVVTYNSIIAALCKAQAMDK 249
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ V M G PD +Y+ ++ G C+ + EA L M G D+V Y
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM----RSDGVEPDVVTYS 305
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ LC G+ +A +I + + ++GLK + + G +E L + ++
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMV 363
Query: 290 RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R GI P +S + +G++ + V +MR +G P+ V Y A + L K G V+
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A+ + E+M+ P VYN L+ GLC A + +M + C+ N +
Sbjct: 424 DAM-LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNS 481
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++D C++GR +E+ ++ E M+ P V TYN LI G C GK EA+ L M+S
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 469 KLPDISVWSSLVASVC 484
P+ +S+L+ C
Sbjct: 542 LKPNTVTYSTLINGYC 557
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 38/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R+++ G ++ Y LL LCD+ + Q+A+++L +
Sbjct: 142 MDIV---LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM-------------- 184
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+D G G P + SY+ + + EG + EM +
Sbjct: 185 --------ADDRGG-----------GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + +AAL K +D+A+EV+ MVK +P YN +L G C +G
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM + G + TY +L+D LC++GR +EA ++ + M R P + TY L+
Sbjct: 285 AIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ PD V+S L+ +
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 174/396 (43%), Gaps = 10/396 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 152 QSLNLLMDVLCQCRRSDLA---LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
S N+L+ LC RS A LH+ + G PD SY ++ G + ++A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA--- 215
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
YS + + +G D+V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 216 -YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C+ G+ E A + + G P + +YS + L GR +E K+ D M +G
Sbjct: 275 GYCSSGQPKE-AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 334 PEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
KM +Q G N TYG ++ LC+ GR +A E+M+ P YN LI GL
Sbjct: 393 VFSKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C+ K A + EM+ + + ++S++ S C
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 178/405 (43%), Gaps = 8/405 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ + I +A +++A+ + + + + ++N++L + + A I FL+
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA-IGFLKK 291
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V+ + + +LLMD LC+ R A +F M +G P+ +Y L++G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L E LL M + G D ++ L+ A QGK+ AM + K+ ++GL
Sbjct: 352 LVEMHGLLDLMV----RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G +E A + + G P Y+++ L + ++++ E
Sbjct: 408 TYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G + + + + + + K+G V E+ E + E MV+ P V YN L+ G C AG
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ L M VG N TY L++G C+ R +A + +EM P + TY
Sbjct: 526 KMDEAMKLLSGMV-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N++++GL + A + ++S ++ ++ +C N
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 195/431 (45%), Gaps = 18/431 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ S + E + +M+ D E ++ + + G+ EA +F ++
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL----C 162
++ ++ TLL+ + L H L V++ I + + +L
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLL-----DLMVRNGIHPDHYVFSILICAYA 382
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A+ VF +M QG P+ +Y ++ LC R+ +A +LY F ++ +G
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLY--FEQMIDEGLS 438
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++Y +L+ LC K + A +++ ++L +G+ + I C +G IE K
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK- 497
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E ++R G+ P++ +Y+ + G++ E K+L M + G P+ V Y +
Sbjct: 498 -LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K +++AL V+ +EM P + YNI+L+GL +A A ++++ G
Sbjct: 557 CKISRMEDAL-VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES-GTQI 614
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY I++ GLC++ +A ++ + + + T+N++I L +G+ EA
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 462 EEMISQAKLPD 472
S +P+
Sbjct: 675 VAFSSNGLVPN 685
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 34/404 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L ++ R E +++ D M + + + + T ++ YA G L E L +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------LLMD 159
+ F+ L+ K+ K++ A ++F K R Q LN ++
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVF--------SKMRQQGLNPNAVTYGAVIG 414
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+LC+ R + A+ F++M +G P Y+ L+ GLC + A L+ M R
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---- 470
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + + + +++ + C +G++ ++ ++ E ++R G+K + + C G+ ++
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK-MDE 529
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L++ + G P+ +YS + R+ + + EM + G P ++ Y L
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
LF+ A E+ GT + + YNI+L GLC + A+ + + C
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIE-LSTYNIILHGLCKNKLTDDALQMFQNL-----C 643
Query: 400 VAN----GETYGILVDGLCRDGRFLEASRVL----EEMLIRSYW 435
+ + T+ I++D L + GR EA + L+ +YW
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG----IPSLA 297
+DA + +++LR+G A +R + D A + R G P L
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNR---ALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + GR+ G L + KGF + + L L D +A++++
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVDGLCR 415
M + +P V YNILLKGLCD S A+ L M+ G + + +Y +++G +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G +A EML R P V TYN +I LC +A+ L M+ +PD
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 476 WSSLVASVC 484
++S++ C
Sbjct: 269 YNSILHGYC 277
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 46/376 (12%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS---- 75
KQ A+ +F + +++ N N Y ++IGIL +S R+ + +QM +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 76 -----------CEC--------------------KDSVFATAIRTYARAGQLNEAVSLFK 104
C C F + I ++ + G++ E+ LF+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++NTL+ K++ A L L +K + + L++ C+
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL-LSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R + AL +F+EM+ G PD +Y+I+++GL RR A L + RI++ G+ +
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL----YVRITESGTQIE 615
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ Y +L LC DA+Q+ + + LK + + G + E AK L
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE-AKDLF 674
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
G +P+ +Y MA ++ +G + E D++ M G M + L +
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 345 GMVDEA---LEVIEEE 357
G + A L +I+E+
Sbjct: 735 GEITRAGTYLSMIDEK 750
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 206/477 (43%), Gaps = 51/477 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L + + E V+ + + V+ T I Y + G L +A+ + ++
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLMDVL 161
+ + N++++ K ++E A C E+ SR S+N ++ L
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAE------CILEEMLSRGFSINPGAFTTIIHWL 498
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C R + AL +EM + P+ L+ GLC + + ++A L ++R+ +KG
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL----WFRLLEKGF 554
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
G ++V L+ LC G +Q+A+++L+K+L +G K + + C +G+ EG K
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 614
Query: 282 ----------------------------------SLINEALIRGGIPSLASYSAMAIDLY 307
+L NE R +P++ +Y M
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+I EG+K+ E+ T+ + V+Y + A ++G EA ++ ++ KG PT
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG-IPPTT 733
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ G+C+ G A + +M K+ G + N Y L+ G C+ G+ + VL+
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRKE-GLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM P TY V+I G G A L EM+ + +PD ++ L C
Sbjct: 793 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 43/373 (11%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V +++ L+ L + + + VF+ M QG PD + + C ++ +A
Sbjct: 275 VFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAI 333
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L + M + G ++V Y L+ LC G + +A + EK+++ G+ A + +
Sbjct: 334 QLFFDM----EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA-TLITYSV 388
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ E A S++ E L +G P+ Y+ + G + + ++ +M +KG
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV---------------------- 364
P+ V + + K G +++A ++EE + +G +
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508
Query: 365 ------------PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVD 411
P + L+ GLC G + AV ++ + + K G AN T L+
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG--ANLVTTNALIH 566
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GLC+ G EA R+L++ML R + TYN LI G C GK E EM+ Q P
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 626
Query: 472 DISVWSSLVASVC 484
D ++ L+ +C
Sbjct: 627 DTFTYNLLIHGMC 639
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
V + KG +P++ L++L K ++++ V E M +G P V +++ +
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET-MRQGV-SPDVYLFSTAINAF 323
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A+ M K +G N TY L+ GLC+ G EA R E+M+
Sbjct: 324 CKGGKVEDAIQLFFDMEK-LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TY+VLI GL + K EA L+E + + P+ V+++L+ C
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYC 429
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 200/429 (46%), Gaps = 12/429 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPL--TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
R LTP++L+ + + +P +AL+IF + + Y +I L S R +
Sbjct: 68 RGLTPSHLAAVAAVRLAPCAGSALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDA 127
Query: 65 KEVIDQMKGDSCECKDSVFATAIR-TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++ DQM S ++ F + + + AG L+ A +L S+ C ++N LL
Sbjct: 128 LKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLN 187
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
++ + + A LF + S N+++ +C+ AL + + M GC
Sbjct: 188 SLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCS 247
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG-SGEDIVIYRTLLFALCDQGKIQ 242
PD +++IL+ GLC +++N+ + + R+ + G + V Y +++ C GK++
Sbjct: 248 PDTITHNILVDGLCRAKQVNKG----HEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKME 303
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
DAM + +L G + P + + + + D+E A + + ++R P + ++S++
Sbjct: 304 DAMSVYNDMLESGTR-PNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSL 362
Query: 303 AIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
ID Y G++ + ++ EM P++ + + +L K EAL+++ E ++
Sbjct: 363 -IDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRT 421
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P +YN ++ LC G A + + M K+ GC + TY IL+ G C GR E
Sbjct: 422 DIAPQTFIYNPVIDILCKGGKVDEANLIVTDM-KEKGCHPDKYTYTILIIGHCMKGRIPE 480
Query: 422 ASRVLEEML 430
A + +M+
Sbjct: 481 AITLFHKMV 489
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 155/371 (41%), Gaps = 44/371 (11%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
QS ++ LC+ R AL +F +M Q Y + + G C + L +A L +
Sbjct: 109 QSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLT 168
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
+ S+ G + Y LL +L G+ QDA+ + E ++ GL +P + +
Sbjct: 169 ---KGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGV 225
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF-WPS 330
+ + A L+ G P +++ + L ++ +G +VL ++ G P+
Sbjct: 226 CRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPN 285
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MY 389
V Y + ++ K G +++A+ V + + GT P YN+L+ G A + AV MY
Sbjct: 286 AVTYTSVISGYCKAGKMEDAMSVYNDMLESGT-RPNTVTYNVLINGYGKALDMESAVRMY 344
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ + + C + T+ L+DG CR G+ +A R+ +EM + P V T++++I LC
Sbjct: 345 RQLILRH--CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLC 402
Query: 450 SI------------------------------------GKQYEAVMWLEEMISQAKLPDI 473
GK EA + + +M + PD
Sbjct: 403 KQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDK 462
Query: 474 SVWSSLVASVC 484
++ L+ C
Sbjct: 463 YTYTILIIGHC 473
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 166/371 (44%), Gaps = 57/371 (15%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+L CR DL A +F MD +GC P+ +Y L+ GLCN R+NEA + M +
Sbjct: 270 ILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM----T 325
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G + + + ALCD G+I+DA +I + +KG K P + + G+ +
Sbjct: 326 RHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCK-PNVYTYTSLI----SGQRV 380
Query: 278 EG-AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A L + G +P+ +Y+A+ L I V + M G P+ Y
Sbjct: 381 SRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNE 440
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ G ++A+ ++ M+KG PT+ YNI++KG CD+G++ VA+ L+ M K
Sbjct: 441 LIRGYCTIGDTEKAMSMLTN-MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM-KA 498
Query: 397 VGC-----------------------------------VANGETYGILVDGLCRDGRFLE 421
GC N TY L+ G C+D +
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCS----IGKQYEAVMWLEEMISQAKLPDISVWS 477
A+R+LE M P V+TYNVLI GL G + + LEE IS PD+ +S
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS----PDVVTYS 614
Query: 478 SLVASVCCNTA 488
+++ +C N A
Sbjct: 615 TVINGLCNNGA 625
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 209/482 (43%), Gaps = 11/482 (2%)
Query: 2 SVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
S R P++ TY + +I+ K +T+ + + + + N +Y S+I L + +
Sbjct: 185 SQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNV 244
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+ + +I+++ + + + I Y R L+ A +F + + C +++TL
Sbjct: 245 RDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTL 304
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ + ++ A + F+ V + + + LC R + A +F +M +G
Sbjct: 305 INGLCNSGRVNEA-LDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKG 363
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ +Y L+ G + + +F R+S+ G + V Y L+ L + +I
Sbjct: 364 CKPNVYTYTSLISG-------QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A+ + + + G S + + C G D E A S++ L P+L +Y+
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIG-DTEKAMSMLTNMLKGRPTPTLVTYNI 475
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + G +VL+ M+ G P Y ++ K ++ A + E M +G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y L+ G C A L++M K+ GC N +TY +L+ GL + F
Sbjct: 536 -LCPNEVTYTALISGYCKDEKLDCAARMLERM-KRSGCRPNVQTYNVLIHGLTKQNNFSG 593
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A + + ML P V TY+ +I GLC+ G A+ +M+ LP++ +SSL+
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653
Query: 482 SV 483
++
Sbjct: 654 AL 655
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 204/494 (41%), Gaps = 65/494 (13%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ +L E+ I V + M C S + IR Y G +A+S+
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLC 162
N+ + ++N ++K + A +L L G + S L+ C
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE--WSYTELISGFC 516
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + +LA +F EM +G P+ +Y L+ G C D +L+ A M R+ + G
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR----MLERMKRSGCR 572
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ L Q A ++ + +L + + + CN+G I A
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA-IPLALE 631
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ N+ + G +P+L +YS++ L EGR+ E +++ E++ +G P V Y +
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA---------GNSAVAVMYLKKM 393
G VD A + + E M+ PT++ Y++L+KGL + N+A + ++
Sbjct: 692 MSGKVDRAFDFLGE-MINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQI 750
Query: 394 -SKQVGCVANG-----------ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+K V V + + Y L+ L R GR+ EA+ + M+ +S P +TY
Sbjct: 751 INKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTY 810
Query: 442 NV-----------------------------------LIRGLCSIGKQYEAVMWLEEMIS 466
LI LC + ++ EA E+M+S
Sbjct: 811 KHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLS 870
Query: 467 QAKLPDISVWSSLV 480
+A D VW+ L+
Sbjct: 871 RALNADEIVWTILI 884
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 168/397 (42%), Gaps = 26/397 (6%)
Query: 78 CKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
C + V TA I Y + +L+ A + + + + C Q++N L+ + K++ A
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L + ++ + + + +++ LC LAL +F +M GC P+ +Y L++ L
Sbjct: 597 L-CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ R+ EA MF + ++G D V Y ++ GK+ A L +++ G
Sbjct: 656 GQEGRVEEAEE----MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGC 711
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG--GIPSLASYSAMAIDLYNEGRIVE 314
+ P + + + + K L NE + +P+ AS S + N+ I
Sbjct: 712 Q-PTLQTYDVLI------------KGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISV 758
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
L E+ F S +Y+A L+ L + G EA + MV + P Y L
Sbjct: 759 LSSKLAEL---DFELSRQLYDALLSRLSRSGRWFEA-NNLYRSMVSQSQCPNQDTYKHFL 814
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
L A +A+ K MS Q C + Y L+ LC+ R EA V E+ML R+
Sbjct: 815 ISLLRALKVDLAMDVFKHMSDQ-RCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRAL 873
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ +LI GL G + + +L M + + P
Sbjct: 874 NADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNP 910
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 193/405 (47%), Gaps = 19/405 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS- 141
+ I Y ++G++ EA+ + + S +++ +L + KL+ A + R
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 142 ---CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
CY + + +L+D C+ A+ +F EM +GC PD +Y++L+KG C
Sbjct: 199 QSKCY-----PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ RL+EA L ++ G D++ + +L +LC G+ DAM++L +LRKG
Sbjct: 254 EGRLDEAIIFL----KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFP 309
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + C G + A +++ G P+ S++ + N I +
Sbjct: 310 SVVTFNILINFLCQKGL-LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+ M ++G +P +V Y L AL KDG VD+A+ ++ + KG P++ YN ++ GL
Sbjct: 369 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC-SPSLISYNTVIDGLL 427
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G + +AV L++M + G + T +V GL R+G+ EA + + P
Sbjct: 428 KVGKAELAVELLEEMCYK-GLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNA 486
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
YN ++ GLC + A+ +L +M++ P + +++L+ +
Sbjct: 487 FIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGI 531
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 53/378 (14%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ + ++ ++M+G C+ + I+ + + G+L+EA+ K L + C + S N
Sbjct: 222 VGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNM 281
Query: 121 LLKEMVKESK-LEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+L+ + + ++A +L + C+ + + N+L++ LCQ AL+V +
Sbjct: 282 ILRSLCSGGRWMDAMKLLATMLRKGCF-----PSVVTFNILINFLCQKGLLGKALNVLEM 336
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G P+ S++ L++G CN + ++ A L M R G DIV Y LL ALC
Sbjct: 337 MPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR----GCYPDIVTYNILLTALC 392
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK+ DA+ IL ++ KG PSL
Sbjct: 393 KDGKVDDAVVILSQLSSKGCS------------------------------------PSL 416
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY+ + L G+ ++L+EM KG P L+ + + L ++G V EA++
Sbjct: 417 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFF-- 474
Query: 357 EMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+KG + P +YN ++ GLC A +++A+ +L M GC +Y L+ G+
Sbjct: 475 HYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVAN-GCKPTEASYTTLIKGITY 533
Query: 416 DGRFLEASRVLEEMLIRS 433
+G EAS++ E+ R
Sbjct: 534 EGLAEEASKLSNELYSRG 551
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 179/405 (44%), Gaps = 47/405 (11%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D V TA IR + + G+ A + L + V S+N L+ K ++E A
Sbjct: 103 DVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA---- 158
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
LR V + + ++ LC + A+ V CYPD + +L+ C
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ + +A L F + KG D+V Y L+ C +G++ +A+ L+K+ G ++
Sbjct: 219 ESGVGQAMKL----FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ S++ + L + GR ++ K+
Sbjct: 275 ------------------------------------DVISHNMILRSLCSGGRWMDAMKL 298
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L M KG +PS+V + + L + G++ +AL V+E M K P R +N L++G C
Sbjct: 299 LATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEM-MPKHGHTPNSRSFNPLIQGFC 357
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A+ +L+ M + GC + TY IL+ LC+DG+ +A +L ++ + P +
Sbjct: 358 NRKGIDRAIEHLEIMVSR-GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 416
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+YN +I GL +GK AV LEEM + PD+ +S+V +
Sbjct: 417 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL 461
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 10/311 (3%)
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+ M +G PD + L++ C R AT ++ + + G+ D Y L+
Sbjct: 92 LEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIM----GILEESGAVIDANSYNVLIN 147
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
A C G+I++A+++L+ AP + + LC D ++ A +++ L
Sbjct: 148 AYCKSGEIEEALRVLDHTSV----APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCY 203
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + + + + E + + K+ +EMR KG P +V Y + K+G +DEA+
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+++ G + +N++L+ LC G A+ L M ++ GC + T+ IL++ L
Sbjct: 264 LKKLPSYGCQSDVIS-HNMILRSLCSGGRWMDAMKLLATMLRK-GCFPSVVTFNILINFL 321
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G +A VLE M + P ++N LI+G C+ A+ LE M+S+ PDI
Sbjct: 322 CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDI 381
Query: 474 SVWSSLVASVC 484
++ L+ ++C
Sbjct: 382 VTYNILLTALC 392
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+GE EG++ + +G IP + + +A+ + GR +++ + G
Sbjct: 82 NGELEEGSR-FLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + A K G ++EAL V++ V P Y+ +L LCD G A+ L +
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHTSV----APNAATYDAVLCSLCDRGKLKQAMQVLDR 196
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
Q C + T +L+D C++ +A ++ EM + P V TYNVLI+G C G
Sbjct: 197 -QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA+++L+++ S D+ + ++ S+C
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 91/247 (36%), Gaps = 40/247 (16%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRH--NGPVYASMIGILSESNRIT 62
+P ++T L + ++ AL + E P + H N + +I I
Sbjct: 308 FPSVVTFNILINFLCQKGLLGKALNVL----EMMPKHGHTPNSRSFNPLIQGFCNRKGID 363
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E ++ M C + + + G++++AV + LS C S+NT++
Sbjct: 364 RAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423
Query: 123 KEMVKESKLEAAHILFLRSCY----------------------------------GWEVK 148
++K K E A L CY G+ +K
Sbjct: 424 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIK 483
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
N +M LC+ +++ LA+ +M GC P SY L+KG+ + EA+ L
Sbjct: 484 PNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543
Query: 209 LYSMFWR 215
++ R
Sbjct: 544 SNELYSR 550
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 8/385 (2%)
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T IR G+ A+++ + + CV ++ LL+ K S + A L L
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL-LDEMRD 223
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
I + N++++ +CQ R D A+ + + GC P+ SY+I++KGLC R +
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L+ M QKG ++V + L+ LC +G ++ A+++LE+I + G +P S +
Sbjct: 284 AEELMGEM----GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC-SPNSLSY 338
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
L + ++ A + ++ + RG P + SY+ + L G + ++L +++
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P L+ Y + L K G EALE++ E + KG P + Y+ + GLC
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIE 457
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ K+ + +G N Y ++ GLC+ A + M+ P TY +L
Sbjct: 458 DAIRAFGKV-QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAK 469
I GL G EA L+E+ S+ +
Sbjct: 517 IEGLAYEGLIKEARDLLDELCSRGE 541
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 37/424 (8%)
Query: 87 IRTYARAGQLNEAV---------------SLFKNLSQFN-----------CVNWTQSFNT 120
+R+ R G+L+EA+ +L K LS C ++N
Sbjct: 74 LRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNA 133
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
++ +++AA R C V+ + + L+ LC R+ AL V EM +
Sbjct: 134 MMAGYCGAGQVDAAR----RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR 189
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD +Y IL++ C +A LL M KG DIV Y ++ +C +G+
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKGCTPDIVTYNVVVNGICQEGR 245
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ DA++ L+ + G + P + + I L E E A+ L+ E +G P++ +++
Sbjct: 246 VDDAIEFLKNLPSYGCE-PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L +G + +VL+++ G P+ + Y L A K +D+A+ ++ + +
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G + P + YN LL LC +G VAV L ++ K GC +Y ++DGL + G+
Sbjct: 365 GCY-PDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTK 422
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA +L EM+ + P + TY+ + GLC + +A+ ++ P+ ++++++
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482
Query: 481 ASVC 484
+C
Sbjct: 483 LGLC 486
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 51/372 (13%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D+M+ C + + + G++++A+ KNL + C T S+N +LK +
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275
Query: 126 VKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ E A L + C + + N+L+ LC+ + AL V +++ G
Sbjct: 276 CTAERWEDAEELMGEMGQKGC-----PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ SY+ L+ C +++++A L M R G DIV Y TLL ALC G++
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR----GCYPDIVSYNTLLTALCRSGEV 386
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A+++L ++ KG P L SY+
Sbjct: 387 DVAVELLHQLKDKGCA------------------------------------PVLISYNT 410
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L G+ E ++L+EM +KG P ++ Y A L ++ +++A+ + G
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P +YN ++ GLC + A+ M GC+ N TY IL++GL +G E
Sbjct: 471 -IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKE 528
Query: 422 ASRVLEEMLIRS 433
A +L+E+ R
Sbjct: 529 ARDLLDELCSRG 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 41/280 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L + EV++Q+ C + + + + ++++A++ +
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C S+NTLL LC+
Sbjct: 362 VSRGCYPDIVSYNTLLT------------------------------------ALCRSGE 385
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D+A+ + ++ +GC P SY+ ++ GL + EA LL M KG DI+
Sbjct: 386 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV----SKGLQPDII 441
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T+ LC + +I+DA++ K+ G++ + I L C E A L
Sbjct: 442 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE-THSAIDLFAY 500
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ G +P+ ++Y+ + L EG I E +LDE+ ++G
Sbjct: 501 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 7/225 (3%)
Query: 33 EAKEKYPNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
E E+ P Y N Y ++ + ++ + +D M C + T +
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R+G+++ AV L L C S+NT++ + K K + A + L ++
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA-LELLNEMVSKGLQPD 439
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + + + LC+ R + A+ F ++ G P+ Y+ ++ GLC R TH
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE----THSAI 495
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+F + G + Y L+ L +G I++A +L+++ +G
Sbjct: 496 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 7/338 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + N+LM + + + A +VF EM +G P +++ LM G+C LN A
Sbjct: 110 VPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNAN 169
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M ++ G D+ Y + LC G+IQDAM++ E++ +GL +
Sbjct: 170 ALRGLM----AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 225
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G D+ L E RG L +Y+A+ + + +++EMR G
Sbjct: 226 IDAHCKEG-DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 284
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K+G +D A+E+ +E +G + V Y L+ GL AG S A
Sbjct: 285 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV-TYTALISGLSKAGRSVDA 343
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +M + G + TY +++D C++G + L+EM + P + TYNV++
Sbjct: 344 ERILCEM-MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 402
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G CS+G+ A M L M++ P+ ++ L+ C
Sbjct: 403 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 440
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 12/338 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL-FLRS 141
F +R R+G+L A ++F + + +FNTL+ M K S L A+ L L +
Sbjct: 117 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 176
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + + + LC+ R A+ +F+EM +G P+ L+ C +
Sbjct: 177 KAG--IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK- 260
+ L W ++ +G D+V Y L+ C ++ A I+E++ + GLK K
Sbjct: 235 VTAGLELR----WEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 290
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ ID C C +GE ++ A + E G +Y+A+ L GR V+ +++L
Sbjct: 291 TYTTLIDGC-CKEGE-LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 348
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM G P Y + A K+G V + ++E KG P + YN+++ G C
Sbjct: 349 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKN-PGIVTYNVVMNGFCSL 407
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
G A M L M +G N TY IL+DG C+ G+
Sbjct: 408 GQMKNADMLLNAM-LNIGVCPNDITYNILLDGHCKHGK 444
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 180/403 (44%), Gaps = 39/403 (9%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVK 148
R + EA + + +L + FN L+++M++ KL +A +F LR V+
Sbjct: 91 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRR----GVQ 146
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + N LM +C+ + A + M G PD +Y ++GLC R+ +A
Sbjct: 147 PTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME- 205
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
MF + ++G + V+ TL+ A C +G + +++ ++ +G+KA DL
Sbjct: 206 ---MFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKA--------DL 254
Query: 269 CPCN---DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
N +G D++ A ++ E G P +Y+ + EG + ++ E
Sbjct: 255 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 314
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G V Y A ++ L K G +A E I EM++ P Y +++ C G
Sbjct: 315 MSDEGVALDDVTYTALISGLSKAGRSVDA-ERILCEMMEAGLQPDNTTYTMVIDAFCKNG 373
Query: 382 NSAVAVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ +LK+M K G V TY ++++G C G+ A +L ML P
Sbjct: 374 DVKTGFKHLKEMQNKGKNPGIV----TYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPND 429
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMIS-QAKLPDISVWSSLV 480
TYN+L+ G C GK V EE+ S + + D V++SL+
Sbjct: 430 ITYNILLDGHCKHGK----VRDTEELKSAKGMVSDFGVYTSLI 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 8/295 (2%)
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--D 267
Y+ + + G + + L+ + GK+ A + +++LR+G++ + +
Sbjct: 99 YAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG 158
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+C +D + + L+ +A G P + +Y A L GRI + ++ +EM +G
Sbjct: 159 MCKASDLNNANALRGLMAKA---GIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGL 215
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ V+ + A K+G V LE+ E +G V YN L+ G C + A
Sbjct: 216 NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV-AYNALVNGFCRVRDMKAAN 274
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+++M K G + TY L+DG C++G A + +EM TY LI G
Sbjct: 275 DIVEEMRKD-GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 333
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
L G+ +A L EM+ PD + ++ ++ + C N D+ K L+++ +
Sbjct: 334 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKN-GDVKTGFKHLKEMQN 387
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 7/265 (2%)
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
D+G + D +L LR+G++ P + N + A + L G P
Sbjct: 59 DEGLLPDGCSLLLLALRRGIRVPMPAWSDL----MNRLPSVPEAYAFYLHLLDAGVPPEA 114
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++ + D+ G++ V DEM +G P++V + ++ + K ++ A +
Sbjct: 115 RQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA-NALRG 173
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M K P V Y ++GLC G A+ ++M ++ G N L+D C++
Sbjct: 174 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER-GLNPNTVVLTTLIDAHCKE 232
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G + EM R + YN L+ G C + A +EEM PD +
Sbjct: 233 GDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTY 292
Query: 477 SSLVASVCCNTADLNVCRKTLEQLS 501
++L+ CC +L+ + +++S
Sbjct: 293 TTLIDG-CCKEGELDTAMEMKQEMS 316
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 161/324 (49%), Gaps = 7/324 (2%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A+ VF+ M + C D +Y LM GLCN+ R++EA LL M +G
Sbjct: 10 LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM----QVEG 65
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ + V + L+ ALC +G + A ++++ + KG + + + C G+ ++ A
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGK-LDKA 124
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
SL+N + +P+ ++ + GR ++G +VL + KG+ + Y + ++
Sbjct: 125 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 184
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
LFK+G + +++ +E + KG P VY+ L+ GLC G A YL +M K G
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGC-KPNTIVYSALIDGLCREGKPDEAKEYLIEM-KNKGHT 242
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY L+ G G +A V +EM Y++LI GLC GK EA++
Sbjct: 243 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 302
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
++M+S+ D+ +SS++ C
Sbjct: 303 WKQMLSRGIKLDVVAYSSMIHGFC 326
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 59/402 (14%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
R G +++AV +F+ +S NCV +++TL
Sbjct: 12 RVGNVDQAVEVFRGMSDRNCVADGYTYSTL------------------------------ 41
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
M LC R D A+ + EM +G +P+ ++++L+ LC L+ A+ L+ +
Sbjct: 42 ------MHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDN 95
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
MF KG + V Y +L+ LC +GK+ AM +L +++ A K + I
Sbjct: 96 MFL----KGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV-----ANKCVPNDITFGTL 146
Query: 272 ND-----GEDIEGAKSLIN--EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
D G ++G + L++ E RG + SYS++ L+ EG+ G ++ EM
Sbjct: 147 VDGFVKHGRALDGVRVLVSLEEKGYRG---NEFSYSSLISGLFKEGKGEHGMQLWKEMVE 203
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P+ ++Y A + L ++G DEA E + E KG P Y+ L+ G +AG+
Sbjct: 204 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG-HTPNSFTYSSLMWGYFEAGDIH 262
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A++ K+M+ C + Y IL++GLC++G+ EA V ++ML R V Y+ +
Sbjct: 263 KAILVWKEMTDN-DCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 321
Query: 445 IRGLCSIGKQYEAVMWLEEMI-SQAKL-PDISVWSSLVASVC 484
I G C+ + + +M+ KL PD+ ++ L+ + C
Sbjct: 322 IHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 363
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 193/465 (41%), Gaps = 36/465 (7%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++F+ ++ N +G Y++++ L RI E ++D+M+ + F
Sbjct: 19 AVEVFRGMSDR--NCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 76
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + G L+ A L N+ CV ++N+L+ + + KL+ A L R
Sbjct: 77 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 136
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + I + L+D + R+ + V ++ +G + SY L+ GL + +
Sbjct: 137 VPNDI-TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGM 195
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M +KG + ++Y L+ LC +GK +A + L ++ KG P S +
Sbjct: 196 QLWKEMV----EKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG-HTPNSFTYSS 250
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + DI A + E YS + L G++ E V +M ++G
Sbjct: 251 LMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRG 310
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAV 385
+V Y + + +V++ +++ + + P V YNILL C + +
Sbjct: 311 IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSR 370
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGL------CRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ L M Q GC + T I + L +DGR L+E+++R
Sbjct: 371 AIDILNTMLDQ-GCDPDFITCDIFLKTLRDNMDPPQDGR-----EFLDELVVR------- 417
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI+ ++G A +E M+ + LP S W+ V +C
Sbjct: 418 ----LIKRQRTVG----ASNIIEVMLQKFLLPKPSTWALAVQQLC 454
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC GN AV + MS + CVA+G TY L+ GLC +GR EA +L+EM + +
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDR-NCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTF 67
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P +NVLI LC G A ++ M + +P+ ++SLV +C
Sbjct: 68 PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 116
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 211/479 (44%), Gaps = 45/479 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
PRL+ + L ++ + K L + K+ + K HN + MI +++
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELK--GIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ E F+T I G+++EA+ L + + + N L+ +
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K+ A +L R + + + ++ V+C+ ++ LA+ + ++M+ + D
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y I++ GLC D L+ A +++F + KG DI+IY TL+ C G+ D
Sbjct: 247 AVKYSIIIDGLCKDGSLDNA----FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L ++++ + P + ++SA+
Sbjct: 303 KLLRDMIKRKIT------------------------------------PDVVAFSALIDC 326
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
EG++ E +++ EM +G P V Y + + K+ +D+A +++ + KG P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG-P 385
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+R +NIL+ G C A + +KMS + G VA+ TY L+ G C G+ A +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM+ R P + +Y +L+ GLC G+ +A+ E++ DI +++ ++ +C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 59/433 (13%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV LF+ +++ F+ L + + + + L L C E+K + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD----LVLDLCKQMELKGIAHNLYT 109
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ LA ++ G PD ++ L+ GLC + R++EA L+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV---- 165
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G ++ L+ LC GK+ DA+ ++++++ G
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R+ ++D C DG ++ A +L NE I+G +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS-LDNAFNLFNEMEIKGFKADIII 284
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + GR +G K+L +M + P +V + A + K+G + EA E + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA-EELHKEM 343
Query: 359 VKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ P Y L+ G C D N + +M K GC N T+ IL++G
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK------GCGPNIRTFNILINGY 397
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ + + +M +R TYN LI+G C +GK A +EM+S+ PDI
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 474 SVWSSLVASVCCN 486
+ L+ +C N
Sbjct: 458 VSYKILLDGLCDN 470
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 211/518 (40%), Gaps = 69/518 (13%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + +++ K A+++ ++ +E+ + + Y+ +I L + +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++M+ + ++ T IR + AG+ ++ L +++ + +F+ L+
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 126 VKESKL------------------------------------EAAHILFLRSCYGWEVKS 149
VKE KL +A H+L L G
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC--GP 385
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
I++ N+L++ C+ D L +F++M +G D +Y+ L++G C +L A L
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R + DIV Y+ LL LCD G+ + A++I EKI + ++ + I
Sbjct: 446 QEMVSRRVR----PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
CN ++ A L ++G P + +Y+ M L +G + E D + +M G P
Sbjct: 502 MCN-ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEE---------------------EMVKGTFVPTVR 368
+ Y + A +G ++ ++IEE M+K P V
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620
Query: 369 VYNILLKGLCDAGNSAV--AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ LL+ C N++V A K M K +G N TY ++ GL + VL
Sbjct: 621 TFTTLLRPFCLEENASVYDAPTLFKNM-KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVL 679
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
++M R P T + I GLC A++ L +M
Sbjct: 680 DQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y +L + D D+A+++ +E M + P + ++ L + + + K
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQE-MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G N T I+++ CR + A + +++ Y P T++ LI GLC
Sbjct: 97 QMELK-GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ EA+ ++ M+ P + ++LV +C N
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 211/479 (44%), Gaps = 45/479 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
PRL+ + L ++ + K L + K+ + K HN + MI +++
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELK--GIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ E F+T I G+++EA+ L + + + N L+ +
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K+ A +L R + + + ++ V+C+ ++ LA+ + ++M+ + D
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y I++ GLC D L+ A +++F + KG DI+IY TL+ C G+ D
Sbjct: 247 AVKYSIIIDGLCKDGSLDNA----FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L ++++ + P + ++SA+
Sbjct: 303 KLLRDMIKRKIT------------------------------------PDVVAFSALIDC 326
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
EG++ E +++ EM +G P V Y + + K+ +D+A +++ + KG P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG-P 385
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+R +NIL+ G C A + +KMS + G VA+ TY L+ G C G+ A +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM+ R P + +Y +L+ GLC G+ +A+ E++ DI +++ ++ +C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 59/433 (13%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV LF+ +++ F+ L + + + + L L C E+K + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD----LVLDLCKQMELKGIAHNLYT 109
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ LA ++ G PD ++ L+ GLC + R++EA L+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV---- 165
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G ++ L+ LC GK+ DA+ ++++++ G
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R+ ++D C DG ++ A +L NE I+G +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS-LDNAFNLFNEMEIKGFKADIII 284
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + GR +G K+L +M + P +V + A + K+G + EA E + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA-EELHKEM 343
Query: 359 VKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ P Y L+ G C D N + +M K GC N T+ IL++G
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK------GCGPNIRTFNILINGY 397
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ + + +M +R TYN LI+G C +GK A +EM+S+ PDI
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 474 SVWSSLVASVCCN 486
+ L+ +C N
Sbjct: 458 VSYKILLDGLCDN 470
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 191/423 (45%), Gaps = 29/423 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + +++ K A+++ ++ +E+ + + Y+ +I L + +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++M+ + ++ T IR + AG+ ++ L +++ + +F+ L+
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE KL A L + + + L+D C+ + D A H+ M +GC P+
Sbjct: 328 VKEGKLREAEELH-KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+++IL+ G C +++ L F ++S +G D V Y TL+ C+ GK++ A
Sbjct: 387 IRTFNILINGYCKANLIDDGLEL----FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIP-SL 296
++ ++++ SRR R D+ C++GE + + I E + + + +
Sbjct: 443 ELFQEMV--------SRRVRPDIVSYKILLDGLCDNGEPEKALE--IFEKIEKSKMELDI 492
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + + N ++ + + + KG P + Y + L K G + EA +++
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFR 551
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+M + P YNIL++ G++ + ++++ K+ G + T ++VD L D
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI-KRCGFSVDASTVKMVVDML-SD 609
Query: 417 GRF 419
GR
Sbjct: 610 GRL 612
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y +L + D D+A+++ +E M + P + ++ L + + + K
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQE-MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G N T I+++ CR + A + +++ Y P T++ LI GLC
Sbjct: 97 QMELK-GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ EA+ ++ M+ P + ++LV +C N
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 187/406 (46%), Gaps = 10/406 (2%)
Query: 82 VFATAIRTYARAGQLNEAVS-LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFL 139
+F+ ++ A +++EA L + + +F C S++ LLK E + E A +L +
Sbjct: 130 IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSM 189
Query: 140 RSCYG-WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ G + + ++D LC+ + D A VFQ M +G P+ +Y L+ G +
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ E +L M S G D IY LL LC G+ +A I + ++RKG+K
Sbjct: 250 IGKWKEVVQMLQEM----STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIK- 304
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + I L + S ++ + G P ++ M + I E +
Sbjct: 305 PNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHI 364
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D+MR + P++V Y A + AL K G VD+A+ + +M+ P + V++ L+ GLC
Sbjct: 365 FDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV-LKFNQMIDEGMTPDIFVFSSLVYGLC 423
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A ++ Q G + + L+ LCR+GR +EA R+++ ML P V
Sbjct: 424 TVDKWEKAEELFFEVLDQ-GIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDV 482
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+YN L+ G C G+ EA L+ ++S PD +++L+ C
Sbjct: 483 ISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 189/457 (41%), Gaps = 66/457 (14%)
Query: 54 ILSESNRITEMKEVI-DQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+ + ++R E++ VI D+ S D++ + T+AR + L +S+ C
Sbjct: 7 VTAAADRCLELERVIADRAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARC 66
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILF----LRSCY-------------------GWEVK 148
+ ++ +L M++E ++ A F L C+ GW V
Sbjct: 67 SSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVN 126
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + L+ LC +R D A + + M GC PD SY IL+KG CN++R EA
Sbjct: 127 DTV-IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALE 185
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL SM ++V Y T++ LC + A + + ++ KG++
Sbjct: 186 LL-SMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVR---------- 234
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
P+ +Y+ + + G+ E ++L EM T G
Sbjct: 235 --------------------------PNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGL 268
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +Y L L K+G EA + + + KG P V +Y ILL G G+ +
Sbjct: 269 QPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG-IKPNVTIYGILLHGYATEGSLSEMH 327
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+L M G + + I+ + EA + ++M + P + TY LI
Sbjct: 328 SFLDLMVGN-GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC +G+ +AV+ +MI + PDI V+SSLV +C
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 189/433 (43%), Gaps = 49/433 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+YA ++ L ++ R TE + + D + + +++ + YA G L+E S F +L
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS-FLDL 332
Query: 107 SQFNCVNWTQS-FNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
N V+ FN + K++ + EA HI + I + L+D LC+
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIF--DKMRQQRLSPNIVTYGALIDALCKL 390
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R D A+ F +M +G PD + L+ GLC + +A L F+ + +G D
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEEL----FFEVLDQGIRLD 446
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V + TL+ LC +G++ +A ++++ +LR G++
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR--------------------------- 479
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
P + SY+ + GRI E K+LD + + G P V Y L K
Sbjct: 480 ---------PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANG 403
+D+A + E ++KG P V YN +L GL G S +YL ++ + N
Sbjct: 531 RRIDDAYSLFREMLMKG-LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ--MNI 587
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY I+++GLC++ EA ++ + + + T N++I L G++ +A+
Sbjct: 588 YTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFAT 647
Query: 464 MISQAKLPDISVW 476
+ + +PD+ +
Sbjct: 648 ISAYGLVPDVETY 660
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 184/444 (41%), Gaps = 16/444 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ + K V M + + I Y G+ E V +
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +S + LL + K + A R+ + ++ I+ + +L
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEA-----RNIFDSVIRKGIKPNVTIYGILLH 315
Query: 164 CRRSDLAL---HVFQE-MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
++ +L H F + M G PD ++I+ ++EA H+ F ++ Q+
Sbjct: 316 GYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHI----FDKMRQQ 371
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+IV Y L+ ALC G++ DA+ +++ +G+ + C + E
Sbjct: 372 RLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCT-VDKWEK 430
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A+ L E L +G ++ + +L EGR++E +++D M G P ++ Y +
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
G +DEA ++++ +V P YN LL G C A A ++M + G
Sbjct: 491 GHCLTGRIDEAAKLLDV-IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK-GL 548
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY ++ GL + GRF EA + M+ + TYN++I GLC EA
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
+ S+ DI + ++ ++
Sbjct: 609 MFHSLCSKDLQLDIFTANIMIGAL 632
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 188/444 (42%), Gaps = 13/444 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQM--KGDSCECKDSV-FATAIRTYARAGQLNEAVSLFK 104
Y+ ++ R E E++ M GD + V + T I +A ++ A +F+
Sbjct: 167 YSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ ++ L+ + K E +L S +G + I ++ L+D LC+
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAV--LLDYLCK 284
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A ++F + +G P+ Y IL+ G + L+E ++S + G
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE----MHSFLDLMVGNGVSP 340
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D I+ + A + I +AM I +K+ ++ L + C G ++ A
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGR-VDDAVLK 399
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
N+ + G P + +S++ L + + +++ E+ +G V + + L +
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR 459
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G V EA +I+ M++ P V YN L+ G C G A L + +G +
Sbjct: 460 EGRVMEAQRLIDL-MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV-SIGLKPDK 517
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+ G C+ R +A + EML++ P V TYN ++ GL G+ EA
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577
Query: 464 MISQAKLPDISVWSSLVASVCCNT 487
MI+ +I ++ ++ +C N
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNN 601
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW--PSLVMYEAKLAALFKDGMVDEAL 351
PS +Y+ + GR+ G + G W V++ L L VDEA
Sbjct: 90 PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTG-WRVNDTVIFSQLLKGLCDAKRVDEAT 148
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV--GCVANGETYGIL 409
+++ M + P V Y+ILLKG C+ + A+ L M+ N TY +
Sbjct: 149 DILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTV 208
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DGLC+ A V + M+ + P TY LI G SIGK E V L+EM +
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGL 268
Query: 470 LPDISVWSSLVASVCCN 486
PD +++ L+ +C N
Sbjct: 269 QPDCYIYAVLLDYLCKN 285
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 40/239 (16%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+ RI E +++D + + + T + Y +A ++++A SLF+ + +
Sbjct: 495 TGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVT 554
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+NT+L + + + A L+L S + I + N++++ LC+ D A +F +
Sbjct: 555 YNTILHGLFQTGRFSEAKELYL-SMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613
Query: 178 ---DFQ--------------------------------GCYPDRESYHILMKGLCNDRRL 202
D Q G PD E+Y ++ + L + L
Sbjct: 614 CSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 673
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
E L +F + + G+ + + L+ L +G I A L K+ K S
Sbjct: 674 EE----LDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEAS 728
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 191/435 (43%), Gaps = 42/435 (9%)
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+I Y G+ ++A +F + + + NTLL +V+ ++H + L
Sbjct: 130 SIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVR---FPSSHSIRLSKAVFT 186
Query: 146 E-----VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ VK S N+L+ C R A+ V +M GC PD +Y+ ++ GLC
Sbjct: 187 DFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKG 246
Query: 201 RLNEATHLLYSMFWR-------------------------------ISQKGSGEDIVIYR 229
RLNEA LL M + +SQ D Y
Sbjct: 247 RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYN 306
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ C QG+I +AM++ E++ L +P + + C + E LI E
Sbjct: 307 VMISGFCKQGRIAEAMRLREEMENLKL-SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P+ +Y+ M +G++ E DK + +M G P +V Y ++ K G +DE
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++E KG + V + N +L+ LC A L +++ G + +YG L
Sbjct: 426 AFRLMDEMGRKGLKMDDVTL-NTMLRALCRERKLDEAHDLLCS-ARRRGYFVDEVSYGTL 483
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G + + +A R+ +EM + P + TYN +I GLC +GK +A+ L+E++
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543
Query: 470 LPDISVWSSLVASVC 484
+PD +++++ C
Sbjct: 544 VPDEITYNTIIHGYC 558
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 202/437 (46%), Gaps = 8/437 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + R+ E ++++ MK + F + R G L EA ++ + +
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELM 293
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQ + V ++N ++ K+ ++ A + ++ + + N L++ +
Sbjct: 294 SQNSVVPDAWTYNVMISGFCKQGRIAEA-MRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S+ + +EM+ +G P+ +Y++++K +++E + M + G DIV
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM----EESGCLPDIV 408
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ C GK+ +A ++++++ RKGLK + + C + ++ A L+
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRE-RKLDEAHDLLCS 467
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A RG SY + I + + + ++ DEM+ K PS++ Y + +A L + G
Sbjct: 468 ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGK 527
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++A++ ++E + G VP YN ++ G C G A + KM ++ + T
Sbjct: 528 TNQAIDKLDELLESG-LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK-NFKPDVVTC 585
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GLC++G +A ++ + + +YN +I LC + EA LEEM
Sbjct: 586 NTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645
Query: 467 QAKLPDISVWSSLVASV 483
+ PD +++++ +
Sbjct: 646 KKLGPDCYTYNAILGGL 662
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 8/321 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y M+ + ++ E+ + + +M+ C + T I + + G+++EA
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR 428
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + + NT+L+ + +E KL+ AH L + + L++
Sbjct: 429 LMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYF 488
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ ++ AL ++ EM + P +Y+ ++ GLC + N+A L + + G
Sbjct: 489 -KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL----ESGL 543
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D + Y T++ C +G+++ A Q K++ K K P LC C +G +E A
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFK-PDVVTCNTLLCGLCKEGM-LEKA 601
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L N + +G SY+ + + L E R E +L+EM K P Y A L
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661
Query: 341 LFKDGMVDEALEVIEEEMVKG 361
L G + +A E I + KG
Sbjct: 662 LTDAGRMKDAEEFISKIAEKG 682
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 197/441 (44%), Gaps = 48/441 (10%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSC 142
+T I +A Q + VS++ + + S + L + V A +L L +
Sbjct: 46 STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM--DFQGCYPDRESYHILMKGLCNDR 200
G+ V + +LNL++ C+ + D A+ +F +M ++ PD +Y+ L+ G C +
Sbjct: 106 RGFGVN--VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAK 163
Query: 201 RLNEATHLLYSMFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
RL EA L +M +KG ++V Y L+ C G++ + + +LE++ R+GLKA
Sbjct: 164 RLAEARVLFEAM-----KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ C +G DIE + L +E L R P++ +YS + L GR E ++
Sbjct: 219 DVFVYSSLISAFCGEG-DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE----------------------- 355
L +M +G P +V Y L K+G +A++V++
Sbjct: 278 LKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCK 337
Query: 356 -----------EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANG 403
E MVK P YN LLKGLC AG A+ ++ +S++ +
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDV 397
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T L+ GLC++GR +A+R+ M+ + TYN LI G + K EA+ +
Sbjct: 398 FTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKY 457
Query: 464 MISQAKLPDISVWSSLVASVC 484
+ P+ +S ++ +C
Sbjct: 458 AVESGFSPNSMTYSVMINGLC 478
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 211/465 (45%), Gaps = 24/465 (5%)
Query: 25 LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L ++ EA +K + R N Y+ +I +S + E ++++M+ + + V++
Sbjct: 165 LAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYS 224
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
+ I + G + LF + + +++ L++ + + + A + L+
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM-LKDMTA 283
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
V+ + + +L D LC+ R+ A+ V M +G P +Y++++ GLC + R+++
Sbjct: 284 RGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDD 343
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A + + + +KG D V Y TLL LC GKI +AM + + +L +
Sbjct: 344 A----FGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV------ 393
Query: 265 RIDLCPCND--------GEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEG 315
+ D+ CN+ G + A+ I+ +++ G+ ++ +Y+ + +++E
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAAR--IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
K+ GF P+ + Y + L K M+ A + + M PTV YN L+
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK-MKDSGIRPTVIDYNALMT 510
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + A ++M + V + ++ I++DG + G A +L EM +
Sbjct: 511 SLCREDSLEQARSLFQEM-RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLV 569
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P T+++LI +G EA+ E+M+S +P + V+ SL+
Sbjct: 570 PDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 213/471 (45%), Gaps = 33/471 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY+S+I I +E+ D+M ++ ++ R G+ EA + K++
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ ++ L + K + +A +L L G E + + N++++ LC+
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGT--LTYNVVVNGLCKED 339
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI--SQK-GSG 222
R D A V + M +G PD +Y+ L+KGLC +++EA L W++ S+K
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDL-----WKLLLSEKFHVK 394
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG--- 279
D+ L+ LC +G++ DA +I ++ GL+ + + IEG
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFL----------IEGYLA 444
Query: 280 AKSLINE------ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
A+ LI A+ G P+ +YS M L + + +M+ G P+++
Sbjct: 445 ARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVID 504
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y A + +L ++ +++A + +E V V +NI++ G AG+ A L +M
Sbjct: 505 YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVS-FNIIIDGTLKAGDVKSAKELLSEM 563
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ V + T+ IL++ + G EA + E+M+ + P V ++ L++G G+
Sbjct: 564 F-MMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGE 622
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ + L +M + + D + S+++A +C + +L+V K L + S S
Sbjct: 623 TEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDV-EKILPKFSQQS 672
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 90/232 (38%), Gaps = 40/232 (17%)
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+P S SA+ N VL M +GF ++ L + G D+A+
Sbjct: 74 LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133
Query: 353 VIEEEMVKGTF---VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+ + +K + VP YN L+ G C A A A + + M K C N TY +L
Sbjct: 134 LFSQ--MKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVL 191
Query: 410 VDGLCRDGRFLEASRVLEEM-----------------------------------LIRSY 434
+D C+ G E +LEEM L R
Sbjct: 192 IDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKV 251
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P V TY+ L++GL G+ EA L++M ++ PD+ ++ L +C N
Sbjct: 252 SPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKN 303
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 227/507 (44%), Gaps = 44/507 (8%)
Query: 4 RWPRLLT-------PTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILS 56
W +L T + L + + P L FK ++++ HN + ++ +L+
Sbjct: 60 HWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAI-HNVEQFCRLLHLLA 118
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATA-----------------IRTYARAGQLNEA 99
+ +++ ++D ++ ++F + + Y + G+++ A
Sbjct: 119 NAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLA 178
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ----SLN 155
+ F + S N +L +VKE + I + S Y ++ RI + +
Sbjct: 179 LEGFDRAGDYGFRLSALSCNPMLVSLVKEGR-----IGVVESVYKEMIRRRIGVNVVTFD 233
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++++ LC+ + A V ++M G P +Y+ ++ G C ++ +A LL M +
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK 293
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ + L+ C + A ++ E++ R+GL+ + + C++G+
Sbjct: 294 RIHPNE----ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A L ++ G P++ +Y+A+ + + E ++LD++ +G P+++ +
Sbjct: 350 -LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ A K G +D+A ++ M+ P V YN L+ G C GN A K+M
Sbjct: 409 TLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI---RSYWPCVETYNVLIRGLCSIG 452
G A+ TY ILVD LC+ G +A R+L+EM + + + TYNVLI+G C+ G
Sbjct: 468 N-GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKG 526
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSL 479
K EA L EM+ + +P+ + + L
Sbjct: 527 KLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 179/425 (42%), Gaps = 60/425 (14%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L + RI ++ V +M F I + G+ +A + +++ +
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++NT++ K K+ A L L+ + + N+L+D C+ A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADAL-LKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
VF+EM QG P+ +Y+ L+ GLC++ +L+EA L M S G ++V Y
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM----SGMGLKPNVVTYNA 374
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C + +++A ++L+ I ++GL AP + ++ A L + L
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGL-APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++++Y+ + + EG + E K+ EM G LV
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV------------------ 475
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS--KQVGCVANGETYGI 408
YNIL+ LC G + AV L +M+ ++ G AN TY +
Sbjct: 476 ------------------TYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV 517
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G C G+ EA+R+L EML + P TY++L +EM+ +
Sbjct: 518 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMMEKG 561
Query: 469 KLPDI 473
+PDI
Sbjct: 562 FIPDI 566
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S S + M + L EGRI + V EM + ++V ++ + L K G +A +V+
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGL 413
E+ G F P+V YN ++ G C AG A LK+M +K++ N T+ IL+DG
Sbjct: 253 EDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH--PNEITFNILIDGF 309
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
CRD A +V EEM + P V TYN LI GLCS GK EA+ ++M P++
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Query: 474 SVWSSLVASVC 484
+++L+ C
Sbjct: 370 VTYNALINGFC 380
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 7/317 (2%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
DLAL F G S + ++ L + R+ ++ S++ + ++ G ++V
Sbjct: 176 DLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG----VVESVYKEMIRRRIGVNVVT 231
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ ++ LC GK Q A ++E + G + I C G+ + A +L+ E
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK-ADALLKEM 290
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ + P+ +++ + + + KV +EM+ +G P++V Y + + L +G +
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEAL ++++M P V YN L+ G C A L + K+ G N T+
Sbjct: 351 DEALG-LQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVITFN 408
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+D + GR +A + ML P V TYN LI G C G EA +EM
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 468 AKLPDISVWSSLVASVC 484
D+ ++ LV ++C
Sbjct: 469 GLKADLVTYNILVDALC 485
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D GF S + L +L K+G + +E + +EM++ V +++++ GLC
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIG-VVESVYKEMIRRRIGVNVVTFDVVINGLC 240
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A ++ M K G + TY ++DG C+ G+ +A +L+EM+ + P
Sbjct: 241 KVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNE 299
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
T+N+LI G C A EEM Q P++ ++SL+ +C N
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 198/472 (41%), Gaps = 17/472 (3%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
+++ P AL++F A + P H M+ ++ R+ +M +V D M+
Sbjct: 80 HMLRSAPGPAEALELFTAAARQ-PTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQI 138
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
+ FAT G L A + + ++N L+ +VK S +A
Sbjct: 139 VKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVK-SGFDAEA 197
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ ++ + +++ ++LM + R D L + EM+ +G P+ SY I ++
Sbjct: 198 MEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRV 257
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R +EA Y + ++ G D+V + ++ LCD G++ DA + K
Sbjct: 258 LGQAARFDEA----YQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWK----- 308
Query: 256 LKAPKSRRHRID----LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+KA + R+ L C D D + + N + G ++ SY+A+ L GR
Sbjct: 309 MKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGR 368
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ E V DEM+ KG P Y + ++ K M D ALE+ G P +
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGP-SPNGYTHV 427
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+ + +G S A+ + M K G V + ++ L R GR A RV E+
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHM-KSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P TY ++I+ K EA+ + +M+ +PD+ +SL+ ++
Sbjct: 487 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTL 538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 195/475 (41%), Gaps = 47/475 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S++++ E M C + I T + G+ NEA LF L
Sbjct: 495 TYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQL 554
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++NTLL + +E K++ L + + I + N ++D L +
Sbjct: 555 KEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLI-TYNTVLDCLSKNGE 613
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ + M +GC PD SY+ +M GL + R EA + MF ++ +K D
Sbjct: 614 VNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEA----FRMFCQM-KKILAPDYA 668
Query: 227 IYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRI------------------- 266
T+L + G +++A+ + E IL+ KS H +
Sbjct: 669 TLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAEN 728
Query: 267 -----------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
LCP C + +E A L N+ G SY+++ L +E
Sbjct: 729 IASRGILLNDFFLCPLIRHLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 787
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I + + EM+ G P Y L A+ K ++E L V + EM + + T Y
Sbjct: 788 LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRV-QAEMHRKGYESTYVTY 846
Query: 371 NILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
N ++ GL + A+ +Y MS+ G TYG L+DGL + G+ ++A + EM
Sbjct: 847 NTIISGLVKSKRLEQAIDLYYNLMSE--GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEM 904
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L P YN+L+ G G E+M+ Q PDI ++ L+ ++C
Sbjct: 905 LEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLC 959
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 181/429 (42%), Gaps = 38/429 (8%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMK----GDSCECKDSVFATAIRTYARAGQLNEAVS 101
P YA++ IL + MKE + +K C S F + + + +++
Sbjct: 665 PDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIE 724
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+N++ + L++ + K K AH LF G V + S N L+ L
Sbjct: 725 FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLF-NKFKGLGVSLKTGSYNSLIRGL 783
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
D+A +F EM GC PD +Y++++ + R+ E + M +KG
Sbjct: 784 VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMH----RKGY 839
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG-- 279
V Y T++ L +++ A+ + ++ +G PC G ++G
Sbjct: 840 ESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP----------TPCTYGPLLDGLL 889
Query: 280 -------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD----KVLDEMRTKGFW 328
A++L NE L G P+ Y+ L N RI ++ ++M +G
Sbjct: 890 KAGKMVDAENLFNEMLEYGCKPNCTIYNI----LLNGHRIAGNTENVCQIFEKMVEQGIN 945
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y + L G +++ L + + G P + +YN+L+ GL + AV
Sbjct: 946 PDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELG-LEPDLIIYNLLIDGLGKSERIEEAVC 1004
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+M K+ G V N TY L+ L + G+ EA+++ EE+LI+ + P V TYN LIRG
Sbjct: 1005 LFNEMKKK-GIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGY 1063
Query: 449 CSIGKQYEA 457
G A
Sbjct: 1064 SVSGSTDNA 1072
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 191/425 (44%), Gaps = 18/425 (4%)
Query: 8 LLTPTYLSQIIK---KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
LL +L +I+ K K L A ++F + K + + Y S+I L + N I
Sbjct: 735 LLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS--YNSLIRGLVDENLIDIA 792
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ +MK C + + + ++ ++ E + + + + + ++NT++
Sbjct: 793 EDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISG 852
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+VK +LE A L+ + + L+D L + + A ++F EM GC P
Sbjct: 853 LVKSKRLEQAIDLYY-NLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKP 911
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ Y+IL+ G R+ T + +F ++ ++G DI Y L+ LC G++ D
Sbjct: 912 NCTIYNILLNG----HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDG 967
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++L GL+ P + + + E IE A L NE +G +P+L +Y+++ +
Sbjct: 968 LSYFRQLLELGLE-PDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLIL 1026
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L G+ E ++ +E+ KG+ P++ Y A + G D A + V
Sbjct: 1027 HLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVG---- 1082
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
V + L+ GL D +A +M K+ GC + TY +++D + + R E +
Sbjct: 1083 --VSLKTALISGLVDENLINIAEGLFAEM-KRRGCGPDQFTYNLILDAIGKSMRIEEMLK 1139
Query: 425 VLEEM 429
V EE+
Sbjct: 1140 VQEEI 1144
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 10/381 (2%)
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
LS V S+NT+L + ++ L+AA LFL E + S LM LC
Sbjct: 69 LSSLPSVRDAVSYNTVLAALCRQGGCLDAA--LFLLRVMAHETRPTAVSYTTLMRALCAE 126
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
RR+ A+ + ++M G PD +Y L++GLC+ +++A LL M + G +
Sbjct: 127 RRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM----CESGIEPN 182
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V+Y LL C G+ + ++ E++ +G++ + C +G+ ++ A ++
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK-VKKATQVM 241
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ + RG P++ +Y+ + + EG + E + + M KG V Y + L
Sbjct: 242 DKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGV 301
Query: 345 GMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+DEA+ ++EE + T V P V +N ++ GLC G A ++ M + GC N
Sbjct: 302 LEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA-FQVRDMMAENGCACNL 360
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
T+ +L+ GL R + +A +++EM P TY++LI G C + + A L +
Sbjct: 361 VTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420
Query: 464 MISQAKLPDISVWSSLVASVC 484
M P++ + L+A++C
Sbjct: 421 MRRDGIEPELVHYIPLLAALC 441
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 199/478 (41%), Gaps = 48/478 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R Y +++ L R + ++ M+ + T IR A +++AV
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + + ++ LL+ K + E +F G ++ + L+D L
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF-EEMSGRGIEPDVVMYTGLIDSL 228
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A V +M +G P+ +Y++L+ +C + + EA L +M +KG
Sbjct: 229 CREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNML----EKGV 284
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILR----------------KGLKAPKSRRHR 265
D V Y TL+ L ++ +AM +LE+++ GL R
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA 344
Query: 266 IDL--------CPCN------------DGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ C CN ++ A L++E G P +YS +
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
++ + +L +MR G P LV Y LAAL + GM+++A +E M K +
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE-MHKNCKLD 463
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y+ ++ G C + A +LK M + G + + TY +L++ G A RV
Sbjct: 464 VV-AYSTMIHGACRLRDRKSAEEFLKHMLDE-GLIPDSVTYSMLINMFANSGDLGAAERV 521
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L++M + P V ++ LI+G + G + + + EM ++ DI++ S +++++
Sbjct: 522 LKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK----DIALDSKIISTI 575
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 12/242 (4%)
Query: 244 AMQILEKILRKGLKAPKSRRHRI-DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A L +LR+G +R +R+ L P + + + + +A+ SY+ +
Sbjct: 34 AAPFLAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAV---------SYNTV 84
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L +G ++ L + P+ V Y + AL + +A+ ++ + G
Sbjct: 85 LAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGV 144
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P V Y L++GLCDA + AV L++M + G N Y L+ G C+ GR+
Sbjct: 145 R-PDVVTYGTLIRGLCDAADVDKAVELLREMCES-GIEPNVVVYSCLLQGYCKAGRWECV 202
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
S+V EEM R P V Y LI LC GK +A +++M+ + P++ ++ L+ S
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINS 262
Query: 483 VC 484
+C
Sbjct: 263 MC 264
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 5/263 (1%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKS 282
D++ Y + LC +G+I +AM+I ++ KG AP S + I + C D + +E S
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKG-SAPDSFTYNILINGLCKDAQ-LEMGVS 147
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L++E RG P++ +Y+ + GR+ +LDEM +G P+ V Y A + L
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 343 KDGMVDEALEVIEEEMVKGT-FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G V+ A+ V++E ++G P V Y L+ GLC G + + +L +M GC
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS-GCFP 266
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N TY L+ GLC+ G FLEA+ +L EM+ V YN LI GLC +G+ A
Sbjct: 267 NNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQ 326
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
M+ + PD+ ++SL+ +C
Sbjct: 327 ILMVEKGVAPDVFTYTSLIQGLC 349
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 44/322 (13%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + A+ +F+EM+ +G PD +Y+IL+ GLC D +L L+ M R G
Sbjct: 101 LCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQAR----G 156
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+V Y TL+ C G++ AM IL+++ +G+
Sbjct: 157 FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGIT----------------------- 193
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--WPSLVMYEAKL 338
P+ +Y+A+ L + G + VL EM+ +G P++V Y +
Sbjct: 194 -------------PNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLI 240
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L + G+ + +E ++E ++ G F P Y L+ GLC G+ A + L +M +G
Sbjct: 241 HGLCQKGLFEMGMEFLDEMIISGCF-PNNATYTALIHGLCQKGSFLEAAVLLNEMVA-IG 298
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C + Y L+DGLC+ G A + M+ + P V TY LI+GLC G EA+
Sbjct: 299 CELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEAL 358
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
++EM ++ +P+ +++L+
Sbjct: 359 GLMQEMRAKGIVPNSVTYTTLI 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 148/355 (41%), Gaps = 50/355 (14%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A++IF+E +EK + Y +I L + ++ ++D+M+ + T
Sbjct: 110 AMEIFREMEEK--GSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTL 167
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--CYG 144
I + AG+++ A+ + + T ++ L++ + ++E A IL L+ G
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERA-ILVLKEMKLRG 226
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
E + + L+ LCQ ++ + EM GC+P+ +Y L+ GLC E
Sbjct: 227 NECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLE 286
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA--MQILEKILRKGLKAPKSR 262
A LL M G D+VIY +L+ LC G++ A MQIL ++ KG+
Sbjct: 287 AAVLLNEMV----AIGCELDVVIYNSLIDGLCKMGELDFAREMQIL--MVEKGVA----- 335
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
P + +Y+++ L + G + E ++ EM
Sbjct: 336 -------------------------------PDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
R KG P+ V Y + + D AL+++ EM +P +Y IL K L
Sbjct: 365 RAKGIVPNSVTYTTLINGFTQADRTDHALQLV-NEMKSNGLMPAGDIYKILFKSL 418
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 208/470 (44%), Gaps = 37/470 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + ++V QM + + + T I +A +++ A +F+ +
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++NT++ + K ++ A +F + VK + N ++D LC+ +
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF-QQMIDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--- 223
D A VFQ+M +G PD +Y I++ GLC + ++ A + M + + +G
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 224 ----------------------------DIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
D+ Y LL LC GK +A + + ++RKG
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+K P + I L + L+N + G P+ ++ + I E
Sbjct: 466 IK-PSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEV 524
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ +M+ +G P++V Y + AL K G VD+A+ + +M+ P V+N L+
Sbjct: 525 MHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV-LQFNQMINEGVTPNNVVFNSLVY 583
Query: 376 GLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC V ++L+ +++ G + + ++ LC++GR +EA R+++ M+
Sbjct: 584 GLCTVDKWEKVEELFLEMLNQ--GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V +YN LI G C + EAV L+ M+S P+I +++L+ C
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 201/433 (46%), Gaps = 28/433 (6%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
+S NR+ +++ +++ D C ++ I + R G+L + F + + W
Sbjct: 66 VSRFNRM--LRDCSNKVAPDCC-----TYSIVIGCFCRIGRLELGFAAFGLILK---TGW 115
Query: 115 TQS---FNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
N LLK + ++ EA H+L LR + + S N L+ LC RR++ A
Sbjct: 116 RVDDIVVNQLLKGLCDTKRVGEAMHVL-LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEA 174
Query: 171 ---LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
LH+ + C PD SY+I++ G N+ ++++A YS+F + G D+V
Sbjct: 175 RELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKA----YSLFLEM---GVSPDVVT 227
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC ++ A + ++++ KG+K P + + + ++++ A+ + +
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVK-PNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ +G PS +Y+ + L + + V +M +G P V Y + L K +
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAI 346
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A V ++ + KG P Y I++ GLC A + A ++M + G N TY
Sbjct: 347 DKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK-GVKPNNGTYN 404
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ G G++ E + ++EM P V TY +L+ LC GK EA + MI +
Sbjct: 405 CLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK 464
Query: 468 AKLPDISVWSSLV 480
P ++++ ++
Sbjct: 465 GIKPSVTIYGIML 477
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 167/361 (46%), Gaps = 16/361 (4%)
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHI 191
AA L L++ GW V + +N L+ LC +R A+HV ++M GC SY+
Sbjct: 105 AAFGLILKT--GWRVDDIV--VNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNT 160
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+KGLC+ RR EA LL+ M D+V Y ++ ++G++ A +
Sbjct: 161 LLKGLCDRRRAEEARELLH-MMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF--- 216
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L G+ +P + + ++++ A+ + + + +G P+ +Y+ + L
Sbjct: 217 LEMGV-SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + V +M KG PS V Y + L K VD A E + ++M+ P YN
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRA-EGVFQQMIDRGVKPDHVTYN 334
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++ GLC A A ++M + G + TY I++DGLC+ A V ++M+
Sbjct: 335 TIIDGLCKAQAIDKAEGVFQQMIDK-GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC----CNT 487
+ P TYN LI G S G+ E V ++EM + PD+ + L+ +C CN
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453
Query: 488 A 488
A
Sbjct: 454 A 454
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 214/475 (45%), Gaps = 18/475 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LT T + + K +S A +F++ +K + N Y +I + + E+
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK--GVKPNNGTYNCLIHGYLSTGQWEEVV 420
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ I +M E + + + G+ NEA SLF ++ + + +L
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480
Query: 126 VKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K+ L H +L L G RI N ++ + D +H+F +M QG P
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRI--FNTVICAYAKRAMIDEVMHIFIKMKQQGLSP 538
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y L+ LC R+++A F ++ +G + V++ +L++ LC K +
Sbjct: 539 NVVTYGTLIDALCKLGRVDDAV----LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKV 594
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ ++L +G++ P LC C +G +E A+ LI+ + G P + SY+ +
Sbjct: 595 EELFLEMLNQGIR-PDIVFFNTVLCNLCKEGRVME-ARRLIDSMVCMGLKPDVISYNTLI 652
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
R+ E K+LD M + G P++V Y L K G +D A + E + KG
Sbjct: 653 DGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV- 711
Query: 364 VPTVRVYNILLKGLCDAGN-SAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLE 421
P V YN +L GL +G S +Y+ + S+++ + TY I++DG C++ F E
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC---TYSIILDGFCKNNCFDE 768
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
A ++ + + + T+N++I GL G++ +A+ + + +P + +
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTY 823
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 201/468 (42%), Gaps = 41/468 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ I + + V QM + + + I +A ++ A +F+ +
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N L+ + + E + ++ +++ + + LL+D LC+ +
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEEV-VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------------- 212
+ A +F M +G P Y I++ G L+E LL M
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 213 -----------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
F ++ Q+G ++V Y TL+ ALC G++ DA+ +++ +G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 256 LKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ + + LC + E +E L E L +G P + ++ + +L EGR++
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVE---ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +++D M G P ++ Y + +DEA+++++ MV P + YN L
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG-MVSAGLKPNIVSYNTL 686
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML-IR 432
L G C AG A ++M ++ G ETY +++GL R GRF EA + M+ R
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRK-GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
W + TY++++ G C EA + + S DI ++ ++
Sbjct: 746 KLWS-ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 190/440 (43%), Gaps = 20/440 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L ++ + E + + D M + +++ + Y + G L+E L NL
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL-NL 495
Query: 107 SQFNCVNWTQS-FNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
N ++ FNT++ K + + E HI G + + + L+D LC+
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG--LSPNVVTYGTLIDALCKL 553
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R D A+ F +M +G P+ ++ L+ GLC + + L M +G D
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML----NQGIRPD 609
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
IV + T+L LC +G++ +A ++++ ++ GLK + + C E K L
Sbjct: 610 IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL- 668
Query: 285 NEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ ++ G+ P++ SY+ + GRI + EM KG P + Y L LF+
Sbjct: 669 -DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAVAVMY-LKKMSKQVGCV 400
G EA E + M+K + ++ Y+I+L G C + + A + L M Q+ +
Sbjct: 728 SGRFSEARE-LYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDII 786
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
T+ I++DGL + GR +A + + P V TY ++ L G E
Sbjct: 787 ----TFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842
Query: 461 LEEMISQAKLPDISVWSSLV 480
M P+ + ++L+
Sbjct: 843 FSVMEKSGTAPNSHMLNALI 862
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 24/348 (6%)
Query: 149 SRIQSLNLLMDVLCQCR---RSDLALHVFQEMDFQGC----YPDRESYHILMKGLCNDRR 201
+ +++LN L+ V+ + + S LA+ F M + C PD +Y I++ C R
Sbjct: 41 ASVRALNQLLSVVSRAKCSSSSKLAVSRFNRM-LRDCSNKVAPDCCTYSIVIGCFCRIGR 99
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL-----RKGL 256
L L ++ F I + G D ++ LL LCD ++ +AM +L + + R G+
Sbjct: 100 L----ELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGV 155
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + LC E+ ++ + P + SY+ + +NEG++ +
Sbjct: 156 VSYNTLLK--GLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAY 213
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ EM G P +V Y + L K VD A +V ++ + KG P YN ++ G
Sbjct: 214 SLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV-KPNNVTYNTIIDG 269
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC A +A +KM + G + TY ++DGLC+ A V ++M+ R P
Sbjct: 270 LCKAQEVDMAEGVFQKMVDK-GVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP 328
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN +I GLC +A ++MI + PD ++ ++ +C
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 152/392 (38%), Gaps = 44/392 (11%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PN+R ++ ++I ++ I E+ + +MK + T I + G++++
Sbjct: 503 PNHR----IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
AV F + FN+L+ + K E LFL ++ I N ++
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM-LNQGIRPDIVFFNTVL 617
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC+ R A + M G PD SY+ L+ G C R++EA LL M
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV----S 673
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G +IV Y TLL C G+I +A + ++LRKG+ + I G E
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 279 GAKSLIN------------EALIRGGI----------------------PSLASYSAMAI 304
+ +N ++I G + +++ M
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L+ GR + + + G PS+V Y L ++G ++E L+ + M K
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE-LDCLFSVMEKSGTA 852
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
P + N L++ L D G A YL K+ ++
Sbjct: 853 PNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 206/500 (41%), Gaps = 59/500 (11%)
Query: 32 KEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+EAK+ + + G V Y M+ S+ I E +++ +M + CE V +
Sbjct: 487 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSL 546
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSC 142
I T +A +++EA +F + + ++NTLL + K K++ A LF + C
Sbjct: 547 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 606
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ N L D LC+ LAL + +M GC PD +Y+ ++ GL + ++
Sbjct: 607 -----PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 661
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL---------- 252
EA + M +K D V TLL + G I+DA +I+ L
Sbjct: 662 KEAMCFFHQM-----KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANL 716
Query: 253 -----------RKGLKAPKSRRHR-IDLCPCNDGEDI--------------EGAKSLINE 286
G+ S R + C DG+ I GA+ L +
Sbjct: 717 FWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEK 776
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G+ P L +Y+ + L I V +++ G P + Y L A K G
Sbjct: 777 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSG 836
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGE 404
+DE E I +EM P +NI++ GL AGN A+ +Y MS +
Sbjct: 837 KIDELFE-IYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR-DFSPTAC 894
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TYG L+DGL + GR EA ++ E M P YN+LI G G+ A + M
Sbjct: 895 TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + PD+ +S LV +C
Sbjct: 955 VKEGVRPDLKTYSVLVDCLC 974
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 193/477 (40%), Gaps = 42/477 (8%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + Y+S++ L + I + ++ +M+ + F IR RAG++NEA
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ K + C ++ L+ + KL+ A +F + G R+ + LL D
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLL-DR 339
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
R D + EM+ G PD ++ IL+ LC EA ++ + +G
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA----FAKLDVMRDQG 395
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++ Y TL+ L ++ DA++I + + G+K P + + + + D A
Sbjct: 396 ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK-PTAYTYIVFIDYYGKSGDSVSA 454
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ +G P++ + +A L GR E ++ ++ G P V Y +
Sbjct: 455 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514
Query: 341 LFKDGMVDEALEVIEE----------------------------------EMVKGTFVPT 366
K G +DEA++++ E M + PT
Sbjct: 515 YSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V YN LL GL G A+ + M Q GC N T+ L D LC++ A ++L
Sbjct: 575 VVTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKML 633
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+M+ P V TYN +I GL G+ EA+ + +M + PD +L+ V
Sbjct: 634 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGV 689
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 7/329 (2%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P Y +IG L E++ I ++V Q+K C + + + Y ++G+++E ++K
Sbjct: 788 PTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKE 847
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+S C T + N ++ +VK ++ A L+ + + L+D L +
Sbjct: 848 MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R A +F+ M GC P+ Y+IL+ G + A ++F R+ ++G D+
Sbjct: 908 RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC----ALFKRMVKEGVRPDL 963
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ LC G++ + + ++ GL P + + + +E A L N
Sbjct: 964 KTYSVLVDCLCMVGRVDEGLHYFRELKESGLN-PDVVCYNLIINGLGKFHRLEEALVLFN 1022
Query: 286 E-ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E RG P L +Y+++ ++L G + E K+ +E++ G P++ + A +
Sbjct: 1023 EMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1082
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
G + A V + MV G F P Y L
Sbjct: 1083 GKPEHAYAVY-QTMVTGGFSPNTGTYEQL 1110
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 15/394 (3%)
Query: 91 ARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
A AG ++ AVS + L + C + +++ K + A +LF + V+
Sbjct: 727 AEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQP 785
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ + NLL+ L + ++A VF ++ GC PD +Y+ L+ +++E L
Sbjct: 786 KLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE----L 841
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+ ++ +S + + + ++ L G + DA+ + ++ +P + +
Sbjct: 842 FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG---- 897
Query: 270 PCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P DG G AK L G P+ A Y+ + G + M +
Sbjct: 898 PLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P L Y + L G VDE L E G P V YN+++ GL
Sbjct: 958 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG-LNPDVVCYNLIINGLGKFHRLEE 1016
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ +M K G + TY L+ L G EA ++ E+ P V T+N LI
Sbjct: 1017 ALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1076
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
RG GK A + M++ P+ + L
Sbjct: 1077 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 7/300 (2%)
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+VF M + D +Y + K L L +A L M + G + Y L
Sbjct: 141 YVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM----REFGFVLNAYSYNGL 196
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ L +AM++ +++ G + P + + + DIE L+ E G
Sbjct: 197 IHLLLKSRFCTEAMEVYRRMILDGFR-PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLG 255
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +++ L G+I E ++L M +G P +V Y + AL +D A
Sbjct: 256 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 315
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
EV + M G P Y LL D + + +M K G V + T+ ILVD
Sbjct: 316 EVFAK-MKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD-GHVPDVVTFTILVD 373
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
LC+ G F EA L+ M + P + TYN LI GL + + +A+ + M S P
Sbjct: 374 ALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKP 433
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 202/498 (40%), Gaps = 55/498 (11%)
Query: 31 FKEAKEKYPNYRHNG-----PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EAK + R NG Y M+ S+ ++ E ++ +M + CE V +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + +AG+++EA +F + ++NTLL + KE +++ A LF S
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF-ESMIXK 606
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N L+D C+ +LAL +F +M C PD +Y+ ++ GL + ++N A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Query: 206 THLLYSMFWRISQ--KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
FW Q K D V TLL L G+I DA+ I + + ++ +R
Sbjct: 667 -------FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQ-VRFRVNRS 718
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI------------------------------ 293
DL E + E L+ GI
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778
Query: 294 -------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+LASY+ + +L + + +M+ G P + LA K G
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ E E+ +E M+ P YNI++ L + N A+ + + TY
Sbjct: 839 ITELFELYKE-MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTY 896
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
G L+DGL + GR EA R+ EEM P +N+LI G IG A + M++
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD+ ++ LV +C
Sbjct: 957 EGIRPDLKSYTILVDCLC 974
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/539 (22%), Positives = 216/539 (40%), Gaps = 77/539 (14%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K P+ AL F E +P H M+ L +++ +M V + M+
Sbjct: 95 VLKSMTDPIRALSYFYSISE-FPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKII 153
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
+ T + + G L + ++ + + V S+N L+ ++ +S +
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI-QSGFCGEAL 212
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
R +K +++ + LM L + R S++ + + +EM+ G P+ ++ I ++ L
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+++EA Y +F R+ +G G D+V Y L+ ALC+ G++++A ++ K+ G
Sbjct: 273 GRAGKIDEA----YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSL----------------------------INEAL 288
K P + L ND D++ K +EA
Sbjct: 329 K-PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 289 I-------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+G +P+L +Y+ + L GRI + K+LD M + G P+ Y +
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447
Query: 342 FKDGMVDEALEVIEEEMVKGT----------------------------------FVPTV 367
K G +A+E E+ KG P
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN+++K G AV L +M + GC + L+D L + GR EA ++ +
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRN-GCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
M P V TYN L+ GL G+ +A+ E MI + P+ +++L+ C N
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKN 625
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 201/491 (40%), Gaps = 32/491 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T + L + K++ + + KE ++ R N + I +L + +I E
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDL--GLRPNVYTFTICIRVLGRAGKIDEAY 282
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-------SQFNCVNWTQSF 118
E+ +M + C + I AGQL A LF + Q + F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 119 NTLLK-EMVKE--SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
N + KE S++EA + + + +L+DVLC+ R D A F
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYM-----------PDVVTFTILVDVLCKARDFDEAFATFD 391
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
M QG P+ +Y+ L+ GL R+ +A LL +M G Y T +
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM----ESVGVQPTAYTYITFIDYF 447
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
G+ A++ EK+ KG+ P L + + AK++ N G P
Sbjct: 448 GKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ M G++ E +L EM G P +++ + + +L+K G VDEA ++ +
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
M PTV YN LL GL G A+ + M + C N ++ L+D C+
Sbjct: 567 R-MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK-KCSPNTISFNTLLDCFCK 624
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD-IS 474
+ A ++ +M + P V TYN +I GL K A W + ++ PD ++
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA-FWFFHQLKKSMHPDHVT 683
Query: 475 VWSSLVASVCC 485
+ + L V C
Sbjct: 684 ICTLLPGLVKC 694
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 203/504 (40%), Gaps = 71/504 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V S+I L ++ R+ E ++ D+MK + T + + G++ +A+ LF+++
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C T SFNTLL K ++E A +F + + K + + N ++ L + +
Sbjct: 604 IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV-MDCKPDVLTYNTVIYGLIKENK 662
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL----LYSM-------FWR 215
+ A F ++ + +PD + L+ GL ++ +A + +Y + FW
Sbjct: 663 VNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721
Query: 216 ISQKGSGEDIVIYRTLLFA---------------------LCDQGKIQDAMQILEKILRK 254
G+ + + + ++FA LC + A QI +K +K
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+P + + + E A L + G P +++ + G+I E
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ EM ++ P + Y +++L K +D+AL+ + +V F PT R Y L+
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD-LVSSDFRPTPRTYGPLI 900
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVAN--------------GET--------------- 405
GL G A+ ++MS GC N G+T
Sbjct: 901 DGLAKVGRLEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 406 ------YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
Y ILVD LC GR EA E+ P YN +I GL + EA+
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
EM ++ +PD+ ++SL+ ++
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNL 1043
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 163/409 (39%), Gaps = 52/409 (12%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYAS---MIGILSESNR 60
R L P L +++ K K L A +IF +K+ P AS +IG L E +
Sbjct: 750 REDSFLIP--LVRVLCKHKRELYAYQIF----DKFTKKLGISPTLASYNCLIGELLEVHY 803
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ ++ MK C F + + ++G++ E L+K + C ++N
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
++ + K + L+ A + F + + ++ L+D L + R + A+ +F+EM
Sbjct: 864 VISSLAKSNNLDKA-LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P+ ++IL+ G A L F R+ +G D+ Y L+ LC G+
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQL----FKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ +A+ ++ GL P +Y+
Sbjct: 979 VDEALYYFNELKSTGLD------------------------------------PDFIAYN 1002
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L R+ E + +EMR +G P L Y + + L GMV++A + EE +
Sbjct: 1003 RIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
G P V YN L++G + N A K M GC N TY L
Sbjct: 1063 G-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQL 1109
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 193/456 (42%), Gaps = 13/456 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F +K + + + Y ++I L + N++ Q+K S T
Sbjct: 631 ALKMF--SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF-NTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + GQ+ +A+S+ ++ +SF L+ + E++++ A I+F
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA-IIFAEELVLN 746
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNE 204
+ L L+ VLC+ +R A +F + + G P SY+ L+ L +
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A + +F + G D + LL GKI + ++ ++++ + K P + +
Sbjct: 807 A----WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCK-PDAITY 861
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ A + + P+ +Y + L GR+ E ++ +EM
Sbjct: 862 NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P+ ++ + K G + A ++ + MV P ++ Y IL+ LC AG
Sbjct: 922 YGCKPNCAIFNILINGYGKIGDTETACQLFKR-MVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ Y ++ K G + Y +++GL + R EA + EM R P + TYN L
Sbjct: 981 EALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ L G +A EE+ PD+ +++L+
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 50/405 (12%)
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAHIL 137
+DS +R + + A +F ++ ++ T S+N L+ E+++ E A L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
F + + N+L+ V + + +++EM + C PD +Y+I++ L
Sbjct: 811 F-KDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869
Query: 198 NDRRLNEATHLLYSMF---WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
L++A Y + +R + + Y L+ L G++++AM++ E++
Sbjct: 870 KSNNLDKALDFFYDLVSSDFRPTPR-------TYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G K P I + D E A L + G P L SY+ + L GR+ E
Sbjct: 923 GCK-PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+E+++ G P + Y + L K ++EAL + E +G VP + YN L+
Sbjct: 982 ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG-IVPDLYTYNSLM 1040
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
L AG M +Q A R+ EE+ +
Sbjct: 1041 LNLGLAG-----------MVEQ-------------------------AKRMYEELQLAGL 1064
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
P V TYN LIRG A + M+ P+I ++ L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 190/408 (46%), Gaps = 17/408 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + + AG+ +EA L +++F + +L ++ + EA + +S
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRL---VAEFKDTGMSPGSLVVLHNLMLKGFSEARLVDEAKS 72
Query: 142 -CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + K S N L+D LC R A Q M +G P+R +Y+ + GL
Sbjct: 73 HLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAG 132
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L+EA L+ M G V + ++ LC GK +A +++E +L + ++
Sbjct: 133 LLDEAFELMGVM----ESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNI 188
Query: 261 SRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ I C E+ G ++ E G P++ +++A+ N ++ ++
Sbjct: 189 LTLNLILHAFCKAARPEEALGMTDIMVEM---GFCPTIVTFNALLELFCNTDQMDSAAEL 245
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+ M P+ V Y + + G + EA +E+ +V G + P + V N + GLC
Sbjct: 246 LETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCG-YAPNLLVCNAYVAGLC 304
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G +A +L M+++ GC AN TY LV+G C+ GR EA RVLEEM+ P
Sbjct: 305 KTGEMDLASRFLTVMAEE-GCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDS 363
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMIS--QAKLPDISVWSSLVASVC 484
TY+VLI+GLCS G+ A M + ++ ++ PD + + L+ +C
Sbjct: 364 TTYSVLIQGLCSAGQIVHAFMVMLQVTRAVESARPDPATFVKLIEKLC 411
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 179/408 (43%), Gaps = 20/408 (4%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGI-------LSESNRITEMKEVIDQMKGDSCECKDSVF 83
F EAK ++ G S++ + SE+ + E K + +M C+ +
Sbjct: 30 FDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEARLVDEAKSHLHRM---DCKPNSVSY 86
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSC 142
T I +G++ EA + +++ ++N + + K L EA ++ +
Sbjct: 87 NTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMES 146
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G+ + + + N +++ LC+ + D A V + M + P+ + ++++ C R
Sbjct: 147 AGFALTA--VTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARP 204
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA M + + G IV + LL C+ ++ A ++LE + R K P
Sbjct: 205 EEA----LGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCK-PNFV 259
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I + + + A++ + + ++ G P+L +A L G + + L M
Sbjct: 260 TYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVM 319
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+G + Y + + K G +DEA V+EE + +G+ +P Y++L++GLC AG
Sbjct: 320 AEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGS-LPDSTTYSVLIQGLCSAGQ 378
Query: 383 SAVAVMYLKKMSKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEM 429
A M + ++++ V + T+ L++ LC G A+ VLE M
Sbjct: 379 IVHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 7/338 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + N+LM + + + A +VF EM +G P +++ LM G+C LN A
Sbjct: 238 VPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNAN 297
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M ++ G D+ Y + LC G+IQDAM++ E++ +GL +
Sbjct: 298 ALRGLM----AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 353
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G D+ L E RG L +Y+A+ + + +++EMR G
Sbjct: 354 IDAHCKEG-DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 412
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K+G +D A+E+ +E +G + V Y L+ GL AG S A
Sbjct: 413 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV-TYTALISGLSKAGRSVDA 471
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +M + G + TY +++D C++G + L+EM + P + TYNV++
Sbjct: 472 ERILCEM-MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 530
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G CS+G+ A M L M++ P+ ++ L+ C
Sbjct: 531 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 568
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 12/338 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL-FLRS 141
F +R R+G+L A ++F + + +FNTL+ M K S L A+ L L +
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + + + LC+ R A+ +F+EM +G P+ L+ C +
Sbjct: 305 KAG--IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 362
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK- 260
+ L W ++ +G D+V Y L+ C ++ A I+E++ + GLK K
Sbjct: 363 VTAGLELR----WEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 418
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ ID C C +GE ++ A + E G +Y+A+ L GR V+ +++L
Sbjct: 419 TYTTLIDGC-CKEGE-LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 476
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM G P Y + A K+G V + ++E KG P + YN+++ G C
Sbjct: 477 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKN-PGIVTYNVVMNGFCSL 535
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
G A M L M +G N TY IL+DG C+ G+
Sbjct: 536 GQMKNADMLLNAM-LNIGVCPNDITYNILLDGHCKHGK 572
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 180/403 (44%), Gaps = 39/403 (9%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVK 148
R + EA + + +L + FN L+++M++ KL +A +F LR V+
Sbjct: 219 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRR----GVQ 274
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + N LM +C+ + A + M G PD +Y ++GLC R+ +A
Sbjct: 275 PTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDA--- 331
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
MF + ++G + V+ TL+ A C +G + +++ ++ +G+KA DL
Sbjct: 332 -MEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKA--------DL 382
Query: 269 CPCN---DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
N +G D++ A ++ E G P +Y+ + EG + ++ E
Sbjct: 383 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 442
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G V Y A ++ L K G +A E I EM++ P Y +++ C G
Sbjct: 443 MSDEGVALDDVTYTALISGLSKAGRSVDA-ERILCEMMEAGLQPDNTTYTMVIDAFCKNG 501
Query: 382 NSAVAVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ +LK+M K G V TY ++++G C G+ A +L ML P
Sbjct: 502 DVKTGFKHLKEMQNKGKNPGIV----TYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPND 557
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMIS-QAKLPDISVWSSLV 480
TYN+L+ G C GK V EE+ S + + D V++SL+
Sbjct: 558 ITYNILLDGHCKHGK----VRDTEELKSAKGMVSDFGVYTSLI 596
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 8/295 (2%)
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--D 267
Y+ + + G + + L+ + GK+ A + +++LR+G++ + +
Sbjct: 227 YAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG 286
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+C +D + + L+ +A G P + +Y A L GRI + ++ +EM +G
Sbjct: 287 MCKASDLNNANALRGLMAKA---GIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGL 343
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ V+ + A K+G V LE+ E +G V YN L+ G C + A
Sbjct: 344 NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLV-AYNALVNGFCRVRDMKAAN 402
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+++M K G + TY L+DG C++G A + +EM TY LI G
Sbjct: 403 DIVEEMRKD-GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 461
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
L G+ +A L EM+ PD + ++ ++ + C N D+ K L+++ +
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKN-GDVKTGFKHLKEMQN 515
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 7/266 (2%)
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
D+G + D +L LR+G++ P + N + A + L G P
Sbjct: 186 ADEGLLPDGCSLLLLALRRGIRVPMPAWSDL----MNRLPSVPEAYAFYLHLLDAGVPPE 241
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
++ + D+ G++ V DEM +G P++V + ++ + K ++ A +
Sbjct: 242 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA-NALR 300
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
M K P V Y ++GLC G A+ ++M ++ G N L+D C+
Sbjct: 301 GLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER-GLNPNTVVLTTLIDAHCK 359
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G + EM R + YN L+ G C + A +EEM PD
Sbjct: 360 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 419
Query: 476 WSSLVASVCCNTADLNVCRKTLEQLS 501
+++L+ CC +L+ + +++S
Sbjct: 420 YTTLIDG-CCKEGELDTAMEMKQEMS 444
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 211/474 (44%), Gaps = 50/474 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L S+R E+ ++ +M+G + + I + R G EA+ LF +
Sbjct: 303 TFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKS---------------R 150
+ ++N + + + KE ++E A IL G + S R
Sbjct: 363 VSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGR 422
Query: 151 IQSL---------------NLLMDV----LCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
++S+ + LM LCQ RR A+ ++ +M +G + + +
Sbjct: 423 LESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNA 482
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ GLC + + AT +L +M KG D + Y ++ C KI++A+++ + +
Sbjct: 483 LIHGLCEGKNMKGATEVLRTMV----NKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM 538
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+RKG K + I C+ G+ +E A L+ + I G P + SY + ID Y + +
Sbjct: 539 IRKGFKPDAYMFNSIIHAYCDLGK-MEEALHLLGQMKIEGVQPDVVSYGTI-IDGYCKAK 596
Query: 312 -IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
I + ++ L+E+ G P+ V+Y A + ++G + A+ V++ M PT Y
Sbjct: 597 DIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDT-MESIGIQPTNVTY 655
Query: 371 NILLKGLCDAG---NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
L+ +C AG + +K S +VG V Y I++ GLC+ G+ EA E
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVG----YTIMIQGLCKIGKMDEAMNYFE 711
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
EM RS P TY L+ C G EA +EM+S +PD +++LV
Sbjct: 712 EMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVT 765
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 189/420 (45%), Gaps = 11/420 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRSCY-G 144
+ AR G L +F + V S+ +++K + K K++ + + G
Sbjct: 200 LEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAG 259
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+ + NLLMD LC+ R D A+ + M+ P ++ IL+ GL R E
Sbjct: 260 LQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGE 319
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
LL M G + VI L+ C +G +A+++ ++++ K +K+ +
Sbjct: 320 VGALLREM----EGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYN 375
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
I C +GE +E A+ ++ E L G I S S +A L GR+ +++ EM
Sbjct: 376 LIARALCKEGE-MERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMV 434
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ + A L + EA+ + + + KG + + N L+ GLC+ N
Sbjct: 435 KRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI-NIATSNALIHGLCEGKNM 493
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L+ M + G + TY I++ G C+D + EA ++ ++M+ + + P +N
Sbjct: 494 KGATEVLRTMVNK-GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNS 552
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSC 503
+I C +GK EA+ L +M + PD+ + +++ C D+ + L +L +C
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGY-CKAKDIQKANEYLNELMAC 611
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 186/429 (43%), Gaps = 48/429 (11%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
H+G + + G+L + R+ + +I +M + D++ + + + EAV +
Sbjct: 405 HSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGI 464
Query: 103 -FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
K L + C+N I + N L+ L
Sbjct: 465 WLKMLEKGLCIN-------------------------------------IATSNALIHGL 487
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A V + M +G D +Y+I+++G C D ++ EA L M +KG
Sbjct: 488 CEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMI----RKGF 543
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D ++ +++ A CD GK+++A+ +L ++ +G++ I C +DI+ A
Sbjct: 544 KPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCK-AKDIQKAN 602
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+NE + G P+ Y+A+ G I VLD M + G P+ V Y + + +
Sbjct: 603 EYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWM 662
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G+VDEA + E+ K + V Y I+++GLC G A+ Y ++M +
Sbjct: 663 CHAGLVDEAKTMFEQSR-KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSR-SIPP 720
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC---SIGKQYEAV 458
N TY L+ C+ G EAS++ +EM+ P +YN L+ G S+ K E
Sbjct: 721 NKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKA 780
Query: 459 MWLEEMISQ 467
+ +++Q
Sbjct: 781 AEISSIMTQ 789
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT-KGFWPSLVMYEAKLAALFKDGMVD 348
R PS+ + +A+ L G + KV DEMR K P+ Y + + AL K G VD
Sbjct: 187 RRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVD 246
Query: 349 EALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ +++ + + G V YN+L+ LC +G A+ LK ++ + T+G
Sbjct: 247 DGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAI-RLKGRMEESRVAPSMVTFG 305
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL++GL R RF E +L EM P N LI C G EA+ +EM+S+
Sbjct: 306 ILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSK 365
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
++ +V +L+A C ++ + LE++ S
Sbjct: 366 -EMKSTAVTYNLIARALCKEGEMERAERILEEMLS 399
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y ++IG + I+ V+D M+ + + + + + AG ++EA +
Sbjct: 614 KPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKT 673
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-----L 156
+F+ + + + +++ + K K++ A F E++SR N
Sbjct: 674 MFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYF------EEMRSRSIPPNKITYTT 727
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
LM C+ ++ A +F EM G PD SY+ L+ G L++A + +
Sbjct: 728 LMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIM 787
Query: 217 SQKGSGEDIVIYR 229
+Q +++++ R
Sbjct: 788 TQNDCLDNVLVNR 800
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 182/400 (45%), Gaps = 10/400 (2%)
Query: 85 TAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+ +A+ K L+Q +N S+ TL+ + K A I LR
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRGA-IKLLRKID 439
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G K ++ + ++D LC+ + A +F EM +G D +Y L+ G C +L
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M K D+ Y L+ AL +GK+++A +L +L+ +K P
Sbjct: 500 EAIGLLNEMVL----KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK-PDVFT 554
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + +++ A+ + N + G P + +Y+ + + E + EM
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
K P V Y + + L K G + ++I+E +G + YN L+ GLC G+
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI-TYNSLIDGLCKNGHL 673
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A+ KM Q G N T+ IL+DGLC+ GR +A V +++L + Y V YNV
Sbjct: 674 DKAIALFNKMKDQ-GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+I G C G EA+ L +M +P+ + ++ ++
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 190/399 (47%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGW 145
I + GQ+ S+ + + T + NTL+K + + +++ A H G+
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
++ S L++ +C+ + A+ + +++D + P+ E Y ++ LC + ++EA
Sbjct: 409 QLNQ--VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y +F ++ KG D+V Y TL++ C GK+++A+ +L +++ K + P R +
Sbjct: 467 ----YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN-PDVRTYT 521
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
I + ++ AKS++ L P + +Y+ + + + V + M
Sbjct: 522 ILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLM 581
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P + Y + K MVDEAL + +E M + VP Y+ L+ GLC +G +
Sbjct: 582 GVTPDVHTYTILINGFCKSKMVDEALNLFKE-MHQKNMVPDTVTYSSLVDGLCKSGRISY 640
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ +M + G A+ TY L+DGLC++G +A + +M + P T+ +L+
Sbjct: 641 VWDLIDEMRDR-GQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +A ++++++ D+ +++ ++ C
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 198/473 (41%), Gaps = 87/473 (18%)
Query: 85 TAIRTYARAGQLNEAVSLF-KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I+ GQ+ EA+ K L+Q +N S+ TL+ + + AA I FLR
Sbjct: 68 TLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV-SYATLINGVCRIGDTRAA-IKFLRKID 125
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G K ++ N ++D LC+ + A +F EM +G + +Y L+ G C +L
Sbjct: 126 GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLK 185
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA LL M K ++ Y L+ ALC +GK+++A +L +L+ +K+
Sbjct: 186 EALGLLNVMVL----KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS----- 236
Query: 264 HRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLY 307
+ I DG +++ A+ + N + G P + SY+ M A++L+
Sbjct: 237 NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF 296
Query: 308 NE------GRIVEGDKVLDE----------------MRTKGFWPSLVMYEAKLAALFKDG 345
E I++ +K+LD + KG P L + G
Sbjct: 297 KEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ V+ + + +G + P+ N L+KGLC G A+ + K+ Q G N +
Sbjct: 357 QITFGFSVLAKILKRG-YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ-GFQLNQVS 414
Query: 406 YGILVDGLCR--------------DGRFL---------------------EASRVLEEML 430
Y L++G+C+ DGR EA + EM
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 474
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
++ V TY+ LI G C +GK EA+ L EM+ + PD+ ++ LV ++
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 170/394 (43%), Gaps = 49/394 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y+++I L + ++E + +M ++T I + G+L EA+
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL--FLRSCYGWEVKSRIQSLNLLM 158
L + +++ L+ + KE K+ EA +L L++C VK + + N LM
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC----VKPDVFTYNTLM 559
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ A HVF M G PD +Y IL+ G C + ++EA +L F + Q
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNL----FKEMHQ 615
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
K D V Y +L+ LC G+I
Sbjct: 616 KNMVPDTVTYSSLVDGLCKSGRISYVWD-------------------------------- 643
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
LI+E RG + +Y+++ L G + + + ++M+ +G P+ + L
Sbjct: 644 ----LIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K G + +A EV ++ + KG + V +YN+++ G C G A+ L KM + G
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHL-DVYIYNVMIYGHCKQGLLEEALTMLSKMEEN-G 757
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
C+ N T+ I+++ L + +A ++L +M+ R
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 185/406 (45%), Gaps = 21/406 (5%)
Query: 87 IRTYARAGQLNEAVSLFKN--LSQFNCVNWTQSFNTLLKEMVK----ESKLEAAHILFLR 140
I + + ++++A++LFK LS+F + FN +L K + + +H L L+
Sbjct: 280 INGFCKIKRVDKALNLFKEMILSRFPPI---IQFNKILDSFAKMKHYSTAVSLSHRLELK 336
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
++ + +LN+L++ C + V ++ +G P + + L+KGLC
Sbjct: 337 G-----IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ +A H ++ +G + V Y TL+ +C G + A+++L KI + L P
Sbjct: 392 QVKKALHF----HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR-LTKPN 446
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + + A L +E ++G + +YS + G++ E +L+
Sbjct: 447 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P + Y + AL K+G V EA V+ M+K P V YN L+ G
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAV-MLKACVKPDVFTYNTLMNGYLLV 565
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A MS +G + TY IL++G C+ EA + +EM ++ P T
Sbjct: 566 YEVKKAQHVFNAMS-LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
Y+ L+ GLC G+ ++EM + + D+ ++SL+ +C N
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 158/363 (43%), Gaps = 35/363 (9%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--- 209
+LN L+ LC + ALH ++ QG ++ SY L+ G+C A L
Sbjct: 65 TLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKI 124
Query: 210 ----------------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
Y +F ++ KG ++V Y TL++ C GK+
Sbjct: 125 DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKL 184
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
++A+ +L ++ K + + + C +G+ ++ AKS++ L ++ +YS
Sbjct: 185 KEALGLLNVMVLKTINPNVCTYNILVDALCKEGK-VKEAKSVLAVMLKACVKSNVITYST 243
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + + + V + M G P + Y + K VD+AL + +EM+
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF-KEMILS 302
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F P ++ +N +L + + AV ++ + G + T IL++ C G+
Sbjct: 303 RFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELK-GIQPDLFTLNILINCFCHMGQITF 360
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
VL ++L R Y P T N LI+GLC G+ +A+ + +++++Q + +++L+
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420
Query: 482 SVC 484
VC
Sbjct: 421 GVC 423
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 6/273 (2%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ +I ++G D V TL+ LC +G++++A+ +K+L +G + + +
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G D A + + R P++ Y+ + L + E + EM KG +
Sbjct: 109 CRIG-DTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISAN 167
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + G + EAL ++ MV T P V YNIL+ LC G A L
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLL-NVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 391 KKMSKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M K CV +N TY L+DG +A V M + P V +YN++I G C
Sbjct: 227 AVMLK--ACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
I + +A+ +EMI ++ P I ++ ++ S
Sbjct: 285 KIKRVDKALNLFKEMI-LSRFPPIIQFNKILDS 316
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
VL ++ +G+ P V + L G V EAL ++ + +G + V Y L+ G+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVS-YATLINGV 108
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G++ A+ +L+K+ ++ N E Y ++D LC+ EA + EM ++
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISAN 167
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TY+ LI G C +GK EA+ L M+ + P++ ++ LV ++C
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALC 214
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L K K AL +FKE +K N + Y+S++ L +S RI+ +
Sbjct: 585 PDVHTYTILINGFCKSKMVDEALNLFKEMHQK--NMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ID+M+ + + I + G L++A++LF + T +F LL +
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Query: 126 VKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K +L+ A +F L Y +V N+++ C+ + AL + +M+ GC
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDV----YIYNVMIYGHCKQGLLEEALTMLSKMEENGC 758
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
P+ ++ I++ L ++A LL M R
Sbjct: 759 IPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 44/369 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
Q+ LL D LC+ + A+ V + M G PD SY L+ LC + A L+
Sbjct: 98 FQATQLLYD-LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVD 156
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + G + Y +L+ LC G + ++Q+L+++++KGL P + + L
Sbjct: 157 KM----EEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEA 211
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--- 327
+ A L++E + +GG P+L SY+ + L EGR + ++ E+ +KGF
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271
Query: 328 ----------------W----------------PSLVMYEAKLAALFKDGMVDEALEVIE 355
W PS V Y + +L G + ALEV+E
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E M++ F PT YN ++ LC + V L +M + C N TY + LC
Sbjct: 332 E-MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYR-HCNPNEGTYNAIAT-LCE 388
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G EA +++ + + ++ E Y ++I LC G Y A L EM PD
Sbjct: 389 EGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448
Query: 476 WSSLVASVC 484
+SSL+ +C
Sbjct: 449 YSSLIRGLC 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 183/401 (45%), Gaps = 10/401 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + +++D+M+ + + + +R G L +++ L L
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q V +++ LL+ KE + A L L K + S N+L+ LC+ R+
Sbjct: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKL-LDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A+ +F+E+ +G P+ SY+IL++ LCN+ R EA LL M V
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM----DGDERSPSTVT 309
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +L G+ + A+++LE+++R K S + I C D ++ +++
Sbjct: 310 YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKD-RKVDLVVKCLDQM 368
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P+ +Y+A+A L EG + E ++ + K + + Y+ + +L + G
Sbjct: 369 MYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNT 427
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A +++ EM K F P Y+ L++GLC G A+ M + + + E Y
Sbjct: 428 YPAFQLL-YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKL--DTENYN 484
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L+ G C+ R A V E M+ + Y TY +L+ G+
Sbjct: 485 SLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 7/284 (2%)
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
RLN+A L M +KG D+ LL+ LC K++ A++++E ++ G+
Sbjct: 77 RLNDAFFHLEFMV----EKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDA 132
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C G ++ A L+++ G + A+Y+++ L G + + ++LD
Sbjct: 133 ASYTFLVSSLCRKG-NVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLD 191
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KG P+ Y L A +K+ DEA ++++E + KG P + YN+LL GLC
Sbjct: 192 RLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG-KPNLVSYNVLLTGLCKE 250
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G + A+ +++ + G N +Y IL+ LC +GR+ EA+ +L EM P T
Sbjct: 251 GRTEDAMQLFRELPSK-GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVT 309
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN+LI L G+ A+ LEEMI P S ++ ++A +C
Sbjct: 310 YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLC 353
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 192/418 (45%), Gaps = 10/418 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V++ M G + + + + R G + A+ L + ++ T ++N+L++ +
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L + L R V + + + L++ + R +D A + E+ +G P+
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAY-TYSFLLEAAYKERGADEASKLLDEIIAKGGKPN 236
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY++L+ GLC + R +A L F + KG ++V Y LL +LC++G+ ++A
Sbjct: 237 LVSYNVLLTGLCKEGRTEDAMQL----FRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L + + ++P + + I + E A ++ E + P+ +SY+ +
Sbjct: 293 VLLAE-MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIAR 351
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + ++ K LD+M + P+ Y A +A L ++GMV EA +I+ K F
Sbjct: 352 LCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHF-S 409
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
T Y I++ LC GN+ A L +M+K G + TY L+ GLC +G EA +
Sbjct: 410 TQEFYKIVITSLCRKGNTYPAFQLLYEMTK-YGFTPDSFTYSSLIRGLCMEGMLNEAIEI 468
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
M + E YN LI G C + A+ E M+ + L + + ++ LV +
Sbjct: 469 FSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 41 YRHNGPVYAS--MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
YRH P + I L E + E +I + + I + R G
Sbjct: 370 YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A L ++++ + ++++L++ + E L A +F S +K ++ N L+
Sbjct: 430 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF--SVMEENIKLDTENYNSLI 487
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
C+ RR+DLAL VF+ M +G + +Y IL++G+ +++ ++ AT +L + R
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR 544
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 44/369 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
Q+ LL D LC+ + A+ V + M G PD SY L+ LC + A L+
Sbjct: 98 FQATQLLYD-LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVD 156
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + G + Y +L+ LC G + ++Q+L+++++KGL P + + L
Sbjct: 157 KM----EEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEA 211
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--- 327
+ A L++E + +GG P+L SY+ + L EGR + ++ E+ +KGF
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271
Query: 328 ----------------W----------------PSLVMYEAKLAALFKDGMVDEALEVIE 355
W PS V Y + +L G + ALEV+E
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E M++ F PT YN ++ LC + V L +M + C N TY + LC
Sbjct: 332 E-MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYR-HCNPNEGTYNAIAT-LCE 388
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G EA +++ + + ++ E Y ++I LC G Y A L EM PD
Sbjct: 389 EGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFT 448
Query: 476 WSSLVASVC 484
+SSL+ +C
Sbjct: 449 YSSLIRGLC 457
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 183/401 (45%), Gaps = 10/401 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + +++D+M+ + + + +R G L +++ L L
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLI 194
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q V +++ LL+ KE + A L L K + S N+L+ LC+ R+
Sbjct: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKL-LDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A+ +F+E+ +G P+ SY+IL++ LCN+ R EA LL M V
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM----DGDERSPSTVT 309
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +L G+ + A+++LE+++R K S + I C D ++ +++
Sbjct: 310 YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKD-RKVDLVVKCLDQM 368
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P+ +Y+A+A L EG + E ++ + K + + Y+ + +L + G
Sbjct: 369 MYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNT 427
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A +++ EM K F P Y+ L++GLC G A+ M + + + E Y
Sbjct: 428 YPAFQLL-YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKL--DTENYN 484
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L+ G C+ R A V E M+ + Y TY +L+ G+
Sbjct: 485 SLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 7/284 (2%)
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
RLN+A L M +KG D+ LL+ LC K++ A++++E ++ G+
Sbjct: 77 RLNDAFFHLEFMV----EKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDA 132
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C G ++ A L+++ G + A+Y+++ L G + + ++LD
Sbjct: 133 ASYTFLVSSLCRKG-NVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLD 191
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KG P+ Y L A +K+ DEA ++++E + KG P + YN+LL GLC
Sbjct: 192 RLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG-KPNLVSYNVLLTGLCKE 250
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G + A+ +++ + G N +Y IL+ LC +GR+ EA+ +L EM P T
Sbjct: 251 GRTEDAMQLFRELPSK-GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVT 309
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN+LI L G+ A+ LEEMI P S ++ ++A +C
Sbjct: 310 YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLC 353
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 192/418 (45%), Gaps = 10/418 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V++ M G + + + + R G + A+ L + ++ T ++N+L++ +
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L + L R V + + + L++ + R +D A + E+ +G P+
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAY-TYSFLLEAAYKERGADEASKLLDEIIAKGGKPN 236
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY++L+ GLC + R +A L F + KG ++V Y LL +LC++G+ ++A
Sbjct: 237 LVSYNVLLTGLCKEGRTEDAMQL----FRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L + + ++P + + I + E A ++ E + P+ +SY+ +
Sbjct: 293 VLLAE-MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIAR 351
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + ++ K LD+M + P+ Y A +A L ++GMV EA +I+ K F
Sbjct: 352 LCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHF-S 409
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
T Y I++ LC GN+ A L +M+K G + TY L+ GLC +G EA +
Sbjct: 410 TQEFYKIVITSLCRKGNTYPAFQLLYEMTK-YGFTPDSFTYSSLIRGLCMEGMLNEAIEI 468
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
M + E YN LI G C + A+ E M+ + L + + ++ LV +
Sbjct: 469 FSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 41 YRHNGPVYAS--MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
YRH P + I L E + E +I + + I + R G
Sbjct: 370 YRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
A L ++++ + ++++L++ + E L A +F S +K ++ N L+
Sbjct: 430 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF--SVMEENIKLDTENYNSLI 487
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
C+ RR+DLAL VF+ M +G + +Y IL++G+ +++ ++ AT +L + R
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR 544
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 192/456 (42%), Gaps = 47/456 (10%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A +F +K R N Y ++I L E R+ E + +M+ D C +
Sbjct: 22 SAFSVFNMMPKK--GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ +G+ EA++LF + + C ++ ++ M KE+KLE +
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V S + + N L+D C+ + A + M C P+ +Y+ L+ G C + ++ A
Sbjct: 140 LVPS-VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 206 THLLYSMF-WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
LL M R++ +V Y +L+ C G + A ++L
Sbjct: 199 MALLSKMLESRLTPS-----VVTYNSLIHGQCKIGYLDSAYRLL---------------- 237
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+L+NE G +P +YS L +GRI E + + + ++
Sbjct: 238 -----------------NLMNE---NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE 277
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG + V+Y A + K G +D+A +++ M+ +P YN L+ GLC
Sbjct: 278 KGIKANEVIYTALIDGYCKAGKMDDANSLLDR-MLTEDCLPNSSTYNALIDGLCKERKVQ 336
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A++ ++ M Q G TY IL+ + ++G F A R+L++M+ Y P V Y
Sbjct: 337 EALLLMESMI-QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I C+ G EA + M + +PD ++ ++
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 189/430 (43%), Gaps = 49/430 (11%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+N + V + M C + + I G+++E +++FK + + +C ++
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+ ++ H LF E R++++NL F EM
Sbjct: 77 YTVIV------------HALF-------ESGRRMEAINL-----------------FSEM 100
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+GC P+ +Y +++ +C + +L E +L M +KG + Y L+ C
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV----EKGLVPSVPTYNALIDGYCK 156
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+G ++ A +IL+ ++ P R + +C +++ A +L+++ L PS+
Sbjct: 157 EGMVEAAQEILD-LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV 215
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEVI 354
+Y+++ G + ++L+ M G P Y + L K G ++EA +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E+ +K V +Y L+ G C AG A L +M + C+ N TY L+DGLC
Sbjct: 276 KEKGIKANEV----IYTALIDGYCKAGKMDDANSLLDRMLTE-DCLPNSSTYNALIDGLC 330
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++ + EA ++E M+ + V TY +LI + G A L++M+S PD+
Sbjct: 331 KERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVY 390
Query: 475 VWSSLVASVC 484
++++ + + C
Sbjct: 391 IYTAFIHAFC 400
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 164/346 (47%), Gaps = 8/346 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC+ R D +++F++M CYP +Y +++ L R EA +L F +
Sbjct: 45 LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINL----FSEM 100
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++G +I Y ++ A+C + K+++ +IL++++ KGL + + C +G
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGM- 159
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E A+ +++ P+ +Y+ + + + +L +M PS+V Y +
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K G +D A ++ M + VP Y++ + LC G A + + K+
Sbjct: 220 LIHGQCKIGYLDSAYRLLNL-MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL-KE 277
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G AN Y L+DG C+ G+ +A+ +L+ ML P TYN LI GLC K E
Sbjct: 278 KGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE 337
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
A++ +E MI + + ++ L+ ++ D + + L+Q+ S
Sbjct: 338 ALLLMESMIQKGLKCTVPTYTILIVAM-LKEGDFDYAHRILDQMVS 382
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 214/512 (41%), Gaps = 45/512 (8%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRIT 62
+P + T T + + + + A+ +F E +E+ PN Y MI + + ++
Sbjct: 71 YPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIH----TYTVMINAMCKETKLE 126
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E + ++D+M + I Y + G + A + + +C +++N L+
Sbjct: 127 EGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++ + A L L + + + N L+ C+ D A + M+ G
Sbjct: 187 CGFCRKKNVHRAMAL-LSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV 245
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD+ +Y + + LC R+ EA L F + +KG + VIY L+ C GK+
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIEEANVL----FNSLKEKGIKANEVIYTALIDGYCKAGKMD 301
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSA 301
DA +L+++L + S + + C + + E L+ E++I+ G+ ++ +Y+
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL--LLMESMIQKGLKCTVPTYTI 359
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + + EG ++LD+M + G+ P + +Y A + A G + EA +++ +G
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG---- 417
+P Y +++ G A LK+M GC + TY L+ L ++
Sbjct: 420 V-MPDALTYTLVIDAYGGLGLLNPAFDVLKRMF-DTGCDPSHHTYSCLIKHLLKEELTKK 477
Query: 418 -------------------------RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+F A + E+ML P + TY LI GLC +G
Sbjct: 478 YKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVG 537
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ A + M + P ++++SL+ C
Sbjct: 538 RLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 36/320 (11%)
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ LN + +S+F + +KG + V Y L+ LC+ G++ + + I +K +R+
Sbjct: 13 EANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKK-MREDDCY 71
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P R + + + + A +L +E RG P++ +Y+ M + E ++ EG ++
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE----------------------- 355
LDEM KG PS+ Y A + K+GMV+ A E+++
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCR 191
Query: 356 -----------EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+M++ P+V YN L+ G C G A L M++ G V +
Sbjct: 192 KKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN-GVVPDQW 250
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY + +D LC+ GR EA+ + + + Y LI G C GK +A L+ M
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Query: 465 ISQAKLPDISVWSSLVASVC 484
+++ LP+ S +++L+ +C
Sbjct: 311 LTEDCLPNSSTYNALIDGLC 330
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 210/498 (42%), Gaps = 45/498 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P + T T + + K+ +I E EK P+ P Y ++I + +
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSV----PTYNALIDGYCKEGMVEA 162
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+E++D M +SC + + I + R ++ A++L + + ++N+L+
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222
Query: 124 EMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
K L++A+ +L L + G V + ++ +D LC+ R + A +F + +G
Sbjct: 223 GQCKIGYLDSAYRLLNLMNENG--VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+ Y L+ G C ++++A LL M S Y L+ LC + K+Q
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS----TYNALIDGLCKERKVQ 336
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A+ ++E +++KGLK + + +G D + A ++++ + G P + Y+A
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEG-DFDYAHRILDQMVSSGYQPDVYIYTAF 395
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
G I E + ++ M +G P + Y + A G+++ A +V++ G
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455
Query: 363 FVPTVRVYNILLK--------------GLCDAGNSA---------------VAVMYLKKM 393
P+ Y+ L+K LCD+ + A+ +KM
Sbjct: 456 -DPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKM 514
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ GC N TY L+ GLC+ GR A ++ + M R P YN L+ C +G
Sbjct: 515 LEH-GCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGI 573
Query: 454 QYEAVMWLEEMISQAKLP 471
+AV + M+ LP
Sbjct: 574 YGDAVRLVGAMMEHGHLP 591
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 187/430 (43%), Gaps = 35/430 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ I L + RI E + + +K + + ++ I Y +AG++++A SL +
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C+ + ++N L+ + KE K++ A +L + S +K + + +L+ + +
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEA-LLLMESMIQKGLKCTVPTYTILIVAMLKEGD 369
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + +M G PD Y + C + EA ++ MF ++G D +
Sbjct: 370 FDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF----ERGVMPDAL 425
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG---------------LKAPKSRRHR-IDLCP 270
Y ++ A G + A +L+++ G LK +++++ + LC
Sbjct: 426 TYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCD 485
Query: 271 C------NDGEDI------EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
D D+ E A L + L G P++ +Y+ + I L GR+ K+
Sbjct: 486 SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKL 545
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D M +G PS +Y + L + G+ +A+ ++ M G +P + N+L GL
Sbjct: 546 FDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG-HLPLLESLNVLFCGLY 604
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G+ A + + Q G + + IL+DGL ++G S +L M R
Sbjct: 605 EEGSKEKAKVVFSNLL-QCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663
Query: 439 ETYNVLIRGL 448
+TY +LI GL
Sbjct: 664 QTYRMLIEGL 673
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+L N D+ A S+ N +G + SY+ + L GR+ EG + +MR
Sbjct: 10 NLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDD 69
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+P++ Y + ALF+ G EA+ + E +G P + Y +++ +C
Sbjct: 70 CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGC-EPNIHTYTVMINAMCKETKLEEG 128
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +M ++ G V + TY L+DG C++G A +L+ M S P TYN LI
Sbjct: 129 RRILDEMVEK-GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELIC 187
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C + A+ L +M+ P + ++SL+ C
Sbjct: 188 GFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
++ N++ L + NSA +V M + GC N +Y L+ GLC GR E + +
Sbjct: 7 KLGNLVEANLNNDVNSAFSVF---NMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFK 63
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M +P V TY V++ L G++ EA+ EM + P+I ++ ++ ++C T
Sbjct: 64 KMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKET 123
Query: 488 ADLNVCRKTLEQL 500
L R+ L+++
Sbjct: 124 K-LEEGRRILDEM 135
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + + K A + KE +K + N VY ++I E+ + +
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLIDSFIEAGSLNKAI 374
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL----SQFNCVNWTQSFNTL 121
E+ D M S + T I+ Y + GQ + A L K + N ++T L
Sbjct: 375 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 434
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ +S L + LR+ + L L+ LC+ + AL ++ + +G
Sbjct: 435 CSHLMFDSALRFVGEMLLRN-----MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D + + L+ GLC +L+EA + + R G D V Y TL+ C + K+
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 545
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A L++++++GLK P + + I +C + +E A ++ G +P + +YS
Sbjct: 546 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 604
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M R EG + DEM +K P+ V+Y + A + G + ALE+ E+ KG
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y L+KG+ A + ++M + G N Y L+DG + G+ ++
Sbjct: 665 -ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVK 722
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L EM ++ P TY V+I G G EA L EM + +PD + +
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 781
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F TAI + + G++ EAV LF SK+E A
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLF-------------------------SKMEEAG------ 279
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + N ++D L C R D A ++M +G P +Y IL+KGL +R
Sbjct: 280 -----VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 334
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +L M ++KG ++++Y L+ + + G + A++I + ++ KGL S
Sbjct: 335 IGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 390
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +G+ + A+ L+ E L G + S++++ L + + + E
Sbjct: 391 TYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 449
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + P + ++ L K G +ALE+ + + KG FV R N LL GLC+AG
Sbjct: 450 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAG 508
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K++ + GCV + +Y L+ G C + EA L+EM+ R P TY
Sbjct: 509 KLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++LI GL ++ K EA+ + ++ LPD+ +S ++ C
Sbjct: 568 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 610
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 27/356 (7%)
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD---LALHVFQEMDFQGCYPDRESYHILMKG 195
L C+ E++ ++ +LL++V C + D LAL VF + +G +P + + +IL+
Sbjct: 167 LSLCFDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 224
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R NE + + + KG D+ ++ T + A C GK+++A+++ K+ G
Sbjct: 225 LV---RANEFQKCCEA--FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 279
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI-------RGGIPSLASYSAMAIDLYN 308
+ AP ++ N D G +EA + RG P+L +YS + L
Sbjct: 280 V-AP-------NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 331
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
RI + VL EM KGF P++++Y + + + G +++A+E I++ MV T
Sbjct: 332 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSS 390
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+KG C G + A LK+M +G N ++ ++ LC F A R + E
Sbjct: 391 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 449
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML+R+ P LI GLC GK +A+ + +++ + D ++L+ +C
Sbjct: 450 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 505
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 14/456 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+F + +E N + ++I L R E ++M E ++
Sbjct: 268 AVKLFSKMEE--AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 325
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
++ RA ++ +A + K +++ +N L+ ++ L +A I L G
Sbjct: 326 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S + N L+ C+ ++D A + +EM G ++ S+ ++ LC+ + A
Sbjct: 386 SLTS--STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 443
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ M R G G + TL+ LC GK A+++ + L KG +
Sbjct: 444 LRFVGEMLLRNMSPGGG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 499
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A + E L RG + SY+ + + ++ E LDEM +
Sbjct: 500 LLHGLCEAGK-LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P Y + LF V+EA++ ++ G +P V Y++++ G C A +
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG-MLPDVYTYSVMIDGCCKAERTEE 617
Query: 386 AVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M SK V N Y L+ CR GR A + E+M + P TY L
Sbjct: 618 GQEFFDEMMSKNVQ--PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 675
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I+G+ I + EA + EEM + P++ +++L+
Sbjct: 676 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+EA + K + CV S+NTL+ + KL+ A +FL +K
Sbjct: 507 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNY 565
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+ L + + A+ + + G PD +Y +++ G C R E M
Sbjct: 566 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 625
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ Q + V+Y L+ A C G++ A+++ E + KG+ +P S + + +
Sbjct: 626 MSKNVQPNT----VVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMS 680
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN------------------------ 308
+E AK L E + G P++ Y+A+ ID Y
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL-IDGYGKLGQMVKVECLLREMHSKNVHPNK 739
Query: 309 ------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+G + E ++L+EMR KG P + Y+ + K G V EA + +E
Sbjct: 740 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799
Query: 357 E 357
E
Sbjct: 800 E 800
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P + ++ + A K G V+EA+++ + M + P V +N ++ GL G
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMCGRYD 301
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M+ +KM ++ G TY ILV GL R R +A VL+EM + + P V YN L
Sbjct: 302 EAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I G +A+ + M+S+ S +++L+ C N N R E LS
Sbjct: 361 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 25/449 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + R+ + EV ++M C C + ++ RAG+L EA ++ ++
Sbjct: 186 TYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDM 245
Query: 107 SQFNCVNWTQSFNTLLKEMVK--ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ N +++ ++ + K +EAA ++ G ++ + ++L++ LC+
Sbjct: 246 CRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLV--TEMMGKKIAPDFYAYSILINGLCKA 303
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
RR A +FQEM +G P +Y+ L++GL + +L +A L Y M +G D
Sbjct: 304 RRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML----DQGRLPD 359
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
Y ++ C G +A + + +++ G+ + + + E A L
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGI-VLNTWTYNFMIVGFIKDEAWSSAWMLF 418
Query: 285 NEALIRGG------IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
++ G P++ +Y + L ++ E K+L MR KGF PSL ++E L
Sbjct: 419 KR--MQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLL 476
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ L + G +D+A E+ +E M + V NILL G+ G+ A +LK+M+ G
Sbjct: 477 SRLARAGRLDDAFELYKE-MSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT-DTG 534
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK---QY 455
V + TY LV GLC G+ +A +++EE++ P + L+ LC+ G Y
Sbjct: 535 IVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAY 594
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
E WL + + L + ++LV S C
Sbjct: 595 EFYCWLPSVGVEVTL---GMHNTLVTSCC 620
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 47/407 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ I +AG L EA S K + Q +C S+N ++ K +E A + FLR
Sbjct: 12 LYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKA-LAFLRE 69
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + ++ C+ A+ VF EM +GC PD ++++L+ GL R+
Sbjct: 70 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 129
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA L SM + +G D+V Y T++ LC K+ +A+ +LE++ +
Sbjct: 130 IHEARELFRSM----NSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQ-------- 177
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
ED+ P+ +Y+ + L R+ + +V ++
Sbjct: 178 -------------EDVS---------------PTFVTYTTLIDHLCKFTRLQQAYEVFEK 209
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--D 379
M + Y L + G + EA V + M + T Y++++ GL D
Sbjct: 210 MAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSD-MCRKNVCMTDNTYSLVVLGLSKMD 268
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
GN A + + M K++ + Y IL++GLC+ R EA + +EM R P V
Sbjct: 269 GGNVEAAKLVTEMMGKKIA--PDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVV 326
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN L+ GL S K +A+ M+ Q +LPD ++ ++ C N
Sbjct: 327 TYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCAN 373
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 200/490 (40%), Gaps = 55/490 (11%)
Query: 4 RWPRLLTPTYLSQIIK-----KQKSPLTALKIFKEAKE-KYPNYRHNGPVYASMIGILSE 57
R P+ P +S I K ++ AL +E +E +P H Y+S++ +
Sbjct: 35 RMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPH---AYSSIVQSFCK 91
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+ +++ +V +M CE F + RA +++EA LF++++ C +
Sbjct: 92 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 151
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+NT++ + K KL+ A + L +V + L+D LC+ R A VF++M
Sbjct: 152 YNTMIAGLCKWKKLDEA-VFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
C +Y +L L +L EA+ + M +K Y ++ L
Sbjct: 211 AEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDM----CRKNVCMTDNTYSLVVLGLSK 266
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
DG ++E AK L+ E + + P
Sbjct: 267 M----------------------------------DGGNVEAAK-LVTEMMGKKIAPDFY 291
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+YS + L R E ++ EMR +G P++V Y L L + +A+E+
Sbjct: 292 AYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 351
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ +G +P YN++++G C G++ A + M K G V N TY ++ G +D
Sbjct: 352 LDQGR-LPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKD-GIVLNTWTYNFMIVGFIKDE 409
Query: 418 RFLEASRVLEEMLI----RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+ A + + M + P + TY +LI LC + EA L M + +P +
Sbjct: 410 AWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSL 469
Query: 474 SVWSSLVASV 483
+W L++ +
Sbjct: 470 KIWEVLLSRL 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 40/303 (13%)
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G + ++Y L+ LC G + +A L+++ + AP + I + +I
Sbjct: 3 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC--APNVVSYNIIIDGYCKARNI 60
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A + + E G P+ +YS++ G + + V EM KG P +V +
Sbjct: 61 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L+ L++ + EA E+ +G P V YN ++ GLC AV L++M KQ
Sbjct: 121 LSGLWRARKIHEARELFRSMNSRGC-KPDVVTYNTMIAGLCKWKKLDEAVFLLERM-KQE 178
Query: 398 GCVANGETYGILVDGLC-----------------------------------RDGRFLEA 422
TY L+D LC R G+ +EA
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEA 238
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSI-GKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
SRV +M ++ TY++++ GL + G EA + EM+ + PD +S L+
Sbjct: 239 SRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILIN 298
Query: 482 SVC 484
+C
Sbjct: 299 GLC 301
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G +P+ ++Y ++ L K GM+ EA ++ + P V YNI++ G C A
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKR--MPQHCAPNVVSYNIIIDGYCKAR 58
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
N A+ +L++M +++G Y +V C+ G +A V EM + P + +
Sbjct: 59 NIEKALAFLREM-EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNF 117
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
NVL+ GL K +EA M S+ PD+ +++++A +C
Sbjct: 118 NVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 160
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + + K A + KE +K + N VY ++I E+ + +
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL----SQFNCVNWTQSFNTL 121
E+ D M S + T I+ Y + GQ + A L K + N ++T L
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ +S L + LR+ + L L+ LC+ + AL ++ + +G
Sbjct: 459 CSHLMFDSALRFVGEMLLRN-----MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D + + L+ GLC +L+EA + + R G D V Y TL+ C + K+
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 569
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A L++++++GLK P + + I +C + +E A ++ G +P + +YS
Sbjct: 570 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M R EG + DEM +K P+ V+Y + A + G + ALE+ E+ KG
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y L+KG+ A + ++M + G N Y L+DG + G+ ++
Sbjct: 689 -ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVK 746
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L EM ++ P TY V+I G G EA L EM + +PD + +
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F TAI + + G++ EAV LF SK+E A
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLF-------------------------SKMEEAG------ 303
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + N ++D L C R D A ++M +G P +Y IL+KGL +R
Sbjct: 304 -----VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +L M ++KG ++++Y L+ + + G + A++I + ++ KGL S
Sbjct: 359 IGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +G+ + A+ L+ E L G + S++++ L + + + E
Sbjct: 415 TYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + P + ++ L K G +ALE+ + + KG FV R N LL GLC+AG
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAG 532
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K++ + GCV + +Y L+ G C + EA L+EM+ R P TY
Sbjct: 533 KLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++LI GL ++ K EA+ + ++ LPD+ +S ++ C
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 27/356 (7%)
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD---LALHVFQEMDFQGCYPDRESYHILMKG 195
L C+ E++ ++ +LL++V C + D LAL VF + +G +P + + +IL+
Sbjct: 191 LSLCFDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 248
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R NE + + + KG D+ ++ T + A C GK+++A+++ K+ G
Sbjct: 249 LV---RANEFQKCCEA--FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI-------RGGIPSLASYSAMAIDLYN 308
+ AP ++ N D G +EA + RG P+L +YS + L
Sbjct: 304 V-AP-------NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
RI + VL EM KGF P++++Y + + + G +++A+E I++ MV T
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSS 414
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+KG C G + A LK+M +G N ++ ++ LC F A R + E
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML+R+ P LI GLC GK +A+ + +++ + D ++L+ +C
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 14/456 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+F + +E N + ++I L R E ++M E ++
Sbjct: 292 AVKLFSKMEE--AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
++ RA ++ +A + K +++ +N L+ ++ L +A I L G
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S + N L+ C+ ++D A + +EM G ++ S+ ++ LC+ + A
Sbjct: 410 SLTS--STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ M R G G + TL+ LC GK A+++ + L KG +
Sbjct: 468 LRFVGEMLLRNMSPGGG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A + E L RG + SY+ + + ++ E LDEM +
Sbjct: 524 LLHGLCEAGK-LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P Y + LF V+EA++ ++ G +P V Y++++ G C A +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG-MLPDVYTYSVMIDGCCKAERTEE 641
Query: 386 AVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M SK V N Y L+ CR GR A + E+M + P TY L
Sbjct: 642 GQEFFDEMMSKNVQ--PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I+G+ I + EA + EEM + P++ +++L+
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+EA + K + CV S+NTL+ + KL+ A +FL +K
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNY 589
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+ L + + A+ + + G PD +Y +++ G C R E M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ Q + V+Y L+ A C G++ A+++ E + KG+ +P S + + +
Sbjct: 650 MSKNVQPNT----VVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMS 704
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN------------------------ 308
+E AK L E + G P++ Y+A+ ID Y
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL-IDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Query: 309 ------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+G + E ++L+EMR KG P + Y+ + K G V EA + +E
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Query: 357 E 357
E
Sbjct: 824 E 824
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P + ++ + A K G V+EA+++ + M + P V +N ++ GL G
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M+ +KM ++ G TY ILV GL R R +A VL+EM + + P V YN L
Sbjct: 326 EAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I G +A+ + M+S+ S +++L+ C N N R E LS
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 215/479 (44%), Gaps = 21/479 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
LTP+ L + PLTAL F+ + ++ N+ H+ + S++ +L + + V
Sbjct: 51 LTPSLLCSLFNLNPDPLTALNFFRWIR-RHHNFPHSLATHHSLLLLLVRHRTLRAAENVR 109
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+ M D+ F + ++N A + + Q S+N LL + +
Sbjct: 110 NSMIKSCTSPHDATFLLNLLR-----RMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRF 164
Query: 129 SKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
S ++ L+ + + G V + +LN +++ C+ +A F + PD
Sbjct: 165 SMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDL 224
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ G C + + A + M R + V Y L+ LC+ GK+ +A++
Sbjct: 225 FTYTSLVLGYCRNDDVERACGVFCVMPRR--------NAVSYTNLIHGLCEAGKLHEALE 276
Query: 247 ILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ G P R + + +C C G ++E A SL E RG P++ +Y+ +
Sbjct: 277 FWARMREDGC-FPTVRTYTVLVCALCESGRELE-ALSLFGEMRERGCEPNVYTYTVLIDY 334
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L EGR+ E K+L+EM KG PS+V + A + + K GM+++A+ V+ M P
Sbjct: 335 LCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVL-GLMESKKVCP 393
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
VR YN L+ G C + A+ L KM + + TY L+ GLC G ASR+
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVES-KLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+ + P T+N + LC +G+ EA LE + + + +++L+ C
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 195/446 (43%), Gaps = 61/446 (13%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR- 140
+ + + Y R + A +F + + N V++T L+ + + KL A + R
Sbjct: 226 TYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTN----LIHGLCEAGKLHEALEFWARM 281
Query: 141 ---SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
C+ +++ +L+ LC+ R AL +F EM +GC P+ +Y +L+ LC
Sbjct: 282 REDGCF-----PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLC 336
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ R++EA +L M +KG +V + L+ + C +G ++DA+ +L + K +
Sbjct: 337 KEGRMDEALKMLNEMV----EKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV- 391
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P R + +C G+ ++ A +L+N+ + P + +Y+ + L G + +
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGTFVPTVRVYNILL 374
+ M GF P + A + L + G V EA LE ++E+ VK Y L+
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN----EHAYTALI 507
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR---------------- 418
G C AG A K+M + C+ N T+ +++DGL ++G+
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAE-ECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566
Query: 419 -------------------FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
F A+ +L ++ Y P V TY I+ CS G+ EA
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626
Query: 460 WLEEMISQAKLPDISVWSSLVASVCC 485
+ ++ ++ L D +++ L+ + C
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGC 652
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 211/543 (38%), Gaps = 78/543 (14%)
Query: 31 FKEAKEKYPNYRHNG-----PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
EA E + R +G Y ++ L ES R E + +M+ CE +
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + G+++EA+ + + + FN L+ K +E A + L
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA-VGVLGLMESK 389
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V +++ N L+ C+ + D A+ + +M PD +Y+ L+ GLC ++ A
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ L F + + G D + + LC G++ +A QILE + K +KA +
Sbjct: 450 SRL----FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG---------- 315
+ C G+ IE A SL L +P+ +++ M L EG++ +
Sbjct: 506 LIDGYCKAGK-IEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564
Query: 316 -------------------------DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
+++L+ + + G+ P++V Y A + A G ++EA
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E++ + +G + + +YN+L+ G A L++M GC + TY IL+
Sbjct: 625 EEMVIKIKNEGVLLDSF-IYNLLINAYGCMGLLDSAFGVLRRMFG-TGCEPSYLTYSILM 682
Query: 411 DGLCRDGRFLEASR-----------------------------VLEEMLIRSYWPCVETY 441
L + E S + E+M P + TY
Sbjct: 683 KHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTY 742
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ LI GLC +G+ A M P + +SL++S CC L+ +
Sbjct: 743 SKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS-CCKLGMFGEAVTLLDSMM 801
Query: 502 SCS 504
CS
Sbjct: 802 ECS 804
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 175/412 (42%), Gaps = 26/412 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ + + L R+ E ++++ +K + + + I Y +AG++ A SLFK +
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ + +FN ++ + KE K++ A +L + ++VK + + N+L++ + +
Sbjct: 527 LAEECLPNSITFNVMIDGLRKEGKVQDA-MLLVEDMAKFDVKPTLHTYNILVEEVLKEYD 585
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + + G P+ +Y +K C+ RL EA M +I +G D
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE----EMVIKIKNEGVLLDSF 641
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
IY L+ A G + A +L ++ G + P + I + K L+ E
Sbjct: 642 IYNLLINAYGCMGLLDSAFGVLRRMFGTGCE-PSYLTYSILM------------KHLVIE 688
Query: 287 ALIR-GGIP-----SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ G P SL + S D++++ + ++M G P+L Y +
Sbjct: 689 KHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLING 748
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G ++ A + M +G P+ ++N LL C G AV L M + +
Sbjct: 749 LCKVGRLNVAFSLYHH-MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM-MECSHL 806
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
A+ E+Y +L+ GL +A V +L Y + VLI GL G
Sbjct: 807 AHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTG 858
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 210/477 (44%), Gaps = 34/477 (7%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
+L P + ++I + P TA ++F+ A K + HN +++ + ++ R+ +
Sbjct: 66 ILVPDLVGKVIHRIPDPNTAWEVFQWAG-KQSKFTHNRFTCNNLLSVYVKARRVEDAHLF 124
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ E + + T + + +AG + +A++LF + + + +S N +L+ +
Sbjct: 125 FQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKD-SGIAVLRSHNIVLRGLCS 183
Query: 128 ESKLEAAHILFLRSCYGWEV--------KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
K+ A WEV + S +++D LC+ R+ D A+ +F++M
Sbjct: 184 GGKISMA----------WEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD 233
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ YPD +Y L+ GL RR+ EA Y +F KG +V Y T++ LC G
Sbjct: 234 KAIYPDVVTYGALIDGLGKQRRVKEA----YDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+I++A+ + + ++R+ P + + N E A L E L G P + +Y
Sbjct: 290 RIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTY 349
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFW----PSLVMYEAKLAALFKDGMVDEALEVIE 355
+ + L G DK ++ R G P+++ Y + K + +A++ +
Sbjct: 350 NTLLDGLCKSGC---EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVK-LA 405
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+EM + +P + +++ LC A + + K C + + ++ G C+
Sbjct: 406 KEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT--CKPDSVLFNTMLAGYCK 463
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R +A ++ + ML P + TY L+ G C G+ +A++ EMI P+
Sbjct: 464 ITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 17/370 (4%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N LL VK ++E AH LF +S + S N LM+ + AL +F EM
Sbjct: 106 NNLLSVYVKARRVEDAH-LFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG---EDIVIYRTLLFAL 235
G R S++I+++GLC+ ++ SM W + + SG +++ Y ++ L
Sbjct: 165 DSGIAVLR-SHNIVLRGLCSGGKI--------SMAWEVFKDMSGIFSPNLISYTIMIDGL 215
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C K+ A+ + ++++ K + P + + ++ A L EA +G P+
Sbjct: 216 CKSRKVDKAITLFKQMVDKAI-YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ M L GRI + D+M R P + Y A + L ++A E+
Sbjct: 275 VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELY 334
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EE + G P V YN LL GLC +G A+ +KM C N TY +L+D C
Sbjct: 335 EEMLDTGC-SPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFC 393
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R +A ++ +EM RS P T+ +I+ LC + EA L E I + PD
Sbjct: 394 KVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA-HELFESIGKTCKPDSV 452
Query: 475 VWSSLVASVC 484
++++++A C
Sbjct: 453 LFNTMLAGYC 462
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 132/328 (40%), Gaps = 48/328 (14%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRIT 62
+P ++T L + KQ+ A +F+EA+ K +P Y +MI L + RI
Sbjct: 237 YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV----TYNTMIDGLCKCGRIE 292
Query: 63 EMKEVIDQMKGDSCECKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+ D M + D ++ I + + +A L++ + C ++NTL
Sbjct: 293 NALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTL 352
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L + K + A +F + G + + +L+D C+ R A+ + +EM+ +
Sbjct: 353 LDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRS 412
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
PD ++ +++ LC + R++EA L S+ K D V++ T+L C +I
Sbjct: 413 LLPDAVTFTTVIQKLCKESRIDEAHELFESI-----GKTCKPDSVLFNTMLAGYCKITRI 467
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA ++ +++L G P+LA+Y+A
Sbjct: 468 DDAKKLHDRMLDSGCA------------------------------------PTLATYTA 491
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ GR + + EM GF P
Sbjct: 492 LVTGFCRTGRYSDALIMYHEMIEMGFPP 519
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 204/491 (41%), Gaps = 83/491 (16%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++P+ + +++K+ + + AL F A EK +++N Y ++I L + + ++ +
Sbjct: 121 VSPSLVVEVLKRLSNAGVIALSFFTWA-EKQKGFKYNTESYNALIEALGKIKQFKLIRSL 179
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+++MK KD+ FA R +ARA ++ EA+ F+ + +F T FN LL
Sbjct: 180 VNEMKSRKLLNKDT-FALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLL----- 233
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
D LC+ R + A VF +M + PD +
Sbjct: 234 -------------------------------DTLCKSRHVEKANKVFDKMKKRRFVPDIK 262
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
SY IL++G + L L ++ + G D+V Y L+ A C K A+++
Sbjct: 263 SYTILLEGWGKEHNLLR----LDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIEL 318
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++ K K P+ Y + L
Sbjct: 319 FHEMEAKNCK------------------------------------PTPHVYCTLINGLG 342
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+E R+ E + + ++ GF P Y + + A +D+A +VI+E M K + P
Sbjct: 343 SEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDE-MRKHSAGPNS 401
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
R Y+I+L L A + A +KMS + GC TY I+V C + R A +V +
Sbjct: 402 RTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWD 461
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--- 484
+M + P + Y+ LI LC K EA + +EM+ P ++S+L ++
Sbjct: 462 QMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEG 521
Query: 485 CNTADLNVCRK 495
N LN+ RK
Sbjct: 522 KNDEALNLARK 532
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 5/264 (1%)
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
K+++A++ E++ G K S +R+ C +E A + ++ R +P + SY
Sbjct: 206 KVEEAIEAFERMEEFGFKLETSDFNRLLDTLCK-SRHVEKANKVFDKMKKRRFVPDIKSY 264
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + E ++ D+V EM+ GF P +V Y ++A K D A+E+ E
Sbjct: 265 TILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEA 324
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K PT VY L+ GL + A+ + ++ K G TY LV C R
Sbjct: 325 KNC-KPTPHVYCTLINGLGSEKRLSEALEFFERF-KSCGFTPEAPTYNSLVGAYCWSMRI 382
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSS 478
+A +V++EM S P TY++++ L + EA ++M ++ P +S +
Sbjct: 383 DDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTY-E 441
Query: 479 LVASVCCNTADLNVCRKTLEQLSS 502
++ + CN +++ ++ +Q+ +
Sbjct: 442 IIVRMFCNEDRVDLAKQVWDQMKA 465
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L K K A+++F E + K N + VY ++I L R++E
Sbjct: 294 PDVVTYGILISAYCKAKKYDAAIELFHEMEAK--NCKPTPHVYCTLINGLGSEKRLSEAL 351
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E ++ K + + + + Y + ++++A + + + + +++++ +L +
Sbjct: 352 EFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHL 411
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+K + A+ F + + + + +++ + C R DLA V+ +M +G P
Sbjct: 412 IKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPG 471
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y L+ LC+ +L EA M G ++ L AL D+GK +A+
Sbjct: 472 MHMYSDLITSLCHKNKLGEACKYFQEML----DAGIRPPAKMFSNLKQALLDEGKNDEAL 527
Query: 246 QILEKI 251
+ KI
Sbjct: 528 NLARKI 533
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R+++ G D+ Y LL LCD+ + Q+A+++L +
Sbjct: 147 MDIV---LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM-------------- 189
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+D G G P + SY+ + + EG + EM +
Sbjct: 190 --------ADDRGG-----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + +AAL K +D+A+EV+ MVK +P YN +L G C +G
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ LKKM + G N TY L++ LC++GR EA ++ + M R P + TY L+
Sbjct: 290 AIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G + G E L+ M+ PD V++ L+
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 183/420 (43%), Gaps = 44/420 (10%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMD 159
+ + +++ C+ S+N LLK + E++ + A L + G + S N +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ SD A + EM +G PD +Y ++ LC + +++A +L +M +
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV----KN 265
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D + Y ++L C G+ ++A+ L+K+ G++ + C +G E
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE- 324
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD------------------- 320
A+ + + RG P +A+Y + +G +VE +LD
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384
Query: 321 ----------------EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+MR G P++V Y + L K G VD+A+ + E+M+
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEGLT 443
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + VY L+ GLC A + +M + C+ N + ++D C++GR +E+ +
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIESEK 502
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + M+ P + TYN LI G C GK EA L M+S PDI + +L+ C
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 154/329 (46%), Gaps = 5/329 (1%)
Query: 157 LMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC +R+ A+ V + M GC PD SY+ L+KGLC++ R EA LL+ M
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH-MMAD 191
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
GS D+V Y T+L +G A ++L +G+ I C +
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK-AQ 250
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A ++N + G +P +Y+++ + G+ E L +MR+ G P++V Y
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + L K+G EA ++ + M K P + Y LL+G G + V + L +
Sbjct: 311 SLMNYLCKNGRSTEARKIF-DSMTKRGLEPDIATYRTLLQGYATKG-ALVEMHALLDLMV 368
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + + IL+ + + +A V +M P V Y +I LC G
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+++ E+MI + P+I V++SL+ +C
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 196/433 (45%), Gaps = 11/433 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGD--SCECKDSV-FATAIRTYARAGQLNEAVSLFK 104
Y +++ L + NR E E++ M D D V + T + + + G ++A S +
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++++++ + K ++ A + L + V + N ++ C
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKA-MEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ A+ ++M G P+ +Y LM LC + R EA + SM +++G D
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM----TKRGLEPD 340
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
I YRTLL +G + + +L+ ++R G++ P I +C E ++ A +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQ-PDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ G P++ Y + L G + + ++M +G P++++Y + + L
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D+A E+I E + +G + T+ +N ++ C G + L + ++G +
Sbjct: 460 DKWDKAEELILEMLDRGICLNTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDII 517
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+DG C G+ EA+++L M+ P + TY LI G C + + +A+ +EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 465 ISQAKLPDISVWS 477
+S P+I ++
Sbjct: 578 VSSGVSPNIITYN 590
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 188/438 (42%), Gaps = 57/438 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S++ L ++ R TE +++ D M E + + T ++ YA G L E +L +
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------LLMD 159
+ FN L+ K+ K++ A ++F K R LN ++D
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVF--------SKMRQHGLNPNVVCYGTVID 419
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
VLC+ D A+ F++M +G P+ Y L+ GLC + ++A L+ M R
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR---- 475
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + + + +++ + C +G++ ++ ++ + ++R G+K
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK---------------------- 513
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
P + +Y+ + G++ E K+L M + G P +V Y +
Sbjct: 514 --------------PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+ +D+AL + +E MV P + YNI+L+GL +A A ++K G
Sbjct: 560 GYCRVSRMDDALALFKE-MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS-GT 617
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
TY I++ GLC++ EA R+ + + + T+N++I L G+ EA
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677
Query: 460 WLEEMISQAKLPDISVWS 477
+ +PD+ +S
Sbjct: 678 LFAAHSANGLVPDVRTYS 695
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + GR+ G L + KGF + + L L D +A+++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVD 411
+ M + +P V YN LLKGLCD S A+ L M+ G + + +Y +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G ++G +A EML R P V TY+ +I LC +A+ L M+ +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 472 DISVWSSLVASVC 484
D ++S++ C
Sbjct: 270 DCMTYNSILHGYC 282
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 40/163 (24%)
Query: 361 GTFVPTVRVYNI-----------------------------------LLKGLC-DAGNSA 384
G PTV Y I LLKGLC D S
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR---SYWPCVETY 441
+ L++M+ ++GC+ + +Y L+ GLC + R EA +L M P V +Y
Sbjct: 146 AMDIVLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N ++ G G +A EM+ + LPD+ +SS++A++C
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC 247
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 40/198 (20%)
Query: 82 VFATAIRTYARAGQLNEAVSLFK---------NLSQFNCV-------------------- 112
+ T I Y R ++++A++LFK N+ +N +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 113 --NWTQ----SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ TQ ++N +L + K + + A +F C +++ ++ N+++ L +C R
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKCGR 671
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F G PD +Y ++ + L L E L +F + + G D
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE----LDDLFLSMEENGCSADSR 727
Query: 227 IYRTLLFALCDQGKIQDA 244
+ +++ L +G I A
Sbjct: 728 MLNSIVRKLLQRGDITRA 745
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + + K A + KE +K + N VY ++I E+ + +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL----SQFNCVNWTQSFNTL 121
E+ D M S + T I+ Y + GQ + A L K + N ++T L
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ +S L + LR+ + L L+ LC+ + AL ++ + +G
Sbjct: 446 CSHLMFDSALRFVGEMLLRN-----MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D + + L+ GLC +L+EA + + R G D V Y TL+ C + K+
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 556
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A L++++++GLK P + + I +C + +E A ++ G +P + +YS
Sbjct: 557 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M R EG + DEM +K P+ V+Y + A + G + ALE+ E+ KG
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y L+KG+ A + ++M + G N Y L+DG + G+ ++
Sbjct: 676 -ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVK 733
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L EM ++ P TY V+I G G EA L EM + +PD + +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F TAI + + G++ EAV LF SK+E A
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLF-------------------------SKMEEAG------ 290
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + N ++D L C R D A ++M +G P +Y IL+KGL +R
Sbjct: 291 -----VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +L M ++KG ++++Y L+ + + G + A++I + ++ KGL S
Sbjct: 346 IGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +G+ + A+ L+ E L G + S++++ L + + + E
Sbjct: 402 TYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + P + ++ L K G +ALE+ + + KG FV R N LL GLC+AG
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAG 519
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K++ + GCV + +Y L+ G C + EA L+EM+ R P TY
Sbjct: 520 KLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++LI GL ++ K EA+ + ++ LPD+ +S ++ C
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 27/356 (7%)
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD---LALHVFQEMDFQGCYPDRESYHILMKG 195
L C+ E++ ++ +LL++V C + D LAL VF + +G +P + + +IL+
Sbjct: 178 LSLCFDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 235
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R NE + + + KG D+ ++ T + A C GK+++A+++ K+ G
Sbjct: 236 LV---RANEFQKCCEA--FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI-------RGGIPSLASYSAMAIDLYN 308
+ AP ++ N D G +EA + RG P+L +YS + L
Sbjct: 291 V-AP-------NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
RI + VL EM KGF P++++Y + + + G +++A+E I++ MV T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSS 401
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+KG C G + A LK+M +G N ++ ++ LC F A R + E
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML+R+ P LI GLC GK +A+ + +++ + D ++L+ +C
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 14/456 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+F + +E N + ++I L R E ++M E ++
Sbjct: 279 AVKLFSKMEE--AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
++ RA ++ +A + K +++ +N L+ ++ L +A I L G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S + N L+ C+ ++D A + +EM G ++ S+ ++ LC+ + A
Sbjct: 397 SLTS--STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ M R G G + TL+ LC GK A+++ + L KG +
Sbjct: 455 LRFVGEMLLRNMSPGGG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A + E L RG + SY+ + + ++ E LDEM +
Sbjct: 511 LLHGLCEAGK-LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P Y + LF V+EA++ ++ G +P V Y++++ G C A +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG-MLPDVYTYSVMIDGCCKAERTEE 628
Query: 386 AVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M SK V N Y L+ CR GR A + E+M + P TY L
Sbjct: 629 GQEFFDEMMSKNVQ--PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I+G+ I + EA + EEM + P++ +++L+
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+EA + K + CV S+NTL+ + KL+ A +FL +K
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNY 576
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+ L + + A+ + + G PD +Y +++ G C R E M
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ Q + V+Y L+ A C G++ A+++ E + KG+ +P S + + +
Sbjct: 637 MSKNVQPNT----VVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMS 691
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN------------------------ 308
+E AK L E + G P++ Y+A+ ID Y
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL-IDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 309 ------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+G + E ++L+EMR KG P + Y+ + K G V EA + +E
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 357 E 357
E
Sbjct: 811 E 811
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P + ++ + A K G V+EA+++ + M + P V +N ++ GL G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M+ +KM ++ G TY ILV GL R R +A VL+EM + + P V YN L
Sbjct: 313 EAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I G +A+ + M+S+ S +++L+ C N N R E LS
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 190/399 (47%), Gaps = 11/399 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+++++ + AV+ F + T FN +L +VK + LF + +
Sbjct: 31 QSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLF-KQFEPNGI 89
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ +L++L++ C LA VF + +G +PD + + L+KGLC + + +
Sbjct: 90 TPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLY 149
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
++ +G D V Y TL+ LC G+ + ++L K+ +K + I
Sbjct: 150 F----HDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTII 205
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C + + + A + +E +++G P + +Y+ + G++ E +L+EM+ K
Sbjct: 206 NSLCKN-KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNI 264
Query: 328 WPSLVMYEAKLAALFKDG---MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
P + + + AL K+G MVDEA+ + EE M +P + YN L+ GLC +
Sbjct: 265 NPDVYTFSVLIDALGKEGKKKMVDEAMSLFEE-MKHKNMIPDIVTYNSLIDGLCKNHHLE 323
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ LK+M K+ G + +Y IL+DGLC+ GR A + +L++ V YNV+
Sbjct: 324 RAIALLKEM-KEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVM 382
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
I GLC G EA+ +M + +P+ + +++ ++
Sbjct: 383 INGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICAL 421
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 111/279 (39%), Gaps = 41/279 (14%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+F + G D+ L+ C Q I A + IL++G + +
Sbjct: 79 SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGL 138
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C GE I+ ++ + +G SY + L G ++L ++ P
Sbjct: 139 CFRGE-IKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPD 197
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+VMY + +L K+ ++ +A +V E +VKG V
Sbjct: 198 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV----------------------- 234
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
TY L+ G C G+ EA +L EM +++ P V T++VLI L
Sbjct: 235 --------------TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGK 280
Query: 451 IGKQY---EAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GK+ EA+ EEM + +PDI ++SL+ +C N
Sbjct: 281 EGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 319
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 8/213 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ---LNEAVSLF 103
Y ++I ++ E ++++MK + F+ I + G+ ++EA+SLF
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + N + ++N+L+ + K LE A I L+ ++ + S +L+D LC+
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERA-IALLKEMKEHGIQPDVYSYTILLDGLCK 353
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R ++A FQ + +GC+ + Y++++ GLC EA L M KG
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKM----EGKGCMP 409
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ + +RT++ AL ++ + A +IL +++ +GL
Sbjct: 410 NAITFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 122/296 (41%), Gaps = 9/296 (3%)
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
DQ+ + + T I +AG+ L + L + +NT++ + K
Sbjct: 152 DQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 211
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
L A ++ + + + L+ C + A + EM + PD +
Sbjct: 212 KLLGDACDVYSEMIVKG-ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYT 270
Query: 189 YHILMKGLCND---RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +L+ L + + ++EA S+F + K DIV Y +L+ LC ++ A+
Sbjct: 271 FSVLIDALGKEGKKKMVDEAM----SLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 326
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L+++ G++ P + I L G +E AK L++G ++ Y+ M
Sbjct: 327 ALLKEMKEHGIQ-PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMING 385
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
L G E + +M KG P+ + + + AL + D+A +++ E + +G
Sbjct: 386 LCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P ++ L++L K+ + + ++ G P + +IL+ C + +A
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNG-ITPDLCTLSILINCFCHQAHITLAFS 114
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ K+ G + T L+ GLC G + ++++ + + +Y LI GL
Sbjct: 115 VFANILKR-GFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGL 173
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C G+ L ++ + PD+ ++++++ S+C N
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 211
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 189/426 (44%), Gaps = 15/426 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF I Y + G +EAVS F + V N LL +++K +KLE LF R
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLE----LFWRF 223
Query: 142 CYGW---EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
G V + + L++ + + + EM+ +GC P +Y++++ GLC
Sbjct: 224 YNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCR 283
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
++EA L M +KG D+ Y L+ Q + +A +LE++ KGLK
Sbjct: 284 AGEVDEAFELKKLM----DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKP 339
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ G+ E A + E L RG +L +Y+A+ + G + + D +
Sbjct: 340 GHVAYTALIDGFMRQGDSGE-AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADAL 398
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+EM G P Y + K+ +++ EM K VPT +++ GLC
Sbjct: 399 LNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL-SEMKKSNLVPTAYTCGMIINGLC 457
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G+ A + M +G N Y L+ G ++GRF EA R+L+ M + P V
Sbjct: 458 RHGSIEDASRVFEIMV-SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
YN +I GLC K EA +L EMI + P++ + +L+ C + ++ V + +
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGY-CKSGEMQVADRYFK 575
Query: 499 QLSSCS 504
++ C
Sbjct: 576 EMLGCG 581
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 190/447 (42%), Gaps = 12/447 (2%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N H+ Y +I + E K ++ +M+ C + I RAG+++EA
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
L K + + V +++ L+ K+ + A L L + +K + L+D
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK-LMLEEMFSKGLKPGHVAYTALID 349
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ S A V +EM +G + +Y+ L+KG+C + +A LL M
Sbjct: 350 GFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV---- 405
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D Y ++ + +L ++ + L I C G IE
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS-IED 464
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A + + G P+ Y+ + EGR E ++L M KG P ++ Y + +
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K ++EA + + E M++ P V Y L+ G C +G VA Y K+M +GC
Sbjct: 525 GLCKSRKMEEAKDYLVE-MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM---LGC 580
Query: 400 --VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
N L+DG C++G EA+ + ML RS P V TY+ LI GL GK A
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ L E + + +PD+ ++S+++ C
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFC 667
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 185/403 (45%), Gaps = 13/403 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ T I+ + + G+ EAV + K + + +N+++ + K K+E A +L
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD-YLVE 541
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K + + L+ C+ +A F+EM G P+ L+ G C +
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EAT + M R D+ Y L+ L GK+Q AM++L + L KGL
Sbjct: 602 TTEATSIFRCMLGRSVH----PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I C G G ++E + + GI P++ +Y+A+ L G I ++ D
Sbjct: 658 TYNSIISGFCKQGGI--GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFD 715
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ KG + V Y + K G + +A + +E +KG P VY+ L+ G
Sbjct: 716 GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV-PPDSFVYSALIDGCRKE 774
Query: 381 GNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
GN+ A+ ++L+ + K A+ + L+DG C+ G+ +EA+++LE+M+ + P
Sbjct: 775 GNTEKALSLFLESVQKGF---ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
TY +LI C G EA + +M + +P+ +++L++
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 190/441 (43%), Gaps = 13/441 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y ++I + R E ++ M + + + I ++ ++ EA
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + ++ L+ K +++ A F + G + L+D
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF-KEMLGCGIAPNDVVCTALIDGY 596
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A +F+ M + +PD +Y L+ GL + +L A LL +KG
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL----EKGL 652
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+ Y +++ C QG I A Q+ E + +KG+ + + C GE IE A+
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE-IERAR 711
Query: 282 SLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L + +G + +Y+ + ID Y G + + ++ DEM KG P +Y A +
Sbjct: 712 ELFDGIPGKGLAHNAVTYATI-IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGC 399
K+G ++AL + E + KG F T + N L+ G C +G A L+ M K V
Sbjct: 771 CRKEGNTEKALSLFLESVQKG-FASTSSL-NALMDGFCKSGKVIEANQLLEDMVDKHVK- 827
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY IL+D C+ G EA + +M R+ P TY L+ G G++ E
Sbjct: 828 -PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886
Query: 460 WLEEMISQAKLPDISVWSSLV 480
+EMI++ PD WS ++
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMI 907
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 183/473 (38%), Gaps = 79/473 (16%)
Query: 47 VYASMI-GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y +MI G L E N + +K+++ +MK + I R G + +A +F+
Sbjct: 413 TYNNMIEGYLKEQN-TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEI 471
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + TL+K V+E + + A
Sbjct: 472 MVSLGVKPNAVIYTTLIKGHVQEGRFQEA------------------------------- 500
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ + + MD +G PD Y+ ++ GLC R++ EA L M R G ++
Sbjct: 501 -----VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER----GLKPNV 551
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ C G++Q A + +++L G+ + C +G E A S+
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE-ATSIFR 610
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
L R P + +YSA+ L G++ ++L E KG P + Y + ++ K G
Sbjct: 611 CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A + + E M + P + YN L+ GLC AG A + + G N T
Sbjct: 671 GIGKAFQ-LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK-GLAHNAVT 728
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWP----------------------------- 436
Y ++DG C+ G +A R+ +EM ++ P
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788
Query: 437 -----CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ N L+ G C GK EA LE+M+ + PD ++ L+ C
Sbjct: 789 QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHC 841
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 192/474 (40%), Gaps = 44/474 (9%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++I +S + +M G D V I Y + G EA S
Sbjct: 548 KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATS 607
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F+ + + ++++ L+ +++ KL+ A L L + + + N ++
Sbjct: 608 IFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL-LSEFLEKGLVPDVFTYNSIISGF 666
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ A + + M +G P+ +Y+ L+ GLC + A L F I KG
Sbjct: 667 CKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAREL----FDGIPGKGL 722
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ V Y T++ C G + A ++ +++ KG+ P S + + C + E A
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV-PPDSFVYSALIDGCRKEGNTEKAL 781
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL E+ ++ G S +S +A+ G+++E +++L++M K P V Y +
Sbjct: 782 SLFLES-VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYH 840
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG------------------------- 376
K G + EA E +M K +P Y LL G
Sbjct: 841 CKTGFLKEA-EQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Query: 377 ------LCDA----GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ DA G+ + + M K+ G V+ + +L+D LCR E +VL
Sbjct: 900 GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCH-VLIDPLCRKEHVSEVLKVL 958
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E++ + + T + L+R GK A L+ M+ +PD + + L+
Sbjct: 959 EKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 154/354 (43%), Gaps = 10/354 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ I +E+ D + G +AT I Y ++G L++A LF +
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLCQCR 165
+ + ++ L+ KE E A LFL S G+ S SLN LMD C+
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS---SLNALMDGFCKSG 809
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A + ++M + PD +Y IL+ C L EA M ++ +
Sbjct: 810 KVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM----QKRNLMPNA 865
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ Y LL G+ + + ++++ K ++ + +G+ ++ K L++
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLK-LVD 924
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L +GG S + L + + E KVL+++ +G SL + K G
Sbjct: 925 DMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAG 984
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+D A V++ MV+ +VP N L+ D+ +S A +LK+M+ +V C
Sbjct: 985 KMDGAARVLKS-MVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWEVAC 1037
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 171/349 (48%), Gaps = 11/349 (3%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ +L++ C A+ + EM +GC PD +Y++L+ G+C + RL+EA L SM
Sbjct: 18 TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSM 77
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
GS +++ + +L ++C G+ DA ++L +++RKG + + C
Sbjct: 78 ----PSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G + A ++ + G P+ SY+ + E ++ + L+ M ++G +P +V
Sbjct: 134 KGL-LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L AL KDG VD A+E++ + KG P + YN ++ GL G + AV L +
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGC-SPVLITYNTVIDGLSKVGKTDQAVELLHE 251
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + G + TY L+ GL R+G+ EA + ++ P TYN ++ GLC
Sbjct: 252 MRGK-GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQ 310
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ A+ +L MIS+ P ++ L+ + A+ + ++ LE L+
Sbjct: 311 QTDRAIDFLAYMISKGCKPTEVSYTILIEGI----ANEGLAKEALELLN 355
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 10/382 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV+D+ C + I + +A+ L + C ++N L+ M
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE +L+ A I FL S + + + + N+++ +C R A + EM +GC P
Sbjct: 62 CKEGRLDEA-IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+++IL+ LC L A +L M G + + Y LL C + K+ A+
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKM----PTHGCTPNSLSYNPLLHGFCKEKKMDRAI 176
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
Q LE ++ +G + + C DG+ ++ A L+N+ +G P L +Y+ +
Sbjct: 177 QYLEIMVSRGCYPDIVTYNTMLTALCKDGK-VDAAVELLNQLSSKGCSPVLITYNTVIDG 235
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV- 364
L G+ + ++L EMR KG P ++ Y + +A L ++G V+EA++ + V+G V
Sbjct: 236 LSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD--VEGFGVK 293
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P YN ++ GLC A + A+ +L M + GC +Y IL++G+ +G EA
Sbjct: 294 PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISK-GCKPTEVSYTILIEGIANEGLAKEALE 352
Query: 425 VLEEMLIRSYWPCVETYNVLIR 446
+L E+ R V++R
Sbjct: 353 LLNELCSRGVVKKSSAEQVVVR 374
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
CYPD +Y IL++ C + + +A LL M R G D+V Y L+ +C +G++
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSR----GCKPDVVTYNVLVNGMCKEGRL 67
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+A++ L + G P H I L C+ G ++ A+ L+ E + +G PS+ +++
Sbjct: 68 DEAIKFLNSMPSYG-SQPNVITHNIILRSMCSTGRWMD-AEKLLTEMVRKGCSPSVVTFN 125
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L +G + +L++M T G P+ + Y L K+ +D A++ +E + +
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G + P + YN +L LC G AV L ++S + GC TY ++DGL + G+
Sbjct: 186 GCY-PDIVTYNTMLTALCKDGKVDAAVELLNQLSSK-GCSPVLITYNTVIDGLSKVGKTD 243
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A +L EM + P V TY+ LI GL GK EA+ + ++ P+ ++S++
Sbjct: 244 QAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIM 303
Query: 481 ASVC 484
+C
Sbjct: 304 FGLC 307
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 7/321 (2%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + + N+L++ +C+ R D A+ M G P+ +++I+++ +C+ R +A
Sbjct: 48 KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEK 107
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL M +KG +V + L+ LC +G + A+ ILEK+ G P S +
Sbjct: 108 LLTEMV----RKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGC-TPNSLSYNPL 162
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L + ++ A + + RG P + +Y+ M L +G++ ++L+++ +KG
Sbjct: 163 LHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P L+ Y + L K G D+A+E++ E KG P V Y+ L+ GL G A+
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG-LKPDVITYSSLIAGLSREGKVEEAI 281
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ + + G N TY ++ GLC+ + A L M+ + P +Y +LI G
Sbjct: 282 KFFHDV-EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Query: 448 LCSIGKQYEAVMWLEEMISQA 468
+ + G EA+ L E+ S+
Sbjct: 341 IANEGLAKEALELLNELCSRG 361
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 3/209 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + +Y+ + E + + K+LDEM ++G P +V Y + + K+G +DEA++
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ G+ P V +NI+L+ +C G A L +M ++ GC + T+ IL++ L
Sbjct: 74 LNSMPSYGS-QPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK-GCSPSVVTFNILINFL 131
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
CR G A +LE+M P +YN L+ G C K A+ +LE M+S+ PDI
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+++++ ++ C ++ + L QLSS
Sbjct: 192 VTYNTMLTAL-CKDGKVDAAVELLNQLSS 219
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+EV++ ++ K + P V Y IL++ C A+ L +M + GC + TY +LV
Sbjct: 1 MEVLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSR-GCKPDVVTYNVLV 58
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+G+C++GR EA + L M P V T+N+++R +CS G+ +A L EM+ +
Sbjct: 59 NGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCS 118
Query: 471 PDISVWSSLVASVC 484
P + ++ L+ +C
Sbjct: 119 PSVVTFNILINFLC 132
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 192/440 (43%), Gaps = 47/440 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
Y ++ L + NR E E++ M D +C V ++T I + + G L++ S
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS---- 109
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
++N +L + + + + N ++ LC+ +
Sbjct: 110 -----------TYNEMLDQ---------------------RISPNVVTYNSIIAALCKAQ 137
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D A+ V M G PD +Y+ ++ G C+ + EA L M G D+
Sbjct: 138 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM----RSDGVEPDV 193
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y +L+ LC G+ +A +I + + ++GLK + + G +E L
Sbjct: 194 VTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL-- 251
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ ++R GI P+ +S + + ++ E V +MR +G P+ V Y A + L K
Sbjct: 252 DLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 311
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V++A+ + E+M+ P VYN L+ GLC A + +M + C+ N
Sbjct: 312 GRVEDAM-LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTI 369
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ ++D C++GR +E+ ++ + M+ P + TY+ LI G C GK EA L M
Sbjct: 370 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429
Query: 465 ISQAKLPDISVWSSLVASVC 484
+S PD +S+L+ C
Sbjct: 430 VSVGMKPDCVTYSTLINGYC 449
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 9/334 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQG--CYPDRESYHILMKGLCNDRRLNEATHLLY 210
S N+L++ LC RS AL + M G C PD SY ++ G + L++ Y
Sbjct: 53 SYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT----Y 108
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S + + + ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ G+ E A + + G P + +Y+++ L GR E K+ D M +G P
Sbjct: 169 CSSGQPKE-AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L G + E + + + MV+ P V++IL+ A++
Sbjct: 228 ITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM +Q G N TYG ++ LC+ GR +A E+M+ P YN LI GLC+
Sbjct: 287 SKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K A + EM+ + + ++S++ S C
Sbjct: 346 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 379
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 6/243 (2%)
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG--IPSLASY 299
+DA + +++LR+G+ P + I L D + A L++ GG P + SY
Sbjct: 34 EDARHVFDELLRRGI--PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + + EG + + +EM + P++V Y + +AAL K VD+A+EV+ MV
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL-TTMV 150
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
K +P YN ++ G C +G A+++LKKM + G + TY L+D LC++GR
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRC 209
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA ++ + M R P + TY L++G + G E L+ M+ P+ V+S L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269
Query: 480 VAS 482
V +
Sbjct: 270 VCA 272
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 176/409 (43%), Gaps = 14/409 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y S+I L ++ + + EV+ M + + + + +GQ EA+
Sbjct: 122 NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 181
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + ++N+L+ + K + A +F S +K I + L+
Sbjct: 182 KKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF-DSMTKRGLKPEITTYGTLLQGYAT 240
Query: 164 CRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + +H + M G +P+ + IL+ ++ EA + F ++ Q+G
Sbjct: 241 -KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV----FSKMRQQGLN 295
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGA 280
+ V Y ++ LC G+++DAM E+++ +GL + + LC CN E A
Sbjct: 296 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER---A 352
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ LI E L RG + ++++ EGR++E +K+ D M G P ++ Y +
Sbjct: 353 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 412
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
G +DEA +++ MV P Y+ L+ G C A++ ++M G
Sbjct: 413 YCLAGKMDEATKLL-ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS-GVS 470
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ TY I++ GL + R A + + + TYN+++ GLC
Sbjct: 471 PDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 180/421 (42%), Gaps = 38/421 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L ++ R TE +++ D M + + + + T ++ YA G L E L +
Sbjct: 195 TYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 254
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------LLMD 159
+ F+ L+ K+ K+E A ++F K R Q LN ++
Sbjct: 255 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF--------SKMRQQGLNPNAVTYGAVIG 306
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+LC+ R + A+ F++M +G P Y+ L+ GLC + A L+ M R
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---- 362
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + + + +++ + C +G++ ++ ++ + ++R G+K + C G+ ++
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK-MDE 421
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L+ + G P +YS + R+ + + EM + G P ++ Y L
Sbjct: 422 ATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQ 481
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
LF+ A E+ + K + YNI+L GLC + A+ + + C
Sbjct: 482 GLFQTRRTAAAKELYVG-ITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNL-----C 535
Query: 400 VAN----GETYGILVDGLCRDGRFLEASRVL----EEMLIRSYWPCVETYNVLIRGLCSI 451
+ + T+ I++D L + GR EA + L+ +YW TY ++ +
Sbjct: 536 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW----TYRLMAENIIGQ 591
Query: 452 G 452
G
Sbjct: 592 G 592
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI-RTYARAGQLNEAVSLFKN 105
VY S+I L N+ +E+I +M D C +++F +I ++ + G++ E+ LF
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + +++TL+ K++ A L L S +K + + L++ C+
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKL-LASMVSVGMKPDCVTYSTLINGYCKIS 452
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R AL +F+EM+ G PD +Y+I+++GL RR A L + I++ G ++
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL----YVGITKSGRQLEL 508
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC DA+++ + + LK ++R I + + AK L
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKL-EARTFNIMIDALLKVGRNDEAKDLFV 567
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P+ +Y MA ++ +G + E D++ M G
Sbjct: 568 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG--------- 398
++A V +E + +G +P V YNILL GLCD S A+ L M+ G
Sbjct: 34 EDARHVFDELLRRG--IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 399 -CVANG--------------------------ETYGILVDGLCRDGRFLEASRVLEEMLI 431
V NG TY ++ LC+ +A VL M+
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
P TYN ++ G CS G+ EA+++L++M S PD+ ++SL+ +C N
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 206
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 165/343 (48%), Gaps = 13/343 (3%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+++ +LN+L++ C + + V ++ G PD + + LMKGLC + ++
Sbjct: 41 IRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSL 100
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
H ++ +G D V Y TLL LC G+ + A+++L I + + + I
Sbjct: 101 HF----HDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTI 156
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D + + A L +E RG P +Y+ + G+++ +LDEM K
Sbjct: 157 IDGLCKD-KLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 327 FWPSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
P + +Y + AL K+G V EA L V+ +E +K P V Y+ L+ G C G
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK----PGVVTYSTLMDGYCLVGEV 271
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A M Q+G N +Y I+++GLC+ R EA +L EML ++ P TYN
Sbjct: 272 QNAKQIFHAMV-QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
LI GLC G+ A+ + EM + + D+ ++SL+ ++C N
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 8/367 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TLL + K + A + LR + + N ++D LC+ + + A ++ E
Sbjct: 117 SYGTLLNGLCKIGETRCA-VKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
MD +G +PD +Y L+ G C +L A LL M + G + IY L+ ALC
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG----VYIYNILINALC 231
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+G +++A +L + ++G+K + C GE ++ AK + + + G P++
Sbjct: 232 KEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGE-VQNAKQIFHAMVQMGVNPNV 290
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
SY+ M L R+ E +L EM K P V Y + + L K G + AL ++ E
Sbjct: 291 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 350
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+G V Y LL LC N A KM K+ G TY L+DGLC+
Sbjct: 351 MHHRGQPADVV-TYTSLLDALCKNQNLDKATALFMKM-KERGIQPTMYTYTALIDGLCKG 408
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR A + + +L++ V TY V+I GLC G EA+ +M +P+ +
Sbjct: 409 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Query: 477 SSLVASV 483
++ S+
Sbjct: 469 EIIIRSL 475
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 202/445 (45%), Gaps = 10/445 (2%)
Query: 42 RHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
RH P+ + ++G L++ + + QM+ I + GQ+ +
Sbjct: 5 RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+ + + T + NTL+K + + +++ + + F + S L++
Sbjct: 65 FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKS-LHFHDKVVAQGFQMDHVSYGTLLN 123
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ + + ++ + P+ Y+ ++ GLC D+ +NEA Y ++ + +
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA----YDLYSEMDAR 179
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D + Y TL++ C G++ A +L++++ K + + + C +G +++
Sbjct: 180 GIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG-NVKE 238
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK+L+ G P + +YS + G + ++ M G P++ Y +
Sbjct: 239 AKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMIN 298
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K VDEA+ ++ E M+ VP YN L+ GLC +G A+ + +M + G
Sbjct: 299 GLCKCKRVDEAMNLLRE-MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR-GQ 356
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
A+ TY L+D LC++ +A+ + +M R P + TY LI GLC G+ A
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+ ++ + D+ ++ +++ +C
Sbjct: 417 LFQHLLVKGCCIDVWTYTVMISGLC 441
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 168/383 (43%), Gaps = 41/383 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+ + +++ + R N +Y ++I L + + E ++ +M + T
Sbjct: 134 AVKLLRMIEDR--STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS---- 141
I + GQL A SL + N +N L+ + KE + EA ++L + +
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 142 --------------CYGWEVKS---------------RIQSLNLLMDVLCQCRRSDLALH 172
C EV++ + S N++++ LC+C+R D A++
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ +EM + PD +Y+ L+ GLC R+ A +L+ M R G D+V Y +LL
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR----GQPADVVTYTSLL 367
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
ALC + A + K+ +G++ + C G ++ A+ L L++G
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR-LKNAQELFQHLLVKGC 426
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+ +Y+ M L EG E + +M G P+ V +E + +LF+ D+A +
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 486
Query: 353 VIEEEMVKGTFVPTVRVYNILLK 375
++ E + KG V +V ++ ++
Sbjct: 487 LLHEMIAKGLLVLDFKVADVFVQ 509
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 202/498 (40%), Gaps = 55/498 (11%)
Query: 31 FKEAKEKYPNYRHNG-----PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EAK + R NG Y M+ S+ ++ E ++ +M + CE V +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + +AG+++EA +F + ++NTLL + KE +++ A LF S
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF-ESMIEK 606
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N L+D C+ +LAL +F +M C PD +Y+ ++ GL + ++N A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Query: 206 THLLYSMFWRISQ--KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
FW Q K D V TLL L G+I DA+ I + + ++ +R
Sbjct: 667 -------FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQ-VRFRVNRS 718
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI------------------------------ 293
DL E + E L+ GI
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778
Query: 294 -------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+LASY+ + +L + + +M+ G P + LA K G
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ E E+ +E M+ P YNI++ L + N A+ + + TY
Sbjct: 839 ITELFELYKE-MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRTY 896
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
G L+DGL + GR EA R+ EEM P +N+LI G IG A + M++
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD+ ++ LV +C
Sbjct: 957 EGIRPDLKSYTILVDCLC 974
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 201/491 (40%), Gaps = 32/491 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T + L + K++ + + KE ++ R N + I +L + +I E
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDL--GLRPNVYTFTICIRVLGRAGKIDEAY 282
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-------SQFNCVNWTQSF 118
E+ +M + C + I AGQL A LF + Q + F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 119 NTLLK-EMVKE--SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
N + KE S++EA + + + +L+DVLC+ R D A F
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYM-----------PDVVTFTILVDVLCKARDFDEAFATFD 391
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
M QG P+ +Y+ L+ GL R+ +A LL +M G Y +
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM----ESVGVQPTAYTYNIFIDYF 447
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
G+ A++ EK+ KG+ P L + + AK++ N G P
Sbjct: 448 GKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ M G++ E +L EM G P +++ + + +L+K G VDEA ++ +
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
M PTV YN LL GL G A+ + M ++ C N ++ L+D C+
Sbjct: 567 R-MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK-KCSPNTISFNTLLDCFCK 624
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD-IS 474
+ A ++ +M + P V TYN +I GL K A W + ++ PD ++
Sbjct: 625 NDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA-FWFFHQLKKSMHPDHVT 683
Query: 475 VWSSLVASVCC 485
+ + L V C
Sbjct: 684 ICTLLPGLVKC 694
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 118/539 (21%), Positives = 215/539 (39%), Gaps = 77/539 (14%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K P+ AL F E +P H M+ L +++ +M V + M+
Sbjct: 95 VLKSMTDPIRALSYFYSISE-FPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKII 153
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
+ T + + G L + ++ + + V S+N L+ ++ +S +
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI-QSGFCGEAL 212
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
R +K +++ + LM L + R S++ + + +EM+ G P+ ++ I ++ L
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+++EA Y +F R+ +G G D+V Y L+ ALC+ G++++A ++ K+ G
Sbjct: 273 GRAGKIDEA----YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSL----------------------------INEAL 288
K P + L ND D++ K +EA
Sbjct: 329 K-PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 289 I-------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+G +P+L +Y+ + L GRI + K+L M + G P+ Y +
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447
Query: 342 FKDGMVDEALEVIEEEMVKGT----------------------------------FVPTV 367
K G +A+E E+ KG P
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN+++K G AV L +M + GC + L+D L + GR EA ++ +
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRN-GCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
M P V TYN L+ GL G+ +A+ E MI + P+ +++L+ C N
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 204/504 (40%), Gaps = 71/504 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V S+I L ++ R+ E ++ D+MK + T + + G++ +A+ LF+++
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C T SFNTLL K ++E A +F + + K + + N ++ L + +
Sbjct: 604 IEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV-MDCKPDVLTYNTVIYGLIKENK 662
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL----LYSM-------FWR 215
+ A F ++ + +PD + L+ GL ++ +A + +Y + FW
Sbjct: 663 VNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721
Query: 216 ISQKGSGEDIVIYRTLLFA---------------------LCDQGKIQDAMQILEKILRK 254
G+ + + + ++FA LC + A QI +K +K
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+P + + + E A L + G P +++ + G+I E
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ EM ++ P + Y +++L K +D+AL+ + +V F PT R Y L+
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD-LVSSDFRPTPRTYGPLI 900
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVAN--------------GET--------------- 405
GL G A+ ++MS GC N G+T
Sbjct: 901 DGLAKVGRLEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 406 ------YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
Y ILVD LC GR EA E+ P YN +I GL + EA+
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
EM ++ +PD+ ++SL+ ++
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNL 1043
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 163/409 (39%), Gaps = 52/409 (12%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYAS---MIGILSESNR 60
R L P L +++ K K L A +IF +K+ P AS +IG L E +
Sbjct: 750 REDSFLIP--LVRVLCKHKRELYAYQIF----DKFTKKLGISPTLASYNCLIGELLEVHY 803
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ ++ MK C F + + ++G++ E L+K + C ++N
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
++ + K + L+ A + F + + ++ L+D L + R + A+ +F+EM
Sbjct: 864 VISSLAKSNNLDKA-LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P+ ++IL+ G A L F R+ +G D+ Y L+ LC G+
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQL----FKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ +A+ ++ GL P +Y+
Sbjct: 979 VDEALYYFNELKSTGLD------------------------------------PDFIAYN 1002
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L R+ E + +EMR +G P L Y + + L GMV++A + EE +
Sbjct: 1003 RIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
G P V YN L++G + N A K M GC N TY L
Sbjct: 1063 G-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQL 1109
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 193/456 (42%), Gaps = 13/456 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F +K + + + Y ++I L + N++ Q+K S T
Sbjct: 631 ALKMF--SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL 687
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF-NTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + GQ+ +A+S+ ++ +SF L+ + E++++ A I+F
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA-IIFAEELVLN 746
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNE 204
+ L L+ VLC+ +R A +F + + G P SY+ L+ L +
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A + +F + G D + LL GKI + ++ ++++ + K P + +
Sbjct: 807 A----WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCK-PDAITY 861
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ A + + P+ +Y + L GR+ E ++ +EM
Sbjct: 862 NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P+ ++ + K G + A ++ + MV P ++ Y IL+ LC AG
Sbjct: 922 YGCKPNCAIFNILINGYGKIGDTETACQLFKR-MVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A+ Y ++ K G + Y +++GL + R EA + EM R P + TYN L
Sbjct: 981 EALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ L G +A EE+ PD+ +++L+
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 50/405 (12%)
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAHIL 137
+DS +R + + A +F ++ ++ T S+N L+ E+++ E A L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
F + + N+L+ V + + +++EM + C PD +Y+I++ L
Sbjct: 811 F-KDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869
Query: 198 NDRRLNEATHLLYSMF---WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
L++A Y + +R + + Y L+ L G++++AM++ E++
Sbjct: 870 KSNNLDKALDFFYDLVSSDFRPTPR-------TYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G K P I + D E A L + G P L SY+ + L GR+ E
Sbjct: 923 GCK-PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+E+++ G P + Y + L K ++EAL + E +G VP + YN L+
Sbjct: 982 ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG-IVPDLYTYNSLM 1040
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
L AG M +Q A R+ EE+ +
Sbjct: 1041 LNLGLAG-----------MVEQ-------------------------AKRMYEELQLAGL 1064
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
P V TYN LIRG A + M+ P+I ++ L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 221/496 (44%), Gaps = 24/496 (4%)
Query: 7 RLLTP-TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
R+ P T+L Q++ L+ FK ++++Y P + ++ L+ S R ++++
Sbjct: 40 RVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPT-SKVLHFLANSKRYSKVR 98
Query: 66 EVIDQMKGDSCECKDSVF-----------ATA------IRTYARAGQLNEAVSLFKNLSQ 108
+D + SVF ATA + Y + +L+ A F
Sbjct: 99 SFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKD 158
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
+ S N LL +VKE+K+ ++ + + + + + N+ ++ LC+ + +
Sbjct: 159 YGFKLSLTSCNPLLSALVKENKIGDVEYVY-KEMIKRRIHTNLNTFNIFINGLCRAGKLN 217
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A ++M G P+ +Y+ L+ G C + M ++ K + V +
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNE-VTF 276
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ C + A + E++ ++GLK + + CN+G+ +E A L ++ +
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK-LEEAIDLWDKMV 335
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P++ +Y+A+ + + E KV D++ + P+++ + + A K+GM++
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
E + + +G +P V YN L+ GLC + A L +M + G + TY I
Sbjct: 396 EGFSLCSSMLDEG-ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK-GLKGDVVTYNI 453
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC++ + A ++L EM P TYN L+ G C GK A+ M +
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 469 KLPDISVWSSLVASVC 484
K P++ ++ L+ C
Sbjct: 514 KQPNVVTYNVLIKGYC 529
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 13/398 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ L + N+I +++ V +M + F I RAG+LN+A +++ +
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 111 CVNWTQSFNTLLKEMVKES---KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++NTL+ K K+ A F++ ++ + N L+D C+
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEA-FMKEMLANKICPNEVTFNTLIDGFCKDENV 289
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSGEDIV 226
A F+EM QG P+ +Y+ L+ GLCN+ +L EA L W ++ G +IV
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL-----WDKMVGLGLKPNIV 344
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C + +++A ++ + + ++ L + + C +G EG SL +
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF-SLCSS 403
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G +P++++Y+ + L + + ++L+EM KG +V Y + L K+
Sbjct: 404 MLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDK 463
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
A E + EM P YN L+ G C G A+ +M K+ N TY
Sbjct: 464 SRNA-EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK-QPNVVTY 521
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+L+ G C+ + A+ +L EML + P TY+++
Sbjct: 522 NVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 11/334 (3%)
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
VF + G P + I M L + L H Y F R G + LL
Sbjct: 115 VFHSLLLDGGRPGATALIIDMLVLAYVKNL--ELHCAYEAFTRAKDYGFKLSLTSCNPLL 172
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
AL + KI D + ++++++ + + + C G+ + A+ I + G
Sbjct: 173 SALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGK-LNKAEDAIEDMKAWGI 231
Query: 293 IPSLASYSAMAIDLY----NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
P++ +Y+ + +D Y + G++ + + + EM P+ V + + KD V
Sbjct: 232 SPNVVTYNTL-VDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A + EE M K P + YN L+ GLC+ G A+ KM +G N TY
Sbjct: 291 AAKKAFEE-MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV-GLGLKPNIVTYNA 348
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L++G C+ EA++V +++ + P V T+N +I C G E M+ +
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 469 KLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
LP++S ++ L+A + C DL ++ L ++ +
Sbjct: 409 ILPNVSTYNCLIAGL-CRKQDLQAAKELLNEMEN 441
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 144/355 (40%), Gaps = 62/355 (17%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K ++ A K F+E +++ + N Y S+I L + ++ E ++ D+M G +
Sbjct: 285 KDENVAAAKKAFEEMQKQ--GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+ I + + + EA +F ++S+ V +FNT++ KE +E L
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL-C 401
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
S + + + N L+ LC+ + A + EM+ +G D +Y+IL+ GLC +
Sbjct: 402 SSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKN 461
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ A LL MF G + V Y TL+ C +GK++ A+ + ++
Sbjct: 462 DKSRNAEKLLNEMF----NLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM-------E 510
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
K R+ P++ +Y+ + ++ + +L
Sbjct: 511 KERKQ-----------------------------PNVVTYNVLIKGYCKINKLEAANGLL 541
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV--RVYNI 372
+EM KG P+ Y +++ EM++ F P + +YNI
Sbjct: 542 NEMLEKGLNPNRTTY-----------------DIVRLEMLEKGFSPDIEGHLYNI 579
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 22/415 (5%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ +M +C A R G+ ++A L K + + V T +++ ++
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +K+E A +LF + V + + +L+D C+ + A +F+EM GC P
Sbjct: 298 LCHATKVEKAFLLF-QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y L+ +++ +A +F R+ G + V Y L+ LC G I A
Sbjct: 357 TVVTYTALIHAYLKAKQVPQAN----DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 245 MQILEKILRKGLKA------PKSRRHRIDLCPCNDGEDIEG---------AKSLINEALI 289
++ K++ A P RH + G ++G A L++ L
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ Y A+ G+I +V +M G+ PS+ Y + + +FKDG +D
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A++V+ + M+K + P V Y ++ GLC G S A+ L M ++ GC N TY L
Sbjct: 533 AMKVLSQ-MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK-GCSPNVVTYTAL 590
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+DGL + G+ + + +M + P TY VLI LC+ G +A + L EM
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 198/458 (43%), Gaps = 28/458 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + ++ K +I+ M + C S+F + + +Y A L
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-RSCYGWEVKSR--IQSLNL--LM 158
++ C +N + + + KL + +L L YG + + + +N+
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC + D A + +EM +G PD +Y ++ LC+ ++ +A + +F +
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA----FLLFQEMKM 316
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D+ Y L+ + C G I+ A + E++ G +P + + + +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTALIHAYLKAKQVP 375
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM------RTKGFW---- 328
A + + + G P+ +Y A+ L G I + +V ++ F+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435
Query: 329 ------PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P++V Y A + L K VD A E+++ + G P VY+ L+ G C AG
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPNHIVYDALIDGFCKAGK 494
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A +M+K G + + TY L+D + +DGR A +VL +ML S P V TY
Sbjct: 495 IDSAQEVFLQMTK-CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+I GLC IG+ +A+ L M + P++ +++L+
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 183/447 (40%), Gaps = 67/447 (14%)
Query: 80 DSVFAT-AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D+V T I A +EA+S + +C+ ++ TLL +K+ +L
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL------- 158
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
GW C+R + M +GC P+ ++ L+ CN
Sbjct: 159 -----GW------------------CKR------IINMMMTEGCNPNPSLFNSLVHSYCN 189
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI--QDAMQILEKILRKGL 256
++ A Y + R++ G V+Y + ++C Q K+ D + + EKI + L
Sbjct: 190 EKDYAYA----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245
Query: 257 KA----PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
A K C C G+ + A LI E + +G +P ++YS + L + ++
Sbjct: 246 AANCVLNKVNVANFARCLCGVGK-FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 304
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ + EM+ G P + Y + + K G++++A + EE G PTV Y
Sbjct: 305 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTA 363
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ A A +M GC N TYG LVDGLC+ G +A V +++
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422
Query: 433 S-------YWPC---------VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
S Y+PC V TY L+ GLC K A L+ M+S P+ V+
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482
Query: 477 SSLVASVCCNTADLNVCRKTLEQLSSC 503
+L+ C ++ ++ Q++ C
Sbjct: 483 DALIDGF-CKAGKIDSAQEVFLQMTKC 508
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 207/509 (40%), Gaps = 69/509 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K + + Y+ +I L + ++ + + +MK +
Sbjct: 272 AFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SC 142
I ++ +AG + +A LF+ + C ++ L+ +K ++ A+ +F R C
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM----------------DFQGCYPDR 186
+V + L+D LC+ A V+ ++ D P+
Sbjct: 390 RPNDV-----TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ GLC +++ A LL +M G + ++Y L+ C GKI A +
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAML----SSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 247 ILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ + G L + + ID DG ++ A ++++ L P++ +Y+AM
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRM-FKDGR-LDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G + K+L M KG P++V Y A + L K G +D +L++ + KG P
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SP 617
Query: 366 TVRVYNILLKGLCDAG--------------------------------NSAVAVMYLKKM 393
Y +L+ LC AG S +A + + +
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 677
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--IRSYWPCVETYNVLIRGLCSI 451
+ G V YG+L+D + GR A + +EM+ S + Y LI+ LC
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ EA EM + +P++SV+ L+
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLI 766
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 190/464 (40%), Gaps = 61/464 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ I + + + ++M+ C + I Y +A Q+ +A +F +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR---------SCYGWEVKSR------I 151
C ++ L+ + K + A ++ + S + + + R +
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D LC+ + D A + M GC P+ Y L+ G C +++ A +
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV--- 501
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-L 268
F ++++ G + Y +L+ + G++ AM++L ++L+ P + ID L
Sbjct: 502 -FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC-TPNVVTYTAMIDGL 559
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C + E SL+ E +G P++ +Y+A+ L G+I + +M KG
Sbjct: 560 CRIGESEKALKLLSLMEE---KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 616
Query: 329 PSLVMYEAKLAALFKDGMVDEA---------------------------------LEVIE 355
P+ V Y + L G++D+A L ++E
Sbjct: 617 PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILE 676
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETYGILVDGLC 414
E GT VP VY +L+ AG +A+ K+M + V + + Y L+ LC
Sbjct: 677 EMESYGT-VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALC 735
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ EA R+ EM R + P + + LI+GL + K EA+
Sbjct: 736 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 23/342 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ L +++++ E++D M CE V+ I + +AG+++ A +F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ + ++ +L+ M K+ +L+ A + L + + ++D LC+
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA-MKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
S+ AL + M+ +GC P+ +Y L+ GL +++ L +F ++S+KG
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID----LSLDLFTQMSRKGCSP 617
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS-RRHRIDLCPCND-GEDIEGAK 281
+ V YR L+ LC G + A +L ++ K PK + +R C + +
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEM--KQTYWPKYLQGYR---CAIQGFSKSFIASL 672
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLV-----MYE 335
++ E G +P +A M ID +++ GR+ ++ EM PS V MY
Sbjct: 673 GILEEMESYGTVP-IAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYA 728
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ + AL V+EA + EM + FVP + V+ L+KGL
Sbjct: 729 SLIQALCLASQVEEAFR-LYSEMTRRGFVPELSVFVCLIKGL 769
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 141/366 (38%), Gaps = 37/366 (10%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA------- 205
+ N L+ VL + DL V +EM G DR + LC + R +A
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101
Query: 206 ---------THLL------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
TH++ S R+ ++V YRTLL + ++
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 161
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+I+ ++ +G S + + CN+ +D A L+N G P Y+
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNE-KDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220
Query: 305 DLYNEGRIVEGD------KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ + ++ D K+ EM + V L G D+A ++I+E M
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG FVP Y+ ++ LC A A + ++M K VG + TY IL+D C+ G
Sbjct: 281 RKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGL 338
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A + EEM P V TY LI + +A M+ P+ + +
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 479 LVASVC 484
LV +C
Sbjct: 399 LVDGLC 404
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +Y+A+ L + G++ G +V EM GF AL K+G +AL++
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
IE E K + TV + ++ GL +A A+ +L +M + C+ N TY L+ G
Sbjct: 98 IEREDFK---LDTVLCTH-MISGLMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGF 152
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+ + R++ M+ P +N L+ C+ A L M + P
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212
Query: 474 SVWSSLVASVC 484
V++ + S+C
Sbjct: 213 VVYNIFIGSIC 223
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 198/481 (41%), Gaps = 51/481 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I R ++ + M + C+ F+T I + G + EA +F+ +
Sbjct: 316 YNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +NTL+ K + A++L+ + + N+L+ + +
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLY-EEMRDKGIAPDGATFNILVAGNYKYGKE 434
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ +F++ PD Y + + GLC +L+EA L M +KG +V
Sbjct: 435 ADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDML----EKGMPPSVVA 490
Query: 228 YRT-----------------------------------LLFALCDQGKIQDAMQILEKIL 252
+ + +L L +G++Q+A +L K++
Sbjct: 491 FNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI 550
Query: 253 RKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
KGL +++ DG D GA SL E RG P ++SA L
Sbjct: 551 DKGLPV-----NKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSK 605
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G + E + EM KGF P+ +Y + + L G + EAL+ +E EM + +P +
Sbjct: 606 AGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK-LEREMRQKGLLPDIF 664
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
NI++ G C G A +M +G + TY L+ G C+ + A L +
Sbjct: 665 TTNIIINGFCKEGRMKSAFDAFAEM-HHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNK 723
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
M + P + TYN+ I+G CS K AV L+E+I+ +P+ +++++ +VC +
Sbjct: 724 MYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDML 783
Query: 489 D 489
D
Sbjct: 784 D 784
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 183/432 (42%), Gaps = 48/432 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y + L + ++ E + ++ M F + I Y+RAG + A +K +
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
F V + + +++L + K+ +L EA +L+ G V + +L+D +
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK--VAFTVLLDGYFKVG 572
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A ++ EM+ +G PD ++ + GL + EA Y F +S+KG +
Sbjct: 573 DTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEA----YEAFSEMSKKGFVPNN 628
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+Y +L+ LC+ GK+ +A+++ ++ +KGL
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGL----------------------------- 659
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+P + + + + EGR+ EM G P V Y + K
Sbjct: 660 -------LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVL 712
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ A E + + G + P + YNI ++G C + + AV L ++ VG V N T
Sbjct: 713 DMVSADEFLNKMYASG-WDPDITTYNIRIQGFCSSQKISRAVTMLDELIA-VGVVPNTVT 770
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y +++ +C D L+ + VL L++ ++ P V T NVL+ C G +A++W +++
Sbjct: 771 YNTMMNAVCTD--MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKL 828
Query: 465 ISQAKLPDISVW 476
+ I W
Sbjct: 829 NKLLRADFIGYW 840
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 179/458 (39%), Gaps = 45/458 (9%)
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E E++ +M+ S + R R G L + + + +FN ++
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMI 285
Query: 123 KEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ L A +LF+ + E + + N+L++ R+ AL M G
Sbjct: 286 LCFCQKGYLRVAESLLFVMPKFCCE--PDVYAYNILINAYRIRGRTSDALGFLHLMIKNG 343
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P ++ ++ CN+ + EA + F I + G ++ +Y TL+ +
Sbjct: 344 CKPSLITFSTIITAFCNEGNVVEARKI----FEGIQEVGLSPNVAMYNTLMSGYFKARDV 399
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A + E++ KG+ AP I + + L + + +P + Y
Sbjct: 400 CQANMLYEEMRDKGI-APDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDV 458
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA--------------------- 340
L G++ E + L++M KG PS+V + + +AA
Sbjct: 459 SVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFG 518
Query: 341 --------------LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
L K G + EA +++ + + KG V V + +LL G G++A A
Sbjct: 519 LVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKV-AFTVLLDGYFKVGDTAGA 577
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+M + G + + +DGL + G EA EM + + P YN LI
Sbjct: 578 HSLWYEMEAR-GICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIH 636
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC+ GK +EA+ EM + LPDI + ++ C
Sbjct: 637 GLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFC 674
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 131/330 (39%), Gaps = 40/330 (12%)
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D + LM+G N E+ +L M + + S I I LL + D G +
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRM-REVGVRPSSSAISILFRLLLRVGDYGSVW-- 263
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDG------------------EDIEGAKSLINE 286
++L ++R G + + + LC C G D+ LIN
Sbjct: 264 -KLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINA 322
Query: 287 ALIRGGI----------------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
IRG PSL ++S + NEG +VE K+ + ++ G P+
Sbjct: 323 YRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPN 382
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ MY ++ FK V +A ++ EEM P +NIL+ G G A +
Sbjct: 383 VAMYNTLMSGYFKARDVCQA-NMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ S V + Y + V GLC G+ EA + LE+ML + P V +N +I
Sbjct: 442 RDWSLS-SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSR 500
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G + A + M+ +P S SS++
Sbjct: 501 AGFEDNAHKAYKIMLMFGLVPSSSTCSSML 530
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 202/481 (41%), Gaps = 17/481 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R++ + +++ P AL++F A + P H M+ ++ R+ +M +
Sbjct: 64 RVVGTDSVVHMLRSAPDPAEALELFTAAARQ-PTKVHTTESCNYMLELMRAHGRVGDMAQ 122
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V D M+ + FAT G L A + + ++N L+ +V
Sbjct: 123 VFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLV 182
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K S +A + ++ + +++ ++LM + R D L + EM+ +G P+
Sbjct: 183 K-SGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNV 241
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY I ++ L R +EA H+L ++ G D+V + ++ LCD G++ DA
Sbjct: 242 YSYTICIRVLGQAARFDEAYHIL----GKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKA 297
Query: 247 ILEKILRKGLKAPKSRRHRID----LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+ K +KA + R+ L C D D + + N + G ++ SY+A+
Sbjct: 298 VFWK-----MKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L GR+ E V DEM+ KG P Y + ++ K M D ALE+ G
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P + + + +G S A+ + M K G V + ++ L GR A
Sbjct: 413 -SPNGYTHVLFINYYGKSGQSLKAIQRYEHM-KSKGIVPDVAAANAVLYSLAGSGRLGMA 470
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
RV E+ P TY ++I+ K EA+ + +M+ +PD+ +SL+ +
Sbjct: 471 KRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDT 530
Query: 483 V 483
+
Sbjct: 531 L 531
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 200/478 (41%), Gaps = 53/478 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S++++ E M C + I T + G+ NEA LF L
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKL 547
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++NTLL + +E K++ L R+ Y + + N ++D L +
Sbjct: 548 KEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIY----PPNLITYNTVLDCLSK 603
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A+ + M +GC PD SY+ +M GL + RL EA + MF ++ +K
Sbjct: 604 NGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEA----FRMFCQM-KKILAP 658
Query: 224 DIVIYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRI---------------- 266
D T+L + G +++A+ + E IL+ G KS H +
Sbjct: 659 DYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEF 718
Query: 267 --------------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
LCP C + +E A L N+ G SY+++ L
Sbjct: 719 AENIASRGILLNDFFLCPLIRHLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLV 777
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+E I + + EM+ G P Y L A+ K V+E L+V ++EM + + T
Sbjct: 778 DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKV-QKEMHRKGYESTY 836
Query: 368 RVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
YN ++ GL + A+ +Y MS+ G TYG L+DGL + G+ ++A +
Sbjct: 837 VTYNTIISGLVKSKRLEQAIDLYYNLMSE--GFSPTPCTYGPLLDGLLKSGKMVDAENLF 894
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EML P YN+L+ G G E+M+ Q PDI ++ L+ ++C
Sbjct: 895 NEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLC 952
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 180/439 (41%), Gaps = 47/439 (10%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMK----GDSCECKDSVFATAIRTYARAGQLNEAVS 101
P YA++ IL + MKE + +K C S F + + + + +++
Sbjct: 658 PDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIE 717
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+N++ + L++ + K K AH LF G V + S N L+ L
Sbjct: 718 FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLF-NKFKGLGVSLKTGSYNSLIRGL 776
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
D+A +F EM GC PD +Y++++ + R+ E + M +KG
Sbjct: 777 VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM----HRKGY 832
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
V Y T++ L +++ A+ + ++ +G PC G ++G
Sbjct: 833 ESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP----------TPCTYGPLLDG-- 880
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L G++V+ + + +EM G P+ +Y L
Sbjct: 881 ------------------------LLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGH 916
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
G + ++ E+ MV+ P ++ Y IL+ LC AG + Y +++ ++G
Sbjct: 917 RIAGNTENVCQLFEK-MVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQL-HELGLEP 974
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y +L+DGL + R EA + EM + P + TYN LI L GK EA
Sbjct: 975 DLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMY 1034
Query: 462 EEMISQAKLPDISVWSSLV 480
EE++ + P + +++L+
Sbjct: 1035 EELLRKGWKPSVFTYNALI 1053
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 11/357 (3%)
Query: 8 LLTPTYLSQIIK---KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
LL +L +I+ K K L A ++F + K + + Y S+I L + N I
Sbjct: 728 LLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS--YNSLIRGLVDENLIDIA 785
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ +MK C + + + ++ ++ E + + K + + + ++NT++
Sbjct: 786 EDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISG 845
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+VK +LE A L+ + + L+D L + + A ++F EM GC P
Sbjct: 846 LVKSKRLEQAIDLYY-NLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEP 904
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ Y+IL+ G R+ T + +F ++ ++G DI Y L+ LC G++ D
Sbjct: 905 NCTIYNILLNG----HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDG 960
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++ GL+ P + + + E IE A SL NE +G IP+L +Y+++ +
Sbjct: 961 LCYFRQLHELGLE-PDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLIL 1019
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
L G+ E ++ +E+ KG+ PS+ Y A + G D A + +V G
Sbjct: 1020 HLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGG 1076
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 2/187 (1%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + L G E +V M G PS+ Y + A K VD L ++ E
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G P V Y I ++ L A A L KM GC + T+ +++ LC G
Sbjct: 233 EARGV-KPNVYSYTICIRVLGQAARFDEAYHILGKMEDS-GCKPDVVTHTVIIQVLCDAG 290
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R +A V +M P TY L+ G V M++ +I ++
Sbjct: 291 RLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 478 SLVASVC 484
++V ++C
Sbjct: 351 AVVDALC 357
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 21/391 (5%)
Query: 98 EAVSLFKNLSQ---FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
EA+ L +++ +NC S++T++ KE +++ A+ LF G + +
Sbjct: 183 EALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLF-DEMIGQGFPPDVVTY 241
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+ L+D LC+ + + A + Q M +G P+ +Y+I+++G C+ +L EA LL M
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM-- 299
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
S G D+V Y L+ C G+ +A + + ++RKG K P S + I L G
Sbjct: 300 --SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQK-PNSTIYHILL----HG 352
Query: 275 EDIEGAKSLINEAL---IRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+GA + + L IR GIP +++ + G + + EMR G P
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMY 389
+V Y + L K G V++A+ + MV P + + L+ GLC G V +
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQ-MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELA 471
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ +++ G + ++D LC++GR +EA + ++ P V +YN LI G C
Sbjct: 472 FEMINR--GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+GK E++ + M+S PD +++L+
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 208/475 (43%), Gaps = 53/475 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I L ++ + + + ++ M + IR Y GQL EAV L K +S
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300
Query: 108 ---------------QFNC-VNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVK 148
Q+ C + ++ MV++ + + HIL +G+ K
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL----HGYATK 356
Query: 149 SRIQSLNLLMDVLCQ--------------CRRS-----DLALHVFQEMDFQGCYPDRESY 189
+ + L+D++ + C + D A+ F EM G PD SY
Sbjct: 357 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 416
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
++ LC R+ +A + F ++ +G +I+ + +L+ LC G+ + ++
Sbjct: 417 STVIHILCKIGRVEDAVY----HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-N 308
+++ +G+ + I C +G +E A+ + + G P++ SY+ + ID Y
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVE-AQDFFDMVIHIGVKPNVVSYNTL-IDGYCF 530
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G++ E K D M + G P Y A L FK+G V++AL + E K +
Sbjct: 531 VGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAI- 589
Query: 369 VYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
NI+L GL AG A +Y+K + + G ETY ++ GLC + EA R+ E
Sbjct: 590 TSNIILHGLFQAGRIVAARELYMKMVDR--GTQLRIETYNTVLGGLCENSCVDEALRMFE 647
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + + V T+N++I L +G+ EA M+ + +P + +S ++ S
Sbjct: 648 DLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKS 702
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 201/441 (45%), Gaps = 16/441 (3%)
Query: 53 GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA---VSLFKNLSQF 109
G L + + E++ Q + S +SV R + + + A VSLF +++
Sbjct: 26 GSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMAR- 84
Query: 110 NCVNWTQSFNTLLKEMVK----ESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQC 164
+ VN + ++ +++ +L+ A F GW V++ +LN L+ LC
Sbjct: 85 SGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQN--VTLNQLIKGLCDG 142
Query: 165 RRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R+D A+ VF+ M G PD SY+ L+KGLC +++ EA LL M S
Sbjct: 143 KRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCS-P 201
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y T++ +G++ A + ++++ +G P + + + + A+++
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGF-PPDVVTYSSLIDGLCKAQAMNKAEAI 260
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ +G +P+ +Y+ M + G++ E ++L +M G P +V Y + K
Sbjct: 261 LQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCK 320
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G EA V + + KG P +Y+ILL G G + + V L + + G
Sbjct: 321 IGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKG-ALIDVRDLLDLMIRDGIPFEH 378
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+ IL+ + G +A EM P V +Y+ +I LC IG+ +AV +
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438
Query: 464 MISQAKLPDISVWSSLVASVC 484
M+S+ P+I ++SL+ +C
Sbjct: 439 MVSEGLSPNIISFTSLIHGLC 459
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 191/440 (43%), Gaps = 8/440 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+++I + + + + D+M G +++ I +A +N+A ++ +++
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ T+++N +++ +LE A + L+ G ++ + + LL+ C+ R
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEA-VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A VF M +G P+ YHIL+ G L + LL M + G +
Sbjct: 325 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI----RDGIPFEHRA 380
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ A G + AM ++ + GL+ + C G +E A N+
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGR-VEDAVYHFNQM 439
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G P++ S++++ L + G + +++ EM +G P + + L K+G V
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
EA + + + G P V YN L+ G C G ++ +M +G + TY
Sbjct: 500 VEAQDFFDMVIHIGV-KPNVVSYNTLIDGYCFVGKMDESIKQFDRMV-SIGLRPDSWTYN 557
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L++G ++GR +A + EM + C T N+++ GL G+ A +M+ +
Sbjct: 558 ALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617
Query: 468 AKLPDISVWSSLVASVCCNT 487
I +++++ +C N+
Sbjct: 618 GTQLRIETYNTVLGGLCENS 637
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 273 DGEDIEGAKSLINEALIR-GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW--- 328
DG+ + A ++ + G P + SY+A+ L E + E ++L M G +
Sbjct: 141 DGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCS 200
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++V Y + FK+G VD+A + +EM+ F P V Y+ L+ GLC A A
Sbjct: 201 PNVVSYSTIIDGFFKEGEVDKAY-FLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEA 259
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L+ M + G + N TY I++ G C G+ EA R+L++M P V TY +LI+
Sbjct: 260 ILQHMFDK-GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYY 318
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
C IG+ EA + M+ + + P+ +++ L+ A ++V
Sbjct: 319 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 362
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 136/362 (37%), Gaps = 49/362 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+ F E ++ R + Y+++I IL + R+ + +QM + F +
Sbjct: 397 AMTAFTEMRQN--GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSL 454
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I G+ + L + NT++ + KE ++ A F +
Sbjct: 455 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH-IG 513
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
VK + S N L+D C + D ++ F M G PD +Y+ L+ G + R+ +A
Sbjct: 514 VKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDAL 573
Query: 207 HLLYSMF-------------------------------WRISQKGSGEDIVIYRTLLFAL 235
L MF ++ +G+ I Y T+L L
Sbjct: 574 ALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 633
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEAL 288
C+ + +A+++ E + +S+ +D+ N I+ AKSL + +
Sbjct: 634 CENSCVDEALRMFEDL--------RSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+RG +P + +YS M EG + E D + M G M + L + G V
Sbjct: 686 LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR 745
Query: 349 EA 350
A
Sbjct: 746 RA 747
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 8/383 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T I +AG+ +A+ LF ++ C ++ T++ + K + AA L ++
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGL-IKK 221
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + + L+D LC+ R + AL +F M +G P SY L++GLC+ R
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA+ +L M + DIV + L+ C +G + +A +L+ + G++ P
Sbjct: 282 WKEASAMLNEM----TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE-PNV 336
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + ++ A+ L + + RG P + SYS + RI E ++ +E
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P+ V Y + A + G + EA E+ ++ G ++P + Y++LL+G C G
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG-YLPDLCTYSVLLEGFCKQG 455
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + M + N Y IL+D +C+ G A ++ E+ + P V+ Y
Sbjct: 456 YLGKAFRLFRAM-QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIY 514
Query: 442 NVLIRGLCSIGKQYEAVMWLEEM 464
+I GLC G EA+ +M
Sbjct: 515 TTIINGLCKEGLLDEALEAFRKM 537
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 14/357 (3%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ I + L++ LC+ AL +F +M +GC PD +Y ++ GLC A
Sbjct: 157 LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ M + G D+V Y TL+ +LC + +A+ I + KG+ +
Sbjct: 217 GLIKKM----GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272
Query: 267 --DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMR 323
LC + ++ A +++NE +P + ++S + ID++ EG ++E VL M
Sbjct: 273 IQGLCSFSRWKE---ASAMLNEMTSLNIMPDIVTFSLL-IDIFCKEGNVLEAQGVLKTMT 328
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P+++ Y + + V EA ++ + + +G P V Y+IL+ G C
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGC-KPDVFSYSILINGYCMVKRI 387
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A +M Q G N +Y L+ C+ G+ EA + ++M Y P + TY+V
Sbjct: 388 DEAKQLFNEMIHQ-GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
L+ G C G +A M P++ +++ L+ S+ C + +LN RK +L
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM-CKSGNLNHARKLFSEL 502
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 168/397 (42%), Gaps = 21/397 (5%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+++A++ F ++ + FN LL +V+ + A I + + +L
Sbjct: 70 NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C + DL V ++ G P ++ L+ GLC +A L M
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R G D+ Y T++ LC G+ A +++K+ G + + C D
Sbjct: 190 R----GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD- 244
Query: 275 EDIEGAKSLINEAL-------IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L+NEAL +G P++ SY+++ L + R E +L+EM +
Sbjct: 245 -------RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI 297
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V + + K+G V EA V++ M + P V YN L+ G A
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKT-MTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
M + GC + +Y IL++G C R EA ++ EM+ + P +Y LI
Sbjct: 357 KLFDVMITR-GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C +GK EA ++M + LPD+ +S L+ C
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Query: 28 LKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
+K EAK+ + H G Y ++I + ++ E +E+ M +
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++ + + + G L +A LF+ + + L+ M K L A LF
Sbjct: 444 YSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLF-SEL 502
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ ++ +Q +++ LC+ D AL F++M+ GC P+ SY+++++G +
Sbjct: 503 FVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDE 562
Query: 203 NEATHLLYSM 212
+ A L+ M
Sbjct: 563 SRAVQLIGEM 572
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 210/493 (42%), Gaps = 67/493 (13%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV-SLFKNLSQFNCVN 113
L+ + + ++ + +M+ C + AI +ARAG + A+ + ++ C
Sbjct: 65 LAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAA 124
Query: 114 WT-QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
T + +N LL +++E+ L AA + + V+ + + NLL+ LCQ R A
Sbjct: 125 PTVRVYNHLLDALLREN-LVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF----------------WRI 216
+ EM +GC PD S+ ++ LC RL+EA +L M +R+
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRM 243
Query: 217 SQ----------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +G D V Y +++ A C +++ A IL +++ +G P + +
Sbjct: 244 REVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGC-VPNVQTFTV 302
Query: 267 DLCPCNDGEDIEGAKSLIN--------------EALIRG--------------------- 291
+ D + A + N LIRG
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
+P + +YS + G + + ++M G P++V+Y + L K M D+A
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAE 422
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+I++ M P +N L++ LCD G + A+ M ++ GC N TY L+
Sbjct: 423 NLIDK-MSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGM-RRYGCPPNDRTYNELLH 480
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
GL R+G +A R+L EML + + +YN I GLC + EA++ L MI Q P
Sbjct: 481 GLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQP 540
Query: 472 DISVWSSLVASVC 484
D +++++ + C
Sbjct: 541 DAFTFNAIIHAYC 553
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 177/408 (43%), Gaps = 45/408 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + Y S++G ++ + ++ +M + C F ++ + G++++A+
Sbjct: 259 RPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALG 318
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG-WEVKSRIQSLNLLMDV 160
++ + T S+N L++ + L+ A LF+ SC G + +++ + L+D
Sbjct: 319 MWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRA--LFVFSCMGKSDCLPDVRTYSTLIDG 376
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ D+A+ ++ +M GC P+ Y ++ LC ++A +L+ M S +
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKM----SLEN 432
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ + + TL+ +LCD G+ A+ + + R G CP ND
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYG-------------CPPND------- 472
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+Y+ + L+ EG + ++L EM GF SLV Y ++
Sbjct: 473 ----------------RTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISG 516
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + M+ EA+ ++ +++G P +N ++ C GN A L +M V C
Sbjct: 517 LCQMRMIKEAMILLGRMIIQG-IQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDA-VNCP 574
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
N Y L+ GLC + +A L +ML P T+NVL+RG+
Sbjct: 575 RNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 190/462 (41%), Gaps = 45/462 (9%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
S L L EA+ G Y +++ L R+ E+ V+D+M
Sbjct: 205 SALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVA 264
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRS 141
+ + + + +A +L A ++ + CV Q+F L+K + K+ A ++
Sbjct: 265 YTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMV 324
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
GW + S N+L+ LC AL VF M C PD +Y L+ G
Sbjct: 325 AEGWAPST--ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD 382
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A S++ ++ G ++V+Y ++ LC + A +++K+
Sbjct: 383 LDVAM----SIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKM---------- 428
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
++ CP P+ +++ + L + GR V
Sbjct: 429 ---SLENCP-----------------------PNTLTFNTLIRSLCDLGRAGRALNVFHG 462
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
MR G P+ Y L LF++G ++AL ++ E M+ F ++ YN + GLC
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE-MLNHGFELSLVSYNTTISGLCQMR 521
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A++ L +M Q G + T+ ++ C++G A+ +L M + + Y
Sbjct: 522 MIKEAMILLGRMIIQ-GIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAY 580
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L+ GLCS K +A+++L +M+ + P+ + W+ LV +
Sbjct: 581 TSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 193/453 (42%), Gaps = 20/453 (4%)
Query: 38 YPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYAR 92
Y N R G Y +I L +++R+ + ++D+M C + T I +
Sbjct: 150 YDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCK 209
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
+L+EA + ++ S+N ++ + + ++ L + ++
Sbjct: 210 LDRLDEARGILAEMTPVG-----ASYNAVVHALCGQFRMREV-FLVVDEMVHRGLRPDTV 263
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++ C+ R +A + M +GC P+ +++ +L+KG +D ++++A L
Sbjct: 264 AYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDA---LGMW 320
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
W +++ G + Y L+ LC G ++ A+ + + K P R + + +
Sbjct: 321 NWMVAE-GWAPSTISYNVLIRGLCHIGDLKRALFVFS-CMGKSDCLPDVRTYSTLIDGFS 378
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D++ A S+ N+ G P++ Y+ M L + + + ++D+M + P+ +
Sbjct: 379 KAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTL 438
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ + +L G AL V M + P R YN LL GL GN A+ L +
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHG-MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE 497
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M G + +Y + GLC+ EA +L M+I+ P T+N +I C G
Sbjct: 498 MLNH-GFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEG 556
Query: 453 KQYEAVMWLEEMISQAKLP-DISVWSSLVASVC 484
A W+ + P +I ++SL++ +C
Sbjct: 557 -NVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLC 588
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 189/427 (44%), Gaps = 50/427 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQ 152
L E + LF + Q + F+ +L ++ K + LF + C + +
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC---GIGHDLY 105
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N++++ LC+C R +AL V +M G PD + L+ G C R+ +A L+ M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D+VIY T++ C G + DA+++ +++ R G++A + + C
Sbjct: 166 ----EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLYNE----------- 309
G + A+ L+ + ++R +P++ +++A+ A+ LY E
Sbjct: 222 SGRWSDAAR-LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 310 ------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
GR+ E ++LD M TKG P +V Y + K VDE ++ E
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G T+ YN +++G AG A +M + N TY IL+ GLC +
Sbjct: 341 AQRGLVGDTI-TYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNW 395
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R +A + E M + TYN++I G+C IG +A + + PD+ ++
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 478 SLVASVC 484
++++ C
Sbjct: 456 TMISGFC 462
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 46/375 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +S+I + NR+ + +++ +M+ ++ T I + G +N+AV
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
LF + + ++N+L+ + + A L +R ++ + + ++DV
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL-MRDMVMRDIVPNVITFTAVIDV 253
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + A+ +++EM + PD +Y+ L+ GLC R++EA +L M KG
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV----TKG 309
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y TL+ C + R+D EG
Sbjct: 310 CLPDVVTYNTLINGFC-------------------------KSKRVD----------EGT 334
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L E RG + +Y+ + + GR ++ M ++ P++ Y L
Sbjct: 335 K-LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 390
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + V++AL V+ E M K + YNI++ G+C GN A + +S + G
Sbjct: 391 LCMNWRVEKAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLK 448
Query: 401 ANGETYGILVDGLCR 415
+ +Y ++ G CR
Sbjct: 449 PDVVSYTTMISGFCR 463
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T + + K+ A+K+++E + + + Y S+I L R+ E K
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEAK 299
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C + T I + ++ +++E LF+ ++Q V T ++NT+++
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + +AA +F R + + I++ ++L+ LC R + AL +F+ M D
Sbjct: 360 FQAGRPDAAQEIFSR----MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I++ G+C + +A + +F +S KG D+V Y T++ C + + +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDA----WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 246 QILEKILRKGL 256
+ K+ GL
Sbjct: 472 LLYRKMQEDGL 482
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
PS+V + L+ + K D + + V G + YNI++ LC +A+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG-IGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ KM K G + T L++G C+ R +A ++ +M + P V YN +I G
Sbjct: 126 VVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C IG +AV + M D ++SLVA +CC+
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 214/473 (45%), Gaps = 44/473 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L +S + + + V++QM + + I Y+ +G NE+V +FK +S
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRS-----------CYGWE------ 146
+ + N+ + + K + A +F L+ +G+
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240
Query: 147 ---------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+ N+L++ +C D A+ +F++M +G PD ++
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ LC RL++A H F + G +Y L+ C+ G++ A +++ ++
Sbjct: 301 VISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356
Query: 252 LRKGLKAPKSRRHR-IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ K + P + I C +G EG K +++ + G P++ +++++ G
Sbjct: 357 MNKDIPPPGVKYFSSIINNLCKEGRVAEG-KDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 415
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ E +LD M + G P+ +Y + K+G +D+AL V + + KG PT +Y
Sbjct: 416 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSVLY 474
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+I+L GL A + A +M + G + TYG+++ GLCR+ EA+ +LE++
Sbjct: 475 SIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 533
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + T+N++I + +G++ EA + + + +P+I +S ++ ++
Sbjct: 534 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 175/404 (43%), Gaps = 44/404 (10%)
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+L+ VK+ +++ AH LFL V +I N ++ LC+ + D A + Q+M
Sbjct: 53 SLIYGFVKDGEVDKAHCLFLE-MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 111
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD +Y +++ GLC + +++A +L M + G+ + + Y +L+ G
Sbjct: 112 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV----EAGTRPNSITYNSLIHGYSISG 167
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++++ +++ G+ + G E AK + + +++G P + SY
Sbjct: 168 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE-AKCIFDSMVLKGPKPDIISY 226
Query: 300 SAMA-----------IDLYNE--------------------------GRIVEGDKVLDEM 322
S M D++N G + + + ++M
Sbjct: 227 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 286
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ KG P V + +++L + G +D+AL MV P+ VY L++G C+ G
Sbjct: 287 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH-MVDIGVPPSEAVYGCLIQGCCNHGE 345
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + +M + + + +++ LC++GR E +++ M+ P V T+N
Sbjct: 346 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 405
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 406 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 449
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+D + R DL L + + G PD SY L+ G D +++A +
Sbjct: 14 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA----H 68
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F + ++G I+I +++ LC ++ A I++K++ G+ AP + + +
Sbjct: 69 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI-APDLFTYSLIIDG 127
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ ++ A+ ++ + + G P+ +Y+++ G E +V +M + G P+
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMY 389
+ + + ALFK G +EA + + ++KG P + Y+ +L G A +S +A V
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHN 246
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ + G N + IL++ R G +A + E+M + P T+ +I LC
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
IG+ +A+ M+ P +V+ L+ CCN +L ++ + ++
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG-CCNHGELVKAKELISEM 356
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKG-DSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
VY +I + + KE+I +M D F++ I + G++ E +
Sbjct: 332 VYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 391
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ Q +FN+L++ +E A L L + ++ L+D C+
Sbjct: 392 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL-LDAMASIGIEPNCYIYGTLVDGYCKNG 450
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D AL VF++M +G P Y I++ GL RR A MF + + G+ I
Sbjct: 451 RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK----KMFHEMIESGTTVSI 506
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC +A +LEK+ +K + + G E AK L +
Sbjct: 507 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE-AKELFD 565
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P++ +YS M +L E E D + + G
Sbjct: 566 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 606
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT+ YNIL+ + + + ++ K G + +Y L+ G +DG +A
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKN-GLGPDDFSYS-LIYGFVKDGEVDKAHC 69
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EM+ + P + N +I+ LC + + +A +++M+ PD+ +S ++ +C
Sbjct: 70 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129
Query: 485 CNTADLNVCRKTLEQL 500
+ A ++ + LEQ+
Sbjct: 130 KSKA-MDKAERVLEQM 144
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 213/471 (45%), Gaps = 40/471 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I L ++ + + + V++QM + + + I Y+ AG E+V +FK +
Sbjct: 194 TYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEM 253
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSCYGWE--- 146
S + + N+ + + + ++++ A +F L Y E
Sbjct: 254 SSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCF 313
Query: 147 --------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ + N+L++ +C D A+ +F++M +G PD ++ +
Sbjct: 314 ANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATV 373
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ LC RL++A H F + G +YR L+ C+ G++ A +++ +++
Sbjct: 374 ISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMM 429
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
K + P + + + K +++ + G P++ +++++ G +
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNM 489
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E +LD M + G P+ +Y + K+G +D+AL V + + KG PT +YNI
Sbjct: 490 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSVLYNI 548
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+L GL A + A +M + G + +TYG+++ GLCR+ EA+ +LE++
Sbjct: 549 ILHGLFQARRTTAAKKMFHEMIES-GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 607
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + T+N++I + +G++ EA + + +P + ++ +++++
Sbjct: 608 NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNL 658
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 184/405 (45%), Gaps = 17/405 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y R + A+++F L + S+NTL+ KE +++ A+ LF +
Sbjct: 129 IDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMI-EQS 187
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N L+D LC+ + + V ++M G P+ ++Y+ L+ G E+
Sbjct: 188 VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 247
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ F +S G +V + + ALC +I++A I + ++ KG K + I
Sbjct: 248 RV----FKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP-----NII 298
Query: 267 DLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDE 321
G EG SL+N + +G +P+ ++ + I+ Y G + + + ++
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNIL-INAYARCGMMDKAMLIFED 357
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ KG P V + +++L + G +D+AL MV P+ VY L++G C+ G
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKF-NHMVDIGVPPSEAVYRCLIQGCCNHG 416
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + +M + + + +++ L ++GR E +++ M+ P V T+
Sbjct: 417 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTF 476
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 477 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 521
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+D + R +LAL VF + G PD SY+ L+ G + +++A Y
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKA----Y 177
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F+++ ++ D+V Y +L+ LC ++ + ++LE+++ G++ P ++ + +
Sbjct: 178 ELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIR-PNNKTYNSLIYG 236
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ + + + E G IP + + ++ L RI E + D M KG P+
Sbjct: 237 YSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y L +G ++ + KG VP R +NIL+ G A++
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKG-IVPNHRFFNILINAYARCGMMDKAMLIF 355
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ M + G + + T+ ++ LCR GR +A M+ P Y LI+G C+
Sbjct: 356 EDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414
Query: 451 IGKQYEAVMWLEEMISQ-AKLPDISVWSSLV 480
G+ +A + EM+++ P + +SS++
Sbjct: 415 HGELVKAKELISEMMNKDIPPPGVKYFSSII 445
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 44/312 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++S+I L + R+ E K+++D M F + + Y G + EA +L ++
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 500
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ TL+ K +++ A +F R VK N+++ L Q RR+
Sbjct: 501 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVF-RDMLHKGVKPTSVLYNIILHGLFQARRT 559
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F EM G ++Y +++ GLC + +EA LL +F DI+
Sbjct: 560 TAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLF----AMNVKFDIIT 615
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ ++ A+ G+ Q+A ++ I GL
Sbjct: 616 FNIVISAMLKVGRRQEAKELFAAISTYGL------------------------------- 644
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+P++ +Y+ M +L E E D + + G P + + L K V
Sbjct: 645 -----VPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEV 699
Query: 348 DEA---LEVIEE 356
+A L +I+E
Sbjct: 700 AKASNYLSIIDE 711
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGE-----TYGILVDGLCRDGRFLEASRVLEEMLIR 432
C G A+AV K+M + A + TY IL+D R R A V +L
Sbjct: 93 CSDG-PALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT 151
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
P V +YN LI G G+ +A +MI Q+ PD+ ++SL+ + C T ++
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGL-CKTKEMVK 210
Query: 493 CRKTLEQL 500
+ LEQ+
Sbjct: 211 SERVLEQM 218
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 209/500 (41%), Gaps = 59/500 (11%)
Query: 32 KEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+EAK+ + + G V Y M+ S+ I E +++ +M + CE V +
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSC 142
I T +A +++EA +F + + ++NTLL + K K++ A LF + C
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ N L D LC+ LAL + +M GC PD +Y+ ++ GL + ++
Sbjct: 605 -----PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL---------- 252
EA + M +K D V TLL + I+DA +I+ L
Sbjct: 660 KEAMCFFHQM-----KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 253 -----------RKGLKAPKSRRHR-IDLCPCNDGE--------------DIEGAKSLINE 286
G+ S R + C DG+ ++ GA++L +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G+ P L +Y+ + L I V ++++ G P + Y L A K G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGE 404
+DE E+ +E T+ +NI++ GL AGN A+ +Y MS +
Sbjct: 835 KIDELFELYKEMSTHECEANTI-THNIVISGLVKAGNVDDALDLYYDLMSDR-DFSPTAC 892
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TYG L+DGL + GR EA ++ E ML P YN+LI G G+ A + M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + PD+ +S LV +C
Sbjct: 953 VKEGVRPDLKTYSVLVDCLC 972
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 195/478 (40%), Gaps = 44/478 (9%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + Y+S++ L + I + ++ +M+ + F IR RAG++NEA
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ K + C ++ L+ + KL+ A +F + G R+ + LL D
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL-DR 337
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
R D + EM+ G PD ++ IL+ LC EA L M +G
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM----RDQG 393
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP--------------------- 259
++ Y TL+ L ++ DA+++ + G+K
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 260 ------KSRRHRIDLCPCN--------DGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
K++ ++ CN G D E AK + G +P +Y+ M
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE-AKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G I E K+L EM G P +++ + + L+K VDEA ++ M + P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF-MRMKEMKLKP 571
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
TV YN LL GL G A+ + M Q GC N T+ L D LC++ A ++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L +M+ P V TYN +I GL G+ EA+ + +M + PD +L+ V
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGV 687
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 7/329 (2%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P Y +IG L E++ I ++V Q+K C + + + Y ++G+++E L+K
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+S C T + N ++ +VK ++ A L+ + + L+D L +
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R A +F+ M GC P+ Y+IL+ G + A ++F R+ ++G D+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC----ALFKRMVKEGVRPDL 961
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ LC G++ + + +++ GL P + + + +E A L N
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLN-PDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 286 EALI-RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E RG P L +Y+++ ++L G + E K+ +E++ G P++ + A +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
G + A V + MV G F P Y L
Sbjct: 1081 GKPEHAYAVY-QTMVTGGFSPNTGTYEQL 1108
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 160/394 (40%), Gaps = 15/394 (3%)
Query: 91 ARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
A AG ++ AVS + L + C + +++ K + + A LF + V+
Sbjct: 725 AEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ + NLL+ L + ++A VF ++ GC PD +Y+ L+ +++E L
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE----L 839
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+ ++ +S + + + ++ L G + DA+ + ++ +P + +
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG---- 895
Query: 270 PCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P DG G AK L L G P+ A Y+ + G + M +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P L Y + L G VDE L +E G P V YN+++ GL +
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG-LNPDVVCYNLIINGLGKSHRLEE 1014
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ +M G + TY L+ L G EA ++ E+ P V T+N LI
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
RG GK A + M++ P+ + L
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G + + SY+ + L E +V M +GF PSL Y + + L K +D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ +++E G P V + I ++ L AG A LK+M + GC + TY +L+
Sbjct: 243 MGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLI 300
Query: 411 DGLCRDGRFLEASRVLEEM--------------------------LIRSYW--------- 435
D LC + A V E+M ++ +W
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V T+ +L+ LC G EA L+ M Q LP++ +++L+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + L +G + + L +MR GF + Y + L K EA+EV
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+++G F P+++ Y+ L+ GL +VM L K + +G N T+ I + L R G
Sbjct: 215 ILEG-FRPSLQTYSSLMVGL-GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ EA +L+ M P V TY VLI LC+ K A E+M + PD +
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 478 SLV 480
+L+
Sbjct: 333 TLL 335
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 194/409 (47%), Gaps = 22/409 (5%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
A + + R L EA SL L V S+NT+L + + + A L
Sbjct: 49 AACLNRHLRLLPLGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSL 105
Query: 144 GWEVKSRIQ--SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
R S +LM LC R +D A+ + + M G D +Y L++GLC+
Sbjct: 106 EPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE 165
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+++A L+ M + G ++V+Y +LL C G+ +D ++ ++ KG++ P
Sbjct: 166 VDKAVELMGEM----CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIE-PDV 220
Query: 262 RRHR--ID-LCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDK 317
+ ID LC + G + + ++R G+ P++ +Y+ + + EG + E
Sbjct: 221 VMYTGLIDSLCKVGKAKKAHG----VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV--PTVRVYNILLK 375
VL +M KG P +V Y + L +DEA+ ++EE MV+G + P V +N +++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE-MVRGKNIVKPNVVTFNSVIQ 335
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLCD G A ++ M ++ GC+ N TY +L+ GL R + +A +++EM
Sbjct: 336 GLCDIGRMRQA-FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE 394
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY++LI+G C + + A L M + P++ + L+ ++C
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMC 443
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 203/452 (44%), Gaps = 29/452 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + + E++ +M E V+++ ++ Y ++G+ + +F +
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
S+ + L+ + K K + AH ++ + G E + + N+L++ +C+
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE--PNVVTYNVLINCMCKEG 269
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A+ V ++M +G PD +Y+ L+KGL + ++EA LL M + ++
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR--GKNIVKPNV 327
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKG----------LKAPKSRRHRIDLCPCNDGE 275
V + +++ LCD G+++ A Q+ + G L R H++
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV--------- 378
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A L++E G P +YS + ++ + +L MR +G P L Y
Sbjct: 379 --RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
L A+ + GM++ A + E + F V Y+ ++ G C AG+ A LK +
Sbjct: 437 PLLVAMCEQGMMERARNLFNE--MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + TY I+++ + G A+ VL++M + P V ++ LI+G + G+
Sbjct: 495 E-GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+ + + EMI++ D + S+L S+ +
Sbjct: 554 KVLELIREMITKNIALDSKIISTLSTSLVASN 585
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 192/451 (42%), Gaps = 19/451 (4%)
Query: 36 EKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ 95
E +P R N Y ++ L + ++ M+ + T IR A +
Sbjct: 106 EPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE 165
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++AV L + + +++LL+ K + E +F+ ++ +
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG-IEPDVVMYT 224
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+D LC+ ++ A V M +G P+ +Y++L+ +C + + EA +L M
Sbjct: 225 GLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM--- 281
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKSRRHRI---DLCPC 271
S+KG D+V Y TL+ L D ++ +AM +LE+++R K + P LC
Sbjct: 282 -SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI 340
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
++++ E G + +L +Y+ + L ++ + +++DEM + G P
Sbjct: 341 GRMRQAFQVRAMMEET---GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y + K VD A +++ +G P + Y LL +C+ G A
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRG-IEPELFHYIPLLVAMCEQGMMERARNLFN 456
Query: 392 KMSKQ--VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+M + VA Y ++ G C+ G A +L+ ++ P TY+++I
Sbjct: 457 EMDNNFPLDVVA----YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G A L++M + LPD++V+ SL+
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 154/371 (41%), Gaps = 50/371 (13%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
K+F E EK + +Y +I L + + + V+D M E + I
Sbjct: 206 KVFVEMSEK--GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLIN 263
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK----------------EMVKESKLE 132
+ G + EA+ + K +S+ ++NTL+K EMV+ +
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIV 323
Query: 133 AAHILFLRSCY-----------GWEVKSRIQ---------SLNLLMDVLCQCRRSDLALH 172
+++ S ++V++ ++ + NLL+ L + + A+
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ EM G PD +Y IL+KG C +++ A LL +M +G ++ Y LL
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM----RDRGIEPELFHYIPLL 439
Query: 233 FALCDQGKIQDAMQILEKI---LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
A+C+QG ++ A + ++ + A + H C G D++ AK L+ +
Sbjct: 440 VAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIH----GACKAG-DLKTAKELLKSIVD 494
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P +YS + G + + VL +M GF P + ++++ + G +++
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554
Query: 350 ALEVIEEEMVK 360
LE+I E + K
Sbjct: 555 VLELIREMITK 565
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 169/374 (45%), Gaps = 47/374 (12%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ + +++D+M+ + + I + G+L+EA+ N+ + C + N
Sbjct: 98 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+L+ M + A L L + + N+L++ LC+ A+ + ++M
Sbjct: 158 ILRSMCSTGRWMDAEKL-LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 216
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P+ SY+ L+ G C +++++ A L M R G DIV Y TLL ALC GK
Sbjct: 217 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR----GCYPDIVTYNTLLTALCKDGK 272
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A++IL N+ +G P L +Y+
Sbjct: 273 VDVAVEIL------------------------------------NQLSSKGCSPVLITYN 296
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L G+ K+LDEMR KG P ++ Y + ++ L ++G VDEA++ + ++
Sbjct: 297 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD--LE 354
Query: 361 GTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGR 418
G + P YN ++ GLC + + A+ +L M SK+ C TY IL++G+ +G
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR--CKPTEATYTILIEGIAYEGL 412
Query: 419 FLEASRVLEEMLIR 432
EA +L E+ R
Sbjct: 413 AKEALDLLNELCSR 426
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 161/326 (49%), Gaps = 9/326 (2%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
V C+ S + A+ + EM +G PD +Y++L+ G+C + RL+EA L +M
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM----P 144
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G +++ + +L ++C G+ DA ++L +LRKG + + C G +
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL-L 203
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A ++ + + G P+ SY+ + E ++ + LD M ++G +P +V Y
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L AL KDG VD A+E++ + KG P + YN ++ GL G + A+ L +M ++
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGC-SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK- 321
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + TY LV GL R+G+ EA + ++ P TYN ++ GLC + A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381
Query: 458 VMWLEEMISQAKLPDISVWSSLVASV 483
+ +L MIS+ P + ++ L+ +
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGI 407
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 7/321 (2%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + + N+L++ +C+ R D A+ M GC P+ +++I+++ +C+ R +A
Sbjct: 114 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 173
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL M +KG +V + L+ LC QG + A+ ILEK+ G P S +
Sbjct: 174 LLSDML----RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC-TPNSLSYNPL 228
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L + ++ A ++ + RG P + +Y+ + L +G++ ++L+++ +KG
Sbjct: 229 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 288
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P L+ Y + L K G + A+++++E KG P + Y+ L+ GL G A+
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG-LKPDIITYSSLVSGLSREGKVDEAI 347
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ + + +G N TY ++ GLC+ + A L M+ + P TY +LI G
Sbjct: 348 KFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406
Query: 448 LCSIGKQYEAVMWLEEMISQA 468
+ G EA+ L E+ S+
Sbjct: 407 IAYEGLAKEALDLLNELCSRG 427
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
+ ++ C + + +A LL M KGS D+V Y L+ +C +G++ +A++ L
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEM----RNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 249 EKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ G + P H I L C+ G ++ A+ L+++ L +G PS+ +++ + L
Sbjct: 141 NNMPSYGCQ-PNVITHNIILRSMCSTGRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLC 198
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+G + +L++M G P+ + Y L K+ +D A+E ++ + +G + P +
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY-PDI 257
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN LL LC G VAV L ++S + GC TY ++DGL + G+ A ++L+
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM + P + TY+ L+ GL GK EA+ + ++ P+ ++S++ +C
Sbjct: 317 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 373
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
SL+ +S E + + K+LDEMR KG P +V Y + + K+G +DEA++ +
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
G P V +NI+L+ +C G A L M ++ GC + T+ IL++ LC
Sbjct: 141 NNMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLC 198
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R G A +LE+M + P +YN L+ G C K A+ +L+ M+S+ PDI
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258
Query: 475 VWSSLVASVCCNTADLNVCRKTLEQLSS 502
+++L+ ++ C ++V + L QLSS
Sbjct: 259 TYNTLLTAL-CKDGKVDVAVEILNQLSS 285
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I ++ G+ A+ L +
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++++L+ + +E K++ A I F G ++ + N +M LC+ R+
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEA-IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+D A+ M + C P +Y IL++G+ + EA LL + R + +K S E +
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 437
Query: 226 V 226
Sbjct: 438 A 438
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 204/437 (46%), Gaps = 37/437 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I L ++ + E + + +M C + I Y +A + +A++
Sbjct: 63 NAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFL 121
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLC 162
+ + + +++++++ K + A +F G E I + N+L+ L
Sbjct: 122 REMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE--PDIVNFNVLLSGLW 179
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R+ A +F+ M+ +GC PD +Y+ ++ GLC ++L+EA LL R+ Q+
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE----RMKQEDVS 235
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED-----I 277
V Y TL+ LC ++Q A ++ EK+ + P CPC + I
Sbjct: 236 PTFVTYTTLIDHLCKFARLQQAYEVFEKM----AEGP---------CPCTEPAYSVLILI 282
Query: 278 EG---------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
G AK + E RG P++ +Y+ + L + ++ + ++ M +
Sbjct: 283 NGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA 342
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ YE +++L K V+EA +++ KG FVP+++++ +LL L AG A
Sbjct: 343 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDKG-FVPSLKIWEVLLSRLARAGRLDDAFE 401
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
K+MS+ + C + IL+DG+ R G EA L++M P TY+ L+ GL
Sbjct: 402 LYKEMSR-INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460
Query: 449 CSIGKQYEAVMWLEEMI 465
C GK +A +EE++
Sbjct: 461 CWQGKADQARKLVEELV 477
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 8/305 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G +P+ Y+ L+ LC L EA L M + ++V Y ++ C
Sbjct: 59 GLFPNAILYNNLISCLCKAGMLAEAESYLKRM-----PQHCAPNVVSYNIIIDGYCKARN 113
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
I+ A+ L ++ G I C G ++ A + E +G P + +++
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTG-NVSKAMDVFAEMPAKGCEPDIVNFN 172
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L+ +I E ++ M ++G P +V Y +A L K +DEA+ ++E M +
Sbjct: 173 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLER-MKQ 231
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK-QVGCVANGETYGILVDGLCRDGRF 419
PT Y L+ LC A +KM++ C + IL++GLC+ R
Sbjct: 232 EDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRP 291
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA + +EM R P V TYN L+ GL S K +A+ M+ Q P++ + L
Sbjct: 292 GEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEIL 351
Query: 480 VASVC 484
++S+C
Sbjct: 352 ISSLC 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 9/304 (2%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Q C P+ SY+I++ G C R + +A L M + G Y +++ + C G
Sbjct: 92 QHCAPNVVSYNIIIDGYCKARNIEKALAFLREM----EELGHPPTPHAYSSIVQSFCKTG 147
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ AM + ++ KG + P + L I A+ L RG P + +Y
Sbjct: 148 NVSKAMDVFAEMPAKGCE-PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 206
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M L ++ E +L+ M+ + P+ V Y + L K + +A EV E+ M
Sbjct: 207 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEK-MA 265
Query: 360 KGTFVPTVRVYN--ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G T Y+ IL+ GLC A A ++M + G TY L++GL
Sbjct: 266 EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGR-GISPTVVTYNTLLEGLLSTA 324
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ +A + ML + P + TY +LI LC + EA L M + +P + +W
Sbjct: 325 KLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 384
Query: 478 SLVA 481
L++
Sbjct: 385 VLLS 388
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A++++ E G P + S+ + + G G LD M G +P+ ++Y
Sbjct: 10 VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
++ L K GM+ EA ++ + P V YNI++ G C A N A+ +L++M ++
Sbjct: 70 LISCLCKAGMLAEAESYLKR--MPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM-EE 126
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+G Y +V C+ G +A V EM + P + +NVL+ GL K +E
Sbjct: 127 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 186
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A M S+ PD+ +++++A +C
Sbjct: 187 ARELFRSMNSRGCKPDVVTYNTMIAGLC 214
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 46 PVYASMIGI--LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL- 102
P Y+ +I I L ++ R E KE+ +M+G + T + +L +A+ L
Sbjct: 274 PAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 333
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL--------FLRSCYGWEVKSRIQSL 154
+ L Q N ++ L+ + K ++E A L F+ S WEV
Sbjct: 334 YFMLDQVPAPNMF-TYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV------- 385
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
L+ L + R D A +++EM C S +IL+ G+ ++EA L M
Sbjct: 386 --LLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQM-- 441
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ G D Y L+ LC QGK A +++E+++R G
Sbjct: 442 --TDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 208/497 (41%), Gaps = 45/497 (9%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL ++++ A ++ +G V +++G L + ++ +++G CE + +
Sbjct: 97 PLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELV 156
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ ++ R G A +F + + T +N L+ V+ ++ A++ F +
Sbjct: 157 CALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPA 216
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
R +L+ V CRR D A+ + ++M+ +G P+ +Y +L+ G CN R
Sbjct: 217 DGCRPDRFTYNSLVHGV---CRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGR 273
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ EA + M ++ +KG YRTL+ + + A ++L L S
Sbjct: 274 VEEA----FRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 329
Query: 262 RRHRIDLCPCNDG---EDIEGAK-------------------------------SLINEA 287
H + C E +E AK L++
Sbjct: 330 ACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSF 389
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ GG P Y + L N + + L M KG S++ Y + K G V
Sbjct: 390 IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 449
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A E+++E KG F+P + +N L+ G GN A + LK + + G + + T+
Sbjct: 450 DKAEEIVKEMQDKG-FLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH-GFMPDIITFT 507
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DGLC + +A EEM P +TYNVL+ LCS G +A+ L +M
Sbjct: 508 SLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID 567
Query: 468 AKLPDISVWSSLVASVC 484
PD +++L+ S C
Sbjct: 568 GVTPDAYSFNALILSFC 584
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 65/330 (19%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S NC N++++ N L MV + L S + S N+++D +
Sbjct: 407 SLLNCKNFSKA-NHYLGHMVLKGLL-----------------SSVMSYNMVIDCFVKAGA 448
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + +EM +G P+ +++ L+ G ++ A +L + + G DI+
Sbjct: 449 VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLM----EHGFMPDII 504
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ LC+ ++ DA E++ G++
Sbjct: 505 TFTSLIDGLCNTHQLDDAFVCFEEMAEWGVR----------------------------- 535
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ +Y+ + L + G + + +L++M+ G P + A + + +
Sbjct: 536 -------PNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRK 588
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGC-VANG 403
VD+A E I +MV+ VP YN L+K LCD N A +++ ++ S GC +N
Sbjct: 589 VDKA-EDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERS---GCSTSNN 644
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
++Y +V L + G+F EA ++++ L R+
Sbjct: 645 QSYWPIVAALAKMGQFSEAGELMDKYLSRN 674
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 39/246 (15%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I ++ + + +E++ +M+ F T I Y++ G ++ A + K L
Sbjct: 436 YNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLM 495
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC--- 164
+ + +F +L+ + +L+ A + F W V+ Q+ N+LM LC
Sbjct: 496 EHGFMPDIITFTSLIDGLCNTHQLDDAFVCF-EEMAEWGVRPNAQTYNVLMHTLCSAGHV 554
Query: 165 --------------------------------RRSDLALHVFQEMDFQGCYPDRESYHIL 192
R+ D A +F +M G PD +Y+ L
Sbjct: 555 NKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSL 614
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+K LC++RR+N+A +L F R S + Y ++ AL G+ +A ++++K L
Sbjct: 615 IKALCDERRVNKAKEIL---FARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYL 671
Query: 253 RKGLKA 258
+ ++
Sbjct: 672 SRNAQS 677
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 40/361 (11%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D A + M+ +G Y++LM GLC + R+ EA + M G
Sbjct: 209 CESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV----NIGV 264
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V YRTL++ C +++ A++I ++R G P + E +E A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF-VPSEANCSFMIDELRKKELVEEAF 323
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL + G +P++ +Y+A+ L R + D++ EM +G P+ V Y + AL
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383
Query: 342 FKDGMVDEALEVIEE----------------------------------EMVKGTFVPTV 367
K GM+++AL + ++ MVK PT
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC G+ + A+ ++M+++ G N T+ L++G C+D + EA+R+ +
Sbjct: 444 ASYSPLIAGLCRNGDLSSAMELHREMAER-GIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M+ + P T+NV+I G C +G +A ++M+ PD + SL++ +C +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 488 A 488
Sbjct: 563 G 563
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 202/481 (41%), Gaps = 49/481 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ R + + +M G E + +A I + G + +A+ LF +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+N+L+ K+ L+ A L L + S + L+ LC R
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGL-LSGMVKEGLTPTAASYSPLIAGLC--RNG 457
Query: 168 DL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
DL A+ + +EM +G + ++ L+ G C D++++EA L F ++ +
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL----FDKMIDSNVIPNE 513
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + ++ C G I+ A Q+ ++++ GLK P + +R + + A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK-PDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM----------------------- 322
+ + + S +A+ L+ EGR E + DEM
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632
Query: 323 ------------RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +G P + Y + AL K+ + +AL ++ ++ G + P +
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDG-YSPNTVTH 691
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ LC +G A + K+M + N TY +D +G +E ++ L +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAG-NVLPNKFTYNCFLDYFATEGD-MEKAKDLHSAM 749
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
++ + + ++N+LI+GLC GK EA+ + ++ PD +S+++ + C D+
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL-CKMGDI 808
Query: 491 N 491
N
Sbjct: 809 N 809
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 196/491 (39%), Gaps = 82/491 (16%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ D+M + V+ IR Y + L+ A L + +N L+
Sbjct: 183 RDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG 242
Query: 125 MVKESKLEAA---------------HILFLRSCYGWEVKSRIQSLNLLMDV--------- 160
+ K +++ A + + YG+ R++ L + + +
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF---CRMEELEMALRITHDMIRLGF 299
Query: 161 ----------LCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + R+ +L F ++ G P+ +Y+ L+ LC + R ++A
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L F ++ +G + V Y L+ ALC +G I+DA+ + +K+ KG+K + +
Sbjct: 360 L----FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G ++ A+ L++ + G P+ ASYS + L G + ++ EM +G
Sbjct: 416 NGYCKQGS-LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGI 474
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ + A + KD +DEA + ++M+ +P +N++++G C GN A
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLF-DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLC--------------------------------- 414
+M ++G + TY L+ GLC
Sbjct: 534 QLYDQMV-EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592
Query: 415 --RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R+GRF E + +EM +R + ++ +++ + ++ + EM Q PD
Sbjct: 593 LFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 473 ISVWSSLVASV 483
++ ++ ++
Sbjct: 653 DIFYTCMIDAL 663
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 217/515 (42%), Gaps = 50/515 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK------YPNYRHNGPVYASMIGILSESN 59
P +T L + K+ AL +F + ++K YP Y S+I +
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP--------YNSLINGYCKQG 422
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ + ++ M + + ++ I R G L+ A+ L + +++ +F
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFT 482
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+ K+ K++ A LF + + + + + N++++ C A ++ +M
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVE 541
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEA-------------------THLLYSMF------- 213
G PD +Y L+ GLC +++A T LLY +F
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTE 601
Query: 214 ----W-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
W ++ +G D+V + +++A Q + + + ++ +G+K P + +
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK-PDDIFYTCMI 660
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+ E++ A + ++ +I G P+ +++ + +L G + + + EM
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ Y L +G +++A + + M++G V +NIL+KGLC AG A+
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVS-FNILIKGLCKAGKIQEAID 778
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++K+++ G + +Y ++ LC+ G +A + EML + P V YN+ IR
Sbjct: 779 LMRKITES-GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G+ +A+ MI P+ + +L++ +
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 134/326 (41%), Gaps = 42/326 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L + R+ LA +F +M G + D Y ++ C R L+ A L+ R+ +G
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVV----RMESEG 228
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y L++ LC ++Q+A+++ ++ G+ A + + C E++E A
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR-MEELEMA 287
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ ++ + G +PS A+ S M +DE+R K KL
Sbjct: 288 LRITHDMIRLGFVPSEANCSFM----------------IDELRKKELVEEAFSLACKLGD 331
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L GMV P V YN L+ LC A K+M+ + G
Sbjct: 332 L---GMV-----------------PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLE 370
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LC+ G +A + ++M + V YN LI G C G A
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
L M+ + P + +S L+A +C N
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRN 456
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 214/474 (45%), Gaps = 44/474 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L +S + + + V++QM + + I Y+ +G NE+V +FK +
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 321
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRS-----------CYGWE----- 146
S + + N+ + + K + A +F L+ +G+
Sbjct: 322 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381
Query: 147 ----------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ N+L++ +C D A+ +F++M +G PD ++
Sbjct: 382 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ LC RL++A H F + G +Y L+ C+ G++ A +++ +
Sbjct: 442 TVISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497
Query: 251 ILRKGLKAPKSRRHR-IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ K + P + I C +G EG K +++ + G P++ +++++
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEG-KDIMDMMVQTGQRPNVVTFNSLMEGYCLV 556
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + E +LD M + G P+ +Y + K+G +D+AL V + + KG PT +
Sbjct: 557 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSVL 615
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+I+L GL A + A +M + G + TYG+++ GLCR+ EA+ +LE++
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + T+N++I + +G++ EA + + + +P+I +S ++ ++
Sbjct: 675 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 728
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPV---YASMIGILSESNRITEMKEVIDQMKGDSCECK 79
+P A+++FK +++ RH+ P Y +I +R ++ ++ +
Sbjct: 132 APALAIELFKRM-DRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD 190
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
D ++ I + + G++++A LF + + + N+++KE+ K +++ A + +
Sbjct: 191 DFSYSL-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI-V 248
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + + +L++D LC+ + D A V ++M G P+ +Y+ L+ G
Sbjct: 249 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 308
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
NE+ + F ++S G + + + AL G+ +A I + ++ KG K P
Sbjct: 309 GMWNESVRV----FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK-P 363
Query: 260 KSRRHRIDLCPCNDGED--IEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGD 316
+ L D + ++ N L +G P+ ++ + I+ Y G + +
Sbjct: 364 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL-INAYARCGMMDKAM 422
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ ++M+ KG P V + +++L + G +D+AL MV P+ VY L++G
Sbjct: 423 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH-MVDIGVPPSEAVYGCLIQG 481
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C+ G A + +M + + + +++ LC++GR E +++ M+ P
Sbjct: 482 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 541
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V T+N L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 542 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 591
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
VY +I + + KE+I +M D F++ I + G++ E +
Sbjct: 474 VYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 533
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ Q +FN+L++ +E A L L + ++ L+D C+
Sbjct: 534 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL-LDAMASIGIEPNCYIYGTLVDGYCKNG 592
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D AL VF++M +G P Y I++ GL RR A MF + + G+ I
Sbjct: 593 RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK----KMFHEMIESGTTVSI 648
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC +A +LEK+ +K + + G E AK L +
Sbjct: 649 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE-AKELFD 707
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P++ +YS M +L E E D + + G
Sbjct: 708 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 748
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT+ YNIL+ + + + ++ K G + +Y L+ G +DG +A
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKN-GLGPDDFSYS-LIYGFVKDGEVDKAHC 211
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EM+ + P + N +I+ LC + + +A +++M+ PD+ +S ++ +C
Sbjct: 212 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 271
Query: 485 CNTADLNVCRKTLEQL 500
+ A ++ + LEQ+
Sbjct: 272 KSKA-MDKAERVLEQM 286
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 22/415 (5%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ +M +C A R G+ ++A L K + + V T +++ ++
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +K+E A +LF + V + + +L+D C+ + A +F+EM GC P
Sbjct: 298 LCHATKVEKAFLLF-QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y L+ +++ +A +F R+ G + V Y L+ LC G I A
Sbjct: 357 TVVTYTALIHAYLKAKQVPQAN----DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 245 MQILEKILRKGLKA------PKSRRHRIDLCPCNDGEDIEG---------AKSLINEALI 289
++ K++ A P RH + G ++G A L++ L
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ Y A+ G+I +V +M G+ PS+ Y + + +FKDG +D
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A++V+ + M+K + P V Y ++ GLC G S A+ L M ++ GC N TY L
Sbjct: 533 AMKVLSQ-MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK-GCSPNVVTYTAL 590
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+DGL + G+ + + +M + P TY VLI LC+ G +A + L EM
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 198/458 (43%), Gaps = 28/458 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + ++ K +I+ M + C S+F + + +Y A L
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-RSCYGWEVKSR--IQSLNL--LM 158
++ C +N + + + KL + +L L YG + + + +N+
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC + D A + +EM +G PD +Y ++ LC+ ++ +A + +F +
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA----FLLFQEMKM 316
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D+ Y L+ + C G I+ A + E++ G +P + + + +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTALIHAYLKAKQVP 375
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM------RTKGFW---- 328
A + + + G P+ +Y A+ L G I + +V ++ F+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435
Query: 329 ------PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P++V Y A + L K VD A E+++ + G P VY+ L+ G C AG
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPNHIVYDALIDGFCKAGK 494
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A +M+K G + + TY L+D + +DGR A +VL +ML S P V TY
Sbjct: 495 IDSAQEVFLQMTK-CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+I GLC IG+ +A+ L M + P++ +++L+
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 67/448 (14%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D+V T I A +EA+S + +C+ ++ TLL +K+ +L
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL------- 158
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
GW C+R + M +GC P+ ++ L+ CN
Sbjct: 159 -----GW------------------CKR------IINMMMTEGCNPNPSLFNSLVHSYCN 189
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI--QDAMQILEKILRKGL 256
++ A Y + R++ G V+Y + ++C Q K+ D + + EKI + L
Sbjct: 190 EKDYAYA----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245
Query: 257 KA----PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
A K C C G+ + A LI E + +G +P ++YS + L + ++
Sbjct: 246 AANCVLNKVNVANFARCLCGVGK-FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 304
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ + EM+ G P + Y + + K G++++A + EE G PTV Y
Sbjct: 305 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTA 363
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ A A +M GC N TYG LVDGLC+ G +A V +++
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422
Query: 433 S-------YWPC---------VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
S Y+PC V TY L+ GLC K A L+ M+S P+ V+
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482
Query: 477 SSLVASVCCNTADLNVCRKTLEQLSSCS 504
+L+ C ++ ++ Q++ C
Sbjct: 483 DALIDGF-CKAGKIDSAQEVFLQMTKCG 509
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 207/509 (40%), Gaps = 69/509 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K + + Y+ +I L + ++ + + +MK +
Sbjct: 272 AFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SC 142
I ++ +AG + +A LF+ + C ++ L+ +K ++ A+ +F R C
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM----------------DFQGCYPDR 186
+V + L+D LC+ A V+ ++ D P+
Sbjct: 390 RPNDV-----TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ GLC +++ A LL +M G + ++Y L+ C GKI A +
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAML----SSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 247 ILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ + G L + + ID DG ++ A ++++ L P++ +Y+AM
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRM-FKDGR-LDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G + K+L M KG P++V Y A + L K G +D +L++ + KG P
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SP 617
Query: 366 TVRVYNILLKGLCDAG--------------------------------NSAVAVMYLKKM 393
Y +L+ LC AG S +A + + +
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 677
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--IRSYWPCVETYNVLIRGLCSI 451
+ G V YG+L+D + GR A + +EM+ S + Y LI+ LC
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ EA EM + +P++SV+ L+
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLI 766
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 190/464 (40%), Gaps = 61/464 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ I + + + ++M+ C + I Y +A Q+ +A +F +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR---------SCYGWEVKSR------I 151
C ++ L+ + K + A ++ + S + + + R +
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D LC+ + D A + M GC P+ Y L+ G C +++ A +
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV--- 501
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK--SRRHRID-L 268
F ++++ G + Y +L+ + G++ AM++L ++L+ P + ID L
Sbjct: 502 -FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC-TPNVVTYTAMIDGL 559
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C + E SL+ E +G P++ +Y+A+ L G+I + +M KG
Sbjct: 560 CRIGESEKALKLLSLMEE---KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 616
Query: 329 PSLVMYEAKLAALFKDGMVDEA---------------------------------LEVIE 355
P+ V Y + L G++D+A L ++E
Sbjct: 617 PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILE 676
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETYGILVDGLC 414
E GT VP VY +L+ AG +A+ K+M + V + + Y L+ LC
Sbjct: 677 EMESYGT-VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALC 735
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ EA R+ EM R + P + + LI+GL + K EA+
Sbjct: 736 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 141/366 (38%), Gaps = 37/366 (10%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA------- 205
+ N L+ VL + DL V +EM G DR + LC + R +A
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101
Query: 206 ---------THLL------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
TH++ S R+ ++V YRTLL + ++
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 161
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+I+ ++ +G S + + CN+ +D A L+N G P Y+
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNE-KDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220
Query: 305 DLYNEGRIVEGD------KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ + ++ D K+ EM + V L G D+A ++I+E M
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG FVP Y+ ++ LC A A + ++M K VG + TY IL+D C+ G
Sbjct: 281 RKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGL 338
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A + EEM P V TY LI + +A M+ P+ + +
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 479 LVASVC 484
LV +C
Sbjct: 399 LVDGLC 404
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +Y+A+ L + G++ G +V EM GF AL K+G +AL++
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
IE E K + TV + ++ GL +A A+ +L +M + C+ N TY L+ G
Sbjct: 98 IEREDFK---LDTVLCTH-MISGLMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGF 152
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+ + R++ M+ P +N L+ C+ A L M + P
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212
Query: 474 SVWSSLVASVC 484
V++ + S+C
Sbjct: 213 VVYNIFIGSIC 223
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 22/415 (5%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ +M +C A R G+ ++A L K + + V T +++ ++
Sbjct: 173 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 232
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +K+E A +LF + V + + +L+D C+ + A +F+EM GC P
Sbjct: 233 LCHATKVEKAFLLF-QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y L+ +++ +A +F R+ G + V Y L+ LC G I A
Sbjct: 292 TVVTYTALIHAYLKAKQVPQAN----DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Query: 245 MQILEKILRKGLKA------PKSRRHRIDLCPCNDGEDIEG---------AKSLINEALI 289
++ K++ A P RH + G ++G A L++ L
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ Y A+ G+I +V +M G+ PS+ Y + + +FKDG +D
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A++V+ + M+K + P V Y ++ GLC G S A+ L M ++ GC N TY L
Sbjct: 468 AMKVLSQ-MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK-GCSPNVVTYTAL 525
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+DGL + G+ + + +M + P TY VLI LC+ G +A + L EM
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 198/458 (43%), Gaps = 28/458 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + ++ K +I+ M + C S+F + + +Y A L
Sbjct: 76 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 135
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-RSCYGWEVKSR--IQSLNL--LM 158
++ C +N + + + KL + +L L YG + + + +N+
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC + D A + +EM +G PD +Y ++ LC+ ++ +A + +F +
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA----FLLFQEMKM 251
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G D+ Y L+ + C G I+ A + E++ G +P + + + +
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTALIHAYLKAKQVP 310
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM------RTKGFW---- 328
A + + + G P+ +Y A+ L G I + +V ++ F+
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370
Query: 329 ------PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P++V Y A + L K VD A E+++ + G P VY+ L+ G C AG
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC-EPNHIVYDALIDGFCKAGK 429
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A +M+K G + + TY L+D + +DGR A +VL +ML S P V TY
Sbjct: 430 IDSAQEVFLQMTK-CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 488
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+I GLC IG+ +A+ L M + P++ +++L+
Sbjct: 489 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 67/448 (14%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D+V T I A +EA+S + +C+ ++ TLL +K+ +L
Sbjct: 41 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL------- 93
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
GW C+R + M +GC P+ ++ L+ CN
Sbjct: 94 -----GW------------------CKR------IINMMMTEGCNPNPSLFNSLVHSYCN 124
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI--QDAMQILEKILRKGL 256
++ A Y + R++ G V+Y + ++C Q K+ D + + EKI + L
Sbjct: 125 EKDYAYA----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180
Query: 257 KA----PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
A K C C G+ + A LI E + +G +P ++YS + L + ++
Sbjct: 181 AANCVLNKVNVANFARCLCGVGK-FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ + EM+ G P + Y + + K G++++A + EE G PTV Y
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC-SPTVVTYTA 298
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ A A +M GC N TYG LVDGLC+ G +A V +++
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357
Query: 433 S-------YWPC---------VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
S Y+PC V TY L+ GLC K A L+ M+S P+ V+
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417
Query: 477 SSLVASVCCNTADLNVCRKTLEQLSSCS 504
+L+ C ++ ++ Q++ C
Sbjct: 418 DALIDGF-CKAGKIDSAQEVFLQMTKCG 444
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 207/509 (40%), Gaps = 69/509 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ KE K + + Y+ +I L + ++ + + +MK +
Sbjct: 207 AFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 264
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SC 142
I ++ +AG + +A LF+ + C ++ L+ +K ++ A+ +F R C
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM----------------DFQGCYPDR 186
+V + L+D LC+ A V+ ++ D P+
Sbjct: 325 RPNDV-----TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ GLC +++ A LL +M G + ++Y L+ C GKI A +
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAML----SSGCEPNHIVYDALIDGFCKAGKIDSAQE 435
Query: 247 ILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ + G L + + ID DG ++ A ++++ L P++ +Y+AM
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRM-FKDGR-LDLAMKVLSQMLKDSCTPNVVTYTAMIDG 493
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G + K+L M KG P++V Y A + L K G +D +L++ + KG P
Sbjct: 494 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC-SP 552
Query: 366 TVRVYNILLKGLCDAG--------------------------------NSAVAVMYLKKM 393
Y +L+ LC AG S +A + + +
Sbjct: 553 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 612
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML--IRSYWPCVETYNVLIRGLCSI 451
+ G V YG+L+D + GR A + +EM+ S + Y LI+ LC
Sbjct: 613 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 672
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ EA EM + +P++SV+ L+
Sbjct: 673 SQVEEAFRLYSEMTRRGFVPELSVFVCLI 701
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 190/464 (40%), Gaps = 61/464 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ I + + + ++M+ C + I Y +A Q+ +A +F +
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR---------SCYGWEVKSR------I 151
C ++ L+ + K + A ++ + S + + + R +
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D LC+ + D A + M GC P+ Y L+ G C +++ A +
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV--- 436
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK--SRRHRID-L 268
F ++++ G + Y +L+ + G++ AM++L ++L+ P + ID L
Sbjct: 437 -FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC-TPNVVTYTAMIDGL 494
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C + E SL+ E +G P++ +Y+A+ L G+I + +M KG
Sbjct: 495 CRIGESEKALKLLSLMEE---KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 551
Query: 329 PSLVMYEAKLAALFKDGMVDEA---------------------------------LEVIE 355
P+ V Y + L G++D+A L ++E
Sbjct: 552 PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILE 611
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETYGILVDGLC 414
E GT VP VY +L+ AG +A+ K+M + V + + Y L+ LC
Sbjct: 612 EMESYGT-VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALC 670
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ EA R+ EM R + P + + LI+GL + K EA+
Sbjct: 671 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 122/341 (35%), Gaps = 74/341 (21%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK-----------ILRKGLKAPKS--- 261
+S+ G D ALC +G+ DA+ ++E+ + GL
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDE 60
Query: 262 -----RRHRIDLCPCN------------DGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
R R + C N + + K +IN + G P+ + ++++
Sbjct: 61 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD-------------------- 344
NE K+L+ M T G P V+Y + ++
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180
Query: 345 ---------------------GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G D+A ++I+E M KG FVP Y+ ++ LC A
Sbjct: 181 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKV 239
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A + ++M K VG + TY IL+D C+ G +A + EEM P V TY
Sbjct: 240 EKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LI + +A M+ P+ + +LV +C
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 339
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 214/474 (45%), Gaps = 44/474 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L +S + + + V++QM + + I Y+ +G NE+V +FK +
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRS-----------CYGWE----- 146
S + + N+ + + K + A +F L+ +G+
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401
Query: 147 ----------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ N+L++ +C D A+ +F++M +G PD ++
Sbjct: 402 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ LC RL++A H F + G +Y L+ C+ G++ A +++ +
Sbjct: 462 TVISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517
Query: 251 ILRKGLKAPKSRRHR-IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ K + P + I C +G EG K +++ + G P++ +++++
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEG-KDIMDMMVQTGQRPNVVTFNSLMEGYCLV 576
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + E +LD M + G P+ +Y + K+G +D+AL V + + KG PT +
Sbjct: 577 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSVL 635
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+I+L GL A + A +M + G + TYG+++ GLCR+ EA+ +LE++
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + T+N++I + +G++ EA + + + +P+I +S ++ ++
Sbjct: 695 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 748
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPV---YASMIGILSESNRITEMKEVIDQMKGDSCECK 79
+P A+++FK +++ RH+ P Y +I +R ++ ++ +
Sbjct: 152 APALAIELFKRM-DRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPD 210
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
D ++ I + + G++++A LF + + + N+++KE+ K +++ A + +
Sbjct: 211 DFSYSL-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI-V 268
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + + +L++D LC+ + D A V ++M G P+ +Y+ L+ G
Sbjct: 269 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 328
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
NE+ + F ++S G + + + AL G+ +A I + ++ KG K P
Sbjct: 329 GMWNESVRV----FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK-P 383
Query: 260 KSRRHRIDLCPCNDGED--IEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGD 316
+ L D + ++ N L +G P+ ++ + I+ Y G + +
Sbjct: 384 DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL-INAYARCGMMDKAM 442
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ ++M+ KG P V + +++L + G +D+AL MV P+ VY L++G
Sbjct: 443 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH-MVDIGVPPSEAVYGCLIQG 501
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C+ G A + +M + + + +++ LC++GR E +++ M+ P
Sbjct: 502 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 561
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V T+N L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 562 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 611
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
VY +I + + KE+I +M D F++ I + G++ E +
Sbjct: 494 VYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 553
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ Q +FN+L++ +E A L L + ++ L+D C+
Sbjct: 554 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL-LDAMASIGIEPNCYIYGTLVDGYCKNG 612
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D AL VF++M +G P Y I++ GL RR A MF + + G+ I
Sbjct: 613 RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK----KMFHEMIESGTTVSI 668
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC +A +LEK+ +K + + G E AK L +
Sbjct: 669 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE-AKELFD 727
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P++ +YS M +L E E D + + G
Sbjct: 728 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 768
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT+ YNIL+ + + + ++ K G + +Y L+ G +DG +A
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKN-GLGPDDFSYS-LIYGFVKDGEVDKAHC 231
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EM+ + P + N +I+ LC + + +A +++M+ PD+ +S ++ +C
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291
Query: 485 CNTADLNVCRKTLEQL 500
+ A ++ + LEQ+
Sbjct: 292 KSKA-MDKAERVLEQM 306
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 204/438 (46%), Gaps = 10/438 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +++ L + +I E K+V+ D+ + + + RAG ++ A + +
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +F+++L +VK + A ++R + + + L+D +C+
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAG-YMRKMKDSGIAPNVVTYGTLIDGFFKCQG 484
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL V+++M +G E+ + ++ L N R N ++F + ++G D V
Sbjct: 485 QEAALDVYRDMLHEGV----EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHV 540
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLIN 285
Y TL+ L G + A+++ ++++ + L +P + + + + C C G+ E AKS +
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNL-SPDAVVYNVFINCLCRLGKFSE-AKSFLK 598
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E G P A+Y+ M EG + K+L+EM+ P+L+ Y + L + G
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAG 658
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+V++A + + EM F PT Y +L+ C S ++ + ++ G A+
Sbjct: 659 VVEKA-KYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGAGLHADITV 716
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y LV LC G +A+ VL+EML R P T+N LI G C A +M+
Sbjct: 717 YNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQML 776
Query: 466 SQAKLPDISVWSSLVASV 483
Q P+I+ +++L+ +
Sbjct: 777 HQGLSPNIATFNTLLGGL 794
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 184/372 (49%), Gaps = 16/372 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+ TL+ E K ++E A L+ +RS V + +L+ L+D LC+ R A +
Sbjct: 261 THTTLIGEYCKMKRIEEAFTLYEGMVRSG----VLPDVVTLSALVDGLCRDGRFSEAYAL 316
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
F+EMD G P+ +Y + L +R+NE+ LL M R G D+V+Y T++
Sbjct: 317 FREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSR----GVAMDLVMYTTVMD 372
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGG 292
L +GKI++A +L L + P + + + C G +I+GA+ ++ + +
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNI-TPNCVTYTVLVDAHCRAG-NIDGAEQMLLQMEEKSV 430
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++ ++S++ L G I + + +M+ G P++V Y + FK + AL+
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V + + +G + + L+ GL GN A K M ++ G + + Y L+DG
Sbjct: 491 VYRDMLHEGVEANNF-IVDSLVNGLRKNGNIEEAEALFKDMGER-GLLLDHVNYATLMDG 548
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
L + G A +V +E++ R+ P YNV I LC +GK EA +L+EM + PD
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD 608
Query: 473 ISVWSSLVASVC 484
+ +++++++ C
Sbjct: 609 QATYNTMISAQC 620
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 185/426 (43%), Gaps = 30/426 (7%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V M + E + + + + + G + EA +LFK++ + + ++ TL+ +
Sbjct: 490 DVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGL 549
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQS-----LNLLMDVLCQCRRSDLALHVFQEMDFQ 180
K + AA + G E+ R S N+ ++ LC+ + A +EM
Sbjct: 550 FKTGNMPAALKV------GQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT 603
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G PD+ +Y+ ++ C + ++A LL M W + +++ Y TL+ L + G
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP----NLITYTTLVVGLLEAGV 659
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL-----INEALIRGGIPS 295
++ A +L ++ G P +R L C+ G++S ++E ++ G+ +
Sbjct: 660 VEKAKYLLNEMASAGF-TPTPLTYRRVLQACS------GSRSPYVILEVHELMMGAGLHA 712
Query: 296 -LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ Y+ + L G + VLDEM +G P + + A + K +D A
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ + +G P + +N LL GL AG A + +M K++G N TY ILV G
Sbjct: 773 AQMLHQG-LSPNIATFNTLLGGLESAGRIGEADTVICEM-KKMGLEPNNLTYDILVTGYA 830
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ +EA R+ EM+ + + P TYN LI G +A EM + L S
Sbjct: 831 KKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSS 890
Query: 475 VWSSLV 480
+ L+
Sbjct: 891 TYDILL 896
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 21/308 (6%)
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY+I + GL A +L M ++G D V T L L G + +A
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEM----CKRGVPWDGVTMSTALVGLSRTGLVGEA 171
Query: 245 MQILEKILR-KGLKAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSL 296
+ E ++R +G+ + + N DG +D+ A +++ +G +
Sbjct: 172 AALAEMLVRGRGIDG-------LGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDV 224
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + + G +V + M+ G PS+V + + K ++EA + E
Sbjct: 225 VGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAF-TLYE 283
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
MV+ +P V + L+ GLC G + A ++M K +G N TY +D L +
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDK-IGVAPNHVTYCTFIDSLAKV 342
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R E+ +L EM+ R + Y ++ L GK EA L +S P+ +
Sbjct: 343 QRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTY 402
Query: 477 SSLVASVC 484
+ LV + C
Sbjct: 403 TVLVDAHC 410
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 207/467 (44%), Gaps = 10/467 (2%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
I+K P +A FK + N+ H M+ IL E RI +M V D M+
Sbjct: 104 ILKSISDPNSAFSYFKIVSQ-LTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVI 162
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
+ + T + + G + A + +++ + S+N L+ ++ EA +
Sbjct: 163 YRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKV 222
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ +K +++ + LM L + + +++ +EM G P+ +Y I ++ L
Sbjct: 223 Y--KRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRAL 280
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
RR+++A + +F + +G G D++ Y L+ ALC GK+ A ++ K +R
Sbjct: 281 GRARRIDDA----WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVK-MRASS 335
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+P + + D+E K NE + G P + +Y+ + L G +
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+LD M TKG +P+L Y + L K +DEALE++E G PT Y + +
Sbjct: 396 DMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGV-KPTAFSYVLFIDY 454
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
+G+ A A+ + M K+ G + + + L GR EA + ++ P
Sbjct: 455 YGKSGDPAKAIDTFETMKKR-GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN+L++ G+ +A L EMIS+ PD+ + +SL+ ++
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTL 560
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 201/477 (42%), Gaps = 50/477 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ S++ +I + +++ +M CE + + I T +AG+++ A +F L
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N LL + KE K+ A LF S + N L+D L +
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELF-GSMTESGCPPNTITFNSLLDCLSKNDA 635
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ--KGSGED 224
DLAL +F M C PD +Y+ ++ GL + R++ A FW Q K D
Sbjct: 636 VDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYA-------FWFFHQMKKFLSPD 688
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEG---- 279
V TL+ + G+++DA++++ + + + L+ + C + E E
Sbjct: 689 YVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFA 748
Query: 280 ------------------------------AKSLINEALIRGGI-PSLASYSAMAIDLYN 308
A+++ ++ GI P+L SY+ + L
Sbjct: 749 EILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLG 808
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ ++ ++M++ G P+ Y L A K +++ ++ E +G P
Sbjct: 809 SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGC-EPNAI 867
Query: 369 VYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+NI++ L + N A+ +Y + MS TYG L+DGL + GR +A ++ E
Sbjct: 868 THNIIISALVKSNNLNKALDLYYELMSGDFSPTPC--TYGPLIDGLLKAGRSEQAMKIFE 925
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EML P YN+LI G G+ A ++M+ + PD+ ++ LV +C
Sbjct: 926 EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 42/360 (11%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+K + K K A +F + + ++S N LMD L ++ AL +F++M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G +P+ +Y++L+ +R+N+ LY ++ + +G + + + ++ AL
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINK----LYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+ + +++ G +P PC G I+G
Sbjct: 882 LNKALDLYYELM-SGDFSPT---------PCTYGPLIDG--------------------- 910
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
L GR + K+ +EM G P+ V+Y + K G +D A E+ ++ MVK
Sbjct: 911 -----LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK-MVK 964
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P ++ Y IL++ LC G AV Y +++ K G + +Y +++GL + R
Sbjct: 965 EGIRPDLKSYTILVECLCITGRIDEAVQYFEEL-KLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA + EM R P + TYN LI L GK AV EE+ P + +++L+
Sbjct: 1024 EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 15/352 (4%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYAS----MIGILSESNRITEMKEVID 69
L +++ K+K L A +F +K+ P S M G+L SN + E+ +
Sbjct: 766 LIKVLCKRKKALDAQNVF----DKFTKNLGIHPTLESYNCLMDGLLG-SNFTEKALELFE 820
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
MK + + + + ++ ++N+ L+ + C + N ++ +VK +
Sbjct: 821 DMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
L A L+ G + + L+D L + RS+ A+ +F+EM GC P+ Y
Sbjct: 881 NLNKALDLYYELMSG-DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIY 939
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL+ G ++ A L F ++ ++G D+ Y L+ LC G+I +A+Q E
Sbjct: 940 NILINGFGKSGEIDFACEL----FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ GL P + + + ++ A SL +E RG P L +Y+A+ + L
Sbjct: 996 ELKLTGLD-PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
G++ K+ +E++ G PS+ Y A + G D+A V ++ MV G
Sbjct: 1055 GKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 195/479 (40%), Gaps = 47/479 (9%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y I L + RI + + +M + C + I AG+L++A
Sbjct: 267 RPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKE 326
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQSLNLLM 158
L+ + + ++ TL+ + K LE R EV + + +L+
Sbjct: 327 LYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK----RFWNEMEVDGYAPDVVTYTILI 382
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------ 212
+ LC+ D A + M +G +P+ +Y+ ++ GL RRL+EA LL +M
Sbjct: 383 EALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVK 442
Query: 213 -------------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
F + ++G I L+ L + G+I +A I
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ + GL + + C G+ I+ A L++E + +G P + +++ LY
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQ-IDKATQLLSEMISKGCEPDVMIINSLINTLY 561
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
GR+ K+ ++ P++V Y L L K+G + +ALE+ M + P
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF-GSMTESGCPPNT 620
Query: 368 RVYNILLKGLCDAGNSAV--AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+N LL C + N AV A+ +M+ + C + TY ++ GL R+GR A
Sbjct: 621 ITFNSLLD--CLSKNDAVDLALKMFCRMT-MMNCNPDVLTYNTIIYGLIREGRIDYAFWF 677
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS-VWSSLVASV 483
+M + P T LI G+ G+ +A+ + E + QA L S W L+ +
Sbjct: 678 FHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECI 735
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 215/496 (43%), Gaps = 12/496 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K+ L AL++F E N + S++ LS+++ +
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTES--GCPPNTITFNSLLDCLSKNDAVDLAL 640
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M +C + T I R G+++ A F + +F ++ + TL+ +
Sbjct: 641 KMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYV-TLCTLIPGV 699
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+ ++E A + + + +++ Q LM+ + + A+ + + D
Sbjct: 700 VRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQD 759
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-GSGEDIVIYRTLLFALCDQGKIQDA 244
L+K LC ++ +A ++ F + ++ G + Y L+ L + A
Sbjct: 760 DHVMLPLIKVLCKRKKALDAQNV----FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++ E + G P + + + L + I L +E RG P+ +++ +
Sbjct: 816 LELFEDMKSAGTH-PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + + + E+ + F P+ Y + L K G ++A+++ EE + G
Sbjct: 875 ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC-G 933
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P +YNIL+ G +G A KKM K+ G + ++Y ILV+ LC GR EA +
Sbjct: 934 PNSVIYNILINGFGKSGEIDFACELFKKMVKE-GIRPDLKSYTILVECLCITGRIDEAVQ 992
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EE+ + P +YN +I GL + EA+ EM ++ PD+ +++L+ +
Sbjct: 993 YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052
Query: 485 CNTADLNVCRKTLEQL 500
++V K E+L
Sbjct: 1053 I-AGKVDVAVKMYEEL 1067
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G I + SY+ + I L G E KV M ++G PS+ Y A + AL + G +
Sbjct: 196 GFILNAYSYNGL-IHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ ++EE G P + Y I ++ L A A K+M + GC + TY +L+
Sbjct: 255 MNLLEEMKSIG-LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDE-GCGPDVITYTVLI 312
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D LC G+ +A + +M S+ P TY L+ +G + EM
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372
Query: 471 PDISVWSSLVASVC 484
PD+ ++ L+ ++C
Sbjct: 373 PDVVTYTILIEALC 386
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 20/374 (5%)
Query: 117 SFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+FNTL+ + E ++ EA L G++ + + ++++ LC+ ++ A+ +
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ--PTVYTHTMIVNGLCKIGKTSAAIVWMK 233
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+M C P+ SY I++ LC +R +NEA L Y M G +V Y +L++ +
Sbjct: 234 KMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM----RSIGISPTVVTYNSLIYGM 289
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C+ G+ + A + +++L +K + C +G +E A S+ + + P
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLE-ALSVFGKMIQIAMEPD 348
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +YS++ + E +L+EM ++ P +V + + K GMV EA +I
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIIN 408
Query: 356 EEMVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
M++ P V YN L+ G C D +M K GC + +Y IL+
Sbjct: 409 L-MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK------GCAPDVLSYNILI 461
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G C+ R EA ++ +EM + P T+ LI GLC G+ Y A ++M S
Sbjct: 462 KGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCP 521
Query: 471 PDISVWSSLVASVC 484
PD+ +S+L++ C
Sbjct: 522 PDLITYSTLLSGFC 535
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 181/403 (44%), Gaps = 10/403 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T I G++ EA+ + + ++ + K K AA I++++
Sbjct: 177 FNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAA-IVWMKKM 235
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + S ++++D LC+ R + A+ +F M G P +Y+ L+ G+CN +
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295
Query: 203 NEATHLLYSMF-WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A+ L M W + D+V + L+ ALC +G + +A+ + K+++ ++
Sbjct: 296 KQASILFKEMLEWNMK-----PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C E + +L+NE L R P + ++S +G + E +++
Sbjct: 351 TYSSLIHGVCKSSLWKESS-TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P++V Y + + +DEA +V + + KG P V YNIL+KG C +
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC-APDVLSYNILIKGYCKSE 468
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A +MS + G N T+ L+ GLC+ GR A + ++M P + TY
Sbjct: 469 RIDEAKQLFDEMSHK-GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ L+ G C G EA+ E + P+ + L+ +C
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMC 570
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 172/416 (41%), Gaps = 47/416 (11%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
S I MK++++ CE + ++ I + + +NEAV LF ++ +
Sbjct: 226 SAAIVWMKKMVEL----DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
+N+L+ M + + A ILF + W +K + + ++L+D LC+ AL VF +M
Sbjct: 282 YNSLIYGMCNSGQWKQASILF-KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
PD +Y L+ G+C E++ LL M R + D+V + + C
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR----PDVVTFSIWVDVFCK 396
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+G + +A +S+IN + RG P++
Sbjct: 397 KGMVSEA------------------------------------QSIINLMIERGLRPNVV 420
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+++ ++ E KV D M KG P ++ Y + K +DEA ++ +E
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
KG P + L+ GLC AG A KKM GC + TY L+ G C+ G
Sbjct: 481 SHKG-LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH-GCPPDLITYSTLLSGFCKHG 538
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
EA + E + P +L+ G+C GK +A + + PD+
Sbjct: 539 HLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 167/349 (47%), Gaps = 10/349 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I N L+ L + + D + ++++M+F G + IL+ LC+ + L +
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVG----LGF 159
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ +I + G I+ + TL+ LC +G+I +AM+ L+ I+ +G + I
Sbjct: 160 SVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGL 219
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV-EGDKVLDEMRTKGFWP 329
C G+ A + + + P + SYS + ID + R+V E + MR+ G P
Sbjct: 220 CKIGKT-SAAIVWMKKMVELDCEPEVVSYSII-IDSLCKNRLVNEAVDLFYHMRSIGISP 277
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++V Y + + + G +A ++ +EM++ P V ++IL+ LC G A+
Sbjct: 278 TVVTYNSLIYGMCNSGQWKQA-SILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV 336
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
KM Q+ + TY L+ G+C+ + E+S +L EML R+ P V T+++ + C
Sbjct: 337 FGKMI-QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
G EA + MI + P++ ++SL+ C ++ ++ RK +
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHS-QMDEARKVFD 443
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
++M +P + + LAAL + D + + + G +V IL+ LC
Sbjct: 92 FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC-SVYTLTILINCLC 150
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ L K+ K +G + T+ L++GLC +GR +EA L+ ++ R Y P V
Sbjct: 151 HLHLVGLGFSVLGKIFK-LGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTV 209
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
T+ +++ GLC IGK A++W+++M+ P++ +S ++ S+C N
Sbjct: 210 YTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 33 EAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EAK+ + H G P + ++I L ++ R KE+ +M C ++T +
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ + G L+EA++LF+ L + LL M K KLE A LF
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELF 582
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 196/409 (47%), Gaps = 22/409 (5%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
A + + R L EA SL L V S+NT+L + + + A L
Sbjct: 49 AACLNRHLRLLPLGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSL 105
Query: 144 GWEVKSRIQSLN--LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
R +++ +LM LC R +D A+ + + M G D +Y L++GLC+
Sbjct: 106 EPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE 165
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+++A L+ M + G ++V+Y +LL C G+ +D ++ ++ KG++ P
Sbjct: 166 VDKAVELMGEM----CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIE-PDV 220
Query: 262 RRHR--ID-LCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDK 317
+ ID LC + G + + ++R G+ P++ +Y+ + + EG + E
Sbjct: 221 VMYTGLIDSLCKVGKAKKAHG----VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV--PTVRVYNILLK 375
VL +M KG P +V Y + L +DEA+ ++EE MV+G + P V +N +++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE-MVRGKNIVKPNVVTFNSVIQ 335
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLCD G A ++ M ++ GC+ N TY +L+ GL R + +A +++EM
Sbjct: 336 GLCDIGRMRQA-FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE 394
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY++LI+G C + + A L M + P++ + L+ ++C
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMC 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 204/453 (45%), Gaps = 29/453 (6%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + Y ++I L ++ + + E++ +M E V+++ ++ Y ++G+ +
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDV 160
+F +S+ + L+ + K K + AH ++ + G E + + N+L++
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE--PNVVTYNVLINC 264
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+C+ A+ V ++M +G PD +Y+ L+KGL + ++EA LL M +
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR--GKNI 322
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG----------LKAPKSRRHRIDLCP 270
++V + +++ LCD G+++ A Q+ + G L R H++
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV---- 378
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
A L++E G P +YS + ++ + +L MR +G P
Sbjct: 379 -------RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
L Y L A+ + GM++ A + E + F V Y+ ++ G C AG+ A L
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNE--MDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K + + G + TY I+++ + G A+ VL++M + P V ++ LI+G +
Sbjct: 490 KSIVDE-GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G+ + + + EMI++ D + S+L S+
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTLSTSL 581
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 192/451 (42%), Gaps = 19/451 (4%)
Query: 36 EKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQ 95
E +P R N Y ++ L + ++ M+ + T IR A +
Sbjct: 106 EPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE 165
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++AV L + + +++LL+ K + E +F+ ++ +
Sbjct: 166 VDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG-IEPDVVMYT 224
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+D LC+ ++ A V M +G P+ +Y++L+ +C + + EA +L M
Sbjct: 225 GLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM--- 281
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKSRRHRI---DLCPC 271
S+KG D+V Y TL+ L D ++ +AM +LE+++R K + P LC
Sbjct: 282 -SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI 340
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
++++ E G + +L +Y+ + L ++ + +++DEM + G P
Sbjct: 341 GRMRQAFQVRAMMEET---GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y + K VD A +++ +G P + Y LL +C+ G A
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRG-IEPELFHYIPLLVAMCEQGMMERARNLFN 456
Query: 392 KMSKQ--VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+M + VA Y ++ G C+ G A +L+ ++ P TY+++I
Sbjct: 457 EMDNNFPLDVVA----YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G A L++M + LPD++V+ SL+
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 154/371 (41%), Gaps = 50/371 (13%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
K+F E EK + +Y +I L + + + V+D M E + I
Sbjct: 206 KVFVEMSEK--GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLIN 263
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK----------------EMVKESKLE 132
+ G + EA+ + K +S+ ++NTL+K EMV+ +
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIV 323
Query: 133 AAHILFLRSCY-----------GWEVKSRIQ---------SLNLLMDVLCQCRRSDLALH 172
+++ S ++V++ ++ + NLL+ L + + A+
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ EM G PD +Y IL+KG C +++ A LL +M +G ++ Y LL
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM----RDRGIEPELFHYIPLL 439
Query: 233 FALCDQGKIQDAMQILEKI---LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
A+C+QG ++ A + ++ + A + H C G D++ AK L+ +
Sbjct: 440 VAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHG----ACKAG-DLKTAKELLKSIVD 494
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P +YS + G + + VL +M GF P + ++++ + G +++
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554
Query: 350 ALEVIEEEMVK 360
LE+I E + K
Sbjct: 555 VLELIREMITK 565
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 193/424 (45%), Gaps = 62/424 (14%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFK--NLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
C+ SVF IR Y R G + +A+ F+ + FN +T N LL ++VKE K+ A
Sbjct: 94 CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYT--CNMLLGKLVKERKVGA 151
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
+ F +EM + PD +++IL+
Sbjct: 152 VWLFF------------------------------------KEMLARRVCPDVSTFNILI 175
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
LC + +L +A +LL M + G +V Y T+L C +G+ + A+++++++
Sbjct: 176 NVLCVEGKLKKAGYLLKKM----EESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGS 231
Query: 254 KGLKAPKSRRHRI--DLCPCNDGEDIEGAKS--LINEALIRGGIPSLASYSAMAIDLYNE 309
KG++A + + DLC N AK L+ + R P+ +Y+++ E
Sbjct: 232 KGIEADACTYNMLVDDLCKNN-----RSAKGYLLLKKMRKRMISPNEITYNSIINGFVKE 286
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G+I ++ EM P+ V Y A + DG ++AL ++E G P
Sbjct: 287 GKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP-KPNEVS 345
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQ---VGCVANGETYGILVDGLCRDGRFLEASRVL 426
Y+ LL GLC ++ L++M VGC+A Y ++DGLCR+G E+ ++L
Sbjct: 346 YSALLNGLCRHAKFELSKSILERMRMNGMIVGCIA----YTAMIDGLCRNGLLNESVKLL 401
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
++ML P V T++VLI G C +GK + +M P+ ++++L+ + C
Sbjct: 402 DKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNY-CK 460
Query: 487 TADL 490
T D+
Sbjct: 461 TGDV 464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 9/408 (2%)
Query: 78 CKD-SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
C D S F I G+L +A L K + + V ++NT+L K+ + +AA +
Sbjct: 165 CPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAA-L 223
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ +++ + N+L+D LC+ RS + ++M + P+ +Y+ ++ G
Sbjct: 224 ELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGF 283
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ ++ AT + F +S + V Y L+ C G + A+ ILE + G
Sbjct: 284 VKEGKIGAATRI----FQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
K P + L E +KS++ + G I +Y+AM L G + E
Sbjct: 340 K-PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K+LD+M G P +V + + + G + E+I + M K P +Y L+
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK-MYKAGLAPNSIIYTTLIYN 457
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G+ A MS+ +G AN +LV LC+DG+ A M P
Sbjct: 458 YCKTGDVVEAFKVYVAMSR-IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T++ +I G + G +A +EMI P + L+ ++C
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 192/503 (38%), Gaps = 76/503 (15%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L ++NR + ++ +M+ + + + I + + G++ A +F+ +S
Sbjct: 241 YNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMS 300
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
N + ++N L+ + E A + L K S + L++ LC+ +
Sbjct: 301 MLNLLPNCVTYNALIDGHCHDGNFEQA-LTILEMMEATGPKPNEVSYSALLNGLCRHAKF 359
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--------------- 212
+L+ + + M G +Y ++ GLC + LNE+ LL M
Sbjct: 360 ELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVL 419
Query: 213 ---FWRISQ-------------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
F R+ + G + +IY TL++ C G + +A ++ + R G
Sbjct: 420 INGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479
Query: 257 KAPKSRRHRIDLCPCNDGED-------------------------IEG---------AKS 282
A + + C DG+ I G A S
Sbjct: 480 DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +E + G PS +Y + L G+ E ++LD++ V Y L F
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETF 599
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K GM+ +A+ + +EMV+ +P Y I+ GL G A+ + + +
Sbjct: 600 KSGMLTDAVALF-DEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPE 658
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA----- 457
Y VDGL R G+ A E+M + NV++ G +GK +A
Sbjct: 659 KVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFT 718
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+MW IS P ++ ++ L+
Sbjct: 719 MMWSGITIS----PSLATYNILL 737
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 180/439 (41%), Gaps = 12/439 (2%)
Query: 10 TPTYLSQIIKKQKSPL--TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
T TY + +++ KS + A+ +F E ++ N + YA + L ++
Sbjct: 588 TVTYNTILVETFKSGMLTDAVALFDEMVQR--NVLPDSYTYAIIFAGLIRRGKMVAALHF 645
Query: 68 IDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
+ G + V + T + RAGQ A+ +++ + + N +L
Sbjct: 646 YGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYS 705
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ K+ A +F G + + + N+L+ + + +++ M G +PD+
Sbjct: 706 RMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDK 765
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+ H L+ G C L+ + ++ G D + L+ C+ ++ A
Sbjct: 766 LTCHSLILGFCKSAMLDVGL----KLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFD 821
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
++ I+ P H + + ++ + L++E L RG IP Y A+ +
Sbjct: 822 LVN-IMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRM 880
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G I K+ DEM G V A + L K G V+EA +++ + M++ + +PT
Sbjct: 881 CRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEA-KLVLDFMLRKSLIPT 939
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+ + L+ C S V + LK + Y +L+ GLC DG A ++
Sbjct: 940 IATFTTLMHMFC-RNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998
Query: 427 EEMLIRSYWPCVETYNVLI 445
+E+ R WP + TY +LI
Sbjct: 999 KEIKQRGLWPNMTTYCILI 1017
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 177/472 (37%), Gaps = 41/472 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ +I +I +KE+I +M ++ T I Y + G + EA ++ +S
Sbjct: 416 FSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMS 475
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ N L+ + K+ K+ A F V + I + + +++
Sbjct: 476 RIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI-TFDCIINGYGNSGNG 534
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F EM G +P +Y L+K LC + EA LL + + S D V
Sbjct: 535 LKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHY----IPSAVDTVT 590
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T+L G + DA+ + ++++++ + P S + I + A
Sbjct: 591 YNTILVETFKSGMLTDAVALFDEMVQRNV-LPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649
Query: 288 LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +G + P Y+ L+ G+ ++M G L+ L + G
Sbjct: 650 LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQV-------- 397
+ +A ++ T P++ YNILL G N S + +Y M +
Sbjct: 710 MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769
Query: 398 -------------------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
G + T+ +L+ C +A ++ M +
Sbjct: 770 SLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+P + T++ +I L + E+ + L EM+ + +PD + +LV +C
Sbjct: 830 DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMC 881
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/501 (18%), Positives = 200/501 (39%), Gaps = 43/501 (8%)
Query: 25 LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L A +F E + + H Y ++ L + + E K ++D++ +
Sbjct: 535 LKAFSMFDEMIKAGHHPSH--FTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYN 592
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T + ++G L +AV+LF + Q N + + ++ + +++ K+ AA +
Sbjct: 593 TILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK 652
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
V +D L + +S AL+ ++M+ G D + ++++ G ++ +
Sbjct: 653 GAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAK 712
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A + ++M W S + Y LL + + + ++R G+ K H
Sbjct: 713 AGDI-FTMMW--SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ L C ++ L+ + L+ G +++ + + + + +++ M
Sbjct: 770 SLILGFCKSAM-LDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNL 828
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+P + +++ ++ L + V E+ ++ E + +G +P R Y L+ +C G+
Sbjct: 829 FDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGC-IPDRRQYIALVNRMCRMGHIH 887
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET---- 440
A LK + +G + LV GL + G+ EA VL+ ML +S P + T
Sbjct: 888 GA-FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTL 946
Query: 441 -------------------------------YNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
YNVLI GLC+ G A+ +E+ +
Sbjct: 947 MHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGL 1006
Query: 470 LPDISVWSSLVASVCCNTADL 490
P+++ + L+ ++ N L
Sbjct: 1007 WPNMTTYCILIDAIFTNDISL 1027
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
E L R P +++++ + L EG++ + +L +M G+ PS+V Y L
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV----- 397
K G ALE+I++ KG YN+L+ LC SA + LKKM K++
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADAC-TYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273
Query: 398 --------GCVANGE---------------------TYGILVDGLCRDGRFLEASRVLEE 428
G V G+ TY L+DG C DG F +A +LE
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
M P +Y+ L+ GLC K + LE M + +++++ +C N
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393
Query: 489 DLNVCRKTLEQL 500
LN K L+++
Sbjct: 394 -LNESVKLLDKM 404
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ S L LH EM +GC PDR Y L+ +C ++ A L M G
Sbjct: 852 QESHLLLH---EMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEM----EALGISSG 904
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V L+ L GK+++A +L+ +LRK L + + C + +E K +
Sbjct: 905 DVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK--L 962
Query: 285 NEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + + + +Y+ + L +G + K+ E++ +G WP++ Y + A+F
Sbjct: 963 KDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFT 1022
Query: 344 DGMVDEALEVIEEEM 358
+ + EV+ +++
Sbjct: 1023 NDISLAKGEVLLKDL 1037
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 7/335 (2%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ LL+D C+ +RS A +F+ M G P+R +Y L+ G + + EA +
Sbjct: 312 HTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M R G ++V Y ++ + G++ AM + ++L G++ P + + + +
Sbjct: 372 MITR----GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE-PDTWTYNLLIDGY 426
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D+ A L+ E R PS +YS + L + + + ++VLD+M G P++
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
MY + A ++ + A+E+++ + G +P + YN L+ GLC A A M L
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGV-LPDLFCYNCLIIGLCRAKKVEEAKMLLV 545
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M ++ G N TYG ++ + G A R ++ML P Y +LI+G C +
Sbjct: 546 DMGEK-GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G EA+ + M+ + +PDI +S+++ S+ N
Sbjct: 605 GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 195/457 (42%), Gaps = 9/457 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + IG L ++ + E EV M + + + + + EA +F+++
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L+ +KE +E A + +K + + N ++ + +
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEA-LRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ +F EM G PD +Y++L+ G + +A LL M R
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP----F 452
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LC +Q A ++L++++R G+K P + + E A L+
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVK-PNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G +P L Y+ + I L ++ E +L +M KG P+ Y A + K G
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A E ++M+ VP +Y IL+KG CD GN+ A+ K M ++ G + + Y
Sbjct: 572 IQVA-ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK-GLIPDIRAY 629
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ L ++G+ EA V + L P V YN LI G C G +A +EM+
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 467 QAKLPDISVWSSLVASVC-CNTADLNVCRKTLEQLSS 502
P+I V+++L+ C + +L K +++ S
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 48/439 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L S+ + + EV+DQM + + ++ T I+ Y + + A+ L K +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +N L+ + + K+E A +L + +K + +++ +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGE 571
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A F++M G P+ Y IL+KG C+ EA S F + +KG DI
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL----STFKCMLEKGLIPDIR 627
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y ++ +L GK ++AM + K L+ G+
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGV------------------------------ 657
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA--ALFKD 344
+P + Y+++ EG I + ++ DEM G P++V+Y + K
Sbjct: 658 ------VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANG 403
G + EA ++ +E + KG P +Y IL+ G GN A+ ++ + K VG ++
Sbjct: 712 GNLTEAFKLFDEMISKG-ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-- 768
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+ L+D C+ G+ +EA + ++M+ + P + TY +LI EA +
Sbjct: 769 -AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827
Query: 464 MISQAKLPDISVWSSLVAS 482
M ++ +P+ ++SL+ S
Sbjct: 828 METRNIIPNTLTYTSLLLS 846
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 200/442 (45%), Gaps = 20/442 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L + ++ E K ++ M + + I Y+++G++ A FK++
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V + L+K A F + + I++ + ++ L + ++
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTF-KCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ VF + G PD Y+ L+ G C + + +A+ L M G +IV+
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML----HNGINPNIVV 698
Query: 228 YRTLL--FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y TL+ + C G + +A ++ ++++ KG+ +P + I + C ++E A SL +
Sbjct: 699 YNTLINDYGYCKSGNLTEAFKLFDEMISKGI-SPDGYIYCILIDGCGKEGNLEKALSLFH 757
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
EA + + SL++++++ G+++E ++ D+M K P++V Y + A K
Sbjct: 758 EAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 816
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
M++EA E + +M +P Y LL GN + K M + G +
Sbjct: 817 MMEEA-EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR-GIACDAIA 874
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
YG++ C++G+ LEA ++L + L+ + ++ LI LC KQ V+ E++
Sbjct: 875 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCK-EKQISTVL---ELL 930
Query: 466 SQAKLPDISVWSSLVASVCCNT 487
S+ ++S ++S CNT
Sbjct: 931 SEMGKEELS-----LSSKTCNT 947
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 11/349 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++ I + ++ G+ EA+ +F + V +N+L+ KE +E A L+
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + I N L++ C+ +L A +F EM +G PD Y IL+ G +
Sbjct: 689 HNG-INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
L +A S+F QK G + + +L+ + C GK+ +A ++ + ++ K L P
Sbjct: 748 NLEKAL----SLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKL-TPN 801
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I + E +E A+ L + R IP+ +Y+++ + G + +
Sbjct: 802 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M +G + Y +A K+G EAL+++ + +V+G + V++ L+ LC
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED-DVFDALIFHLCKE 920
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ + L +M K+ +++ +T L+ G + G EAS+VL M
Sbjct: 921 KQISTVLELLSEMGKEELSLSS-KTCNTLLLGFYKSGNEDEASKVLGVM 968
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 130/329 (39%), Gaps = 35/329 (10%)
Query: 186 RESYHILMKGLCNDRRLN--------------EATHLLYSMFWRISQKGSGEDIVIYRTL 231
R+ + IL+ N R+LN ++ L W S+ + + + Y L
Sbjct: 67 RKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSIL 126
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED--------------- 276
LC+ G I A +LEK+L+ K P + C G
Sbjct: 127 AIRLCNSGLIHQADNMLEKLLQTR-KPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVL 185
Query: 277 --IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ A S+ ++ G P+L + + DL + KV M P + Y
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ A K G V + V+ E ++ P + YN + GLC G + + +KK+
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSE--MEKECKPNLFTYNAFIGGLCQTG-AVDEALEVKKLM 302
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G +G TY +LVDG C+ R EA + E M P TY LI G G
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASV 483
EA+ +EMI++ ++ +++++ +
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGI 391
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 217/494 (43%), Gaps = 62/494 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I ++ ++ + E++D+MK + + +T I+ R G+++EA+ FK++
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF------LRSCYGWEVKSRIQSLNLLMDV 160
+ C ++NT++ + K ++++ LF + +G E + S + ++D
Sbjct: 61 GE-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCE--PDVISYSTVIDA 117
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY---------- 210
LC+ +R D A F+ M GC P+ +Y L+ GLC R++EA LL
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177
Query: 211 SMFW---------------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+M++ + +KG G +I+ + +L AL + + A Q E
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L+ G K P + + + ++ A ++ E + P + +YS++
Sbjct: 238 RLLKSG-KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 296
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR+ + D V M P V + L + EA V E+MV F+P ++
Sbjct: 297 GRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV-HEDMVNAGFIPGLQT 355
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN+L+ +C A + A+ KM ++ + TY L+ LCR R EA L+ M
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKR-QPDANTYAPLIQCLCRARRVDEAKEFLDVM 414
Query: 430 LIRSYWP----CVETYNVLIRG---------------LCSIGKQYEAVMWLEEMISQAKL 470
+ P C VL + +C G+ EAV +E+M+ +
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVR 474
Query: 471 PDISVWSSLVASVC 484
PD + + +++ S+C
Sbjct: 475 PDEATYVAVLRSLC 488
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 179/436 (41%), Gaps = 24/436 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S+I L + +R+ E ++ Q+KG+ + + + + R G+ +E + L
Sbjct: 142 NVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELL 201
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ + FN +L + K + E A F R + K + + N+ + LC+
Sbjct: 202 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCK 260
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D A + EM PD +Y ++ G C R+++A +F R+
Sbjct: 261 AGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD----DVFTRMMVHECIP 316
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
V + TLL + K ++A ++ E ++ G + + C C + +E A +
Sbjct: 317 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCG-ADSVESALEI 375
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++ + P +Y+ + L R+ E + LD M P+ + A + L K
Sbjct: 376 YHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G VDEA V++ N++ +C AG AV +++M + G +
Sbjct: 436 QGEVDEACSVLD---------------NVV--EICKAGEPDEAVEVIEQMVLK-GVRPDE 477
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++ LC R A E+M R P + TY +LI CS +A E
Sbjct: 478 ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEA 537
Query: 464 MISQAKLPDISVWSSL 479
M++ P +L
Sbjct: 538 MVAAGFTPQAQTMRTL 553
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 145/344 (42%), Gaps = 31/344 (9%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y + L ++ ++ E ++ +M +++ I + +AG++++A
Sbjct: 245 KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADD 304
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F + C+ +F TLL + K A + + +Q+ N+LMD +
Sbjct: 305 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG-LQTYNVLMDCV 363
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C + AL ++ +M + PD +Y L++ LC RR++EA L M
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM--------E 415
Query: 222 GEDIV----IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+++V I L+ LC QG++ +A +L+ ++ C GE
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPD 459
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A +I + +++G P A+Y A+ L R+ ++M ++G P LV Y
Sbjct: 460 E-AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ M D+A + E MV F P + L L DAG
Sbjct: 519 IGEACSADMADDAFRIF-EAMVAAGFTPQAQTMRTLSSCLRDAG 561
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 214/474 (45%), Gaps = 44/474 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L +S + + + V++QM + + I Y+ +G NE+V +FK +
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 265
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRS-----------CYGWE----- 146
S + + N+ + + K + A +F L+ +G+
Sbjct: 266 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 325
Query: 147 ----------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ N+L++ +C D A+ +F++M +G PD ++
Sbjct: 326 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 385
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
++ LC RL++A H F + G +Y L+ C+ G++ A +++ +
Sbjct: 386 TVISSLCRIGRLDDALH----KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441
Query: 251 ILRKGLKAPKSRRHR-IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ K + P + I C +G EG K +++ + G P++ +++++
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEG-KDIMDMMVQTGQRPNVVTFNSLMEGYCLV 500
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + E +LD M + G P+ +Y + K+G +D+AL V + + KG PT +
Sbjct: 501 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-KPTSVL 559
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+I+L GL A + A +M + G + TYG+++ GLCR+ EA+ +LE++
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIES-GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + T+N++I + +G++ EA + + + +P+I +S ++ ++
Sbjct: 619 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 672
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 175/404 (43%), Gaps = 44/404 (10%)
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+L+ VK+ +++ AH LFL V +I N ++ LC+ + D A + Q+M
Sbjct: 139 SLIYGFVKDGEVDKAHCLFLE-MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD 197
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G PD +Y +++ GLC + +++A +L M + G+ + + Y +L+ G
Sbjct: 198 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV----EAGTRPNSITYNSLIHGYSISG 253
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++++ +++ G+ + G E AK + + +++G P + SY
Sbjct: 254 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE-AKCIFDSMVLKGPKPDIISY 312
Query: 300 SAMA-----------IDLYNE--------------------------GRIVEGDKVLDEM 322
S M D++N G + + + ++M
Sbjct: 313 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 372
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ KG P V + +++L + G +D+AL MV P+ VY L++G C+ G
Sbjct: 373 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH-MVDIGVPPSEAVYGCLIQGCCNHGE 431
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + +M + + + +++ LC++GR E +++ M+ P V T+N
Sbjct: 432 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 491
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L+ G C +G EA L+ M S P+ ++ +LV C N
Sbjct: 492 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 535
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+D + R DL L + + G PD SY L+ G D +++A +
Sbjct: 100 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA----H 154
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+F + ++G I+I +++ LC ++ A I++K++ G+ AP + + +
Sbjct: 155 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI-APDLFTYSLIIDG 213
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ ++ A+ ++ + + G P+ +Y+++ G E +V +M + G P+
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMY 389
+ + + ALFK G +EA + + ++KG P + Y+ +L G A +S +A V
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHN 332
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ + G N + IL++ R G +A + E+M + P T+ +I LC
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
IG+ +A+ M+ P +V+ L+ CCN +L ++ + ++
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG-CCNHGELVKAKELISEM 442
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
VY +I + + KE+I +M D F++ I + G++ E +
Sbjct: 418 VYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 477
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ Q +FN+L++ +E A L L + ++ L+D C+
Sbjct: 478 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL-LDAMASIGIEPNCYIYGTLVDGYCKNG 536
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D AL VF++M +G P Y I++ GL RR A MF + + G+ I
Sbjct: 537 RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK----KMFHEMIESGTTVSI 592
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L LC +A +LEK+ +K + + G E AK L +
Sbjct: 593 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE-AKELFD 651
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G +P++ +YS M +L E E D + + G
Sbjct: 652 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PT+ YNIL+ + + + ++ K G + +Y L+ G +DG +A
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKN-GLGPDDFSYS-LIYGFVKDGEVDKAHC 155
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EM+ + P + N +I+ LC + + +A +++M+ PD+ +S ++ +C
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215
Query: 485 CNTADLNVCRKTLEQL 500
+ A ++ + LEQ+
Sbjct: 216 KSKA-MDKAERVLEQM 230
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 197/427 (46%), Gaps = 14/427 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A L L ++++ + + ++D LC+ R D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EM+ +G P+ +Y L+ LCN R ++A+ LL M ++ ++V +
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI----ERKINPNVVTF 333
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 392
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + RI EG ++ EM +G + V Y + F+ D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A +++ ++MV P + YN LL GLC G + V YL++ SK + T
Sbjct: 453 NA-QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIY---T 507
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V YN +I G C G + EA +M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 466 SQAKLPD 472
LPD
Sbjct: 568 EDGPLPD 574
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 204/447 (45%), Gaps = 18/447 (4%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y +I ++I+ ++ +M E ++ + Y ++++AV+L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLM 158
+ + T +F TL+ + +K A L R C + + + +++
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-----QPNLVTYGVVV 232
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ LC+ DLA ++ +M+ + Y ++ LC R ++A +L F +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL----FTEMEN 288
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
KG +++ Y +L+ LC+ + DA ++L ++ + + + + +G+ +E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ L +E + R P + +YS++ R+ E + + M +K +P++V Y +
Sbjct: 349 -AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K +DE +E+ E +G TV Y L+ G A + A M K+M G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSD-G 465
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEA 457
N TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ + PD+ +++++++ C
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + + ++N L+ + S++ A L +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 148 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ Q+G ++V Y ++ LC +G I A +L K+ ++A
Sbjct: 206 ASEAVALV----DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ LC +D A +L E +G P++ +YS++ L N R + ++L
Sbjct: 262 IYSTVIDSLCKYRHEDD---ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC- 378
+M + P++V + A + A K+G + EA E + +EM+K + P + Y+ L+ G C
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D + A M+ +SK C N TY L++G C+ R E + EM R
Sbjct: 378 HDRLDEA-KHMFELMISKD--CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G A M ++M+S P+I +++L+ +C N
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 23/382 (6%)
Query: 114 WTQSFNT-------LLKEMVKESKLEAAHILFLRSCYGWEVKSR----IQSLNLLMDVLC 162
W ++F++ +L+ + KL+ A LF G VKSR I N L+ +
Sbjct: 42 WGRAFSSGSGDYREILRNGLHSMKLDDAIGLF-----GGMVKSRPLPSIFEFNKLLSAIA 96
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ ++ DL + + ++M G + +Y+IL+ C +++ A LL M + G
Sbjct: 97 KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM----KLGYE 152
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
IV +LL C +I DA+ ++++++ G + P + + A +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTITFTTLIHGLFLHNKASEAVA 211
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L++ + RG P+L +Y + L G I +L++M ++V+Y + +L
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K D+AL + E KG P V Y+ L+ LC+ + A L M ++ N
Sbjct: 272 KYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPN 329
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C + EA E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 463 EMISQAKLPDISVWSSLVASVC 484
MIS+ P++ +++L+ C
Sbjct: 390 LMISKDCFPNVVTYNTLINGFC 411
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 152/308 (49%), Gaps = 7/308 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+++ LC+ +R D AL +EM +G PD Y+ ++ GLC + ++ EA L F ++
Sbjct: 15 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL----FEKM 70
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++ ++V Y TL+ LC +I+ A ++ +++ KG P + + +D
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY-VPTEVSYNTLIDGFCKKKD 129
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ AK + ++ + +P++ +Y+ + L G++ +VLD M KG P++ Y
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K VDEA +++E+ + +G PTV YNILL LC A A + M+ Q
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMA-Q 247
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
C TY L+ LC + A R+ EM+ + P TY+ L GL GK +E
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 307
Query: 457 AVMWLEEM 464
A +E+M
Sbjct: 308 AQELMEKM 315
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 7/296 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y +++ LC +R+++A + M + +G D IY +L LC + K+++
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEM----ATRGIKPDAFIYNFVLSGLCQEEKVEE 62
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A + EK++++ + P + + IE A L E +G +P+ SY+ +
Sbjct: 63 ARLLFEKMVKQRIN-PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 121
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ +V V D+M P++V Y + L K G V A EV+ + MVK
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL-DGMVKKGV 180
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+ L+ G C A L++M Q G TY IL++ LCR + +A
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ-GIAPTVVTYNILLNSLCRADKLEDAF 239
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
++ M R P V TYN L+R LC + A EMI++ PD + +L
Sbjct: 240 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
I+ A + + E RG P Y+ + L E ++ E + ++M + P++V Y
Sbjct: 25 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 84
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L K ++ A E+ +E KG +VPT YN L+ G C + A KM +
Sbjct: 85 LINGLCKAWRIETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 143
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
CV N TY L+DGL + G+ A+ VL+ M+ + P V TY+ LI G C + + E
Sbjct: 144 -NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 202
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A LE+M++Q P + ++ L+ S+C
Sbjct: 203 AHKLLEQMVTQGIAPTVVTYNILLNSLC 230
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P +Y + L RI + ++EM T+G P +Y L+ L ++ V
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+EA ++ E+MVK P V YN L+ GLC A A K+M+ + G V +Y
Sbjct: 61 EEA-RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYN 118
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DG C+ + A V ++M+ + P V TY LI GL GK A L+ M+ +
Sbjct: 119 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
P+++ +S L+ C ++ K LEQ+ +
Sbjct: 179 GVTPNVATYSCLIDGF-CKVRRVDEAHKLLEQMVT 212
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 41/280 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ RI E+ +M G + + T I + + L A +F
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + NCV ++ TL+ + K K++AA + L V + + + L+D C+
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV-LDGMVKKGVTPNVATYSCLIDGFCK 196
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A + ++M QG P +Y+IL+ LC +L +A + +F ++Q+
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA----FKLFRGMAQRRCHP 252
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y TLL ALC ++ A ++ +++ KG CP
Sbjct: 253 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG-------------CP------------- 286
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
P +Y +A L G++ E +++++M+
Sbjct: 287 ----------PDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I LS+S ++ EV+D M + ++ I + + +++EA L
Sbjct: 148 NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL 207
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N LL + + KLE A LF R + + N L+ LC
Sbjct: 208 EQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF-RGMAQRRCHPTVVTYNTLLRALCH 266
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------FWRI 216
++ D A ++ EM +GC PD +Y L GL +++EA L+ M F R
Sbjct: 267 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRS 326
Query: 217 SQ 218
SQ
Sbjct: 327 SQ 328
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 9/320 (2%)
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ + L + +EM +G P+ +Y+ ++ LC ++ EA +L M +G D
Sbjct: 203 KGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI----SEGIAPDG 258
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLI 284
VIY TL+ C G + A ++ +++ ++ + +P + +C C G +E K L
Sbjct: 259 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI-SPDFITYTAVICGLCQTGRVMEADK-LF 316
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E + + P +Y+A+ EG++ E + ++M G P++V Y A L K
Sbjct: 317 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 376
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G VD A E++ E KG + + YN L+ GLC AGN AV +K M + G +
Sbjct: 377 GEVDTANELLHEMCRKGLEL-NIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAV 434
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+D C+ + A +L +ML R P V T+NVL+ G C G + L+ M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + +P+ + ++SL+ C
Sbjct: 495 LEKGIMPNATTYNSLIKQYC 514
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 197/452 (43%), Gaps = 47/452 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
LK+ +E + K + N Y +I +L ++ ++ E + V+ +M + ++ T
Sbjct: 207 VLKLIEEMQIK--GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + G ++ A LF + ++ K+ I + G
Sbjct: 265 IDGFCKLGNVSSAYRLFDEM--------------------QKRKISPDFITYTAVICG-- 302
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
LCQ R A +F EM + PD +Y L+ G C + ++ EA
Sbjct: 303 --------------LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA- 347
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+S+ ++ Q G +IV Y L LC G++ A ++L ++ RKGL+ + +
Sbjct: 348 ---FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR-IVEGDKVLDEMRTK 325
C G +I+ A L+ + + G P +Y+ + +D Y + R +V ++L +M +
Sbjct: 405 VNGLCKAG-NIDQAVKLMKDMEVAGFHPDAVTYTTL-MDAYCKSREMVRAHELLRQMLDR 462
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V + + GM+++ ++++ + KG +P YN L+K C N
Sbjct: 463 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLIKQYCIRNNMRA 521
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ M + G V +G TY IL+ G C+ EA + +M+ + + V +YN LI
Sbjct: 522 TTEIYRGMCAK-GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+G K EA E+M + + D +++
Sbjct: 581 KGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 13/327 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+D C+ A +F EM + PD +Y ++ GLC R+ EA L + M +
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCND 273
+ D V Y L+ C +GK+++A + ++L+ GL P + LC C +
Sbjct: 324 LEP----DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL-TPNIVTYTALADGLCKCGE 378
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
++ A L++E +G ++ +Y+++ L G I + K++ +M GF P V
Sbjct: 379 ---VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + A K + A E++ + M+ PTV +N+L+ G C +G LK M
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQ-MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G + N TY L+ C + + M + P TYN+LI+G C
Sbjct: 495 LEK-GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 553
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLV 480
EA +M+ + +S +++L+
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALI 580
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K+++EM+ KG P+ Y + L K G V EA V+ E M+ P +Y L+ G
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE-MISEGIAPDGVIYTTLIDG 267
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C GN + A +M K+ + TY ++ GLC+ GR +EA ++ EM+ + P
Sbjct: 268 FCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTADL----- 490
TY LI G C GK EA +M+ P+I +++L +C C D
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
Query: 491 -NVCRKTLE 498
+CRK LE
Sbjct: 387 HEMCRKGLE 395
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 156/372 (41%), Gaps = 47/372 (12%)
Query: 26 TALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
+A ++F E +++ P++ Y ++I L ++ R+ E ++ +M E + +
Sbjct: 276 SAYRLFDEMQKRKISPDF----ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
I Y + G++ EA SL + Q ++ L + K +++ A+ L C
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 144 -GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G E+ I + N L++ LC+ D A+ + ++M+ G +PD +Y LM C R +
Sbjct: 392 KGLELN--IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK----- 257
A LL M R Q +V + L+ C G ++D ++L+ +L KG+
Sbjct: 450 VRAHELLRQMLDRELQP----TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 258 -----------------------------APKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
P + I + +++ A L + +
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 565
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+G +++SY+A+ Y + +E ++ ++MR +G +Y + +G ++
Sbjct: 566 GKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625
Query: 349 EALEVIEEEMVK 360
LE+ +E + K
Sbjct: 626 LTLELCDEAIEK 637
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 99/230 (43%), Gaps = 7/230 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+ K+ + + + Y +++ +S + E++ QM + F
Sbjct: 417 AVKLMKDME--VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 474
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + +G L + L K + + + ++N+L+K+ + + A ++ C
Sbjct: 475 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 534
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + N+L+ C+ R A + ++M +G SY+ L+KG ++ EA
Sbjct: 535 VPDG-NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
L F ++ ++G D IY D+GK++ +++ ++ + K L
Sbjct: 594 EL----FEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 639
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R+++ G D+ Y LL LCD+ + Q+A+++L +
Sbjct: 147 MDIV---LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM-------------- 189
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+D G G P + SY+ + + EG + EM +
Sbjct: 190 --------ADDRGG-----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + +AAL K +D+A+EV+ MVK +P YN +L G C +G
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ LKKM + G N TY L++ LC++GR EA ++ + M R P + TY L+
Sbjct: 290 AIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G + G E L+ M+ PD V++ L+
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 184/422 (43%), Gaps = 48/422 (11%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGWEVKSRIQSLNLL 157
+ + +++ C+ S+N LLK + E++ LE H++ G + S N +
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM--ADDRGGGSPPDVVSYNTV 207
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ + SD A + EM +G PD +Y ++ LC + +++A +L +M
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV---- 263
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G D + Y ++L C G+ ++A+ L+K+ G++ + C +G
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD----------------- 320
E A+ + + RG P +A+Y + +G +VE +LD
Sbjct: 324 E-ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382
Query: 321 ------------------EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+MR G P++V Y + L K G VD+A+ + E+M+
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEG 441
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P + VY L+ GLC A + +M + C+ N + ++D C++GR +E+
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIES 500
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ + M+ P + TYN LI G C GK EA L M+S PDI + +L+
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 483 VC 484
C
Sbjct: 561 YC 562
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 154/329 (46%), Gaps = 5/329 (1%)
Query: 157 LMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC +R+ A+ V + M GC PD SY+ L+KGLC++ R EA LL+ M
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH-MMAD 191
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
GS D+V Y T+L +G A ++L +G+ I C +
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK-AQ 250
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
++ A ++N + G +P +Y+++ + G+ E L +MR+ G P++V Y
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + L K+G EA ++ + M K P + Y LL+G G + V + L +
Sbjct: 311 SLMNYLCKNGRSTEARKIF-DSMTKRGLEPDIATYRTLLQGYATKG-ALVEMHALLDLMV 368
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + + IL+ + + +A V +M P V Y +I LC G
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+++ E+MI + P+I V++SL+ +C
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 189/441 (42%), Gaps = 57/441 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ L ++ R TE +++ D M E + + T ++ YA G L E +L
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------L 156
+ + FN L+ K+ K++ A ++F K R LN
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF--------SKMRQHGLNPNVVCYGT 416
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++DVLC+ D A+ F++M +G P+ Y L+ GLC + ++A L+ M R
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR- 475
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
G + + + +++ + C +G++ ++ ++ + ++R G+K
Sbjct: 476 ---GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK------------------- 513
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
P + +Y+ + G++ E K+L M + G P +V Y
Sbjct: 514 -----------------PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ + +D+AL + +E MV P + YNI+L+GL +A A ++K
Sbjct: 557 LINGYCRVSRMDDALALFKE-MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G TY I++ GLC++ EA R+ + + + T+N++I L G+ E
Sbjct: 616 -GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674
Query: 457 AVMWLEEMISQAKLPDISVWS 477
A + +PD+ +S
Sbjct: 675 AKDLFAAHSANGLVPDVRTYS 695
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 196/433 (45%), Gaps = 11/433 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGD--SCECKDSV-FATAIRTYARAGQLNEAVSLFK 104
Y +++ L + NR E E++ M D D V + T + + + G ++A S +
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++++++ + K ++ A + L + V + N ++ C
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKA-MEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ A+ ++M G P+ +Y LM LC + R EA + SM +++G D
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM----TKRGLEPD 340
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
I YRTLL +G + + +L+ ++R G++ P I +C E ++ A +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQ-PDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
++ G P++ Y + L G + + ++M +G P++++Y + + L
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D+A E+I E + +G + T+ +N ++ C G + L + ++G +
Sbjct: 460 DKWDKAEELILEMLDRGICLNTI-FFNSIIDSHCKEGR-VIESEKLFDLMVRIGVKPDII 517
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+DG C G+ EA+++L M+ P + TY LI G C + + +A+ +EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 465 ISQAKLPDISVWS 477
+S P+I ++
Sbjct: 578 VSSGVSPNIITYN 590
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + GR+ G L + KGF + + L L D +A+++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVD 411
+ M + +P V YN LLKGLCD S A+ L M+ G + + +Y +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G ++G +A EML R P V TY+ +I LC +A+ L M+ +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 472 DISVWSSLVASVC 484
D ++S++ C
Sbjct: 270 DCMTYNSILHGYC 282
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 40/163 (24%)
Query: 361 GTFVPTVRVYNI-----------------------------------LLKGLC-DAGNSA 384
G PTV Y I LLKGLC D S
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR---SYWPCVETY 441
+ L++M+ ++GC+ + +Y L+ GLC + R EA +L M P V +Y
Sbjct: 146 AMDIVLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N ++ G G +A EM+ + LPD+ +SS++A++C
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC 247
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 40/198 (20%)
Query: 82 VFATAIRTYARAGQLNEAVSLFK---------NLSQFNCV-------------------- 112
+ T I Y R ++++A++LFK N+ +N +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 113 --NWTQ----SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ TQ ++N +L + K + + A +F C +++ ++ N+++ L +C R
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKCGR 671
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F G PD +Y ++ + L L E L +F + + G D
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE----LDDLFLSMEENGCSADSR 727
Query: 227 IYRTLLFALCDQGKIQDA 244
+ +++ L +G I A
Sbjct: 728 MLNSIVRKLLQRGDITRA 745
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 199/450 (44%), Gaps = 50/450 (11%)
Query: 10 TPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
TP ++ ++K+ P AL+ F + Y H+ + I I + + + +
Sbjct: 55 TPNLVNSVLKRLWNHGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I +M+ FA YA AG+ ++AV LF N+ + C SFNT+L + K
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++E A+ LF R+ G + N++++ C +R+ AL V +EM +G P+
Sbjct: 174 SKRVEKAYELF-RALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ ++KG ++ A + F + ++ D+V Y T++ G+I+ A +
Sbjct: 232 TYNTMLKGFFRAGQIRHA----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++R+G+ +PS+A+Y+AM L
Sbjct: 288 FDEMIREGV------------------------------------LPSVATYNAMIQVLC 311
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ + + +EM +G+ P++ Y + LF G E+++ +G P
Sbjct: 312 KKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC-EPNF 370
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---RDGRFLEASR 424
+ YN++++ + A+ +KM C+ N +TY IL+ G+ R + A +
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSG-DCLPNLDTYNILISGMFVRKRSEDMVVAGK 429
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+L EM+ R + P T+N ++ GL G Q
Sbjct: 430 LLLEMVERGFIPRKFTFNRVLNGLLLTGNQ 459
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 52/348 (14%)
Query: 145 WEVKSRIQSLNL---------LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
W + R++SL + + + + D A+ +F M GC+ D S++ ++
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC +R+ +A L ++ R S D V Y +L C + A+++L++++ +G
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSV-----DTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P+L +Y+ M + G+I
Sbjct: 226 IN------------------------------------PNLTTYNTMLKGFFRAGQIRHA 249
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM+ + +V Y + G + A V +E M++ +P+V YN +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE-MIREGVLPSVATYNAMIQ 308
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC N AV+ ++M ++ G N TY +L+ GL G F +++ M
Sbjct: 309 VLCKKDNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P +TYN++IR + +A+ E+M S LP++ ++ L++ +
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +++ +A + G+ + K+ M G + L + L L K V++A E+
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++G F YN++L G C + A+ LK+M ++ G N TY ++ G
Sbjct: 184 FRA--LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-GINPNLTTYNTMLKGF 240
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G+ A EM R V TY ++ G G+ A +EMI + LP +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 474 SVWSSLVASVC 484
+ +++++ +C
Sbjct: 301 ATYNAMIQVLC 311
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 204/481 (42%), Gaps = 48/481 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I +L + R+ E KE +++M + ++ + I Y + G + A+ +FK +
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++ +L+ ++++ KL A L + + + + L+ C+
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVIAYTTLIQGQCKKHEF 544
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-----------THLLYS----- 211
D A +F+ M+ G PD ++Y++L LC R EA T + Y+
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604
Query: 212 ------------MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ ++ +G D+ Y LL ALC Q K+ +A+ IL+++ G+K
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I +G+ + AKSL NE + G PS +Y+ G+I E + ++
Sbjct: 665 IVAYTIIISEMIKEGKH-DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLI 723
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK---- 375
EM G P +V Y + G +D A ++ MV + P Y +LLK
Sbjct: 724 GEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR-MVDASCEPNCWTYWLLLKHFLK 782
Query: 376 -GLCDAGNSAVAVMY-----------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
L +A + M+ L++M K G TY ++ G C+ R EA
Sbjct: 783 MSLINAHYIDTSGMWNWIELNTVWQLLERMMKH-GLNPTVVTYSSIIAGFCKATRLEEAC 841
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L+ ML ++ P E Y +LI+ C I + V ++ +MI P + + L+ +
Sbjct: 842 VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901
Query: 484 C 484
C
Sbjct: 902 C 902
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 220/537 (40%), Gaps = 71/537 (13%)
Query: 9 LTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSE-------- 57
+T +++ + + SPL TAL F E + P +RH +A+++ +L+
Sbjct: 48 VTAAHVADLFRAPVSPLDPATALAFF-EWVARRPGFRHTAASHAALLQLLARRRAPANYD 106
Query: 58 ---------SNRITEMKEVIDQMK------GDSCECKDSVFATAIRTYARAGQLNEAVSL 102
S +++E +D ++ G + A+R+ R L
Sbjct: 107 KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ +L Q + T ++NT++ K+ L AH F C E ++ + +L
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYF---CLLRESGMQMDTYTCNALLLG 223
Query: 163 QCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
CR SDL A + M GC + SY IL++GL R + EA L++ M Q G
Sbjct: 224 YCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMV----QDG 279
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------KSRRHRIDL 268
++ +Y L+ LC +G+I DA +L+++ +G+ KS R + L
Sbjct: 280 CSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 339
Query: 269 ----------CPCND-----------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
C +D G ++ A+ L+N A+ RG P++ +++ +
Sbjct: 340 GIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYC 399
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
RI + +V M + L Y + L K + EA E + E G P V
Sbjct: 400 KAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG-LAPNV 458
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+Y ++ G C G A+ K M + GC N TYG L+ GL +D + +A ++
Sbjct: 459 VIYTSIIDGYCKVGMVGAALEVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+M P V Y LI+G C + A E M PD ++ L ++C
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 188/441 (42%), Gaps = 12/441 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y +I L + RI + + ++D+M + I Y ++G++ +A+ +
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ Q C ++N+L+ + EA +L G+ + + L++ C+
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGF--TPTVITFTNLINGYCK 400
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D AL V M C D ++Y +L+ L RL EA L MF G
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF----ANGLAP 456
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++VIY +++ C G + A+++ + + +G P + + + + + A +L
Sbjct: 457 NVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCH-PNAWTYGSLIYGLIQDKKLHKAMAL 515
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I + G P + +Y+ + + ++ + M G P Y AL K
Sbjct: 516 ITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCK 575
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +EA +V+ V T Y L+ G AGN+ A + ++KM + GC A+
Sbjct: 576 SGRAEEAYSF----LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADL 630
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY +L+ LC+ + EA +L++M + + Y ++I + GK A E
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690
Query: 464 MISQAKLPDISVWSSLVASVC 484
MIS P + ++ ++S C
Sbjct: 691 MISSGHKPSATTYTVFISSYC 711
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 38/386 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ + + +++AG + A L + + C +++ LL+ + K+ KL EA IL
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ G VK I + +++ + + + D A +F EM G P +Y + + C
Sbjct: 657 TVSG--VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK---------- 250
++ EA HL+ M + G D+V Y + G + A L++
Sbjct: 715 QIEEAEHLIGEM----ERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNC 770
Query: 251 -----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L+ LK H ID + ++ L+ + G P++ +YS++
Sbjct: 771 WTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAG 830
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
R+ E +LD M K P+ +Y + + + + + + M++ F P
Sbjct: 831 FCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTD-MIEFGFQP 889
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG-------ILVDGLCRDGR 418
+ Y+ L+ GLCD G+ A K + C G Y IL DGL + G
Sbjct: 890 QLESYHYLIVGLCDEGDYDRA--------KSLFCDLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVL 444
S++L M R E+Y++L
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSML 967
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y IL++GL +A + L M Q GC N Y +L+ GLC++GR +A +L+EM
Sbjct: 252 YTILIQGLYEA-RCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEM 310
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+R P V TYN +I G C G+ +A+ M PD ++SL+ +C D
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLD 370
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S+I ++ R+ E ++D M G + + ++ I+ + VS ++
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDM 882
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+F +S++ L+ + E + A LF G + + +L D L +
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFC-DLLGMDYNHNEVAWKILNDGLLKAGH 941
Query: 167 SDLALHVFQEMDFQGCYPDRESYHIL 192
D + MD + C D ESY +L
Sbjct: 942 VDFCSQLLAAMDNRHCRIDSESYSML 967
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 181/382 (47%), Gaps = 9/382 (2%)
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN--LLMDVLCQ 163
LS V S+NT+L + ++ L+AA L + + SR +++ LM LC
Sbjct: 47 LSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCA 106
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR+ A+ + + M G PD +Y L++GLC+ ++ A LL M + G
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM----CESGIEP 162
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V+Y LL C G+ + ++ E++ +G++ + C G+ ++ A +
Sbjct: 163 NVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGK-VKKAARV 221
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++ RG P++ +Y+ + + EG + E + M KG P +V Y + L
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281
Query: 344 DGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+DEA+ ++EE M T V P + +N ++ GLC G A + ++ M + GC N
Sbjct: 282 VLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQA-LQVRAMMAENGCRCN 340
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+ +L+ GL R + +A +++EM P TY++LI G C + + A +L
Sbjct: 341 LVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLS 400
Query: 463 EMISQAKLPDISVWSSLVASVC 484
EM Q P+ + L+ ++C
Sbjct: 401 EMRHQGMEPEPVHYIPLLKAMC 422
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 200/451 (44%), Gaps = 35/451 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + E++++M E V++ + Y + G+ +F+ +
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM 190
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
S + L+ + + K++ AA ++ + + G E + + N+L++ +C+
Sbjct: 191 SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE--PNVVTYNVLINSMCKEG 248
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
AL + + M +G PD +Y+ L+ GL + ++EA LL M + D+
Sbjct: 249 SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ--GETRVRPDL 306
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN------------D 273
+ + +++ LC G ++ A+Q+ + G C CN
Sbjct: 307 MTFNSVIHGLCKIGWMRQALQVRAMMAENG-------------CRCNLVAFNLLIGGLLR 353
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDEMRTKGFWPSLV 332
++ A L++E G P +YS + I+ + + R VE + L EMR +G P V
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSIL-INGFCKMRQVERAESYLSEMRHQGMEPEPV 412
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L A+ GM+ +A ++ E M + + Y+ ++ G +G +A +LK
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAA-AYSTMIHGAFKSGEKKIAEEFLKD 470
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + G + + TY I ++ + G A RVL++M + P V ++ LI+G + G
Sbjct: 471 MIDE-GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKG 529
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + EM ++ D + S++V S+
Sbjct: 530 DTEKILELTREMTAKDVALDPKIISTIVTSL 560
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 185/448 (41%), Gaps = 25/448 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ L R + ++ M+ + T IR A ++ AV
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + ++ LL K + E+ +F G ++ + L+D L
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF-EEMSGRGIEPDVVMYTALIDSL 209
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A V M +G P+ +Y++L+ +C + + EA L +M S+KG
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNM----SEKGV 265
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+V Y TL+ L ++ +AM +LE++++ R R DL N I G
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQG------ETRVRPDLMTFN--SVIHGLC 317
Query: 282 SL--INEAL-IRGGIP------SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ + +AL +R + +L +++ + L ++ + +++DEM + G P
Sbjct: 318 KIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSF 377
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K V+ A E EM P Y LLK +CD G A +
Sbjct: 378 TYSILINGFCKMRQVERA-ESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE 436
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + C + Y ++ G + G A L++M+ P TY++ I G
Sbjct: 437 MDRN--CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSG 494
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
A L++M + +PD++V+ SL+
Sbjct: 495 DLAAAERVLKQMTASGFVPDVAVFDSLI 522
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 233/551 (42%), Gaps = 89/551 (16%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSE--- 57
R +T +++ + + +PL TAL F E + P +RH +A+++ +L+
Sbjct: 47 RLAPFVTAAHVADLFRAPVAPLDPATALAFF-EWVARRPGFRHTAASHAALLQLLARRRA 105
Query: 58 --------------SNRITEMKEVIDQMK------GDSCECKDSVFATAIRTYARAGQLN 97
S +M+E +D ++ G + A+R+ R
Sbjct: 106 PANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTE 165
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLN 155
L+ L Q + T ++NT++ KE L AH F LR G E+ + + N
Sbjct: 166 HMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRES-GMEMDT--YTCN 222
Query: 156 LLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+ L CR DL A + M GC + SY IL++GLC R + EA LL M
Sbjct: 223 ALL--LGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMML 280
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP------------KS 261
Q G ++ Y L+ LC +G+I DA +L+++ R+G+ KS
Sbjct: 281 ----QDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKS 336
Query: 262 RRHRIDL----------CPCND-----------GEDIEGAKSLINEALIRGGIPSLASYS 300
R + L C +D G + A+ L+N A+ RG P++ +++
Sbjct: 337 GRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFT 396
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPS------LVMYEAKLAALFKDGMVDEALEVI 354
+ I+ Y + +K+ D +R K S L Y ++ L K + EA + +
Sbjct: 397 NI-INGY-----CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL 450
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E G P V +Y ++ C G A+ K+++ GC N TY L+ GL
Sbjct: 451 NEIFANG-LSPNVVIYTSIIDAYCKVGKVGAALEVF-KLTEHEGCRPNAWTYSSLIYGLI 508
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDI 473
+D + +A ++ +M P V TY LI+G C +++ L EM+ Q L PD
Sbjct: 509 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK-KHEFDNAFRLFEMMEQNGLTPDE 567
Query: 474 SVWSSLVASVC 484
++ L ++C
Sbjct: 568 QAYNVLTDALC 578
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 201/482 (41%), Gaps = 48/482 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I +L + +R+ E K+ ++++ + ++ + I Y + G++ A+ +FK
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++++L+ ++++ KL A L + + + + L+ C+
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQCKKHE 547
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA--------------------- 205
D A +F+ M+ G PD ++Y++L LC R EA
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVD 607
Query: 206 -------THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
T ++ ++ +G D Y LL ALC Q K+ +A+ IL+++ +G+K
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
I +G+ + AKS+ NE + G PS +Y+ GRI E +
Sbjct: 668 NIVAYTIIISEMIKEGKH-DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHL 726
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK--- 375
+ EM G P +V Y + G +D A ++ M+ + P Y +LLK
Sbjct: 727 IGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR-MIDASCEPNYWTYWLLLKHFL 785
Query: 376 --GLCDAGNSAVAVMY-----------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
L +A + M+ L++M K G TY ++ G C+ R EA
Sbjct: 786 KMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH-GLNPTAVTYSSIIAGFCKATRLEEA 844
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+L+ ML + P E Y +LI+ C I +A ++ MI P + + L+
Sbjct: 845 CVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITG 904
Query: 483 VC 484
+C
Sbjct: 905 LC 906
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 191/444 (43%), Gaps = 18/444 (4%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L + RI + + ++D+M + I Y ++G+L +A+ +
Sbjct: 287 NLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI- 345
Query: 104 KNLSQFNCVN---WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
K L + N N WT +N+L+ + EA +L G+ + + +++
Sbjct: 346 KTLMEGNGCNPDDWT--YNSLIHGLCGGKPDEAEELLNGAIARGFS--PTVITFTNIING 401
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ + D AL V M C D ++Y +L+ L RL EA L +F G
Sbjct: 402 YCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIF----ANG 457
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++VIY +++ A C GK+ A+++ + +G + P + + + + + A
Sbjct: 458 LSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCR-PNAWTYSSLIYGLIQDQKLHKA 516
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+LI + G P + +Y+ + + ++ + M G P Y A
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G +EA +VK V T Y L+ G AGN+ A ++KM + GC
Sbjct: 577 LCKSGRAEEAYSF----LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNE-GCK 631
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
A+ TY +L+ LC+ + EA +L++M +R + Y ++I + GK A
Sbjct: 632 ADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSM 691
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
EMIS P ++ ++S C
Sbjct: 692 FNEMISSGHKPSAITYTVFISSYC 715
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 163/394 (41%), Gaps = 24/394 (6%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ + + +++AG A +L + + C + +++ LL+ + K+ KL EA IL
Sbjct: 601 TYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ G VK I + +++ + + + D A +F EM G P +Y + + C
Sbjct: 661 TLRG--VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG 718
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK---------- 250
R+ EA HL+ M + G D+V Y + G + A L++
Sbjct: 719 RIEEAGHLIGEM----ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNY 774
Query: 251 -----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L+ LK + H +D + ++ L+ + G P+ +YS++
Sbjct: 775 WTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAG 834
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
R+ E +LD M K P+ +Y + + ++A + M++ F P
Sbjct: 835 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN-MIECGFQP 893
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ Y+ L+ GLCD G+ A + ++ N + IL DGL + G S++
Sbjct: 894 HLESYHYLITGLCDEGDYDKAKALFCDL-LEMDYNHNEVAWKILNDGLLKAGHVDICSQL 952
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
L M R ETY+++ + YE+ M
Sbjct: 953 LSAMENRHCRIDSETYSMVTNNIHEASGMYESYM 986
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 5/297 (1%)
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ T + ++ ++ Q+G D V Y T++ A C +G + A + + G++
Sbjct: 162 DMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTC 221
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + L C G D+ A L+ + G + SY+ + L + E +L M
Sbjct: 222 NALLLGYCRTG-DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMML 280
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P+L Y + L K+G + +A V+ +EM + VP+V YN ++ G C +G
Sbjct: 281 QDGCSPNLHTYTLLIRGLCKEGRIHDA-RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRL 339
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A + +K + + GC + TY L+ GLC G+ EA +L + R + P V T+
Sbjct: 340 KDA-LGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTN 397
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G C K +A+ MIS D+ + L+ SV L + TL ++
Sbjct: 398 IINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLI-SVLIKKHRLKEAKDTLNEI 453
>gi|224122828|ref|XP_002318926.1| predicted protein [Populus trichocarpa]
gi|222857302|gb|EEE94849.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 210/476 (44%), Gaps = 48/476 (10%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P YL +++K +A+K+FK A + + H Y +I L + + EM+
Sbjct: 57 LCPDYLIKVLKSTSDINSAVKLFKWASLQR-RFNHTDDTYYWIIFKLGMAENVEEMEGFC 115
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
M D C + V + + + R +LNEA+ + N++ FN +L +V+E
Sbjct: 116 QNMVKDRCPGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEE 175
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ + + V I +LN L++VL + R D AL ++ ++ +GC P+ +
Sbjct: 176 KRGFQDVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRT 235
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
+ I++KGL R++++ +L+ M + G ++ +R+ + C + ++Q +++
Sbjct: 236 FEIVIKGLIAKNRVDDSVTILHEML----ELGCLPELRFFRSTILLFCGEDRLQQGIRLF 291
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
K+ P Y A+ L
Sbjct: 292 RKMKDSNFT------------------------------------PDPFIYGALIQCLCK 315
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
R+ E +L+EM P ++ + K G ++EA++++E++ V T
Sbjct: 316 HLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLLEDKHVHVT-----S 370
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+N LL+ CDA +A L+KMS++ + + +++ IL+ LC + A +L
Sbjct: 371 PHNALLRCCCDADKFFMAKGLLEKMSERN--IDDCDSWNILIRWLCEKVGVMNAYELLGR 428
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+I S P TY+ L+ G C + K +A+ ++ ++ + D + +S L+ +C
Sbjct: 429 MIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSELIEGLC 484
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMR---TKGFWPSLVMYEAKL 338
+ + +++ G+ PS+ + + + L+ R+ D LD+ R KG P+ +E +
Sbjct: 184 FVYKEMVKAGVAPSIDTLNYLLEVLFETDRV---DSALDQYRRINKKGCIPNSRTFEIVI 240
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L VD+++ ++ E + G +P +R + + C + +KM K
Sbjct: 241 KGLIAKNRVDDSVTILHEMLELGC-LPELRFFRSTILLFCGEDRLQQGIRLFRKM-KDSN 298
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ YG L+ LC+ R EA+ +LEEM+ P + ++ G C +GK EA+
Sbjct: 299 FTPDPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAI 358
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
LE+ P + + CC+ + + LE++S
Sbjct: 359 KLLEDKHVHVTSP-----HNALLRCCCDADKFFMAKGLLEKMS 396
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 180/457 (39%), Gaps = 52/457 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+++F++ K+ N+ + +Y ++I L + R+ E ++++M ++VF
Sbjct: 287 GIRLFRKMKDS--NFTPDPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDI 344
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + + G++NEA+ L ++ K + + H LR C
Sbjct: 345 VNGFCKLGKINEAIKLLED---------------------KHVHVTSPHNALLRCC---- 379
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
C + +A + ++M + D +S++IL++ LC + A
Sbjct: 380 ---------------CDADKFFMAKGLLEKMSERN-IDDCDSWNILIRWLCEKVGVMNA- 422
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHR 265
Y + R+ D Y L+ C K +DA+Q+ ++ K + P S
Sbjct: 423 ---YELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSEL 479
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
I+ C + +E K + R + SL S++ + + N G + E ++
Sbjct: 480 IE-GLCRGEKYLEAVKVFCYMSENRCSLQSL-SFNMLIEGVCNMGMLNEAVRLQLLGYNS 537
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G S + L K L + + +V+GT + + Y IL++ +
Sbjct: 538 GTSCSNATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNL-DMEAYCILIQSMIAQKQIKD 596
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
++L M + G V + +T L+ L + S L++++ YN+LI
Sbjct: 597 CTLFLNVMVNE-GLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILI 655
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
GL G + EA L+ M+ + +PD L+ S
Sbjct: 656 NGLWKEGNKNEAHRLLDLMLEKGWVPDSMTHGLLIGS 692
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 125/295 (42%), Gaps = 47/295 (15%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+++ L+ + SK E A LFL+ W + S + L++ LC+ + A+ VF
Sbjct: 440 TYSALVAGNCRLSKYEDALQLFLQLHAKFWILDP--ASYSELIEGLCRGEKYLEAVKVFC 497
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHL--------------------------- 208
M C S+++L++G+CN LNEA L
Sbjct: 498 YMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSCSNATCNYIMLGLSKSD 557
Query: 209 ----LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
+ + ++ +G+ D+ Y L+ ++ Q +I+D L ++ +GL +
Sbjct: 558 KGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFLNVMVNEGLVPDSDTLY 617
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
++ C N + + SL ++ + + A Y+ + L+ EG E ++LD M
Sbjct: 618 KLLSCLANHSQLYLISLSL-DKLVSDCEVLDSAMYNILINGLWKEGNKNEAHRLLDLMLE 676
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR--VYNILLKGL 377
KG+ P + + + + ++G L T+V +++ V +IL++GL
Sbjct: 677 KGWVPDSMTHGLLIGSGNREGTGKGKL----------TYVDSIKDSVSDILVEGL 721
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 28/417 (6%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
++ R AG+ +A S+ + + + T +++ +L + SK+E A +LF
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V + + + +++D C+ + A F EM GC P+ +Y L+ ++++
Sbjct: 512 GGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L +M +G +IV Y L+ C G+++ A QI E+
Sbjct: 571 YANELFETML----SEGCLPNIVTYSALIDGHCKAGQVEKACQIFER------------- 613
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+C D D++ ++ R P++ +Y A+ R+ E K+LD M
Sbjct: 614 ----MCGSKDVPDVDMYFKQYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ ++Y+A + L K G +DEA EV + EM + F T+ Y+ L+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+A L KM + C N Y ++DGLC+ G+ EA ++++ M + P V TY
Sbjct: 726 DLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G IGK + LE M S+ P+ + L+ CC L+V LE++
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH-CCKNGALDVAHNLLEEM 840
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 227/590 (38%), Gaps = 121/590 (20%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ + + ++++ P + F A + Y+H PVY +++ ++ + +E +
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQI-GYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
Q++ D E +R + R G + A+ L F ++N L++ +K
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 129 SKLEAAHIL-------------FLRSCYGW---------EVKSRIQSLNLLMDV------ 160
+L++A ++ F C+ + E + +++ N + D
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKL 308
Query: 161 ---LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
LC+ + A+ M C P+ +Y L+ G N ++L +L
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALC-DQGKIQ-DA 244
Y + ++ + G V+Y L+ ++C D+ + D
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 245 MQILEK----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ + EK +L G+ K C C+ G+ E A S+I E + +G IP ++YS
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYS 487
Query: 301 -------------------------AMAIDLYN----------EGRIVEGDKVLDEMRTK 325
+ D+Y G I + K +EMR
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + A K V A E+ E + +G +P + Y+ L+ G C AG
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEK 606
Query: 386 AVMYLKKM--SKQVGCV-------------ANGETYGILVDGLCRDGRFLEASRVLEEML 430
A ++M SK V V N TYG L+DG C+ R EA ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P Y+ LI GLC +GK EA EM + +SSL+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 193/466 (41%), Gaps = 28/466 (6%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+ + Y +I L E++ E + +++M+ SC ++T + QL
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + C + FN+L+ A+ L + + + N+L+
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV-VYNILIG 415
Query: 160 VLC------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+C C DLA + EM G ++ + + LC+ + +A +S+
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA----FSVI 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ +G D Y +L LC+ K++ A + E++ R GL A + C
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G IE A+ NE G P++ +Y+A+ ++ +++ + M ++G P++V
Sbjct: 532 GL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 334 YEAKLAALFKDGMVDEALEVIE---------------EEMVKGTFVPTVRVYNILLKGLC 378
Y A + K G V++A ++ E ++ + P V Y LL G C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A L MS + GC N Y L+DGLC+ G+ EA V EM + +
Sbjct: 651 KSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI + +Q A L +M+ + P++ +++ ++ +C
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 34/462 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y M+ ++ I + ++ ++M+ C + I Y +A +++ A LF+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV---------------KSRI 151
C+ +++ L+ K ++E A +F R C +V + +
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D C+ R + A + M +GC P++ Y L+ GLC +L+EA +
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--RRHRID-L 268
M S+ G + Y +L+ + A ++L K+L AP ID L
Sbjct: 700 M----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEMIDGL 754
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C ++ ++ E +G P++ +Y+AM G+I ++L+ M +KG
Sbjct: 755 CKVGKTDEAYKLMQMMEE---KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAV 387
P+ V Y + K+G +D A ++EE +K T PT Y +++G +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEE--MKQTHWPTHTAGYRKVIEGF---NKEFIES 866
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS--YWPCVETYNVLI 445
+ L Q Y +L+D L + R A R+LEE+ S TYN LI
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
LC K A EM + +P++ + SL+ + N+
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ +S+R+ E ++++D M + CE V+ I + G+L+EA
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-- 693
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+E K E + F + Y + + L+D
Sbjct: 694 -------------------------QEVKTEMSEHGFPATLYTY---------SSLIDRY 719
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +R DLA V +M C P+ Y ++ GLC + +EA Y + + +KG
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA----YKLMQMMEEKGC 775
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y ++ GKI+ +++LE++ KG+ AP +R+ + C ++ A
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAH 834
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L+ E + + P+ + I+ +N+ +E +LDE+ P L +Y + L
Sbjct: 835 NLLEE-MKQTHWPTHTAGYRKVIEGFNK-EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 342 FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K ++ AL ++EE T V YN L++ LC A A +M+K+ G +
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK-GVI 951
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLE 427
+++ L+ GL R+ + EA +L+
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 294 PSLASYSAM-----AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
PS ++Y+ + D + ++ + L +R GF Y +L K G
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-----SLCKVGKWR 287
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EAL ++E E FVP Y L+ GLC+A A+ +L +M + C+ N TY
Sbjct: 288 EALTLVETE----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRM-RATSCLPNVVTYST 342
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G + RVL M++ +P + +N L+ C+ G A L++M+
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 469 KLPDISVWSSLVASVCCNTADLN 491
+P V++ L+ S+C + LN
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLN 425
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PNY Y +I ++ + ++++MK + + I + + + E
Sbjct: 812 PNY----VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIE 865
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLL 157
++ L + Q + + + L+ ++K +LE A +L + + + + N L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ LC + + A +F EM +G P+ +S+ L+KGL + +++EA LL
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 28/417 (6%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
++ R AG+ +A S+ + + + T +++ +L + SK+E A +LF
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 470
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V + + + +++D C+ + A F EM GC P+ +Y L+ ++++
Sbjct: 471 GGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L +M +G +IV Y L+ C G+++ A QI E+
Sbjct: 530 YANELFETML----SEGCLPNIVTYSALIDGHCKAGQVEKACQIFER------------- 572
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+C D D++ ++ R P++ +Y A+ R+ E K+LD M
Sbjct: 573 ----MCGSKDVPDVDMYFKQYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMS 625
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ ++Y+A + L K G +DEA EV + EM + F T+ Y+ L+
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+A L KM + C N Y ++DGLC+ G+ EA ++++ M + P V TY
Sbjct: 685 DLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 743
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G IGK + LE M S+ P+ + L+ CC L+V LE++
Sbjct: 744 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH-CCKNGALDVAHNLLEEM 799
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 227/590 (38%), Gaps = 121/590 (20%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ + + ++++ P + F A + Y+H PVY +++ ++ + +E +
Sbjct: 89 LSESLVIEVLRLIARPSAVISFFVWAGRQI-GYKHTAPVYNALVDLIVRDDDEKVPEEFL 147
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
Q++ D E +R + R G + A+ L F ++N L++ +K
Sbjct: 148 QQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 207
Query: 129 SKLEAAHIL-------------FLRSCYGW---------EVKSRIQSLNLLMDV------ 160
+L++A ++ F C+ + E + +++ N + D
Sbjct: 208 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKL 267
Query: 161 ---LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
LC+ + A+ M C P+ +Y L+ G N ++L +L
Sbjct: 268 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 327
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALC-DQGKIQ-DA 244
Y + ++ + G V+Y L+ ++C D+ + D
Sbjct: 328 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDL 387
Query: 245 MQILEK----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ + EK +L G+ K C C+ G+ E A S+I E + +G IP ++YS
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYS 446
Query: 301 -------------------------AMAIDLYN----------EGRIVEGDKVLDEMRTK 325
+ D+Y G I + K +EMR
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 506
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + A K V A E+ E + +G +P + Y+ L+ G C AG
Sbjct: 507 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEK 565
Query: 386 AVMYLKKM--SKQVGCV-------------ANGETYGILVDGLCRDGRFLEASRVLEEML 430
A ++M SK V V N TYG L+DG C+ R EA ++L+ M
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P Y+ LI GLC +GK EA EM + +SSL+
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 194/466 (41%), Gaps = 28/466 (6%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+ + Y +I L E++ E + +++M+ SC ++T + QL
Sbjct: 256 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 315
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + C + FN+L+ A+ L + + + N+L+
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV-VYNILIG 374
Query: 160 VLCQCRRS------DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+C + S DLA + EM G ++ + + LC+ + +A +S+
Sbjct: 375 SICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA----FSVI 430
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ +G D Y +L LC+ K++ A + E++ R GL A + C
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G IE A+ NE G P++ +Y+A+ ++ +++ + M ++G P++V
Sbjct: 491 GL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 549
Query: 334 YEAKLAALFKDGMVDEALEVIE---------------EEMVKGTFVPTVRVYNILLKGLC 378
Y A + K G V++A ++ E ++ + P V Y LL G C
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A L MS + GC N Y L+DGLC+ G+ EA V EM + +
Sbjct: 610 KSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 668
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI + +Q A L +M+ + P++ +++ ++ +C
Sbjct: 669 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 34/462 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y M+ ++ I + ++ ++M+ C + I Y +A +++ A LF+ +
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 538
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV---------------KSRI 151
C+ +++ L+ K ++E A +F R C +V + +
Sbjct: 539 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 598
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D C+ R + A + M +GC P++ Y L+ GLC +L+EA +
Sbjct: 599 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--RRHRID-L 268
M S+ G + Y +L+ + A ++L K+L AP ID L
Sbjct: 659 M----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEMIDGL 713
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C ++ ++ E +G P++ +Y+AM G+I ++L+ M +KG
Sbjct: 714 CKVGKTDEAYKLMQMMEE---KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 770
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAV 387
P+ V Y + K+G +D A ++EE +K T PT Y +++G +
Sbjct: 771 PNYVTYRVLIDHCCKNGALDVAHNLLEE--MKQTHWPTHTAGYRKVIEGF---NKEFIES 825
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS--YWPCVETYNVLI 445
+ L Q Y +L+D L + R A R+LEE+ S TYN LI
Sbjct: 826 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 885
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
LC K A EM + +P++ + SL+ + N+
Sbjct: 886 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ +S+R+ E ++++D M + CE V+ I + G+L+EA
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-- 652
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+E K E + F + Y + + L+D
Sbjct: 653 -------------------------QEVKTEMSEHGFPATLYTY---------SSLIDRY 678
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +R DLA V +M C P+ Y ++ GLC + +EA Y + + +KG
Sbjct: 679 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA----YKLMQMMEEKGC 734
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y ++ GKI+ +++LE++ KG+ AP +R+ + C ++ A
Sbjct: 735 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAH 793
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L+ E + + P+ + I+ +N+ +E +LDE+ P L +Y + L
Sbjct: 794 NLLEE-MKQTHWPTHTAGYRKVIEGFNK-EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 851
Query: 342 FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K ++ AL ++EE T V YN L++ LC A A +M+K+ G +
Sbjct: 852 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK-GVI 910
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLE 427
+++ L+ GL R+ + EA +L+
Sbjct: 911 PEMQSFCSLIKGLFRNSKISEALLLLD 937
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 294 PSLASYSAM-----AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
PS ++Y+ + D + ++ + L +R GF Y +L K G
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-----SLCKVGKWR 246
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EAL ++E E FVP Y L+ GLC+A A+ +L +M + C+ N TY
Sbjct: 247 EALTLVETE----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRM-RATSCLPNVVTYST 301
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G + RVL M++ +P + +N L+ C+ G A L++M+
Sbjct: 302 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 361
Query: 469 KLPDISVWSSLVASVCCNTADLN 491
+P V++ L+ S+C + LN
Sbjct: 362 HMPGYVVYNILIGSICGDKDSLN 384
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 179/426 (42%), Gaps = 54/426 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S+I L E N + ++ QM + ++ I + +L+ A S F+ +
Sbjct: 17 FGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMV 76
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL-----MDVLC 162
Q C+ ++ L+ + K K E H +F E+ S+ S L+ ++ C
Sbjct: 77 QSGCLPDKVTYTVLVHSLFKACKWEQGHQIF------EEMLSKGHSPELVTYATVVNGYC 130
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R D AL + + + G P Y L+ GLC R EA L + M G
Sbjct: 131 KAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAREL-FEM-----AAGDV 184
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+D+++Y + + LC GK+ +A + K++ G
Sbjct: 185 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCA------------------------- 219
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
P SY+ + L + R+ E +++D+ + P + + + L
Sbjct: 220 -----------PDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 268
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K V+EA ++E + G P+V Y+ ++ GLC A A + L+KM ++ GCV +
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKM-RRAGCVPD 327
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY ++D C+ GR EA + + M R V YN+LIRG C K EA+ +E
Sbjct: 328 VVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIE 387
Query: 463 EMISQA 468
EM +
Sbjct: 388 EMAGRG 393
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 14/327 (4%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + DLA F++M GC PD+ +Y +L+ L + + + +F + KG
Sbjct: 59 LCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQG----HQIFEEMLSKG 114
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V Y T++ C G+I A+ ++ ++ G ++P + ID LC + E+
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG-RSPSGSLYSTLIDGLCKHDRHEE- 172
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A+ L A G + + Y++ L G++ E V +M G P V Y
Sbjct: 173 --ARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 228
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ +L KD V EA E++++ M + +P V V +L+ GLC + A + L++M +
Sbjct: 229 IYSLCKDNRVSEAKELMDQAMERKC-MPGVPVCTVLVDGLCKSRRVEEACVILERMLEAG 287
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY ++DGLC+ R +A VL++M P V TY +I C +G+ EA
Sbjct: 288 DRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 347
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ M + D+ ++ L+ C
Sbjct: 348 RELFQRMHERGCASDVVAYNILIRGYC 374
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 142/339 (41%), Gaps = 45/339 (13%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I + L+ LC+ ++ AL +F +M PD Y +++ LC +L+ A
Sbjct: 10 ITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAA 69
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S F ++ Q G D V Y L+ +L K + QI E++L KG
Sbjct: 70 ----SYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS--------- 116
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
P L +Y+ + GRI + ++ ++ G
Sbjct: 117 ---------------------------PELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 149
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PS +Y + L K +EA E+ E M G V V VY + GLC AG A
Sbjct: 150 RSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGD-VQDVIVYTSFISGLCKAGKLDEA 206
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
KM + GC + +Y +++ LC+D R EA ++++ + R P V VL+
Sbjct: 207 KAVHVKMI-EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD 265
Query: 447 GLCSIGKQYEAVMWLEEMISQA-KLPDISVWSSLVASVC 484
GLC + EA + LE M+ + P + +S+++ +C
Sbjct: 266 GLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLC 304
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY S I L ++ ++ E K V +M C + I + + +++EA L
Sbjct: 189 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 248
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C+ L+ + K ++E A ++ R + + + + ++D LC+ R
Sbjct: 249 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADR 308
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A V Q+M GC PD +Y ++ C RL+EA L F R+ ++G D+V
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL----FQRMHERGCASDVV 364
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGL 256
Y L+ C K+ +A+ ++E++ +G+
Sbjct: 365 AYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 28/417 (6%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
++ R AG+ +A S+ + + + T +++ +L + SK+E A +LF
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V + + + +++D C+ + A F EM GC P+ +Y L+ ++++
Sbjct: 512 GGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L +M +G +IV Y L+ C G+++ A QI E+
Sbjct: 571 YANELFETML----SEGCLPNIVTYSALIDGHCKAGQVEKACQIFER------------- 613
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+C D D++ ++ R P++ +Y A+ R+ E K+LD M
Sbjct: 614 ----MCGSKDVPDVDMYFKQYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ ++Y+A + L K G +DEA EV + EM + F T+ Y+ L+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+A L KM + C N Y ++DGLC+ G+ EA ++++ M + P V TY
Sbjct: 726 DLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G IGK + LE M S+ P+ + L+ CC L+V LE++
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH-CCKNGALDVAHNLLEEM 840
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 227/590 (38%), Gaps = 121/590 (20%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ + + ++++ P + F A + Y+H PVY +++ ++ + +E +
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQI-GYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
Q++ D E +R + R G + A+ L F ++N L++ +K
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 129 SKLEAAHIL-------------FLRSCYGW---------EVKSRIQSLNLLMDV------ 160
+L++A ++ F C+ + E + +++ N + D
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKL 308
Query: 161 ---LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
LC+ + A+ M C P+ +Y L+ G N ++L +L
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALC-DQGKIQ-DA 244
Y + ++ + G V+Y L+ ++C D+ + D
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 245 MQILEK----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ + EK +L G+ K C C+ G+ E A S+I E + +G IP ++YS
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYS 487
Query: 301 -------------------------AMAIDLYN----------EGRIVEGDKVLDEMRTK 325
+ D+Y G I + K +EMR
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + A K V A E+ E + +G +P + Y+ L+ G C AG
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEK 606
Query: 386 AVMYLKKM--SKQVGCV-------------ANGETYGILVDGLCRDGRFLEASRVLEEML 430
A ++M SK V V N TYG L+DG C+ R EA ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P Y+ LI GLC +GK EA EM + +SSL+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 193/466 (41%), Gaps = 28/466 (6%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+ + Y +I L E++ E + +++M+ SC ++T + QL
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + C + FN+L+ A+ L + + + N+L+
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV-VYNILIG 415
Query: 160 VLC------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+C C DLA + EM G ++ + + LC+ + +A +S+
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA----FSVI 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ +G D Y +L LC+ K++ A + E++ R GL A + C
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G IE A+ NE G P++ +Y+A+ ++ +++ + M ++G P++V
Sbjct: 532 GL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 334 YEAKLAALFKDGMVDEALEVIE---------------EEMVKGTFVPTVRVYNILLKGLC 378
Y A + K G V++A ++ E ++ + P V Y LL G C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A L MS + GC N Y L+DGLC+ G+ EA V EM + +
Sbjct: 651 KSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI + +Q A L +M+ + P++ +++ ++ +C
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 34/462 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y M+ ++ I + ++ ++M+ C + I Y +A +++ A LF+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV---------------KSRI 151
C+ +++ L+ K ++E A +F R C +V + +
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D C+ R + A + M +GC P++ Y L+ GLC +L+EA +
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--RRHRID-L 268
M S+ G + Y +L+ + A ++L K+L AP ID L
Sbjct: 700 M----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEMIDGL 754
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C ++ ++ E +G P++ +Y+AM G+I ++L+ M +KG
Sbjct: 755 CKVGKTDEAYKLMQMMEE---KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAV 387
P+ V Y + K+G +D A ++EE +K T PT Y +++G +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEE--MKQTHWPTHTAGYRKVIEGF---NKEFIES 866
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS--YWPCVETYNVLI 445
+ L Q Y +L+D L + R A R+LEE+ S TYN LI
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
LC K A EM + +P++ + SL+ + N+
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ +S+R+ E ++++D M + CE V+ I + G+L+EA
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-- 693
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+E K E + F + Y + + L+D
Sbjct: 694 -------------------------QEVKTEMSEHGFPATLYTY---------SSLIDRY 719
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +R DLA V +M C P+ Y ++ GLC + +EA Y + + +KG
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA----YKLMQMMEEKGC 775
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y ++ GKI+ +++LE++ KG+ AP +R+ + C ++ A
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAH 834
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L+ E + + P+ + I+ +N+ +E +LDE+ P L +Y + L
Sbjct: 835 NLLEE-MKQTHWPTHTAGYRKVIEGFNK-EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 342 FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K ++ AL ++EE T V YN L++ LC A A +M+K+ G +
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK-GVI 951
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLE 427
+++ L+ GL R+ + EA +L+
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 294 PSLASYSAM-----AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
PS ++Y+ + D + ++ + L +R GF Y +L K G
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-----SLCKVGKWR 287
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EAL ++E E FVP Y L+ GLC+A A+ +L +M + C+ N TY
Sbjct: 288 EALTLVETE----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRM-RATSCLPNVVTYST 342
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G + RVL M++ +P + +N L+ C+ G A L++M+
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 469 KLPDISVWSSLVASVCCNTADLN 491
+P V++ L+ S+C + LN
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLN 425
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PNY Y +I ++ + ++++MK + + I + + + E
Sbjct: 812 PNY----VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIE 865
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLL 157
++ L + Q + + + L+ ++K +LE A +L + + + + N L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ LC + + A +F EM +G P+ +S+ L+KGL + +++EA LL
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 49/447 (10%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-- 138
+ F T + R G + EA LF + +NTL+ K ++ A +L+
Sbjct: 318 ATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEE 377
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+R+ V + N+L+ + R + + + +++ G + D Y +++ LC
Sbjct: 378 MRTT---GVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCW 434
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
RL+EA LL + +KG +V + +L+ A G A + ++R G
Sbjct: 435 AGRLDEAMKLLQELL----EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTP 490
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
S + + + C G ++ A+ L+ L +G + +Y+ + +D Y + +EG +
Sbjct: 491 SSSTCNSLLMGLCRKGW-LQEARILLYRMLEKGFPINKVAYTVL-LDGYFKMNNLEGAQF 548
Query: 319 L-DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L EM+ +G +P V + A + L K G V+EA EV E G FVP YN L++GL
Sbjct: 549 LWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG-FVPNNFAYNSLIRGL 607
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR-------FLEASRV----- 425
CD G A+ K+M +Q G +++ T+ I++DG CR G+ FL+ R+
Sbjct: 608 CDCGRVTEALKLEKEM-RQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666
Query: 426 --LEEMLIRSYW---------------------PCVETYNVLIRGLCSIGKQYEAVMWLE 462
+LI Y P + TYN + G C + K +AV+ L+
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILD 726
Query: 463 EMISQAKLPDISVWSSLVASVCCNTAD 489
++IS +PD ++++++ +C + D
Sbjct: 727 QLISAGIVPDTVTYNTMLSGICSDILD 753
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 174/373 (46%), Gaps = 13/373 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y M+ L + R+ E +++ ++ F + I Y+RAG ++A ++ +
Sbjct: 424 LYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM 483
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCR 165
+ + + N+LL + ++ L+ A IL R G+ + + +L+D +
Sbjct: 484 VRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINK--VAYTVLLDGYFKMN 541
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A +++EM +G YPD ++ L+ GL + EA Y +F +S G +
Sbjct: 542 NLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEA----YEVFLEMSAIGFVPNN 597
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y +L+ LCD G++ +A+++ +++ +KGL + + I C G+ ++ ++
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
I G +P + +++ + +V +++++M + G P + Y + +
Sbjct: 658 MQRI-GLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMR 716
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-DAGNSAVAVMYLKKMSKQVGCVANGE 404
+++A+ +I ++++ VP YN +L G+C D + A M L ++G + N
Sbjct: 717 KMNQAV-IILDQLISAGIVPDTVTYNTMLSGICSDILDRA---MILTAKLLKMGFIPNVI 772
Query: 405 TYGILVDGLCRDG 417
T +L+ C+ G
Sbjct: 773 TTNMLLSHFCKQG 785
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 149/377 (39%), Gaps = 67/377 (17%)
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------------------- 212
+F++M F+G P +++ ++ G C R+ LL+ M
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293
Query: 213 -----------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ + G + + T+L ALC +G + +A ++ + I G+ AP +
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGI-APNA 352
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + ++ A L E G P +++ + Y GRI + D++L +
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT------------------- 362
+ G + +Y+ +++L G +DEA+++++E + KG
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472
Query: 363 ---------------FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
F P+ N LL GLC G A + L +M ++ G N Y
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEK-GFPINKVAYT 531
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L+DG + A + +EM R +P + LI GL G EA EM +
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591
Query: 468 AKLPDISVWSSLVASVC 484
+P+ ++SL+ +C
Sbjct: 592 GFVPNNFAYNSLIRGLC 608
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 8/274 (2%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P + T L + K + A ++F E + N Y S+I L + R+TE
Sbjct: 559 YPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI--GFVPNNFAYNSLIRGLCDCGRVTEA 616
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
++ +M+ F I + R GQ+ A+ F ++ + + +FN L+
Sbjct: 617 LKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGG 676
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K + A + + Y + I + N M C+ R+ + A+ + ++ G P
Sbjct: 677 YCKAFDMVGAGEI-VNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y+ ++ G+C+D L+ A L ++ + G +++ LL C QG + A
Sbjct: 736 DTVTYNTMLSGICSD-ILDRAMILTA----KLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
+ +K+ + +D C +D+E
Sbjct: 791 LIWGQKLREISFGFDEISYRILDQAYCLMQDDVE 824
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAAL-------FKDGMVDEALEVIEEEMVKGTFV-PTV 367
+K++D M W + MYE+ + L GM EALEV+ M++G V P +
Sbjct: 160 NKIVDFM-----WRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLR--MMRGVGVRPGL 212
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
ILL+ L G+ K M + G + T+ ++ G CR R + +L
Sbjct: 213 SSITILLRLLLRIGDYGSVWKLFKDMIFK-GPRPSNLTFNAMICGFCRQHRVVVGESLLH 271
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M P V T+N+LI C G+ + A+ WL M+ P ++ +++++ ++C
Sbjct: 272 LMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALC 328
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 201/481 (41%), Gaps = 48/481 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I +L + R E KE + +M + ++ + I Y + G++ A+ +F+ +
Sbjct: 337 YGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLME 396
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++++L+ ++++ KL A L + + + + L+ C+
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQCKKHEF 455
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-----------THLLYS----- 211
D A +F+ M+ G PD ++Y++L LC R EA T + Y+
Sbjct: 456 DNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 515
Query: 212 ------------MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ ++ +G D Y LL ALC Q K+ +A+ IL+++ G+K
Sbjct: 516 FSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCN 575
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
I +G+ + AKS+ NE + G PS +Y+ G+I E + ++
Sbjct: 576 IVAYTIIISEMIKEGKH-DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLI 634
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK---- 375
EM G P +V Y + G +D A ++ M+ + P Y ILLK
Sbjct: 635 GEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR-MIDASCEPNYWTYWILLKHFLK 693
Query: 376 -GLCDAGNSAVAVMY-----------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
L DA + M+ L++M K G TY ++ G C+ R EA
Sbjct: 694 MSLVDAHYVDTSGMWNWIELDTVWQLLERMVKH-GLNPTAVTYSSIIAGFCKATRLEEAC 752
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + M + P E Y +LI+ C I +AV ++ +MI P + + L+ +
Sbjct: 753 VLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGL 812
Query: 484 C 484
C
Sbjct: 813 C 813
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 186/441 (42%), Gaps = 12/441 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L + RI + V+++M + I Y ++G++ +A+ +
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 253
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + C ++N L+ + E EA +L G+ + + +++ C+
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGF--TPTVITFTNIINGYCK 311
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D AL V M C D ++Y +L+ L R EA + MF G
Sbjct: 312 AERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMF----ANGLAP 367
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++VIY +++ C GK+ A+++ + +G + P + + + + + A +L
Sbjct: 368 NVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCR-PNAWTYSSLIYGLIQDQKLHKAMAL 426
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I + G P + +Y+ + + ++ + M G P Y AL K
Sbjct: 427 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCK 486
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +EA +V+ V T Y L+ G AGN+ A + ++KM + GC A+
Sbjct: 487 SGRAEEAYSF----LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADS 541
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY +L+ LC+ + EA +L++M + + Y ++I + GK A E
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601
Query: 464 MISQAKLPDISVWSSLVASVC 484
MIS P + ++ ++S C
Sbjct: 602 MISSGHKPSATTYTVFISSYC 622
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 204/485 (42%), Gaps = 58/485 (11%)
Query: 9 LTPTYLSQIIKKQKSPL---TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
+T +++ + + +PL TAL F E + P +RH +A+++ +L+
Sbjct: 50 VTAAHVADLFRAPVAPLDPATALAFF-EWVARRPGFRHTAASHAALLQLLARRRAPANYD 108
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ M C D+ A + EAV + + +
Sbjct: 109 KLVVSM----VSCSDT-----------AEDMREAVDAIQAIRR----------------- 136
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--CRRSDLALHVFQEMDFQGCY 183
V +A +L + G + S +L+ LC+ C R L L V D GC
Sbjct: 137 VGGDLRKACWLLMMMPLMG--CRRNEYSYTILIQGLCETRCVREALVLLVMMVQD--GCS 192
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
+ +Y +L+KGLC + R++ A +L M R G + Y ++ C G+++D
Sbjct: 193 LNLHTYTLLIKGLCKEGRIHGARRVLEEMPLR----GVVPSVWTYNAMIDGYCKSGRMKD 248
Query: 244 AMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+ I + R G P + I LC GE + A+ L+N+A++RG P++ +++
Sbjct: 249 ALGIKALMERNGCN-PDDWTYNILIYGLC----GEKPDEAEELLNDAIVRGFTPTVITFT 303
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ RI + +V M + L Y + L K EA E + E
Sbjct: 304 NIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFAN 363
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P V +Y ++ G C G A+ + M + GC N TY L+ GL +D +
Sbjct: 364 G-LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE-GCRPNAWTYSSLIYGLIQDQKLH 421
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSL 479
+A ++ +M P V TY LI+G C +++ L EM+ Q L PD ++ L
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCK-KHEFDNAFRLFEMMEQNGLTPDEQAYNVL 480
Query: 480 VASVC 484
++C
Sbjct: 481 THALC 485
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 157/379 (41%), Gaps = 23/379 (6%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ + + +++AG + A L + + C + +++ LL+ + K+ KL EA IL
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ G VK I + +++ + + + D A +F EM G P +Y + + C
Sbjct: 568 TLSG--VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIG 625
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK---------- 250
++ EA HL+ M + G D+V Y + G + A L++
Sbjct: 626 QIEEAEHLIGEM----ERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNY 681
Query: 251 -----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L+ LK H +D + +++ L+ + G P+ +YS++
Sbjct: 682 WTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAG 741
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
R+ E + D MR K P+ +Y + + +A+ + + M++ F P
Sbjct: 742 FCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD-MIEFGFQP 800
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+ Y+ L+ GLCD G+ A + N + IL DGL + G S++
Sbjct: 801 HLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQL 860
Query: 426 LEEMLIRSYWPCVETYNVL 444
L M R ETY+++
Sbjct: 861 LSAMENRHCQIDSETYSMV 879
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y IL++GLC+ A++ L M Q GC N TY +L+ GLC++GR A RVLEEM
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMV-QDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+R P V TYN +I G C G+ +A+ M PD ++ L+ +C D
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPD 281
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 191/435 (43%), Gaps = 25/435 (5%)
Query: 21 QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD 80
K PL + F + +H G V LS S RI ++ D
Sbjct: 77 HKHPLPCIVEFDKLLSALVRIKHYGTV-------LSLSKRIELLRIERDVFH-------- 121
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
F I ++R +++ A S+ + + +F++L+ + E K A + F
Sbjct: 122 --FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARA-MEFFD 178
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + + N ++ C+ ++ +A+ + ++MD G PD Y+ ++ GLC DR
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++EA +F I KG D+ Y L+ LC+ + ++A + +++ +
Sbjct: 239 LVSEA----LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C +G + A+ +I + +G P+ A+Y+++ + ++ E V D
Sbjct: 295 VTFNILVDKLCKEGM-LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M TKG P++V Y + K +DEA E+ +E +G +P YN L+ GLC A
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG-LIPNTFNYNTLISGLCQA 412
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A K M Q GC + T IL+D LC+ G A R+ M P + T
Sbjct: 413 GRHCEARELFKDMQAQ-GCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVT 471
Query: 441 YNVLIRGLCSIGKQY 455
Y++LIR + GK Y
Sbjct: 472 YDILIRAMYKSGKIY 486
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 154/338 (45%), Gaps = 7/338 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + N+L++ + +R D A V ++ G PD ++ L+ GLC + + A
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
F + G ++ Y T++ C GK A+ +L+K+ + G + + I
Sbjct: 175 EF----FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D + A + +E +G P + +YS + L N + E + +EM +
Sbjct: 231 IDGLCKD-RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN 289
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V + + L K+GM+ EA +I+ + KG P YN L+ G C A
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV-EPNYATYNSLMNGYCLQNKVFEA 348
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M M + GC+ N +Y IL++G C+ R EA + +EM R P YN LI
Sbjct: 349 RMVFDAMITK-GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ EA ++M +Q PD+ + L+ S+C
Sbjct: 408 GLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 7/327 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ LC + A+ F EM G P+ +Y+ ++KG C + A LL M
Sbjct: 160 LINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM---- 215
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ G DIVIY T++ LC + +A+ I +I KG++ P + I + + +
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVR-PDVFTYSILMHGLCNSDQ 274
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
E A +L NE + +P + +++ + L EG + E ++ M KG P+ Y +
Sbjct: 275 KEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ V EA V + + KG +P V YNIL+ G C A A +MS +
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGC-MPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + N Y L+ GLC+ GR EA + ++M + P + T +L+ LC +G
Sbjct: 394 -GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDN 452
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASV 483
A+ M P++ + L+ ++
Sbjct: 453 ALRLFRAMQDSCLKPNLVTYDILIRAM 479
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L Y + R+ G ++ YRT++ ALC G + A + KIL+ G +
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLL 237
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
L C G ++ A + + + R G P+ SYS + L GR+ E + D+M K
Sbjct: 238 LGFCR-GLNLRDALKVF-DLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G PS Y + AL G++D+A + +E + +G P V Y +L+ GLC G
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGC-KPNVHTYTVLIDGLCRDGKIEE 354
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +KM K G + TY L++G C+DGR + A +L M R+ P V T+N L+
Sbjct: 355 ANGVCRKMVKD-GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
GLC +GK Y+AV L+ M+ PDI ++ L+ + C +NV K L ++S
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL-CREGHMNVAYKLLTSMNS 469
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 166/371 (44%), Gaps = 50/371 (13%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVF 174
+ T++ + K EAA + + G+ + S I + +LL+ CR +L AL VF
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVT-SLLLGF---CRGLNLRDALKVF 253
Query: 175 QEMDFQG-CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
M +G C P+ SY IL+ GLC RL EA + + ++ +KG Y L+
Sbjct: 254 DLMSREGTCAPNSVSYSILIHGLCEVGRLEEA----FGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
ALCD+G I A +L +E + RG
Sbjct: 310 ALCDRGLIDKAF------------------------------------NLFDEMIARGCK 333
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + L +G+I E + V +M G +PS++ Y A + KDG V A E+
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ M K P VR +N L++GLC G AV LK+M G + +Y +L+DGL
Sbjct: 394 LTV-MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDGL 451
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
CR+G A ++L M P T+ +I C GK A +L M+ + D
Sbjct: 452 CREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 474 SVWSSLVASVC 484
++L+ VC
Sbjct: 512 VTGTTLIDGVC 522
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 174/400 (43%), Gaps = 38/400 (9%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH----------------ILFLRSCY-------GWEV 147
C + TQ N LLK +V AH +L L SC+ G+ +
Sbjct: 100 CFDPTQK-NQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRL 158
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
S +LLM L + LA ++ M+ G Y ++ LC N T
Sbjct: 159 NYPCYS-SLLMS-LAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK----NGYTE 212
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI- 266
+I + G D I +LL C ++DA+++ + + R+G AP S + I
Sbjct: 213 AAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSIL 272
Query: 267 --DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
LC E+ G K + E +G PS +Y+ + L + G I + + DEM
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGE---KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIA 329
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P++ Y + L +DG ++EA V + MVK P+V YN L+ G C G
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK-MVKDGIFPSVITYNALINGYCKDGRVV 388
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L M K+ C N T+ L++GLCR G+ +A +L+ ML P + +YNVL
Sbjct: 389 PAFELLTVMEKR-ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I GLC G A L M S PD +++++ + C
Sbjct: 448 IDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFC 487
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 179/406 (44%), Gaps = 18/406 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L + I + + D+M C+ + I R G++ EA + + +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++N L+ K+ ++ A L R+C K +++ N LM+ LC+
Sbjct: 364 KDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC-----KPNVRTFNELMEGLCR 418
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A+H+ + M G PD SY++L+ GLC + +N A LL SM +
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM----NSFDLEP 474
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D + + ++ A C QGK A L +LRKG+ + + CN G+ +
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL--F 532
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEG-RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
I E L++ + + + +D+ ++G ++ E +L ++ G PS+V Y + L
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G + + ++E + G +P V Y I++ GLC G A L M + G N
Sbjct: 593 RSGDISGSFRMLELMKLSGC-LPNVYPYTIIINGLCQFGRVEEAEKLLSAM-QDSGVSPN 650
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
TY ++V G +G+ A + M+ R Y Y+ L+RG
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 199/455 (43%), Gaps = 11/455 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
ALK+F + + N Y+ +I L E R+ E + DQM C+ +
Sbjct: 249 ALKVF-DLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ G +++A +LF + C ++ L+ + ++ K+E A+ + R
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV-CRKMVKDG 366
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + N L++ C+ R A + M+ + C P+ +++ LM+GLC + +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
HLL M G DIV Y L+ LC +G + A ++L + L+ I
Sbjct: 427 HLLKRML----DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTK 325
C G+ S ++R GI ID + N G+ + +L+ +
Sbjct: 483 INAFCKQGK--ADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM 540
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
+ L L K + E L ++ + + K VP+V Y L+ GL +G+ +
Sbjct: 541 RMLTTPHSLNVILDMLSKGCKLKEELAMLGK-INKLGLVPSVVTYTTLVDGLIRSGDISG 599
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L+ M K GC+ N Y I+++GLC+ GR EA ++L M P TY V++
Sbjct: 600 SFRMLELM-KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G + GK A+ + M+ + + ++SSL+
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 179/405 (44%), Gaps = 11/405 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLS-QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ + + + R L +A+ +F +S + C + S++ L+ + + +LE A L+
Sbjct: 232 IVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEA--FGLK 289
Query: 141 SCYGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
G + + ++ +L+ LC D A ++F EM +GC P+ +Y +L+ GLC D
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRD 349
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
++ EA + M + G ++ Y L+ C G++ A ++L + ++ K
Sbjct: 350 GKIEEANGVCRKMV----KDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G+ + A L+ L G P + SY+ + L EG + K+L
Sbjct: 406 VRTFNELMEGLCRVGKPYK-AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLL 464
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
M + P + + A + A K G D A + + KG + V L+ G+C+
Sbjct: 465 TSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV-TGTTLIDGVCN 523
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G + A+ L+ + K + + + +++D L + + E +L ++ P V
Sbjct: 524 VGKTRDALFILETLVK-MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVV 582
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY L+ GL G + LE M LP++ ++ ++ +C
Sbjct: 583 TYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLC 627
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 116/334 (34%), Gaps = 73/334 (21%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T I G+ +A+ + + L + + S N +L + K KL+ + L
Sbjct: 515 TTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKE-ELAMLGKIN 573
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + + L+D L + + + + M GC P+ Y I++ GLC R+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ---------------IL 248
EA LL +M G + V Y ++ + GK+ A++ I
Sbjct: 634 EAEKLLSAM----QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+LR + + K R D E K LI+ GG S S + I L
Sbjct: 690 SSLLRGFVLSQKGIRE----------TDPECIKELISVVEQLGG-----STSGLCIFLVT 734
Query: 309 ----EGRIVEGDKVLDEM-----------------------RTK-----------GFWPS 330
EGR E + ++ + TK GF PS
Sbjct: 735 RLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPS 794
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ + L K+G + A E++ E + V
Sbjct: 795 FKSFCLVIQGLKKEGDTERARELVMELLTSNGVV 828
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M F+G PD SY ++ G C L + L+ M KG ++ Y +++ LC
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEM----QMKGLKPNLYTYNSIILLLC 56
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK+ DA ++L +++ +G+ + C G +I+ A L +E + +P
Sbjct: 57 KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLG-NIQAAYKLFDEMEKQRIVPDF 115
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+A+ L G+++E DKV ++M ++G P V Y + K G +++A +
Sbjct: 116 IAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS-LHN 174
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+MV+ P V Y L GLC G A L +M + G N TY LV+GLC+
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK-GLQLNICTYNSLVNGLCKS 233
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G +A +++EEM + +P T+ L+ C G+ +A L EM+ + P + +
Sbjct: 234 GNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITF 293
Query: 477 SSLVASVC 484
+ L+ C
Sbjct: 294 NVLMNGFC 301
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
L + QEM +G P+ +Y+ ++ LC ++++A +L M +G D V+Y T
Sbjct: 30 LKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI----NQGIVPDTVVYTT 85
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALI 289
L+ C G IQ A ++ +++ ++ + P + +C C G+ +E A + N+
Sbjct: 86 LIDGFCKLGNIQAAYKLFDEMEKQRI-VPDFIAYTAVICGLCRCGKMME-ADKVFNKMFS 143
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P +Y+ + G + + + ++M G P++V Y A L K G VD
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E++ E KG + + YN L+ GLC +GN AV +++M + G + T+ L
Sbjct: 204 ANELLHEMCGKGLQL-NICTYNSLVNGLCKSGNIRQAVKLMEEM-EVAGMYPDTITFTTL 261
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+D C+ G ++A +L EML R P V T+NVL+ G C G + L M+ +
Sbjct: 262 MDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGI 321
Query: 470 LPDISVWSSLVASVC 484
+P+ + ++SL+ C
Sbjct: 322 MPNTTTYNSLMKQYC 336
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 195/443 (44%), Gaps = 11/443 (2%)
Query: 41 YRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+R + P Y+++I + ++ ++I +M+ + + + I ++G+++
Sbjct: 3 FRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVD 62
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+A + + + V T + TL+ K ++AA+ LF + + +
Sbjct: 63 DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF-DEMEKQRIVPDFIAYTAV 121
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ LC+C + A VF +M +G PD +Y L+ G C + +A +S+ ++
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKA----FSLHNQMV 177
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
Q G ++V Y L LC G++ A ++L ++ KGL+ + + C G +I
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG-NI 236
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A L+ E + G P +++ + G +V+ ++L EM +G P+++ +
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ GM+++ ++ + KG +P YN L+K C N K M +
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKG-IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR- 354
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + + TY IL+ G C+ EA + +EM + + +YN +I+G K EA
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
EEM + D +++ V
Sbjct: 415 RELFEEMRREGMAADAEIYNLFV 437
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 184/418 (44%), Gaps = 10/418 (2%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
LK+ +E + K + N Y S+I +L +S ++ + + V+ +M V+ T I
Sbjct: 30 LKLIQEMQMK--GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLI 87
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ + G + A LF + + V ++ ++ + + K+ A +F + V
Sbjct: 88 DGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF-NKMFSRGV 146
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + L+D C+ + A + +M G P+ +Y L GLC +++ A
Sbjct: 147 EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANE 206
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
LL+ M KG +I Y +L+ LC G I+ A++++E++ G+ +
Sbjct: 207 LLHEM----CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C GE ++ A L+ E L RG P++ +++ + G + +G+++L M KG
Sbjct: 263 DAYCKTGEMVK-AHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGI 321
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ Y + + + E+ + +G +P YNIL+KG C A N A
Sbjct: 322 MPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV-MPDSNTYNILIKGHCKARNMKEAW 380
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
K+M+++ G +Y ++ G + + EA + EEM E YN+ +
Sbjct: 381 FLHKEMAEK-GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 154/366 (42%), Gaps = 45/366 (12%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A K+F E +++ P++ Y ++I L ++ E +V ++M E + +
Sbjct: 99 AYKLFDEMEKQRIVPDF----IAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYT 154
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T I Y ++G++ +A SL + Q ++ L + K +++ A+ L C G
Sbjct: 155 TLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC-G 213
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ I + N L++ LC+ A+ + +EM+ G YPD ++ LM C + +
Sbjct: 214 KGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK 273
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------ 258
A LL M R G ++ + L+ C G ++D ++L +L KG+
Sbjct: 274 AHELLREMLDR----GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329
Query: 259 ----------------------------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
P S + I + +++ A L E +
Sbjct: 330 SLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G + +SY+++ + + +I E ++ +EMR +G +Y + + +G ++ A
Sbjct: 390 GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETA 449
Query: 351 LEVIEE 356
LE+ +E
Sbjct: 450 LELCDE 455
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 198/440 (45%), Gaps = 25/440 (5%)
Query: 54 ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ--FNC 111
+L ++ R +M+ V M E + T + ++ +AG++++AV+L K++ C
Sbjct: 203 VLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGC 262
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+ ++N ++ + ++ +LE A L K+ + N L+ L + A
Sbjct: 263 LPNDVTYNVVINGLARKGELEKAAQLV--DIMRLSKKASAFTYNPLITGLLARDFVEKAG 320
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ EM+ +G P +Y+ L+ GL A F + KG D++ Y +L
Sbjct: 321 ALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ----VKFDEMRAKGLLPDLITYNSL 376
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEA 287
+ C G ++ A+ + + R GL P + I + DG D+EGA+ L E
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGL-GPTVLTYNILI----DGYCRLGDLEGARRLKEEM 431
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+P + +Y+ + + DEM +KG P Y +++A G +
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAI 491
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSK--QVGCVANGE 404
A ++ EE M++G TV YN+L+ GLC G+ A V+++K ++ ++ CV
Sbjct: 492 TNAFQLREEMMLRGISSDTV-TYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV---- 546
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+ C GR +EA + + M+ P V TY + I C G Y A W +M
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKM 606
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + P+ ++ L+ ++C
Sbjct: 607 LEEGVEPNEVTYNVLMHALC 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 15/352 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
++N+L+ K L+ A LF R+ G + + N+L+D C+ + A +
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLG----PTVLTYNILIDGYCRLGDLEGARRL 427
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+EM + C PD +Y ILM G C R L ++ F + KG D Y T +
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLA----MVRIFFDEMLSKGLEPDCFAYNTRIS 483
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
A G I +A Q+ E+++ +G+ + + + C G ++ A L + + G
Sbjct: 484 AELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS-LKDAYVLWMKMVTDGLR 542
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
+Y+ + GR++E + D M G PS+V Y + + G + A
Sbjct: 543 LDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGW 602
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ + +G P YN+L+ LC G + A + +M ++ G V N TY +L+DG
Sbjct: 603 FRKMLEEGV-EPNEVTYNVLMHALCRMGRTESAYQHFHEMLER-GLVPNKYTYTLLIDGS 660
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
C++G ++ A R+ EM + P T+N L +G G Y+AV +LE ++
Sbjct: 661 CKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENVV 711
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 150/328 (45%), Gaps = 14/328 (4%)
Query: 162 CQCRRSDLA------LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
CQ ++S A L FQEM G P + + +++ L + R ++ + +++
Sbjct: 164 CQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDD----MRAVYSD 219
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI-LRKGLKAPKSRRHRIDLCPCNDG 274
+ Q G I Y TLL + C G++ A+ +L+ + R P + + +
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
++E A L++ + + +Y+ + L + + +L EM +G P++V Y
Sbjct: 280 GELEKAAQLVDIMRLSKKASAF-TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ LFK G EA +V +EM +P + YN L+ G C AGN A+ +
Sbjct: 339 NTLIDGLFKTGNA-EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDL- 396
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K+ G TY IL+DG CR G A R+ EEM P V TY +L+ G C +
Sbjct: 397 KRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNL 456
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ +EM+S+ PD +++ +++
Sbjct: 457 AMVRIFFDEMLSKGLEPDCFAYNTRISA 484
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 187/469 (39%), Gaps = 44/469 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCEC--KDSVFATAIRTYARAGQLNEAVSLFK 104
Y +++ ++ R+ + ++ M+ + C D + I AR G+L +A L
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV- 289
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
++ + + ++N L+ ++ +E A L L + + + N L+D L +
Sbjct: 290 DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM-ENEGIVPTVVTYNTLIDGLFKT 348
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
++ A F EM +G PD +Y+ L+ G C L +A +F + + G G
Sbjct: 349 GNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA----LCLFGDLKRAGLGPT 404
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
++ Y L+ C G ++ A ++ E++ + P + I + ++ +
Sbjct: 405 VLTYNILIDGYCRLGDLEGARRLKEEMTEEDC-LPDVCTYTILMNGSCMVRNLAMVRIFF 463
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E L +G P +Y+ G I ++ +EM +G V Y + L K
Sbjct: 464 DEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKT 523
Query: 345 G-----------MVDEALEV-----------------------IEEEMVKGTFVPTVRVY 370
G MV + L + I + MV P+V Y
Sbjct: 524 GSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTY 583
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
I + C GN +A + +KM ++ G N TY +L+ LCR GR A + EML
Sbjct: 584 TIFIHTYCRRGNLYLAYGWFRKMLEE-GVEPNEVTYNVLMHALCRMGRTESAYQHFHEML 642
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
R P TY +LI G C G A+ EM + PD ++L
Sbjct: 643 ERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNAL 691
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 43/409 (10%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C +F ++ Y R G + E + F+ + + CV S N LL ++K ++++
Sbjct: 175 CNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCW 234
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
++ + + + N+L V CQ D + M+ +G PD +Y+ L+
Sbjct: 235 QVY-KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISC 293
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C RL++A +L Y + +R + D+V Y L+ LC +GK+++A Q+ +++ +G
Sbjct: 294 YCRKGRLDDAFYL-YRIMYR---RNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRG 349
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
L P + S++ + EG++ E
Sbjct: 350 LN------------------------------------PDIVSFNTLICGYCKEGKMRES 373
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+L EM G P V + + K+ + AL ++ E G + T +Y+ L+
Sbjct: 374 RSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPIST-DIYDYLMV 432
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+C+ G A L+++S Q G V E Y L++ LC+ +A V EM R+
Sbjct: 433 SICEEGRPFAAKSLLQRIS-QRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIK 491
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY LI LC + EA +EEM+ LPD + +L+ C
Sbjct: 492 PSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYC 540
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 198/485 (40%), Gaps = 72/485 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKY---PNYRHNGPVYASMIGILSESNRIT 62
P L T +++ Q ++AL F K P+ ++ Y ++ IL+ S
Sbjct: 87 PHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQN----YCFLVHILAWS---- 138
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC--VNWTQS-FN 119
KE + MK F T + + NE V F+ L F C NW F+
Sbjct: 139 --KEFKEAMK----------FLTELIKLVKDCSFNEDV--FQTL-LFCCQDCNWDPVIFD 183
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+K V+E ++ F + V S I S N L++ L + R D V++EM
Sbjct: 184 MLVKAYVREGMIKEGFTTFRKIVEVGCVPSVI-SCNCLLNGLLKLNRIDQCWQVYKEMAR 242
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
G +P+ +++IL C D +++ L R+ ++G DIV Y TL+ C +G
Sbjct: 243 VGIHPNSYTFNILTHVFCQDGDVDKVNDFL----ERMEEEGFEPDIVTYNTLISCYCRKG 298
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ DA + + R R +P L SY
Sbjct: 299 RLDDAFYLYRIMYR------------------------------------RNVLPDLVSY 322
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+A+ L EG++ E ++ M +G P +V + + K+G + E+ ++ E M+
Sbjct: 323 TALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHE-MI 381
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
P +L++G A+ + ++ + G + + Y L+ +C +GR
Sbjct: 382 GSGICPDKVTCQVLIEGYRKEARIVSALNLVVELER-FGVPISTDIYDYLMVSICEEGRP 440
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
A +L+ + R Y P VE YN LI LC +A++ EM + P + +L
Sbjct: 441 FAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKAL 500
Query: 480 VASVC 484
+ +C
Sbjct: 501 ICCLC 505
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 36/366 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + + + + + ++ + +++M+ + E + T I Y R G+L++A L+
Sbjct: 248 NSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLY 307
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + N + S+ L+ + KE K+ AH LF R + + I S N L+ C+
Sbjct: 308 RIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRG-LNPDIVSFNTLICGYCK 366
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY------------- 210
+ + + EM G PD+ + +L++G + R+ A +L+
Sbjct: 367 EGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDI 426
Query: 211 ------------------SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
S+ RISQ+G + IY L+ +LC I DA+ + ++
Sbjct: 427 YDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMG 486
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ +K + C C +E A+SL+ E L G +P A+ + +Y + R
Sbjct: 487 HRNIKPSAITYKALICCLCRTSRSME-AESLMEEMLQSGMLPDPDICRAL-MHVYCKERD 544
Query: 313 VEGDKVLDEMRTKGFWP-SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + L + K F Y + +D +E +++ M+K F P ++ +
Sbjct: 545 IGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLME-LQDRMLKVGFAPNIQTFR 603
Query: 372 ILLKGL 377
++ GL
Sbjct: 604 QMIHGL 609
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 162/366 (44%), Gaps = 12/366 (3%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ L+ + K + AA I LR W ++ + ++++D LC+ D A ++ E
Sbjct: 165 SYGILINGVCKIGETRAA-IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTE 223
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +G PD +Y IL+ G C +LN A LL M + DI Y L+ ALC
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL----ENINPDIYTYTILVDALC 279
Query: 237 DQGKIQDAMQILEKILRK--GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+GK+++A +L +++ L C N+ + AK + G P
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNE---VNNAKRVFYTMTQMGVTP 336
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ YS M L R+ E + +E+ K P V Y + + L K G + ++
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+E + +G P V YN L+ LC G+ A+ KM Q N T+ IL+DGLC
Sbjct: 397 DEMLDRGQ-PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQ-AIRPNVYTFTILLDGLC 454
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ GR A +++L + Y V TY V+I GLC G EA+ M + D
Sbjct: 455 KVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAV 514
Query: 475 VWSSLV 480
+ ++
Sbjct: 515 TFEIMI 520
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 12/392 (3%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
++AVS F ++ + T FN +L +V + A L+ + EV+ +LN+
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLY-KQMELSEVEPDYFTLNI 98
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+++ C + LA ++ G P+ + + LMKGLC + ++ EA ++
Sbjct: 99 IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF----HDKV 154
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+G + Y L+ +C G+ + A+++L +I R ++ I C D
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL- 213
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
++ A L E + +G P + +YS + G++ +L+EM + P + Y
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--DAGNSAVAVMYLKKMS 394
+ AL K+G V EA E + MVK V VY+ L+ G C + N+A V Y
Sbjct: 274 LVDALCKEGKVKEA-ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFY---TM 329
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q+G + Y I+++GLC+ R EA + EE+ ++ P TY LI LC G+
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+EM+ + + PD+ +++L+ ++C N
Sbjct: 390 SYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 160/391 (40%), Gaps = 43/391 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y+ +I L + + E ++ +M G ++ + + GQLN A+
Sbjct: 195 RPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAID 254
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L L EMV E+ + I + +L+D L
Sbjct: 255 L-------------------LNEMVLEN-----------------INPDIYTYTILVDAL 278
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A +V M D Y LM G C +N A + Y+M +Q G
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM----TQMGV 334
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+ Y ++ LC ++ +A+ + E+I +K + + C C G I
Sbjct: 335 TPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR-ISYVW 393
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L +E L RG P + +Y+ + L G + + ++M+ + P++ + L L
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G + ALE ++ + KG + VR Y +++ GLC G A+ +M GC++
Sbjct: 454 CKVGRLKNALEFFQDLLTKG-YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDN-GCIS 511
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+ T+ I++ +A +++ EM+ R
Sbjct: 512 DAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P NI++ C G +A + K+ K +G N T L+ GLC +G+ EA R
Sbjct: 91 PDYFTLNIIINCFCHFGQVVLAFSGVSKILK-LGYQPNTITLNTLMKGLCLEGKVKEALR 149
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++L + + +Y +LI G+C IG+ A+ L + + P++ ++S ++ +C
Sbjct: 150 FHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC 209
Query: 485 CNT 487
+T
Sbjct: 210 KDT 212
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FAT 85
AL +F+E +K N + Y S+I L +S RI+ + ++ D+M D + D + +
Sbjct: 357 ALNLFEEIHQK--NMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML-DRGQPPDVITYNN 413
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I + G L+ A++LF + +F LL + K +L+ A + F +
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA-LEFFQDLLTK 472
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+++ ++++ LC+ D AL + M+ GC D ++ I+++ + ++A
Sbjct: 473 GYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKA 532
Query: 206 THLLYSMFWR 215
L+ M R
Sbjct: 533 EKLVREMIAR 542
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 200/429 (46%), Gaps = 45/429 (10%)
Query: 92 RAGQLNEAVSLFKNLSQFNCV-NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R+G+ ++A+ +F + V NW ++NT++ VK LEA L + + K
Sbjct: 28 RSGKGSDALKVFDEMVDMGVVPNWI-TYNTMIDGHVKGGDLEAGFRLRDQMLHDGP-KPN 85
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+ LC+ R D + EM +PD +Y IL GL R E+ +L
Sbjct: 86 IVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT---RTGESRTML- 141
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-------------- 256
S+F +KG LL LC GK+ A Q+LE ++ GL
Sbjct: 142 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 201
Query: 257 -------------KAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSL 296
+ KSR R D N +G E + A+ L+ E G PS+
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 261
Query: 297 ASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+++ + ID Y G++ + VL +M+ KG ++ + + + A K+G + EA+ +++
Sbjct: 262 ETFNTL-IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ M+ P +VYN ++ ++G++ A + ++KM K G A+ TY +L+ GLCR
Sbjct: 321 D-MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVTYNLLLKGLCR 378
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+ EA ++ + + P V +YN +I C+ G +A+ L+EM P +
Sbjct: 379 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438
Query: 476 WSSLVASVC 484
+ +LV+++
Sbjct: 439 YHTLVSALA 447
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
S+ D Y ++ L GK DA+++ ++++ G+
Sbjct: 8 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV-------------------- 47
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+P+ +Y+ M G + G ++ D+M G P++V Y
Sbjct: 48 ----------------VPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNV 91
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L+ L + G +DE V+ +EM + P Y+IL GL G S + + K+
Sbjct: 92 LLSGLCRAGRMDET-RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 150
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + T IL++GLC+DG+ +A +VLE ++ P YN LI G C +
Sbjct: 151 -GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 209
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A E+M S+ PD +++L+ +C
Sbjct: 210 AFCIFEQMKSRHIRPDHITYNALINGLC 237
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P SY+ + L+ G+ + KV DEM G P+ + Y + K G ++
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR- 72
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ ++M+ P + YN+LL GLC AG + + +M+ +G TY IL DGL
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH-SMFPDGFTYSILFDGL 131
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G + E L + T ++L+ GLC GK +A LE ++ +P
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
++++L+ C DL EQ+ S
Sbjct: 192 VIYNTLINGY-CQVRDLRGAFCIFEQMKS 219
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 170/424 (40%), Gaps = 72/424 (16%)
Query: 43 HNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
H+GP Y ++ L + R+ E + ++D+M S ++ R G+
Sbjct: 79 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+SLF + + + + LL + K+ K+ A + + V + + N L
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV-IYNTL 197
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
++ CQ R A +F++M + PD +Y+ L+ GLC + +A L+
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+++ + QKG D++ + +++ A C GKI +A+
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
IL+ ++ K + AP ++ + + + D E A L+ + G S+ +Y+ + L
Sbjct: 318 ILDDMIYKDV-APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE---------- 356
+I E ++++ +R +G P +V Y ++A G D+ALE+++E
Sbjct: 377 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 436
Query: 357 ------------------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+M+ P+ +Y I++ N + K+
Sbjct: 437 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 496
Query: 393 MSKQ 396
MS++
Sbjct: 497 MSEK 500
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y +++ GL R G+ +A +V +EM+ P TYN +I G G ++M
Sbjct: 18 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 77
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ P+I ++ L++ + C ++ R +++++S S
Sbjct: 78 LHDGPKPNIVTYNVLLSGL-CRAGRMDETRVLMDEMASHS 116
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 207/505 (40%), Gaps = 45/505 (8%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
FK+ E Y +G Y ++I L +S R E K ++D+M + V+A I +
Sbjct: 174 FKKDMEDY-GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R G +EA + K + +++ L++ + K +++ A +L +
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + NL+++ + A + EM+ G P+ +Y I++ GLC +A+ LL
Sbjct: 293 I-TYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + KG + +Y L+ C +G + A +I +K+ + + P + +
Sbjct: 352 EM----TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV-LPDLYCYNSLIFG 406
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ +E + + RG +P+ +YS + G + ++++ M G P+
Sbjct: 407 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466
Query: 331 LVMYEAKLAALFKD-----------------------------------GMVDEALEVIE 355
V+Y L + FK G ++ A V+
Sbjct: 467 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 526
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E G+ VP V VY+ L+ GLC + A L +MSK+ G N Y L+DGLC+
Sbjct: 527 EIEKNGS-VPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCK 584
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G A V +L + P TY LI G C +G A EM++ PD V
Sbjct: 585 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 644
Query: 476 WSSLVASVCCNTADLNVCRKTLEQL 500
+S L C + DL +E++
Sbjct: 645 YSVLTTG-CSSAGDLEQAMFLIEEM 668
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 174/414 (42%), Gaps = 45/414 (10%)
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I + DS +V + TY ++G++ +A + + + N LLK++++
Sbjct: 35 IHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR 94
Query: 128 ESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ A + +R G + + + + L++ C+ R D A V EM +GC +
Sbjct: 95 ADAM--ALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 152
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y++L+ GLC + EA + + G D Y L+ LC
Sbjct: 153 VTYNVLIAGLCRSGAVEEA----FGFKKDMEDYGLVPDGFTYGALINGLC---------- 198
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
KSRR AK+L++E P++ Y+ +
Sbjct: 199 -------------KSRRSN-------------EAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
EG E K++ EM G P+ + Y+ + L K G +D A ++ ++MV+ + P
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA-SLLLKQMVRDSHRPD 291
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
YN++++G N A L +M + G N TY I++ GLC+ G +AS +L
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EEM + P Y LI G C G A ++M LPD+ ++SL+
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 153/353 (43%), Gaps = 44/353 (12%)
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+AA ++ + G + I+ N L+ L + L V + M G PD +Y
Sbjct: 65 DAAEVVLMMRDRG--LAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 122
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L++ C R + A +L M ++G G + V Y L+ LC G +++A
Sbjct: 123 LIEAYCKVREFDTAKKVLVEM----RERGCGLNTVTYNVLIAGLCRSGAVEEAF------ 172
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
G K D ED G +P +Y A+ L R
Sbjct: 173 ---GFK--------------KDMEDY-------------GLVPDGFTYGALINGLCKSRR 202
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
E +LDEM P++V+Y + ++G DEA ++I+E MV P Y+
Sbjct: 203 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE-MVAAGVQPNKITYD 261
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L++GLC G A + LK+M + + TY ++++G R +A R+L EM
Sbjct: 262 NLVRGLCKMGQMDRASLLLKQMVRD-SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMEN 320
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY+++I GLC G+ +A LEEM ++ P+ V++ L++ C
Sbjct: 321 AGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 44/437 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ MI L +S + +++++M + V+A I Y R G ++ A +F +
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ N + +N+L+ + K ++E +
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEES-------------------------------- 416
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
F +M +G P+ +Y L+ G + L A L+ M G + V
Sbjct: 417 ----TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML----DTGLKPNDV 468
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
IY LL + I+ + +L +G+ +R + I + + ++E A +++E
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVML-DNRIYGILIHNLSSSGNMEAAFRVLSE 527
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P + YS++ L + +LDEM KG P++V Y A + L K G
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A V + KG VP Y L+ G C G+ + A YL G + Y
Sbjct: 588 ISYARNVFNSILAKG-LVPNCVTYTSLIDGSCKVGDISNA-FYLYNEMLATGITPDAFVY 645
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L G G +A ++EEM +R + + ++N L+ G C GK E + L ++
Sbjct: 646 SVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMG 704
Query: 467 QAKLPDISVWSSLVASV 483
+ +P+ ++++ +
Sbjct: 705 RGLVPNALTIENIISGL 721
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 184/425 (43%), Gaps = 41/425 (9%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
K F + +E+ N Y+ +I ++ + ++++ +M + D ++ +
Sbjct: 418 KYFAQMQER--GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 475
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+Y ++ + + S FK++ + + + L+ + +EAA R E
Sbjct: 476 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA----FRVLSEIEKN 531
Query: 149 SRIQSLNL---LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ +++ L+ LC+ + A + EM +G P+ Y+ L+ GLC ++ A
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ F I KG + V Y +L+ C G I +A + ++L G+ P + +
Sbjct: 592 RNV----FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI-TPDAFVYS 646
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C+ D+E A LI E +RG S++S++ + G++ E K+L + +
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 705
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEE------------------EMVKGTFVPTV 367
G P+ + E ++ L + G + E + E +M+ +P +
Sbjct: 706 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-L 764
Query: 368 RVYNILLKGLCDAGNSAVAVM---YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
V + +++ C GN A+M + S +GC +Y +VD LCR G+ EA
Sbjct: 765 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC----SSYLAIVDNLCRKGKLSEALN 820
Query: 425 VLEEM 429
+L+EM
Sbjct: 821 LLKEM 825
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 177/440 (40%), Gaps = 25/440 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I LS+ R+ E + QM+ + ++ I Y + G L A L + +
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ LL+ K +E F +S V + +L+ L
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-KSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A V E++ G PD Y L+ GLC +A +L M S+KG +IV
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM----SKKGVDPNIVC 574
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G I A + IL KGL + C G DI A L NE
Sbjct: 575 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG-DISNAFYLYNEM 633
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L G P YS + + G + + +++EM +G S+ + + K G +
Sbjct: 634 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKM 692
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQ---------- 396
E L+++ M +G VP ++ GL +AG S V ++++ K
Sbjct: 693 QETLKLLHVIMGRG-LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 751
Query: 397 --VGCVANGETYGILVDGL----CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ + G+ +VD + C++G +A + + ++ +S +Y ++ LC
Sbjct: 752 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 811
Query: 451 IGKQYEAVMWLEEMISQAKL 470
GK EA+ L+EM + L
Sbjct: 812 KGKLSEALNLLKEMDKRGNL 831
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 191/452 (42%), Gaps = 19/452 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + + + + P A + +E K + N VYA +I ++
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK--GLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ D+M + + + I ++ G++ E+ F + + + +++ L+
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLL-MDVLCQCRRSDLALHV---FQEMDFQG 181
+K LE+A L R + + ++ +++ +D+L +SD V F+ M QG
Sbjct: 443 LKNGDLESAEQLVQRM-----LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D Y IL+ L + + A + + I + GS D+ +Y +L+ LC
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAA----FRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ A IL+++ +KG+ + + C G DI A+++ N L +G +P+ +Y++
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG-DISYARNVFNSILAKGLVPNCVTYTS 612
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G I + +EM G P +Y G +++A+ +IEE ++G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
++ +N L+ G C G + L + + G V N T ++ GL G+ E
Sbjct: 673 H--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGR-GLVPNALTIENIISGLSEAGKLSE 729
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ E+ ++ ++ L + + GK
Sbjct: 730 VHTIFVELQQKTSESAARHFSSLFMDMINQGK 761
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 137/339 (40%), Gaps = 25/339 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +I LS S + V+ +++ + V+++ I + +A + +
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ +N L+ + K + A +F S + + L+D C+
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVF-NSILAKGLVPNCVTYTSLIDGSCKVGD 622
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A +++ EM G PD Y +L G + L +A L+ MF R I
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR-----GHASIS 677
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ C +GK+Q+ +++L I+ +GL P + + ++ + ++ E
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGL-VPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRI---VEGDKVLDEMRTKGFWPSLVM---------- 333
+ + +S++ +D+ N+G+I V D + D + +L++
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 796
Query: 334 -----YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
Y A + L + G + EAL +++E +G PT+
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 835
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 220/487 (45%), Gaps = 17/487 (3%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRH----NGPV-----YASMIGILSE 57
+ L P +L S + ++ + ++ H P + ++G L +
Sbjct: 22 QFLNPIFLIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVK 81
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+N + + + QM+ + + I +++ G + + S+F N+ + +
Sbjct: 82 ANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAIT 141
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
TL+K + + + A + F + S L++ LC+ ++ AL + + +
Sbjct: 142 LTTLIKGLCLKGDIHKA-LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI 200
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
D + D Y+ ++ G+C D+ +N+A + + + K +V Y TL+ LC
Sbjct: 201 DGKLVRLDVVMYNTIIDGVCKDKLVNDA----FDFYSEMVAKRICPTVVTYNTLICGLCI 256
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
G+++DA+ +L K++ + + + C +G+ ++ AK++ + + P++
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK-VKEAKNVFVVMMKKDVKPNIV 315
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+++ + + + + + M G P + Y ++ K MVDEA+++ EE
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
K F P V YN L+ GLC +G + A+ + +M + G N TY L+D LC++
Sbjct: 376 HCKQIF-PDVVTYNSLIDGLCKSGRISYALKLIGEMHDR-GQPPNIITYNSLLDALCKNH 433
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+A +L ++ + P V TYN+LI GLC G+ +A E+++ D+ ++
Sbjct: 434 HVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYN 493
Query: 478 SLVASVC 484
+++ C
Sbjct: 494 TMIKGFC 500
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 195/415 (46%), Gaps = 18/415 (4%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C S F+ + Y+ QL+ VS F +L Q N F +L +VK +
Sbjct: 32 CFTSYSSFSNSTTLYS---QLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIV 88
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+ R + S + +L++L++ Q + L+ VF + +G PD + L+K
Sbjct: 89 -VSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIK 147
Query: 195 GLCNDRRLNEATHL---LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
GLC +++A H + ++ ++++Q V YRTL+ LC G+ + A+++L +I
Sbjct: 148 GLCLKGDIHKALHFHDKVLALGFQLNQ-------VSYRTLINGLCKVGQTKAALEMLRRI 200
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
K ++ + I C D + + A +E + + P++ +Y+ + L G+
Sbjct: 201 DGKLVRLDVVMYNTIIDGVCKD-KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQ 259
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + +L +M + P++ + + A K+G V EA V M+K P + YN
Sbjct: 260 LKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVV-MMKKDVKPNIVTYN 318
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G C A M+ Q+G + +Y I++ G C+ EA ++ EEM
Sbjct: 319 SLMNGYCLVNEVNKAESIFNTMA-QIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHC 377
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ +P V TYN LI GLC G+ A+ + EM + + P+I ++SL+ ++C N
Sbjct: 378 KQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 12/338 (3%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TL+ + K + +AA + LR G V+ + N ++D +C+ + + A + E
Sbjct: 176 SYRTLINGLCKVGQTKAA-LEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M + P +Y+ L+ GLC +L +A LL+ M + + + L+ A C
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL----ENINPTVYTFSILVDAFC 290
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIP 294
+GK+++A + +++K +K + + C N+ + A+S+ N G P
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE---VNKAESIFNTMAQIGVAP 347
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SYS M + E K+ +EM K +P +V Y + + L K G + AL++I
Sbjct: 348 DVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLI 407
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E +G P + YN LL LC + A+ L K+ K + TY IL++GLC
Sbjct: 408 GEMHDRGQ-PPNIITYNSLLDALCKNHHVDKAIELLTKL-KDHNIQPSVCTYNILINGLC 465
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ GR +A +V E++L+ Y V TYN +I+G C G
Sbjct: 466 KSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 6/254 (2%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
GQL +A+ L + N +F+ L+ KE K++ A +F+ +VK I +
Sbjct: 258 GQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV-VMMKKDVKPNIVT 316
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N LM+ C + A +F M G PD SY I++ G C + ++EA L F
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL----F 372
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ K D+V Y +L+ LC G+I A++++ ++ +G + P + L
Sbjct: 373 EEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG-QPPNIITYNSLLDALCK 431
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
++ A L+ + PS+ +Y+ + L GR+ + KV +++ G+ +
Sbjct: 432 NHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYT 491
Query: 334 YEAKLAALFKDGMV 347
Y + K G V
Sbjct: 492 YNTMIKGFCKKGFV 505
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 222/502 (44%), Gaps = 18/502 (3%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAK---EKYPNYRHNGPVYASMIGILSESNR 60
++ L P + Q+IK QK+P AL F A NY H+ Y ++ +L
Sbjct: 107 QFAPFLNPXLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGL 166
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ ++ D A ++ Y G + A+ F + S+N
Sbjct: 167 FSTASSLLQSHH----RLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNA 222
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+L VK +++ A +F + VK + + ++ C+ + A +VF EM
Sbjct: 223 ILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM--- 279
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC P+ +Y+ ++ G C + A ++ M + D V Y TL+ C +G+
Sbjct: 280 GCKPNLVTYNTMINGFCKKGLMESAMKIVDQM---TETEDCMPDTVTYTTLIDGYCKRGE 336
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++AM+ +E+++ + + + I C +G +++ AK ++ + G ++A+++
Sbjct: 337 LEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNG-NVDEAKRMMTRMRLNGLKDNVATHT 395
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L G++ + + L EM G Y + K G D+A+ +++E +
Sbjct: 396 SILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR 455
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR-DGRF 419
G P+V +N + + L ++G + A + L++M KQ+GC N +Y ++DGLC+ GR
Sbjct: 456 G-INPSVSSFNAVFRILVESGKTDKAGLILRQM-KQLGCTPNFLSYSTVIDGLCKAKGRM 513
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
E +++M + Y+ L++G C G A+ EM+ + ++ + +
Sbjct: 514 HEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAF 573
Query: 480 VASVCCNTADLNVCRKTLEQLS 501
V + V K E++S
Sbjct: 574 VKGLSAKEKAFEV-EKFFEEMS 594
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN +L A +A ++ K+ + TY ++ G C+ G A V +EM
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM 279
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI-SQAKLPDISVWSSLVASVCCNTA 488
+ P + TYN +I G C G A+ +++M ++ +PD +++L+ C
Sbjct: 280 GCK---PNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGY-CKRG 335
Query: 489 DLNVCRKTLEQLSS 502
+L K +E++ S
Sbjct: 336 ELEEAMKYMEEMVS 349
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 28/439 (6%)
Query: 47 VYASMIG-ILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA----GQLNEAVS 101
VY +IG I S ++ ++ ++ G+ E + I ++R G+ +A +
Sbjct: 149 VYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYN 208
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ + + + T +++ ++ + SK+E A LF + + + L+D
Sbjct: 209 VIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLF-QEMKRNGIAPDVYVYTTLIDSF 267
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A + F EM+ GC P+ +Y L+ R++++A + M KG
Sbjct: 268 CKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML----SKGC 323
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH-RIDLCPCND------G 274
+IV Y L+ LC GKI+ A QI + + ++ ++ P H R+ N+ G
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383
Query: 275 EDIEG---------AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
++G A+ L+ + G P+ Y A+ G++ E +V M
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G+ P++ Y + + LFKD +D AL+V+ + M++ + P V +Y ++ GLC G +
Sbjct: 444 GYDPNVYTYSSLIDRLFKDKRLDLALKVLSK-MLENSCAPNVVIYTEMIDGLCKVGKTDE 502
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A L M ++ GC N TY ++DG + GR + +L++M + P TY VLI
Sbjct: 503 AYK-LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561
Query: 446 RGLCSIGKQYEAVMWLEEM 464
CS G EA LEEM
Sbjct: 562 NHCCSTGLLDEAHKLLEEM 580
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 197/464 (42%), Gaps = 29/464 (6%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
++ K ++ M + C +F + + Y R+G A L K + Q C +N
Sbjct: 92 KLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYN 151
Query: 120 TLLKEMVKESKLEAAHILFLRSCYG--WEVKSRIQSLNL--LMDVLCQCRRSDLALHVFQ 175
L+ + + + YG E + +N+ LC + + A +V +
Sbjct: 152 ILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIR 211
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
EM +G PD +Y ++ LCN ++ +A + +F + + G D+ +Y TL+ +
Sbjct: 212 EMMSKGFIPDTSTYSKVIGYLCNASKVEKA----FQLFQEMKRNGIAPDVYVYTTLIDSF 267
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G I+ A +++ R G AP + + + A + L +G P+
Sbjct: 268 CKAGFIEQARNWFDEMERDGC-APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW-----------------PSLVMYEAKL 338
+ +Y+A+ L G+I + ++ M+ + P++ Y A +
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
L K V EA ++++ V+G P VY+ L+ G C AG A M + G
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGC-EPNHVVYDALIDGCCKAGKLDEAQEVFTTML-ECG 444
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
N TY L+D L +D R A +VL +ML S P V Y +I GLC +GK EA
Sbjct: 445 YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 504
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
+ M + P++ +++++ + + C + L+Q+SS
Sbjct: 505 KLMVMMEEKGCNPNVVTYTAMIDGF-GKSGRVEKCLELLQQMSS 547
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 206/476 (43%), Gaps = 37/476 (7%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++F+E K + VY ++I ++ I + + D+M+ D C +
Sbjct: 241 AFQLFQEMKRN--GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTAL 298
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-------- 138
I Y ++ ++++A +++ + C ++ L+ + K K+E A ++
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Query: 139 --------LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
R G + + + L+D LC+ + A + + M +GC P+ Y
Sbjct: 359 EIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYD 418
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ G C +L+EA + +M + G ++ Y +L+ L ++ A+++L K
Sbjct: 419 ALIDGCCKAGKLDEAQEVFTTML----ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474
Query: 251 ILRKGLKAPKS--RRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+L AP ID LC ++ ++ E +G P++ +Y+AM
Sbjct: 475 MLENSC-APNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE---KGCNPNVVTYTAMIDGFG 530
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-T 366
GR+ + ++L +M +KG P+ V Y + G++DEA +++EE +K T+ P
Sbjct: 531 KSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE--MKQTYWPRH 588
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y +++G +A +YL + V Y +L+D + GR A +
Sbjct: 589 VAGYRKVIEGF---NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELN 645
Query: 427 EEMLIRSYWPCVE--TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EE+ S + + LI L K +A +MIS+ +P++S+ L+
Sbjct: 646 EELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLI 701
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V+Y ++ LC+ ++AM L + +R P +RI LC C + E + K
Sbjct: 41 DTVLYTKMISGLCEASLFEEAMDFLTR-MRASSCLPNVLTYRILLCGCLNKEKLGRCK-- 97
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++L M T+G +PS ++ + + A +
Sbjct: 98 ---------------------------------RILSMMITEGCYPSPRIFNSLVHAYCR 124
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK----QVGC 399
G A +++ ++MV+ P VYNIL+ G+C + V+ L + + + G
Sbjct: 125 SGDYAYAYKLL-KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGV 183
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
V N LC G+F +A V+ EM+ + + P TY+ +I LC+ K +A
Sbjct: 184 VLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
+EM PD+ V+++L+ S C
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFC 268
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L K G EAL ++E+E FVP +Y ++ GLC+A A+ +L +M + C
Sbjct: 19 SLCKSGKWREALSLLEKE----EFVPDTVLYTKMISGLCEASLFEEAMDFLTRM-RASSC 73
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ N TY IL+ G + R+L M+ +P +N L+ C G A
Sbjct: 74 LPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYK 133
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L++M+ P V++ L+ +C
Sbjct: 134 LLKKMVQCGCQPGYVVYNILIGGIC 158
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 191/434 (44%), Gaps = 8/434 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG + + + + + +QMK + T I Y + G L+E+V LF+ +
Sbjct: 134 TYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM 193
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N L+ K + A F R ++K + S + L+D LC+
Sbjct: 194 KFMGCEPDVITYNALINSFCKFKGMLRA-FEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A+ F +M G P+ +Y L+ C L EA L M Q+ +IV
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML----QEHVDLNIV 308
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TLL LC++G + +A ++ + + G+ P + + + ++ A L NE
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGV-TPNLQAYTALIHGHIKVRSMDKAMELFNE 367
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P + + + L +E ++ E ++ EM+ G + V+Y + A FK G
Sbjct: 368 MREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN 427
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
EA+ ++EE GT V TV + L+ GLC G A+ Y +M N Y
Sbjct: 428 RTEAINLLEEMRDLGTEV-TVVTFCALIDGLCKRGLVQEAIYYFGRMPDH-DLQPNVAVY 485
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+DGLC++ +A ++ +EM ++ P Y +I G G EA+ +M+
Sbjct: 486 TALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMME 545
Query: 467 QAKLPDISVWSSLV 480
D+ ++SLV
Sbjct: 546 MGIELDLYAYTSLV 559
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 8/397 (2%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
++AG+ + + F+++ ++N ++ + KE + A LF +
Sbjct: 108 SKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLF-EQMKKMGLTPD 166
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N L+D + D ++ +F+EM F GC PD +Y+ L+ C + + A +
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRA----F 222
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
F + K +++ Y TL+ ALC +G +Q A++ + R GL + +
Sbjct: 223 EFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDAN 282
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G ++ A L +E L ++ +Y+ + L EG + E +++ M G P+
Sbjct: 283 CKAG-NLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
L Y A + K +D+A+E+ E M + P + ++ ++ GLC + +
Sbjct: 342 LQAYTALIHGHIKVRSMDKAMELFNE-MREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M K+ G AN Y L+D + G EA +LEEM V T+ LI GLC
Sbjct: 401 TEM-KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCK 459
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
G EA+ + M P+++V+++L+ +C N
Sbjct: 460 RGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 43/374 (11%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
CV F+ L +V+ LEAA FLR + V + +S N + L + DL+
Sbjct: 58 CVPGFGVFDALFSVLVELGMLEAAGQCFLRMT-KFRVLPKARSCNAFLHRLSKAGEGDLS 116
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
F++M G P +Y+I++ +C + + A S+F ++ + G DIV Y T
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTAR----SLFEQMKKMGLTPDIVTYNT 172
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ G + +++ + E++ G +
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCE--------------------------------- 199
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P + +Y+A+ ++ + EM+ K P+++ Y + AL K+GM+ A
Sbjct: 200 ---PDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMA 256
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ +M + +P Y+ L+ C AGN A M +M ++ N TY L+
Sbjct: 257 IKFF-VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE-HVDLNIVTYTTLL 314
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DGLC +G EA + M P ++ Y LI G + +A+ EM +
Sbjct: 315 DGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIK 374
Query: 471 PDISVWSSLVASVC 484
PDI +W ++V +C
Sbjct: 375 PDILLWGTIVWGLC 388
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 169/435 (38%), Gaps = 80/435 (18%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L K K L A + F+E K+K + + N Y+++I L + +
Sbjct: 200 PDVITYNALINSFCKFKGMLRAFEFFREMKDK--DLKPNVISYSTLIDALCKEGMMQMAI 257
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ M + +++ I +AG L EA L + Q + ++ TLL +
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+E + A LF R+ V +Q+ L+ + R D A+ +F EM + PD
Sbjct: 318 CEEGMMNEAEELF-RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ ++ GLC++ +L E ++ M + G G + VIY TL+ A G +A+
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEM----KESGIGANPVIYTTLMDAYFKAGNRTEAI 432
Query: 246 QILEK-------------------ILRKGLKAPK----SRRHRIDLCP-------CNDG- 274
+LE+ + ++GL R DL P DG
Sbjct: 433 NLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGL 492
Query: 275 ---EDIEGAKSLINEALIRGGIPSLASYSAM-------------------------AIDL 306
I AK L +E + IP +Y+AM +DL
Sbjct: 493 CKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDL 552
Query: 307 YNE----------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----E 352
Y G++ + K L EM KG P + L ++ G +DEA+ E
Sbjct: 553 YAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNE 612
Query: 353 VIEEEMVKGTFVPTV 367
++E+ ++ G P V
Sbjct: 613 LVEKGLIHGNSNPAV 627
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 12/381 (3%)
Query: 101 SLFKNLSQFNCVNWTQS-FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+F LS+ +T + F L+ + +E A ++ Y +V +Q+ N+++D
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVY----YKMDVLPAMQACNMVLD 166
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + R D V+ +M +G P+ +Y L+ G C +A + +F + +K
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKA----FRLFDEMIEK 222
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+VIY L+ LC + +I +A + + G+ P + + ++
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKK 281
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E L G +P++ ++ + L +V K L +M + G P++ +Y +
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G + EAL + E+ K +P V Y+IL+KGLC A L++M K+ G
Sbjct: 342 GYCKAGNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK-GF 399
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ N TY L+DG C++G +A V +M + P + T++ LI G C GK A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 460 WLEEMISQAKLPDISVWSSLV 480
EM+ + LPD+ +++L+
Sbjct: 460 LYTEMVIKGLLPDVVAYTALI 480
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 188/418 (44%), Gaps = 25/418 (5%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
+S + +VF I ++ G + EA+ ++ + + + Q+ N +L +VK+ + +
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDT 176
Query: 134 AHILFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDL--ALHVFQEMDFQGCYPDR 186
+ YG ++ +R S N+ L+D C R+ D A +F EM + +P
Sbjct: 177 -----MWKVYG-DMVARGASPNVVTYGTLIDGCC--RQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y IL++GLC + R++EA SMF + G ++ Y T++ C ++ A++
Sbjct: 229 VIYTILIRGLCGESRISEAE----SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ +++L GL + C E + K LI+ A G +P++ Y+ +
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF-GVVPNIFVYNCLIDGY 343
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + E + E+ P + Y + L ++EA + + +EM K F+P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKKGFLPN 402
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
YN L+ G C GN A+ +M+++ G N T+ L+DG C+ G+ A +
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+I+ P V Y LI G G EA +EM P++ S L+ +C
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 168/404 (41%), Gaps = 43/404 (10%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + R M +V M + T I R G +A LF + +
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ L++ + ES++ A +F R+ + + + N +MD C+ AL ++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMF-RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
QEM G P+ ++ IL+ GLC + A L M + G +I +Y L+
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM----ASFGVVPNIFVYNCLIDG 342
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C G + +A+ + +I +H I +P
Sbjct: 343 YCKAGNLSEALSLHSEI----------EKHEI--------------------------LP 366
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +YS + L R+ E D +L EM+ KGF P+ V Y + K+G +++A+EV
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ KG P + ++ L+ G C AG A+ +M + G + + Y L+DG
Sbjct: 427 SQMTEKG-IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHF 484
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+DG EA R+ +EM P V T + LI GLC G+ +A+
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 164/355 (46%), Gaps = 27/355 (7%)
Query: 142 CYGWEVKSRIQS-------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
C + V SR++S +L+ + + AL V+ +MD P ++ ++++
Sbjct: 110 CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLD 166
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GL R + ++ ++ + +G+ ++V Y TL+ C QG A ++ ++++ K
Sbjct: 167 GLVKKGRFDT----MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 255 GLKAPKSRRHRI---DLCPCNDGED-IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ P + I LC GE I A+S+ G +P+L +Y+ M
Sbjct: 223 KI-FPTVVIYTILIRGLC----GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK-DGMVDEALEVIEEEMVKGTFVPTVRV 369
+ + ++ EM G P++V + + L K D MV +I+ M VP + V
Sbjct: 278 HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID--MASFGVVPNIFV 335
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ G C AGN + A+ ++ K + + TY IL+ GLC R EA +L+EM
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + P TYN LI G C G +A+ +M + P+I +S+L+ C
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T L +Q L A ++F E EK +P +Y +I L +RI+E
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV----IYTILIRGLCGESRISE 246
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + M+ + T + Y + + +A+ L++ + + +F L+
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ K ++ +A FL + V I N L+D C+ AL + E++
Sbjct: 307 GLCKTDEMVSAR-KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y IL+KGLC R+ EA LL M +KG + V Y TL+ C +G ++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++ ++ KG++ + C G+ +E A L E +I+G +P + +Y+A+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK-MEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +G E ++ EM+ G P++ + L KDG + +A+++
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 22/405 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HI 136
+ T I+ ++++A LF + + C ++ TL+K + + + A +
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L S YG K + S ++++D LC+ RR D A +F+EM QG P SY LM
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--- 284
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
EA L F + +G ++V + L+ LC +GK+ +A +LE ++++G+
Sbjct: 285 -----WEEAKRL----FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 335
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C G D+ A+ L +G P + Y+ + ++ E
Sbjct: 336 VPNLLTYNSLIEGFCLVG-DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 394
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP-TVRVYNILLK 375
K+ + M G P + Y A L LF+ G V +A ++ V G +P + +Y I L
Sbjct: 395 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG--IPGDLYIYGIFLN 452
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC G A+ K+ K + E + L+DGLC+ G+ A + E++
Sbjct: 453 GLCKNGCLFEAMELFNKL-KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TYN++I C G+ +A + ++M PD +++L+
Sbjct: 512 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 556
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 203/458 (44%), Gaps = 35/458 (7%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVI---DQMK--GDSCECKDSVFATAIRTYARAGQ 95
Y + P +S +LS +I +V +QM+ G S +C + +
Sbjct: 89 YSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC--CTLNILLNCLCNVNR 146
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+ E +++ + + + ++ TL+K + E ++ A +LF R + I +
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAI-TYG 205
Query: 156 LLMDVLCQCRRSDLALHVFQEM---------DFQGCYPDRESYHILMKGLCNDRRLNEAT 206
LM LC+ +AL + QEM +F+ P SY I++ LC DRR +EA
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK---PVVISYSIIIDALCKDRREDEAR 262
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L F + +G ++ Y +L++ ++A ++ +++ +G++ + +
Sbjct: 263 DL----FEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVL 310
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G+ IE AK L+ + RG +P+L +Y+++ G + ++ M +KG
Sbjct: 311 IDVLCKEGKVIE-AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P ++ Y + K V+EA+++ + G P V+ Y LL GL G A
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGKVGDA 428
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
M K G + YGI ++GLC++G EA + ++ + +E +N LI
Sbjct: 429 KKLFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLID 487
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK A E++ + PD+ ++ ++ C
Sbjct: 488 GLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + Y +++ L + ++ + K++ MK ++ + + G L EA+
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF L +N + FN L+ + K KLE A LF E++ + + N+++
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF-EKLPQEELQPDVVTYNIMIHEF 524
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
C+ + A +FQ+M+ GC PD+ +Y L++G ++L + LL+ M R
Sbjct: 525 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 212/479 (44%), Gaps = 51/479 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L L+ ++K P TA+ +F++ + + + + ++ + IT +
Sbjct: 9 PILQFNHILASLVKINHYP-TAISLFRQLE--FNGIKPSIVTLTILMNCYCHTGGITFLF 65
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKE 124
++ ++ E F T I+ GQ EA+ LF + + Q S+ L+
Sbjct: 66 SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-LFHDHVVAHGFKLDQVSYAILMNG 124
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K + AA + ++ W V + + + ++D LC+ + A ++ EM +G +P
Sbjct: 125 LCKMGETRAAMQMLRKT---W-VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ ++ IL+ LC DR+ +A +LL M +KG ++V Y ++ C ++ A
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMM----KKGVKPNVVTYGAIMDGYCLVNQVNKA 236
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ I ++++G++ P++ Y+ +
Sbjct: 237 LNIFNVMVQEGVE------------------------------------PNVWCYNIIIN 260
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + R+ E + EM K P +V Y + L K G + +LE+++E G V
Sbjct: 261 GLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV 320
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
+ YN LL LC + A+ +K++ Q G N TY L+DGLC+DGR +A
Sbjct: 321 DII-TYNSLLHALCKNHHLDQAITLVKEIKDQ-GIQPNVCTYTTLIDGLCKDGRLEDAYV 378
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ +E+L Y V TYNV+I GLC G EA+ L M A +PD + +++ ++
Sbjct: 379 IFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYAL 437
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 12/337 (3%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I N ++ L + A+ +F++++F G P + ILM C+ + L+
Sbjct: 10 ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGIT----FLF 65
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ +I + G + + + TL+ +C G+ +A+ + ++ G K + +
Sbjct: 66 SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGL 125
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV-EGDKVLDEMRTKGFWP 329
C GE A ++ + + + YS + ID +G+ V + ++ EM KG +P
Sbjct: 126 CKMGE-TRAAMQMLRKTWVNADV---VMYSTI-IDSLCKGKFVTDAYRLYSEMIAKGIFP 180
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++ + + AL KD +A+ ++ M KG P V Y ++ G C A+
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGV-KPNVVTYGAIMDGYCLVNQVNKALNI 239
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M ++ G N Y I+++GLC+ R EA + +EM + P V TYN+LI GLC
Sbjct: 240 FNVMVQE-GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLC 298
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+GK ++ ++EM S K DI ++SL+ ++C N
Sbjct: 299 KLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKN 335
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 174/375 (46%), Gaps = 27/375 (7%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
FN +L +VK + A LF R +K I +L +LM+ C + ++
Sbjct: 13 FNHILASLVKINHYPTAISLF-RQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKI 71
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G P+ ++ L+KG+C + + EA LL+ + G D V Y L+ LC
Sbjct: 72 LKMGYEPNSITFTTLIKGMCLNGQAYEA--LLFHD--HVVAHGFKLDQVSYAILMNGLCK 127
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G+ + AMQ+L K S ID LC G+ + A L +E + +G P++
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTI--IDSLC---KGKFVTDAYRLYSEMIAKGIFPNV 182
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++S + L + + + +L M KG P++V Y A + V++AL +
Sbjct: 183 YTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242
Query: 357 EMVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
MV+ P V YNI++ GLC D + M+ KK++ V TY IL+D
Sbjct: 243 -MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDV------VTYNILID 295
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVE--TYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
GLC+ G+ + +++EM RS V+ TYN L+ LC +A+ ++E+ Q
Sbjct: 296 GLCKLGKISTSLELVDEM--RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGI 353
Query: 470 LPDISVWSSLVASVC 484
P++ +++L+ +C
Sbjct: 354 QPNVCTYTTLIDGLC 368
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V+ + N++++ LC+ +R D A+++F+EM ++ PD +Y+IL+ GLC +++ +
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ M G DI+ Y +LL ALC + A+ ++++I +G++ +
Sbjct: 308 ELVDEM----RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C DG +E A + E L G ++ +Y+ M L +G E +L M
Sbjct: 364 IDGLCKDGR-LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNA 422
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
P V YE + AL + G + +++ +V+G
Sbjct: 423 CIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 108/243 (44%), Gaps = 7/243 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L + R+ E + +M + I + G+++ ++ L +
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N+LL + K L+ A I ++ ++ + + L+D LC+ R
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQA-ITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRL 373
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A +FQE+ +G + +Y++++ GLC +EA LL R+ D V
Sbjct: 374 EDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS----RMEDNACIPDAVS 429
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T+++AL ++G+ ++L ++ +GL K + ++++ D D A + + +
Sbjct: 430 YETIIYALSEKGETVKTNKLLCAMIVRGLS--KRLKKKVNMTTIADLNDKWAAYASLEDG 487
Query: 288 LIR 290
+I
Sbjct: 488 MIH 490
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K+K A+ +FKE K N + Y +I L + +I+ E++D+M+
Sbjct: 264 KKKRVDEAMNLFKEMHWKKIN--PDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVD 321
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+ + + + L++A++L K + ++ TL+ + K+ +LE A+++F
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 140 RSCY-GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
G+ + + + N++++ LC+ D AL + M+ C PD SY ++ L
Sbjct: 382 EILTEGYHI--TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439
Query: 199 DRRLNEATHLLYSMFWR 215
+ LL +M R
Sbjct: 440 KGETVKTNKLLCAMIVR 456
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 214/500 (42%), Gaps = 37/500 (7%)
Query: 9 LTPTYLSQIIKKQK---SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
LTP +L +I SP + L FK ++ ++R + Y +M L ++E +
Sbjct: 65 LTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQH-HFRLSIHSYCTMTHFLCTHKMLSEAQ 123
Query: 66 EVI-----------------DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++ ++ + VF+ + Y +G ++A+ F+ + +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
N S L ++K + L + F + N+LM LC+ + +
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLN-LTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F E+ +G P S++ L+ G C L++ L M + D+ Y
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM----ENRVFPDVFTY 298
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL---IN 285
L+ LC +G++ DA ++ ++ +GL P + +G + G L I
Sbjct: 299 SVLINGLCKEGQLDDANKLFLEMCDRGL-VPND----VTFTTLINGHCVTGRADLGMEIY 353
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ ++R G+ P + +Y+ + L G + E K++ EM +G P Y + K+
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G ++ ALE I +EMVK + L+ G C G A L++M + G +
Sbjct: 414 GDLESALE-IRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML-EAGIKPDDA 471
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY +++ G C+ G ++L+EM + P V TYNVL+ GLC G+ A M L+ M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Query: 465 ISQAKLPDISVWSSLVASVC 484
++ +PD ++ L+ C
Sbjct: 532 LNLGVVPDDITYNILLEGHC 551
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 23/372 (6%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALH 172
FN L+ + KE K+ A +LF E+ R + S N L++ C+ D
Sbjct: 228 FNVLMHRLCKEHKINEAQLLF------GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ + M +PD +Y +L+ GLC + +L++A L F + +G + V + TL+
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL----FLEMCDRGLVPNDVTFTTLI 337
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
C G+ M+I +++LRKG+K + + C G D+ AK L+ E RG
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG-DLREAKKLVIEMTQRGL 396
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P +Y+ + EG + ++ EM +G V + A ++ ++G V EA E
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA-E 455
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
EM++ P Y +++ G C G+ LK+M G V TY +L++G
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCD-GHVPGVVTYNVLLNG 514
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-P 471
LC+ G+ A+ +L+ ML P TYN+L+ G C G + + +++ S+ L
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED----FDKLQSEKGLVQ 570
Query: 472 DISVWSSLVASV 483
D ++SL+ +
Sbjct: 571 DYGSYTSLIGDL 582
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 200/428 (46%), Gaps = 45/428 (10%)
Query: 92 RAGQLNEAVSLFKNLSQFNCV-NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R+G+ ++A+ +F + V NW ++NT++ VK LEA L + + K
Sbjct: 206 RSGKGSDALKVFDEMVDMGVVPNWI-TYNTMIDGHVKGGDLEAGFRLRDQMLHDGP-KPN 263
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N+L+ LC+ R D + EM +PD +Y IL GL R E+ +L
Sbjct: 264 IVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT---RTGESRTML- 319
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-------------- 256
S+F +KG LL LC GK+ A Q+LE ++ GL
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 379
Query: 257 -------------KAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSL 296
+ KSR R D N +G E + A+ L+ E G PS+
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439
Query: 297 ASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+++ + ID Y G++ + VL +M+ KG ++ + + + A K+G + EA+ +++
Sbjct: 440 ETFNTL-IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ M+ P +VYN ++ ++G++ A + ++KM K G A+ TY +L+ GLCR
Sbjct: 499 D-MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM-KNSGVSASIVTYNLLLKGLCR 556
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+ EA ++ + + P V +YN +I C+ G +A+ L+EM P +
Sbjct: 557 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 476 WSSLVASV 483
+ +LV+++
Sbjct: 617 YHTLVSAL 624
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKSRRHRI--- 266
+ F + G+ D + ++ A G + A+ ++ ++ R +G P + + +
Sbjct: 143 AAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIA 202
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L G D A + +E + G +P+ +Y+ M G + G ++ D+M G
Sbjct: 203 GLWRSGKGSD---ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V Y L+ L + G +DE V+ +EM + P Y+IL GL G S
Sbjct: 260 PKPNIVTYNVLLSGLCRAGRMDET-RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT- 317
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ L S + G + T IL++GLC+DG+ +A +VLE ++ P YN LI
Sbjct: 318 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 377
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C + A E+M S+ PD +++L+ +C
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 415
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 170/424 (40%), Gaps = 72/424 (16%)
Query: 43 HNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
H+GP Y ++ L + R+ E + ++D+M S ++ R G+
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+SLF + + + + LL + K+ K+ A + + V + + N L
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV-IYNTL 375
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
++ CQ R A +F++M + PD +Y+ L+ GLC + +A L+
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+++ + QKG D++ + +++ A C GKI +A+
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
IL+ ++ K + AP ++ + + + D E A L+ + G S+ +Y+ + L
Sbjct: 496 ILDDMIYKDV-APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE---------- 356
+I E ++++ +R +G P +V Y ++A G D+ALE+++E
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614
Query: 357 ------------------------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+M+ P+ +Y I++ N + K+
Sbjct: 615 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Query: 393 MSKQ 396
MS++
Sbjct: 675 MSEK 678
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 203/432 (46%), Gaps = 11/432 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ +L +SN + V ++ KG+ + F I+ G L++ + +
Sbjct: 132 TFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 190
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + TL+ K +E LF + +V + + +L++ +
Sbjct: 191 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG-ELDVVANQYTYTVLINGFFKMGL 249
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ ++++M G P+ +Y+ ++ CND +LN A + +F + ++G ++V
Sbjct: 250 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA----FELFDEMRERGVACNVV 305
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC + ++ +A +++ ++ R GL + + C+ G +++ A SL N+
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIG-NLDKASSLFNQ 364
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEG-DKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G PSLA+Y+ + I ++E + G ++ EM +G PS V Y + AL +
Sbjct: 365 MKSSGQSPSLATYNIL-IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 423
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+++A + I M K V + +Y +L+ GLC G+ A K + ++ N
Sbjct: 424 NIEKAFQ-IYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD-EMHLKPNDVI 481
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G C++G A R+L+EM P V +YN I+ LC K EA + L++MI
Sbjct: 482 YNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMI 541
Query: 466 SQAKLPDISVWS 477
P IS+W+
Sbjct: 542 ELGLKPSISIWN 553
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 189/451 (41%), Gaps = 54/451 (11%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
DS + I + R+ +A+ F + V + +FN LL ++K + E
Sbjct: 89 DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
A +F + VK + S +++ C+ D V +M+ G P+ Y L+
Sbjct: 149 AWRVFNET--KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 206
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV----IYRTLLFALCDQGKIQDAMQIL 248
G C + + L Y M GE D+V Y L+ G +D +++
Sbjct: 207 DGCCKNGDIERGKQLFYKM---------GELDVVANQYTYTVLINGFFKMGLKKDGIELY 257
Query: 249 EKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK+ G+ P + +C C NDG+ + A L +E RG ++ +Y+ + L
Sbjct: 258 EKMKLTGI-VPNVYTYNSMICRCCNDGK-LNNAFELFDEMRERGVACNVVTYNTLIGGLC 315
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
E R++E ++++ M+ G P+L+ Y + G +D+A + + G P++
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ-SPSL 374
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMS--------------------------------- 394
YNIL+ G +A NSA +++M
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434
Query: 395 -KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G VA+ YG+L+ GLC G EAS++ + + P YN +I G C G
Sbjct: 435 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 494
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y A+ L+EM +P+++ ++S + +C
Sbjct: 495 SYRALRLLKEMGENGMVPNVASYNSTIQILC 525
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G+LN A LF + + ++NTL+ + +E ++ A L R + + S
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG-LSPNLIS 341
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+D C D A +F +M G P +Y+IL+ G + T ++ M
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM- 400
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPC 271
+G V Y L+ AL I+ A QI + + GL A + LC
Sbjct: 401 ---EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV 457
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D ++ ++E ++ P+ Y+ M EG ++L EM G P++
Sbjct: 458 GDMKEASKLFKSLDEMHLK---PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 514
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
Y + + L KD EA EV+ ++M++ P++ ++N++ K D
Sbjct: 515 ASYNSTIQILCKDEKWTEA-EVLLKDMIELGLKPSISIWNMISKARFD 561
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 43/319 (13%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
A ++F E +E+ N Y ++IG L + R+ E + ++ +MK D + T
Sbjct: 287 NAFELFDEMRER--GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y G L++A SLF + ++N L+ E+K A +R
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF-SEAKNSAGVTDMVREMEAR 403
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + +LMD L + + A ++ M+ G D Y +L+ GLC + EA
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ L F + + + VIY T+++ C +G A+++L+++
Sbjct: 464 SKL----FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM-------------- 505
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
GE+ G +P++ASY++ L + + E + +L +M
Sbjct: 506 --------GEN--------------GMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIEL 543
Query: 326 GFWPSLVMYEAKLAALFKD 344
G PS+ ++ A F +
Sbjct: 544 GLKPSISIWNMISKARFDN 562
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 209/471 (44%), Gaps = 23/471 (4%)
Query: 33 EAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI----- 87
+ K ++P + G + S + + R + +E++ + S + VF +I
Sbjct: 220 QPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLV---SKFAEHEVFPNSIWLTQL 276
Query: 88 -RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
R+G+ + A + L + V S N LL + + + + + L L +
Sbjct: 277 ISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL-LAEMKEMD 335
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY-----PDRESYHILMKGLCNDRR 201
++ + + +L++ LC+ RR D AL VF++M+ PD +Y+ L+ GLC R
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
E L+ M SQ + V Y L+ C I+ A ++ +++ + G+
Sbjct: 396 QEEGLGLVERMR---SQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G I GA NE +G + +Y+A+ N I + ++ DE
Sbjct: 453 TLNTLVDGMCKHGR-INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE 511
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P ++Y ++ L + G +D A V+ + M + F P + +N+L+ G C
Sbjct: 512 MLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK-MKEAGFSPDIVSFNVLINGFCRKN 570
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A LK+M + G +G TY L+ + G F A R++++M+ P V TY
Sbjct: 571 KLDEAYEMLKEM-ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC-CNTADL 490
LI C G EA+ +M S +K+ P+ +++ L+ S+C N DL
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 13/395 (3%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SCYGWE 146
RA + +L + + + +F L+ + K +++ A +F + G+
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCNDRRLNEA 205
V+ + + N L+D LC+ R + L + + M Q C P+ +Y+ L+ G C + A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L F ++++ G ++V TL+ +C G+I A++ ++ KGLK
Sbjct: 436 REL----FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ CN +IE A L +E L G P Y + L G++ VL +M+
Sbjct: 492 LIRAFCN-VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P +V + + + +DEA E+++E M P YN L+ G+ +
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKE-MENAGIKPDGVTYNTLISHFSKTGDFST 609
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS-YWPCVETYNVL 444
A +KKM K+ G V TYG L+ C +G EA ++ +M S P YN+L
Sbjct: 610 AHRLMKKMVKE-GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
I LC + A+ +++M + P+ + ++++
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 183/445 (41%), Gaps = 48/445 (10%)
Query: 34 AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS-----CECKDSVFATAIR 88
A+ K + + N + +I L + R+ E EV ++M G E + T I
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 89 TYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G+ E + L + + SQ C+ T ++N L+ K S +EAA LF + V
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDG-V 447
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ +LN L+D +C+ R + A+ F EM +G + +Y L++ CN + +A
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L M + G D ++Y TL+ L GK+ A +L K+ G
Sbjct: 508 LFDEML----EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS---------- 553
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
P + S++ + + ++ E ++L EM G
Sbjct: 554 --------------------------PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGI 587
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P V Y ++ K G A ++++ MVK VPTV Y L+ C GN A+
Sbjct: 588 KPDGVTYNTLISHFSKTGDFSTAHRLMKK-MVKEGLVPTVVTYGALIHAYCLNGNLDEAM 646
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+ MS N Y IL++ LCR + A ++++M ++ P T+N + +G
Sbjct: 647 KIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG 706
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPD 472
L +A ++ M A PD
Sbjct: 707 LQEKNWLSKAFELMDRMTEHACNPD 731
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 10/356 (2%)
Query: 153 SLNLLMDVLCQCR---RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
S N L+ L + R R + L +EMD Q P+ ++ IL+ LC RR++EA +
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQ---PNVVTFGILINHLCKFRRVDEALEVF 363
Query: 210 YSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M S E D++ Y TL+ LC G+ ++ + ++E++ + P + + +
Sbjct: 364 EKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLI 423
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
IE A+ L ++ G P++ + + + + GRI + +EM+ KG
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
+ V Y A + A +++A+E+ +E M++ P VY L+ GL AG A
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDE-MLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L KM K+ G + ++ +L++G CR + EA +L+EM P TYN LI
Sbjct: 543 VLSKM-KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
G A +++M+ + +P + + +L+ + C N +L+ K +SS S
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN-GNLDEAMKIFRDMSSTS 656
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 144/355 (40%), Gaps = 54/355 (15%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEM-----DFQGCYPDRESYHILMKGLCNDRRLNEAT--H 207
N+L+DVL + R D ALH+ EM +F P+ + HI+ L ++ A
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFP---PNSNTGHIVFSALSKRDKVGRAVDEE 252
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ + + ++ + + L+ LC G+ A +L +++
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMK-------------- 298
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
GG+ AS +A+ L + +L EM+
Sbjct: 299 ----------------------LGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDI 336
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEE---EMVKGTFV-PTVRVYNILLKGLCDAGNS 383
P++V + + L K VDEALEV E+ G V P V YN L+ GLC G
Sbjct: 337 QPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ +++M Q C+ N TY L+DG C+ A + ++M P V T N
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
L+ G+C G+ AV + EM + + +++L+ + C ++N K +E
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC----NVNNIEKAME 507
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 122/286 (42%), Gaps = 5/286 (1%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ + + RI E ++M+G + + IR + + +A+ LF + +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C + TL+ + + KL+ A + L I S N+L++ C+ + D
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFV-LSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + +EM+ G PD +Y+ L+ + A L+ M ++G +V Y
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV----KEGLVPTVVTYG 630
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ A C G + +AM+I + P + + I + ++ A SL+++ +
Sbjct: 631 ALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV 690
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+G P+ +++AM L + + + +++D M P + E
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITME 736
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 12/381 (3%)
Query: 101 SLFKNLSQFNCVNWTQS-FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+F LS+ +T + F L+ + +E A ++ Y +V +Q+ N+++D
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVY----YKMDVLPAMQACNMVLD 166
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + R D V+ +M +G P+ +Y L+ G C +A + +F + +K
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKA----FRLFDEMIEK 222
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+VIY L+ LC + +I +A + + G+ P + + ++
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKK 281
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E L G +P++ ++ + L +V K L +M + G P++ +Y +
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G + EAL + E+ K +P V Y+IL+KGLC A L++M K+ G
Sbjct: 342 GYCKAGNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK-GF 399
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ N TY L+DG C++G +A V +M + P + T++ LI G C GK A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 460 WLEEMISQAKLPDISVWSSLV 480
EM+ + LPD+ +++L+
Sbjct: 460 LYTEMVIKGLLPDVVAYTALI 480
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 204/476 (42%), Gaps = 36/476 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T L +Q L A ++F E EK +P +Y +I L +RI+E
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV----VIYTILIRGLCGESRISE 246
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + M+ + T + Y + + +A+ L++ + + +F L+
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ K ++ +A FL + V I N L+D C+ AL + E++
Sbjct: 307 GLCKTDEMVSAR-KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y IL+KGLC R+ EA LL M +KG + V Y TL+ C +G ++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++ ++ KG++ + C G+ +E A L E +I+G +P + +Y+A+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK-MEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ +G E ++ EM+ G P++ + L KDG + +A+++ + K
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF---LAKTGT 537
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
T N L + LC N Y L+ GLC DGR +AS
Sbjct: 538 DTTGSKTNELDRSLCS---------------------PNHVMYTALIQGLCTDGRIFKAS 576
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ +M P V T V+I+G + +M +++ +P+ SV+ L
Sbjct: 577 KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 188/418 (44%), Gaps = 25/418 (5%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
+S + +VF I ++ G + EA+ ++ + + + Q+ N +L +VK+ + +
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDT 176
Query: 134 AHILFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDL--ALHVFQEMDFQGCYPDR 186
+ YG ++ +R S N+ L+D C R+ D A +F EM + +P
Sbjct: 177 -----MWKVYG-DMVARGASPNVVTYGTLIDGCC--RQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y IL++GLC + R++EA SMF + G ++ Y T++ C ++ A++
Sbjct: 229 VIYTILIRGLCGESRISEAE----SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ +++L GL + C E + K LI+ A G +P++ Y+ +
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF-GVVPNIFVYNCLIDGY 343
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + E + E+ P + Y + L ++EA + + +EM K F+P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKKGFLPN 402
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
YN L+ G C GN A+ +M+++ G N T+ L+DG C+ G+ A +
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+I+ P V Y LI G G EA +EM P++ S L+ +C
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 33/410 (8%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--------------C 142
N+A+ LF ++S+ + + + ++ +KL A +R C
Sbjct: 51 NQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICC 110
Query: 143 YGWEVKSRIQS-------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ V SR++S +L+ + + AL V+ +MD P ++ ++++ G
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDG 167
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R + ++ ++ + +G+ ++V Y TL+ C QG A ++ ++++ K
Sbjct: 168 LVKKGRFDT----MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + I + I A+S+ G +P+L +Y+ M + +
Sbjct: 224 I-FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFK-DGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ EM G P++V + + L K D MV +I+ M VP + VYN L+
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID--MASFGVVPNIFVYNCLI 340
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C AGN + A+ ++ K + + TY IL+ GLC R EA +L+EM + +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TYN LI G C G +A+ +M + P+I +S+L+ C
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 203/476 (42%), Gaps = 49/476 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S+++ E +V +M C + I T +AG+ NEA +F L
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ N ++NTLL + +E K+ E H+L + + + + N ++D LC+
Sbjct: 558 KEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSY--PPNLITYNTVLDCLCKNG 615
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ AL + M +GC PD SY+ + GL + RL EA + M +K D
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-----KKVLAPDY 670
Query: 226 VIYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRI------------------ 266
T+L + G + +A+ L E IL+ G KA +S H +
Sbjct: 671 TTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAE 730
Query: 267 ------------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
L P C + +E A L+ + G SY+A+ L +E
Sbjct: 731 NIALSRILLDDFFLSPLIRHLCKSKKALE-AHELVKKFESLGVSLKTGSYNALICGLVDE 789
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I + + EM+ G P Y L A+ K +++ L+V +E KG + T
Sbjct: 790 NLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG-YESTYVT 848
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y K MS+ G TYG L+DGL +DG+ +A + +E
Sbjct: 849 YNTIISGLVKSKMLYEAMDLYYKLMSE--GFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML P YN+L+ G G + + M+ Q PDI ++ L+ ++C
Sbjct: 907 MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALC 962
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 219/528 (41%), Gaps = 70/528 (13%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
P AL++FK ++ P H M+ ++ R+ +M +V D M+ + F
Sbjct: 92 PAEALQLFKSVAQQ-PRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES----KLEAAHIL-- 137
T R+ G L A + + V + ++N L+ +VK +E ++
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210
Query: 138 ---------------------------FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
LR VK + S + + VL Q R + A
Sbjct: 211 DGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEA 270
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------------ 212
+ Q+M+ +GC PD + +L++ LC+ R+++A + + M
Sbjct: 271 YKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDK 330
Query: 213 ------------FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
W + G +++V Y ++ ALC G++ +A + +++ +KG++ P
Sbjct: 331 CGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIE-P 389
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKV 318
+ + + + + A L N I G P+ +Y + I+ Y + G ++ K
Sbjct: 390 QQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTY-VLFINYYGKSGESLKAIKR 448
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+ M++KG P +V A L +L K G + A V E G P Y +++K
Sbjct: 449 YELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV-CPDNITYTMMIKCCS 507
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
A N+ A+ +M + CV + L+D L + GR EA ++ E+ + P
Sbjct: 508 KASNADEAMKVFSEMI-ETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN L+ GL GK E + LEEM S + P++ +++++ +C N
Sbjct: 567 CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKN 614
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 201/436 (46%), Gaps = 10/436 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-L 106
Y + + L + +R+TE + QMK + T + ++ + G +NEA+ K +
Sbjct: 639 YNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYI 697
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q SF++L++ ++K + +E + I F + + L+ L+ LC+ ++
Sbjct: 698 LQPGSKADRSSFHSLMEGILKRAGMEKS-IEFAENIALSRILLDDFFLSPLIRHLCKSKK 756
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + ++ + G SY+ L+ GL ++ ++ A L F + + G D
Sbjct: 757 ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL----FSEMKRLGCDPDEF 812
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L A+ +I+D +++ +++ KG ++ + I + + + A L +
Sbjct: 813 TYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTI-ISGLVKSKMLYEAMDLYYK 871
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P+ +Y + L +G+I + + + DEM G P+ +Y L G
Sbjct: 872 LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ E+ + MV P ++ Y +L+ LC AG ++ Y ++++ ++G + TY
Sbjct: 932 TEKVCELFQN-MVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLT-ELGLEPDLITY 989
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL R GR EA + +M P + TYN LI L GK EA EE++
Sbjct: 990 NLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLK 1049
Query: 467 QAKLPDISVWSSLVAS 482
P++ +++L+
Sbjct: 1050 NGWKPNVFTYNALIGG 1065
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 203/472 (43%), Gaps = 19/472 (4%)
Query: 12 TYLSQIIKKQKSPLT-ALKIFKEAKEKY-PNYRHNGPVYASMI--GILSESNRITEMKEV 67
T L ++K+ + LT A +IF + K+ P+Y + S + G+++E+ + +KE
Sbjct: 641 TALHGLVKEDR--LTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEA--LHTLKEY 696
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I Q + S F + + + + +++ +N++ + + L++ + K
Sbjct: 697 ILQ---PGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCK 753
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
K AH L ++ V + S N L+ L D+A +F EM GC PD
Sbjct: 754 SKKALEAHEL-VKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEF 812
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y++++ + R+ + + M KG V Y T++ L + +AM +
Sbjct: 813 TYNLILDAMGKSMRIEDMLKVQKEMHC----KGYESTYVTYNTIISGLVKSKMLYEAMDL 868
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
K++ +G + DG+ IE A+ L +E L G P+ A Y+ +
Sbjct: 869 YYKLMSEGFSPTPCTYGPLLDGLLKDGK-IEDAEDLFDEMLDYGCKPNRAIYNILLNGYR 927
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G + ++ M +G P + Y + AL G ++++L + + + P +
Sbjct: 928 LAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQ-LTELGLEPDL 986
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN+L+ GL +G AV M K G N TY L+ L ++G+ EA ++ E
Sbjct: 987 ITYNLLIHGLGRSGRLEEAVSLFNDMEKS-GIAPNLYTYNSLILYLGKEGKAAEAGKMYE 1045
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
E+L + P V TYN LI G G A +MI P+ S + L
Sbjct: 1046 ELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 161/358 (44%), Gaps = 13/358 (3%)
Query: 8 LLTPTYLSQIIK---KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
LL +LS +I+ K K L A ++ K+ + + + Y ++I L + N I
Sbjct: 738 LLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGS--YNALICGLVDENLIDVA 795
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ + +MK C+ + + + ++ ++ + + + K + + ++NT++
Sbjct: 796 EGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISG 855
Query: 125 MVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+VK L EA + + G+ + L+D L + + + A +F EM GC
Sbjct: 856 LVKSKMLYEAMDLYYKLMSEGFSPTP--CTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCK 913
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+R Y+IL+ G RL T + +F + +G DI Y L+ ALC G++ D
Sbjct: 914 PNRAIYNILLNGY----RLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLND 969
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++ ++ GL+ P + + + +E A SL N+ G P+L +Y+++
Sbjct: 970 SLSYFRQLTELGLE-PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLI 1028
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L EG+ E K+ +E+ G+ P++ Y A + G D A + +V G
Sbjct: 1029 LYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 30/357 (8%)
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+ A + LR G ++ + N ++D +C+ + + A ++ EM + +PD +Y+
Sbjct: 222 QRAPLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNA 281
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ G C +L +A L F +++ + D+ + L+ A C +G++++A L +
Sbjct: 282 LINGFCIVGKLKDAIGL----FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 337
Query: 252 LRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+++G+K + + C N+ + AKS+ N RG ++ SYS M
Sbjct: 338 MKQGIKPDVVTYNSLMDRYCLVNE---VNKAKSIFNTMSHRGVTANVRSYSIMINRFCKI 394
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
+ + K+ EM K +P+++ Y + + L K G + ALE+ +E +G
Sbjct: 395 KMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRG-------- 446
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
++ L + K G N TY IL+DGLC+ GR +A + E++
Sbjct: 447 -------------QQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDL 493
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L++ Y V TY V+I G C+ G EA+ L +M +P+ + ++ S+ N
Sbjct: 494 LVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDN 550
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 22/286 (7%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFL 139
+ + I + G+L +A+ LF ++ N +FN L+ KE ++ EA + L +
Sbjct: 277 NTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAM 336
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
G +K + + N LMD C + A +F M +G + SY I++ C
Sbjct: 337 MMKQG--IKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKI 394
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA- 258
+ +++A L F + K +++ Y +L+ LC G+I A+++ +++ +G +
Sbjct: 395 KMVDQAMKL----FKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPD 450
Query: 259 --------------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
P + I + G +E A+++ + L++G ++ +Y+ M
Sbjct: 451 IITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIH 510
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
N+G E +L +M+ P+ V YE + +LF + D+A
Sbjct: 511 GFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 9/332 (2%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N+LM L + A +VF EM +G S++ ++ G+C L+ A ++
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE----TLH 174
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCN 272
R+S+ G D+ Y L+ LC G+I+DA + EK+ +G+K P + I + C
Sbjct: 175 RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK-PNAVVFTILIDAHCK 233
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G D E L E RG P +Y+A+ L + ++ EMR+ G P V
Sbjct: 234 KG-DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K+ +D A+E+ + + +G + V Y L+ GL AG SA A L +
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV-TYTALISGLSKAGRSADAERVLGE 351
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + G + TY +++D CR G R+L+EM + P V TYNV++ G C +G
Sbjct: 352 M-MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ A M L MI+ PD ++ L+ C
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHC 442
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 154/357 (43%), Gaps = 43/357 (12%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ V D+M+ F T I RAG L+ A +L + +S+ ++ L++
Sbjct: 136 QNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQG 195
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + ++E A +F + C G +K +L+D C+ ++ L + +EM +G P
Sbjct: 196 LCRVGRIEDARGVFEKMC-GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRP 254
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y+ ++ GLC R L A+ ++ M G D V Y TL+ C + ++ A
Sbjct: 255 DAVTYNAIVNGLCRARDLKSASGIVVEM----RSAGLRPDTVTYTTLIDGYCKEEELDMA 310
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
M+I + ++ +G+ ++E +Y+A+
Sbjct: 311 MEIKQNMVAEGVG--------------------------LDE----------VTYTALIS 334
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L GR + ++VL EM G P Y + A + G V L +++E KG
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR-K 393
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V YN+++ G C G A M L M +G + TY IL+DG C+ G+ +
Sbjct: 394 PGVVTYNVIMNGFCKLGQMKNADMLLNAMI-NIGVSPDDITYNILLDGHCKHGKVTD 449
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 180/391 (46%), Gaps = 21/391 (5%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA + + L + FN L++++V+ +L +A +F V+ + S N +
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVF-DEMQSRGVRRTVVSFNTM 157
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ +C+ D A + + M G PD +Y L++GLC R+ +A +F ++
Sbjct: 158 ISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDA----RGVFEKMC 213
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+G + V++ L+ A C +G + +++ ++ +G++ + I C D+
Sbjct: 214 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR-ARDL 272
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A ++ E G P +Y+ + ID Y E + ++ M +G V Y A
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTL-IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 331
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM--- 393
++ L K G +A V+ E M G P Y +++ C G+ + LK+M
Sbjct: 332 LISGLSKAGRSADAERVLGEMMEAG-LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 390
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G V TY ++++G C+ G+ A +L M+ P TYN+L+ G C GK
Sbjct: 391 GRKPGVV----TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK 446
Query: 454 QYEAVMWLEEMIS-QAKLPDISVWSSLVASV 483
V +EE+ S + +PD+ V++S+V +
Sbjct: 447 ----VTDIEELKSAKGTVPDLGVYTSIVGEI 473
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + + +L+ L R G A V +EM R V ++N +I G+C G A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
M PD+ + +L+ +C
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLC 197
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 179/410 (43%), Gaps = 8/410 (1%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C F T I + + G + EA LF L + +NTL+ VK +++ A
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 180
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
++L+ + + N+L+ + R + + +++ G PDR + I +
Sbjct: 181 NMLY-EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVS 239
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC RL+EA L M +KG I+ + +++ A G A + + ++
Sbjct: 240 GLCWAGRLDEAMEFLMDML----EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 295
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
GL S + + +G ++ A LI + + +G + +++ + + G +V
Sbjct: 296 GLTPSPSTCSSLLMGLSINGR-LQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ EM +G +P +V + A + L K G+V+EA V E + KG +P YN L+
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG-LIPNNFAYNSLI 413
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C G A + L+K+ + G + + T +++ GLC+ GR A V +M
Sbjct: 414 CGFCKCGKLNEA-LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 472
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYN LI G C A + M + PD++ ++ + C
Sbjct: 473 SPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 202/464 (43%), Gaps = 26/464 (5%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNR---ITEMKEVIDQMKGDSCECKDSVFAT 85
K+FK+ + P P + GI+ R I + ++ M CE +
Sbjct: 42 KLFKDVIRRGPQ-----PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNI 96
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCY 143
I G+ ++A++ F + + C +FNT++ KE + A LF L+
Sbjct: 97 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKE-M 155
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+ + + N LM+ + R D A +++EM +G PD +++IL+ G R
Sbjct: 156 GFSPNAIMY--NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 213
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
+ LL IS G D ++ + LC G++ +AM+ L +L KGL
Sbjct: 214 DGDRLLKD----ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAF 269
Query: 264 HRIDLCPCNDG-ED--IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + G ED E K +++ L PS ++ S++ + L GR+ E +++
Sbjct: 270 NSVIAAYSQAGLEDKAFEAYKLMVHFGLT----PSPSTCSSLLMGLSINGRLQEATELIG 325
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M KG + + + L FK G V A + E +G F P V ++ + GL
Sbjct: 326 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF-PDVVAFSAFIDGLSKQ 384
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A +M ++ G + N Y L+ G C+ G+ EA ++ + M R P + T
Sbjct: 385 GLVEEAYNVFLEMLRK-GLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFT 443
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N++I GLC G+ A+ +M PDI +++L+ C
Sbjct: 444 TNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 7/317 (2%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL + M G P IL K L R+ + ++ + +F + ++G +
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLL---RVGDYGNV-WKLFKDVIRRGPQPCKYTFS 60
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
++ C +G I +L ++ K P + + I + C A + N +
Sbjct: 61 GIILGFCRKGCIHLGESLLH-LMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIE 119
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG P++ +++ + EG +VE K+ D ++ GF P+ +MY + K +D+
Sbjct: 120 RGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQ 179
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A ++ EEM K P +NIL+ G G LK +S +G + + + I
Sbjct: 180 A-NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS-VLGLLPDRSLFDIS 237
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
V GLC GR EA L +ML + P + +N +I G + +A + M+
Sbjct: 238 VSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGL 297
Query: 470 LPDISVWSSLVASVCCN 486
P S SSL+ + N
Sbjct: 298 TPSPSTCSSLLMGLSIN 314
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 16/238 (6%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR--- 150
G+L EA L + + +F LL + K + A +S +G E++ R
Sbjct: 315 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA-----QSLWG-EMERRGIF 368
Query: 151 --IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + + +D L + + A +VF EM +G P+ +Y+ L+ G C +LNEA L
Sbjct: 369 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 428
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
M +G DI ++ LC QG+++ A+ + + + GL +P + +
Sbjct: 429 EKVM----RHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL-SPDIITYNTLI 483
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
D+ A +L+N G P L +Y+ + R+ +LDE+ + G
Sbjct: 484 NGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 193/434 (44%), Gaps = 49/434 (11%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ + P+ AL +F E ++ ++ + P YA+++ L+ ++EV+ ++ +
Sbjct: 38 VKEARDPVEALTLFHEYLQR--GFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVH 95
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++++F + Y +A +++AV LF +++FNCV +QS N+LL +V A+ L
Sbjct: 96 CQETIFIALFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANEL 155
Query: 138 FLRSCYGWEVKSRIQS--LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
F + G+E+ R+ S N+++ + + A VF EM + P +Y+ L+
Sbjct: 156 FDK---GYEMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGY 212
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + L++A LL M +KG + + + L+ C G+ +A
Sbjct: 213 LCRNGELDKAKGLLEDMI----KKGKRPNAITFALLMEGSCLIGEHNEA----------- 257
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
K ++ + RG P++ ++ + DL G+I E
Sbjct: 258 -------------------------KKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEA 292
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
VL EM+ + P +V Y + L K+G +A EV+ E V G Y +L+
Sbjct: 293 KSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGC-EANAATYRMLVD 351
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G+ + L M G ET+ LV GL + G A VLEEM R
Sbjct: 352 GFCRVGDFEGGLKVLNAMLTS-GHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMM 410
Query: 436 PCVETYNVLIRGLC 449
C + + L+ C
Sbjct: 411 FCADDWEALVMESC 424
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 154/319 (48%), Gaps = 15/319 (4%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL---YSMFWRISQKGSGEDIV 226
A+ +F M C +S + L+ L ++ EA L Y M +R++ V
Sbjct: 117 AVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNS-------V 169
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ ++ ++G+ + A ++ +++L + ++ + + C +GE ++ AK L+ +
Sbjct: 170 AFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGE-LDKAKGLLED 228
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G P+ +++ + G E K++ +M +G P++V + ++ L K G
Sbjct: 229 MIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGK 288
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG-CVANGET 405
+DEA V+ E M K P V YNIL+ LC G +A A L +M QVG C AN T
Sbjct: 289 IDEAKSVLHE-MKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEM--QVGGCEANAAT 345
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y +LVDG CR G F +VL ML ++P VET+ L+ GL G A LEEM
Sbjct: 346 YRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEME 405
Query: 466 SQAKLPDISVWSSLVASVC 484
+ + W +LV C
Sbjct: 406 KRQMMFCADDWEALVMESC 424
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEA---KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
VE + E +GF P Y A KLA G V+E L +E++ V +
Sbjct: 45 VEALTLFHEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQET----I 100
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ L + A AV +M++ CV ++ L++ L +G FLEA+ + ++
Sbjct: 101 FIALFQHYGKAQLVHKAVELFNRMTR-FNCVRTSQSLNSLLNVLVDNGWFLEANELFDKG 159
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ +NV+I+G G+ +A +EM+ + P + ++SL+ +C N +
Sbjct: 160 YEMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRN-GE 218
Query: 490 LNVCRKTLEQL 500
L+ + LE +
Sbjct: 219 LDKAKGLLEDM 229
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 206/438 (47%), Gaps = 20/438 (4%)
Query: 55 LSESNRITE-MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF---N 110
L ++ R+ E M ++ +M C + T ++ + + EA+ L ++ +
Sbjct: 140 LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS 199
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C S+NT++ E +++ A+ LFL + + + +++D LC+ + D A
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFL-DMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
VFQ+M +G P+ +Y L+ G + + E +L M S G D Y
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM----SAHGLEPDCFTYGL 314
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN---EA 287
LL LC +GK +A ++ + ++RKG+K P + I L G +GA S ++ +
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRKGIK-PDVSIYGIIL----HGYATKGALSEMHSFLDL 369
Query: 288 LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
++ GI P+ ++ + + I E + ++MR +G P++V Y + AL K G
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VD+A E+ +M+ P + V+ L+ GLC A +M Q G N +
Sbjct: 430 VDDA-ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ-GIHPNVVFF 487
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ LC +GR ++A R+++ M P + +YN LIRG C +GK EA L+ M+S
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547
Query: 467 QAKLPDISVWSSLVASVC 484
P+ +++L+ C
Sbjct: 548 VGLKPNECTYNTLLHGYC 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 187/435 (42%), Gaps = 8/435 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ + ++EM +D M G+ +F +A+ + EA+ +F +
Sbjct: 346 IYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKM 405
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q ++ TL+ + K +++ A + F V I L+ LC +
Sbjct: 406 RQQGLSPNVVNYATLIDALCKLGRVDDAELKF-NQMINEGVAPNIVVFTSLVYGLCTIDK 464
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F EM QG +P+ ++ +M LC + R+ +A L+ M + G+ DI+
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM----ERVGTRPDII 520
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C GK +A ++L+ +L GLK + + + C DG I+ A S+ E
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR-IDDAYSVFQE 579
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P + +Y+ + L+ R E ++ M T G S+ Y L L K+
Sbjct: 580 MLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNC 639
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
VDEAL++ + K V + +NI++ L G A+ +S G V + TY
Sbjct: 640 VDEALKMFQSLCSKDLQVDII-TFNIMIGALLKDGRKEDAMNLFATISAN-GLVPDVTTY 697
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ + L +G E + EM P N L+R L G A +L ++
Sbjct: 698 RLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDE 757
Query: 467 QAKLPDISVWSSLVA 481
+ + S S L++
Sbjct: 758 KNFSLEASTTSMLIS 772
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 159/353 (45%), Gaps = 8/353 (2%)
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHI 191
AA L L++ GW V + LL LC +R A+ V + M GC P+ SY+
Sbjct: 115 AAFGLILKT--GWRVNDVVVVNRLLKG-LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNT 171
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+KG C++ R EA LL+ M + ++V Y T++ +G++ A + +
Sbjct: 172 LLKGFCDENRAEEALELLH-MMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDM 230
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+G+ P + I + + ++ A+ + + + +G P++ +Y+ + + G+
Sbjct: 231 TDQGI-PPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQ 289
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
E ++L EM G P Y L L K G EA ++ + M++ P V +Y
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF-DSMIRKGIKPDVSIYG 348
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
I+L G G + +L M G N + I+ + EA + +M
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGN-GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQ 407
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ P V Y LI LC +G+ +A + +MI++ P+I V++SLV +C
Sbjct: 408 QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 194/485 (40%), Gaps = 53/485 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGD---SCECKDSVFATAIRTYARAGQLNEAVSLFK 104
Y +++ + NR E E++ M SC + T I + GQ+++A +LF
Sbjct: 169 YNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL 228
Query: 105 NLSQ----FNCVNWTQSFNTLLKEMVKESK------------------------------ 130
+++ N V +T + L K V +
Sbjct: 229 DMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG 288
Query: 131 --LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
E +L S +G E + LL+D LC+ + A +F M +G PD
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCF--TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSI 346
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y I++ G L+E ++S + G + I+ + A + I +AM I
Sbjct: 347 YGIILHGYATKGALSE----MHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
K+ ++GL + C G ++ A+ N+ + G P++ ++++ L
Sbjct: 403 NKMRQQGLSPNVVNYATLIDALCKLGR-VDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + ++ EM +G P++V + + L +G V +A +I+ GT P +
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT-RPDII 520
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L++G C G + A L M VG N TY L+ G CRDGR +A V +E
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIM-LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQE 579
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
ML P V TYN ++ GL + EA MI+ K WS ++ N
Sbjct: 580 MLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK-----QWSIYTYNIILNGL 634
Query: 489 DLNVC 493
N C
Sbjct: 635 SKNNC 639
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 6/258 (2%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI-EGAKS 282
D+ Y L+ C G+++ IL+ G + L D + + E
Sbjct: 93 DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGV 152
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM---RTKGFWPSLVMYEAKLA 339
L+ G P++ SY+ + +E R E ++L M + + P+LV Y +
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
F +G VD+A + + M P V Y I++ GLC A A ++M + G
Sbjct: 213 GFFTEGQVDKAYNLFLD-MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK-GV 270
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY L+ G G++ E R+L+EM P TY +L+ LC GK EA
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 460 WLEEMISQAKLPDISVWS 477
+ MI + PD+S++
Sbjct: 331 LFDSMIRKGIKPDVSIYG 348
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 193/467 (41%), Gaps = 80/467 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ + P AL +F + +E +RH+ P Y+S+I L++S + +++ ++ +
Sbjct: 56 LKEIEDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR 113
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++S+F I+ Y +AG +++A+ +F ++ F+CV
Sbjct: 114 CRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVR------------------------ 149
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
IQSLN L++VL + A F P+ S++IL+KG
Sbjct: 150 ------------TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ A + M Q +V Y +L+ LC + A +LE +++K ++
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPS----VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR 253
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P+ ++ + L +G E K
Sbjct: 254 ------------------------------------PNAVTFGLLMKGLCCKGEYNEAKK 277
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P LV Y ++ L K G +DEA +++ EM K P V +YNIL+ L
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA-KLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A L +M + GC N TY +++DG CR F VL ML + P
Sbjct: 337 CTECRVPEAYRVLTEMQMK-GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ ++ GL G A LE M + W +L++ +C
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
ED E A SL ++ G SYS++ L D++L +R + ++
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ K G VD+A++V + + V T++ N L+ L D G A + +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHK-ITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K + N ++ IL+ G + A +V +EML P V TYN LI LC
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+A LE+MI + P+ + L+ +CC
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D A + M+ +G Y++LM GLC + R+ EA + M G
Sbjct: 209 CESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV----NIGV 264
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V YRTL++ C +++ A++I ++R G P + E +E A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF-VPSEANCSFMIDELRKKELVEEAF 323
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL + G +P++ +Y+A+ L R + D++ EM +G P+ V Y + AL
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383
Query: 342 FKDGMVDEALEVIEE----------------------------------EMVKGTFVPTV 367
K GM+++AL + ++ MVK PT
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC G+ + + M L + + G N T+ L++G C+D + EA+R+ +
Sbjct: 444 ASYSPLIAGLCRNGDLS-SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M+ + P T+NV+I G C +G +A ++M+ PD + SL++ +C +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 488 A 488
Sbjct: 563 G 563
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 201/481 (41%), Gaps = 49/481 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ R + + +M G E + +A I + G + +A+ LF +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+N+L+ K+ L+ A L L + S + L+ LC R
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGL-LSGMVKEGLTPTAASYSPLIAGLC--RNG 457
Query: 168 DLA--LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
DL+ + + +EM +G + ++ L+ G C D++++EA L F ++ +
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL----FDKMIDSNVIPNE 513
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + ++ C G I+ A Q+ ++++ GLK P + +R + + A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK-PDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM----------------------- 322
+ + + S +A+ + EGR E + DEM
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632
Query: 323 ------------RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +G P + Y + AL K+ + +AL ++ +V G + P +
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG-YSPNTVTH 691
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ LC +G A + K+M + N TY +D +G +E ++ L +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAG-NVLPNKFTYNCFLDYFATEGD-MEKAKDLHSAM 749
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
++ + + ++N+LI+GLC GK EA+ + ++ PD +S+++ + C D+
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL-CKMGDI 808
Query: 491 N 491
N
Sbjct: 809 N 809
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 196/491 (39%), Gaps = 82/491 (16%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ D+M + V+ IR Y + L+ A L + +N L+
Sbjct: 183 RDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG 242
Query: 125 MVKESKLEAA---------------HILFLRSCYGWEVKSRIQSLNLLMDV--------- 160
+ K +++ A + + YG+ R++ L + + +
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF---CRMEELEMALRITHDMIRLGF 299
Query: 161 ----------LCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + R+ +L F ++ G P+ +Y+ L+ LC + R ++A
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L F ++ +G + V Y L+ ALC +G I+DA+ + +K+ KG+K + +
Sbjct: 360 L----FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G ++ A+ L++ + G P+ ASYS + L G + ++ EM +G
Sbjct: 416 NGYCKQGS-LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ + A + KD +DEA + ++M+ +P +N++++G C GN A
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLF-DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLC--------------------------------- 414
+M ++G + TY L+ GLC
Sbjct: 534 QLYDQMV-EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592
Query: 415 --RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R+GRF E + +EM +R + ++ +++ + ++ + EM Q PD
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 473 ISVWSSLVASV 483
++ ++ ++
Sbjct: 653 DIFYTCMIDAL 663
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 199/487 (40%), Gaps = 35/487 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK------YPNYRHNGPVYASMIGILSESN 59
P +T L + K+ AL +F + ++K YP Y S+I +
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP--------YNSLINGYCKQG 422
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ + ++ M + + ++ I R G L+ + L + +++ +F
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 482
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+ K+ K++ A LF + + + + + N++++ C A ++ +M
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVE 541
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLL------YSMFWRISQKGSGEDIVIYRTLLF 233
G PD +Y L+ GLC +++A + Y++ S LL+
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA----------LLY 591
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
+G+ + + +++ +G+K I + D E + L E +G
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVS-FTIIVYAALKQHDKEKSCVLFREMKEQGVK 650
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P Y+ M L E +++ D+M G+ P+ V + + L K G + A E+
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA-EL 709
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ +EM+ G +P YN L G+ A M + G +A+ ++ IL+ GL
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVSFNILIKGL 767
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G+ EA ++ ++ + P +Y+ +I LC +G +A EM+ + PD+
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV 827
Query: 474 SVWSSLV 480
++ +
Sbjct: 828 VAYNIFI 834
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 142/341 (41%), Gaps = 43/341 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L + R+ LA +F +M G + D Y ++ C R L+ A L+ R+ +G
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVV----RMESEG 228
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y L++ LC ++Q+A+++ ++ G+ A + + C E++E A
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR-MEELEMA 287
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ ++ + G +PS A+ S M +DE+R K KL
Sbjct: 288 LRITHDMIRLGFVPSEANCSFM----------------IDELRKKELVEEAFSLACKLGD 331
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L GMV P V YN L+ LC A K+M+ + G
Sbjct: 332 L---GMV-----------------PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLE 370
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LC+ G +A + ++M + V YN LI G C G A
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
L M+ + P + +S L+A +C N DL+ C + +++
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRN-GDLSSCMELHREMA 470
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 184/393 (46%), Gaps = 14/393 (3%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRIQS 153
++A++LF+ + + + F+ + + + L L C E + I +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN----LVLDFCKQLELNGIAHNIYT 125
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN++++ C+C ++ A V ++ G PD +++ L+KGL + +++EA L+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV---- 181
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ + G D+V Y +++ +C G A+ +L K+ + +KA I C D
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G I+ A SL E +G S+ +Y+++ L G+ +G +L +M ++ P+++
Sbjct: 242 GC-IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ L K+G + EA E+ +E + +G P + YN L+ G C + A L M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ C + T+ L+ G C R + +V + R TY++L++G C GK
Sbjct: 360 VRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A +EM+S LPD+ + L+ +C N
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 201/430 (46%), Gaps = 23/430 (5%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T I+ G+++EAV L + + C ++N+++ + + A L LR
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL-LR 217
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
VK+ + + + ++D LC+ D A+ +F+EM+ +G +Y+ L++GLC
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+ N+ LL M R +++ + LL +GK+Q+A ++ ++++ +G+ +P
Sbjct: 278 KWNDGALLLKDMVSR----EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPN 332
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + DG ++ S N L +R P + +++++ R+ +G
Sbjct: 333 IITYNTLM----DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
KV + +G + V Y + + G + A E+ +E MV +P V Y ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGILLDG 447
Query: 377 LCDAGNSAVAVMYLKKMSKQ---VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
LCD G A+ + + K +G V Y +++G+C+ G+ +A + + +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
P V TY V+I GLC G EA + L +M P+ +++L+ + DL
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTAS 562
Query: 494 RKTLEQLSSC 503
K +E++ SC
Sbjct: 563 AKLIEEMKSC 572
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE-------------CKDS------ 81
Y + + ++I L +++E ++D+M + C+ C+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 82 ----------------VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++T I + R G ++ A+SLFK + + ++N+L++ +
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K +L L+ E+ + + N+L+DV + + A +++EM +G P+
Sbjct: 274 CKAGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ D M
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ I ++GL A + C G+ I+ A+ L E + G +P + +Y +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 506
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 426 LEEM 429
+EEM
Sbjct: 566 IEEM 569
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D A + M+ +G Y++LM GLC + R+ EA + M G
Sbjct: 232 CESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV----NIGV 287
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V YRTL++ C +++ A++I ++R G P + E +E A
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF-VPSEANCSFMIDELRKKELVEEAF 346
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL + G +P++ +Y+A+ L R + D++ EM +G P+ V Y + AL
Sbjct: 347 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 406
Query: 342 FKDGMVDEALEVIEE----------------------------------EMVKGTFVPTV 367
K GM+++AL + ++ MVK PT
Sbjct: 407 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 466
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC G+ + + M L + + G N T+ L++G C+D + EA+R+ +
Sbjct: 467 ASYSPLIAGLCRNGDLS-SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 525
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M+ + P T+NV+I G C +G +A ++M+ PD + SL++ +C +
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585
Query: 488 A 488
Sbjct: 586 G 586
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 201/481 (41%), Gaps = 49/481 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ R + + +M G E + +A I + G + +A+ LF +
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+N+L+ K+ L+ A L L + S + L+ LC R
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGL-LSGMVKEGLTPTAASYSPLIAGLC--RNG 480
Query: 168 DLA--LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
DL+ + + +EM +G + ++ L+ G C D++++EA L F ++ +
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL----FDKMIDSNVIPNE 536
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + ++ C G I+ A Q+ ++++ GLK P + +R + + A +
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK-PDNYTYRSLISGLCLTSGVSKANEFVA 595
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM----------------------- 322
+ + + S +A+ + EGR E + DEM
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655
Query: 323 ------------RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +G P + Y + AL K+ + +AL ++ +V G + P +
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG-YSPNTVTH 714
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ LC +G A + K+M + N TY +D +G +E ++ L +
Sbjct: 715 TVLINNLCKSGYLGSAELLCKEMLAG-NVLPNKFTYNCFLDYFATEGD-MEKAKDLHSAM 772
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
++ + + ++N+LI+GLC GK EA+ + ++ PD +S+++ + C D+
Sbjct: 773 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL-CKMGDI 831
Query: 491 N 491
N
Sbjct: 832 N 832
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 196/491 (39%), Gaps = 82/491 (16%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ D+M + V+ IR Y + L+ A L + +N L+
Sbjct: 206 RDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG 265
Query: 125 MVKESKLEAA---------------HILFLRSCYGWEVKSRIQSLNLLMDV--------- 160
+ K +++ A + + YG+ R++ L + + +
Sbjct: 266 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF---CRMEELEMALRITHDMIRLGF 322
Query: 161 ----------LCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + R+ +L F ++ G P+ +Y+ L+ LC + R ++A
Sbjct: 323 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L F ++ +G + V Y L+ ALC +G I+DA+ + +K+ KG+K + +
Sbjct: 383 L----FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G ++ A+ L++ + G P+ ASYS + L G + ++ EM +G
Sbjct: 439 NGYCKQGS-LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 497
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ + A + KD +DEA + ++M+ +P +N++++G C GN A
Sbjct: 498 AWNNYTFTALINGFCKDKKMDEAARLF-DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 556
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLC--------------------------------- 414
+M ++G + TY L+ GLC
Sbjct: 557 QLYDQMV-EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 615
Query: 415 --RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R+GRF E + +EM +R + ++ +++ + ++ + EM Q PD
Sbjct: 616 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 675
Query: 473 ISVWSSLVASV 483
++ ++ ++
Sbjct: 676 DIFYTCMIDAL 686
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 199/487 (40%), Gaps = 35/487 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK------YPNYRHNGPVYASMIGILSESN 59
P +T L + K+ AL +F + ++K YP Y S+I +
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP--------YNSLINGYCKQG 445
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ + ++ M + + ++ I R G L+ + L + +++ +F
Sbjct: 446 SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFT 505
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+ K+ K++ A LF + + + + + N++++ C A ++ +M
Sbjct: 506 ALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVE 564
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLL------YSMFWRISQKGSGEDIVIYRTLLF 233
G PD +Y L+ GLC +++A + Y++ S LL+
Sbjct: 565 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS----------LTALLY 614
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
+G+ + + +++ +G+K I + D E + L E +G
Sbjct: 615 GFFREGRFTETYHLWDEMAVRGVKL-DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 673
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P Y+ M L E +++ D+M G+ P+ V + + L K G + A E+
Sbjct: 674 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA-EL 732
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ +EM+ G +P YN L G+ A M + G +A+ ++ IL+ GL
Sbjct: 733 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLASIVSFNILIKGL 790
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G+ EA ++ ++ + P +Y+ +I LC +G +A EM+ + PD+
Sbjct: 791 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV 850
Query: 474 SVWSSLV 480
++ +
Sbjct: 851 VAYNIFI 857
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 142/341 (41%), Gaps = 43/341 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L + R+ LA +F +M G + D Y ++ C R L+ A L+ R+ +G
Sbjct: 196 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVV----RMESEG 251
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y L++ LC ++Q+A+++ ++ G+ A + + C E++E A
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR-MEELEMA 310
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ ++ + G +PS A+ S M +DE+R K KL
Sbjct: 311 LRITHDMIRLGFVPSEANCSFM----------------IDELRKKELVEEAFSLACKLGD 354
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L GMV P V YN L+ LC A K+M+ + G
Sbjct: 355 L---GMV-----------------PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLE 393
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LC+ G +A + ++M + V YN LI G C G A
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
L M+ + P + +S L+A +C N DL+ C + +++
Sbjct: 454 LSGMVKEGLTPTAASYSPLIAGLCRN-GDLSSCMELHREMA 493
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 184/393 (46%), Gaps = 14/393 (3%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRIQS 153
++A++LF+ + + + F+ + + + L L C E + I +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN----LVLDFCKQLELNGIAHNIYT 125
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN++++ C+C ++ A V ++ G PD +++ L+KGL + +++EA L+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD--- 182
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ + G D+V Y +++ +C G A+ +L K+ + +KA I C D
Sbjct: 183 -RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G I+ A SL E +G S+ +Y+++ L G+ +G +L +M ++ P+++
Sbjct: 242 GC-IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ L K+G + EA E+ +E + +G P + YN L+ G C + A L M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ C + T+ L+ G C R + +V + R TY++L++G C GK
Sbjct: 360 VRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A +EM+S LPD+ + L+ +C N
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 202/434 (46%), Gaps = 23/434 (5%)
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
E + F T I+ G+++EAV L + + C ++N+++ + + A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L LR VK+ + + + ++D LC+ D A+ +F+EM+ +G +Y+ L++GL
Sbjct: 215 L-LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + N+ LL M R +++ + LL +GK+Q+A ++ ++++ +G+
Sbjct: 274 CKAGKWNDGALLLKDMVSR----EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI-PSLASYSAMAIDLYNEGRI 312
+P + + DG ++ S N L +R P + +++++ R+
Sbjct: 330 -SPNIITYNTLM----DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+G KV + +G + V Y + + G + A E+ +E MV +P V Y I
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGI 443
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQ---VGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
LL GLCD G A+ + + K +G V Y +++G+C+ G+ +A + +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ P V TY V+I GLC G EA + L +M P+ +++L+ + D
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH-LRDGD 558
Query: 490 LNVCRKTLEQLSSC 503
L K +E++ SC
Sbjct: 559 LTASAKLIEEMKSC 572
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE-------------CKDS------ 81
Y + + ++I L +++E ++D+M + C+ C+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 82 ----------------VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++T I + R G ++ A+SLFK + + ++N+L++ +
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K +L L+ E+ + + N+L+DV + + A +++EM +G P+
Sbjct: 274 CKAGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ D M
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ I ++GL A + C G+ I+ A+ L E + G +P + +Y +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 506
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 426 LEEM 429
+EEM
Sbjct: 566 IEEM 569
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 9/332 (2%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N+LM L + A +VF EM +G S++ ++ G+C L+ A ++
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE----TLH 298
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCN 272
R+S+ G D+ Y L+ LC G+I+DA + EK+ +G+K P + I + C
Sbjct: 299 RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK-PNAVVFTILIDAHCK 357
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G D E L E RG P +Y+A+ L + ++ EMR+ G P V
Sbjct: 358 KG-DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K+ +D A+E+ + + +G + V Y L+ GL AG SA A L +
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV-TYTALISGLSKAGRSADAERVLGE 475
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + G + TY +++D CR G R+L+EM + P V TYNV++ G C +G
Sbjct: 476 M-MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ A M L MI+ PD ++ L+ C
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHC 566
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 43/361 (11%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ + V D+M+ F T I RAG L+ A +L + +S+ ++
Sbjct: 256 LASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGA 315
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L++ + + ++E A +F + C G +K +L+D C+ ++ L + +EM +
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMC-GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRER 374
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G PD +Y+ ++ GLC R L A+ ++ M G D V Y TL+ C + +
Sbjct: 375 GVRPDAVTYNAIVNGLCRARDLKSASGIVVEM----RSAGLRPDTVTYTTLIDGYCKEEE 430
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ AM+I + ++ +G+ ++E +Y+
Sbjct: 431 LDMAMEIKQNMVAEGVG--------------------------LDE----------VTYT 454
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
A+ L GR + ++VL EM G P Y + A + G V L +++E K
Sbjct: 455 ALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 514
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P V YN+++ G C G A M L M +G + TY IL+DG C+ G+
Sbjct: 515 GR-KPGVVTYNVIMNGFCKLGQMKNADMLLNAMI-NIGVSPDDITYNILLDGHCKHGKVT 572
Query: 421 E 421
+
Sbjct: 573 D 573
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 180/391 (46%), Gaps = 21/391 (5%)
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA + + L + FN L++++V+ +L +A +F V+ + S N +
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVF-DEMQSRGVRRTVVSFNTM 281
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ +C+ D A + + M G PD +Y L++GLC R+ +A +F ++
Sbjct: 282 ISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDA----RGVFEKMC 337
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+G + V++ L+ A C +G + +++ ++ +G++ + I C D+
Sbjct: 338 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR-ARDL 396
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A ++ E G P +Y+ + ID Y E + ++ M +G V Y A
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTL-IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM--- 393
++ L K G +A V+ E M G P Y +++ C G+ + LK+M
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAG-LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 514
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++ G V TY ++++G C+ G+ A +L M+ P TYN+L+ G C GK
Sbjct: 515 GRKPGVV----TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK 570
Query: 454 QYEAVMWLEEMIS-QAKLPDISVWSSLVASV 483
V +EE+ S + +PD+ V++S+V +
Sbjct: 571 ----VTDIEELKSAKGTVPDLGVYTSIVGEI 597
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + + +L+ L R G A V +EM R V ++N +I G+C G A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
M PD+ + +L+ +C
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLC 321
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 195/456 (42%), Gaps = 51/456 (11%)
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M + C F T I + G + EA +LF + + + +NTL+ VK
Sbjct: 210 MIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARD 269
Query: 131 LEAAHILFLRSCYGWEVKSRI-----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ A++L+ E+KS+ + N+L+ + R + + +++ G
Sbjct: 270 IGQANMLY------EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSI 323
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+I + GLC L+EA L M +KG +V + +++ A G + A
Sbjct: 324 SSLYNICVSGLCWAGWLDEAMKFLEDML----EKGITPTVVAFNSIIAAYSRAGLEEKAY 379
Query: 246 QILEKILRKGL---------------KAPKSRRHR-------IDLCPCN--------DG- 274
+ +++ GL K + + R ++ P N DG
Sbjct: 380 KAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGY 439
Query: 275 ---EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D+ GA SL NE RG P ++SA L G + E V +M KGF P+
Sbjct: 440 FRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNN 499
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
+Y + + G + EAL ++E EM + +P + NI++ GLC G A +
Sbjct: 500 FVYNSLIRGFCNSGRLQEAL-MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFR 558
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M G + + TY L+DG C+ + V+ +M + P + TYN+ + GLC+
Sbjct: 559 NM-HHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTG 617
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
K AVM LEE+IS +PD +++++ VC +
Sbjct: 618 RKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDV 653
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 170/384 (44%), Gaps = 48/384 (12%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRS 141
F + I Y+RAG +A ++ + +F + + ++L+ + K +L EA +L+
Sbjct: 362 FNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMI 421
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + LL+D + A ++ EM+ +G +PD ++ + GL
Sbjct: 422 VEGLPINK--AAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGL 479
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA Y +F ++S+KG + +Y +L+ C+ G++Q+A+ + ++ RKGL
Sbjct: 480 VDEA----YDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGL----- 530
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+P + + + + L EGR+ V
Sbjct: 531 -------------------------------LPDIFTTNIIINGLCKEGRMKSASDVFRN 559
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P +V Y + K EV+ + G + P + YNI L GLC
Sbjct: 560 MHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATG-WDPDITTYNIRLHGLCTGR 618
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR-SYWPCVET 440
+ AVM L+++ G V + TY +++G+C D LE + ++ L++ ++ P V T
Sbjct: 619 KMSRAVMMLEELI-SAGVVPDTVTYNTVMNGVCTD--VLERAMIVTAKLLKMAFVPNVVT 675
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEM 464
N+L+ C G + +MW +++
Sbjct: 676 ANLLLSHFCKQGMPEKTIMWGQKL 699
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V YNIL+ C G + A+ +++ M GC + T+G +++ C G +EA
Sbjct: 182 PDVYAYNILINAYCTRGQTFDALGWMRFMIDN-GCTPSLVTFGTVINAFCNQGNMMEARN 240
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ + M + P V YN L+ G +A M EEM S+A PD + ++ LVA
Sbjct: 241 LFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAG 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 125/330 (37%), Gaps = 44/330 (13%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ +L +L + + + M QG P +++ ++ G C + LL
Sbjct: 115 SAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCV 174
Query: 212 MFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M QK + D+ Y L+ A C +G+ DA+ + R ID
Sbjct: 175 M-----QKFKCQPDVYAYNILINAYCTRGQTFDALGWM--------------RFMID--- 212
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G PSL ++ + N+G ++E + D M+ G P+
Sbjct: 213 -------------------NGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPN 253
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + K + +A ++ EEM P +NIL+ G G L
Sbjct: 254 VVCYNTLMNGYVKARDIGQA-NMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLL 312
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ +S+ ++ Y I V GLC G EA + LE+ML + P V +N +I
Sbjct: 313 RDLSQSG-SLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSR 371
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G + +A M+ P SSL+
Sbjct: 372 AGLEEKAYKAYRMMVKFGLFPSSLTCSSLI 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EALE++ M + P+ IL K L G+ L+ M Q G +
Sbjct: 97 EALEIVGR-MREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQ-GPRPCNRNFNA 154
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++ G CR G +L M P V YN+LI C+ G+ ++A+ W+ MI
Sbjct: 155 VILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNG 214
Query: 469 KLPDISVWSSLVASVC 484
P + + +++ + C
Sbjct: 215 CTPSLVTFGTVINAFC 230
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 207/475 (43%), Gaps = 10/475 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + K K A + KE EK + N VY ++I L E+ + +
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEK--GFPPNVIVYNNLIDSLIEAGSLNKAI 377
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ D M S + T I+ Y ++GQ + A L K + SF +++ +
Sbjct: 378 EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLL 437
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++A + F+ + L L+ LC+ + A+ ++ + +G D
Sbjct: 438 CSHHMFDSA-LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVD 496
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++ + L+ GLC +L E + + R G D V Y TL+ C K+ +A
Sbjct: 497 TKTSNALLHGLCEAGKLEEGFRIQKEILGR----GFVMDRVSYNTLISGCCGNKKLDEAF 552
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++++++KGLK P + + I + + +E A + G IP + +YS M
Sbjct: 553 MFMDEMVKKGLK-PDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG 611
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
R EG K+ DEM + P+ V+Y + A + G + ALE+ E+ KG P
Sbjct: 612 CCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG-ISP 670
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
Y L+KG+ A + L++M + G N Y L+DG + G+ ++ +
Sbjct: 671 NSATYTSLIKGMSIISRVEEAKLLLEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECL 729
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
L EM ++ P TY V+I G G EA L EM + +PD + +
Sbjct: 730 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 46/422 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F TAI + + G++ EA+ LF SK+E A ++
Sbjct: 254 LFTTAINAFCKGGKVEEAIELF-------------------------SKMEEAGVV---- 284
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N ++D L R D A ++M +G P +Y IL+KGL +R
Sbjct: 285 -------PNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A Y + +++KG ++++Y L+ +L + G + A++I + ++ KGL S
Sbjct: 338 IGDA----YCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSS 393
Query: 262 RRHRIDLCPCNDGE-DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C G+ DI A+ L+ E L G + S++++ L + + +
Sbjct: 394 TYNTLIKGYCKSGQADI--AERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVG 451
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM + P + ++ L K G +A+E+ + + KG V T + N LL GLC+A
Sbjct: 452 EMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDT-KTSNALLHGLCEA 510
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G K++ + G V + +Y L+ G C + + EA ++EM+ + P T
Sbjct: 511 GKLEEGFRIQKEILGR-GFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYT 569
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
Y++LIRGL ++ K EA+ + + +PD+ +S ++ CC +K +++
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG-CCKAERTEEGQKLFDEM 628
Query: 501 SS 502
S
Sbjct: 629 MS 630
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 193/457 (42%), Gaps = 16/457 (3%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A+++F + +E PN Y ++I L S R E ++M E ++
Sbjct: 271 AIELFSKMEEAGVVPNV----VTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYS 326
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCY 143
++ +A ++ +A + K +++ +N L+ +++ L +A I L
Sbjct: 327 ILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSK 386
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G + S + N L+ C+ ++D+A + +EM G ++ S+ ++ LC+ +
Sbjct: 387 GLSLTS--STYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFD 444
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A + M R G G + TL+ LC GK A+++ K L KG
Sbjct: 445 SALRFVGEMLLRNMSPGGG----LLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTS 500
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C G+ EG + + E L RG + SY+ + ++ E +DEM
Sbjct: 501 NALLHGLCEAGKLEEGFR-IQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMV 559
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
KG P Y + L V+EA++ + G +P V Y++++ G C A +
Sbjct: 560 KKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG-MIPDVYTYSVMIDGCCKAERT 618
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+M N Y L+ CR GR A + E+M + P TY
Sbjct: 619 EEGQKLFDEMMSN-NLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTS 677
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LI+G+ I + EA + LEEM + P++ +++L+
Sbjct: 678 LIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALI 714
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
V + KG +PS L +L + + E +V P V ++ +
Sbjct: 205 VFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH--VVCKGVSPDVYLFTTAINAF 262
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A+ KM ++ G V N TY ++DGL GR+ EA E+M+ R P
Sbjct: 263 CKGGKVEEAIELFSKM-EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPT 321
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ TY++L++GL + +A L+EM + P++ V+++L+ S+
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSL 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 43/301 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L E + K + V S+NTL+ KL+ A +F+ +K
Sbjct: 510 AGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEA-FMFMDEMVKKGLKPDNY 568
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+ L + + A+ + + G PD +Y +++ G C R E L M
Sbjct: 569 TYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
Q + V+Y L+ A C G++ A+++ E + KG+ +P S + + +
Sbjct: 629 MSNNLQP----NTVVYNHLIGAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMS 683
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN------------------------ 308
+E AK L+ E + G P++ Y+A+ ID Y
Sbjct: 684 IISRVEEAKLLLEEMRMEGLEPNVFHYTAL-IDGYGKLGQMVKVECLLREMHSKNVHPNK 742
Query: 309 ------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+G + E ++L EMR KG P + Y+ + K G V +A + +E
Sbjct: 743 ITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802
Query: 357 E 357
E
Sbjct: 803 E 803
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 12/381 (3%)
Query: 101 SLFKNLSQFNCVNWTQS-FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+F LS+ +T + F L+ + +E A ++ Y +V +Q+ N+++D
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVY----YKMDVLPAMQACNMVLD 166
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + R D V+ +M +G P+ +Y L+ G C +A + +F + +K
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKA----FRLFDEMIEK 222
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+VIY L+ LC + +I +A + + G+ P + + ++
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKK 281
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L E L G +P++ ++ + L +V K L +M + G P++ +Y +
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K G + EAL + E+ K +P V Y+IL+KGLC A L++M K+ G
Sbjct: 342 GYCKAGNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK-GF 399
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ N TY L+DG C++G +A V +M + P + T++ LI G C GK A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 460 WLEEMISQAKLPDISVWSSLV 480
EM+ + LPD+ +++L+
Sbjct: 460 LYTEMVIKGLLPDVVAYTALI 480
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 203/476 (42%), Gaps = 36/476 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T L +Q L A ++F E EK +P +Y +I L +RI+E
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV----VIYTILIRGLCGESRISE 246
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ + M+ + T + Y + + +A+ L+ + + +F L+
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILID 306
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ K ++ +A FL + V I N L+D C+ AL + E++
Sbjct: 307 GLCKTDEMVSAR-KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y IL+KGLC R+ EA LL M +KG + V Y TL+ C +G ++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++ ++ KG++ + C G+ +E A L E +I+G +P + +Y+A+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK-MEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ +G E ++ EM+ G P++ + L KDG + +A+++ + K
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF---LAKTGT 537
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
T N L + LC N Y L+ GLC DGR +AS
Sbjct: 538 DTTGSKTNELDRSLCS---------------------PNHVMYTALIQGLCTDGRIFKAS 576
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ +M P V T V+I+G + +M +++ +P+ SV+ L
Sbjct: 577 KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 187/418 (44%), Gaps = 25/418 (5%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
+S + +VF I ++ G + EA+ ++ + + + Q+ N +L +VK+ + +
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDT 176
Query: 134 AHILFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDL--ALHVFQEMDFQGCYPDR 186
+ YG ++ +R S N+ L+D C R+ D A +F EM + +P
Sbjct: 177 -----MWKVYG-DMVARGASPNVVTYGTLIDGCC--RQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y IL++GLC + R++EA SMF + G ++ Y T++ C ++ A++
Sbjct: 229 VIYTILIRGLCGESRISEAE----SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ ++L GL + C E + K LI+ A G +P++ Y+ +
Sbjct: 285 LYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF-GVVPNIFVYNCLIDGY 343
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + E + E+ P + Y + L ++EA + + +EM K F+P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA-DGLLQEMKKKGFLPN 402
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
YN L+ G C GN A+ +M+++ G N T+ L+DG C+ G+ A +
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM+I+ P V Y LI G G EA +EM P++ S L+ +C
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 33/410 (8%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--------------C 142
N+A+ LF ++S+ + + + ++ +KL A +R C
Sbjct: 51 NQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICC 110
Query: 143 YGWEVKSRIQS-------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ V SR++S +L+ + + AL V+ +MD P ++ ++++ G
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDG 167
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R + ++ ++ + +G+ ++V Y TL+ C QG A ++ ++++ K
Sbjct: 168 LVKKGRFDT----MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + I + I A+S+ G +P+L +Y+ M + +
Sbjct: 224 I-FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFK-DGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ EM G P++V + + L K D MV +I+ M VP + VYN L+
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID--MASFGVVPNIFVYNCLI 340
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C AGN + A+ ++ K + + TY IL+ GLC R EA +L+EM + +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TYN LI G C G +A+ +M + P+I +S+L+ C
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 187/406 (46%), Gaps = 9/406 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L++A+S F + + F LL + K K + + + + + + +L
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAK-MKHYSTVLSLSKKMDSFGIPPDVYTLT 95
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
++++ C R D AL V ++ G PD ++ L++GLC ++ EA +F +
Sbjct: 96 IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEA----LDVFDK 151
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G ++V Y TL+ LC ++ +A+ + +++ KG+ + + CN E
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ +L+NE + +P++ S + + L EG++ E V+D M G P +V Y
Sbjct: 212 -WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
A + +DEA++V + MV+ V V YN L+ G C A+ ++M +
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDM-MVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCR 329
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
Q + N TY L+ GLC GR +A + EM+ P + TY++L+ LC +
Sbjct: 330 Q-ELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
EA+ L+ + PD+ V++ + + C DL R L+
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGM-CRAGDLEAARDLFSNLA 433
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 180/403 (44%), Gaps = 10/403 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
FA + + A+ + +SL K + F + ++ ++++ A + L
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFA-LSVLAKI 117
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + L+ LC + AL VF +M +G P+ +Y LM GLC DR+L
Sbjct: 118 LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQL 177
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA +L F + KG DI Y +L+ ALC+ + + +L ++++ +
Sbjct: 178 TEALNL----FSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +G+ E + + +I+GG+ P + +Y+A+ + E KV D
Sbjct: 234 LNIVVDALCKEGKVTEAHD--VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDM 291
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G ++V Y + K +D+A+ + EE M + +P Y+ L+ GLC G
Sbjct: 292 MVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE-MCRQELIPNTMTYSTLIHGLCHVG 350
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ +M G + N TY IL+D LC++ R EA +L+ + + P V+ Y
Sbjct: 351 RLQDAIALFNEMVA-CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N+ I G+C G A + + PD+ + ++ +C
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLC 452
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 8/412 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ + + +++ L +I E +V D+M G+ + + T + + QL EA+
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL 181
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+LF + ++N+L+ + + + L L ++ + SLN+++D
Sbjct: 182 NLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL-LNEMVKSKIMPNVVSLNIVVDA 240
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + A V M G PD +Y LM G C ++EA +F + + G
Sbjct: 241 LCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAV----KVFDMMVRNG 296
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y TL+ C +I AM + E++ R+ L + C+ G ++ A
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR-LQDA 355
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L NE + G IP+L +YS + L R+ E +L + P + +Y +
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ + G ++ A ++ +G P V +NI+++GLC G A ++M + GC+
Sbjct: 416 MCRAGDLEAARDLFSNLAPRG-LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN-GCL 473
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
NG TY + GL ++ + A ++LEEML R + V T +L++ L G
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 202/432 (46%), Gaps = 11/432 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ +L +SN + V ++ KG+ + F I+ G L++ + +
Sbjct: 119 TFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 177
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + TL+ K +E LF + +V + + +L++ +
Sbjct: 178 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGE-LDVVANQYTYTVLINGFFKMGL 236
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ ++++M G P+ +Y+ ++ CND +LN A + +F + ++G ++V
Sbjct: 237 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA----FELFDEMRERGVACNVV 292
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ LC + ++ +A +++ ++ R GL + + C+ G +++ A SL N+
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIG-NLDKASSLFNQ 351
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEG-DKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G PSLA+Y+ + I ++E + G ++ EM +G PS V Y + AL +
Sbjct: 352 MKSSGQSPSLATYNIL-IAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 410
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+++A + I M K V + +Y +L+ GLC G+ A K + ++ N
Sbjct: 411 NIEKAFQ-IYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD-EMHLKPNDVI 468
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G C++G A R+L+EM P V +YN I LC K EA + L++MI
Sbjct: 469 YNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMI 528
Query: 466 SQAKLPDISVWS 477
P IS+W+
Sbjct: 529 ELGLKPSISIWN 540
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 190/452 (42%), Gaps = 56/452 (12%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLE 132
DS + I + R+ QL E + N + V + +FN LL ++K + E
Sbjct: 76 DSFPTHVLIHEAIINAHVRS-QLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFE 134
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A +F + VK + S +++ C+ D V +M+ G P+ Y L
Sbjct: 135 KAWRVFNET--KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTL 192
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV----IYRTLLFALCDQGKIQDAMQI 247
+ G C + + L Y M GE D+V Y L+ G +D +++
Sbjct: 193 IDGCCKNGDIERGKQLFYKM---------GELDVVANQYTYTVLINGFFKMGLKKDGIEL 243
Query: 248 LEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
EK+ G+ P + +C C NDG+ + A L +E RG ++ +Y+ + L
Sbjct: 244 YEKMKLTGI-VPNVYTYNSMICRCCNDGK-LNNAFELFDEMRERGVACNVVTYNTLIGGL 301
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
E R++E ++++ M+ G P+L+ Y + G +D+A + + G P+
Sbjct: 302 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ-SPS 360
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMS-------------------------------- 394
+ YNIL+ G +A NSA +++M
Sbjct: 361 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 420
Query: 395 --KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
++ G VA+ YG+L+ GLC G EAS++ + + P YN +I G C G
Sbjct: 421 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEG 480
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y A+ L+EM +P+++ ++S + +C
Sbjct: 481 SSYRALRLLKEMGENGMVPNVASYNSTIXILC 512
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G+LN A LF + + ++NTL+ + +E ++ A L R + + S
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG-LSPNLIS 328
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+D C D A +F +M G P +Y+IL+ G + T ++ M
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM- 387
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPC 271
+G V Y L+ AL I+ A QI + + GL A + LC
Sbjct: 388 ---EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV 444
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D ++ ++E ++ P+ Y+ M EG ++L EM G P++
Sbjct: 445 GDMKEASKLFKSLDEMHLK---PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 501
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
Y + + L KD EA EV+ ++M++ P++ ++N++ K D
Sbjct: 502 ASYNSTIXILCKDEKWTEA-EVLLKDMIELGLKPSISIWNMISKARFD 548
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 43/319 (13%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
A ++F E +E+ N Y ++IG L + R+ E + ++ +MK D + T
Sbjct: 274 NAFELFDEMRER--GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 331
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y G L++A SLF + ++N L+ E+K A +R
Sbjct: 332 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF-SEAKNSAGVTDMVREMEAR 390
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + +LMD L + + A ++ M+ G D Y +L+ GLC + EA
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ L F + + + VIY T+++ C +G A+++L+++
Sbjct: 451 SKL----FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM-------------- 492
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
GE+ G +P++ASY++ L + + E + +L +M
Sbjct: 493 --------GEN--------------GMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIEL 530
Query: 326 GFWPSLVMYEAKLAALFKD 344
G PS+ ++ A F +
Sbjct: 531 GLKPSISIWNMISKARFDN 549
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/564 (21%), Positives = 223/564 (39%), Gaps = 102/564 (18%)
Query: 16 QIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
++ P AL+ F+ A + P H M+ ++ + R+ +M EV D M+
Sbjct: 141 HALRSADGPAEALERFRSAARR-PRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQI 199
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES----KL 131
+ FA G L A + + V ++N L+ +VK L
Sbjct: 200 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 259
Query: 132 EAAHIL------------------------------FLRSCYGWEVKSRIQSLNLLMDVL 161
E ++ LR VK + S + + VL
Sbjct: 260 EVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 319
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--------- 212
Q RR D A + EM+ +GC PD ++ +L++ LC+ R+++A + + M
Sbjct: 320 GQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 379
Query: 213 ---------------------FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
W + G +++V Y ++ ALC G++ +A+++ ++
Sbjct: 380 VTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 439
Query: 251 ILRKGL--------------------------------KAPKSRRHRIDLCPCNDGEDIE 278
+ +KG+ PK + L G+ E
Sbjct: 440 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE 499
Query: 279 GAKSLINEALIR--GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
K++ L++ G +P + + +A+ L GR+ +V E++ G P + Y
Sbjct: 500 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 559
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K DEA+++ + M++ VP V V N L+ L AG A ++ K+
Sbjct: 560 MIKCCSKASKFDEAVKIFYD-MIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL-KE 617
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+ TY L+ GL R+G+ E +LEEM +Y P + TYN ++ LC G +
Sbjct: 618 MNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVND 677
Query: 457 AVMWLEEMISQAKLPDISVWSSLV 480
A+ L M ++ +PD+S +++++
Sbjct: 678 ALDMLYSMTTKGCIPDLSSYNTVI 701
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 209/476 (43%), Gaps = 49/476 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S++++ E ++ M ++C V + I T +AG+ +EA +F L
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ N ++NTLL + +E K+ E H+L Y + + N ++D LC+
Sbjct: 616 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL--EEMYHSNYPPNLITYNTILDCLCKNG 673
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ AL + M +GC PD SY+ ++ GL + R NEA +S+F ++ +K D
Sbjct: 674 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA----FSIFCQM-KKVLIPDY 728
Query: 226 VIYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRI------------------ 266
T+L + G +++A+ I+ E L+ G K +S H +
Sbjct: 729 ATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAE 788
Query: 267 ------------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
LCP C + +E A L+ + G SY+++ L +E
Sbjct: 789 IIASSGITLDDFFLCPLIKHLCKQKKALE-AHELVKKFKSFGVSLKTGSYNSLICGLVDE 847
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I + + EM+ G P Y L A+ K ++E L+V +EEM + + T
Sbjct: 848 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV-QEEMHRKGYESTYVT 906
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y MS+ G TYG L+DGL + GR +A + E
Sbjct: 907 YNTIISGLVKSRRLEQAIDLYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML YN+L+ G G + ++M+ Q PDI ++ ++ ++C
Sbjct: 965 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 1020
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 208/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +L L + K A +IF + KE N Y +++ L ++ E+
Sbjct: 587 PDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEM--NLEPTDGTYNTLLAGLGREGKVKEVM 644
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++++M + + T + + G +N+A+ + +++ C+ S+NT++ +
Sbjct: 645 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 704
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALHVFQEMDFQ-G 181
VKE + A +F + K I L +L + L ALH+ +E Q G
Sbjct: 705 VKEERYNEAFSIFCQM-----KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPG 759
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
DR S H LM+G+ T I+ G D L+ LC Q K
Sbjct: 760 SKTDRSSCHSLMEGILK----KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKA 815
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++++K G+ K+ + +C D I+ A+ L E G P +Y+
Sbjct: 816 LEAHELVKKFKSFGVSL-KTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 874
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + RI E KV +EM KG+ + V Y ++ L K +++A+++ M +G
Sbjct: 875 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 934
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F PT Y LL GL AG A +M + GC AN Y IL++G G +
Sbjct: 935 -FSPTPCTYGPLLDGLLKAGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIAGNTEK 992
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++M+ + P +++Y ++I LC G+ + + + +++ PD+ ++ L+
Sbjct: 993 VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 1051
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 156/368 (42%), Gaps = 34/368 (9%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+K + K+ K AH L ++ + V + S N L+ L D+A +F EM
Sbjct: 805 LIKHLCKQKKALEAHEL-VKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL 863
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD +Y++L+ + R+ E + M +KG V Y T++ L +
Sbjct: 864 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM----HRKGYESTYVTYNTIISGLVKSRR 919
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE---------DIEGAKSLINEALIRG 291
++ A+ + ++ +G PC G IE A++L NE L G
Sbjct: 920 LEQAIDLYYNLMSQGFSP----------TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 969
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDK----VLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ Y+ L N RI + + +M +G P + Y + L K G +
Sbjct: 970 CKANCTIYNI----LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1025
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++ L + + G P + YN+L+ GL + AV +M K+ G V N TY
Sbjct: 1026 NDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK-GIVPNLYTYN 1083
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+ L + G+ EA ++ EE+L + + P V TYN LIRG G A MI
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1143
Query: 468 AKLPDISV 475
LP+ S
Sbjct: 1144 GCLPNSST 1151
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 160/352 (45%), Gaps = 11/352 (3%)
Query: 13 YLSQIIK---KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+L +IK KQK L A ++ K+ K + + Y S+I L + N I + +
Sbjct: 801 FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS--YNSLICGLVDENLIDIAEGLFA 858
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+MK C + + + ++ ++ E + + + + + + ++NT++ +VK
Sbjct: 859 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 918
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+LE A L+ + + L+D L + R + A ++F EM GC + Y
Sbjct: 919 RLEQAIDLYY-NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 977
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL+ G R+ T + +F + +G DI Y ++ LC G++ D +
Sbjct: 978 NILLNG----HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 1033
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L GL+ P + + + + +E A SL NE +G +P+L +Y+++ + L
Sbjct: 1034 QLLEMGLE-PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1092
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
G+ E K+ +E+ TKG+ P++ Y A + G D A +V G
Sbjct: 1093 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1144
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 15/378 (3%)
Query: 114 WTQSFNT---LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
W ++F++ +L+ + + A LF R + + S I L+ V+ + R D+
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVV 102
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F++M G P + +I+M +C + A+ L M + G D+V + +
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM----KLGFEPDLVTFTS 158
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL C +I+DA+ + ++IL G K + C C + + A L N+
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN-RHLNHAVELFNQMGTN 217
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +Y+A+ L GR + +L +M + P+++ + A + A K G + EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGI 408
E + M++ + P V Y L+ GLC G + A + YL + + GC N Y
Sbjct: 278 KE-LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN---GCYPNEVIYTT 333
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G C+ R + ++ EM + TY VLI+G C +G+ A +M S+
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 469 KLPDISVWSSLVASVCCN 486
PDI ++ L+ +CCN
Sbjct: 394 APPDIRTYNVLLDGLCCN 411
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 158/328 (48%), Gaps = 7/328 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C R + A+ +F ++ G P+ +Y L++ LC +R LN A L F ++
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL----FNQM 214
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
GS ++V Y L+ LC+ G+ DA +L ++++ ++ + G+
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E AK L N + P + +Y ++ L G + E ++ M G +P+ V+Y
Sbjct: 275 ME-AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K V++ +++ E KG T+ Y +L++G C G VA +MS +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+ TY +L+DGLC +G+ +A + E M R + TY ++I+G+C +GK +
Sbjct: 393 RA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A + S+ P++ ++++++ C
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFC 479
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 8/360 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F +LL +++E A LF G K + + L+ LC+ R + A+ +F +
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALF-DQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G P+ +Y+ L+ GLC R +A LL M R + +++ + L+ A
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE----PNVITFTALIDAFV 269
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK+ +A ++ +++ + + C G ++ A+ + G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL-LDEARQMFYLMERNGCYPNE 328
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + R+ +G K+ EM KG + + Y + G D A EV +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M P +R YN+LL GLC G A+M + M K+ + N TY I++ G+C+
Sbjct: 389 -MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI-NIVTYTIIIQGMCKL 446
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G+ +A + + + P V TY +I G C G +EA ++M LP+ SV+
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 8/359 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S++ NRI + + DQ+ G + + T IR + LN AV LF +
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ + + + A L LR ++ + + L+D + +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWL-LRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A ++ M YPD +Y L+ GLC L+EA MF+ + + G + VI
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ----MFYLMERNGCYPNEVI 330
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ C +++D M+I ++ +KG+ A + C G + A+ + N+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP-DVAQEVFNQM 389
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R P + +Y+ + L G++ + + + MR + ++V Y + + K G V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++A ++ KG P V Y ++ G C G A KKM K+ G + N Y
Sbjct: 450 EDAFDLFCSLFSKG-MKPNVITYTTMISGFCRRGLIHEADSLFKKM-KEDGFLPNESVY 506
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 16/334 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K + A+++F + R N Y +++ L E R +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN--GSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M E F I + + G+L EA L+ + Q + ++ +L+ +
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 126 VKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L+ A +F CY EV L+ C+ +R + + +F EM +G
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEV-----IYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
+ +Y +L++G C R + A + F ++S + + DI Y LL LC GK+
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEV----FNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ A+ I E + ++ + I C G+ +E A L +G P++ +Y+
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK-VEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
M G I E D + +M+ GF P+ +Y+
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 44/421 (10%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+++ T I +A + A+ L ++ ++ TL+ + K L+AA L L+
Sbjct: 11 AIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQAL-LQ 69
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + L+D LC+ RR A+ + M GC PD +Y+ L+ GLC
Sbjct: 70 KMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMAN 129
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+++A +L + + G D+V Y T + LC GK+ +++LE++ R G+
Sbjct: 130 RMDDAGLVLQELMI---ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186
Query: 261 SRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
I LC N I+ A + L RG +P +YS M +L R+ ++V
Sbjct: 187 VTFCSIISGLCKANR---IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEV 243
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF--------------- 363
L+ M G + Y + AL + G ++ A E+ M G
Sbjct: 244 LEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCR 303
Query: 364 -------------------VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+P + YN ++ GLC +GN A +KM C +
Sbjct: 304 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 363
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWLEE 463
+ L+ G C+ GR +A ++L+EM ++ P V TYN +I G G +A + LEE
Sbjct: 364 FFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEE 423
Query: 464 M 464
M
Sbjct: 424 M 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 14/371 (3%)
Query: 118 FNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+NTL+ + K K A +L + + G++ + + + L+D LC+ D A + Q+
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYD--ASVVTYTTLIDGLCKSGDLDAAQALLQK 70
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC P+ +Y L+ GLC RR ++A + M + G D+V Y +L+ LC
Sbjct: 71 MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML----RSGCEPDLVTYNSLIHGLC 126
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGI-P 294
++ DA +L++++ + + P + + C G+ +G + L E + RGGI P
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML--EEMDRGGISP 184
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ ++ ++ L RI + +V M +G P + Y L L + +D EV+
Sbjct: 185 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVL 244
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E MVK Y L+ L AG+ A + + + + GCV T+ + LC
Sbjct: 245 EH-MVKSGHYALSATYAPLIHALIRAGDIESAS-WAYEQAMEAGCVMEVYTHNAFIGALC 302
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI-SQAKLPDI 473
R G+F A +L M+ P + +YN +I GLC G +A +M+ S PD+
Sbjct: 303 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 362
Query: 474 SVWSSLVASVC 484
+++L++ C
Sbjct: 363 IFFNTLISGFC 373
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 181/425 (42%), Gaps = 40/425 (9%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
++R + +Y ++I L ++ + E++ M + + + T I ++G L+ A
Sbjct: 5 HFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAA 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+L + ++ C ++ L+ + K + A I ++ + + + N L+
Sbjct: 65 QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA-IQTVKRMLRSGCEPDLVTYNSLIH 123
Query: 160 VLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
LC R D A V QE+ + G PD +Y+ + GLC +L++ +L M +
Sbjct: 124 GLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM----DR 179
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK----------SRRHRIDL 268
G D+V + +++ LC +I DA Q+ + +L +G SR +R+D
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239
Query: 269 CP------CNDGE------------------DIEGAKSLINEALIRGGIPSLASYSAMAI 304
G DIE A +A+ G + + +++A
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L G+ +L M G P+L+ Y + L K G VD+A ++ + + G
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 359
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V +N L+ G C AG + A LK+M + CV + TY ++DG + G +A
Sbjct: 360 PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKL 419
Query: 425 VLEEM 429
+LEEM
Sbjct: 420 LLEEM 424
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M ++ F +Y +A L K ALE++ G + +V Y L+ GLC +G
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANG-YDASVVTYTTLIDGLCKSG 59
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A L+KM+ GC N TY L+DGLC+ R +A + ++ ML P + TY
Sbjct: 60 DLDAAQALLQKMA-DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTY 118
Query: 442 NVLIRGLCSIGKQYEAVMWLEE-MISQAKLPDISVWSSLVASVC 484
N LI GLC + +A + L+E MI ++PD+ +++ ++ +C
Sbjct: 119 NSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLC 162
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 7/230 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++FK E+ + Y+ M+ LS +NR+ ++EV++ M + +A
Sbjct: 205 AFQVFKGMLER--GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPL 262
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I RAG + A ++ + CV + N + + + K A + L
Sbjct: 263 IHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS 322
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + S N ++D LC+ D A + ++M D C PD ++ L+ G C RL++A
Sbjct: 323 LPNLL-SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LL M ++ D+V Y T++ G ++ A +LE++ G
Sbjct: 382 QQLLKEM---KAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 199/471 (42%), Gaps = 39/471 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + ++ TE V+ +M+ C+ + TYARAG EA +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + T ++NT++ +++ A LF R V + + + NL+ +L + R
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN-VNTYNLIFGMLGKKSR 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE-ATHLL---------------- 209
L + +EM GC P+R +++ ++ +C R + + T +L
Sbjct: 407 FTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 210 ---------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ M+ + G + Y LL L QG A I+ K+L+
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G K P + + + L G + G +S+ E + PS + I + R+
Sbjct: 526 GFK-PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG 584
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+K E++ +G+ P LV++ + LA K+G+ +A E+ + G P + YN L+
Sbjct: 585 VEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG-LSPDLITYNSLM 643
Query: 375 KGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ S A LK++ S QV + +Y +++G C+ G EA R+L EM+
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVK--PDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
PCV TY+ L+ G S+ EA + MI P + +V S C
Sbjct: 702 MAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYC 752
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 7/286 (2%)
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIE 278
GS D+ Y T+L AL G+ + A+Q+ ++ R+G+ P + + L G
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 233
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
+L+ E G P + S + +G + + ++++ +G P +V Y A L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K G EAL V+ +EM P YN L AG A L M+ + G
Sbjct: 294 QVFGKAGNYTEALRVL-KEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK-G 351
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY ++ GR EA + + M Y P V TYN LI G+ ++ A+
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYN-LIFGMLGKKSRFTAM 410
Query: 459 M-WLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSC 503
+ LEEM P+ W++++A VC + + L + SC
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSC 455
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 199/471 (42%), Gaps = 39/471 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + ++ TE V+ +M+ C+ + TYARAG EA +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + T ++NT++ +++ A LF R V + + + NL+ +L + R
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN-VNTYNLIFGMLGKKSR 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE-ATHLL---------------- 209
L + +EM GC P+R +++ ++ +C R + + T +L
Sbjct: 407 FTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 210 ---------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ M+ + G + Y LL L QG A I+ K+L+
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G K P + + + L G + G +S+ E + PS + I + R+
Sbjct: 526 GFK-PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG 584
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+K E++ +G+ P LV++ + LA K+G+ +A E+ + G P + YN L+
Sbjct: 585 VEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG-LSPDLITYNSLM 643
Query: 375 KGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ S A LK++ S QV + +Y +++G C+ G EA R+L EM+
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVK--PDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
PCV TY+ L+ G S+ EA + MI P + +V S C
Sbjct: 702 MAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYC 752
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 7/286 (2%)
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIE 278
GS D+ Y T+L AL G+ + A+Q+ ++ R+G+ P + + L G
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 233
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
+L+ E G P + S + +G + + ++++ +G P +V Y A L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K G EAL V+ +EM P YN L AG A L M+ + G
Sbjct: 294 QVFGKAGNYTEALRVL-KEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK-G 351
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY ++ GR EA + + M Y P V TYN LI G+ ++ A+
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYN-LIFGMLGKKSRFTAM 410
Query: 459 M-WLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSC 503
+ LEEM P+ W++++A VC + + L + SC
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSC 455
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 199/471 (42%), Gaps = 39/471 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + ++ TE V+ +M+ C+ + TYARAG EA +
Sbjct: 197 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 256
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + T ++NT++ +++ A LF R V + + + NL+ +L + R
Sbjct: 257 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN-VNTYNLIFGMLGKKSR 315
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE-ATHLL---------------- 209
L + +EM GC P+R +++ ++ +C R + + T +L
Sbjct: 316 FTAMLEMLEEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 374
Query: 210 ---------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ M+ + G + Y LL L QG A I+ K+L+
Sbjct: 375 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 434
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G K P + + + L G + G +S+ E + PS + I + R+
Sbjct: 435 GFK-PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG 493
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+K E++ +G+ P LV++ + LA K+G+ +A E+ + G P + YN L+
Sbjct: 494 VEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG-LSPDLITYNSLM 552
Query: 375 KGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ S A LK++ S QV + +Y +++G C+ G EA R+L EM+
Sbjct: 553 DMYAKSNESWEAEKILKQLKSSQVK--PDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 610
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
PCV TY+ L+ G S+ EA + MI P + +V S C
Sbjct: 611 MAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYC 661
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 7/287 (2%)
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIE 278
GS D+ Y T+L AL G+ + A+Q+ ++ R+G+ P + + L G
Sbjct: 84 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 142
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
+L+ E G P + S + +G + + ++++ +G P +V Y A L
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 202
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K G EAL V+ +EM P YN L AG A L M+ + G
Sbjct: 203 QVFGKAGNYTEALRVL-KEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK-G 260
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ N TY ++ GR EA + + M Y P V TYN LI G+ ++ A+
Sbjct: 261 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYN-LIFGMLGKKSRFTAM 319
Query: 459 M-WLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ LEEM P+ W++++A VC + + L + SC
Sbjct: 320 LEMLEEMSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLNGMKSCG 365
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 51/351 (14%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL---FLRSC 142
IR + + G+ +A + + + V ++N L+ M + ++A +L R C
Sbjct: 126 IRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGC 185
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + N+L++ LC+ A+ V ++M GC P+ SY+ L+ G C ++++
Sbjct: 186 -----SPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKM 240
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
A L M + +G DIV Y TLL ALC GK+ A++
Sbjct: 241 ERAIEYLGKM----TSRGCYPDIVTYNTLLTALCKDGKVDAAVE---------------- 280
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
L+N+ +G P L +Y+ + L G+ + K+LDEM
Sbjct: 281 --------------------LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
R KG P ++ Y + + L ++G VDEA++ + V G P YN ++ GLC A
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGV-KPNAITYNAIMLGLCKARK 379
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ A+ +L M Q GC +Y IL++GL +G EA +L E+ +R
Sbjct: 380 TDRAIDFLAYMV-QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L ++V+ +LE Y ++ I +L+ C+ ++ A + + ++
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRG-FCKIGKTRKATRIMEIIE 146
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G PD +Y++L+ G+C+ R +A LL M R G +V + L+ LC +
Sbjct: 147 DSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRR----GCSPSVVTFNILINFLCRK 202
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G + A+ +LEK+ PK G P+ S
Sbjct: 203 GLLGRAIDVLEKM-------PK-----------------------------HGCTPNSLS 226
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + E ++ + L +M ++G +P +V Y L AL KDG VD A+E++ +
Sbjct: 227 YNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLS 286
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG P + YN ++ GL G + A L +M + G + TY LV GL R+G+
Sbjct: 287 SKGC-SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK-GLKPDIITYSSLVGGLSREGK 344
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA + ++ + P TYN ++ GLC K A+ +L M+ + P + ++
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404
Query: 479 LV 480
L+
Sbjct: 405 LI 406
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 43/301 (14%)
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+ + ES + L K L + L E L SM +R G DI+ +L+ C GK +
Sbjct: 82 FEEIESNNNLSK-LVRNGELEEGFRFLESMVYR----GDIPDIIPCTSLIRGFCKIGKTR 136
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A +I+E I ED G +P + +Y+ +
Sbjct: 137 KATRIMEII-----------------------ED-------------SGAVPDVITYNVL 160
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+ + GR ++ +K+L +M +G PS+V + + L + G++ A++V+E+ M K
Sbjct: 161 ISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEK-MPKHG 219
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P YN LL G C A+ YL KM+ + GC + TY L+ LC+DG+ A
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR-GCYPDIVTYNTLLTALCKDGKVDAA 278
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+L ++ + P + TYN +I GL +GK +A L+EM ++ PDI +SSLV
Sbjct: 279 VELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGG 338
Query: 483 V 483
+
Sbjct: 339 L 339
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 147/341 (43%), Gaps = 49/341 (14%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
+ ++ + T + E+I+ DS D + + I G+ +A L ++ + C
Sbjct: 132 IGKTRKATRIMEIIE----DSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSP 187
Query: 114 WTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
+FN L+ + ++ L A +L +G S S N L+ C+ ++ + A+
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNS--LSYNPLLHGFCKEKKMERAIE 245
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+M +GCYPD +Y+ L+ LC D +++ A LL ++S KG ++ Y T++
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLN----QLSSKGCSPVLITYNTVI 301
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
L GK A ++L+++ KGLK
Sbjct: 302 DGLSKVGKTDQAAKLLDEMRAKGLK----------------------------------- 326
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P + +YS++ L EG++ E K ++ G P+ + Y A + L K D A++
Sbjct: 327 -PDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ MV+ PT Y IL++GL G + A+ L ++
Sbjct: 386 FL-AYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEVIEEEMVKGT 362
L G + EG + L+ M +G P ++ + + K G +A +E+IE+
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA--- 150
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP V YN+L+ G+C G A L M ++ GC + T+ IL++ LCR G A
Sbjct: 151 -VPDVITYNVLISGMCSTGRWMDAEKLLADMVRR-GCSPSVVTFNILINFLCRKGLLGRA 208
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
VLE+M P +YN L+ G C K A+ +L +M S+ PDI +++L+ +
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268
Query: 483 VCCNTADLNVCRKTLEQLSS 502
+ C ++ + L QLSS
Sbjct: 269 L-CKDGKVDAAVELLNQLSS 287
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 16/285 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + + R + ++++ M C F I R G L A+ + + +
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-----RSCYGWEVKSRIQSLNLLMDVL 161
+ C + S+N LL KE K+E A I +L R CY I + N L+ L
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERA-IEYLGKMTSRGCY-----PDIVTYNTLLTAL 269
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + D A+ + ++ +GC P +Y+ ++ GL + ++A LL M KG
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM----RAKGL 325
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
DI+ Y +L+ L +GK+ +A++ + G+K + I L C + A
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK-ARKTDRAI 384
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + RG P+ ASY+ + L EG E ++L+E+ +G
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L+ L ++G ++E +E + +G +P + L++G C G + A ++ + +
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGD-IPDIIPCTSLIRGFCKIGKTRKATRIME-IIEDS 148
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G V + TY +L+ G+C GR+++A ++L +M+ R P V T+N+LI LC G A
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRA 208
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ LE+M P+ ++ L+ C
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFC 235
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + ++ E+++Q+ C + T I ++ G+ ++A L +
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++++L+ + +E K++ A I F VK + N +M LC+ R+
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEA-IKFFHDLEVLGVKPNAITYNAIMLGLCKARK 379
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
+D A+ M +GC P SY IL++GL + EA LL + R + +K S E +
Sbjct: 380 TDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKV 439
Query: 226 VI 227
+
Sbjct: 440 AV 441
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 15/378 (3%)
Query: 114 WTQSFNT---LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
W ++F+ +L+ + + A LF R + + S I L+ V+ + +R D+
Sbjct: 43 WIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPS-IVDFTRLLSVIAKMKRFDVV 101
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F++M G P + +I+M +C + A+ L M + G D+V + +
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM----KLGFEPDLVTFTS 157
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL C +I+DA+ + ++I+ G + + C C + + A + N+
Sbjct: 158 LLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN-RHLNHAVEIFNQMGDN 216
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +Y+++ L GR + +L +M +G P+++ + A + A K G + EA
Sbjct: 217 GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGI 408
E + + M++ + P V Y L+ GLC G + A + YL + + G N TY
Sbjct: 277 KE-LYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN---GYYPNEVTYTT 332
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G C+ R + +++ EM + TY VLI+G C +G+ A +M S+
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 469 KLPDISVWSSLVASVCCN 486
PDI ++ L+ +C N
Sbjct: 393 APPDIRTYNVLLDGLCYN 410
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 182/402 (45%), Gaps = 8/402 (1%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SLF+ + + N ++ + + S+ A FL
Sbjct: 85 FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRAS-CFLGKM 143
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + + L+ C R + AL +F ++ G P+ +Y L+ LC +R L
Sbjct: 144 MKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHL 203
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N A + F ++ G ++V Y +L+ LC+ G+ DA +L ++++G++
Sbjct: 204 NHAVEI----FNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ G+ +E AK L + P + +Y+A+ L GR+ E ++ M
Sbjct: 260 FTALIDAFVKVGKIME-AKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ G++P+ V Y + K V++ ++ E KG T+ Y +L++G C G
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI-TYTVLIQGYCLVGR 377
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VA +M + + TY +L+DGLC +G +A + + M R + TY
Sbjct: 378 PDVAQEVFNQMGSRRA-PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYT 436
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++I+G+C +GK +A + S+ P++ ++++++ C
Sbjct: 437 IIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 192/450 (42%), Gaps = 13/450 (2%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F EA + + H+ P+ + ++ ++++ R + + +QM+
Sbjct: 63 FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ R+ Q A + + +F +LL +++E A LF G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALF-DQIVGM 181
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + + L+ LC+ R + A+ +F +M G P+ +Y+ L+ GLC R ++A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M ++G +++ + L+ A GKI +A ++ + +++ +
Sbjct: 242 AWLLRDMM----KRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G ++ A+ + G P+ +Y+ + R+ +G K+ EM K
Sbjct: 298 LINGLCTYGR-LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + + Y + G D A EV + M P +R YN+LL GLC G
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQ-MGSRRAPPDIRTYNVLLDGLCYNGYVEK 415
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+M K M K+ + N TY I++ G+C+ G+ +A + + + P V TY +I
Sbjct: 416 ALMIFKYMRKREMDI-NIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G C G +EA ++M LP+ SV
Sbjct: 475 SGFCRRGFIHEADALFKKMKEDGFLPNESV 504
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 176/388 (45%), Gaps = 21/388 (5%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG-WEVKSR 150
+G +N A ++K +++ +N +L K ++ ++C+ WE+ R
Sbjct: 2 ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRI--------KNCFDLWELMGR 53
Query: 151 -----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S N +M L D +++ M G D +Y IL+ G C + N++
Sbjct: 54 EGSRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKS 113
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
H+L Q+G D Y ++ LC GK+ A+ +L ++ G K P ++ +
Sbjct: 114 LHVLEIA----KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCK-PNTQVYN 168
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ E A + E R P++ +Y+ + L R E ++ EM K
Sbjct: 169 ALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK 228
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G+ PS++ Y + L +D V+ AL++ + + KG F P V+++NIL+ GLC G +
Sbjct: 229 GWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKG-FKPDVQMHNILIHGLCSVGKTEH 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A M+ C N TY L++G + G A + +L P + +YN+ +
Sbjct: 288 ASELYFDMN-HWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITL 346
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDI 473
+GLC+ + A+++L + +++ +P +
Sbjct: 347 KGLCACNRISVAILFLNDAVTKNIVPTV 374
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 145/319 (45%), Gaps = 8/319 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A V++EM PD Y+ ++ G R+ L W + +
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDL-----WELMGREG 55
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++ + T++ L + G++ + I E + G + + C +G + +
Sbjct: 56 SRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYN-NKSL 114
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ A GG +YSAM L G++ + VL+ M G P+ +Y A + L
Sbjct: 115 HVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++A+ V +E + PT+ YN L+ GLC A A +K+M ++ G
Sbjct: 175 LGASKFEDAIRVFKELGTRHC-SPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK-GWNP 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +L+ GLC+D + A ++ +++ + + P V+ +N+LI GLCS+GK A
Sbjct: 233 SVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELY 292
Query: 462 EEMISQAKLPDISVWSSLV 480
+M P++ +++L+
Sbjct: 293 FDMNHWNCAPNLVTYNTLM 311
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++MI L + ++ + V++ M C+ V+ I A + +A+ +FK L
Sbjct: 132 YSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELG 191
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRR 166
+C ++NTL+ + K + A+ L GW + + +LL+ LCQ +
Sbjct: 192 TRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGW--NPSVITYSLLIKGLCQDHK 249
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-FWRISQKGSGEDI 225
++AL ++ ++ +G PD + ++IL+ GLC+ + A+ L + M W + ++
Sbjct: 250 VEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAP-----NL 304
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKS 282
V Y TL+ G ++A+ I +ILR GL P + I LC CN I A
Sbjct: 305 VTYNTLMEGFYKGGDTRNALVIWARILRNGL-LPDIISYNITLKGLCACN---RISVAIL 360
Query: 283 LINEALIRGGIPSLAS 298
+N+A+ + +P++ +
Sbjct: 361 FLNDAVTKNIVPTVIT 376
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 177/390 (45%), Gaps = 10/390 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I L + ++ E + QM C ++AT I + G A +
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 306
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +NT+LK + + E A L L + + + N+L+D CQ
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL-LAEMFQEDCPLDDVTFNILVDFFCQ 365
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D + + ++M GC PD +Y ++ G C + ++EA LL +M S G
Sbjct: 366 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM----SACGCKP 421
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ + Y +L LC + DA +++ ++++G L P + I+ C G +E A
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM-CKKGL-VEQAIE 479
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+ + L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + +AL
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
++G D+ +++ + + T +YN ++ LC + A+ + M GC+ N
Sbjct: 540 REGRTDKIIQMF-DSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPN 597
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIR 432
TY IL+ GL +G EA +L E+ R
Sbjct: 598 ESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 198/443 (44%), Gaps = 14/443 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L I + V+D+M C + + R G AV
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ L C + + N ++ + ++ ++ + LR + + I S N ++ LC
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEG-VELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R D + EM GC P+ +++ L+ LC + + L M + G
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM----PEHGCTP 281
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ +Y T++ +C G + A IL ++ GLK P + L E E A+ L
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAERWEEAEDL 340
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV---LDEMRTKGFWPSLVMYEAKLAA 340
+ E + + P + +D + + +V D+V L++M G P ++ Y +
Sbjct: 341 LAE-MFQEDCPLDDVTFNILVDFFCQNGLV--DRVIELLEQMLEHGCIPDVITYTTVING 397
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+G+VDEA+ +++ G P Y I+LKGLC A A + M +Q GC+
Sbjct: 398 FCKEGLVDEAVMLLKNMSACGC-KPNTISYTIVLKGLCRAERWVDAQELISHMIQQ-GCL 455
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N T+ L++ +C+ G +A +L++ML+ P + +Y+ +I GL GK EA+
Sbjct: 456 PNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 515
Query: 461 LEEMISQAKLPDISVWSSLVASV 483
L MI++ P+ ++SS+ +++
Sbjct: 516 LNVMINKGITPNTIIYSSMASAL 538
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 191/434 (44%), Gaps = 16/434 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ + E + E E++ ++ CE + ++ A + ++ L + +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNTL+ + + E H L +G R+ + ++D +C+ ++
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYAT--IIDGICKDGHHEV 301
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A + M G P+ Y+ ++KGLC+ R EA LL MF Q+ D V +
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF----QEDCPLDDVTFN 357
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C G + +++LE++L G + C +G ++ A L+
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL-VDEAVMLLKNMSA 416
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+ SY+ + L R V+ +++ M +G P+ V + + + K G+V++
Sbjct: 417 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQ 476
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N Y +
Sbjct: 477 AIELLKQMLVNGC-SPDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNTIIYSSM 534
Query: 410 VDGLCRDGR---FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L R+GR ++ +++ +RS YN +I LC + A+ + M+S
Sbjct: 535 ASALSREGRTDKIIQMFDSIQDATVRSD---AALYNAVISSLCKRWETDRAIDFFAYMVS 591
Query: 467 QAKLPDISVWSSLV 480
+P+ S ++ L+
Sbjct: 592 NGCMPNESTYTILI 605
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 168/391 (42%), Gaps = 8/391 (2%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G ++E V L + L F C S+N +LK + + + L + + +
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR-VGCPPNVAT 250
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+ LC+ + +M GC PD Y ++ G+C D A +L
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS--- 307
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ G ++V Y T+L LC + ++A +L ++ ++ + + C +
Sbjct: 308 -RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 366
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++ L+ + L G IP + +Y+ + EG + E +L M G P+ +
Sbjct: 367 GL-VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 425
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L L + +A E+I M++ +P +N L+ +C G A+ LK+M
Sbjct: 426 YTIVLKGLCRAERWVDAQELISH-MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
GC + +Y ++DGL + G+ EA +L M+ + P Y+ + L G+
Sbjct: 485 LVN-GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + + + D ++++++++S+C
Sbjct: 544 TDKIIQMFDSIQDATVRSDAALYNAVISSLC 574
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 153/365 (41%), Gaps = 57/365 (15%)
Query: 135 HILFLRSCYGWEVKSRIQSL---------------NLLMDVLCQCRRSDLALHVFQEMDF 179
H++ +C G +S +++L NL++ +C+ D + + +++
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
GC PD SY+ ++KGLC +R ++ L+ M + G ++ + TL+ LC G
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV----RVGCPPNVATFNTLIAYLCRNG 262
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ + L ++ G P L Y
Sbjct: 263 LFEQVHEALSQMPEHGCT------------------------------------PDLRMY 286
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + + +G + +L M + G P++V Y L L +EA +++ E
Sbjct: 287 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 346
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ + V +NIL+ C G + L++M + GC+ + TY +++G C++G
Sbjct: 347 EDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLEH-GCIPDVITYTTVINGFCKEGLV 404
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +L+ M P +Y ++++GLC + +A + MI Q LP+ +++L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464
Query: 480 VASVC 484
+ +C
Sbjct: 465 INFMC 469
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 9/262 (3%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++ +LC +G I DA+ +L+++ +G A H I C G G +S +
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG----GFRSAVRAL 166
Query: 288 LI---RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ +G + + + + +G + EG ++L ++ + G P +V Y A L L
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D+ E++ E MV+ P V +N L+ LC G L +M + GC +
Sbjct: 227 KRWDDVEELMVE-MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH-GCTPDLR 284
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y ++DG+C+DG A+ +L M P V YN +++GLCS + EA L EM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
Query: 465 ISQAKLPDISVWSSLVASVCCN 486
+ D ++ LV C N
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQN 366
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 187/438 (42%), Gaps = 44/438 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F+ I +AG+L EAV + + + +CV + N LL + + K++ A +F
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF--- 61
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMK------ 194
G + + +LN+L++ C+ + D AL +F EM+ P+ +Y ++K
Sbjct: 62 -RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 195 ---------------------------GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
G C +R++EA LL M + +K + DIV
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM---VEKKSAKPDIVA 177
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL-INE 286
+ ++ C G++++A ++LE ++ G + C G E + +
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P++ +++A+ L R+ +++ +M+ + Y + L K G
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E V EE + +G P+V Y L+ C AG+ A ++ M + G + TY
Sbjct: 298 TSEVSRVFEEMLREGCN-PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK-GIPPDVTTY 355
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++GL +G+ A+ E++L PC Y+ L+RG C EAV + EM+
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD + LV +C
Sbjct: 416 RRLAPDPATCKLLVEMLC 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 18/306 (5%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+R ++ +L+ GLC RL EA M R DI + LL +LC GK+
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNL-RDINL---LLASLCQAGKMDQ 56
Query: 244 AMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSA 301
AM I +G++ +P I + + + ++ A L +E +P +Y+A
Sbjct: 57 AMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF-KDGMVDEALEVIEEEMVK 360
+ R+ + ++L+E S V+ +A F K VDEA +++ + + K
Sbjct: 112 IIKCYCKMDRLDQARQLLEE---SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEK 168
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+ P + +N+++ G C AG A L+ + +GCV N TY L+DG C+ G
Sbjct: 169 KSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLV-SMGCVPNAVTYTTLIDGFCKSGNLS 227
Query: 421 EASRVLEEMLIRSYW--PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA ++ + + R + P V T+N LI GLC + A +++M ++ D +++
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287
Query: 479 LVASVC 484
L+ +C
Sbjct: 288 LMDGLC 293
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P +++L+ GLC AG AV +M ++ CV N +L+ LC+ G+ +A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGKMDQAMA 59
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ-AKLPDISVWSSLVASV 483
+ + P V T N+LI G C + +A+ EM A +P+ + +++++
Sbjct: 60 IFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 484 CCNTADLNVCRKTLEQLSSCS 504
C L+ R+ LE+ S CS
Sbjct: 117 -CKMDRLDQARQLLEESSCCS 136
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 51/372 (13%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D+M+ C + + + G++++A+ KNL + C T S+N +LK +
Sbjct: 13 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 72
Query: 126 VKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ E A L + C + + N+L+ LC+ + AL V +++ G
Sbjct: 73 CTAERWEDAEELMGEMGQKGC-----PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C P+ SY+ L+ C +++++A L M R G DIV Y TLL ALC G++
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR----GCYPDIVSYNTLLTALCRSGEV 183
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A+++L ++ KG P L SY+
Sbjct: 184 DVAVELLHQLKDKGCA------------------------------------PVLISYNT 207
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L G+ E ++L+EM +KG P ++ Y A L ++ +++A+ + G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P +YN ++ GLC + A+ M GC+ N TY IL++GL +G E
Sbjct: 268 -IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKE 325
Query: 422 ASRVLEEMLIRS 433
A +L+E+ R
Sbjct: 326 ARDLLDELCSRG 337
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 7/318 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N++++ +CQ R D A+ + + GC P+ SY+I++KGLC R +A L+
Sbjct: 27 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 86
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M QKG ++V + L+ LC +G ++ A+++LE+I + G P S + L
Sbjct: 87 EM----GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC-TPNSLSYNPLLHA 141
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ ++ A + ++ + RG P + SY+ + L G + ++L +++ KG P
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
L+ Y + L K G EALE++ E + KG P + Y+ + GLC A+
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAF 260
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K+ + +G N Y ++ GLC+ A + M+ P TY +LI GL
Sbjct: 261 GKV-QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 319
Query: 451 IGKQYEAVMWLEEMISQA 468
G EA L+E+ S+
Sbjct: 320 EGLIKEARDLLDELCSRG 337
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C +A LL M KG DIV Y ++ +C +G++ DA++ L+ + G
Sbjct: 3 CKRSGYKQAMKLLDEM----RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGC 58
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ P + + I L E E A+ L+ E +G P++ +++ + L +G +
Sbjct: 59 E-PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 117
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VL+++ G P+ + Y L A K +D+A+ ++ + +G + P + YN LL
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY-PDIVSYNTLLTA 176
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC +G VAV L ++ K GC +Y ++DGL + G+ EA +L EM+ + P
Sbjct: 177 LCRSGEVDVAVELLHQL-KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 235
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TY+ + GLC + +A+ ++ P+ ++++++ +C
Sbjct: 236 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 283
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 39 PNY--RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
P+Y N Y ++ L + R + +E++ +M C F I R G +
Sbjct: 54 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 113
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HILFLRSCYGWEVKSRIQ 152
A+ + + + ++ C + S+N LL K+ K++ A ++ R CY I
Sbjct: 114 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY-----PDIV 168
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N L+ LC+ D+A+ + ++ +GC P SY+ ++ GL + EA LL M
Sbjct: 169 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
KG DI+ Y T+ LC + +I+DA++ K+ G++ + I L C
Sbjct: 229 V----SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
E A L + G +P+ ++Y+ + L EG I E +LDE+ ++G
Sbjct: 285 RRE-THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 184/393 (46%), Gaps = 14/393 (3%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRIQS 153
++A++LF+ + + + F+ + + + L L C E + I +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN----LVLDFCKQLELNGIAHNIYT 115
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN++++ C+C ++ A V ++ G PD +++ L+KGL + +++EA L+
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD--- 172
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ + G D+V Y +++ +C G A+ +L K+ + +KA I C D
Sbjct: 173 -RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 231
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G I+ A SL E +G S+ +Y+++ L G+ +G +L +M ++ P+++
Sbjct: 232 G-CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ L K+G + EA E+ +E + +G P + YN L+ G C + A L M
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ C + T+ L+ G C R + +V + R TY++L++G C GK
Sbjct: 350 VRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A +EM+S LPD+ + L+ +C N
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 200/434 (46%), Gaps = 23/434 (5%)
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
E + F T I+ G+++EAV L + + C ++N+++ + + A +
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA-L 203
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
LR VK+ + + + ++D LC+ D A+ +F+EM+ +G +Y+ L++GL
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C + N+ LL M R +++ + LL +GK+Q+A ++ ++++ +G+
Sbjct: 264 CKAGKWNDGALLLKDMVSREIVP----NVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI-PSLASYSAMAIDLYNEGRI 312
+ I DG ++ S N L +R P + +++++ R+
Sbjct: 320 SP-----NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+G KV + +G + V Y + + G + A E+ +E MV +P V Y I
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGI 433
Query: 373 LLKGLCDAGNSAVAVMYLKKMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
LL GLCD G A+ + + K +G V Y +++G+C+ G+ +A + +
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ P V TY V+I GLC G EA + L +M P+ +++L+ + D
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH-LRDGD 548
Query: 490 LNVCRKTLEQLSSC 503
L K +E++ SC
Sbjct: 549 LTASAKLIEEMKSC 562
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE-------------CKDS------ 81
Y + + ++I L +++E ++D+M + C+ C+
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 203
Query: 82 ----------------VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++T I + R G ++ A+SLFK + + ++N+L++ +
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K +L L+ E+ + + N+L+DV + + A +++EM +G P+
Sbjct: 264 CKAGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ D M
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ I ++GL A + C G+ I+ A+ L E + G +P + +Y +
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 496
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 497 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 555
Query: 426 LEEM 429
+EEM
Sbjct: 556 IEEM 559
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 177/385 (45%), Gaps = 14/385 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ ++IG L + + +V+ QM C ++AT + + G L A + +
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +NT+LK + + E A L L + + + N+L+D CQ
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEEL-LAEMFDNDCPLDDVTFNILVDFFCQNGLV 381
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ + ++M GC PD +Y ++ G C + ++EA LL SM + G + +
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM----AACGCRPNTIS 437
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y +L LC + DA ++ +++ +G + + C G +E A L+ +
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL-VEQAIELLKQM 496
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L+ G P L SYS + L G+ E ++L+ M KG P+ ++Y + +AL K+G +
Sbjct: 497 LLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRI 556
Query: 348 DEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ +++ I++ ++ V +YN ++ LC G + A+ +L M GC+ N
Sbjct: 557 NRVIQMFDNIQDVTIRSDAV----LYNAVISSLCKRGGTDRAIEFLAYMVSS-GCMPNES 611
Query: 405 TYGILVDGLCRDGRFLEASRVLEEM 429
TY IL+ GL +G EA +L E+
Sbjct: 612 TYTILIRGLASEGFVKEAQEMLTEL 636
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 202/446 (45%), Gaps = 15/446 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR---TYARAGQLNEAV 100
N Y ++ L RI + V+D+M+ C ++ + + G AV
Sbjct: 114 NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAV 173
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKE--SKLEAAHILF-LRSCYGWEVKSRIQSLNLL 157
+ ++L C + N +L + + S EA +L L + +G + + S N +
Sbjct: 174 RVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCD--PDVVSYNAV 231
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ LC +R + +EM GC P+ +++ L+ LC + +L M
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV---- 287
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G DI +Y T+L +C +G ++ A +IL+++ GLK P + L E
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLK-PNVVCYNTVLKGLCSAERW 346
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A+ L+ E +++ + G + ++L++M G P ++ Y
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K+G++DEA+ +++ G P Y I+LKGLC A A + +M +Q
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCR-PNTISYTIVLKGLCSAERWVDAEDLMSQMIEQ- 464
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
GC N T+ +++ LC+ G +A +L++ML+ P + +Y+ +I GL GK EA
Sbjct: 465 GCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEA 524
Query: 458 VMWLEEMISQAKLPDISVWSSLVASV 483
+ L M+++ P+ ++SS+ +++
Sbjct: 525 LELLNVMVNKGMSPNTIIYSSIASAL 550
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 10/424 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L + R +++++++M C F T I R G + +
Sbjct: 228 YNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV 287
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C + + T+L + KE LE AH IL YG +K + N ++ LC R
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG--LKPNVVCYNTVLKGLCSAER 345
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + EM C D +++IL+ C + + LL M + G D++
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML----EHGCVPDVI 401
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C +G I +A+ +L+ + G + P + + I L E A+ L+++
Sbjct: 402 TYTTVINGFCKEGLIDEAVMLLKSMAACGCR-PNTISYTIVLKGLCSAERWVDAEDLMSQ 460
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G P+ +++ + L +G + + ++L +M G P L+ Y + L K G
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
DEALE++ + KG P +Y+ + L G + + + V ++ Y
Sbjct: 521 TDEALELLNVMVNKG-MSPNTIIYSSIASALSKEGRINRVIQMFDNI-QDVTIRSDAVLY 578
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ LC+ G A L M+ P TY +LIRGL S G EA L E+ S
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638
Query: 467 QAKL 470
+ L
Sbjct: 639 KGAL 642
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 173/406 (42%), Gaps = 46/406 (11%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA--AHILFLR 140
+ +R G++ +A+S+ + + C ++ +L+ + + L+
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQ 177
Query: 141 SCYGWEVKSRIQSLNLLMDVLC-QCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCN 198
+G + + NL+++ +C Q D AL + +++ GC PD SY+ ++KGLC
Sbjct: 178 DLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCM 237
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+R L+ M + G ++V + TL+ LC G + Q+L +++ G
Sbjct: 238 AKRWGRVQDLMEEMV----RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT- 292
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + Y+ + + EG + ++
Sbjct: 293 -----------------------------------PDIRMYATVLDGVCKEGHLEVAHEI 317
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
LD M + G P++V Y L L ++A E++ E + V +NIL+ C
Sbjct: 318 LDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV-TFNILVDFFC 376
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G + L++M + GCV + TY +++G C++G EA +L+ M P
Sbjct: 377 QNGLVYRVIELLEQMLEH-GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNT 435
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+Y ++++GLCS + +A + +MI Q P+ +++++ +C
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 167/395 (42%), Gaps = 11/395 (2%)
Query: 92 RAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+ G ++EA+ L ++L + F C S+N +LK + + L +
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDL-MEEMVRVGCPPN 259
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L+ LC+ + V +M GC PD Y ++ G+C + L A +L
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
R+ G ++V Y T+L LC + + A ++L ++ + +
Sbjct: 320 ----RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFF 375
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G + L+ + L G +P + +Y+ + EG I E +L M G P+
Sbjct: 376 CQNGL-VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPN 434
Query: 331 LVMYEAKLAALFK-DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ Y L L + VD E + +M++ P +N ++ LC G A+
Sbjct: 435 TISYTIVLKGLCSAERWVDA--EDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
LK+M GC + +Y ++DGL + G+ EA +L M+ + P Y+ + L
Sbjct: 493 LKQMLLN-GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ + + + D +++++++S+C
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 128/315 (40%), Gaps = 39/315 (12%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ ++ G C +L A L S+ + Y ++ ALC +G+I DA+ +L
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV-------PVPPNAYTYFPVVRALCARGRIADALSVL 138
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA--MAIDL 306
+++ R+G H I +E A S R + L A+D+
Sbjct: 139 DEMRRRGCAPIPPMYHVI----------LEAACSRGGGGGFRSAVRVLQDLHGRGCALDV 188
Query: 307 YN-----------EGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKD---GMVDEAL 351
N G + E ++L ++ T G P +V Y A L L G V + +
Sbjct: 189 GNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLM 248
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E EMV+ P V +N L+ LC G L +M GC + Y ++D
Sbjct: 249 E----EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH-GCTPDIRMYATVLD 303
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G+C++G A +L+ M P V YN +++GLCS + +A L EM
Sbjct: 304 GVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL 363
Query: 472 DISVWSSLVASVCCN 486
D ++ LV C N
Sbjct: 364 DDVTFNILVDFFCQN 378
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 227/520 (43%), Gaps = 55/520 (10%)
Query: 6 PRLLTPTYLSQ-IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P+ L T L+ +I KQ P +IF K K +R N +++ L SN +
Sbjct: 137 PKPLLDTSLAAYVISKQ--PHLGHQIFN--KMKRLRFRPNLLTCNTLLNALVRSNSSHSL 192
Query: 65 ---KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
+EV + + F I Y EA+ L + ++ C ++NT+
Sbjct: 193 VFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTV 252
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L + K S+L L L+ +R + N+L+ C+ + A V + M +G
Sbjct: 253 LTALCKRSQLTQVRDLLLQMKNSGLFPNR-NTYNILVHGYCKLKWLKEAAEVIELMTGKG 311
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGSGEDIVIYRTLLFALCDQG 239
PD +Y+ +++GLC++ +++EA L M F + D+V Y TL+ +
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVP------DVVTYNTLIDGCFEHR 365
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
A +++E++ +G+K + + C +G+ I+ A +++ + + G P +Y
Sbjct: 366 GSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK-IDEASNVMVKMVESGFSPDCFTY 424
Query: 300 SAMAIDLYNEGRIVEGDKVLDEM-----------------------------------RT 324
+ M G++ E K++DEM R
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G+ V Y + FKD D AL+ + EEM + V T+ YN +++GLC +G +
Sbjct: 485 RGYILDEVTYGTLIMGYFKDEQADRALK-LWEEMKETGIVATIITYNTIIRGLCLSGKTD 543
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
AV L ++ ++ G V + T I++ G C +G +A + +M+ S P + T N+L
Sbjct: 544 QAVDKLNELLEK-GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+RGLC G + + IS+ K D ++ +++S C
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFC 642
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 215/483 (44%), Gaps = 52/483 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + +++T++++++ QMK + + + Y + L EA + + +
Sbjct: 248 TYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELM 307
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++NT+++ + E K++ A + +++ + + N L+D + R
Sbjct: 308 TGKGMLPDVWTYNTMVRGLCDEGKIDEA-VRLRDKMESFKLVPDVVTYNTLIDGCFEHRG 366
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
SD A + +EM +G + +++I++K C + +++EA++++ M + G D
Sbjct: 367 SDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMV----ESGFSPDCF 422
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y T++ C GK+ +A ++++++ RKGLK + + C + + ++ A +L +
Sbjct: 423 TYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ-LDDAYTLTMK 481
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A RG I +Y + + + + + K+ +EM+ G +++ Y + L G
Sbjct: 482 ARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGK 541
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV--------- 397
D+A++ + E + KG VP NI++ G C G A + KM +
Sbjct: 542 TDQAVDKLNELLEKG-LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCN 600
Query: 398 -------------------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
G + TY I++ C++ R +A ++ EM +
Sbjct: 601 ILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGK 660
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEA---VMWLEEMISQAKLPDIS--------VWSSLVA 481
+ P TYN ++ GL G+ EA + E Q K D S ++S ++
Sbjct: 661 NLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQIS 720
Query: 482 SVC 484
S+C
Sbjct: 721 SLC 723
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 159/382 (41%), Gaps = 56/382 (14%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM--KGDSCECKDSVFA 84
A K+ +E K + + NG + MI +I E V+ +M G S +C +
Sbjct: 370 AFKLVEEMKAR--GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDC--FTYN 425
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS--- 141
T I Y +AG++ EA + + + T + NTLL M E +L+ A+ L +++
Sbjct: 426 TMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR 485
Query: 142 -------CYG------------------WE------VKSRIQSLNLLMDVLCQCRRSDLA 170
YG WE + + I + N ++ LC ++D A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ E+ +G PD + +I++ G C + + +A + ++ + DI
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA----FQFHNKMVEHSLKPDIFTCNI 601
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL LC +G ++ + + + KG K + + I + +E A L+ E +
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKG-KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGK 660
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVL-------DEMRTKGFWPSL----VMYEAKLA 339
P +Y+A+ L GR E +K+ +++T+ P L +MY +++
Sbjct: 661 NLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQIS 720
Query: 340 ALFKDGMVDEALEVIEEEMVKG 361
+L G +A+++ ++ KG
Sbjct: 721 SLCTQGKYKDAMKLFQQAEQKG 742
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 34/253 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
ALK+++E KE G V Y ++I L S + + + ++++ +S
Sbjct: 510 ALKLWEEMKE-------TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
I Y G + +A + + + + N LL+ + +E LE LF
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF--- 619
Query: 142 CYGWEVKSR---IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
W K + + N+++ C+ RR + A + EM+ + PDR +Y+ ++ GL
Sbjct: 620 -NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678
Query: 199 DRRLNEATHLLYSMFWRISQKGS-----------GEDIVIYRTLLFALCDQGKIQDAMQI 247
R EA L + ++KG G ++Y + +LC QGK +DAM++
Sbjct: 679 AGRTEEAEKLAL----KFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKL 734
Query: 248 LEKILRKGLKAPK 260
++ +KG+ K
Sbjct: 735 FQQAEQKGVSLNK 747
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 13/327 (3%)
Query: 160 VLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+L C++ L A + EM +GC P+ +Y IL+ C + RL EA ++L M S
Sbjct: 21 ILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM----S 76
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGE 275
KG + V Y L+ ALC K+QDA+ + + KG K + + LC N E
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 136
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A L + L+ G I + +Y+ + G + E K++++M +G + Y
Sbjct: 137 E---ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 193
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL + G +++ L + E+ M KG P NIL+ GLC GN A+ +L+ M
Sbjct: 194 GLIKALCRAGNIEKGLALFEDMMSKG-LNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + TY L++GLC+ GR EA + +++ + P TYN LI C G
Sbjct: 253 R-GLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVAS 482
+A + L + +P+ W LV++
Sbjct: 312 DAHLLLSRGVDSGFIPNEVTWYILVSN 338
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 149/304 (49%), Gaps = 7/304 (2%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD +Y+ L+ GLC L A L+ M KG +++ Y L+ C +G+
Sbjct: 9 GCGPDIFTYNTLILGLCKKGYLVSARELMNEM----QIKGCEPNVITYTILIDRFCKEGR 64
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A +L+++ KGL + + C D E ++ A ++ + +G P + +++
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKD-EKVQDALNMFGDMSSKGCKPDIFTFN 123
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L + E + +M +G + + Y + A + G + EAL+++ + + +
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G + + YN L+K LC AGN + + M + G N + IL++GLCR G
Sbjct: 184 GCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQ 241
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
A L +M+ R P + TYN LI GLC G+ EA+ +++ + PD +++L+
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301
Query: 481 ASVC 484
+ C
Sbjct: 302 SWHC 305
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 16/342 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
++NTL+ + K+ L +A L ++ C + + + +L+D C+ R + A +
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGC-----EPNVITYTILIDRFCKEGRLEEARN 70
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
V EM +G + Y+ L+ LC D ++ +A +MF +S KG DI + +L+
Sbjct: 71 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDA----LNMFGDMSSKGCKPDIFTFNSLI 126
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
F LC K ++A+ + + +L +G+ A + + G ++ A L+N+ L RG
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA-MQEALKLVNDMLFRGC 185
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+Y+ + L G I +G + ++M +KG P+ + + L + G + ALE
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ + + +G P + YN L+ GLC G + A+ K+ + G + TY L+
Sbjct: 246 FLRDMIHRG-LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDAITYNTLISW 303
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
C++G F +A +L + + P T+ +L+ G Q
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 345
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 156/345 (45%), Gaps = 18/345 (5%)
Query: 45 GP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
GP Y ++I L + + +E++++M+ CE + I + + G+L EA +
Sbjct: 11 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLL 157
+ +S +N L+ + K+ K++ A +F + C K I + N L
Sbjct: 71 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC-----KPDIFTFNSL 125
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ LC+ + + AL ++Q+M +G + +Y+ L+ + EA L+ M +R
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR-- 183
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G D + Y L+ ALC G I+ + + E ++ KGL + + C G +I
Sbjct: 184 --GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG-NI 240
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A + + + RG P + +Y+++ L GR E + D+++ +G P + Y
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
++ K+GM D+A ++ V F+P + IL+ G+
Sbjct: 301 ISWHCKEGMFDDA-HLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ E M+ P + YN L+ GLC G A + +M + GC N TY IL+D
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK-GCEPNVITYTILIDRF 59
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C++GR EA VL+EM + YN LI LC K +A+ +M S+ PDI
Sbjct: 60 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 119
Query: 474 SVWSSLVASVC 484
++SL+ +C
Sbjct: 120 FTFNSLIFGLC 130
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 31 FKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F+EA Y + G + Y ++I + E ++++ M C D +
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I+ RAG + + ++LF+++ S N L+ + + ++ A + FLR
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA-LEFLRDMIHR 253
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ I + N L++ LC+ R+ AL++F ++ +G PD +Y+ L+ C + ++A
Sbjct: 254 GLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 313
Query: 206 THLLYS 211
HLL S
Sbjct: 314 -HLLLS 318
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D A + M+ +G Y++LM GLC + R+ EA + M G
Sbjct: 209 CESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV----NIGV 264
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V YRTL++ C +++ A++I ++R G P + E +E A
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF-VPSEANCSFMIDELRKKELVEEAF 323
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL + G +P++ +Y+A+ L R + D++ EM +G P+ V Y + AL
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383
Query: 342 FKDGMVDEALEVIEE----------------------------------EMVKGTFVPTV 367
K GM+++AL + ++ MVK PT
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC G+ + + M L + + G N T+ L++G C+D + EA+R+ +
Sbjct: 444 ASYSPLIAGLCRNGDLS-SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+M+ + P T+NV+I G C +G +A ++M+ PD + SL++ +C +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562
Query: 488 A 488
Sbjct: 563 G 563
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 201/481 (41%), Gaps = 49/481 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ R + + +M G E + +A I + G + +A+ LF +
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+N+L+ K+ L+ A L L + S + L+ LC R
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGL-LSGMVKEGLTPTAASYSPLIAGLC--RNG 457
Query: 168 DLA--LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
DL+ + + +EM +G + ++ L+ G C D++++EA L F ++ +
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL----FDKMIDSNVIPNE 513
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V + ++ C G I+ A Q+ ++++ GLK P + +R + + A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK-PDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM----------------------- 322
+ + + S +A+ + EGR E + DEM
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632
Query: 323 ------------RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ +G P + Y + AL K+ + +AL ++ +V G + P +
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG-YSPNTVTH 691
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ LC +G A + K+M + N TY +D +G +E ++ L +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAG-NVLPNKFTYNCFLDYFATEGD-MEKAKDLHSAM 749
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
++ + + ++N+LI+GLC GK EA+ + ++ PD +S+++ + C D+
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL-CKMGDI 808
Query: 491 N 491
N
Sbjct: 809 N 809
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/491 (19%), Positives = 196/491 (39%), Gaps = 82/491 (16%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ D+M + V+ IR Y + L+ A L + +N L+
Sbjct: 183 RDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG 242
Query: 125 MVKESKLEAA---------------HILFLRSCYGWEVKSRIQSLNLLMDV--------- 160
+ K +++ A + + YG+ R++ L + + +
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF---CRMEELEMALRITHDMIRLGF 299
Query: 161 ----------LCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + R+ +L F ++ G P+ +Y+ L+ LC + R ++A
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L F ++ +G + V Y L+ ALC +G I+DA+ + +K+ KG+K + +
Sbjct: 360 L----FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C G ++ A+ L++ + G P+ ASYS + L G + ++ EM +G
Sbjct: 416 NGYCKQGS-LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+ + A + KD +DEA + ++M+ +P +N++++G C GN A
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLF-DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLC--------------------------------- 414
+M ++G + TY L+ GLC
Sbjct: 534 QLYDQMV-EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592
Query: 415 --RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
R+GRF E + +EM +R + ++ +++ + ++ + EM Q PD
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 473 ISVWSSLVASV 483
++ ++ ++
Sbjct: 653 DIFYTCMIDAL 663
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 182/439 (41%), Gaps = 21/439 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I + + + ++ M + + ++ I R G L+ + L + ++
Sbjct: 411 YNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMA 470
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +F L+ K+ K++ A LF + + + + + N++++ C
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNI 529
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------YSMFWRISQKGS 221
A ++ +M G PD +Y L+ GLC +++A + Y++ S
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS---- 585
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
LL+ +G+ + + +++ +G+K I + D E +
Sbjct: 586 ------LTALLYGFFREGRFTETYHLWDEMAVRGVKL-DLVSFTIIVYAALKQHDKEKSC 638
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L E +G P Y+ M L E +++ D+M G+ P+ V + + L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G + A E++ +EM+ G +P YN L G+ A M + G +A
Sbjct: 699 CKSGYLGSA-ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ--GHLA 755
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ ++ IL+ GLC+ G+ EA ++ ++ + P +Y+ +I LC +G +A
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815
Query: 462 EEMISQAKLPDISVWSSLV 480
EM+ + PD+ ++ +
Sbjct: 816 NEMLYKGLKPDVVAYNIFI 834
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 142/341 (41%), Gaps = 43/341 (12%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L + R+ LA +F +M G + D Y ++ C R L+ A L+ R+ +G
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVV----RMESEG 228
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y L++ LC ++Q+A+++ ++ G+ A + + C E++E A
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR-MEELEMA 287
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ ++ + G +PS A+ S M +DE+R K KL
Sbjct: 288 LRITHDMIRLGFVPSEANCSFM----------------IDELRKKELVEEAFSLACKLGD 331
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L GMV P V YN L+ LC A K+M+ + G
Sbjct: 332 L---GMV-----------------PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLE 370
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LC+ G +A + ++M + V YN LI G C G A
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
L M+ + P + +S L+A +C N DL+ C + +++
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRN-GDLSSCMELHREMA 470
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 181/437 (41%), Gaps = 43/437 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI + + +V +QM + CE ++T I +G++NEA L
Sbjct: 422 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL---- 477
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++EM+ L AH +C G + LC
Sbjct: 478 ---------------IREMILHGILPTAH-----TCTGPII------------ALCDMGC 505
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F +M +GC P+ +Y L+ GLC L A L F R+S+ G + V
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL----FHRMSRDGVFPNTV 561
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L + +I+ A +L + R GL + + C G D + A ++N
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG-DPKKAMLVMNN 620
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L RG +L +Y+ + + G ++LD MR G P Y + K
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + E MV P Y L+ G C A L+ M K+ GC N +TY
Sbjct: 681 MESAFGLFNE-MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM-KRSGCRPNVQTY 738
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL + F A + + M+ +P V TY +I GLC G A+ +MI
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798
Query: 467 QAKLPDISVWSSLVASV 483
Q LP++ +SSL+ ++
Sbjct: 799 QGCLPNLLTYSSLIRAL 815
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 178/425 (41%), Gaps = 56/425 (13%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQ 175
+N ++ + K+ + A + + +E + + +L CR+ DL AL VF
Sbjct: 388 YNAVINALCKDGNVADAETIMKKV---FESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR----ISQKGSGEDIVIYRTL 231
+M +GC P+ +Y L+ GLC+ R+NEA L+ M + +G
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP-------- 496
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ ALCD G +DA ++ + KG + + C G ++ A L + G
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDG 555
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P+ +Y+A+ L RI VL+ M G + ++V Y + G +A+
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK-------------------- 391
V+ + +G V YN ++KG CD+GN+ A+ L
Sbjct: 616 LVMNNMLQRGHSANLV-TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674
Query: 392 --KMSKQV------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
K+SK G N TY L+DG C+D + A+ +LE M P
Sbjct: 675 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD---LNVCR 494
V+TYNVLI GL A + MI + P++ +++++ +C N + L +
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794
Query: 495 KTLEQ 499
K +EQ
Sbjct: 795 KMIEQ 799
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 190/467 (40%), Gaps = 36/467 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I IL E+ RI V++ M + + I+ Y G +A+ +
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLC 162
N+ Q ++NT++K +A IL L G K S L+ C
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG--CKPDEWSYTELICGFC 676
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A +F EM G P+ +Y L+ G C D +L+ AT LL M + G
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM----KRSGCR 732
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ L Q A ++ + ++ +G+ + C +G A
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS-TSLALE 791
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ N+ + +G +P+L +YS++ L EG++ E + + E+ G P + Y + A
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL--------------------CDAG- 381
G V+ A + M+K PT+ Y +L+KGL C G
Sbjct: 852 MSGKVEHAFNFL-GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 910
Query: 382 ----NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AV+VM K G + LV L GR+ EA+ +L M+ + P
Sbjct: 911 QTTDQDAVSVMSAKLAELDPGLSV--QVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E YN L+ L + A+ + M +Q ++ + L+ ++C
Sbjct: 969 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 1015
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 28/412 (6%)
Query: 74 DSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + V TA I Y + +L+ A SL +++ + C Q++N L+ + K++
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + + ++D LC+ + LAL +F +M QGC P+ +Y L
Sbjct: 753 GAEEL-CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++ L + ++ EA +L F + + G D + Y ++ A GK++ A L +++
Sbjct: 812 IRALGQEGKVEEAENL----FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 867
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR----GGIPSLASYSAMAIDLYN 308
+ G + P + + + K L NE L+ +P + + +
Sbjct: 868 KAGCQ-PTLWTYGVLI------------KGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 914
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + L E+ G S+ + A ++ L G EA E++ + +G P
Sbjct: 915 QDAVSVMSAKLAEL-DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQG-LCPDQE 970
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN LL L N +A+ K MS Q GC + Y L+ LC+ R EA E
Sbjct: 971 AYNSLLCSLLRVRNVDLAMGVFKHMSTQ-GCEVHLNGYKELICALCQLHRRKEARITFEN 1029
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML+R++ P VLI GL G + + +L M ++ +P +++ L
Sbjct: 1030 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 1081
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
L +YSA+ I L G M ++G P+L++Y A + AL KDG V +A E I
Sbjct: 349 GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-ETI 407
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+++ + P Y ++ G C + A+ +M+K+ GC N TY L++GLC
Sbjct: 408 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLC 466
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
GR EA ++ EM++ P T I LC +G +A +M ++ P++
Sbjct: 467 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 526
Query: 475 VWSSLVASVC 484
+++L++ +C
Sbjct: 527 TYTALISGLC 536
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 196/400 (49%), Gaps = 15/400 (3%)
Query: 90 YARAGQLNEAVSLFKNLSQFN--CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ R G ++ S+F +S + CVN + + L+ S+ E F RS Y
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
S + L++ +L + R +D+ +V++EM + P+ ++++++ LC ++N+A
Sbjct: 186 LSALSCKPLMIALLKENRSADVE-YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCD---QGKIQDAMQILEKILRKGLKAPKSRRH 264
++ M G ++V Y TL+ C GK+ A +L++++ + +P
Sbjct: 245 VMEDM----KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV-SPNLTTF 299
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ G+ + E L + P++ SY+++ L N G+I E + D+M +
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P+L+ Y A + K+ M+ EAL++ +G VPT R+YN+L+ C G
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA-VPTTRMYNMLIDAYCKLGKID 418
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
++M ++ G V + TY L+ GLCR+G +EA++ L + L P + T+++L
Sbjct: 419 DGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGN-IEAAKKLFDQLTSKGLPDLVTFHIL 476
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ G C G+ +A M L+EM P ++ ++ C
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 30/427 (7%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI +L E NR +++ V +M + F I + G++N+A + +++ +
Sbjct: 195 MIALLKE-NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 111 CVNWTQSFNTLLKEMVK---ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C S+NTL+ K K+ A + L+ +V + + N+L+D +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAV-LKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
++ VF+EM Q P+ SY+ L+ GLCN +++EA SM ++ G +++
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI----SMRDKMVSAGVQPNLIT 368
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
Y L+ C +++A+ + + +G P +R + + + C G+ I+ +L E
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQG-AVPTTRMYNMLIDAYCKLGK-IDDGFALKEE 426
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P + +Y+ + L G I K+ D++ +KG P LV + + + G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A +++E M K P YNI++KG C GN A +M K+ N +Y
Sbjct: 486 SRKAAMLLKE-MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ G + G+ +A+ +L EML + P TY ++ EEM+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV----------------KEEMVD 588
Query: 467 QAKLPDI 473
Q +PDI
Sbjct: 589 QGFVPDI 595
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 9/304 (2%)
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N L + F R G + + L+ AL + + D + ++++R+ ++
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY----NEGRIVEGDKV 318
+ + C G+ + A+ ++ + + G P++ SY+ + ID Y G++ + D V
Sbjct: 226 FNVVINALCKTGK-MNKARDVMEDMKVYGCSPNVVSYNTL-IDGYCKLGGNGKMYKADAV 283
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L EM P+L + + +KD + +++V +E M+ P V YN L+ GLC
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE-MLDQDVKPNVISYNSLINGLC 342
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G + A+ KM G N TY L++G C++ EA + + + P
Sbjct: 343 NGGKISEAISMRDKMV-SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
YN+LI C +GK + EEM + +PD+ ++ L+A +C N ++ +K +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-GNIEAAKKLFD 460
Query: 499 QLSS 502
QL+S
Sbjct: 461 QLTS 464
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T L K + ++K+FKE ++ + + N Y S+I L +I+E
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ--DVKPNVISYNSLINGLCNGGKISEAI 351
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ D+M + + I + + L EA+ +F ++ V T+ +N L+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ L + + + N L+ LC+ + A +F ++ +G PD
Sbjct: 412 CKLGKIDDGFAL-KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PD 469
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++HILM+G C +A LL M S+ G + Y ++ C +G ++ A
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEM----SKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLAS 298
+ ++ K RR R+++ N +E A L+NE L +G +P+ +
Sbjct: 526 NMRTQM-------EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTK 325
Y + ++ ++G + + + L + TK
Sbjct: 579 YEIVKEEMVDQGFVPDIEGHLFNVSTK 605
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 11/304 (3%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD ++ LM GLC + R+ +A L+ M Q Y T++ LC G
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP--------YGTIINGLCKMGD 56
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+ +L K+ +KA + I C DG I A++L E +G P + +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYS 115
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M GR + +++L +M + P +V + A + AL K+G V EA E+ + + +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G F PT YN ++ G C A L M+ + C + T+ L++G C+ R
Sbjct: 176 GIF-PTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVD 233
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ EM R TY LI G C +G A L MIS P+ + S++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 481 ASVC 484
AS+C
Sbjct: 294 ASLC 297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 47/348 (13%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T + G++ +A++L + + Q + T++ + K E+A + L
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVE----EGHQPYGTIINGLCKMGDTESA-LNLLSK 66
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K+ + N ++D LC+ A ++F EM +G +PD +Y ++ C R
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A LL M R D+V + L+ AL +GK+ +A +I +LR+G+
Sbjct: 127 WTDAEQLLRDMIER----QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI----- 177
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P+ +Y++M + R+ + ++LD
Sbjct: 178 -------------------------------FPTTITYNSMIDGFCKQDRLNDAKRMLDS 206
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +K P +V + + K VD +E+ E +G TV Y L+ G C G
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVG 265
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ A L M G N T+ ++ LC +A +LE++
Sbjct: 266 DLDAAQDLLNVMISS-GVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC + T+ L++GLC +GR L+A +++ M+ + P Y +I GLC +G
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ L +M + ++++++ +C
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLC 87
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 33 EAKEKYPNYRHNG--PV---YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA+E Y + G P Y SMI + +R+ + K ++D M SC F+T I
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
Y +A +++ + +F + + V T ++ TL+ + L+AA L
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
>gi|224124330|ref|XP_002329996.1| predicted protein [Populus trichocarpa]
gi|222871421|gb|EEF08552.1| predicted protein [Populus trichocarpa]
Length = 725
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 214/476 (44%), Gaps = 48/476 (10%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L P L +++K +A+KIFK A + + H Y +I L + + EM+
Sbjct: 57 LYPDNLIKVLKSTSDVNSAVKIFKWAALQR-KFNHTADTYYWIIFKLGMAGNVEEMEGFC 115
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
M + C ++ V + + + R +LNEA+ + N++ FN +L +V+E
Sbjct: 116 QNMVKERCTGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEE 175
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ + + V I +LN L++VL + R D AL ++ ++ +GC PD ++
Sbjct: 176 KRGFQDVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKT 235
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
+ I++KGL + R++++ +L+ M + G ++ YRT + C + ++++ +++
Sbjct: 236 FEIVIKGLIANDRVDDSVSILHEML----ELGCLPELSFYRTTIPLFCREDRLEEGIRLF 291
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
K+ P Y A+ L
Sbjct: 292 RKMKESNFT------------------------------------PDSFIYGALIQCLCK 315
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ R+ E +L+EM ++ + K G ++EA++++E++ V T
Sbjct: 316 QLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLLEDKHVLET-----S 370
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+N LL+ CDA +A L+KMS++ + + +++ IL+ LC ++A +L
Sbjct: 371 PHNALLRCCCDADKFLMAKGLLEKMSER--NIDDCDSWNILIRWLCEREEMVKAYELLGR 428
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+I S P TY+ L+ G C + K +A+ ++ ++ + D + +S L+ +C
Sbjct: 429 MIISSLIPDYATYSALVAGNCRLSKYEDALQLFLQLHAKCWILDPASYSELIEGLC 484
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 189/437 (43%), Gaps = 8/437 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ LS S + + KE+I M E + IR Y GQ+ EA L
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + V ++NT++ + K ++ A L L + + S N L+ +
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKL-LDVMVNKNLMPDLVSYNTLIYGYTR 354
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A +F E+ ++ P +Y+ L+ GLC L+ A L M + G
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI----KHGPDP 410
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + T + C G + A ++ +++L +GL+ P + + D A +
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ-PDRFAYITRIVGELKLGDPSKAFGM 469
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E L RG P L +Y+ L+ G + E +++ +M G P V Y + + A
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G + +A + E + KG F P+V Y +L+ G +A+++ +M ++ G N
Sbjct: 530 AGHLRKARALFLEMLSKGIF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNV 587
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L++GLC+ + +A EM + P TY +LI C++G EA+ ++
Sbjct: 588 ITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 647
Query: 464 MISQAKLPDISVWSSLV 480
M+ + PD SL+
Sbjct: 648 MLDREIQPDSCTHRSLL 664
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 194/443 (43%), Gaps = 20/443 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +M+ + + E +++ QM+ C D + + + +G++ +A L +++
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ +++ L++ ++ ++E A S G E+ SR + + N +M LC
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEA------SRLGEEMLSRGAVPTVVTYNTIMYGLC 318
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R A + M + PD SY+ L+ G + EA + +F + +
Sbjct: 319 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA----FLLFAELRYRSLA 374
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+V Y TL+ LC G + AM++ +++++ G C G ++ AK
Sbjct: 375 PSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMG-NLPMAKE 433
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E L RG P +Y + G + + +EM +GF P L+ Y + L
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSKQVGCVA 401
K G + EA E++++ + G VP Y ++ AG+ A ++L+ +SK G
Sbjct: 494 KLGNLKEASELVKKMLYNG-LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK--GIFP 550
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +L+ GR A EM + P V TYN LI GLC + K +A +
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
EM ++ P+ ++ L+ C
Sbjct: 611 AEMQAKGISPNKYTYTILINENC 633
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 7/332 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N ++D C+ AL + +M GC P+ +Y++L+ GL + + +A L+
Sbjct: 202 VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQ 261
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + G + Y L+ C++G+I++A ++ E++L +G + I
Sbjct: 262 DML----RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGL 317
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G + A+ L++ + + +P L SY+ + G I E + E+R + PS
Sbjct: 318 CKWGR-VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + L + G +D A+ +++EM+K P V + ++G C GN +A
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMR-LKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M + G + Y + G + G +A + EEML R + P + TYNV I GL
Sbjct: 436 DEMLNR-GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G EA +++M+ +PD ++S++ +
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 526
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 165/327 (50%), Gaps = 12/327 (3%)
Query: 151 IQSLNLLMDVL--CQCRRSDLA--LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN-EA 205
+ S+ L++D+L ++S L L VF +M +G PD ++ + +++ L DR N +
Sbjct: 127 MPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLR-LLRDRDNNIDV 185
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+Y++ + + G +V Y T+L + C +G +Q+A+Q+L ++ G +P +
Sbjct: 186 AREVYNV---MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGC-SPNDVTYN 241
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + + ++E AK LI + L G S+ +Y + +G+I E ++ +EM ++
Sbjct: 242 VLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR 301
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y + L K G V +A ++++ MV +P + YN L+ G GN
Sbjct: 302 GAVPTVVTYNTIMYGLCKWGRVSDARKLLDV-MVNKNLMPDLVSYNTLIYGYTRLGNIGE 360
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A + ++ + + TY L+DGLCR G A R+ +EM+ P V T+ +
Sbjct: 361 AFLLFAELRYR-SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPD 472
RG C +G A +EM+++ PD
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPD 446
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y L + K GMV EAL+++ + G P YN+L+ GL +G
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGC-SPNDVTYNVLVNGLSHSGEMEQ 255
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A ++ M + +G + TY L+ G C G+ EASR+ EEML R P V TYN ++
Sbjct: 256 AKELIQDMLR-LGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIM 314
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GLC G+ +A L+ M+++ +PD+ +++L+
Sbjct: 315 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 349
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALF-KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
V +M +KG P + L L +D +D A EV MV+ PTV YN +L
Sbjct: 153 VFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV-MVECGICPTVVTYNTMLDS 211
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G A+ L +M + +GC N TY +LV+GL G +A ++++ML
Sbjct: 212 FCKKGMVQEALQLLFQM-QAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV 270
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TY+ LIRG C G+ EA EEM+S+ +P + +++++ +C
Sbjct: 271 SVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLC 318
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 178/379 (46%), Gaps = 9/379 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
+G ++ A ++K++ + +N +L + +++ L+ G E +
Sbjct: 3 SGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELW--EMMGREGSRSVA 60
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N++M L R+ + A+ +++ M G D +Y IL+ G C + +N++ H+L
Sbjct: 61 SFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIA 120
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
QKG D Y ++ ALC + K++ A+ +L ++R G K P + + +
Sbjct: 121 ----EQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCK-PNTHVYNALIKGLI 175
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ A + E P++A+YS + L R E ++ EM KG PS++
Sbjct: 176 GASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVI 235
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L V+ AL++ + KG F P V+++NIL+ GLC G + +A+
Sbjct: 236 TYSLLMKGLCLGHKVEMALQLWNQVTKKG-FKPDVQMHNILIHGLCSVGKTQLALSLYLD 294
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M++ C N T L++G +DG A + +L P + +YN+ ++GLCS
Sbjct: 295 MNRW-NCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCN 353
Query: 453 KQYEAVMWLEEMISQAKLP 471
+ +A+ +L + + + +P
Sbjct: 354 RISDAIWFLHDAVRKKIIP 372
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 6/262 (2%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V+Y +L G+++D ++ E + R+G ++ S I + D +E A S+
Sbjct: 24 DAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSVAS--FNIMMRGLFDNRKVEEAMSI 81
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
G + +Y + G I + +L+ KG Y A + AL K
Sbjct: 82 WELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCK 141
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ +++A+ V+ M++ P VYN L+KGL A AV ++M C N
Sbjct: 142 ESKLEKAVSVLNG-MIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMG-TTDCPPNI 199
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY IL+DGLC+ RF EA +++EML + P V TY++L++GLC +G + E + L
Sbjct: 200 ATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLC-LGHKVEMALQLWN 258
Query: 464 MISQAKL-PDISVWSSLVASVC 484
+++ PD+ + + L+ +C
Sbjct: 259 QVTKKGFKPDVQMHNILIHGLC 280
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 49/336 (14%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
NR E I ++ S +DSV + + + + G +N+++ + + Q V +
Sbjct: 72 NRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFA 131
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
++ ++ + KESKLE A + L K N L+ L + D A+ +F+EM
Sbjct: 132 YSAMINALCKESKLEKA-VSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREM 190
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
C P+ +Y IL+ GLC R EA L+ M +KG ++ Y L+ LC
Sbjct: 191 GTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEML----EKGLNPSVITYSLLMKGLCL 246
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
K++ A+Q+ ++ +KG K P + H I LI+ G+ S+
Sbjct: 247 GHKVEMALQLWNQVTKKGFK-PDVQMHNI----------------LIH------GLCSVG 283
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW---PSLVMYEAKLAALFKDGMVDEALEVI 354
+ +A+ LY LD R W P+LV + +KDG V AL VI
Sbjct: 284 K-TQLALSLY-----------LDMNR----WNCAPNLVTQNTLMEGFYKDGNVRNAL-VI 326
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++K P + YNI LKGLC + A+ +L
Sbjct: 327 WARILKNELQPDIISYNITLKGLCSCNRISDAIWFL 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 8/319 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D A V++++ PD Y+ ++ G R+ + L W + +
Sbjct: 1 CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFEL-----WEMMGREG 55
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + ++ L D K+++AM I E + + G + C +G I +
Sbjct: 56 SRSVASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGY-INKSL 114
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ A +GG+ +YSAM L E ++ + VL+ M G P+ +Y A + L
Sbjct: 115 HILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
D+A+ + E M P + Y+IL+ GLC A +K+M ++ G
Sbjct: 175 IGASKRDDAVRIFRE-MGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEK-GLNP 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +L+ GLC + A ++ ++ + + P V+ +N+LI GLCS+GK A+
Sbjct: 233 SVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 462 EEMISQAKLPDISVWSSLV 480
+M P++ ++L+
Sbjct: 293 LDMNRWNCAPNLVTQNTLM 311
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N VY ++I L +++ + + +M C + ++ I + + EA
Sbjct: 161 KPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYD 220
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L K + + +++ L+K + K+E A L+ K +Q N+L+ L
Sbjct: 221 LVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLW-NQVTKKGFKPDVQMHNILIHGL 279
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKG 220
C ++ LAL ++ +M+ C P+ + + LM+G D + A + W RI +
Sbjct: 280 CSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNAL-----VIWARILKNE 334
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
DI+ Y L LC +I DA+ L +RK + K
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPTK 374
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 213/496 (42%), Gaps = 37/496 (7%)
Query: 9 LTPTYLSQIIKKQK---SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
LTP +L +I SP + L FK ++ ++R + Y +M L ++E +
Sbjct: 65 LTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQH-HFRLSIHSYCTMTHFLCTHKMLSEAQ 123
Query: 66 EVI-----------------DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
++ ++ + VF+ + Y +G ++A+ F+ + +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
N S L ++K + L + F + N+LM LC+ + +
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLN-LTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A +F E+ +G P S++ L+ G C L++ L M + D+ Y
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM----ENRVFPDVFTY 298
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL---IN 285
L+ LC +G++ DA ++ ++ +GL P + +G + G L I
Sbjct: 299 SVLINGLCKEGQLDDANKLFLEMCDRGL-VPND----VTFTTLINGHCVTGRADLGMEIY 353
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ ++R G+ P + +Y+ + L G + E K++ EM +G P Y + K+
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G ++ ALE I +EMVK + L+ G C G A L++M + G +
Sbjct: 414 GDLESALE-IRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDA 471
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY +++ G C+ G ++L+EM + P V TYNVL+ GLC G+ A M L+ M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Query: 465 ISQAKLPDISVWSSLV 480
++ +PD ++ L+
Sbjct: 532 LNLGVVPDDITYNILL 547
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 31/324 (9%)
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWR-------------ISQKGSGEDIVIYRTLLF 233
SY + LC + L+EA LL + R + +G+ + +++ L+
Sbjct: 104 HSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMN 163
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPK-------SRRHRIDLCPCNDGEDIEGAKSLINE 286
A D G DA+Q + + L+ P R +++L A + E
Sbjct: 164 AYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL--------TSPAWAFYEE 215
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P + ++ + L E +I E + E+ +G P++V + + K G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D+ ++ M++ P V Y++L+ GLC G A +M + G V N T+
Sbjct: 276 LDQGFR-LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR-GLVPNDVTF 333
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L++G C GR + ++ML + P V TYN LI GLC +G EA + EM
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393
Query: 467 QAKLPDISVWSSLVASVCCNTADL 490
+ PD ++ L+ CC DL
Sbjct: 394 RGLKPDKFTYTMLIDG-CCKEGDL 416
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 180/437 (41%), Gaps = 43/437 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI + + +V +QM + CE ++T I +G++NEA L
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL---- 307
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++EM+ L AH +C G + LC
Sbjct: 308 ---------------IREMILHGILPTAH-----TCTGPII------------ALCDMGC 335
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F +M +GC P+ +Y L+ GLC L A L F R+S+ G + V
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL----FHRMSRDGVFPNTV 391
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L + +I+ A +L + R G + + C G D + A ++N
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DPKKAMLVMNN 450
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L RG +L +Y+ + + G ++LD MR G P Y + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + E MV P Y L+ G C A L+ M K+ GC N +TY
Sbjct: 511 MESAFGLFNE-MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM-KRSGCRPNVQTY 568
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL + F A + + M+ +P V TY +I GLC G A+ +MI
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 467 QAKLPDISVWSSLVASV 483
Q LP++ +SSL+ ++
Sbjct: 629 QGCLPNLLTYSSLIRAL 645
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 56/425 (13%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQ 175
+N ++ + K+ + A + + +E + + +L CR+ DL AL VF
Sbjct: 218 YNAVINALCKDGNVADAETIMKKV---FESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR----ISQKGSGEDIVIYRTL 231
+M +GC P+ +Y L+ GLC+ R+NEA L+ M + +G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP-------- 326
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ ALCD G +DA ++ + KG + + C G ++ A L + G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDG 385
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P+ +Y+A+ L RI VL+ M G P++V Y + G +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK-------------------- 391
V+ + +G V YN ++KG CD+GN+ A+ L
Sbjct: 446 LVMNNMLQRGHSANLV-TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 392 --KMSKQV------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
K+SK G N TY L+DG C+D + A+ +LE M P
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD---LNVCR 494
V+TYNVLI GL A + MI + P++ +++++ +C N + L +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 495 KTLEQ 499
K +EQ
Sbjct: 625 KMIEQ 629
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 191/467 (40%), Gaps = 36/467 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I IL E+ RI V++ M + C + I+ Y G +A+ +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLC 162
N+ Q ++NT++K +A IL L G K S L+ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG--CKPDEWSYTELICGFC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A +F EM G P+ +Y L+ G C D +L+ AT LL M + G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM----KRSGCR 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ L Q A ++ + ++ +G+ + C +G A
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS-TSLALE 621
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ N+ + +G +P+L +YS++ L EG++ E + + E+ G P + Y + A
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL--------------------CDAG- 381
G V+ A + M+K PT+ Y +L+KGL C G
Sbjct: 682 MSGKVEHAFNFL-GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740
Query: 382 ----NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AV+VM K G + LV L GR+ EA+ +L M+ + P
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSV--QVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E YN L+ L + A+ + M +Q ++ + L+ ++C
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 28/412 (6%)
Query: 74 DSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + V TA I Y + +L+ A SL +++ + C Q++N L+ + K++
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + + ++D LC+ + LAL +F +M QGC P+ +Y L
Sbjct: 583 GAEEL-CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++ L + ++ EA +L F + + G D + Y ++ A GK++ A L +++
Sbjct: 642 IRALGQEGKVEEAENL----FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR----GGIPSLASYSAMAIDLYN 308
+ G + P + + + K L NE L+ +P + + +
Sbjct: 698 KAGCQ-PTLWTYGVLI------------KGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + L E+ G S+ + A ++ L G EA E++ + +G P
Sbjct: 745 QDAVSVMSAKLAEL-DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQG-LCPDQE 800
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN LL L N +A+ K MS Q GC + Y L+ LC+ R EA E
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQ-GCEVHLNGYKELICALCQLHRRKEARITFEN 859
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML+R++ P VLI GL G + + +L M ++ +P +++ L
Sbjct: 860 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C+ E + S ++ G L +YSA+ I L G M ++G P+
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
L++Y A + AL KDG V +A E I +++ + P Y ++ G C + A+
Sbjct: 215 LLIYNAVINALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M+K+ GC N TY L++GLC GR EA ++ EM++ P T I LC
Sbjct: 274 NQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G +A +M ++ P++ +++L++ +C
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 194/411 (47%), Gaps = 11/411 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
RAGQL+ A +F + + V + S+ ++K + K K++A + L + ++
Sbjct: 197 RAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEM-LAELWRAGLQPT 255
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+LMD LC+ R + A + M+ G P ++ IL+ GL R E +L
Sbjct: 256 VVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQ 315
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M Q G + VIY L+ C +G A+++ ++++ K +K + I
Sbjct: 316 EM----EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 371
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWP 329
C +GE +E A+ ++ + L G ++ + L R +E + +EM T+G P
Sbjct: 372 CKEGE-MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 430
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + A + L K G EA+ + + + KG V + N L+ GLC+ A
Sbjct: 431 NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGV-NLATSNALIHGLCEGKYMKEATKV 489
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
++ M + G + TY I++ G C+D + EA ++ +M R + P + T+N L+ C
Sbjct: 490 IQTMLNK-GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC 548
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
++GK E L++M ++ PDI + +++ C D+ ++ L +L
Sbjct: 549 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG-HCKAKDIRKAKEYLTEL 598
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 198/471 (42%), Gaps = 44/471 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L+ R E+ V+ +M+ + ++ I + R G ++A+ LF +
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ-C 164
++N + K + KE ++E A IL G V + N ++ L Q
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL--FNTVVAWLLQRT 410
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
RR + + + EM +G P+ M+ LC + EA ++++ KG G +
Sbjct: 411 RRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV----GIWFKTLNKGLGVN 466
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ L+ LC+ +++A ++++ +L KG++ S + I + C +E A L
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIEL-DSITYNIMIRGCCKDSKMEEAIKLH 525
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ RG P L +++ + N G++ E +LD+M+T+G P +V Y + K
Sbjct: 526 GDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKA 585
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK--------- 395
+ +A E + E M +G P V +YN L+ G G+ + A+ ++ M
Sbjct: 586 KDIRKAKEYLTELMDRG-LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 644
Query: 396 ---------QVGCVANGET----------------YGILVDGLCRDGRFLEASRVLEEML 430
G V +T Y I++ G C+ G+ +EA EEM
Sbjct: 645 YGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMR 704
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
R P TY L+ G EA +EM+ +PD + +L+A
Sbjct: 705 SRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 755
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR-TKGFWPSLVMYEAKLAALFKDGMVD 348
RG PS+ + +A L G++ +V DEMR ++ + Y A + AL K G VD
Sbjct: 179 RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVD 238
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
E++ E+ + PTV YN+L+ LC +G A LK +Q G + T+GI
Sbjct: 239 AGFEML-AELWRAGLQPTVVTYNVLMDALCKSGRVEEA-FRLKGRMEQGGMTPSVVTFGI 296
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L++GL R RF E VL+EM P YN LI C G +A+ +EM+ +
Sbjct: 297 LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK- 355
Query: 469 KLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
K+ +V +L+A C ++ + LE + S
Sbjct: 356 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLS 389
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 206/462 (44%), Gaps = 19/462 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM--KGDSCECKDSVFA 84
ALK+F E K + Y + L + + ++++D+M G C S+F
Sbjct: 335 ALKLFDEMVSK--GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC--SLFN 390
Query: 85 TAIRTYARA-GQLNEAVSLFKN-LSQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRS 141
+ + + R G+L+ + L + L++F N ++E+ K K E AA I F
Sbjct: 391 SVVAWHLRGTGRLDLVLRLIREMLARFLKPN-DALMTACIQELCKSGKHEEAAEIWF--Q 447
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G + + + N L+ LCQ A V + M G DR +Y+I+++G C +
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
++EA L M R G D+ + L C+ GK+++ + +L+++ +GLK
Sbjct: 508 MDEAIQLRDDMIKR----GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
I C +D+ A + E + G P+ Y+A+ G I + +LD
Sbjct: 564 TYGTIIDGYCK-AKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDT 622
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M+ G P+ V Y + + + G+V+E V + +VK + + Y I+++G C G
Sbjct: 623 MKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIG-YTIIIQGFCKIG 681
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
AVMY K+M + G N TY L+ + G EAS++ +EM+ P +Y
Sbjct: 682 KIDEAVMYFKEMHSR-GIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSY 740
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
N LI G C + + V EM SQ D +++ V +
Sbjct: 741 NTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 196/410 (47%), Gaps = 11/410 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
GQL+ A +F + V ++ ++K + + +++AA + L ++ +
Sbjct: 188 GGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAM-LAELRRSGIQPTV 246
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+LMD LC+ R + A + M P ++ IL+ GL ++ E +L
Sbjct: 247 VTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQE 306
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G + VIY ++ C +G +A+++ ++++ KG+K + I C
Sbjct: 307 M----QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALC 362
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASY-SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+GE +E A+ +++E L+ G + + + S +A L GR+ +++ EM + P+
Sbjct: 363 KEGE-MEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPN 421
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ A + L K G +EA E+ + + KG V V N L+ GLC N A L
Sbjct: 422 DALMTACIQELCKSGKHEEAAEIWFQVLGKGLGV-NVATSNALIHGLCQGNNMKEATKVL 480
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K M G + TY I++ G C+ + EA ++ ++M+ R + P + T+N+ + C+
Sbjct: 481 KAMVNS-GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCN 539
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+GK E + L++M S+ PDI + +++ C D++ + L +L
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY-CKAKDMHKANEYLTEL 588
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 194/448 (43%), Gaps = 35/448 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L+ + E+ V+ +M+G + ++ I + R G +EA+ LF +
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA--------------HILFLRSCYGWEVKSRIQ 152
++N + K + KE ++E A H S W ++
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRG--- 399
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
R DL L + +EM + P+ ++ LC + EA +
Sbjct: 400 -----------TGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI---- 444
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++++ KG G ++ L+ LC +++A ++L+ ++ G++ + + I + C
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRIT-YNIMIQGCC 503
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
++ A L ++ + RG P L +++ N G++ E +LD+M+++G P +V
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K + +A E + E M G P +YN L+ G GN + A+ L
Sbjct: 564 TYGTIIDGYCKAKDMHKANEYLTELMKNG-LRPNAVIYNALIGGYGRNGNISDAIGILDT 622
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M K G TY L+ +C G E V + +++ V Y ++I+G C IG
Sbjct: 623 M-KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIG 681
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
K EAVM+ +EM S+ P+ +++L+
Sbjct: 682 KIDEAVMYFKEMHSRGIPPNKMTYTTLM 709
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + A + E +G P+++ +IL++ L G VA +M +
Sbjct: 154 GSLSRAADAFLELSARGA-SPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVH 212
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY ++ LCR G A +L E+ P V TYNVL+ LC G+ EA M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272
Query: 465 ISQAKLPDISVWSSLVASV 483
+ P I + L++ +
Sbjct: 273 VEGRVRPSIVTFGILISGL 291
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 202/449 (44%), Gaps = 20/449 (4%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
PVY +I +L ES RI + +E ++ G + + + I+ +AG+++ A+SL +
Sbjct: 340 PVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLET 399
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK-----SRIQSLNLLMDV 160
+ + + + L+ E+ K K++ A FL+ G + K S S N L++
Sbjct: 400 MIKRGYCPDMATHSMLINELCKADKIQEAQ-EFLQ---GMDRKISSRSSSCFSYNSLLNS 455
Query: 161 LCQCRRSDLALHVFQEMDFQGCY-PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ ++ A +F M + + PD SY IL+ G C L A L M
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI----DL 511
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
++ Y L L +G+I DA + E+++ G +P + + + +
Sbjct: 512 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC-SPDVITYSTLIHGFSLARKHDQ 570
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L + RG P+ +Y+ + L E + E ++ +M +G P V Y L
Sbjct: 571 AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLY 630
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVG 398
G +++A+EV +E + KG P V YN LLKG AG A + M S+Q
Sbjct: 631 GFCNVGKIEQAVEVFDEMVSKG-HDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ-- 687
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEM-LIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C + ++ I++DGL + R +A V E M P + TYN LI GLC + EA
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ +E+ PD ++ L+ ++ C
Sbjct: 748 MKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 191/448 (42%), Gaps = 38/448 (8%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF-----KNLSQFNCVN 113
++ E ++ M C+ ++++ + + + L+EA LF ++ + N V
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307
Query: 114 WTQSFNTLLKEMVKESKLEA-------------AHILFLR-------------SCY---G 144
WT + L K E EA + + +R +C G
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ + + ++ LC+ R D AL + + M +G PD ++ +L+ LC ++ E
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L M +IS + S Y +LL +LC K+ A I ++ + P +
Sbjct: 428 AQEFLQGMDRKISSRSS--SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ A+ L + + +P++ +Y+A L +GRI + V +EM
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P ++ Y + D+A E+ E + +G P YN LL GLC
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC-RPNAVTYNCLLHGLCKESKPD 604
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A +KM ++ GC + TY L+ G C G+ +A V +EM+ + + P V YN L
Sbjct: 605 EAHELFRKMVER-GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPD 472
++G GK EA + M+S+ PD
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPD 691
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 205/509 (40%), Gaps = 48/509 (9%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG 73
+ +IK + AL F+ + + N++H+ Y ++ L + + +V ++M
Sbjct: 100 VGAVIKHLRDGGEALTFFRWLQAR--NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA 157
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
+A +++ +EAV F + + +TL +++ + K
Sbjct: 158 QGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVD----KGFKPSSTLYQKVTECLKATG 213
Query: 134 AHILFLRSCYGWEVKSRIQ-----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
F R +G +++ R+ LL++ + Q + + A +F+ M GC PD
Sbjct: 214 KEGEFSR-VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATI 271
Query: 189 YHILMKGLCNDRRLNEATHLLYSMF-----------W--------------------RIS 217
Y ++ C L+EA L M W R
Sbjct: 272 YSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM 331
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
Q+ +Y L+ L + G+I A + +I + ++ H + C G +
Sbjct: 332 QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGR-V 390
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK--GFWPSLVMYE 335
+ A SL+ + RG P +A++S + +L +I E + L M K S Y
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYN 450
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L +L K V +A + + + +FVP V Y+IL+ G C A K+M
Sbjct: 451 SLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI- 509
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ CV N TY ++GL R GR +A V EEM+ P V TY+ LI G K
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A E MIS+ P+ ++ L+ +C
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLC 598
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 202/451 (44%), Gaps = 20/451 (4%)
Query: 40 NYRHNGPVYASMIGILSESNR--ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+ NG +Y+S E + E++ V+ + G S C+++V A+ + R G
Sbjct: 57 GFSRNGAIYSSQKKQQQEQQQRGFLELEVVVKKWDGKS-SCRETV--GAVIKHLRDG--G 111
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA++ F+ L N + ++N LL ++++ L+ A +F + V + + +L
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGF-TYAVL 170
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ C R SD A+ F EM +G P Y + + L + E + + F R
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRV----FGRDL 226
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+K ++++ + LL Q K +A ++ +++ G K + + L C E++
Sbjct: 227 EKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKL-ENL 285
Query: 278 EGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A L E + P + +++A L G+I + + M+ + S +Y+
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDM 344
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L + G +D+A E E + P+ + +++ LC AG A+ L+ M K+
Sbjct: 345 LIRLLIESGRIDKAEEACLE-IAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 403
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEM--LIRSYWPCVETYNVLIRGLCSIGKQ 454
C + T+ +L++ LC+ + EA L+ M I S +YN L+ LC K
Sbjct: 404 GYC-PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 455 YEAVMWLEEMISQ-AKLPDISVWSSLVASVC 484
++A M+S+ + +PD+ +S L+ C
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFC 493
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L + K+ P A ++F++ E+ + + Y +++ +I +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD--PDRVTYTTLLYGFCNVGKIEQAV 642
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV D+M + + ++ + RAG+ EA LF+ + C T S N ++ +
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +L+ A +F R + + N L+ LC +R A+ VF+E+D PD
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Query: 186 RESYHILMKGL 196
++++L++ +
Sbjct: 763 PHAFNVLLEAI 773
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ + L + + +V ++M +G P+ Y + + + DEA+ E
Sbjct: 131 TYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGE- 189
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSA-VAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
MV F P+ +Y + + L G + ++ + + K+V V +LV+ + +D
Sbjct: 190 MVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA-VEMMLKKALLVNFVIQD 248
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV- 475
+ +EAS++ M+ P Y+ ++ C + EA EM ++K P +V
Sbjct: 249 -KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307
Query: 476 WSSLVASVCCN---TADLNVCRKTLEQLSS 502
W++ ++ +C + CR E LSS
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSS 337
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 11/304 (3%)
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD ++ LM GLC + R+ +A L+ M Q Y T++ LC G
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP--------YGTIINGLCKMGD 56
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ A+ +L K+ +KA + I C DG I A++L E +G P + +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYS 115
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M GR + +++L +M + P +V + A + AL K+G V EA E+ + + +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G F PT YN ++ G C A L M+ + C + T+ L++G C+ R
Sbjct: 176 GIF-PTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVD 233
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ EM R TY LI G C +G A L MIS P+ + S++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 481 ASVC 484
AS+C
Sbjct: 294 ASLC 297
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 47/348 (13%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F T + G++ +A++L + + Q + T++ + K E+A + L
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVE----EGHQPYGTIINGLCKMGDTESA-LNLLSK 66
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K+ + N ++D LC+ A ++F EM +G +PD +Y ++ C R
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A LL M R D+V + L+ AL +GK+ +A +I +LR+G+
Sbjct: 127 WTDAEQLLRDMIER----QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI----- 177
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P+ +Y++M + R+ + ++LD
Sbjct: 178 -------------------------------FPTTITYNSMIDGFCKQDRLNDAKRMLDS 206
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +K P +V + + K VD +E+ E +G TV Y L+ G C G
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVG 265
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ A L M G N T+ ++ LC +A +LE++
Sbjct: 266 DLDAAQDLLNVMISS-GVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC + T+ L++GLC +GR L+A +++ M+ + P Y +I GLC +G
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
A+ L +M + ++++++ +C
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLC 87
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 33 EAKEKYPNYRHNG--PV---YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA+E Y + G P Y SMI + +R+ + K ++D M SC F+T I
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
Y +A +++ + +F + + V T ++ TL+ + L+AA L
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 7/338 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + N+LM + + + A ++F EM +G P +++ LM G+C LN A
Sbjct: 240 VPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSAN 299
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M ++ G D+ Y + LC G+IQDA+++ E++ +G+ +
Sbjct: 300 ALRGLM----AKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTL 355
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C +G ++ L E RG L +Y+A+A L + + +++EMR G
Sbjct: 356 IDAHCKEG-NVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P V Y + K+G +D A+E+ +E +G + V Y L+ GL +G S +
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEV-TYTTLISGLSKSGRSVDS 473
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L +M + G + TY +++D C++ ++L+EM + P V TYNV++
Sbjct: 474 ERILCEM-MEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMN 532
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C +G+ A M L M++ PD ++ L+ C
Sbjct: 533 GFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHC 570
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 39/403 (9%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVK 148
R + EA + + L + FN L+++M++ KL +A +F LR V
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRG----VP 276
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + N LM +C+ + A + M G PD +Y M+GLC R+ +A
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVE- 335
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
MF + ++G + V++ TL+ A C +G + +++ ++ +G+K DL
Sbjct: 336 ---MFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKT--------DL 384
Query: 269 CPCN---DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
N +G D++ A ++ E G P +Y+ + EG + ++ E
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE 444
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G V Y ++ L K G ++ E I EM++ P Y +++ C
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDS-ERILCEMMEAGLEPDNTTYTMVIDAFCKNS 503
Query: 382 NSAVAVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ LK+M ++ G V TY ++++G C G+ A +L ML P
Sbjct: 504 DVKTGFKLLKEMQNKGRKPGVV----TYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDD 559
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMIS-QAKLPDISVWSSLV 480
TYN+L+ G C GK +A EE+ S + + D +++SL+
Sbjct: 560 ITYNILLDGHCKHGKVRDA----EELKSAKGMVSDFGLYTSLI 598
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 150/341 (43%), Gaps = 10/341 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL-FLRS 141
F +R R+G+L A ++F + + +FNTL+ M K S L +A+ L L +
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G V + + M LC+ R A+ +F+EM +G P+ + L+ C +
Sbjct: 307 KAG--VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ L M R G D+V Y L LC ++ A I+E++ GLK K
Sbjct: 365 VAAGLELHREMATR----GIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV 420
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +GE ++ A + E G +Y+ + L GR V+ +++L E
Sbjct: 421 TYTTLIDGFCKEGE-LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCE 479
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P Y + A K+ V ++++E KG P V YN+++ G C G
Sbjct: 480 MMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR-KPGVVTYNVVMNGFCILG 538
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
A M L M +G + TY IL+DG C+ G+ +A
Sbjct: 539 QMKNADMLLNAM-LNIGVCPDDITYNILLDGHCKHGKVRDA 578
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--D 267
Y+ + ++ G + + L+ + GK+ A + +++LR+G+ + +
Sbjct: 229 YAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSG 288
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+C +D + L+ +A G P + +Y A L GRI + ++ +EMR +G
Sbjct: 289 MCKASDLNSANALRGLMAKA---GVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGV 345
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ V++ + A K+G V LE+ E +G V YN L GLC + A
Sbjct: 346 NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLV-AYNALANGLCRVRDLKAAN 404
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+++M + G + TY L+DG C++G A + +EM TY LI G
Sbjct: 405 DIVEEM-RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
L G+ ++ L EM+ PD + ++ ++ + C N+ D+ K L+++ +
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNS-DVKTGFKLLKEMQN 517
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 60 RITEMK---EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
R+ ++K +++++M+ + + + T I + + G+L+ A+ + + +S
Sbjct: 396 RVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEV 455
Query: 117 SFNTLLKEMVKESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
++ TL+ + K + +++ IL G E + + +++D C+ + +
Sbjct: 456 TYTTLISGLSKSGRSVDSERILCEMMEAGLEPDN--TTYTMVIDAFCKNSDVKTGFKLLK 513
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
EM +G P +Y+++M G C ++ A LL +M G D + Y LL
Sbjct: 514 EMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAML----NIGVCPDDITYNILLDGH 569
Query: 236 CDQGKIQDAMQI 247
C GK++DA ++
Sbjct: 570 CKHGKVRDAEEL 581
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 183/394 (46%), Gaps = 15/394 (3%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
++ A+S F + + T FN LL + K K + + + + I +L+
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAK-MKHHSTLLSLSHQMDSFGIPPNIYTLH 100
Query: 156 LLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+L++ C R + ALH+F +M +G PD +Y L+ GLC + A LL SM
Sbjct: 101 ILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 160
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
QK ++ Y T++ +LC ++ +A + +++ KG+ + + CN
Sbjct: 161 ----QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 216
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSLV 332
E + +L+NE + +P + S++ + L EG++ E V+D+M +G P+++
Sbjct: 217 CE-WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVI 275
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K +D+A+ + E M + +P Y+ L+ GLC A+ +
Sbjct: 276 SYNTLINGYCKIQRIDKAMYLFGE-MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 334
Query: 393 MSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M V C + N TY IL+D LC++ EA +L+ + + P ++ N+ I G+C
Sbjct: 335 M---VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ A + S+ PD+ +S ++ +C
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 425
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 183/388 (47%), Gaps = 9/388 (2%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G++ EA+ LF + ++ TL+ + K AA I L S + + +
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA-IRLLGSMVQKNCQPNVFA 170
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N ++D LC+ R+ A ++F EM +G PD +Y+ L+ LCN L E H+ ++
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN---LCEWKHV-ATLL 226
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ D+V + T++ ALC +GK+ +A +++K++++G P + +
Sbjct: 227 NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCK 286
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ I+ A L E + IP +YS + L + R+ + + EM P+LV
Sbjct: 287 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 346
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y L L K+ + EA+ +++ ++G+ + P ++V NI + G+C AG A
Sbjct: 347 YRILLDYLCKNRYLAEAMALLKA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+S + G + TY I+++GLCR G EAS++ EM YN + RG
Sbjct: 405 LSSK-GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ A+ L+EM+++ D S + V
Sbjct: 464 ETSRAIQLLQEMVARGFSADASTMTLFV 491
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 45/336 (13%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC--NDRRLNEATHLLYS 211
N L+ + + + L + +MD G P+ + HIL+ C N ++ EA HL
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHL--- 120
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F ++ +G D+V Y TL+ LC G A+++L +++K +
Sbjct: 121 -FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ-------------- 165
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
P++ +Y+ + L + ++ E + EM TKG P +
Sbjct: 166 ----------------------PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 203
Query: 332 VMYEAKLAALFKDGMVD-EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
Y + + AL + + + + + EMV +P V +N ++ LC G A +
Sbjct: 204 FTYNSLIHALCN--LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 261
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KM ++ GC+ N +Y L++G C+ R +A + EM + P TY+ LI GLC
Sbjct: 262 DKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 321
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ + +A+ EM++ +++P++ + L+ +C N
Sbjct: 322 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 357
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 181/424 (42%), Gaps = 26/424 (6%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+I E + D+M G+ + T I + G + A+ L ++ Q NC ++N
Sbjct: 113 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 172
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ-CRRSDLALHVFQEMD 178
T++ + K+ ++ A LF + I + N L+ LC C +A + EM
Sbjct: 173 TIIDSLCKDRQVTEAFNLF-SEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT-LLNEMV 230
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
PD S++ ++ LC + ++ EA ++ M I + G +++ Y TL+ C
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM---IQRGGCMPNVISYNTLINGYCKI 287
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+I AM + ++ R+ L P + + + E ++ A +L +E + IP+L +
Sbjct: 288 QRIDKAMYLFGEMCRQEL-IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 346
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y + L + E +L + P + + + + + G ++ A ++
Sbjct: 347 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 406
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG P V Y+I++ GLC G A ++M + GC NG Y + G R+
Sbjct: 407 SKG-LQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN-GCTLNGCIYNTITRGFLRNNE 464
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG-----KQ------------YEAVMWL 461
A ++L+EM+ R + T + ++ L G KQ YE VM L
Sbjct: 465 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMVL 524
Query: 462 EEMI 465
+E+I
Sbjct: 525 QEII 528
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 10/392 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K + A+++ +K N + N Y ++I L + ++TE
Sbjct: 131 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK--NCQPNVFAYNTIIDSLCKDRQVTEAF 188
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M + + I + +L + + SFNT++ +
Sbjct: 189 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 248
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE K+ AH + + + S N L++ C+ +R D A+++F EM Q PD
Sbjct: 249 CKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 308
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y L+ GLC+ RL +A L + M SQ ++V YR LL LC + +AM
Sbjct: 309 TVTYSTLIHGLCHVERLQDAIALFHEMV-ACSQI---PNLVTYRILLDYLCKNRYLAEAM 364
Query: 246 QILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+L+ I L P + + I + C GE +E A+ L + +G P + +YS M
Sbjct: 365 ALLKAIEGSNLD-PDIQVNNIAIDGMCRAGE-LEAARDLFSNLSSKGLQPDVWTYSIMIN 422
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L G + E K+ EM G + +Y ++ A+++++E + +G F
Sbjct: 423 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG-FS 481
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ +K L D G L+ KQ
Sbjct: 482 ADASTMTLFVKMLSDDGLDQSLKQILRDFCKQ 513
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 182/404 (45%), Gaps = 13/404 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F I Y + G LNEAVS+F + N+L K+++K +++E LF +
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVE----LFWKVY 221
Query: 143 YGW--EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + + L++ C+ + + HV +M+ +GC P+ +Y +++ GLC
Sbjct: 222 KGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG 281
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++EA L SM + KG D IY TL+ C Q + + +L+++ GLK P
Sbjct: 282 DVDEALELKRSM----ANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLK-PD 336
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + DI GA + E R + +Y A+ L G + + + +
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM G P + Y + +K +++A E++ E+ K + ++ GLC
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELL-IEIKKENLTANAYMCGAIVNGLCHC 455
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G+ A ++M G N Y +V GL ++GRF EA ++L M + P V
Sbjct: 456 GDLTRANELFQEMISW-GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC 514
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN +I G C GK E +L EMI++ P++ + + + C
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 193/442 (43%), Gaps = 16/442 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I ++ E K V+ M+ C ++ I RAG ++EA+ L +++
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + + TL+ ++ + + L Y +K + L++ ++
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKSM-LDEMYTMGLKPDHVAYTALINGFV--KQ 350
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
SD+ A V +EM + + +Y+ L+ GLC L +A L F ++ G D
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL----FSEMTMMGIKPD 406
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKS 282
I Y L+ ++ A ++L +I ++ L A I LC C D + A
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD---LTRANE 463
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L E + G P++ Y+ + L EGR E K+L M+ +G P + Y +
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G ++E + E + KG P V Y + G C AG A +M G N
Sbjct: 524 KAGKMEEGKSYLVEMIAKG-LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPN 581
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
L+DG C+DG +A ML + P V+T++VLI GL GK EA+
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641
Query: 463 EMISQAKLPDISVWSSLVASVC 484
E++ + +PD+ ++SL++++C
Sbjct: 642 ELLDKGLVPDVFTYTSLISNLC 663
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 198/497 (39%), Gaps = 88/497 (17%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK------------------------GDSCECKDSV 82
+YA++I R TE K ++D+M G + + K+ +
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM 363
Query: 83 FATAIR----TY-------ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
FA I+ TY + G L +A LF ++ Q++N L++ K +
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLM-----DVLCQCRRSDLALHVFQEMDFQGCYPDR 186
E A+ L + E+K + N M + LC C A +FQEM G P+
Sbjct: 424 EKAYELLI------EIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y ++KGL + R EA +L M +G D+ Y T++ C GK+++
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVM----KDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533
Query: 247 ILEKILRKGLK---------------------APKSRRHRID--LCP------------C 271
L +++ KGLK A +S +D + P C
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
DG + A + L +G +P + ++S + L G++ E V E+ KG P +
Sbjct: 594 KDGNTTK-AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y + ++ L K+G + A E + ++M K P + YN L+ GLC G A A
Sbjct: 653 FTYTSLISNLCKEGDLKAAFE-LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+ ++ G N TY ++ G C+ EA ++ M + P Y LI G C
Sbjct: 712 GIPEK-GLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA 770
Query: 452 GKQYEAVMWLEEMISQA 468
G +A+ M+ +
Sbjct: 771 GNTEKALSLFLGMVEEG 787
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 188/438 (42%), Gaps = 8/438 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L + + E E+ M + ++AT I + R + E S+ +
Sbjct: 269 TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM 328
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L+ VK+S + A + + ++K + L+ LC+
Sbjct: 329 YTMGLKPDHVAYTALINGFVKQSDIGGAFQV-KEEMFARKIKLNTFTYYALIHGLCKIGD 387
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F EM G PD ++Y+ L++G + + +A Y + I ++ +
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKA----YELLIEIKKENLTANAY 443
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ ++ LC G + A ++ ++++ GLK I +G E A ++
Sbjct: 444 MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR-FEEAIKILGV 502
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P + Y+ + I G++ EG L EM KG P++ Y A + + G
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A E EM+ P + L+ G C GN+ A + M Q G + + +T+
Sbjct: 563 M-QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ-GVLPDVQTH 620
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL ++G+ EA V E+L + P V TY LI LC G A ++M
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680
Query: 467 QAKLPDISVWSSLVASVC 484
+ P+I +++L+ +C
Sbjct: 681 KGINPNIVTYNALINGLC 698
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 187/439 (42%), Gaps = 9/439 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y +++ L + R E +++ MK + T I + +AG++ E S
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ ++ + + +++AA F+ + + +L+ D
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI-DGY 592
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A F+ M QG PD +++ +L+ GL + +L EA +F + KG
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM----GVFSELLDKGL 648
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+ Y +L+ LC +G ++ A ++ + + +KG+ + + C GE I A+
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE-IAKAR 707
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L + +G + +YS + + E ++ M+ G P +Y A +
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++AL + + +G + + +N L+ G G A ++ M
Sbjct: 768 CKAGNTEKALSLFLGMVEEG--IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN-HITP 824
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N TY IL++ C G EA ++ EM R+ P V TY L+ G IG++ E
Sbjct: 825 NHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLF 884
Query: 462 EEMISQAKLPDISVWSSLV 480
+EM+++ PD WS +V
Sbjct: 885 DEMVARGIKPDDLAWSVMV 903
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 176/408 (43%), Gaps = 16/408 (3%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
D + I Y + G +A + F+ + + Q+ + L+ + K KL+ A +F
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLC 197
V +L+ ++ C+ DL A + +M +G P+ +Y+ L+ GLC
Sbjct: 642 ELLDKGLVPDVFTYTSLISNL---CKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLC 698
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +A L F I +KG + V Y T++ C + +A Q+ + G+
Sbjct: 699 KLGEIAKAREL----FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV- 753
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P S + + C + E A SL ++ GI S +++A+ + G+++E +
Sbjct: 754 PPDSFVYCALIDGCCKAGNTEKALSLF-LGMVEEGIASTPAFNALIDGFFKLGKLIEAYQ 812
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++++M P+ V Y + G + EA E + EM K +P V Y LL G
Sbjct: 813 LVEDMVDNHITPNHVTYTILIEYHCTVGNIKEA-EQLFMEMQKRNVMPNVLTYTSLLHGY 871
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G + +M + G + + ++VD ++G +++A +++++ML C
Sbjct: 872 NRIGRRSEMFSLFDEMVAR-GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVC 930
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
Y +LI LC E + L+E+ Q ++ +L VCC
Sbjct: 931 KNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTL---VCC 975
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 163/380 (42%), Gaps = 11/380 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ G+L EA+ +F L V ++ +L+ + KE L+AA L C
Sbjct: 624 IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG- 682
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ I + N L++ LC+ A +F + +G + +Y ++ G C L EA
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L + M G D +Y L+ C G + A+ + ++ +G+ + + I
Sbjct: 743 QLFHGM----KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALI 798
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
D G+ IE A L+ + + P+ +Y+ + G I E +++ EM+ +
Sbjct: 799 D-GFFKLGKLIE-AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+++ Y + L + G E + +E + +G P +++++ GN A
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG-IKPDDLAWSVMVDAHLKEGNWIKA 915
Query: 387 VMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ + M S+ V N Y IL+D LC+ E +VL+E+ + + T L+
Sbjct: 916 LKLVDDMLSEGVNVCKN--LYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV 973
Query: 446 RGLCSIGKQYEAVMWLEEMI 465
G+ EA+ LE M+
Sbjct: 974 CCFHRAGRTDEALRVLESMV 993
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 13/319 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K A ++F EK N Y+++I +S +TE
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEK--GLARNSVTYSTIIAGYCKSANLTEAF 742
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ MK V+ I +AG +A+SLF + + + T +FN L+
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE-EGIASTPAFNALIDGF 801
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K KL A+ L + + + +L++ C A +F EM + P+
Sbjct: 802 FKLGKLIEAYQL-VEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN 860
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y L+ G R +E ++S+F + +G D + + ++ A +G A+
Sbjct: 861 VLTYTSLLHGYNRIGRRSE----MFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916
Query: 246 QILEKILRKGLKAPKSRRH-RID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
++++ +L +G+ K+ ID LC N+ ++ +++E +G SLA+ +
Sbjct: 917 KLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEV---LKVLDEVEKQGSKLSLATCGTLV 973
Query: 304 IDLYNEGRIVEGDKVLDEM 322
+ GR E +VL+ M
Sbjct: 974 CCFHRAGRTDEALRVLESM 992
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 201/476 (42%), Gaps = 12/476 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMI-GILSESNRITEM 64
P T T L KQK A IF+ N N Y ++I G + E N I E
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN--PNRFTYTALIDGFIKEGN-IEEA 365
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ D+M + + I A+AG++ +A+SLF + T ++N L+
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+K + A L L ++ + ++L+ LC A V +M G P
Sbjct: 426 YLKSHDMAKACEL-LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ Y L+K + R A LL M G D+ Y L+ LC K+++A
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMI----ANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+L + KG+K P + + + + +I+ A+ + L G +P+ Y+ +
Sbjct: 541 KMLLVDMGEKGIK-PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 599
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ G VE M KG P + Y A + +L K+G EA+ V + + G V
Sbjct: 600 GHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV-V 658
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V +YN L+ G C G+ A +M G N Y L++GLC+ G +A
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHN-GINPNIVVYNTLINGLCKLGEVTKARE 717
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +E+ + P V TY+ +I G C G EA +EMIS+ PD ++ L+
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 205/446 (45%), Gaps = 18/446 (4%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y + I + S+S I + M + ++ I+ + G EA+S
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
FK + + + ++++ ++ + K K + A +FL+ V + N L+
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD-VFLYNSLISGF 671
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + A ++ EM G P+ Y+ L+ GLC +L E T +F I +K
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC---KLGEVTKA-RELFDEIEEKDL 727
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D+V Y T++ C G + +A ++ ++++ KG+ +P + I + C ++E A
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI-SPDGYIYCILIDGCGKEGNLEKAL 786
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL +EA + + SL++++++ G+++E ++ D+M K P++V Y + A
Sbjct: 787 SLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K M++EA E + +M +P Y LL GN + K M + G
Sbjct: 846 GKAEMMEEA-EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR-GIAC 903
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ YG++ C++G+ LEA ++L + L+ + ++ LI LC KQ V+
Sbjct: 904 DAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCK-EKQISTVL-- 960
Query: 462 EEMISQAKLPDISVWSSLVASVCCNT 487
E++S+ ++S ++S CNT
Sbjct: 961 -ELLSEMGKEELS-----LSSKTCNT 980
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 164/375 (43%), Gaps = 40/375 (10%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
E K + + N + LCQ D AL V + M +G PD +Y +L+ G C +R EA
Sbjct: 271 ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-------- 257
+ SM G + Y L+ +G I++A++I ++++ +GLK
Sbjct: 331 KLIFESM----PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386
Query: 258 --------------------------APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
P + + + + D+ A L+ E R
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
PS +YS + L + + + ++VLD+M G P++ MY + A ++ + A+
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E++ + M+ +P + YN L+ GLC A A M L M ++ G N TYG ++
Sbjct: 507 ELL-KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAHTYGAFIN 564
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ G A R ++ML P Y +LI+G C +G EA+ + M+ + +P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624
Query: 472 DISVWSSLVASVCCN 486
DI +S+++ S+ N
Sbjct: 625 DIRAYSAIIHSLSKN 639
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 203/490 (41%), Gaps = 42/490 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + IG L ++ + E EV M + + + + + EA +F+++
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L+ +KE +E A + +K + + N ++ + +
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEA-LRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ +F EM G PD +Y++L+ G + +A LL M R
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP----F 452
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LC +Q A ++L++++R G+K P + + E A L+
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVK-PNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G +P L Y+ + I L ++ E +L +M KG P+ Y A + K G
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK--------------- 391
+ A E ++M+ VP +Y IL+KG CD GN+ A+ K
Sbjct: 572 IQVA-ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 392 ----KMSK---------------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+SK + G V + Y L+ G C++G +AS++ +EML
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
P + YN LI GLC +G+ +A +E+ + +PD+ +S+++ C + +L
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY-CKSGNLTE 749
Query: 493 CRKTLEQLSS 502
K +++ S
Sbjct: 750 AFKLFDEMIS 759
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 199/470 (42%), Gaps = 38/470 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L S+ + + EV+DQM + + ++ T I+ Y + + A+ L K +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +N L+ + + K+E A +L + +K + +++ +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGE 571
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA-------------------TH 207
+A F++M G P+ Y IL+KG C+ EA +
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 208 LLYSM------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+++S+ F + + G D+ +Y +L+ C +G I+ A Q+ +++L G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVE 314
+ + + C GE + A+ L +E + +P + +YS + ID Y G + E
Sbjct: 692 INPNIVVYNTLINGLCKLGE-VTKARELFDEIEEKDLVPDVVTYSTI-IDGYCKSGNLTE 749
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K+ DEM +KG P +Y + K+G +++AL + E K V ++ +N L+
Sbjct: 750 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS--VGSLSAFNSLI 807
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
C G A M + N TY IL+D + EA ++ +M R+
Sbjct: 808 DSFCKHGKVIEARELFDDMVDK-KLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY L+ IG +++ + ++M ++ D + + ++ C
Sbjct: 867 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 170/383 (44%), Gaps = 46/383 (12%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
++ I + ++ G+ EA+ +F + V +N+L+ KE +E A L+
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + I N L++ LC+ A +F E++ + PD +Y ++ G C L
Sbjct: 689 HNG-INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA + +F + KG D IY L+ +G ++ A+ + + +K + + +
Sbjct: 748 TEA----FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 803
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDE 321
ID C G+ IE A+ L ++ + + P++ +Y+ + ID Y + ++E +++ +
Sbjct: 804 NSLID-SFCKHGKVIE-ARELFDDMVDKKLTPNIVTYTIL-IDAYGKAEMMEEAEQLFLD 860
Query: 322 MRTKGFWPSLVMYEA------------KLAALFKD-----------------------GM 346
M T+ P+ + Y + K+ +LFKD G
Sbjct: 861 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
EAL+++ + +V+G + V++ L+ LC + + L +M K+ +++ +T
Sbjct: 921 SLEALKLLNKSLVEGIKLED-DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS-KTC 978
Query: 407 GILVDGLCRDGRFLEASRVLEEM 429
L+ G + G EAS+VL M
Sbjct: 979 NTLLLGFYKSGNEDEASKVLGVM 1001
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 186 RESYHILMKGLCNDRRLN--------------EATHLLYSMFWRISQKGSGEDIVIYRTL 231
R+ + IL+ N R+LN ++ L +W S+ + + + Y L
Sbjct: 67 RKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSIL 126
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR- 290
LC+ G I A +LEK+L+ +R+ +++ ++L+R
Sbjct: 127 AIRLCNSGLIHQADNMLEKLLQ-------TRKPPLEIL----------------DSLVRC 163
Query: 291 ----GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
GG +L + G + E V ++GF+P+L+ + L K M
Sbjct: 164 YREFGG-SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM 222
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +V MV+ VP V Y ++K C G+ M L +M K+ C N TY
Sbjct: 223 MGLFWKVYGS-MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE--CKPNLFTY 279
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+ GLC+ G EA V + M+ + P TY +L+ G C + EA + E M S
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339
Query: 467 QAKLPDISVWSSLV 480
P+ +++L+
Sbjct: 340 SGLNPNRFTYTALI 353
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 197/441 (44%), Gaps = 14/441 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y S+I L ++ + + + ++ QM G+ + + + T I Y+ GQ +AV +F
Sbjct: 245 NVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMF 304
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDV 160
K ++ + T + +T + + K ++E A F L + + S L+
Sbjct: 305 KEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATA 364
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C S+L F M G P++ ++IL+ G + EA + F + ++G
Sbjct: 365 GCLVDMSNL----FNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI----FEDMQKRG 416
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D++ Y ++ A C G + DAM ++ KG++ + + C G D+ A
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHG-DLVKA 475
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ L+ E +G P + S++++ L EGR+ E ++ D + G + ++ + +
Sbjct: 476 EELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDG 535
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
G + EA V + MV P + Y L+ G C G ++ +++ + G
Sbjct: 536 YCLIGKMSEAFRV-HDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHK-GVK 593
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
TYGI++DGL GR A + +EM+ + TY++L+ GLC EA+
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653
Query: 461 LEEMISQAKLPDISVWSSLVA 481
+++ + DI + + +++
Sbjct: 654 FQKLCAMNVKFDIVILNIMIS 674
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 208/494 (42%), Gaps = 45/494 (9%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++FKE + N ++ + L + RI E +E D M + ++T
Sbjct: 300 AVRMFKEMTSR--GVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTL 357
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ YA AG L + +LF + + V FN L+ K + A +F
Sbjct: 358 LHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIF-EDMQKRG 416
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + ++ C+ D A+ F M +G P+ Y L++G C L +A
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+Y I KG G I+ + +L+ LC +G++ +A +I + I+R G KA + +
Sbjct: 477 ELVY----EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
C G+ E + +++A++ GI P + +Y + GRI +G + E+ K
Sbjct: 533 IDGYCLIGKMSEAFR--VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHK 590
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P+ Y L LF G A E+ +E M++ T+ Y+ILL GLC +
Sbjct: 591 GVKPTTFTYGIILDGLFHAGRTAAAKEMFQE-MIESGIAVTIPTYSILLTGLCRNNCTEE 649
Query: 386 AVMYLKKM----------------SKQV------------------GCVANGETYGILVD 411
A+ +K+ SK G V +TY I+++
Sbjct: 650 AITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMME 709
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
L ++G EA V ML P NV++R L G+ +A +++ + ++ L
Sbjct: 710 NLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILF 769
Query: 472 DISVWSSLVASVCC 485
+ S S L++ C
Sbjct: 770 EASTASMLLSLFSC 783
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + ++L+D C+ RR DLA F + QG D L++GLC+ +R +EA +L
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVL- 161
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
F R+ + G D + Y T+L ++CD G+ Q A+ IL +++G CP
Sbjct: 162 --FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG-----------GGCP 208
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
CN + YS + L+ EG++ E + EM +G P+
Sbjct: 209 CN-----------------------VVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPN 245
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + AL K VD+A + I +MV P YN L+ G G AV
Sbjct: 246 VVTYNSVIHALCKARAVDKA-QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMF 304
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K+M+ + G + N T V LC+ GR EA + ML + + + +Y+ L+ G +
Sbjct: 305 KEMTSR-GVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYAT 363
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G + M+ +P+ V++ LV
Sbjct: 364 AGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 179/422 (42%), Gaps = 57/422 (13%)
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
+G C C V++T + + G++ EA LF ++Q
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQ----------------------- 239
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
V + + N ++ LC+ R D A + ++M G PD +Y+
Sbjct: 240 -------------QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT 286
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ G + +A MF ++ +G + V T + LC G+I++A + + +
Sbjct: 287 LIHGYSTLGQWKQAVR----MFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342
Query: 252 LRKGLK----APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L KG K + + H C + +L N + G +P+ ++ +
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGC-----LVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G + E + ++M+ +G P ++ Y A + A + G +D+A++ + KG P
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV-EPNF 456
Query: 368 RVYNILLKGLCDAGN--SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
VY L++G C G+ A ++Y + C+ ++ L++ LC++GR EA R+
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCIL---SFASLINHLCKEGRVFEAQRI 513
Query: 426 LEEMLIRSYWPC-VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+M+IR+ V + LI G C IGK EA + M+S PDI + +LV C
Sbjct: 514 F-DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCC 572
Query: 485 CN 486
N
Sbjct: 573 KN 574
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V V + LL+GLCDA + AV L ++GCV + +Y ++ +C DGR A +L
Sbjct: 138 VIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL 197
Query: 427 EEMLIRSYWPC---VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
M ++ C V Y+ ++ GL GK EA EM Q P++ ++S++ ++
Sbjct: 198 -RMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHAL 256
Query: 484 C 484
C
Sbjct: 257 C 257
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 205/504 (40%), Gaps = 43/504 (8%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
FK+ E Y +G Y ++I L +S R E K ++D+M + V+A I +
Sbjct: 301 FKKDMEDY-GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R G +EA + K + +++ L++ + K +++ A +L +
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + NL+++ + A + EM+ G P+ +Y I++ GLC +A+ LL
Sbjct: 420 I-TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + KG + +Y L+ C +G + A +I +K+ + + P + +
Sbjct: 479 EM----TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV-LPDLYCYNSLIFG 533
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ +E + + RG +P+ +YS + G + ++++ M G P+
Sbjct: 534 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF--------------------------- 363
V+Y L + FK +++ + + +G
Sbjct: 594 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 653
Query: 364 -------VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
VP V VY+ L+ GLC + A L +MSK+ G N Y L+DGLC+
Sbjct: 654 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKS 712
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G A V +L + P TY LI G C +G A EM++ PD V+
Sbjct: 713 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772
Query: 477 SSLVASVCCNTADLNVCRKTLEQL 500
S L C + DL +E++
Sbjct: 773 SVLTTG-CSSAGDLEQAMFLIEEM 795
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I+ N L+ L + L V + M G PD +Y L++ C R + A +L
Sbjct: 209 IRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLV 268
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M ++G G + V Y L+ LC G +++A G K
Sbjct: 269 EM----RERGCGLNTVTYNVLIAGLCRSGAVEEAF---------GFK------------- 302
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
D ED G +P +Y A+ L R E +LDEM P+
Sbjct: 303 -KDMEDY-------------GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V+Y + ++G DEA ++I+E MV P Y+ L++GLC G A + L
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKE-MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 407
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K+M + + TY ++++G R +A R+L EM P V TY+++I GLC
Sbjct: 408 KQMVRD-SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ +A LEEM ++ P+ V++ L++ C
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 179/418 (42%), Gaps = 18/418 (4%)
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I + DS +V + TY ++G++ +A + + + N LLK++++
Sbjct: 162 IHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR 221
Query: 128 ESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+ A + +R G + + + + L++ C+ R D A V EM +GC +
Sbjct: 222 ADAM--ALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 279
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y++L+ GLC + EA + + G D Y L+ LC + +A
Sbjct: 280 VTYNVLIAGLCRSGAVEEA----FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKA 335
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAM 302
+L+++ LK + + DG EG A +I E + G P+ +Y +
Sbjct: 336 LLDEMSCAELKP-----NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 390
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L G++ +L +M P + Y + F+ +A ++ EM
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL-SEMENAG 449
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P V Y+I++ GLC +G A L++M+ + G N Y L+ G CR+G A
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLA 508
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++M + P + YN LI GL +G+ E+ + +M + LP+ +S L+
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 198/461 (42%), Gaps = 41/461 (8%)
Query: 29 KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR 88
K F + +E+ N Y+ +I ++ + ++++ +M + D ++ +
Sbjct: 545 KYFAQMQER--GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 602
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
+Y ++ + + S FK++ + + + L+ + +EAA R G E
Sbjct: 603 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA----FRVLSGIEKN 658
Query: 149 SRIQSLNL---LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ +++ L+ LC+ + A + EM +G P+ Y+ L+ GLC ++ A
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ F I KG + V Y +L+ C G I +A + ++L G+ P + +
Sbjct: 719 RNV----FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI-TPDAFVYS 773
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C+ D+E A LI E +RG S++S++ + G++ E K+L + +
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 832
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEE------------------EMVKGTFVPTV 367
G P+ + E ++ L + G + E + E +M+ +P +
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-L 891
Query: 368 RVYNILLKGLCDAGNSAVAVM---YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
V + +++ C GN A+M + S +GC +Y +VD LCR G+ EA
Sbjct: 892 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC----SSYLAIVDNLCRKGKLSEALN 947
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+L+EM R P +L+ L + G E L+ M+
Sbjct: 948 LLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 32/446 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ MI L +S + +++++M + V+A I Y R G ++ A +F +
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ N + +N+L+ + K ++E + F + + + L+ L +
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL---KN 572
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
DL A + Q M G P+ Y L++ + + + SM +G D
Sbjct: 573 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML----DQGVMLD 628
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
IY L+ L G ++ A ++L I + G P + + D E A ++
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNG-SVPDVHVYSSLISGLCKTADREKAFGIL 687
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E +G P++ Y+A+ L G I V + + KG P+ V Y + + K
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + A + E + G P VY++L G AG+ A+ +++M + A+
Sbjct: 748 GDISNAFYLYNEMLATG-ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASIS 804
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA-VMWLE- 462
++ LVDG C+ G+ E ++L ++ R P T +I GL GK E +++E
Sbjct: 805 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864
Query: 463 -----------------EMISQAKLP 471
+MI+Q K+P
Sbjct: 865 QQKTSESAARHFSSLFMDMINQGKIP 890
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 175/441 (39%), Gaps = 25/441 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I LS+ R+ E + QM+ + ++ I Y + G L A L + +
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ LL+ K +E F +S V + +L+ L
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-KSMLDQGVMLDNRIYGILIHNLSSSGNM 645
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A V ++ G PD Y L+ GLC +A +L M S+KG +IV
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM----SKKGVDPNIVC 701
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G I A + IL KGL + C G DI A L NE
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG-DISNAFYLYNEM 760
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L G P YS + + G + + +++EM +G S+ + + K G +
Sbjct: 761 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKM 819
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVA----- 401
E L+++ M +G VP ++ GL +AG S V ++++ K A
Sbjct: 820 QETLKLLHVIMGRG-LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 878
Query: 402 -------NGETYGILVDGL----CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
G+ +VD + C++G +A + + ++ +S +Y ++ LC
Sbjct: 879 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 938
Query: 451 IGKQYEAVMWLEEMISQAKLP 471
GK EA+ L+EM + P
Sbjct: 939 KGKLSEALNLLKEMDKRGICP 959
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 187/451 (41%), Gaps = 17/451 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + + + + P A + +E K + N VYA +I ++
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK--GLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ D+M + + + I ++ G++ E+ F + + + +++ L+
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV---FQEMDFQGC 182
+K LE+A L R + + + +D+L +SD V F+ M QG
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDV----IYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
D Y IL+ L + + A +L I + GS D+ +Y +L+ LC +
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSG----IEKNGSVPDVHVYSSLISGLCKTADRE 681
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A IL+++ +KG+ + + C G DI A+++ N L +G +P+ +Y+++
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSG-DISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
G I + +EM G P +Y G +++A+ +IEE ++G
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 800
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
++ +N L+ G C G + L + + G V N T ++ GL G+ E
Sbjct: 801 --ASISSFNNLVDGFCKRGKMQETLKLLHVIMGR-GLVPNALTIENIISGLSEAGKLSEV 857
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ E+ ++ ++ L + + GK
Sbjct: 858 HTIFVELQQKTSESAARHFSSLFMDMINQGK 888
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG PS+ +A+ DL + KV + M G P + Y + A K D
Sbjct: 203 RGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDT 262
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +V+ E +G + TV YN+L+ GLC +G A + K M + G V +G TYG L
Sbjct: 263 AKKVLVEMRERGCGLNTV-TYNVLIAGLCRSGAVEEAFGFKKDM-EDYGLVPDGFTYGAL 320
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GLC+ R EA +L+EM P V Y LI G G EA ++EM++
Sbjct: 321 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380
Query: 470 LPDISVWSSLVASVC 484
P+ + +LV +C
Sbjct: 381 QPNKITYDNLVRGLC 395
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 31/392 (7%)
Query: 83 FATAIRTYARAGQLNEAVSLFK----NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
+ T I + G+ A+ L + L Q N V + NT++ M K+ + A L+
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMY----NTVIYGMCKDKHVNDAFDLY 218
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ + + + L+ + A+ +F ++ + PD +++IL+ G C
Sbjct: 219 -SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 277
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
DR++ E ++F + ++G D+V Y +L+ C ++ A I + + G+
Sbjct: 278 DRKMKEGK----TVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN- 332
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P R + I + + ++ A +L NE + IP++ +Y+++ L GRI ++
Sbjct: 333 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 392
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
+D+M +G P+++ Y + + ALFK VD+A+ +I + +G P++ Y IL+ GLC
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG-IQPSMYTYTILIDGLC 451
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ V TY +++ G C+ G F EA +L +M S P
Sbjct: 452 KVEGYDITV----------------NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNA 495
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
TY + IR L + +A EMI++ L
Sbjct: 496 VTYEITIRSLLDNNENDKAEKLFREMITRGLL 527
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+++ T+ +++AVSLF L + N FN +L +VK +L L
Sbjct: 54 YSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT--VLSLSQK 111
Query: 143 YGWE-VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ------GCYPDRESYHILMKG 195
+ +K + + N+L + C C+ + + Q F G + D+ SY L+ G
Sbjct: 112 MEFRGIKPNLFNCNIL--IYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC A LL R+ K + V+Y T+++ +C + DA + +++ KG
Sbjct: 170 LCKVGETRAALDLL----QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ +P + + ++ A L N+ ++ P +++ + + ++ EG
Sbjct: 226 I-SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
V M +G P +V Y + + V+ A + I M +G P +R YNIL+
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTA-KSIFNTMAQGGVNPDIRSYNILIN 343
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C A+ +M + + N TY L+DGL + GR A +++++M R
Sbjct: 344 GFCKIKKVDKAMNLFNEMHCK-NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 402
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYN +I L + +A+ + + Q P + ++ L+ +C
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC 451
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 164/400 (41%), Gaps = 64/400 (16%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I + + + + ++ +M ++ I + G+L +A+ LF
Sbjct: 194 NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF 253
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ N +FN L+ K+ K++ +F + + + N LMD C
Sbjct: 254 NKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF-AMMMKQGIIPDVVTYNSLMDGYCL 312
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A +F M G PD SY+IL+ G C +++++A +L F + K
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL----FNEMHCKNIIP 368
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y +L+ L G+I A+Q+++++ +G+
Sbjct: 369 NVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP-------------------------- 402
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+++ L+ ++ + ++ + + +G PS+ Y
Sbjct: 403 ----------PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI------- 445
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
++D +V ++ T+ V ++ KGL D A+ L KM K C+ N
Sbjct: 446 --LIDGLCKVEGYDITVNTY--NVMIHGFCKKGLFDE-----ALSLLSKM-KDSSCIPNA 495
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIR------SYWPC 437
TY I + L + +A ++ EM+ R + +PC
Sbjct: 496 VTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 205/504 (40%), Gaps = 43/504 (8%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
FK+ E Y +G Y ++I L +S R E K ++D+M + V+A I +
Sbjct: 279 FKKDMEDY-GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 337
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
R G +EA + K + +++ L++ + K +++ A +L +
Sbjct: 338 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 397
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + NL+++ + A + EM+ G P+ +Y I++ GLC +A+ LL
Sbjct: 398 I-TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + KG + +Y L+ C +G + A +I +K+ + + P + +
Sbjct: 457 EM----TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV-LPDLYCYNSLIFG 511
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+ +E + + RG +P+ +YS + G + ++++ M G P+
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF--------------------------- 363
V+Y L + FK +++ + + +G
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631
Query: 364 -------VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
VP V VY+ L+ GLC + A L +MSK+ G N Y L+DGLC+
Sbjct: 632 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKS 690
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G A V +L + P TY LI G C +G A EM++ PD V+
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750
Query: 477 SSLVASVCCNTADLNVCRKTLEQL 500
S L C + DL +E++
Sbjct: 751 SVLTTG-CSSAGDLEQAMFLIEEM 773
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 7/330 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N+L+ LC+ + A ++M+ G PD +Y L+ GLC RR NEA LL M
Sbjct: 259 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 318
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
S ++V+Y L+ +G +A +++++++ G++ K + C
Sbjct: 319 ----SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 374
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+ ++ A L+ + + P +Y+ + + + ++L EM G P++
Sbjct: 375 MGQ-MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVY 433
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + L + G ++A +++EE KG P VY L+ G C GN ++A K
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKG-LKPNAFVYAPLISGYCREGNVSLACEIFDK 492
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M+K V + + Y L+ GL + GR E+++ +M R P TY+ LI G G
Sbjct: 493 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 551
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
A ++ M+ P+ ++ L+ S
Sbjct: 552 DLESAEQLVQRMLDTGLKPNDVIYIDLLES 581
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 157/370 (42%), Gaps = 19/370 (5%)
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
H + R+ G + R S ++ C+ R D A V EM +GC + +Y++L+
Sbjct: 209 HSVLQRAVEGSAARGRHGSA---LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA 265
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + EA + + G D Y L+ LC + +A +L+++
Sbjct: 266 GLCRSGAVEEA----FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 321
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
LK + + DG EG A +I E + G P+ +Y + L G
Sbjct: 322 ELKP-----NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 376
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ +L +M P + Y + F+ +A ++ EM P V Y
Sbjct: 377 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL-SEMENAGISPNVYTY 435
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+I++ GLC +G A L++M+ + G N Y L+ G CR+G A + ++M
Sbjct: 436 SIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P + YN LI GL +G+ E+ + +M + LP+ +S L+ N DL
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN-GDL 553
Query: 491 NVCRKTLEQL 500
+ ++++
Sbjct: 554 ESAEQLVQRM 563
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 178/407 (43%), Gaps = 39/407 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I ++ + ++++ +M + D ++ + +Y ++ + + S FK++
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL---LMDVLCQ 163
+ + + L+ + +EAA R G E + +++ L+ LC+
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAA----FRVLSGIEKNGSVPDVHVYSSLISGLCK 654
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A + EM +G P+ Y+ L+ GLC ++ A ++ F I KG
Sbjct: 655 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV----FNSILAKGLVP 710
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ V Y +L+ C G I +A + ++L G+ P + + + C+ D+E A L
Sbjct: 711 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI-TPDAFVYSVLTTGCSSAGDLEQAMFL 769
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I E +RG S++S++ + G++ E K+L + +G P+ + E ++ L +
Sbjct: 770 IEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 828
Query: 344 DGMVDEALEVIEE------------------EMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + E + E +M+ +P + V + +++ C GN
Sbjct: 829 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDK 887
Query: 386 AVMY---LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
A+M + S +GC +Y +VD LCR G+ EA +L+EM
Sbjct: 888 ALMLRDVIVAKSAPMGC----SSYLAIVDNLCRKGKLSEALNLLKEM 930
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 32/446 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ MI L +S + +++++M + V+A I Y R G ++ A +F +
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ N + +N+L+ + K ++E + F + + + L+ L +
Sbjct: 494 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL---KN 550
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
DL A + Q M G P+ Y L++ + + + SM +G D
Sbjct: 551 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML----DQGVMLD 606
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
IY L+ L G ++ A ++L I + G P + + D E A ++
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNG-SVPDVHVYSSLISGLCKTADREKAFGIL 665
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E +G P++ Y+A+ L G I V + + KG P+ V Y + + K
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G + A + E + G P VY++L G AG+ A+ +++M + A+
Sbjct: 726 GDISNAFYLYNEMLATG-ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASIS 782
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA-VMWLE- 462
++ LVDG C+ G+ E ++L ++ R P T +I GL GK E +++E
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842
Query: 463 -----------------EMISQAKLP 471
+MI+Q K+P
Sbjct: 843 QQKTSESAARHFSSLFMDMINQGKIP 868
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 175/440 (39%), Gaps = 25/440 (5%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I LS+ R+ E + QM+ + ++ I Y + G L A L + +
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ LL+ K +E F +S V + +L+ L
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-KSMLDQGVMLDNRIYGILIHNLSSSGNM 623
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A V ++ G PD Y L+ GLC +A +L M S+KG +IV
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM----SKKGVDPNIVC 679
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC G I A + IL KGL + C G DI A L NE
Sbjct: 680 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG-DISNAFYLYNEM 738
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L G P YS + + G + + +++EM +G S+ + + K G +
Sbjct: 739 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKM 797
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVA----- 401
E L+++ M +G VP ++ GL +AG S V ++++ K A
Sbjct: 798 QETLKLLHVIMGRG-LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 856
Query: 402 -------NGETYGILVDGL----CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
G+ +VD + C++G +A + + ++ +S +Y ++ LC
Sbjct: 857 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 916
Query: 451 IGKQYEAVMWLEEMISQAKL 470
GK EA+ L+EM + L
Sbjct: 917 KGKLSEALNLLKEMDKRGNL 936
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 136/339 (40%), Gaps = 25/339 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +I LS S + V+ ++ + V+++ I + +A + +
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S+ +N L+ + K + A +F S + + L+D C+
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVF-NSILAKGLVPNCVTYTSLIDGSCKVGD 727
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A +++ EM G PD Y +L G + L +A L+ MF R I
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR-----GHASIS 782
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ C +GK+Q+ +++L I+ +GL P + + ++ + ++ E
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGL-VPNALTIENIISGLSEAGKLSEVHTIFVE 841
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRI---VEGDKVLDEMRTKGFWPSLVM---------- 333
+ + +S++ +D+ N+G+I V D + D + +L++
Sbjct: 842 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 901
Query: 334 -----YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
Y A + L + G + EAL +++E +G PT+
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 940
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 210/487 (43%), Gaps = 43/487 (8%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE------VIDQMKGDSCE 77
P +L F + YP + H Y SM+ L ++R+ + E V + KG +
Sbjct: 89 PPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLI-AHRMNQQAESLLHFVVSRKGKGSA-- 145
Query: 78 CKDSVFATAIRT----------------YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
SVFA+ + T Y G +++A+ F+ + N L
Sbjct: 146 --SSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCL 203
Query: 122 LKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
L+ M+K S A ++ L S Y + + N+LM+ LC+ + A +F E+
Sbjct: 204 LERMIKMSSPMVALEFYLEILDSGY----PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIR 259
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSGEDIVIYRTLLFALCD 237
G P S++ L+ G C L E L M +R+ D+ Y L+ LC
Sbjct: 260 KTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF-----PDVFTYSALIDGLCK 314
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ +++DA + +++ +GL + C +G ++ A + + +G L
Sbjct: 315 ECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR-VDLALEIYQQMFTKGLKADLV 373
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
Y+ + L G E K + EM +G P Y L K+G ++ ALE+ +E
Sbjct: 374 LYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEM 433
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ +G + V + ++ GLC G A L++M + G + TY +++DG C+ G
Sbjct: 434 VKEGIQLDNV-AFTAIISGLCRDGKIVDAERTLREMLR-AGLKPDDGTYTMVMDGFCKKG 491
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
++L+EM + P V TYNVL+ GLC G+ A M L M++ +PD ++
Sbjct: 492 DVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYN 551
Query: 478 SLVASVC 484
L+ C
Sbjct: 552 ILLQGHC 558
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 181/416 (43%), Gaps = 46/416 (11%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K SP+ AL+ + E + Y N + ++ L + ++ + + + D+++ +
Sbjct: 209 KMSSPMVALEFYLEILDS--GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPT 266
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
F T I Y ++G L E L + +F +++ L+ + KE +LE A+
Sbjct: 267 AVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN---- 322
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
H+F+EM +G P+ ++ L+ G C +
Sbjct: 323 --------------------------------HLFKEMCDRGLVPNDVTFTTLINGQCKN 350
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R++ A + MF KG D+V+Y TL+ LC G ++A + + ++ ++GL
Sbjct: 351 GRVDLALEIYQQMF----TKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
K + C +G D+E A + E + G +++A+ L +G+IV+ ++ L
Sbjct: 407 KFTYTTLLDGSCKEG-DLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTL 465
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
EM G P Y + K G V ++++E G +P V YN+L+ GLC
Sbjct: 466 REMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG-HIPGVITYNVLMNGLCK 524
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM-LIRSY 434
G A M L M +G V + TY IL+ G C+ G+ + V EM L+ Y
Sbjct: 525 QGQVKNADMLLNAML-NLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDY 579
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 8/337 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+FN L+ + KE K++ A ++F ++ S N L++ C+ + +
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIF-DEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMV 292
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ +PD +Y L+ GLC + +L +A HL F + +G + V + TL+ C
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHL----FKEMCDRGLVPNDVTFTTLINGQC 348
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G++ A++I +++ KGLKA + + C G E A+ + E RG IP
Sbjct: 349 KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFRE-ARKFVGEMTKRGLIPDK 407
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + EG + ++ EM +G V + A ++ L +DG + +A E
Sbjct: 408 FTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA-ERTLR 466
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
EM++ P Y +++ G C G+ + LK+M G + TY +L++GLC+
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD-GHIPGVITYNVLMNGLCKQ 525
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
G+ A +L ML P TYN+L++G C GK
Sbjct: 526 GQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E++ + P V +N+L+ LC G A + ++ K G ++ L++G C+
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRK-TGLQPTAVSFNTLINGYCKS 280
Query: 417 GRFLEASR---VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
G E R V+EE + +P V TY+ LI GLC + +A +EM + +P+
Sbjct: 281 GNLEEGFRLKMVMEEFRV---FPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPND 337
Query: 474 SVWSSLVASVCCN 486
+++L+ C N
Sbjct: 338 VTFTTLINGQCKN 350
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 10/375 (2%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
+ + ++ E + QM C ++AT I + G A + + + +
Sbjct: 245 DEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCY 304
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
NT+LK + + E A L L Y + N+L+D CQ D + + ++M
Sbjct: 305 NTVLKGICSADRWEKAEEL-LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 363
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
GC PD +Y ++ G C + ++EA LL +M G + + Y +L LC
Sbjct: 364 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM----PSCGCKPNTISYTIVLKGLCST 419
Query: 239 GKIQDAMQILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ DA +++ +++++G L P + I+ C G +E A L+ + L+ G P L
Sbjct: 420 ERWVDAEELMSRMIQQGCLPNPVTFNTIINFL-CKKGL-VEQAIELLKQMLVNGCNPDLI 477
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SYS + L G+ E ++L+ M KG P+++ Y + AL ++G +D+ +++ +
Sbjct: 478 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMF-DN 536
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ T +YN ++ LC + +A+ +L M GC+ N TY L+ GL +G
Sbjct: 537 IQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSN-GCMPNESTYTALIKGLASEG 595
Query: 418 RFLEASRVLEEMLIR 432
EA +L E+ R
Sbjct: 596 LLCEAQDLLSELCSR 610
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 195/407 (47%), Gaps = 16/407 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ +R G++ +A+++ ++ +CV ++ +++ + +A + L +
Sbjct: 118 TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA-LRVLEA 176
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + NL+++ +C D L + +++ GC D SY+ ++KGLC +R
Sbjct: 177 LHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKR 236
Query: 202 LNEATHLLYSM------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ L+ M +++Q G DI +Y T++ +C +G + A +IL ++ G
Sbjct: 237 WGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYG 296
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
LK P + L + E A+ L+ E + + P + +D + + +V
Sbjct: 297 LK-PNVVCYNTVLKGICSADRWEKAEELLTE-MYQKNCPLDDVTFNILVDFFCQNGLV-- 352
Query: 316 DKV---LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
D+V L++M G P ++ Y + K+G++DEA+ +++ M P Y I
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKN-MPSCGCKPNTISYTI 411
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+LKGLC A + +M +Q GC+ N T+ +++ LC+ G +A +L++ML+
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQ-GCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN 470
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
P + +Y+ +I GL GK EA+ L MI++ P++ +SS+
Sbjct: 471 GCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSM 517
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 207/493 (41%), Gaps = 69/493 (13%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC-------------ECKDSVFAT 85
PN PV + G RI + V+D+M SC C+ +++
Sbjct: 114 PNAYTYFPVVRGLCG----RGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169
Query: 86 AIRT----YARA------------------GQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
A+R +A+ G ++E + + + L F C S+N +LK
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229
Query: 124 ----------------EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
EMVK EA + C I+ ++D +C+
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVH--EALSQMAQHGC-----TPDIRMYATIIDGICKEGHH 282
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
++A + M G P+ Y+ ++KG+C+ R +A LL M+ QK D V
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMY----QKNCPLDDVT 338
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ C G + +++LE++L G + C +G I+ A L+
Sbjct: 339 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL-IDEAVMLLKNM 397
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P+ SY+ + L + R V+ ++++ M +G P+ V + + L K G+V
Sbjct: 398 PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLV 457
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++A+E++++ +V G P + Y+ ++ GL AG + A+ L M + G N TY
Sbjct: 458 EQAIELLKQMLVNGCN-PDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNVITYS 515
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+ L R+GR + ++ + + + YN +I LC + A+ +L M+S
Sbjct: 516 SMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSN 575
Query: 468 AKLPDISVWSSLV 480
+P+ S +++L+
Sbjct: 576 GCMPNESTYTALI 588
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 181/407 (44%), Gaps = 22/407 (5%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR+ AG+ +AV + L +N ++ + ++EAA R
Sbjct: 59 IRSLCVAGRTADAV---RALDAAGNAAGVVDYNAMVAGYCRVGQVEAAR----RLAAAVP 111
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + ++ LC R AL V EM + C P YH++++ C + A
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L ++ KGS D ++ A+CDQG + + +++L K+ G +A + +
Sbjct: 172 RVLEALH----AKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227
Query: 267 --DLCPC---NDGEDIEGAKSLINEALIR----GGIPSLASYSAMAIDLYNEGRIVEGDK 317
LC D E++ ++EAL + G P + Y+ + + EG ++
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L M + G P++V Y L + ++A E++ E K + V +NIL+
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV-TFNILVDFF 346
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G + L++M + GC+ + TY +++G C++G EA +L+ M P
Sbjct: 347 CQNGLVDRVIELLEQMLEH-GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+Y ++++GLCS + +A + MI Q LP+ +++++ +C
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLC 452
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 131/286 (45%), Gaps = 10/286 (3%)
Query: 41 YRHNGPV----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL 96
Y+ N P+ + ++ ++ + + E+++QM C + T I + + G +
Sbjct: 328 YQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 387
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+EAV L KN+ C T S+ +LK + + A L R + + + + N
Sbjct: 388 DEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPV-TFNT 446
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+++ LC+ + A+ + ++M GC PD SY ++ GL + EA LL M
Sbjct: 447 IINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI--- 503
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
KG +++ Y ++ FAL +G+I +Q+ + I +++ + + C E
Sbjct: 504 -NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE- 561
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ A + + G +P+ ++Y+A+ L +EG + E +L E+
Sbjct: 562 TDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 51/313 (16%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ +LC G+ DA++ L+ G A + + C G+ +E A+ L +
Sbjct: 58 LIRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCRVGQ-VEAARRLAAAVPVP 113
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+ +Y + L GRI + VLDEM ++ P MY + + + G A
Sbjct: 114 ---PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA 170
Query: 351 LEVIEEEMVKGTFVPT----------------------------------VRVYNILLKG 376
L V+E KG+ + T + YN +LKG
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKG 230
Query: 377 LCDAGNSAVAVMYLKKMSK---------QVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
LC A + +M K Q GC + Y ++DG+C++G A+ +L
Sbjct: 231 LCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
M P V YN +++G+CS + +A L EM Q P V +++ C
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMY-QKNCPLDDVTFNILVDFFCQN 349
Query: 488 ADLNVCRKTLEQL 500
++ + LEQ+
Sbjct: 350 GLVDRVIELLEQM 362
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 201/438 (45%), Gaps = 10/438 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +++ L + +I E K+V+ + D+ + + + RAG ++ A + +
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + + +F++++ +VK L A ++R + + + L+D + +
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAAD-YMRKMKDSGIAPNVVTYGTLIDGFFKFQG 482
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL V+++M +G E+ + ++ L N R N ++F + ++G D V
Sbjct: 483 QEAALDVYRDMLHEGV----EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLIN 285
Y TL+ L G + A ++ ++++ K L +P + + + + C C G+ E AKS +
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNL-SPDAVVYNVFINCLCTLGKFSE-AKSFLK 596
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E G P A+Y+ M EG+ + K+L EM+ P+L+ Y + L + G
Sbjct: 597 EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAG 656
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+V +A + + EM F PT + +L+ C ++ + ++ G A+
Sbjct: 657 VVKKA-KFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITV 714
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y LV LC G A+ VL+EML R P T+N LI G C A +M+
Sbjct: 715 YNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQML 774
Query: 466 SQAKLPDISVWSSLVASV 483
Q P+I+ +++L+ +
Sbjct: 775 HQGLSPNIATFNTLLGGL 792
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 195/437 (44%), Gaps = 43/437 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S++ S EV+++MK D E + I Y + ++EA SL++
Sbjct: 225 YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEG-- 282
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
MV+ L + +L+ L+D LC+ +
Sbjct: 283 -----------------MVRSGVLP-----------------DVVTLSALVDGLCRDGQF 308
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F+EMD G P+ +Y L+ L RR +E+ LL M R G D+V+
Sbjct: 309 SEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR----GVVMDLVM 364
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ L +GKI++A +L + + C G +I+GA+ ++ +
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAG-NIDGAEQVLLQM 423
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ IP++ ++S++ L G + + + +M+ G P++V Y + FK
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ AL+V + + +G V + L+ GL GN A K M ++ G + + Y
Sbjct: 484 EAALDVYRDMLHEGVEANNF-VVDSLVNGLRKNGNIEGAEALFKDMDER-GLLLDHVNYT 541
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DGL + G A +V +E++ ++ P YNV I LC++GK EA +L+EM +
Sbjct: 542 TLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT 601
Query: 468 AKLPDISVWSSLVASVC 484
PD + +++++A+ C
Sbjct: 602 GLEPDQATYNTMIAARC 618
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 20/421 (4%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V M + E + V + + + G + A +LFK++ + + ++ TL+ +
Sbjct: 488 DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQS-----LNLLMDVLCQCRRSDLALHVFQEMDFQ 180
K + AA + G E+ + S N+ ++ LC + A +EM
Sbjct: 548 FKTGNMPAAFKV------GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT 601
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G PD+ +Y+ ++ C + + ++A LL M R S K +++ Y TL+ L + G
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEM-KRNSIK---PNLITYTTLVVGLLEAGV 657
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS-LASY 299
++ A +L ++ G AP S H+ L C+ G I+E ++ G+ + + Y
Sbjct: 658 VKKAKFLLNEMASAGF-APTSLTHQRVLQACS-GSRRPDVILEIHELMMGAGLHADITVY 715
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L G VLDEM T+G P + + A + K +D A + + +
Sbjct: 716 NTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLH 775
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G P + +N LL GL AG A L M K+VG N TY ILV G +
Sbjct: 776 QG-LSPNIATFNTLLGGLESAGRIGEADTVLSDM-KKVGLEPNNLTYDILVTGYAKKSNK 833
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+EA R+ EM+ + + P TYN L+ G +A EM + L S + L
Sbjct: 834 VEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL 893
Query: 480 V 480
+
Sbjct: 894 L 894
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 197/482 (40%), Gaps = 53/482 (10%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N N Y ++ + I ++V+ QM+ S F++ I + G L +A
Sbjct: 392 NITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKA 451
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + ++ TL+ K EAA Y + +++ N ++D
Sbjct: 452 ADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA-----LDVYRDMLHEGVEANNFVVD 506
Query: 160 VLCQCRRSDLALH----VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L R + + +F++MD +G D +Y LM GL + A + +
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA----FKVGQE 562
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +K D V+Y + LC GK +A L+++ GL+ ++ + + C +G+
Sbjct: 563 LMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGK 622
Query: 276 DIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ K L + + R I P+L +Y+ + + L G + + +L+EM + GF P+ + +
Sbjct: 623 TSKALKLL--KEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTH 680
Query: 335 EAKL---------------------AALFKD--------------GMVDEALEVIEEEMV 359
+ L A L D GM A V++E +
Sbjct: 681 QRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT 740
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+G P +N L+ G C + + A +M Q G N T+ L+ GL GR
Sbjct: 741 RG-IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ-GLSPNIATFNTLLGGLESAGRI 798
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA VL +M P TY++L+ G + EA+ EM+S+ +P S ++SL
Sbjct: 799 GEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSL 858
Query: 480 VA 481
++
Sbjct: 859 MS 860
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 139/306 (45%), Gaps = 9/306 (2%)
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
F+ D + + ++ C+ R L A LL S SQ D V Y L AL +Q
Sbjct: 69 FRPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQ 128
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG-GIPSL- 296
G + A +L ++ ++G+ + C G + G + + E L+RG GI L
Sbjct: 129 GHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTG--LVGEAAALAEMLVRGRGIDGLD 186
Query: 297 -ASYSAMAIDLYNEGR-IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++A+ ID Y + + + V++ M T+G +V Y + +A F G D ALEV+
Sbjct: 187 VVGWNAL-IDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E G P V Y L+ C A + M + G + + T LVDGLC
Sbjct: 246 ERMKADGV-EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS-GVLPDVVTLSALVDGLC 303
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
RDG+F EA + EM P TY LI L + E++ L EM+S+ + D+
Sbjct: 304 RDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLV 363
Query: 475 VWSSLV 480
++++L+
Sbjct: 364 MYTALM 369
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y LAAL + G A V+ E +G V V L+ GLC G A +
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALV-GLCRTGLVGEAAALAE 174
Query: 392 KMSKQVGCVA-NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ + G + + L+DG C+ A V+E M + V YN L+ G
Sbjct: 175 MLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFH 234
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G A+ +E M + P++ +++L+ C
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYC 268
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 197/455 (43%), Gaps = 10/455 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI + + I + + ++MK + + I Y + G+L++ V F+ +
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C ++N+L+ K KL + F R +K + S + L+D C+
Sbjct: 195 KSMSCEPDVITYNSLINCFCKSGKLPKG-LEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L++A L M + G ++V
Sbjct: 254 MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML----EVGVEWNVV 309
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LCD ++++A ++ K++ G+ P + + ++++ A L+NE
Sbjct: 310 TYTALIDGLCDAERMKEAEKLFGKMVTAGV-IPNLASYNALIHGFVKAKNMDRALELLNE 368
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P L Y L +I V++EM+ G + ++Y + A FK G
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E L ++EE M + TV + +L+ GLC + A+ Y +MS G N Y
Sbjct: 429 PTEGLHLLEE-MQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVY 487
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++DGLC++ + A+ + E+M P Y L+ G G EA+ ++M
Sbjct: 488 TAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE 547
Query: 467 QAKLPDISVWSSLVASVC-CNTADLNVCRKTLEQL 500
D+ ++SLV CN L R LE++
Sbjct: 548 IGMKLDLLAYTSLVWGFSQCN--QLQKARSFLEEM 580
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 198/440 (45%), Gaps = 11/440 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ ++ +L + + E + +MK K + +A+ G+ + FK++
Sbjct: 65 VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++N ++ M KE +EAA LF + + + + N ++D + R
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTV-TYNSMIDGYGKVGR 183
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDI 225
D ++ F+EM C PD +Y+ L+ C +L + F+R + Q G ++
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLE-----FYREMKQSGLKPNV 238
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ A C + +Q A++ + R G + + C G ++ A L N
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIG-NLSDAFRLAN 297
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E L G ++ +Y+A+ L + R+ E +K+ +M T G P+L Y A + K
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D ALE++ E +G P + +Y + GLC A + + +M ++ G AN
Sbjct: 358 NMDRALELLNELKGRG-IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM-QENGIKANTLI 415
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+D + G E +LEEM + V T+ VLI GLC +A+ + M
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475
Query: 466 SQAKL-PDISVWSSLVASVC 484
+ L P+ +V+++++ +C
Sbjct: 476 NDFGLQPNAAVYTAMIDGLC 495
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P +++A + L GM++EA + + M + P R N LL G +
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSK-MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ K M G TY I++D + ++G A + EEM R P TYN +I G
Sbjct: 120 FFKDMIG-AGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ + V + EEM S + PD+ ++SL+ C
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFC 214
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L + L K K+ AL++ E K + + + +Y + I L +I K
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGR--GIQPDLLLYGTFIWGLCGLEKIEAAK 398
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+++M+ + + ++ T + Y ++G E + L + + + + +F L+ +
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + A F R + ++ ++D LC+ + A +F++M +G PD
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R +Y LM G + EA L M ++ G D++ Y +L++ ++Q A
Sbjct: 519 RTAYTSLMDGNLKQGNMLEALALRDKM----AEIGMKLDLLAYTSLVWGFSQCNQLQKAR 574
Query: 246 QILEKIL 252
LE+++
Sbjct: 575 SFLEEMI 581
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 198/448 (44%), Gaps = 69/448 (15%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y +MI L ++ ++ + ++++M E D F I Y + L +A+ L
Sbjct: 115 NTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLL 170
Query: 104 KNLSQFNCVNWTQSFNT-LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL- 161
+ +SF+ + ++V +K+ R G EV R++S+ ++DV+
Sbjct: 171 E-----------KSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVA 219
Query: 162 --------CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
C ++ + V ++M+ +GC P+ ++Y+IL G C+ L+ A L M
Sbjct: 220 YNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM- 278
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
G + + Y TL+ LC G+++D +ILE
Sbjct: 279 ---KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE------------------------ 311
Query: 274 GEDIEGAKSLINEALIRGGIPS-LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
L+ E+ RGG ++ Y+++ LY + + E + L +M +P V
Sbjct: 312 ---------LMEES--RGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAV 358
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
++ +G + +A V ++ M+K VP+V VY L+ G C GN A + +
Sbjct: 359 DRSLRILGFCNEGSIGDAKRVYDQ-MIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 417
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M G T+ L+ C G+ A +++E+M+ R P + +Y+ ++ LC+ G
Sbjct: 418 MVDH-GYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKG 476
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+AV +M+ + LPD S W+S++
Sbjct: 477 DFQKAVRLFLQMVEKDILPDYSTWNSML 504
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 22/438 (5%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K +++ + GD D F ++ ++ +A L + + T +NT++
Sbjct: 71 KMMMNGVSGD-----DYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHA 125
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K K+ A RS V+ + N+L+ CQ AL + ++ G P
Sbjct: 126 LCKNGKVGRA-----RSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 180
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D + ++ LC R+ E +L R+ G D+V Y TL+ C GK +
Sbjct: 181 DVVTATKVVGILCKAGRVTEGVEVLE----RVESMGGVVDVVAYNTLIKGFCMLGKAKVG 236
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++L+ + KG P + I D ++ A L N+ G + +Y +
Sbjct: 237 HRVLKDMEIKGC-LPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIR 295
Query: 305 DLYNEGRIVEGDKVLDEMRTK--GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L + GR+ +G K+L+ M G + Y + + L+K +EALE + + M K
Sbjct: 296 GLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTK-MEK-- 352
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P ++ + G C+ G+ A +M K+ G V + Y L+ G C+DG EA
Sbjct: 353 LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKE-GGVPSVLVYVCLIHGFCQDGNVREA 411
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ EM+ Y+P T+N LI C GK A+ +E+M+ + LPD+ +S +V +
Sbjct: 412 FELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDA 471
Query: 483 VCCNTADLNVCRKTLEQL 500
+ CN D + Q+
Sbjct: 472 L-CNKGDFQKAVRLFLQM 488
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 173/439 (39%), Gaps = 45/439 (10%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+S+F T +R RA + + + + +++F + FN++L +VKE ++ A +
Sbjct: 11 ESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED-IDLAREFYR 69
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ V + +LM LC R A + Q M +G P+ Y+ ++ LC +
Sbjct: 70 KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 129
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
++ A L+ M V + L+ A C + + A+ +LEK G
Sbjct: 130 GKVGRARSLMNEMVE--------PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPD 181
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
++ C G EG + ++ GG+ + +Y+ + G+ G +VL
Sbjct: 182 VVTATKVVGILCKAGRVTEGVE-VLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVL 240
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M KG P++ Y + GM+D A+++ + G Y+ L++GLC
Sbjct: 241 KDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINW-NFMTYDTLIRGLCS 299
Query: 380 AGNSAVAVMYLKKMSKQVGCVA------NGETYGIL----------------------VD 411
G L+ M + G N YG+ VD
Sbjct: 300 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVD 359
Query: 412 ------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
G C +G +A RV ++M+ P V Y LI G C G EA + EM+
Sbjct: 360 RSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 419
Query: 466 SQAKLPDISVWSSLVASVC 484
P +++L+++ C
Sbjct: 420 DHGYFPTAPTFNALISAFC 438
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 122/280 (43%), Gaps = 10/280 (3%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEM 125
V+ M+ C + Y +G L+ A+ LF ++ + + +NW +++TL++ +
Sbjct: 239 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM-KTDGINWNFMTYDTLIRGL 297
Query: 126 VKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++E IL L RI N ++ L + + + AL +M + +P
Sbjct: 298 CSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFP 355
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ + G CN+ + +A + M ++G +++Y L+ C G +++A
Sbjct: 356 RAVDRSLRILGFCNEGSIGDAKRVYDQMI----KEGGVPSVLVYVCLIHGFCQDGNVREA 411
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+++ +++ G + + C G+ + A L+ + + RG +P + SYS M
Sbjct: 412 FELINEMVDHGYFPTAPTFNALISAFCGQGK-VGSALKLMEDMVGRGCLPDMGSYSPMVD 470
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
L N+G + ++ +M K P + + L L ++
Sbjct: 471 ALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 510
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 196/443 (44%), Gaps = 33/443 (7%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS--QFNCV 112
L + R +M+ V +M E + T + ++ R G++++A L + + C+
Sbjct: 206 LRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCL 265
Query: 113 NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
++N ++ + ++ +LE A L R K+ + N L+ + A
Sbjct: 266 PSDVTYNVVINGLARKGELEKAAQLVDR--MRMSKKASAFTFNPLITGYFARGSVEKAGA 323
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+ EM+ +G P +Y+ ++ G+ + A F + G D++ Y +L+
Sbjct: 324 LQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAAR----MKFVEMRAMGLLPDLITYNSLI 379
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEAL 288
C G +++A+ + + R GL AP + I L DG D+E A+ E +
Sbjct: 380 NGYCKAGNLKEALWLFGDLKRAGL-APSVLTYNILL----DGYCRLGDLEEARRFKQEMV 434
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEG----DKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+G P +++Y+ L N R V + DEM +KG P Y +++A
Sbjct: 435 EQGCQPDVSTYTI----LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA-VMYLKKMSK--QVGCVA 401
G EA ++ E + +G TV YNI L GLC +GN A V+++K +S Q C+
Sbjct: 491 GSTSEAFQLTEVMISRGISSDTV-TYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI- 548
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+ C GR EA + + ML+ P TY V I C G Y A W
Sbjct: 549 ---TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWF 605
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
++M+ + P+ ++ L+ ++C
Sbjct: 606 QKMLEEGVRPNEVTYNVLIHALC 628
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 187/453 (41%), Gaps = 43/453 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L+ + + +++D+M+ S + F I Y G + +A +L +
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEM 328
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-------------------SCYGWEV 147
V ++NT++ M + +EAA + F+ C +
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNL 388
Query: 148 K---------------SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
K + + N+L+D C+ + A QEM QGC PD +Y IL
Sbjct: 389 KEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTIL 448
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
M G R L ++ F + KG D Y T + A G +A Q+ E ++
Sbjct: 449 MNGSRKVRNLA----MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMI 504
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+G+ + + C G +++ A L + + G P +Y+ + GR+
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSG-NLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRL 563
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E + D M G PS V Y + A + G + A ++ + +G P YN+
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV-RPNEVTYNV 622
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ LC G + +A + +M ++ G N TY +L+DG C++G + EA R+ EM
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLER-GLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQH 681
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
P T+N L +G G+ A+ ++E ++
Sbjct: 682 GIHPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 41/314 (13%)
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S L L F+EM G P + +++++ L ++ R ++ + S++ + Q G IV
Sbjct: 177 STLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDD----MRSVYAEMLQLGIEPSIV 232
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TLL + +G++ A ++L ++ E
Sbjct: 233 TYNTLLDSFFREGRVDQAAKLLREM----------------------------------E 258
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A G +PS +Y+ + L +G + + +++D MR S + + F G
Sbjct: 259 ARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGS 317
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V++A ++ EM VPTV YN ++ G+ +GN A M +M + +G + + TY
Sbjct: 318 VEKA-GALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM-RAMGLLPDLITY 375
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L++G C+ G EA + ++ P V TYN+L+ G C +G EA + +EM+
Sbjct: 376 NSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE 435
Query: 467 QAKLPDISVWSSLV 480
Q PD+S ++ L+
Sbjct: 436 QGCQPDVSTYTILM 449
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 188/427 (44%), Gaps = 57/427 (13%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKD---------SVFATAIRTY 90
++RH+ +A M L+ ++R E+ ++ + C C D S+F +I Y
Sbjct: 99 SFRHDHSTFAWMARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQTESIFQFSISAY 158
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
RA + +EAV F ++ + ++ S +N L+ VK + + A + F V
Sbjct: 159 CRARKFDEAVFAFDSMRKL--IDGRPSVVVYNILINGFVKSGRFDKA-LGFYSRMLSDRV 215
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + + N+L+ C+ + AL +F+EM +GC P+ S++ L+KG +R+ +
Sbjct: 216 KPDVYTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIA 275
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L Y M + G V L+ L +GKI +A +IL RK +
Sbjct: 276 LAYEMI----ELGCKFSSVTCEILMDGLSREGKIFEACEILLDFSRKQV----------- 320
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+P Y + L +G + +V+DE+ +G
Sbjct: 321 -------------------------LPKDYDYYGVVEMLCGKGNAGKAMEVVDELWMEGN 355
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
PS + + L K+G V++A+ V E M++ +P +N LL+ LC+ V
Sbjct: 356 VPSFITSTTLIDGLRKEGRVNDAMNVTER-MLEVGMIPDSVTFNSLLQDLCNV-RKTVEA 413
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L+ ++ G + +TY LV G +G +E R++EEML + + P + TYN L+
Sbjct: 414 NKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNRLMDR 473
Query: 448 LCSIGKQ 454
L + K+
Sbjct: 474 LLNTHKK 480
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
T ++ + C A AV M K + + Y IL++G + GRF +A
Sbjct: 147 TESIFQFSISAYCRARKFDEAVFAFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGF 206
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML P V T+N+LI G C + +A+ +EM + P++ +++L+
Sbjct: 207 YSRMLSDRVKPDVYTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTLI 261
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEM--LIRSYWPCVETYNVLIRGLCSIGKQY 455
C + + CR +F EA + M LI P V YN+LI G G+
Sbjct: 143 SCPQTESIFQFSISAYCRARKFDEAVFAFDSMRKLIDG-RPSVVVYNILINGFVKSGRFD 201
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+A+ + M+S PD+ ++ L++ C N+
Sbjct: 202 KALGFYSRMLSDRVKPDVYTFNILISGYCRNS 233
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 45/375 (12%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C + F+ L++ +KE ++ A F L G+ K + + N+++ + + +R++L
Sbjct: 910 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGF--KPSVYTCNMILASMVKDKRTEL 967
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
+F+EM +G P+ +++IL+ GLC + L +A +LL M + G IV Y
Sbjct: 968 VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM----EENGFVPTIVTYN 1023
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TLL C +G+ + A+++++ ++ KG++A D+C
Sbjct: 1024 TLLNWYCKKGRYKAAIELIDYMICKGIEA--------DVC-------------------- 1055
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+Y+ +L R + +L +MR + P+ V Y + K+G +
Sbjct: 1056 --------TYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 1107
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +V EM K P YN L+ G C G+ A+ L M + G N TYG L
Sbjct: 1108 AAQVF-NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM-EAAGLRLNEVTYGTL 1165
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GLC+ +F A R+LE M + Y VLI GLC G EAV + M
Sbjct: 1166 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 1225
Query: 470 LPDISVWSSLVASVC 484
PD+ +SSL+ C
Sbjct: 1226 NPDVITYSSLINGFC 1240
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 177/404 (43%), Gaps = 10/404 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLR 140
F I G L +A +L K + + V ++NTLL K+ + +AA ++
Sbjct: 986 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
C G +++ + + N+ +D LC RS A + ++M + P+ +Y+ L+ G +
Sbjct: 1046 ICKG--IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 1103
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ A + F +S+ + V Y L+ C G ++A+++L+ + GL+ +
Sbjct: 1104 KIGVAAQV----FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ C E E AK L+ + + +Y+ + L G + E +++
Sbjct: 1160 VTYGTLLNGLCKH-EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M G P ++ Y + + + G + A E+I M + V +Y+ L+ C
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR-MYRSGLVLNKIIYSTLIYNFCQH 1277
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
GN A+ M+ G A+ T +LV LCRDG+ EA + L M P T
Sbjct: 1278 GNVTEAMKVYAVMNCN-GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 1336
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+ +I G SIG A + ++MI + P + SL+ +C
Sbjct: 1337 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 208/498 (41%), Gaps = 50/498 (10%)
Query: 24 PLTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
PL A F + + ++P++ Y S++ L + + E K+ ++++
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFF----TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 1405
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ T + ++G L+EAV+LF + Q N + + ++++LL + ++ K A LF +
Sbjct: 1406 MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 1465
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ L+D L + A + F+EM +G PD +++ ++ +
Sbjct: 1466 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 1525
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +M W G ++ Y LL + + + + ++R+G+ K
Sbjct: 1526 MMKANDFFSTMRWW----GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 1581
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLD 320
H + L G G K L+ + ++ G + +++ + I+ Y+E G++ + +++
Sbjct: 1582 TFHSLILGLSKSGIPDLGVK-LLGKMIMEGTLADQFTFNIL-INKYSESGKMRKAFDLVN 1639
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M T G +P Y L K E+ V+ EM++ +P Y L+ G+C
Sbjct: 1640 FMNTLGVFPDRDTYNHIFNGLNKKSAFRES-TVVLHEMLENGVIPKHAQYITLINGMCRV 1698
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G+ A LK + +G ++ +V GL G+ +A VL+ ML P + T
Sbjct: 1699 GDIQGA-FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 1757
Query: 441 -----------------------------------YNVLIRGLCSIGKQYEAVMWLEEMI 465
YNVLI G+C+ G A EEM
Sbjct: 1758 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1817
Query: 466 SQAKLPDISVWSSLVASV 483
+ P+I+ ++ LV ++
Sbjct: 1818 HRDLCPNITTYAVLVDAI 1835
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 177/439 (40%), Gaps = 7/439 (1%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ L + + K ++++M+ + + I + G L+EAV
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L N+ + ++++L+ + +++A + R V ++I L+ +
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN-F 1274
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ A+ V+ M+ G D + ++L+ LC D +L EA L M S+ G
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM----SRIGL 1330
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y ++ G +A + +++ G + C G +E K
Sbjct: 1331 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 1390
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L I G + S+ Y+ + + G + E + D+M P Y + L L
Sbjct: 1391 FLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 1449
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ G A+ + M +GT P +Y L+ GL AG+ A + ++M K+ C
Sbjct: 1450 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC-P 1508
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ + ++D R G+ ++A+ M P + TYN+L+ G +
Sbjct: 1509 DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 1568
Query: 462 EEMISQAKLPDISVWSSLV 480
M+ + PD + SL+
Sbjct: 1569 STMMREGIFPDKLTFHSLI 1587
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 30/428 (7%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEK---YPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+ L+ + +K K+ +TA+ +F A + +PN+ +Y ++ LS++
Sbjct: 1444 SLLTGLCRKGKA-VTAVCLFGTAMGRGTLFPNH----VMYTCLVDGLSKAGHPKAAFYFF 1498
Query: 69 DQM--KGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++M KG C D+V F I + +R GQ+ +A F + + ++N LL
Sbjct: 1499 EEMMKKG---TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
K+ L L S Y ++ I + + L+ L + DL + + +M +G
Sbjct: 1556 SKKQAL-----LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 1610
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D+ +++IL+ ++ +A L+ M + G D Y + L +
Sbjct: 1611 TLADQFTFNILINKYSESGKMRKAFDLVNFM----NTLGVFPDRDTYNHIFNGLNKKSAF 1666
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+++ +L ++L G+ ++ + C G DI+GA L +E G + SA
Sbjct: 1667 RESTVVLHEMLENGVIPKHAQYITLINGMCRVG-DIQGAFKLKDEMEALGFGSHEVAESA 1725
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M L + G+ + VLD M P++ + + +D + EAL++ + G
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+ V YN+L+ G+C G+SA A ++M + C N TY +LVD + ++
Sbjct: 1786 LKLDVV-AYNVLIMGMCANGDSAAAFELYEEMRHRDLC-PNITTYAVLVDAISAANNLIQ 1843
Query: 422 ASRVLEEM 429
++L ++
Sbjct: 1844 GEKLLTDL 1851
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 36/294 (12%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
++ L+ +G I A++ E + G K P + L + E SL E
Sbjct: 916 VFDLLIRVYLKEGMIDYAVETFELVGLVGFK-PSVYTCNMILASMVKDKRTELVWSLFRE 974
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P++ +++ + L EG + + +L +M GF P++V Y L K G
Sbjct: 975 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV--------- 397
A+E+I+ + KG V YN+ + LC SA A + LKKM K++
Sbjct: 1035 YKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 1093
Query: 398 ----GCVANGE---------------------TYGILVDGLCRDGRFLEASRVLEEMLIR 432
G V G+ TY L+ G C G F EA R+L+ M
Sbjct: 1094 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 1153
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY L+ GLC K A LE M + ++ L+ +C N
Sbjct: 1154 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKN 1207
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 223/480 (46%), Gaps = 12/480 (2%)
Query: 6 PRLLT-PTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P L+T +++ +IK +K A + KE E + N VY ++I + I+E
Sbjct: 324 PSLITYSVFINGLIKLEKID-EANCVLKEMSEL--GFVPNEVVYNTLIDGYCKMGNISEA 380
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
++ D M + I+ + ++ Q+ +A ++ + + SF+ ++
Sbjct: 381 LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + + A + F+R ++ L L+ LC+ + A+ ++ + +G P
Sbjct: 441 LCLKFRFVTA-LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVP 499
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ + + L+ GLC + E LL M R G D + Y TL+ C +GK+++
Sbjct: 500 NIVTSNALIHGLCKAGNMQETLKLLRDMLER----GLVFDRITYNTLISGCCKEGKVKEG 555
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ E++++KG++ P + L + + I+ A L +E G +P++ +Y M
Sbjct: 556 FELKEEMVKKGIQ-PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
++ EG+ +L+E+ +K + V+Y + + A +G ++ A + ++ +G +
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
+ Y+ L+ GLC+ G A L +M K+ G + N Y ++ G + G+ + +
Sbjct: 675 -SCATYSSLMHGLCNIGLVDDAKHLLDEMRKE-GLLPNVVCYTTIIGGYSKLGQMNKVNI 732
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VL+EM + P TY ++I G C +GK EA L EM + LPD +++ +C
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC 792
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 191/438 (43%), Gaps = 43/438 (9%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F+T I + + + ++A+ LF + + ++N ++ + K +L+ A+ F
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAY-RFKEK 316
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+V + + ++ ++ L + + D A V +EM G P+ Y+ L+ G C
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK- 260
++EA + M KG + V +L+ C +I A +LE+++ +GL +
Sbjct: 377 ISEALKIRDDML----SKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQG 432
Query: 261 ----------------SRRHRI------DLCP------------CNDGEDIEGAKSLINE 286
+ H I +L P C G+ E A L
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE-AVELWCR 491
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L +G +P++ + +A+ L G + E K+L +M +G + Y ++ K+G
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V E E ++EEMVK P + +N+LL GLC+A A + K G V N TY
Sbjct: 552 VKEGFE-LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN-GYVPNVYTY 609
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
G+++DG C+ + E +L E++ + YN LIR C G A ++M S
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669
Query: 467 QAKLPDISVWSSLVASVC 484
+ L + +SSL+ +C
Sbjct: 670 RGVLLSCATYSSLMHGLC 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
V + KG +PSL L++L K + ++ EV + + G +P V +++ ++
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDF-ICLGGIIPDVHLFSTMINAF 266
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A+ KM K +G N TY ++ GLC+ GR EA R E+M+ P
Sbjct: 267 CKGHREDDAIGLFSKMEK-LGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPS 325
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TY+V I GL + K EA L+EM +P+ V+++L+ C
Sbjct: 326 LITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC 372
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G PSL + + + L + + +V D + G P + ++ + A K D+
Sbjct: 215 KGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDD 274
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ + +M K P V YN ++ GLC +G A + +KM K+ + TY +
Sbjct: 275 AIGLF-SKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE-KVSPSLITYSVF 332
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GL + + EA+ VL+EM + P YN LI G C +G EA+ ++M+S+
Sbjct: 333 INGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392
Query: 470 LPDISVWSSLVASVC 484
P+ +SL+ C
Sbjct: 393 SPNSVTLNSLIQGFC 407
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 172/399 (43%), Gaps = 15/399 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y A + EA ++ + + + F ++ N +L + K K+ AA F
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSM 220
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + + ++L++ L + A + QE GC D +Y ++ L ++++ EA
Sbjct: 221 PVSA--ATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L+ +I+ G I Y LL LC G++++A+ +L KI+ G
Sbjct: 279 VALME----KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 334
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + E K L E RG Y+A+ L G+I + V M +
Sbjct: 335 LIDGLGKEKRSFEAYK-LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V + L K G + A+ + + +G P VY+ L+ GLC A
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDC 452
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ L +M K C + TY IL+DGLC+ G A +EML P V TYN+LI
Sbjct: 453 ALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G A L++M S V+SSLV +C
Sbjct: 512 SGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGLC 545
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 201/478 (42%), Gaps = 53/478 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T + + K L A+ F+ + P + ++ +I L ++ + +
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV---SAATFSILINGLVKAGMMIQAH 244
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ + + C + + A+ ++ EAV+L + ++ C ++N LL +
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +LE A I LR + + L+D L + +RS A +F+EM +G D
Sbjct: 305 CKMGRLEEA-IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y L++GL ++ +A+ S++ ++ G D+V T++ L G+I A+
Sbjct: 364 TVCYTALIRGLLQTGKIPQAS----SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 419
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+I + + +GL P+ YSA+
Sbjct: 420 RIFKSMEARGLA------------------------------------PNEVVYSALIHG 443
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L ++ ++L +M+ P + Y + L K G V EA +EM++ P
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV-EAARAFFDEMLEAGCKP 502
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V YNIL+ GLC AGN+ A L MS ++ Y LVDGLC+ G+ LE +
Sbjct: 503 DVYTYNILISGLCKAGNTDAACGVLDDMS------SSRFVYSSLVDGLCKSGK-LEGGCM 555
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L + RS +T LI LC + EAV L I + +P ++S+++++
Sbjct: 556 LFHEMERSGVANSQTRTRLIFHLCKANRVDEAVS-LFNAIRKEGMPHPYAYNSIISAL 612
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 188/439 (42%), Gaps = 26/439 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L+++ +I E +++++ + C + + + + G+L EA+ L + +
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL-----LMDVL 161
C ++ +L+ + KE + A+ LF E+ SR +L+ L+ L
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF------KEMASRGLALDTVCYTALIRGL 374
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
Q + A V++ M GC PD + ++ GL R+ A + SM +G
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM----EARGL 430
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ V+Y L+ LC K+ A+++L + ++K P + + I + D+E A+
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQ-MKKAFCTPDTITYNILIDGLCKSGDVEAAR 489
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ +E L G P + +Y+ + L G VLD+M + F +Y + + L
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGL 544
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G ++ + E G V + L+ LC A AV + K+ +
Sbjct: 545 CKSGKLEGGCMLFHEMERSG--VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE--GMP 600
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ Y ++ L + G+ E V +EM R + P TYN L+ G+ + A +
Sbjct: 601 HPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYY 659
Query: 462 EEMISQAKLPDISVWSSLV 480
EM + +P +S+ L
Sbjct: 660 LEMTGRGYVPPVSILHKLA 678
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 138/331 (41%), Gaps = 44/331 (13%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N L+DV + +R A ++ + PD E++++L+ G C R EA ++
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIR 178
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M G + + +L LC GK+ AM E + R
Sbjct: 179 EME---EDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS---------------- 219
Query: 271 CNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+P S A++S + L G +++ + E T G
Sbjct: 220 ----------------------MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTI 257
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ Y A + L K+ + EA+ ++E+ G PT+ YN LL GLC G A+
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGC-TPTIATYNALLNGLCKMGRLEEAIDL 316
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L+K+ GC + TY L+DGL ++ R EA ++ +EM R Y LIRGL
Sbjct: 317 LRKIVDN-GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 375
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GK +A + M S +PD+ S+++
Sbjct: 376 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 406
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF S+ A L + EA +++ E+ F P V +N+L+ G C A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELAT-IFRPDVETWNVLITGYCLAREPEE 172
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +++M + G + +T+ +++ GLC+ G+ L A E + RS T+++LI
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILI 231
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GL G +A +E + DI ++++V
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIV 266
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 134/371 (36%), Gaps = 93/371 (25%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFK--EAKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T + + + K A++IFK EA+ PN VY+++I L ++ ++
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE----VVYSALIHGLCKARKMDC 452
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
E++ QMK C + I ++G + A + F + + C
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC------------ 500
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
K + + N+L+ LC+ +D A V +M
Sbjct: 501 ------------------------KPDVYTYNILISGLCKAGNTDAACGVLDDMS----- 531
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT-LLFALCDQGKIQ 242
R Y L+ GLC +L L + M + SG RT L+F LC ++
Sbjct: 532 SSRFVYSSLVDGLCKSGKLEGGCMLFHEM------ERSGVANSQTRTRLIFHLCKANRVD 585
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A+ + I ++G+ P +Y+++
Sbjct: 586 EAVSLFNAIRKEGMPHPY-------------------------------------AYNSI 608
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
L G++ EG V EM T+ + P V Y A L + +D A EM
Sbjct: 609 ISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRA-HYYYLEMTGRG 666
Query: 363 FVPTVRVYNIL 373
+VP V + + L
Sbjct: 667 YVPPVSILHKL 677
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 180/437 (41%), Gaps = 43/437 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI + + +V +QM + CE ++T I +G++NEA L
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL---- 307
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++EM+ L AH +C G + LC
Sbjct: 308 ---------------IREMILHGILPTAH-----TCTGPII------------ALCDMGC 335
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F +M +GC P+ +Y L+ GLC L A L F R+S+ G + V
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL----FHRMSRDGVFPNTV 391
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L + +I+ A +L + R G + + C G D + A ++N
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DPKKAMLVMNN 450
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L RG +L +Y+ + + G ++LD MR G P Y + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + E MV P Y L+ G C A L+ M K+ GC N +TY
Sbjct: 511 MESAFGLFNE-MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM-KRSGCRPNVQTY 568
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL + F A + + M+ +P V TY +I GLC G A+ +MI
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 467 QAKLPDISVWSSLVASV 483
Q LP++ +SSL+ ++
Sbjct: 629 QGCLPNLLTYSSLIRAL 645
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 56/425 (13%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQ 175
+N ++ + K+ + A + + +E + + +L CR+ DL AL VF
Sbjct: 218 YNAVINALCKDGNVADAETIMKKV---FESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR----ISQKGSGEDIVIYRTL 231
+M +GC P+ +Y L+ GLC+ R+NEA L+ M + +G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP-------- 326
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ ALCD G +DA ++ + KG + + C G ++ A L + G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRMSRDG 385
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P+ +Y+A+ L RI VL+ M G P++V Y + G +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK-------------------- 391
V+ + +G V YN ++KG CD+GN+ A+ L
Sbjct: 446 LVMNNMLQRGHSANLV-TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 392 --KMSKQV------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
K+SK G N TY L+DG C+D + A+ +LE M P
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD---LNVCR 494
V+TYNVLI GL A + MI + P++ +++++ +C N + L +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 495 KTLEQ 499
K +EQ
Sbjct: 625 KMIEQ 629
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 191/467 (40%), Gaps = 36/467 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I IL E+ RI V++ M + C + I+ Y G +A+ +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLC 162
N+ Q ++NT++K +A IL L G K S L+ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG--CKPDEWSYTELICGFC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A +F EM G P+ +Y L+ G C D +L+ AT LL M + G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM----KRSGCR 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ L Q A ++ + ++ +G+ + C +G A
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS-TSLALE 621
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ N+ + +G +P+L +YS++ L EG++ E + + E+ G P + Y + A
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL--------------------CDAG- 381
G V+ A + M+K PT+ Y +L+KGL C G
Sbjct: 682 MSGKVEHAFNFL-GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740
Query: 382 ----NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AV+VM K G + LV L GR+ EA+ +L M+ + P
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSV--QVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E YN L+ L + A+ + M +Q ++ + L+ ++C
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 28/412 (6%)
Query: 74 DSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + V TA I Y + +L+ A SL +++ + C Q++N L+ + K++
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + + ++D LC+ + LAL +F +M QGC P+ +Y L
Sbjct: 583 GAEEL-CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++ L + ++ EA +L F + + G D + Y ++ A GK++ A L +++
Sbjct: 642 IRALGQEGKVEEAENL----FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR----GGIPSLASYSAMAIDLYN 308
+ G + P + + + K L NE L+ +P + + +
Sbjct: 698 KAGCQ-PTLWTYGVLI------------KGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + L E+ G S+ + A ++ L G EA E++ + +G P
Sbjct: 745 QDAVSVMSAKLAEL-DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQG-LCPDQE 800
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN LL L N +A+ K MS Q GC + Y L+ LC+ R EA E
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQ-GCEVHLNGYKELICALCQLHRRKEARITFEN 859
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML+R++ P VLI GL G + + +L M ++ +P +++ L
Sbjct: 860 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
L +YSA+ I L G M ++G P+L++Y A + AL KDG V +A E I
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-ETIM 238
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+++ + P Y ++ G C + A+ +M+K+ GC N TY L++GLC
Sbjct: 239 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCD 297
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR EA ++ EM++ P T I LC +G +A +M ++ P++
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 476 WSSLVASVC 484
+++L++ +C
Sbjct: 358 YTALISGLC 366
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 156/316 (49%), Gaps = 9/316 (2%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
+++ +E++F G D S IL+ C+ R++ S+ +I + G IV +
Sbjct: 81 VVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFG----LSVLSKILKLGLEPSIVTFT 136
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TLL LC +GK+ M + + +L +GL+ P + + + + A + +
Sbjct: 137 TLLNGLCMEGKMDQVMMLYDDMLVRGLQ-PNVYTYNVIINSLSKSGKANEALGFLKQMEK 195
Query: 290 RGGIPSLASYSAMAIDLYN-EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G +P++ +YS + ID Y G++ E V D M +KG P++ Y + + K ++
Sbjct: 196 VGCVPNVVNYSTL-IDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA+++++E + KG VP + + ++ GLC AG A + + G N TYG+
Sbjct: 255 EAVQLLDETLRKG-LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH-GHTPNIMTYGV 312
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DGLC+ G EA + +EM + P + Y +LI LC GK + +I +
Sbjct: 313 LLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 469 KLPDISVWSSLVASVC 484
P++ +++LV ++C
Sbjct: 373 LKPNVYTYTALVGALC 388
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 16/349 (4%)
Query: 140 RSCYGWEVKSRIQSLNL---------LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
R +G V S+I L L L++ LC + D + ++ +M +G P+ +Y+
Sbjct: 112 RVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYN 171
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+++ L + NEA L M + G ++V Y TL+ C +G++ +A + +
Sbjct: 172 VIINSLSKSGKANEALGFLKQM----EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDL 227
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
++ KG P + + E IE A L++E L +G +P + +++ + L G
Sbjct: 228 MVSKGC-TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAG 286
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
R + ++ + G P+++ Y L L K G ++EA + +E M + T P + +Y
Sbjct: 287 RPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQE-MQRSTVKPNLVIY 345
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
IL+ LC G ++ + G N TY LV LC++G +EA ++ +M
Sbjct: 346 TILIDSLCKCGKIKDGKELFSRLIDE-GLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
P YNV+I+G A +EEM+++ D + + L
Sbjct: 405 EDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 157/354 (44%), Gaps = 8/354 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ I SL++L++ C R D L V ++ G P ++ L+ GLC + ++++
Sbjct: 93 IEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVM 152
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L M R G ++ Y ++ +L GK +A+ L+++ + G +
Sbjct: 153 MLYDDMLVR----GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTL 208
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ ++ A+S+ + + +G P++ +Y+++ RI E ++LDE KG
Sbjct: 209 IDGYCLRGQ-MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V + ++ L + G A ++ G P + Y +LL GLC GN A
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHG-HTPNIMTYGVLLDGLCKHGNLEEA 326
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++M + N Y IL+D LC+ G+ + + ++ P V TY L+
Sbjct: 327 FALFQEMQRST-VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVG 385
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
LC G EA +M PD ++ ++ D ++ R+ +E++
Sbjct: 386 ALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF-LQHKDPSMARQLVEEM 438
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 8/318 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F TLL + E K++ +L+ ++ + + N++++ L + +++ AL ++
Sbjct: 134 TFTTLLNGLCMEGKMDQVMMLY-DDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQ 192
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ GC P+ +Y L+ G C +++EA S+F + KG ++ Y +L+ C
Sbjct: 193 MEKVGCVPNVVNYSTLIDGYCLRGQMDEAR----SVFDLMVSKGCTPNVYTYTSLMNGYC 248
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+I++A+Q+L++ LRKGL I C G + A+ L G P++
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPL-AAQQLFRYICAHGHTPNI 307
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y + L G + E + EM+ P+LV+Y + +L K G + + E+
Sbjct: 308 MTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSR 367
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+ +G P V Y L+ LC G A +KM + GC + Y +++ G +
Sbjct: 368 LIDEG-LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED-GCTPDKCAYNVIIQGFLQH 425
Query: 417 GRFLEASRVLEEMLIRSY 434
A +++EEM+ R +
Sbjct: 426 KDPSMARQLVEEMVNRGF 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 41/318 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I LS+S + E + QM+ C ++T I Y GQ++EA S+F
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ C ++ +L+ K ++E A + L + I + ++ LC+
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEA-VQLLDETLRKGLVPDIVTFTTIISGLCR 284
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A +F+ + G P+ +Y +L+ GLC L EA +++F + +
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA----FALFQEMQRSTVKP 340
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++VIY L+ +LC GKI+D ++ +++ +GLK
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK-------------------------- 374
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+A+ L EG I+E K+ +M G P Y + +
Sbjct: 375 ----------PNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424
Query: 344 DGMVDEALEVIEEEMVKG 361
A +++EE + +G
Sbjct: 425 HKDPSMARQLVEEMVNRG 442
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 195/442 (44%), Gaps = 50/442 (11%)
Query: 10 TPTYLSQIIKKQKSP-LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
T +SQI+ + S + A +F AK + +Y H +Y MI IL + + + M ++
Sbjct: 87 TNELVSQILMRFDSHCVVAFGVFIWAKNQ-TSYVHTPELYDYMIDILGKFKKFSLMWSLV 145
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+QMKG + + + +R A+A + +A+ +F+ + ++ ++ N L+ +VKE
Sbjct: 146 EQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKE 205
Query: 129 SKLEAAHILFL--RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+E AH FL + C + S N+L+ C+ R +A + +EM+ G +PD
Sbjct: 206 GDVEDAHSAFLEFKDCITLDS----SSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDV 261
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
SY + C + ++F + +KG +++ Y T++ AL ++ +A++
Sbjct: 262 VSYSCFIAAYCEQKDFRNVE----AVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALE 317
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ EK+ R G +P YS++ L
Sbjct: 318 VYEKMKRNGC------------------------------------LPDSKFYSSLIYVL 341
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GRI + V ++M +G +L +Y +++ AL+++ E M + P
Sbjct: 342 SQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLL-ERMEGDSCKPD 400
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V+ Y LLK C + + L M K V G TY +LV+ CR+G+ A
Sbjct: 401 VKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLG-TYTLLVNEFCRNGKLEHACFYF 459
Query: 427 EEMLIRSYWPCVETYNVLIRGL 448
+E +++ P V+T+ L+ L
Sbjct: 460 QEAVLKGMVPMVKTFKALVEEL 481
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 19/300 (6%)
Query: 210 YSMFWRISQKGSGED----IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+S+ W + ++ G + + ++ L K +DA+ + I + G + +
Sbjct: 138 FSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNV 197
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI-VEGDKVLDEMRT 324
+ +G D+E A S E + I +S + I Y + R+ V K+++EM
Sbjct: 198 LMDALVKEG-DVEDAHSAFLE--FKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEK 254
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
GF P +V Y +AA + V +E KG P V Y ++ L A
Sbjct: 255 HGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGC-KPNVITYTTVMHALGKARQLN 313
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM----LIRSYWPCVET 440
A+ +KM K+ GC+ + + Y L+ L + GR +A V E+M + R+ W
Sbjct: 314 EALEVYEKM-KRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLW----V 368
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
YN +I C+ + A+ LE M + PD+ ++ L+ +CC + + + L +
Sbjct: 369 YNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLL-KMCCRRKSIKLLKFLLSHM 427
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 181/407 (44%), Gaps = 20/407 (4%)
Query: 80 DSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
D+V T I+ GQ+ +A+ L S+ TL+ + K + AA I
Sbjct: 132 DTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAA-IQL 190
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
LR G + + N ++D LC+ + A ++F EM +G + +Y ++ G C
Sbjct: 191 LRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCI 250
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+L EA L M K D+ IY TL+ AL +GK+++A +L I++ LK
Sbjct: 251 VGKLTEALGFLNEMVL----KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKP 306
Query: 259 PKSRRHRIDLCPCNDGEDIEG-AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + I+G AK + N + G P + SY+ M L R+ E
Sbjct: 307 NVITYNTL----------IDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALN 356
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ EM K P+ V Y + + L K G + A ++I+E +G V YN L+ GL
Sbjct: 357 LYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA-NVITYNSLINGL 415
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL-CRDGRFLEASRVLEEMLIRSYWP 436
C G A+ + KM Q G + T IL+ GL C+ R A + +++L + Y P
Sbjct: 416 CKNGQLDKAIALINKMKDQ-GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHP 474
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V TYN++I G C G EA +M P+ + ++ ++
Sbjct: 475 NVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICAL 521
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 32/359 (8%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+LN+L++ C + +LA V ++ G PD + L+KGLC ++ +A H
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHF---- 155
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
++ +G D V Y TL+ +C G+ + A+Q+L +I + + + I C C
Sbjct: 156 HDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCK 215
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ + A +L +E ++G ++ +YSA+ G++ E L+EM K P +
Sbjct: 216 R-KLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVY 274
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM---- 388
+Y + AL K+G V EA V+ +VK P V YN L+ G +AV +M
Sbjct: 275 IYNTLVDALHKEGKVKEAKNVLAV-IVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTP 333
Query: 389 ----------------------YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
L K Q V N TY L+DGLC+ GR A ++
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+EM R + V TYN LI GLC G+ +A+ + +M Q PD+ + L+ + C
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 161/345 (46%), Gaps = 32/345 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I L + ++E + +M ++ I + G+L EA+ F
Sbjct: 202 NVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG-F 260
Query: 104 KNLSQFNCVNW-TQSFNTLLKEMVKESKL-EAAHIL--FLRSCY------------GWE- 146
N +N +NTL+ + KE K+ EA ++L +++C G+
Sbjct: 261 LNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK 320
Query: 147 ----------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
V + S N++++ LC+ +R + AL++++EM + P+ +Y+ L+ GL
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C R++ A L+ M R G +++ Y +L+ LC G++ A+ ++ K+ +G+
Sbjct: 381 CKSGRISYAWDLIDEMHDR----GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + + G+ ++ A+ L + L +G P++ +Y+ + EG + E
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ +M G P+ + ++ + AL + G D+A +++ E + +G
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+ R+ K D L+ C G+I A +L KIL+ G + +
Sbjct: 84 SLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGL 143
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G+ ++ A ++ L +G SY + + G ++L + + P+
Sbjct: 144 CLKGQ-VKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPN 202
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+VMY + L K +V EA + E VKG V Y+ ++ G C G A+ +L
Sbjct: 203 VVMYNTIIDCLCKRKLVSEACNLFSEMSVKG-ISANVVTYSAIIHGFCIVGKLTEALGFL 261
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG--- 447
+M + + Y LVD L ++G+ EA VL ++ P V TYN LI G
Sbjct: 262 NEMVLK-AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK 320
Query: 448 ------------------------LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LC I + EA+ +EM + +P+ ++SL+ +
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380
Query: 484 C 484
C
Sbjct: 381 C 381
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 200/455 (43%), Gaps = 10/455 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI + + + + + ++MK + + I + + G+L++ V F+ +
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N L+ K KL + F R G +K + S + L+D C+
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIG-LEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L++A L M Q G ++V
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML----QVGVEWNVV 438
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LCD ++++A ++ K+ G+ P + + ++++ A L+NE
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGV-IPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P L Y L + +I V++EM+ G + ++Y + A FK G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E L +++E M + TV + +L+ GLC + AV Y ++S G AN +
Sbjct: 558 PTEGLHLLDE-MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++DGLC+D + A+ + E+M+ + P Y L+ G G EA+ ++M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 467 QAKLPDISVWSSLVASVC-CNTADLNVCRKTLEQL 500
D+ ++SLV + CN L R LE++
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCN--QLQKARSFLEEM 709
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 224/526 (42%), Gaps = 57/526 (10%)
Query: 9 LTPTYLSQI-IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P ++ ++ ++ ++ P A K FK + + ++H+ Y + IL + + V
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 68 IDQM---KGDSCECKD-------------SVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+ +M K D C+ D VF G L EA+ F + +F
Sbjct: 165 LKEMVLSKAD-CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
T+S N LL K K + F + G + + + N+++D +C+ + A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVK-RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------------- 212
+F+EM F+G PD +Y+ ++ G RL++ M
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 213 -----------FWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
F+R KG+G ++V Y TL+ A C +G +Q A++ + R GL
Sbjct: 343 CKFGKLPIGLEFYR-EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A L NE L G ++ +Y+A+ L + R+ E +++
Sbjct: 402 EYTYTSLIDANCKIG-NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M T G P+L Y A + K +D ALE++ E +G P + +Y + GLC
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCS 519
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + + +M K+ G AN Y L+D + G E +L+EM V
Sbjct: 520 LEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
T+ VLI GLC +AV + + + L + +++++++ +C
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L + L K K+ AL++ E K + + + +Y + I L +I K
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGR--GIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+++MK + ++ T + Y ++G E + L + + + +F L+ +
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + A F R + +++ ++D LC+ + + A +F++M +G PD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R +Y LM G + EA L M ++ G D++ Y +L++ L ++Q A
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKM----AEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 246 QILEKILRKGL 256
LE+++ +G+
Sbjct: 704 SFLEEMIGEGI 714
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 139/313 (44%), Gaps = 11/313 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ R+ E +E+ +M + + I + +A ++ A+ L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVL 161
L + T + + K+EAA ++ ++ C G + S I + LMD
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTT--LMDAY 552
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-G 220
+ LH+ EM ++ +L+ GLC ++ +++A F RIS G
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV----DYFNRISNDFG 608
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ I+ ++ LC +++ A + E++++KGL ++ + G +E A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE-A 667
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L ++ G L +Y+++ L + ++ + L+EM +G P V+ + L
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 341 LFKDGMVDEALEV 353
++ G +DEA+E+
Sbjct: 728 HYELGCIDEAVEL 740
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 149/399 (37%), Gaps = 75/399 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + ++ E +MKG+ + ++T + + + G + +A+ + ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ V ++ +L+ K L A L L+ W V + L+D LC
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV----VTYTALIDGLCD 449
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------- 209
R A +F +MD G P+ SY+ L+ G + ++ A LL
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 210 YSMF-W----------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK-- 250
Y F W + + G + +IY TL+ A G + + +L++
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 251 ------------ILRKGLKAPKSRRHRIDLCP----------------------CNDGED 276
+L GL K +D C D +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ- 628
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E A +L + + +G +P +Y+++ + +G ++E + D+M G L+ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ L + +A +EE + +G V ++L K
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 198/435 (45%), Gaps = 43/435 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S++ L + + ++++D MK D E + I Y R +++A SL++
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE--- 268
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
EMV++ L + +L+ L+ LC+ R
Sbjct: 269 ----------------EMVRKGVL-----------------PDVVTLSALVGGLCKDGRF 295
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F+EM+ G P+ +Y +L+ L +R NE+ LL + +G D+++
Sbjct: 296 SEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLL----GEVVSRGVVMDLIM 351
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC +GKI +A + L P + + + +++GA+ +++E
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDN-HTPNGVTYTVLIDALCKAGNVDGAEQVLSEM 410
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P++ ++S++ L G + + + EM+ +G P++V Y + FK
Sbjct: 411 EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ 470
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+ AL+V E + +G V + + L+ GL G A ++M+++ G + + Y
Sbjct: 471 EAALDVYHEMLCEGVEVNKF-IVDSLVNGLKKNGKIEKAEALFREMNER-GVLLDHVNYT 528
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+DGL + G A +V +E+ ++ P YNV I LC +GK EA +LEEM S
Sbjct: 529 TLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST 588
Query: 468 AKLPDISVWSSLVAS 482
PD +++++A+
Sbjct: 589 GLKPDQVTYNTMIAA 603
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 190/431 (44%), Gaps = 35/431 (8%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V +M + E + + + + G++ +A +LF+ +++ + ++ TL+ +
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV---------LCQCRRSDLALHVFQE 176
K L AA ++V + NLL D LC +S A +E
Sbjct: 535 FKTGNLPAA----------FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEE 584
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G PD+ +Y+ ++ + + +A LL M R S K +++ Y TL+ L
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM-KRSSIK---PNLITYSTLIVGLF 640
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PS 295
+ G ++ A +L ++ G +P S HR L C+ G + I+E ++ G+
Sbjct: 641 EAGAVEKAKYLLNEMSSSGF-SPTSLTHRRVLQACSQGRRSDLILE-IHEWMMNAGLCAD 698
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ Y+ + L G + VL+EM +G P + + A + FK G +D A +
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ + G P V +N LL GL AG + M L +M K+ G + TY ILV G +
Sbjct: 759 QMLYHG-ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKR-GIEPSNLTYDILVTGYGK 816
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD--- 472
+EA R+ EM+ + + P V TYN LI +G +A EM ++ LP
Sbjct: 817 QSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCT 876
Query: 473 ----ISVWSSL 479
+S WS L
Sbjct: 877 YDILVSGWSKL 887
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 216/493 (43%), Gaps = 56/493 (11%)
Query: 33 EAKEKY-----PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EAK+ + N+ NG Y +I L ++ + ++V+ +M+ S F++ I
Sbjct: 367 EAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSII 426
Query: 88 RTYARAGQLNEAVSLFKNLSQF----NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ G + +A + + + N V + + K + +E+ L+ H + C
Sbjct: 427 NGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML---CE 483
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G EV I ++ L++ L + + + A +F+EM+ +G D +Y L+ GL L
Sbjct: 484 GVEVNKFI--VDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A + + +++K D V+Y + LC GK ++A LE++ GLK +
Sbjct: 542 AA----FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY 597
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + +G+ + K L + R I P+L +YS + + L+ G + + +L+EM
Sbjct: 598 NTMIAAQSREGKTAKALKLL--NGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM 655
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ GF P+ + + L A + D LE I E M+ + VYN L++ LC G
Sbjct: 656 SSSGFSPTSLTHRRVLQACSQGRRSDLILE-IHEWMMNAGLCADITVYNTLVRVLCYNGM 714
Query: 383 SAVAVMYLKKMSKQV----------------------------------GCVANGETYGI 408
+ A++ L++MS + G N T+
Sbjct: 715 TRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNT 774
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GL GR E+ VL EM R P TY++L+ G + EAV EM+ +
Sbjct: 775 LLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKG 834
Query: 469 KLPDISVWSSLVA 481
LP +S +++L++
Sbjct: 835 FLPKVSTYNALIS 847
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 189/454 (41%), Gaps = 48/454 (10%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T + + K P A K+ +E EK N + VY I L + E + +++M
Sbjct: 529 TLIDGLFKTGNLP-AAFKVGQELTEK--NLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
+ + + T I +R G+ +A+ L + + + +++TL+ + + +
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAV 645
Query: 132 EAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
E A ++L S G+ S ++ Q RRSDL L + + M
Sbjct: 646 EKAKYLLNEMSSSGFSPTSLTH--RRVLQACSQGRRSDLILEIHEWM------------- 690
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
+ GLC DI +Y TL+ LC G + AM +LE+
Sbjct: 691 -MNAGLC-------------------------ADITVYNTLVRVLCYNGMTRKAMVVLEE 724
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +G+ + + L G ++ A S ++ L G P++A+++ + L + G
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSGH-LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
RI E D VL+EM+ +G PS + Y+ + K EA+ + E + KG F+P V Y
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKG-FLPKVSTY 842
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N L+ G + A +M + G + TY ILV G + E + L++M
Sbjct: 843 NALISDFSKVGMMSQAKELFNEMQNR-GVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMK 901
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ + P T + + R G +EA L+ +
Sbjct: 902 EKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 8/365 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS-RIQSLNLLMDVLCQCRRSDLALHVFQ 175
+ NT+L + ++ +++ A L G + + N L+D C+ + A V +
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
M QG D Y+ L+ GLC ++ A ++ +M + G ++V Y +
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM----KRDGVEPNVVTYTMFIVEY 254
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C + + DA + E+++RKG+ + C DG E A +L E G P+
Sbjct: 255 CRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE-AYALFREMEKIGAAPN 313
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y + L R E +L E+ ++G L+MY A + L K+G +DEA ++
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+ P Y +L+ LC AGN A L +M ++ N T+ +++GL +
Sbjct: 374 HAL-SDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK-SISPNVVTFSSIINGLVK 431
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G +A+ + EM R P V TY +I G Q A+ EM+ + + +
Sbjct: 432 RGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFI 491
Query: 476 WSSLV 480
SLV
Sbjct: 492 VDSLV 496
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 20/307 (6%)
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY+++M G L ++ + ++G D V T+L LC G++ A
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-----ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRA 156
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSLA 297
+ E ++R G +D+ N DG D+E A ++ +G +
Sbjct: 157 AALAEVMVRGGGIGG------LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVV 210
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
Y+++ L G + ++D M+ G P++V Y + + VD+A + EE
Sbjct: 211 GYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFS-LYEE 269
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
MV+ +P V + L+ GLC G + A ++M K +G N TY +L+D L +
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK-IGAAPNHVTYCMLIDTLAKAQ 328
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R E+ +L E++ R + Y L+ LC GK EA +S P+ ++
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388
Query: 478 SLVASVC 484
L+ ++C
Sbjct: 389 VLIDALC 395
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G+ EAL + E +G V V N +L GLC G A + M + G +
Sbjct: 116 QGGLAPEAL--LAEMCKRGVPFDAVTV-NTVLVGLCRDGRVDRAAALAEVMVRG-GGIGG 171
Query: 403 GETYG--ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ G LVDG C+ G A V E M + V YN L+ GLC G+ A
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231
Query: 461 LEEMISQAKLPDISVWSSLVASVCCNTA 488
++ M P++ ++ + C A
Sbjct: 232 VDTMKRDGVEPNVVTYTMFIVEYCRRNA 259
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 180/437 (41%), Gaps = 43/437 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI + + +V +QM + CE ++T I +G++NEA L
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL---- 307
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++EM+ L AH +C G + LC
Sbjct: 308 ---------------IREMILHGILPTAH-----TCTGPII------------ALCDMGC 335
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A +F +M +GC P+ +Y L+ GLC L A L F R+S+ G + V
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL----FHRMSRDGVFPNTV 391
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ L + +I+ A +L + R G + + C G D + A ++N
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG-DPKKAMLVMNN 450
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L RG +L +Y+ + + G ++LD MR G P Y + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ A + E MV P Y L+ G C A L+ M K+ GC N +TY
Sbjct: 511 MESAFGLFNE-MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM-KRSGCRPNVQTY 568
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ GL + F A + + M+ +P V TY +I GLC G A+ +MI
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 467 QAKLPDISVWSSLVASV 483
Q LP++ +SSL+ ++
Sbjct: 629 QGCLPNLLTYSSLIRAL 645
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 56/425 (13%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQ 175
+N ++ + K+ + A + + +E + + +L CR+ DL AL VF
Sbjct: 218 YNAVINALCKDGNVADAETIMKKV---FESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR----ISQKGSGEDIVIYRTL 231
+M +GC P+ +Y L+ GLC+ R+NEA L+ M + +G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP-------- 326
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ ALCD G +DA ++ + KG + + C G ++ A L + G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG-ILKVAIGLFHRMSRDG 385
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P+ +Y+A+ L RI VL+ M G P++V Y + G +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK-------------------- 391
V+ + +G V YN ++KG CD+GN+ A+ L
Sbjct: 446 LVMNNMLQRGHSANLV-TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 392 --KMSKQV------------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
K+SK G N TY L+DG C+D + A+ +LE M P
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD---LNVCR 494
V+TYNVLI GL A + MI + P++ +++++ +C N + L +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 495 KTLEQ 499
K +EQ
Sbjct: 625 KMIEQ 629
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 191/467 (40%), Gaps = 36/467 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I IL E+ RI V++ M + C + I+ Y G +A+ +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLC 162
N+ Q ++NT++K +A IL L G K S L+ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG--CKPDEWSYTELICGFC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + + A +F EM G P+ +Y L+ G C D +L+ AT LL M + G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM----KRSGCR 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ L Q A ++ + ++ +G+ + C +G A
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS-TSLALE 621
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ N+ + +G +P+L +YS++ L EG++ E + + E+ G P + Y + A
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL--------------------CDAG- 381
G V+ A + M+K PT+ Y +L+KGL C G
Sbjct: 682 MSGKVEHAFNFL-GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740
Query: 382 ----NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AV+VM K G + LV L GR+ EA+ +L M+ + P
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSV--QVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
E YN L+ L + A+ + M +Q ++ + L+ ++C
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 28/412 (6%)
Query: 74 DSCECKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D C + V TA I Y + +L+ A SL +++ + C Q++N L+ + K++
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A L + + + + ++D LC+ + LAL +F +M QGC P+ +Y L
Sbjct: 583 GAEEL-CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++ L + ++ EA +L F + + G D + Y ++ A GK++ A L +++
Sbjct: 642 IRALGQEGKVEEAENL----FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR----GGIPSLASYSAMAIDLYN 308
+ G + P + + + K L NE L+ +P + + +
Sbjct: 698 KAGCQ-PTLWTYGVLI------------KGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+ + L E+ G S+ + A ++ L G EA E++ + +G P
Sbjct: 745 QDAVSVMSAKLAEL-DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQG-LCPDQE 800
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN LL L N +A+ K MS Q GC + Y L+ LC+ R EA E
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQ-GCEVHLNGYKELICALCQLHRRKEARITFEN 859
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML+R++ P VLI GL G + + +L M ++ +P +++ L
Sbjct: 860 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
L +YSA+ I L G M ++G P+L++Y A + AL KDG V +A E I
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-ETIM 238
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+++ + P Y ++ G C + A+ +M+K+ GC N TY L++GLC
Sbjct: 239 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCD 297
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR EA ++ EM++ P T I LC +G +A +M ++ P++
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 476 WSSLVASVC 484
+++L++ +C
Sbjct: 358 YTALISGLC 366
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 191/448 (42%), Gaps = 19/448 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + K ++ +M K ++ I ++ G + +A +LF +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ Q++ +L++ +E + + L + E+K R + ++ +C
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLV------EMKKRNIVISPYTYGTVVKGMC 428
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D A ++ +EM GC P+ Y L+K + R +A +L M ++G
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA 484
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI Y +L+ L ++ +A L +++ GLK P + + + + + A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEASEFASADK 543
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ E G +P+ + + + +G+++E M +G Y + LF
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+ VD+A E+ E KG P V Y +L+ G GN A +M ++ G N
Sbjct: 604 KNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPN 661
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y +L+ G CR G +A +L+EM ++ P TY +I G C G EA +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADL 490
EM + +PD V+++LV CC D+
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG-CCRLNDV 748
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 196/446 (43%), Gaps = 19/446 (4%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y ++I +++R + V+ +MK + + I ++A +++EA S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA--HILFLRSCYGWEVKSRIQSLNLLMD 159
+ + ++ + ++ S+ +A ++ +R C K L ++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL---IN 565
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + A ++ M QG D ++Y +LM GL + ++++A + F + K
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI----FREMRGK 621
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIE 278
G D+ Y L+ G +Q A I ++++ +GL P + + L C GE IE
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGE-IE 679
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
AK L++E ++G P+ +Y + ID Y G + E ++ DEM+ KG P +Y
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTI-IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---S 394
+ + V+ A+ + K + +N L+ + G + + L ++ S
Sbjct: 739 VDGCCRLNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
N TY I++D LC++G A + +M + P V TY L+ G +G++
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
E +E I+ PD ++S ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVII 882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 176/414 (42%), Gaps = 68/414 (16%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+D LC+ +R + A + EMD G D +Y +L+ GL R + A L++ M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 213 FWR---------------ISQKGSGE------DIVI----------YRTLLFALCDQGKI 241
+S++G E D +I Y +L+ C + +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ ++L ++ ++ + + C+ G D++GA +++ E + G P++ Y+
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG-DLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ R + +VL EM+ +G P + Y + + L K +DEA + EMV+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL-VEMVEN 516
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK-------------------------- 395
P Y + G +A A A Y+K+M +
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 396 --------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
G + + +TY +L++GL ++ + +A + EM + P V +Y VLI G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+G +A +EM+ + P++ +++ L+ C + ++ ++ L+++S
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF-CRSGEIEKAKELLDEMS 689
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 162/382 (42%), Gaps = 21/382 (5%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
F L + + +E A +F S G E+ R+ +L+D L + R DL V++ M
Sbjct: 154 FGILFDGYIAKEYIEEAVFVF-SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---FWRISQKGSG-----EDIV--- 226
+ D ++YH+L+ C + +L+ F + G E ++
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272
Query: 227 ------IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
Y L+ LC +++DA +L ++ G+ + + + + + G + + A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV-SLDNHTYSLLIDGLLKGRNADAA 331
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L++E + G Y + EG + + + D M G P Y + +
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
++ V + E++ EM K V + Y ++KG+C +G+ A +K+M GC
Sbjct: 392 YCREKNVRQGYELL-VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCR 449
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N Y L+ ++ RF +A RVL+EM + P + YN LI GL + EA +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 461 LEEMISQAKLPDISVWSSLVAS 482
L EM+ P+ + + ++
Sbjct: 510 LVEMVENGLKPNAFTYGAFISG 531
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 57/454 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC---KDSVFATA-IRTYARAGQLN 97
+ N Y + I E++ + + +M+ EC + V T I Y + G++
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA S ++++ + +++ L+ + K K++ A +F R G + + S +L
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF-REMRGKGIAPDVFSYGVL 633
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ + A +F EM +G P+ Y++L+ G C + +A LL M S
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM----S 689
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCND- 273
KG + V Y T++ C G + +A ++ +++ KGL P S + + C ND
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDV 748
Query: 274 -------GEDIEGAKS---------------------------LINEALIRGGIPSLASY 299
G + +G S L++ + R G P+ +Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M L EG + ++ +M+ P+++ Y + L K G E V +E +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVGCVANGETYGILVDGLCR 415
G P +Y++++ G + A++ + +M + GC + T L+ G +
Sbjct: 869 AG-IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
G A +V+E M+ Y P T LI C
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 154/369 (41%), Gaps = 26/369 (7%)
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS--------DLALHVFQEMDFQGCYPDR 186
H+L + C R ++ L DVL + + D AL + + M +G P +
Sbjct: 225 HMLIIAHC-------RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y +L+ GLC +RL +A LL M G D Y L+ L A
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGED--IEGAKSLINEALIRGGIPSLASYSAMAI 304
++ +++ G+ + + D C C ++ +E AK+L + + G IP +Y+++
Sbjct: 334 LVHEMVSHGINI---KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
E + +G ++L EM+ + S Y + + G +D A +++E + G
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC-R 449
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V +Y L+K A+ LK+M +Q G + Y L+ GL + R EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L EM+ P TY I G + A +++EM LP+ + + L+ C
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 485 CNTADLNVC 493
+ C
Sbjct: 569 KKGKVIEAC 577
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 172/405 (42%), Gaps = 19/405 (4%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
++ G + +A +LF + F +++ +L++ +E + + L + E+K R
Sbjct: 361 SKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLV------EIKKR 414
Query: 151 ---IQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
I V C DL A ++ +EM GC P+ Y L+K R +A
Sbjct: 415 NIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDA 474
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+L M ++G D Y +L+ L K+ +A L +++ G K P + +
Sbjct: 475 VRVLKEM----REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFK-PDAFTYG 529
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ + + A + E L G IP+ + + + +G+++E M +
Sbjct: 530 AFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ 589
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G Y + L K+G V++A E+ E KG P V Y L+ G GN
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG-IAPDVFSYGTLIDGFSKLGNMQK 648
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +M Q G +N Y +L+ G CR G +A +L+EM + + P TY +I
Sbjct: 649 ASSIFDEMV-QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
G C G EA +EM + +PD V+++LV CC D+
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG-CCRLNDV 751
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 204/492 (41%), Gaps = 100/492 (20%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR--------------------- 140
++K + + N V QS+ L+ ++ ++ A + L+
Sbjct: 211 VYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKS 270
Query: 141 -SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
SC G V SR QS NLL+D LC+ +R + A + EM+ G + D +Y IL+ GL
Sbjct: 271 MSCKGL-VPSR-QSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKG 328
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL----------- 248
R + A L++ M G D ++Y + + +G ++ A +
Sbjct: 329 RNADAANGLVHEMV----SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPG 384
Query: 249 -------------EKILRKGLK-APKSRRHRIDLCP----------CNDGEDIEGAKSLI 284
EK +RKG + + ++ I + P C+ G D++GA +++
Sbjct: 385 ARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSG-DLDGAYNIV 443
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E G P++ Y+ + + R + +VL EMR +G P Y + + L K
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK--------- 395
+DEA + EMV+ F P Y + G +AG A A Y+K+M +
Sbjct: 504 KKMDEARSFL-LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVL 562
Query: 396 -------------------------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+ G + + +TY +L++GL ++G+ +A + EM
Sbjct: 563 CTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMR 622
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P V +Y LI G +G +A +EM+ ++ +++ L+ C + ++
Sbjct: 623 GKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGF-CRSGEI 681
Query: 491 NVCRKTLEQLSS 502
++ L+++S
Sbjct: 682 EKAKELLDEMSG 693
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 199/474 (41%), Gaps = 50/474 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + + + S + ++ +M C ++ T I+T+ + + +AV + K +
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS----------CYGWEVKSRIQSLNL 156
+ T +N+L+ + K K++ A L YG + I++
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541
Query: 157 LM----------------DVLCQ------CRRSDL--ALHVFQEMDFQGCYPDRESYHIL 192
VLC C++ + A F+ M QG D ++Y +L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
M GL + ++N+A + + M KG D+ Y TL+ G +Q A I ++++
Sbjct: 602 MNGLVKNGKVNDAEEIFHEM----RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGR 311
+ GL + + + C GE IE AK L++E +G P+ +Y + ID Y G
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGE-IEKAKELLDEMSGKGFPPNAVTYCTI-IDGYCKSGD 715
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE--EEMVKGTFVPTVRV 369
+ E ++ DEM+ KG P +Y + + V+ A+ + E E+ + P
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP---- 771
Query: 370 YNILLKGLCDAGNSAVAVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
+N L+ + G + + + ++ S N TY I++D LC++G A +
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M + P V TY L+ G +G++ E +E+I+ PD ++S ++
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVII 885
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 177/455 (38%), Gaps = 57/455 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC---KDSVFATA-IRTYARAGQL 96
++ + Y + I E+ + + +M EC + V T I Y + G++
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEM----LECGVIPNKVLCTGLINEYCKKGKV 576
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
EA S F+++ + + +++ L+ +VK K+ A +F G + + S
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF-HEMRGKGIAPDVFSYGT 635
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+D + A +F EM G + Y++L+ G C + +A LL M
Sbjct: 636 LIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM---- 691
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
S KG + V Y T++ C G + +A Q+ +++ KGL P S + + C D
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGL-VPDSFVYTTLVDGCCRLND 750
Query: 277 IEGA------------------KSLINEALIRG--------------------GIPSLAS 298
+E A +LIN G G P+ +
Sbjct: 751 VERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVT 810
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ M L EG + ++ M+ P+++ Y + L K G E V +E +
Sbjct: 811 YNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI 870
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVGCVANGETYGILVDGLC 414
G P +Y++++ G + A++ L +M + GC + T L+ G
Sbjct: 871 AAG-IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFA 929
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ G A +V+E M+ Y P T LI C
Sbjct: 930 KVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 191/448 (42%), Gaps = 19/448 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + K ++ +M K ++ I ++ G + +A +LF +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ Q++ +L++ +E + + L + E+K R + ++ +C
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLV------EMKKRNIVISPYTYGTVVKGMC 428
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D A ++ +EM GC P+ Y L+K + R +A +L M ++G
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA 484
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI Y +L+ L ++ +A L +++ GLK P + + + + + A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEASEFASADK 543
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ E G +P+ + + + +G+++E M +G Y + LF
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+ VD+A E+ E KG P V Y +L+ G GN A +M ++ G N
Sbjct: 604 KNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPN 661
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y +L+ G CR G +A +L+EM ++ P TY +I G C G EA +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADL 490
EM + +PD V+++LV CC D+
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG-CCRLNDV 748
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 196/446 (43%), Gaps = 19/446 (4%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y ++I +++R + V+ +MK + + I ++A +++EA S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA--HILFLRSCYGWEVKSRIQSLNLLMD 159
+ + ++ + ++ S+ +A ++ +R C K L ++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL---IN 565
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + A ++ M QG D ++Y +LM GL + ++++A + F + K
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI----FREMRGK 621
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIE 278
G D+ Y L+ G +Q A I ++++ +GL P + + L C GE IE
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGE-IE 679
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
AK L++E ++G P+ +Y + ID Y G + E ++ DEM+ KG P +Y
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTI-IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---S 394
+ + V+ A+ + K + +N L+ + G + + L ++ S
Sbjct: 739 VDGCCRLNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
N TY I++D LC++G A + +M + P V TY L+ G +G++
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
E +E I+ PD ++S ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVII 882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 176/414 (42%), Gaps = 68/414 (16%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+D LC+ +R + A + EMD G D +Y +L+ GL R + A L++ M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 213 FWR---------------ISQKGSGE------DIVI----------YRTLLFALCDQGKI 241
+S++G E D +I Y +L+ C + +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ ++L ++ ++ + + C+ G D++GA +++ E + G P++ Y+
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG-DLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ R + +VL EM+ +G P + Y + + L K +DEA + EMV+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL-VEMVEN 516
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK-------------------------- 395
P Y + G +A A A Y+K+M +
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 396 --------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
G + + +TY +L++GL ++ + +A + EM + P V +Y VLI G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+G +A +EM+ + P++ +++ L+ C + ++ ++ L+++S
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF-CRSGEIEKAKELLDEMS 689
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 175/441 (39%), Gaps = 45/441 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE--------- 132
+F Y G + EAV +F + V LL +++ ++L+
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 133 ----------AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS--------DLALHVF 174
H+L + C R ++ L DVL + + D AL +
Sbjct: 213 VERNVVFDVKTYHMLIIAHC-------RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M +G P + +Y +L+ GLC +RL +A LL M G D Y L+
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSLDNHTYSLLIDG 321
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED--IEGAKSLINEALIRGG 292
L A ++ +++ G+ + + D C C ++ +E AK+L + + G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINI---KPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
IP +Y+++ E + +G ++L EM+ + S Y + + G +D A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+++E + G P V +Y L+K A+ LK+M +Q G + Y L+ G
Sbjct: 439 IVKEMIASGC-RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
L + R EA L EM+ P TY I G + A +++EM LP+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 473 ISVWSSLVASVCCNTADLNVC 493
+ + L+ C + C
Sbjct: 557 KVLCTGLINEYCKKGKVIEAC 577
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 57/454 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC---KDSVFATA-IRTYARAGQLN 97
+ N Y + I E++ + + +M+ EC + V T I Y + G++
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA S ++++ + +++ L+ + K K++ A +F R G + + S +L
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF-REMRGKGIAPDVFSYGVL 633
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ + A +F EM +G P+ Y++L+ G C + +A LL M S
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM----S 689
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCND- 273
KG + V Y T++ C G + +A ++ +++ KGL P S + + C ND
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDV 748
Query: 274 -------GEDIEGAKS---------------------------LINEALIRGGIPSLASY 299
G + +G S L++ + R G P+ +Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M L EG + ++ +M+ P+++ Y + L K G E V +E +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVGCVANGETYGILVDGLCR 415
G P +Y++++ G + A++ + +M + GC + T L+ G +
Sbjct: 869 AG-IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
G A +V+E M+ Y P T LI C
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 198/452 (43%), Gaps = 10/452 (2%)
Query: 7 RLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
R LTP ++IK+ +P K F E N H Y ++ L + +
Sbjct: 36 RQLTPLIAFEVIKRFNNPKVGFK-FLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNI 94
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
V D M D + + A+A + L + + +N LL +V
Sbjct: 95 VFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLV 154
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K++++ A LF + + + N+L+ LC+ D A VF++M+ GC PD
Sbjct: 155 KQNQVHEAIYLF-KEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDV 213
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ GLC + L + S+ DIV Y +++ C GK+++A
Sbjct: 214 VTYNTLINGLCKANEVQRGCELFKEI---QSRSDCSPDIVTYTSIISGFCKSGKMKEASN 270
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ E+++R G++ P + + +I A+++ + + +++++ ID
Sbjct: 271 LFEEMMRSGIQ-PNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSL-IDG 328
Query: 307 Y-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
Y G++ G K + M+T+ P++ Y + AL K+ ++EA + + + + + +P
Sbjct: 329 YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQ-IKNSSIIP 387
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+YN ++ G C AGN + LK+M ++ C + T+ IL+ G C GR EA +
Sbjct: 388 KPFMYNPVIDGFCKAGNVDEGNVILKEMEEK-RCDPDKVTFTILIIGHCVKGRMFEAINI 446
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
ML P T N LI L G EA
Sbjct: 447 FNRMLATRCAPDNITVNSLISCLLKAGMPNEA 478
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 10/350 (2%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ NLLM LCQ DL VF M G PD + L+ + + LL
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL--- 131
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ K + +Y LL L Q ++ +A+ + ++ L P + I +
Sbjct: 132 -AEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQ-SPPDTWTFNILIRGLC 189
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSL 331
++ A + + G +P + +Y+ + L + G ++ E++++ P +
Sbjct: 190 RVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDI 249
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + ++ K G + EA + EE M G P V +N+L+ G GN A A +
Sbjct: 250 VTYTSIISGFCKSGKMKEASNLFEEMMRSG-IQPNVITFNVLIDGFGKIGNIAEAEAMYR 308
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
KM+ C A+ T+ L+DG CR G+ + M R+ P V TY VLI LC
Sbjct: 309 KMA-YFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNTADLNVCRKTLEQ 499
+ EA +L ++ + + +P +++ ++ C N + NV K +E+
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEE 417
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 41/341 (12%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G EV+ N L+ VL + + A+++F+E PD +++IL++GLC ++
Sbjct: 136 GKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVD 195
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A + +F + G D+V Y TL+ LC ++Q ++ ++I +
Sbjct: 196 RA----FEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEI-----------Q 240
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
R D C+ P + +Y+++ G++ E + +EM
Sbjct: 241 SRSD---CS---------------------PDIVTYTSIISGFCKSGKMKEASNLFEEMM 276
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P+++ + + K G + EA E + +M V + L+ G C AG
Sbjct: 277 RSGIQPNVITFNVLIDGFGKIGNIAEA-EAMYRKMAYFDCSADVVTFTSLIDGYCRAGQV 335
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+ + M K TY +L++ LC++ R EA L ++ S P YN
Sbjct: 336 NHGLKFWNVM-KTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNP 394
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+I G C G E + L+EM + PD ++ L+ C
Sbjct: 395 VIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHC 435
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 151/384 (39%), Gaps = 42/384 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N VY +++ +L + N++ E + + F IR R G ++ A
Sbjct: 140 RINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFE 199
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+FK++ F C+ ++NTL+ + K ++++ R C E+ IQS
Sbjct: 200 VFKDMESFGCLPDVVTYNTLINGLCKANEVQ-------RGC---ELFKEIQS-------- 241
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
RSD C PD +Y ++ G C ++ EA++L F + + G
Sbjct: 242 ----RSD-------------CSPDIVTYTSIISGFCKSGKMKEASNL----FEEMMRSGI 280
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+++ + L+ G I +A + K+ A + C G+ G K
Sbjct: 281 QPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLK 340
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
N R P++ +Y+ + L E R+ E L +++ P MY +
Sbjct: 341 -FWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGF 399
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K G VDE VI +EM + P + IL+ G C G A+ +M C
Sbjct: 400 CKAGNVDEG-NVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRM-LATRCAP 457
Query: 402 NGETYGILVDGLCRDGRFLEASRV 425
+ T L+ L + G EA R+
Sbjct: 458 DNITVNSLISCLLKAGMPNEAYRI 481
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 163/333 (48%), Gaps = 10/333 (3%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S L++ LC+ A+ + ++M+ G + +Y+ L++GLC LN++ LL +
Sbjct: 22 SYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKL 81
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-C 271
W KG + Y LL A + + +AM++L++I+ KG + P + + L C
Sbjct: 82 MW----KGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ-PNLVSYNVLLTGLC 136
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+G E A + +G P++ SY+ + L +EGR E +++L EM ++ PSL
Sbjct: 137 KEGR-TEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSL 195
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y + +L G ++ A EV++E MV+ +F P+ YN ++ LC G + + L
Sbjct: 196 VTYNILIGSLAFHGRIEHAFEVLDE-MVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLD 254
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M C N T+ + LC+ GR EA +++ + + + Y +I LC
Sbjct: 255 QMIHH-RCNPNEGTFNAIAV-LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRK 312
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G Y A L EM +PD +SSL+ +C
Sbjct: 313 GNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLC 345
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 204/421 (48%), Gaps = 15/421 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + I +++++M+ + + + +R G LN+++ L L
Sbjct: 23 YTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLM 82
Query: 108 QFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V +++ LL+ KE + EA +L GW+ + S N+L+ LC+ R
Sbjct: 83 WKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ--PNLVSYNVLLTGLCKEGR 140
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ A+ F+++ +G P+ SY+I+++ LC++ R EA LL M + +V
Sbjct: 141 TEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEM----DSEERSPSLV 196
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ +L G+I+ A ++L++++R K + + I C +G+ ++ +++
Sbjct: 197 TYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGK-LDLVIKCLDQ 255
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P+ +++A+A+ L +GR+ E ++ + K + Y+ + +L + G
Sbjct: 256 MIHHRCNPNEGTFNAIAV-LCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGN 314
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGE 404
A +++ E M K FVP Y+ L++GLC G + A+ + L + + + N
Sbjct: 315 TYPAFQLLYE-MTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDN-- 371
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+ L+ G C+ GR + +LE M+ + Y P TY +++ G+ ++ A L+E+
Sbjct: 372 -FNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKEL 430
Query: 465 I 465
+
Sbjct: 431 L 431
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 139/315 (44%), Gaps = 43/315 (13%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A V + M G PD SY L+ LC + A L+ M + G + V Y
Sbjct: 4 ATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKM----EENGYPTNTVTYN 59
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ LC G + ++Q+L+K++ KGL
Sbjct: 60 SLVRGLCMHGNLNQSLQLLDKLMWKGL--------------------------------- 86
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+P+ +YS + Y E + E K+LDE+ KG+ P+LV Y L L K+G +E
Sbjct: 87 ---VPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEE 143
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ + KG F P V YNI+L+ LC G A L +M + + TY IL
Sbjct: 144 AIRFFRDLPSKG-FNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERS-PSLVTYNIL 201
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ L GR A VL+EM+ S+ P TYN +I LC GK + L++MI
Sbjct: 202 IGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRC 261
Query: 470 LPDISVWSSLVASVC 484
P+ +++ +A +C
Sbjct: 262 NPNEGTFNA-IAVLC 275
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 189/405 (46%), Gaps = 15/405 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ + + G + A+ L + + + T ++N+L++ + L + L +
Sbjct: 23 YTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLM 82
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ V + + + L++ + R + A+ + E+ +G P+ SY++L+ GLC + R
Sbjct: 83 WKGLVPNEF-TYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRT 141
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA F + KG ++V Y +L +LC +G+ ++A Q+L ++ + ++P
Sbjct: 142 EEAIRF----FRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEE-RSPSLV 196
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ I + IE A +++E + PS +Y+ + L EG++ K LD+M
Sbjct: 197 TYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQM 256
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P+ + A +A L K G V EA +I+ + T Y ++ LC GN
Sbjct: 257 IHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQN-LGNKQRSSTHDFYKGVITSLCRKGN 314
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF---LEASRVLEEMLIRSYWPCVE 439
+ A L +M+K G V + TY L+ GLC +G LE R+LEE Y P ++
Sbjct: 315 TYPAFQLLYEMTK-FGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEE---NDYRPILD 370
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+N LI G C G+ ++ LE M+ + P+ + ++ +V +
Sbjct: 371 NFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIA 415
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G D Y L+ LC +G I AMQ++EK+ G P N
Sbjct: 13 ESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGY-------------PTN----- 54
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
++ +L+RG L G + + ++LD++ KG P+ Y
Sbjct: 55 ----TVTYNSLVRG--------------LCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFL 96
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L A +K+ V+EA+++++E + KG + P + YN+LL GLC G + A+ + + + +
Sbjct: 97 LEAAYKERGVNEAMKLLDEIIAKG-WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK- 154
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G N +Y I++ LC +GR+ EA+++L EM P + TYN+LI L G+ A
Sbjct: 155 GFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHA 214
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
L+EM+ + P + ++ ++A + C L++ K L+Q+
Sbjct: 215 FEVLDEMVRASFKPSATTYNPIIAHL-CKEGKLDLVIKCLDQM 256
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 213/468 (45%), Gaps = 51/468 (10%)
Query: 58 SNRITEMKEVIDQM--KGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
S R ++++ D++ D + K ++ F +R Y + ++EA+ F + +
Sbjct: 131 STRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPK 190
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T++ N +L + + +++E A + F Y E+KS + + N++++VLC+ + A
Sbjct: 191 TETCNHILSLLSRLNRIENAWV-FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 249
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M+ G P +Y+ L++G R+ A ++ M KG D+ Y +L
Sbjct: 250 GIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM----KSKGFQPDLQTYNPILSW 305
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+C++G+ + ++ ++ I GL P S + I + C++ D+E A + +E + +G +P
Sbjct: 306 MCNEGRASEVLREMKGI---GL-VPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVP 361
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVL----------------------------------- 319
+ +Y+ + L+ E +I E ++L
Sbjct: 362 TFYTYNTLIHGLFMENKI-EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFAL 420
Query: 320 -DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DEM T G P+ Y + + L + EA E+ E+ + KG P + + N L+ G C
Sbjct: 421 HDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG-MKPDLVMMNTLMDGHC 479
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
GN A LK+M + + + TY L+ GLC +G+F EA ++ EM R P
Sbjct: 480 ATGNMDRAFSLLKEMDR-MNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 538
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+YN LI G G A + +EM+S P + +++L+ + N
Sbjct: 539 ISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKN 586
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 13/372 (3%)
Query: 116 QSFNTLLKEMVKESKLEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+S LLKE+V K + + + + KS I + ++ CQ R D A+
Sbjct: 120 KSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTIL-FDFMVRFYCQLRMVDEAIEC 178
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
F M +G P E+ + ++ L R+ A + Y+ +R+ K ++ + ++
Sbjct: 179 FYLMKEKGFDPKTETCNHILSLLSRLNRIENA-WVFYADMYRMEIKS---NVYTFNIMIN 234
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC +GK++ A L + G+K P + + + IEGA+ +I+E +G
Sbjct: 235 VLCKEGKLKKAKGFLGIMESFGIK-PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQ 293
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P L +Y+ + + NEGR E VL EM+ G P V Y + +G ++ A
Sbjct: 294 PDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAF-A 349
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+EMVK VPT YN L+ GL A + ++++ ++ G V + TY I+++G
Sbjct: 350 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI-REKGIVLDSVTYNIVINGY 408
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ G +A + +EM+ P TY LI LC K EA E+++ + PD+
Sbjct: 409 CQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDL 468
Query: 474 SVWSSLVASVCC 485
+ ++L+ C
Sbjct: 469 VMMNTLMDGHCA 480
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 43/350 (12%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV+ +MKG + IR + G L A + + + V ++NTL+ +
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
E+K+EAA IL +E+ +G D
Sbjct: 374 FMENKIEAAEILI------------------------------------REIREKGIVLD 397
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I++ G C +A +++ + G Y +L++ LC + K ++A
Sbjct: 398 SVTYNIVINGYCQHGDAKKA----FALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREAD 453
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ EK++ KG+K + + C G +++ A SL+ E P +Y+ +
Sbjct: 454 ELFEKVVGKGMKPDLVMMNTLMDGHCATG-NMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L EG+ E +++ EM+ +G P + Y ++ K G A ++ +EM+ F P
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF-IVRDEMLSLGFNP 571
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
T+ YN LLKGL + +A L++M K G V N ++ +++ + +
Sbjct: 572 TLLTYNALLKGLSKNQDGELAEELLREM-KSEGIVPNDSSFCSVIEAMSK 620
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 186/440 (42%), Gaps = 43/440 (9%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C SV+ IR Y R G + +++ +F+ + + + N +L +VK + + +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSV 177
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
FL+ ++ + + N+L++VLC + + ++ Q+M+ G P +Y+ ++
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R A LL M KG D+ Y L+ LC +I +L +RK
Sbjct: 238 YCKKGRFKAAIELLDHM----KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKR 292
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + + ++ + A L+NE L G P+ +++A+ +EG E
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 316 DKVLDEMRTKGFWPSLVMY-----------EAKLAALF---------------------- 342
K+ M KG PS V Y E LA F
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 343 --KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+G +DEA+ V+ EM K P + Y+ L+ G C G A + ++ + VG
Sbjct: 413 LCKNGFLDEAV-VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLS 470
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
NG Y L+ CR G EA R+ E M++ + T+NVL+ LC GK EA +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 461 LEEMISQAKLPDISVWSSLV 480
+ M S LP+ + L+
Sbjct: 531 MRCMTSDGILPNTVSFDCLI 550
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 191/471 (40%), Gaps = 40/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I S ++ +++++M F I + G EA+ +F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ S+ LL + K ++ + A ++R RI ++ D LC+
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI-DGLCK 415
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A+ + EM G PD +Y L+ G C R A ++ RI + G
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV----CRIYRVGLSP 471
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ +IY TL++ C G +++A++I E ++ +G + + C G+ E A+
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE-AEEF 530
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G +P+ S+ + N G ++ V DEM G P+ Y + L L K
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 344 DGMVDEALEVIEE----------------------------------EMVKGTFVPTVRV 369
G + EA + ++ EMV+ + +P
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y L+ GLC G + +A+++ K+ + + N Y VDG+ + G++ E+M
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P + T N +I G +GK + L EM +Q P+++ ++ L+
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 178/403 (44%), Gaps = 8/403 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + Y + G+ A+ L ++ ++N L+ ++ + +++ ++L LR
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRD 288
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N L++ + +A + EM G P+ +++ L+ G ++
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA MF+ + KG V Y LL LC + A ++ R G+ +
Sbjct: 349 FKEA----LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G ++ A L+NE G P + +YSA+ GR +++
Sbjct: 405 TYTGMIDGLCKNGF-LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ G P+ ++Y + + G + EA+ + E +++G +N+L+ LC AG
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAG 522
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A A +++ M+ G + N ++ L++G G L+A V +EM + P TY
Sbjct: 523 KVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++GLC G EA +L+ + + D ++++L+ ++C
Sbjct: 582 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 197/517 (38%), Gaps = 84/517 (16%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + R KE++ ++ +++T I R G L EA+ +++ +
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+FN L+ + K K+ A F+R + S + L++
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF EM G +P +Y L+KGLC L EA L S+ + D V
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL----HAVPAAVDTV 614
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y TLL A+C G + A+ + +++++ + + C G+ + A E
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI-AILFAKE 673
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
A RG + P+ Y+ ++ G+ G ++M G P +V A + + G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLK------------------------------ 375
+++ +++ EM P + YNILL
Sbjct: 734 KIEKTNDLL-PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 376 -----GLCDAGNSAVAVMYLKK----------------MSKQVGCVANGE---------- 404
G+C++ + + LK +SK C ANGE
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK---CCANGEINWAFDLVKV 849
Query: 405 --TYGILVDG---------LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ GI +D L R+ RF E+ VL EM + P Y LI GLC +G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTAD 489
A + EEMI+ P S++V ++ C AD
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 157/374 (41%), Gaps = 41/374 (10%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LK +VK+ LE HI +Q + + +L + R D A H+ +E+
Sbjct: 56 FLKWVVKQPGLETDHI--------------VQLVCITTHILVRARMYDPARHILKELSLM 101
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
+ S+ + L RL + +Y + R+ + +G
Sbjct: 102 ---SGKSSF--VFGALMTTYRLCNSNPSVYDILIRVYLR------------------EGM 138
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
IQD+++I + G + I GED+ S + E L R P +A+++
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKEMLKRKICPDVATFN 197
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG + ++ +M G+ P++V Y L K G A+E+++ K
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G V YN+L+ LC + A + L+ M K++ N TY L++G +G+ L
Sbjct: 258 GV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVL 315
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
AS++L EML P T+N LI G S G EA+ M ++ P + L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 481 ASVCCNTADLNVCR 494
+C N A+ ++ R
Sbjct: 376 DGLCKN-AEFDLAR 388
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 189/484 (39%), Gaps = 53/484 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ L ++ ++ E +E + M D F I Y +G+ +A S+F +
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ +LLK + K L A FL+S + N L+ +C+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAE-KFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA---------------THLLYS 211
A+ +F EM + PD +Y L+ GLC + A ++Y+
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 212 MF---------WR--------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
F W+ + G DIV ++ GKI+ +L ++ +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
P + I L + +D+ + L ++ G +P + ++ + + +
Sbjct: 749 N-GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G K+L +G + ++ +G ++ A ++++ G +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD--------- 858
Query: 375 KGLCDAGNSAV--------AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
K CDA S + + M L +MSKQ G Y L++GLCR G A V
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EEM+ P + ++R L GK EA + L M+ +P I+ +++L+ +CC
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCK 976
Query: 487 TADL 490
++
Sbjct: 977 NGNV 980
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 204/494 (41%), Gaps = 50/494 (10%)
Query: 25 LTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
L A +F E + +P + Y S++ L + + E ++ + + +
Sbjct: 560 LKAFSVFDEMTKVGHHPTFF----TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-- 140
+ T + ++G L +AVSLF + Q + + + ++ +L+ + ++ K A ILF +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA-ILFAKEA 674
Query: 141 -------------SCY------------GWEVKSRIQSL---------NLLMDVLCQCRR 166
+C+ G + ++ +L N ++D + +
Sbjct: 675 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM Q P+ +Y+IL+ G +R + +T L ++ I G D +
Sbjct: 735 IEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFL--LYRSIILNGILPDKL 790
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+L+ +C+ ++ ++IL+ + +G++ + + + C +GE I A L+
Sbjct: 791 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE-INWAFDLVKV 849
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + AM L R E VL EM +G P Y + L + G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A V++EEM+ P + +++ L G + A + L+ M K + V ++
Sbjct: 910 IKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK-MKLVPTIASF 967
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C++G +EA + M + +YNVLI GLC+ G A EEM
Sbjct: 968 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027
Query: 467 QAKLPDISVWSSLV 480
L + + + +L+
Sbjct: 1028 DGFLANATTYKALI 1041
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 18/331 (5%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+ + + + +++ + G PD+ + H L+ G+C L +L
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ R G D + L+ C G+I A +++ + G+ K D C
Sbjct: 814 AFICR----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK------DTCD 863
Query: 271 C-----NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
N + ++ +++E +G P Y + L G I V +EM
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P V A + AL K G DEA ++ M+K VPT+ + L+ C GN +
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGN-VI 981
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L+ + G + +Y +L+ GLC G A + EEM + TY LI
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Query: 446 RGLCSIGKQYE-AVMWLEEMISQAKLPDISV 475
RGL + + A + L++++++ + +S+
Sbjct: 1042 RGLLARETAFSGADIILKDLLARGFITSMSL 1072
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 78 CKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAH 135
C +V +A +R A+ G+ +EA L + + + V SF TL+ K +EA
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ + S G +K + S N+L+ LC LA +++EM G + +Y L++G
Sbjct: 986 LRVVMSNCG--LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 196 L 196
L
Sbjct: 1044 L 1044
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 191/456 (41%), Gaps = 35/456 (7%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++I+ G C + I Y R G + + L + + ++ TL+ +
Sbjct: 280 KLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL 339
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++ LE L L + +Q N ++D LC+CR + AL V ++M GC PD
Sbjct: 340 GRKGDLEKIASL-LSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPD 398
Query: 186 RESYHILMKGLCNDRRLNEATHLLY-SMFWRIS--------------------------- 217
++ L+ GLC + R+ EA LL + W ++
Sbjct: 399 AITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLV 458
Query: 218 ---QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
++G D+V + L+ L G++ +A+ + EK+ + L P + + + +
Sbjct: 459 EMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQL-LPDANIYNVLISGLCKK 517
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ + A++LI E L + P Y+ + + E K+ + M KG P +V Y
Sbjct: 518 KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGY 577
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
A + + GM++EA+E + M K +P Y L+ G GN + A+ L M
Sbjct: 578 NAMIKGYCQFGMMNEAVECM-STMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K+ C N Y L++G C+ G A + M + +P V TY +LI L K
Sbjct: 637 KRR-CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKV 695
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
A M+ E M+ P+ SLV +C + A +
Sbjct: 696 VRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 190/462 (41%), Gaps = 56/462 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y S+I L + ++ V+ QM C+ F+T I + G++ EA L
Sbjct: 363 NVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLL 422
Query: 104 KNLSQFNCVNWTQSFNTLLK------EMVKESKL-----EAAH----ILFLRSCYGWEVK 148
+ +++ S+ +L+ E++ S L E H + F +G V
Sbjct: 423 RETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVA 482
Query: 149 SRIQS-------------------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ N+L+ LC+ + A ++ +EM Q +PD+ Y
Sbjct: 483 GQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY 542
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
L+ G + L+EA + F + QKG D+V Y ++ C G + +A++ +
Sbjct: 543 TTLIDGFIRNESLDEARKI----FEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECM- 597
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+RK + P + + +I GA SL+ + + R P++ +YS++
Sbjct: 598 STMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKL 657
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK-DGMVDEALEVIEEEMVKGTFVPTVR 368
G + + M ++G +P+++ Y + +LFK D +V A+ E M+ P
Sbjct: 658 GDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYF--EYMLLNQCSPNDY 715
Query: 369 VYNILLKGLCDAGNSAV--------------AVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ L+ GLC++ S + A++ + + C Y ++ LC
Sbjct: 716 TLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLC 775
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
EA + +M + Y P T+ L+ G CS+GK E
Sbjct: 776 IHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSRE 817
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 42/262 (16%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+E LI G +P+ Y+ + ID Y G + G +L EM KG P++V Y
Sbjct: 275 VEKGLKLIEARWGAGCVPNAVFYNVL-IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
++ L + G + E + + EM + P V++YN ++ LC +++ A++ LK+M
Sbjct: 334 TLMSWLGRKGDL-EKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEE--------------------------- 428
GC + T+ L+ GLC++GR EA R+L E
Sbjct: 393 G-GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVI 451
Query: 429 --------MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M+ R + P V T+ LI GL G+ EA++ E+M ++ LPD ++++ L+
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511
Query: 481 ASVCCN---TADLNVCRKTLEQ 499
+ +C A N+ + LEQ
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQ 533
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 18/222 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++IG ++ I+ ++ M C+ +++ I Y + G + A LF ++
Sbjct: 611 TYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSM 670
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCY--GWEVKSRIQSL-NLLMD 159
++ L+ + K+ K+ A + F L C + + S + L N +
Sbjct: 671 ESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMAS 730
Query: 160 VLCQCRRSDLALH-------VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
++ S + LH +F+ + C P +Y+ ++ LC L EA L M
Sbjct: 731 IISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKM 790
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ KG D + +LL+ C GK ++ IL ++
Sbjct: 791 ----ANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQR 828
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 202/452 (44%), Gaps = 9/452 (1%)
Query: 7 RLLTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
+L P ++IK+ +P LK + + + + H Y +I L + ++
Sbjct: 55 KLNDPLVAFEVIKRLNNNPQVGLKFMEFCRLNF-SLIHCFSTYELLIRSLCQMGLHDLVE 113
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
VI M+ D V + ++A+AG+ + A L + + +N LL E+
Sbjct: 114 MVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNEL 173
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VK K+ A LF + + + N+L+ LC+ + +F M GC PD
Sbjct: 174 VKGGKVHEAIFLF-KENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPD 232
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ GLC L+ A LL + S+ D++ Y +++ GK++ A
Sbjct: 233 VVTYNTLISGLCKANELDRACDLLKEV---QSRNDCSPDVMTYTSIISGFRKLGKLEAAS 289
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ E+++R G++ P + + ++ A+++ + IP + +++++
Sbjct: 290 VLFEEMIRSGIE-PTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDG 348
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G I G KV D M+ + P++ Y + AL KD + EA +++ + F P
Sbjct: 349 YCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVF-P 407
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+YN ++ G C AGN A + + +M ++ C + T+ IL+ G C GR +EA +
Sbjct: 408 KPFIYNPVIDGFCKAGNVDEANVIVTEMEEK-RCRPDKVTFTILIIGHCMKGRMVEALDI 466
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
++ML P T + L+ L GK EA
Sbjct: 467 FKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +LC G + D ++++ +R SR + + AK LI E
Sbjct: 96 YELLIRSLCQMG-LHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE- 153
Query: 288 LIRGGIPSLAS--YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
++G ++S Y+ + +L G++ E + E P+ + + L + G
Sbjct: 154 -VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVG 212
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
V++ E+ G +P V YN L+ GLC A A LK++ + C + T
Sbjct: 213 EVEKGFELFNAMQSFGC-LPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMT 271
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G + G+ AS + EEM+ P V T+NVLI G IG A E+M
Sbjct: 272 YTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMA 331
Query: 466 SQAKLPDISVWSSLVASVCCNTADL 490
S + +PD+ ++SL+ C T D+
Sbjct: 332 SYSCIPDVVTFTSLIDGY-CRTGDI 355
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 181/404 (44%), Gaps = 50/404 (12%)
Query: 118 FNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
F+ +L ++ K + LF + C + + S N++++ LC+C R +AL V
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHMEVC---GIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+M G PD + L+ G C R+ +A L+ M + G D+VIY T++
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM----EEMGFRPDVVIYNTIIDGS 125
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G + DA+++ +++ R G++A + + C G + A+ L+ + ++R +P+
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR-LMRDMVMRDIVPN 184
Query: 296 LASYSAM------------AIDLYNE-----------------------GRIVEGDKVLD 320
+ +++A+ A+ LY E GR+ E ++LD
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M TKG P +V Y + K VDE ++ E +G T+ YN +++G A
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI-TYNTIIQGYFQA 303
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A +M + N TY IL+ GLC + R +A + E M + T
Sbjct: 304 GRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 359
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN++I G+C IG +A + + PD+ ++++++ C
Sbjct: 360 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 46/375 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +S+I + NR+ + +++ +M+ ++ T I + G +N+AV
Sbjct: 76 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 135
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
LF + + ++N+L+ + + A L +R ++ + + ++DV
Sbjct: 136 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL-MRDMVMRDIVPNVITFTAVIDV 194
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + A+ +++EM + PD +Y+ L+ GLC R++EA +L M KG
Sbjct: 195 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV----TKG 250
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y TL+ C + R+D EG
Sbjct: 251 CLPDVVTYNTLINGFC-------------------------KSKRVD----------EGT 275
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L E RG + +Y+ + + GR ++ M ++ P++ Y L
Sbjct: 276 K-LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 331
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + V++AL V+ E M K + YNI++ G+C GN A + +S + G
Sbjct: 332 LCMNWRVEKAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLK 389
Query: 401 ANGETYGILVDGLCR 415
+ +Y ++ G CR
Sbjct: 390 PDVVSYTTMISGFCR 404
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T + + K+ A+K+++E + + + Y S+I L R+ E K
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEAK 240
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C + T I + ++ +++E LF+ ++Q V T ++NT+++
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + +AA +F R + + I++ ++L+ LC R + AL +F+ M D
Sbjct: 301 FQAGRPDAAQEIFSR----MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I++ G+C + +A + +F +S KG D+V Y T++ C + + +
Sbjct: 357 ITTYNIVIHGMCKIGNVEDA----WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 412
Query: 246 QILEKILRKGL 256
+ K+ GL
Sbjct: 413 LLYRKMQEDGL 423
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
PS+V + L+ + K D + + V G + YNI++ LC +A+
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG-IGHDLYSYNIVINCLCRCSRFVIALS 66
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ KM K G + T L++G C+ R +A ++ +M + P V YN +I G
Sbjct: 67 VVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C IG +AV + M D ++SLVA +CC+
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 200/485 (41%), Gaps = 62/485 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T L K K+ AL ++KE + N + ++I L + R+ E +E++D+M
Sbjct: 494 TLLDGFFKSGKTE-KALNLWKETLAR--GLAKNTTTFNTVINGLCKIERMPEAEELVDKM 550
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK-EMVKESK 130
K C + T Y + G ++ A + L + FN+L+ + +
Sbjct: 551 KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQH 610
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
+ ILF EM +G P+ +Y
Sbjct: 611 GKVNDILF-------------------------------------EMSNRGLSPNTVAYG 633
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ G C + L H Y+++ + +KG ++ I +L+ +GK +A +L+
Sbjct: 634 ALIAGWCKEGDL----HTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQN 689
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS--YSAMAIDLYN 308
++ D+ P +E K + GG A ++ + L
Sbjct: 690 LVGT------------DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCK 737
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
GRI + +L +++ KGF Y + + G VD A + + + M+ P +
Sbjct: 738 LGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFD-LRDTMLSVGLTPNIV 796
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+ GLC +G + AV KK+ + G N TY L+D C+DG EA ++ +
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTK-GISPNAITYNTLIDKHCKDGYITEAFKLKQR 855
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD-ISVWSSLVASVCCNT 487
M+ P V TY++LI GLC+ G EA+ L++MI P+ ++ W+ + V C +
Sbjct: 856 MIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCES 915
Query: 488 ADLNV 492
D+ +
Sbjct: 916 VDVPI 920
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 189/419 (45%), Gaps = 10/419 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F +R A AGQL+ A+ +F + C +S N++L + + L A +F +
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQ 235
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + ++ ++ C+ + AL +EM G + +YH +M G C +
Sbjct: 236 RAGALPDKF-TVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKS 261
N+A +L S+ +G +IV Y L+ C++ +++A ++++I + K L ++
Sbjct: 295 NDARRMLDSL----PGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G +E A L+NE + +L Y+ M GR+VE +L E
Sbjct: 351 VFGAVINGYCQMGR-MEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P Y + + K G++++A E M++ F T YN LLKG C G
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT-MLRNGFAATTLTYNALLKGFCSLG 468
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A+ M K+ G N + L+DG + G+ +A + +E L R T+
Sbjct: 469 SIDDALRLWFLMLKK-GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTF 527
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
N +I GLC I + EA +++M PDI + +L + C D++ + L +L
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGY-CKIGDMDRASRILNEL 585
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 128/332 (38%), Gaps = 41/332 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S +LL+ L + D AL VF EM GC S + ++ L L ++
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV----AV 230
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F ++ + G+ D + A C + A++ +E++ + G++
Sbjct: 231 FEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEV-------------- 276
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+L +Y A+ G+ + ++LD + +GF P++V
Sbjct: 277 ----------------------NLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIV 314
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + + ++EA V++E V V+ ++ G C G A L +
Sbjct: 315 TYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE 374
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M V N Y I+++G C+ GR +EA +L EM P +YN L+ G C G
Sbjct: 375 MVDSRLQV-NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKG 433
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A M+ +++L+ C
Sbjct: 434 LMNKAFETYNTMLRNGFAATTLTYNALLKGFC 465
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 45/375 (12%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C + F+ L++ +KE ++ A F L G+ K + + N+++ + + +R++L
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGF--KPSVYTCNMILASMVKDKRTEL 216
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
+F+EM +G P+ +++IL+ GLC + L +A +LL M + G IV Y
Sbjct: 217 VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM----EENGFVPTIVTYN 272
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TLL C +G+ + A+++++ ++ KG++A D+C
Sbjct: 273 TLLNWYCKKGRYKAAIELIDYMICKGIEA--------DVC-------------------- 304
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+Y+ +L R + +L +MR + P+ V Y + K+G +
Sbjct: 305 --------TYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +V EM K P YN L+ G C G+ A+ L M + G N TYG L
Sbjct: 357 AAQVF-NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM-EAAGLRLNEVTYGTL 414
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++GLC+ +F A R+LE M + Y VLI GLC G EAV + M
Sbjct: 415 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 474
Query: 470 LPDISVWSSLVASVC 484
PD+ +SSL+ C
Sbjct: 475 NPDVITYSSLINGFC 489
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 177/405 (43%), Gaps = 10/405 (2%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFL 139
F I G L +A +L K + + V ++NTLL K+ + +AA ++
Sbjct: 234 GTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY 293
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
C G +++ + + N+ +D LC RS A + ++M + P+ +Y+ L+ G +
Sbjct: 294 MICKG--IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKE 351
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
++ A + F +S+ + V Y L+ C G ++A+++L+ + GL+
Sbjct: 352 GKIGVAAQV----FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C E E AK L+ + + +Y+ + L G + E +++
Sbjct: 408 EVTYGTLLNGLCKH-EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLV 466
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
M G P ++ Y + + + G + A E+I M + V +Y+ L+ C
Sbjct: 467 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR-MYRSGLVLNKIIYSTLIYNFCQ 525
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
GN A+ M+ G A+ T +LV LCRDG+ EA + L M P
Sbjct: 526 HGNVTEAMKVYAVMNCN-GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSI 584
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ +I G SIG A + ++MI + P + SL+ +C
Sbjct: 585 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 208/498 (41%), Gaps = 50/498 (10%)
Query: 24 PLTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
PL A F + + ++P++ Y S++ L + + E K+ ++++
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFF----TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 654
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ T + ++G L+EAV+LF + Q N + + ++++LL + ++ K A LF +
Sbjct: 655 MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 714
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ L+D L + A + F+EM +G PD +++ ++ +
Sbjct: 715 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 774
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +M W G ++ Y LL + + + + ++R+G+ K
Sbjct: 775 MMKANDFFSTMRWW----GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 830
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLD 320
H + L G G K L+ + ++ G + +++ + I+ Y+E G++ + +++
Sbjct: 831 TFHSLILGLSKSGIPDLGVK-LLGKMIMEGTLADQFTFNIL-INKYSESGKMRKAFDLVN 888
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M T G +P Y L K E+ V+ EM++ +P Y L+ G+C
Sbjct: 889 FMNTLGVFPDRDTYNHIFNGLNKKSAFRES-TVVLHEMLENGVIPKHAQYITLINGMCRV 947
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G+ A LK + +G ++ +V GL G+ +A VL+ ML P + T
Sbjct: 948 GDIQGA-FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 1006
Query: 441 -----------------------------------YNVLIRGLCSIGKQYEAVMWLEEMI 465
YNVLI G+C+ G A EEM
Sbjct: 1007 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1066
Query: 466 SQAKLPDISVWSSLVASV 483
+ P+I+ ++ LV ++
Sbjct: 1067 HRDLCPNITTYAVLVDAI 1084
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 177/439 (40%), Gaps = 7/439 (1%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ L + + K ++++M+ + + I + G L+EAV
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L N+ + ++++L+ + +++A + R V ++I L+ +
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN-F 523
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ A+ V+ M+ G D + ++L+ LC D +L EA L M S+ G
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM----SRIGL 579
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + Y ++ G +A + +++ G + C G +E K
Sbjct: 580 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 639
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L I G + S+ Y+ + + G + E + D+M P Y + L L
Sbjct: 640 FLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ G A+ + M +GT P +Y L+ GL AG+ A + ++M K+ G
Sbjct: 699 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK-GTCP 757
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ + ++D R G+ ++A+ M P + TYN+L+ G +
Sbjct: 758 DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 817
Query: 462 EEMISQAKLPDISVWSSLV 480
M+ + PD + SL+
Sbjct: 818 STMMREGIFPDKLTFHSLI 836
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 184/424 (43%), Gaps = 26/424 (6%)
Query: 14 LSQIIKKQKSPLTALKIFKEAKEK---YPNYRHNGPVYASMIGILSESNRITEMKEVIDQ 70
L+ + +K K+ +TA+ +F A + +PN+ +Y ++ LS++ ++
Sbjct: 695 LTGLCRKGKA-VTAVCLFGTAMGRGTLFPNH----VMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 71 MKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
M C D+V F I + +R GQ+ +A F + + ++N LL K+
Sbjct: 750 MMKKG-TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808
Query: 130 KLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
L L S Y ++ I + + L+ L + DL + + +M +G D
Sbjct: 809 AL-----LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 863
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +++IL+ ++ +A L+ M + G D Y + L + +++
Sbjct: 864 QFTFNILINKYSESGKMRKAFDLVNFM----NTLGVFPDRDTYNHIFNGLNKKSAFREST 919
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L ++L G+ ++ + C G DI+GA L +E G + SAM
Sbjct: 920 VVLHEMLENGVIPKHAQYITLINGMCRVG-DIQGAFKLKDEMEALGFGSHEVAESAMVRG 978
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G+ + VLD M P++ + + +D + EAL++ + G +
Sbjct: 979 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1038
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V YN+L+ G+C G+SA A ++M + C N TY +LVD + ++ ++
Sbjct: 1039 VV-AYNVLIMGMCANGDSAAAFELYEEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKL 1096
Query: 426 LEEM 429
L ++
Sbjct: 1097 LTDL 1100
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 36/294 (12%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
++ L+ +G I A++ E + G K P + L + E SL E
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFK-PSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G P++ +++ + L EG + + +L +M GF P++V Y L K G
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV--------- 397
A+E+I+ + KG V YN+ + LC SA A + LKKM K++
Sbjct: 284 YKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342
Query: 398 ----GCVANGE---------------------TYGILVDGLCRDGRFLEASRVLEEMLIR 432
G V G+ TY L+ G C G F EA R+L+ M
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY L+ GLC K A LE M + ++ L+ +C N
Sbjct: 403 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKN 456
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 206/468 (44%), Gaps = 82/468 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K + P AL +F + ++ ++H+ P Y++++ L+ S ++ ++D ++ +
Sbjct: 97 LKSVQDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIR 154
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++++F I+ Y ++ +AV LF+ + F
Sbjct: 155 CRETLFIALIQHYGKSQMPEKAVELFQRMPSF---------------------------- 186
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+C+ V S N L++VL + R A+ +F G + S++I++KG
Sbjct: 187 ---NCHRTLV-----SFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWL 238
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
++A + +F + K +V + +L+ LC +G + AM +LE +++K
Sbjct: 239 GKGEWDKA----WQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQK--- 291
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
RHR P+ +Y+ + L + G+ E K
Sbjct: 292 -----RHR----------------------------PNAVTYALLMEGLCSLGKYKEAKK 318
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P L+ + ++ L + G +D++ + + EM + F P V YNIL+ L
Sbjct: 319 MMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDS-KTLLLEMKRRRFKPDVVTYNILINHL 377
Query: 378 CDAGNSAVAVMYLKKMSKQVG-CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G + A L +M QVG C N TY ++VDG C+ F +VL ML+ + P
Sbjct: 378 CKEGRALEAYKVLVEM--QVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCP 435
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+E++ L+ GL GK A LEEM + + W +LV C
Sbjct: 436 RLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 483
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 224/516 (43%), Gaps = 54/516 (10%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
A K+F+E + P R N ++ +MI L + ++ M +
Sbjct: 209 AAWKVFEEMAARGP--RPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNI 266
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSC 142
++ + GQ +A +LF + C ++N L+ E+ +E ++ A +LF L++
Sbjct: 267 LMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQA- 325
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG------- 195
G EV + + N+L+D + + + A EM G PD +++IL G
Sbjct: 326 -GVEVNT--ITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKA 382
Query: 196 -----------------------------LCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
LC D RL++A LL S +KG +
Sbjct: 383 ALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAI----EKGVQVSVS 438
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ A +G ++A ++ + + + GL S + + + CN G ++ A+ L E
Sbjct: 439 GFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGR-LDQAR-LFLE 496
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
++R G +AS++ + G ++ K D+M+ G P V + A + L +
Sbjct: 497 YMVRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDF 556
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+DEA E M++ VP YN L+ C AGN + A+ +KM +Q G V + T
Sbjct: 557 LDEAYNGFIE-MIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKM-RQSGLVPDIFTR 614
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
IL+DG CR+G A+ + M P V TYN ++ C A++++ +M++
Sbjct: 615 NILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLA 674
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
PDI ++ + S+C N LN L++L++
Sbjct: 675 DGCEPDIFTYNIWMHSLCSNHL-LNRAMMLLDELAA 709
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 163/389 (41%), Gaps = 55/389 (14%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S F I Y++ G EA L+K +++ + + N L+ + +L+ A LFL
Sbjct: 438 SGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQAR-LFLE 496
Query: 141 SCY--GWEVKSRIQSLNLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGL 196
G+ V I S + +D R D+ AL + +M G PD ++ + GL
Sbjct: 497 YMVRMGYCV---IASFTIYLD--SSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGL 551
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C L+EA Y+ F + ++G + Y +L+ A C G + +A+++ +K+ + GL
Sbjct: 552 CRLDFLDEA----YNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGL 607
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+P + + + + EG + +
Sbjct: 608 ------------------------------------VPDIFTRNILIDGFCREGGLNTAN 631
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ M + G P +V Y L A + ++ A+ + + + G P + YNI +
Sbjct: 632 NLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGC-EPDIFTYNIWMHS 690
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR-SYW 435
LC A+M L +++ C N TY L+DG+C D L+ + +L LI+ ++
Sbjct: 691 LCSNHLLNRAMMLLDELAA-TDCAPNSVTYNTLMDGICSD--VLDRAMILTGRLIKLAFQ 747
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
P T N+L C G A++W E++
Sbjct: 748 PNTVTINILFSHFCKNGFGKRALVWAEKL 776
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G E VL +R G PSL A L LF+ G V A +V EE +G P + +
Sbjct: 170 GMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGP-RPNLAI 228
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N ++ GLC G V+ L M + V + +Y IL+ G C G+ +A + +EM
Sbjct: 229 FNAMIFGLCHRGLVRVSGGLLGVMGR-FHVVPDACSYNILMKGHCLYGQAEDAFNLFDEM 287
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ P + TYN+L+ LC G+ EA M +EM+
Sbjct: 288 RVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 214/491 (43%), Gaps = 63/491 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS-LFKNL 106
+A+ IL R+ E+ VI+Q+ C+ K +++EA+ L + +
Sbjct: 110 FAAFGLILKTGWRVNEV--VINQLLNGLCDAK---------------RVDEAMDILLRRM 152
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQC 164
+F C+ S NTLLK + E ++E A L + G + + N ++D LC+
Sbjct: 153 PEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKA 212
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ D A V Q M +G D +Y ++ GLC + ++ A +L M KG D
Sbjct: 213 QAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI----DKGVKPD 268
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+V Y T++ LC + A +L+ ++ KG+K + I C + ++ A ++
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK-AQAVDRADGVL 327
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ + P + +Y+ + + G E + L+EM +G P +V Y L L K+
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKG---------------------------- 376
G EA ++ M++ P V +Y ILL G
Sbjct: 388 GKCTEARKIFYC-MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446
Query: 377 ----LCDAGNSAV---AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
LC A+ A+ +MS Q G + TYGIL+D LC+ GR +A +M
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMS-QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ P +N L+ GLC++ + +A EM Q P++ +++++ ++ CN
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNL-CNEGQ 564
Query: 490 LNVCRKTLEQL 500
+ V ++ ++ +
Sbjct: 565 VMVAQRLIDSM 575
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 208/480 (43%), Gaps = 9/480 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKE-AKEKYPNYRHNGPVYASMIGILSESNRITEM 64
P +++ L + + +K AL++ A++ N N Y ++I L ++ +
Sbjct: 159 PNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRA 218
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ V+ M + ++T I +A ++ A + +++ ++NT++
Sbjct: 219 EGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 278
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K ++ A + L+ VK + + N ++D LC+ + D A V Q M + P
Sbjct: 279 LCKAQAVDRAEGV-LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP 337
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D ++Y+ L+ G + E L M+ R G D+V Y LL LC GK +A
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYAR----GLDPDVVTYSLLLDYLCKNGKCTEA 393
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+I ++RKG+K P + I L I L++ + G P+ ++ +
Sbjct: 394 RKIFYCMIRKGIK-PNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
+ I E + M G P +V Y + AL K G VD+A+ + +M+
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV-LKFNQMINDGVT 511
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P V+N L+ GLC A +M Q G N + ++ LC +G+ + A R
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ-GVRPNVVFFNTIMCNLCNEGQVMVAQR 570
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+++ M P V +YN LI G C G+ EA L+ M+S PD+ + +L+ C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 51/406 (12%)
Query: 91 ARAGQL--NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK---ESKLEAAHILF---LRSC 142
AR+G L ++A+ LF L ++FN LL + + S E A LF R+C
Sbjct: 23 ARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARAC 82
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+V+ + + ++L C+ R + F + G + + L+ GLC+ +R+
Sbjct: 83 SN-KVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRV 141
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA +L R+ + G ++V TLL LC++ ++++A+++L + G
Sbjct: 142 DEAMDIL---LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDG------- 191
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLD 320
GG P++ +Y+ + L + + VL
Sbjct: 192 ----------------------------GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQ 223
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M KG +V Y + L K VD A V++ + KG P V YN ++ GLC A
Sbjct: 224 HMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV-KPDVVTYNTIIDGLCKA 282
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A L+ M + G + TY ++DGLC+ A VL+ M+ + P ++T
Sbjct: 283 QAVDRAEGVLQHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQT 341
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
YN LI G S G+ E V LEEM ++ PD+ +S L+ +C N
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 195/464 (42%), Gaps = 35/464 (7%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L ++ + + V+ M + + T I +A ++ A + +++
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ Q++N L+ + + + + L Y + + + +LL+D LC+ +
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEV-VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM--------------- 212
A +F M +G P+ Y IL+ G + + T LL M
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450
Query: 213 ----------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
F R+SQ G D+V Y L+ ALC G++ DA+ +++ G+
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + C + E A+ L E +G P++ ++ + +L NEG+++
Sbjct: 511 TPNSVVFNSLVYGLCT-VDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+++D M G P+++ Y + G DEA ++++ MV P + Y+ LL+G
Sbjct: 570 RLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV-MVSVGLKPDLISYDTLLRG 628
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G A ++M ++ G TY ++ GL RF EA + M+
Sbjct: 629 YCKTGRIDNAYCLFREMLRK-GVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ TYN+++ GLC EA + + S+ P+I ++ ++
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMI 731
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 191/472 (40%), Gaps = 43/472 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+++I L ++ + + V+ M + + T I +A ++ A + +++
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI 296
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++NT++ + K ++ A + L+ +VK IQ+ N L+
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGV-LQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ +EM +G PD +Y +L+ LC + + EA + Y M +KG ++ I
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMI----RKGIKPNVTI 411
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y LL +G I D +L+ ++ G+ +P + I LC I+ A + +
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGI-SPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEG-------------------------------- 315
G P + +Y + L GR+ +
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530
Query: 316 ---DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+++ EM +G P++V + + L +G V A +I+ M + P V YN
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS-MERVGVRPNVISYNT 589
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ G C AG + A L M VG + +Y L+ G C+ GR A + EML +
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMV-SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRK 648
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY+ +++GL + EA MI + DI ++ ++ +C
Sbjct: 649 GVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 8/308 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N V+ S++ L +R + +E+ +M F T + GQ+ A L
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++ + S+NTL+ + EAA +L + G +K + S + L+ C
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG--LKPDLISYDTLLRGYC 630
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R D A +F+EM +G P +Y +++GL + RR +EA L +M + G
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI----KSGQQ 686
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI Y +L LC + +A +I + + K L+ P I + G + A
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR-PNIITFTIMIDVLFKGGRKKDAMD 745
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L G +P++ +Y M ++ EG + E D + M G P VM A + +L
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805
Query: 343 KDGMVDEA 350
G + A
Sbjct: 806 GRGEIMRA 813
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 38/244 (15%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y ++IG + R E +++D M + + T +R Y + G+++ A
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL---RSCYGWEV----------- 147
LF+ + + +++T+L+ + + A L+L +S W++
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Query: 148 --------------------KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ I + +++DVL + R A+ +F + G P+
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y I+MK + + L+E +L +M + G D V+ ++ +L +G+I A
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAM----EKSGCTPDSVMLNAIIRSLLGRGEIMRAGAY 816
Query: 248 LEKI 251
L KI
Sbjct: 817 LSKI 820
>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 580
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 160/338 (47%), Gaps = 15/338 (4%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S LL D LC+ R A+ V + M G PD +Y L+ LC + A L+
Sbjct: 111 HSTQLLYD-LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEK 169
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G + V Y L+ LC G + ++Q +E+++++GL AP + + L
Sbjct: 170 M----EDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGL-APNAFTYSFLLEAA 224
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ A L++E + +GG P+L SY+ + EGR + K+ E+ KGF ++
Sbjct: 225 YKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANV 284
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y L L DG DEA ++ EM G P+V YNIL+ L G + A+ LK
Sbjct: 285 VSYNILLRCLCCDGRWDEANSLL-AEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLK 343
Query: 392 KMSK----QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+MSK Q A +Y ++ LC++G+ + L+EM+ R P TY+ I
Sbjct: 344 EMSKGHHHQFRVTAT--SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSA-IGA 400
Query: 448 LCSI-GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC GK EA ++ + ++ K + S++ S+C
Sbjct: 401 LCEHNGKVQEAFYIIQSLSNKQKCCTHDFYKSVITSMC 438
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 201/460 (43%), Gaps = 42/460 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ Y ++ L + + +++++M+ + +R G LN+++
Sbjct: 143 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFV 202
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ L Q +++ LL+ KE + A + L + + S N+L+ C+
Sbjct: 203 ERLMQRGLAPNAFTYSFLLEAAYKERGTDQA-VKLLDEIIAKGGQPNLVSYNVLLTGFCK 261
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R+D A+ +F+E+ +G + SY+IL++ LC D R +EA LL M
Sbjct: 262 EGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEM----DGGDRAP 317
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y L+ +L G+ + AMQ+L+++ K H+ +
Sbjct: 318 SVVTYNILINSLAFHGRTEQAMQVLKEM-------SKGHHHQFRV--------------- 355
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ SY+ + L EG++ K LDEM + P+ Y A A
Sbjct: 356 -----------TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEH 404
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G V EA +I+ K T Y ++ +C GN+ A L +M++ G +
Sbjct: 405 NGKVQEAFYIIQSLSNKQKCC-THDFYKSVITSMCRKGNTFAAFQLLYEMTR-CGFDPDA 462
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+ GLC +G F+ A VL M Y P V+ +N +I GLC I + A+ E
Sbjct: 463 HTYSALIRGLCLEGMFIGAMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLALEVFE 522
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
M+ + ++P+ + ++ +V + + +L + ++ LE+L S
Sbjct: 523 MMVGKKRMPNETTYAIIVEGI-AHEDELELAKEVLEELRS 561
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIP 294
D+ + D LE ++ G K + ++ DLC N ++ A +I + G IP
Sbjct: 86 DEPSLSDTFSHLECLVTDGHKPNVAHSTQLLYDLCKANR---LKKAIRVIELMVSSGIIP 142
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++Y+ + L G + +++++M GF + V Y A + L G ++++L+ +
Sbjct: 143 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFV 202
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E M +G P Y+ LL+ + AV L ++ + G N +Y +L+ G C
Sbjct: 203 ERLMQRG-LAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAK-GGQPNLVSYNVLLTGFC 260
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++GR +A ++ E+ ++ + V +YN+L+R LC G+ EA L EM + P +
Sbjct: 261 KEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSVV 320
Query: 475 VWSSLVASV 483
++ L+ S+
Sbjct: 321 TYNILINSL 329
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++A + + DL R+ + +V++ M + G P Y + L K G V A
Sbjct: 104 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 163
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++++E+ M F YN L++GLC G+ ++ +++++ Q G N TY L+
Sbjct: 164 MQLVEK-MEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERL-MQRGLAPNAFTYSFLL 221
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ ++ +A ++L+E++ + P + +YNVL+ G C G+ +A+ E+ +
Sbjct: 222 EAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFK 281
Query: 471 PDISVWSSLVASVCCN 486
++ ++ L+ +CC+
Sbjct: 282 ANVVSYNILLRCLCCD 297
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 207/495 (41%), Gaps = 41/495 (8%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL ++++ A ++ +G V +++G L + ++ +++G CE + +
Sbjct: 97 PLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELV 156
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ ++ R G A +F + + T +N L+ V+ ++ A++ F +
Sbjct: 157 CALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRF-QQMP 215
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + N L+ +C+ D A+ + ++M+ +G P+ +Y +L+ G CN R+
Sbjct: 216 ADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVE 275
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA + M ++ +KG YRTL+ + + A ++L L S
Sbjct: 276 EA----FRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSAC 331
Query: 264 HRIDLCPCNDG---EDIEGAK-------------------------------SLINEALI 289
H + C E +E K L++ +
Sbjct: 332 HTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIK 391
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
GG P Y + L N + + L M KG S++ Y + K G VD+
Sbjct: 392 NGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDK 451
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E+++E KG F+P + +N L+ G GN A + LK + + G + + T+ L
Sbjct: 452 AEEIVKEMQDKG-FLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH-GFMPDIITFTSL 509
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+DGLC + +A EEM P +TYNVL+ LCS G +A+ L +M
Sbjct: 510 IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGV 569
Query: 470 LPDISVWSSLVASVC 484
PD +++L+ S C
Sbjct: 570 TPDAYSFNALILSFC 584
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 65/330 (19%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S NC N++++ N L MV + L S + S N+++D +
Sbjct: 407 SLLNCKNFSKA-NHYLGHMVLKGLL-----------------SSVMSYNMVIDCFVKAGA 448
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + +EM +G P+ +++ L+ G ++ A +L + + G DI+
Sbjct: 449 VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLM----EHGFMPDII 504
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ LC+ ++ DA E++ G++
Sbjct: 505 TFTSLIDGLCNTHQLDDAFVCFEEMAEWGVR----------------------------- 535
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P+ +Y+ + L + G + + +L++M+ G P + A + + +
Sbjct: 536 -------PNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRK 588
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGC-VANG 403
VD+A E I +MV+ VP YN L+K LCD N A +++ ++ S GC +N
Sbjct: 589 VDKA-EDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERS---GCSTSNN 644
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
++Y +V L + G+F EA ++++ L R+
Sbjct: 645 QSYWPIVAALAKMGQFSEAGELMDKYLSRN 674
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 39/246 (15%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I ++ + + +E++ +M+ F T I Y++ G ++ A + K L
Sbjct: 436 YNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLM 495
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC--- 164
+ + +F +L+ + +L+ A + F W V+ Q+ N+LM LC
Sbjct: 496 EHGFMPDIITFTSLIDGLCNTHQLDDAFVCF-EEMAEWGVRPNAQTYNVLMHTLCSAGHV 554
Query: 165 --------------------------------RRSDLALHVFQEMDFQGCYPDRESYHIL 192
R+ D A +F +M G PD +Y+ L
Sbjct: 555 NKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSL 614
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+K LC++RR+N+A +L F R S + Y ++ AL G+ +A ++++K L
Sbjct: 615 IKALCDERRVNKAKEIL---FARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYL 671
Query: 253 RKGLKA 258
+ ++
Sbjct: 672 SRNAQS 677
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 6/332 (1%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+D L R D AL VF C ++H L+ L + R++ A +M R
Sbjct: 97 LIDRLGAASRPDAALLVFFRAVPAFCSHSNATFHALIHCLVCNGRVDAAR----NMLPRA 152
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++ G + V Y +L LC + A +L+++L +G++ + + C +G D
Sbjct: 153 AKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGAACQEG-D 211
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A+ L E + RG P+ +YS + L + GR + K++ +M +G V Y
Sbjct: 212 VGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGV 271
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
++A + G VD ++ + M K P YN+L+K LCD+G A L +M +
Sbjct: 272 LMSAYARQGDVDSVRGLLSD-MRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEMQLK 330
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G V + TY +L DG CR G F RV ML + P T+ L +GL G E
Sbjct: 331 DGTVPSAATYRVLADGCCRAGDFGLGLRVFNAMLASGHRPLGHTFKHLAKGLGEDGMADE 390
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
A LE+M D W SL A VC +A
Sbjct: 391 ACFVLEKMAESGVWMDAEGWRSLAACVCSGSA 422
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 5/318 (1%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+A +I L ++R V + C ++ F I G+++ A ++
Sbjct: 93 VFAGLIDRLGAASRPDAALLVFFRAVPAFCSHSNATFHALIHCLVCNGRVDAARNMLPRA 152
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ S+N +LK + A ++ L G V+ + + N L+ CQ
Sbjct: 153 AKLGVRPNAVSYNIILKGLCGRDGSAGARVV-LDEMLGRGVRPTVVTFNTLVGAACQEGD 211
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A + +EM +G P+ +Y +LM+GLC+ R ++A L++ M + +G + V
Sbjct: 212 VGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEY----QGCQTEAV 267
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ A QG + +L + ++ L + + + C C+ G+ E K+L+
Sbjct: 268 NYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEM 327
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G +PS A+Y +A G G +V + M G P ++ L +DGM
Sbjct: 328 QLKDGTVPSAATYRVLADGCCRAGDFGLGLRVFNAMLASGHRPLGHTFKHLAKGLGEDGM 387
Query: 347 VDEALEVIEEEMVKGTFV 364
DEA V+E+ G ++
Sbjct: 388 ADEACFVLEKMAESGVWM 405
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 4/193 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+ ++ L ++ R + K+++ M+ C+ + + + YAR G ++ L
Sbjct: 230 NAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLL 289
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ + S+N L+K + K+E AH + + +L D C+
Sbjct: 290 SDMRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATYRVLADGCCR 349
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
L L VF M G P ++ L KGL D +EA +L M ++ G
Sbjct: 350 AGDFGLGLRVFNAMLASGHRPLGHTFKHLAKGLGEDGMADEACFVLEKM----AESGVWM 405
Query: 224 DIVIYRTLLFALC 236
D +R+L +C
Sbjct: 406 DAEGWRSLAACVC 418
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 18/397 (4%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
AG N+A+ L + LS +T + +N ++ + + S++ A+ + L +
Sbjct: 67 AGMANQALELVRELSGV----YTPTVFIYNGIITGLCRASRVMDAYKV-LEKMVEESIVP 121
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + +L++ LC+ ++ LA VFQEM GC P+ +Y L++ L ++EA ++
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181
Query: 210 YSMFWRISQKGS--GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
I Q+ D++ T++ LC ++ DA++ +E++ + G++ + +
Sbjct: 182 ------IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
GE + E +GG A+Y L G + K ++E+R G
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGV 295
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + G D +LE++E+ M + P V Y+ L+ LC A
Sbjct: 296 VPDVVTYSMLINTFARAGQFDASLELLED-MRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L+ M + G N TY ++DGLC+ G+ E RV E ML P V TY++++ G
Sbjct: 355 RLLELM-EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNG 413
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L G AV E + S + PD + +S ++ S+C
Sbjct: 414 LSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 164/378 (43%), Gaps = 46/378 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L SN+ +EV +MK + C+ + T I+ +RAG+++EA
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEA------- 177
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
L+ M+++ L E+ + + + ++ LC+ R
Sbjct: 178 ---------------LRVMIEQRSL--------------ELPTDVITCTTIVGGLCKASR 208
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL +EM G P+ +Y L+ G R+ E ++ ++KG +
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGELDRVIRFFEEEKARKGGSLEAA 265
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L ALC G + A + +E++ + G+ P + + + + + L+ +
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGV-VPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P + +YS + L E + + ++L+ M G P++V Y + + L K G
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGE 404
+DE V E M+K P V Y+I++ GL AG +SAV + L K S++ +
Sbjct: 385 MDEVHRVY-EMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE---GPDAA 440
Query: 405 TYGILVDGLCRDGRFLEA 422
Y +++ LCR G+ EA
Sbjct: 441 AYSMVITSLCRAGKLEEA 458
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 146/351 (41%), Gaps = 7/351 (1%)
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
A L RS K Q+ LL L + + + +F + +G +Y +++
Sbjct: 2 AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC N+A L+ + + + IY ++ LC ++ DA ++LEK++
Sbjct: 62 DGLCGAGMANQALELVRELSGVYTPT-----VFIYNGIITGLCRASRVMDAYKVLEKMVE 116
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ + P + I L + A+ + E G P+ +Y + L G I
Sbjct: 117 ESI-VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +V+ E R+ ++ + L K +D+AL+ + EEM + P Y+ L
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFM-EEMRQMGVRPNEVTYSNL 234
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G G + + ++ + G Y +D LC+ G A + +EE+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY++LI G+ ++ LE+M PD+ +S+L+ +C
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC 345
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFK--EAKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T + L ++ K++ A ++ + EA PN Y S++ L +S ++ E
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV----VTYNSVMDGLCKSGKMDE 387
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ V + M C ++ + ++AG L+ AV LF+ + +++ ++
Sbjct: 388 VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVIT 447
Query: 124 EMVKESKLEAAHILFLRSCYGWEVK----SRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+ + KLE A ++ +G EV + ++L L+ LC +R+D A + +
Sbjct: 448 SLCRAGKLEEACGMY----HGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVE 499
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 192/408 (47%), Gaps = 22/408 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T I+ G +++A++ + S+ TL+ + K ++ AA + L+
Sbjct: 143 FNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA-LQLLKRV 201
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V+ N+++D +C+ + + A ++ +M + PD + + L+ G C +L
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA LL+ M + + + L+ A C +GK+++A +L ++K +
Sbjct: 262 KEAVGLLHKMIL----ENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDI------ 311
Query: 263 RHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+D+ N DG ++I AK + + RG I ++ SY+ M L + E
Sbjct: 312 --ILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ +EMR + P++V Y + + L K G + L++++E +G P + YN +L
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ-PPNIITYNSILD 428
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + A+ L + Q G + TY +L+ GLC+ G+ +A +V E++L++ Y
Sbjct: 429 ALCKNHHVDKAIALLTNLKDQ-GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V TY V+I+G C G A+ L +M +P+ + ++ S+
Sbjct: 488 LDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSL 535
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 189/410 (46%), Gaps = 13/410 (3%)
Query: 82 VFATAIRTYAR----AGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHI 136
+F ++I Y++ + N +S F +L N FN +L +VK A
Sbjct: 32 LFPSSISLYSQLHHHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALS 91
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
L + V S + N+L++ Q + L+ VF ++ +G P+ +++ L+KGL
Sbjct: 92 LHQQMELNGIV-SDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGL 150
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C L H + ++ +G D V Y TL+ LC G+I A+Q+L+++ K L
Sbjct: 151 C----LKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK-L 205
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P + + + + + + A L ++ + + P + +++ G++ E
Sbjct: 206 VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAV 265
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+L +M + P + + + A K+G V EA ++ M K + V YN L+ G
Sbjct: 266 GLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVV-TYNSLMDG 324
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A M+ + G +AN ++Y +++GLC+ EA + EEM R P
Sbjct: 325 YCLVKEINKAKDIFDSMASR-GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIP 383
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
V TYN LI GL +GK + ++EM + + P+I ++S++ ++C N
Sbjct: 384 NVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKN 433
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 188/403 (46%), Gaps = 10/403 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F I +++ G + + S+F + + +FNTL+K + + + A + F
Sbjct: 108 FNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA-LNFHDKV 166
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
S L++ LC+ R AL + + +D + P+ Y++++ +C + +
Sbjct: 167 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 226
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N+A + ++ ++ K D +L++ C G++++A+ +L K++ + + P+
Sbjct: 227 NDA----FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN-PRMY 281
Query: 263 RHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
I + C +G+ ++ AK ++ + + I + +Y+++ I + + D
Sbjct: 282 TFSILVDAFCKEGK-VKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDS 340
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M ++G ++ Y + L K MVDEA+ + EE + +P V YN L+ GL G
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCR-KIIPNVVTYNSLIDGLGKLG 399
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ + + +M + G N TY ++D LC++ +A +L + + P + TY
Sbjct: 400 KISCVLKLVDEMHDR-GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 458
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
VLI+GLC GK +A E+++ + D+ ++ ++ C
Sbjct: 459 TVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFC 501
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 172/406 (42%), Gaps = 45/406 (11%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++ K K + N +Y +I + ++ + + ++ QM D +
Sbjct: 194 ALQLLKRVDGKL--VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL 251
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + GQL EAV L + N +F+ L+ KE K++ A ++ L +
Sbjct: 252 IYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMM-LGVTMKKD 310
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + N LMD C + + A +F M +G + +SY ++ GLC + ++EA
Sbjct: 311 IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAV 370
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L M R ++V Y +L+ L GKI ++
Sbjct: 371 NLFEEMRCR----KIIPNVVTYNSLIDGLGKLGKISCVLK-------------------- 406
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L++E RG P++ +Y+++ L + + +L ++ +G
Sbjct: 407 ----------------LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y + L + G +++A +V E+ +VKG + V Y ++++G C G A
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKG-YNLDVYTYTVMIQGFCVKGLFDAA 509
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+ L KM GC+ N +TY I++ L A ++L EM+ R
Sbjct: 510 LALLSKMEDN-GCIPNAKTYEIVILSLFEKDENDMAEKLLREMIAR 554
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 186/440 (42%), Gaps = 43/440 (9%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C SV+ IR Y R G + +++ +F+ + + + N +L +VK + + +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSV 177
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
FL+ ++ + + N+L++VLC + + ++ Q+M+ G P +Y+ ++
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R A LL M KG D+ Y L+ LC +I +L +RK
Sbjct: 238 YCKKGRFKAAIELLDHM----KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKR 292
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + + ++ + A L+NE L G P+ +++A+ +EG E
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 316 DKVLDEMRTKGFWPSLVMY-----------EAKLAALF---------------------- 342
K+ M KG PS V Y E LA F
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 343 --KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+G +DEA+ V+ EM K P + Y+ L+ G C G A + ++ + VG
Sbjct: 413 LCKNGFLDEAV-VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLS 470
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
NG Y L+ CR G EA R+ E M++ + T+NVL+ LC GK EA +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 461 LEEMISQAKLPDISVWSSLV 480
+ M S LP+ + L+
Sbjct: 531 MRCMTSDGILPNTVSFDCLI 550
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 191/471 (40%), Gaps = 40/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I S ++ +++++M F I + G EA+ +F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ S+ LL + K ++ + A ++R RI ++ D LC+
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI-DGLCK 415
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A+ + EM G PD +Y L+ G C R A ++ RI + G
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV----CRIYRVGLSP 471
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ +IY TL++ C G +++A++I E ++ +G + + C G+ E A+
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE-AEEF 530
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G +P+ S+ + N G ++ V DEM G P+ Y + L L K
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 344 DGMVDEALEVIEE----------------------------------EMVKGTFVPTVRV 369
G + EA + ++ EMV+ + +P
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y L+ GLC G + +A+++ K+ + + N Y VDG+ + G++ E+M
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P + T N +I G +GK + L EM +Q P+++ ++ L+
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 178/403 (44%), Gaps = 8/403 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + Y + G+ A+ L ++ ++N L+ ++ + +++ ++L LR
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRD 288
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N L++ + +A + EM G P+ +++ L+ G ++
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA MF+ + KG V Y LL LC + A ++ R G+ +
Sbjct: 349 FKEA----LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G ++ A L+NE G P + +YSA+ GR +++
Sbjct: 405 TYTGMIDGLCKNGF-LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ G P+ ++Y + + G + EA+ + E +++G +N+L+ LC AG
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAG 522
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A A +++ M+ G + N ++ L++G G L+A V +EM + P TY
Sbjct: 523 KVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++GLC G EA +L+ + + D ++++L+ ++C
Sbjct: 582 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 157/374 (41%), Gaps = 41/374 (10%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LK +VK+ LE HI +Q + + +L + R D A H+ +E+
Sbjct: 56 FLKWVVKQPGLETDHI--------------VQLVCITTHILVRARMYDPARHILKELSLM 101
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
+ S+ + L RL + +Y + R+ + +G
Sbjct: 102 ---SGKSSF--VFGALMTTYRLCNSNPSVYDILIRVYLR------------------EGM 138
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
IQD+++I + G + I GED+ S + E L R P +A+++
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKEMLKRKICPDVATFN 197
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG + ++ +M G+ P++V Y L K G A+E+++ K
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G V YN+L+ LC + A + L+ M K++ N TY L++G +G+ L
Sbjct: 258 GV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVL 315
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
AS++L EML P T+N LI G S G EA+ M ++ P + L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 481 ASVCCNTADLNVCR 494
+C N A+ ++ R
Sbjct: 376 DGLCKN-AEFDLAR 388
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 169/408 (41%), Gaps = 9/408 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + R KE++ ++ +++T I R G L EA+ +++ +
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+FN L+ + K K+ A F+R + S + L++
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF EM G +P +Y L+KGLC L EA L S+ + D V
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL----HAVPAAVDTV 614
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y TLL A+C G + A+ + +++++ + + C G+ + A E
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI-AILFAKE 673
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
A RG + P+ Y+ ++ G+ G ++M G P +V A + + G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+++ +++ EM P + YNILL G + + + + + + G + + T
Sbjct: 734 KIEKTNDLL-PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLT 791
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
LV G+C ++L+ + R T+N+LI C+ G+
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 189/484 (39%), Gaps = 53/484 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ L ++ ++ E +E + M D F I Y +G+ +A S+F +
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ +LLK + K L A FL+S + N L+ +C+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAE-KFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA---------------THLLYS 211
A+ +F EM + PD +Y L+ GLC + A ++Y+
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 212 MF---------WR--------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
F W+ + G DIV ++ GKI+ +L ++ +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
P + I L + +D+ + L ++ G +P + ++ + + +
Sbjct: 749 N-GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G K+L +G + ++ +G ++ A ++++ G +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD--------- 858
Query: 375 KGLCDAGNSAV--------AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
K CDA S + + M L +MSKQ G Y L++GLCR G A V
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EEM+ P + ++R L GK EA + L M+ +P I+ +++L+ +CC
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCK 976
Query: 487 TADL 490
++
Sbjct: 977 NGNV 980
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 204/494 (41%), Gaps = 50/494 (10%)
Query: 25 LTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
L A +F E + +P + Y S++ L + + E ++ + + +
Sbjct: 560 LKAFSVFDEMTKVGHHPTFF----TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-- 140
+ T + ++G L +AVSLF + Q + + + ++ +L+ + ++ K A ILF +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA-ILFAKEA 674
Query: 141 -------------SCY------------GWEVKSRIQSL---------NLLMDVLCQCRR 166
+C+ G + ++ +L N ++D + +
Sbjct: 675 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM Q P+ +Y+IL+ G +R + +T L ++ I G D +
Sbjct: 735 IEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFL--LYRSIILNGILPDKL 790
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+L+ +C+ ++ ++IL+ + +G++ + + + C +GE I A L+
Sbjct: 791 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE-INWAFDLVKV 849
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + AM L R E VL EM +G P Y + L + G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A V++EEM+ P + +++ L G + A + L+ M K + V ++
Sbjct: 910 IKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK-MKLVPTIASF 967
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C++G +EA + M + +YNVLI GLC+ G A EEM
Sbjct: 968 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027
Query: 467 QAKLPDISVWSSLV 480
L + + + +L+
Sbjct: 1028 DGFLANATTYKALI 1041
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 18/331 (5%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+ + + + +++ + G PD+ + H L+ G+C L +L
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ R G D + L+ C G+I A +++ + G+ K D C
Sbjct: 814 AFICR----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK------DTCD 863
Query: 271 C-----NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
N + ++ +++E +G P Y + L G I V +EM
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P V A + AL K G DEA ++ M+K VPT+ + L+ C GN +
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGN-VI 981
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L+ + G + +Y +L+ GLC G A + EEM + TY LI
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Query: 446 RGLCSIGKQYE-AVMWLEEMISQAKLPDISV 475
RGL + + A + L++++++ + +S+
Sbjct: 1042 RGLLARETAFSGADIILKDLLARGFITSMSL 1072
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 78 CKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAH 135
C +V +A +R A+ G+ +EA L + + + V SF TL+ K +EA
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ + S G +K + S N+L+ LC LA +++EM G + +Y L++G
Sbjct: 986 LRVVMSNCG--LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 196 L 196
L
Sbjct: 1044 L 1044
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 9/452 (1%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K+++ P AL IF +A ++ + HN Y+ ++ L + + ++ QMK ++C
Sbjct: 63 LMKRERDPQRALDIFNKASQQ-KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC 121
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH 135
++S+F +R ++R ++ + +F + V + + +T L ++ +++ A
Sbjct: 122 RFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLAR 181
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMK 194
L L + + ++ N+L+ C+ D A V +EM G YP+ +Y LM
Sbjct: 182 KLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMD 241
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
L R EA L M IS++G D VI+ ++ C G+++ A IL+ + +
Sbjct: 242 CLFAQSRSKEAVELFEDM---ISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKN 298
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + C +G+ I+ AK + +E G Y+ + L G I E
Sbjct: 299 GCNPNVYNYSALMNGFCKEGK-IQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDE 357
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K+L EM+ + Y L L +G +EAL+++++ +G + Y I+L
Sbjct: 358 AMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHL-NKGSYRIIL 416
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
LC G AV +L MSK+ G + T+ LV LC G RVL L
Sbjct: 417 NALCCNGELEKAVKFLSVMSKR-GIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGL 475
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
P +++ ++ +C K L+ + S
Sbjct: 476 IPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 1/194 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PSL + S L + G + K+L + P+ ++ + K+G +D A
Sbjct: 159 PSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFR 218
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V+EE G P Y+ L+ L S AV + M + G + + ++++G
Sbjct: 219 VVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMING 278
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
CR G A +L+ M P V Y+ L+ G C GK EA +E+ D
Sbjct: 279 FCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLD 338
Query: 473 ISVWSSLVASVCCN 486
+++L+ +C N
Sbjct: 339 TVGYTTLMNCLCRN 352
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 214/490 (43%), Gaps = 43/490 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
++ T + Q ++ K P L+ F K + H + M+ L + + + +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNK--GFSHKEQSFFLMLEFLGRARNLNVARNFL 123
Query: 69 DQMKGDSCEC---KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ S C +D F + IR+Y AG E+V LF+ + Q +FN+LL +
Sbjct: 124 FSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+K + AH LF +R YG S + N L++ C+ D A +F++M+ G
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDS--YTFNTLINGFCKNSMVDEAFRIFKDMELAG-- 239
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
+ H ++ G+ L +AT + ++V Y TL+ C + +I +
Sbjct: 240 -KVKIAHNVLSGM-----LKKATDV-------------HPNVVSYTTLVRGYCMKQEIDE 280
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI---NEALIRGGIPSLASYS 300
A+ + +L +GLK P + + + ++ + K ++ N+A P +++
Sbjct: 281 AVLVFHDMLSRGLK-PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA-PDACTFN 338
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEE 356
+ + G + KV EM P Y + L D A E+ E+
Sbjct: 339 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 398
Query: 357 EMVKGT--FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E++ G P YN + + LC G + A +++ K+ V + +Y L+ G C
Sbjct: 399 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR--GVQDPPSYKTLITGHC 456
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+G+F A +L ML R + P +ETY +LI GL IG+ A L+ M+ + LP +
Sbjct: 457 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 516
Query: 475 VWSSLVASVC 484
+ S++A +
Sbjct: 517 TFHSVLAELA 526
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 197/484 (40%), Gaps = 34/484 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYP--------NYRHNGPVYASMIGILSE 57
P +LT L I+ K+ A +F E + Y N NG SM+ E
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMV---DE 227
Query: 58 SNRITEMKE----------VIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKN 105
+ RI + E V+ M + + +V + T +R Y +++EAV +F +
Sbjct: 228 AFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 287
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ ++NTL+K + + + E IL + + N+L+ C
Sbjct: 288 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 347
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE- 223
D A+ VFQEM +PD SY +L++ LC + A L +F + G E
Sbjct: 348 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 407
Query: 224 --DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
Y + LC GK + A ++ +++++G++ P S + I C +G+ + A
Sbjct: 408 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLIT-GHCREGK-FKPAY 465
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L+ L R +P L +Y + L G + L M + P + + LA L
Sbjct: 466 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 525
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K +E+ ++ M++ + + +++ L + A + ++ + V
Sbjct: 526 AKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK 584
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
E G L C + + L+A ++ L +S ++T N +I GLC + EA
Sbjct: 585 MEELLGYL----CENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLY 640
Query: 462 EEMI 465
E++
Sbjct: 641 NELV 644
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 174/396 (43%), Gaps = 47/396 (11%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
++ LF +L FN T+SFN LL +V +L A LF + + + S N+L+
Sbjct: 152 SLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILL 211
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
L D AL V EM G PD +Y ++ C L A L F I
Sbjct: 212 KGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL----FDDIVA 267
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--IDLCPCNDGED 276
G D +Y L+ C +GK+QDA +I++++ G+K P + I+ C C +G+
Sbjct: 268 SGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVK-PNEVTYSVVIEAC-CKEGKS 325
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
IE A L E L G +P + + L +G+ E +++ +M K P +
Sbjct: 326 IE-ACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVST 384
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ L K+GMV EA + +E ++ FVP++ YN L+ GLC+
Sbjct: 385 LIYWLCKNGMVQEARGLFDE--LERGFVPSLLTYNSLIIGLCE----------------- 425
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+G EA RV ++M+ R Y P TY LI+G C IGK E
Sbjct: 426 -------------------NGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNE 466
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
+EM+++ P ++ +LV S+ + D V
Sbjct: 467 GYALFKEMVAKGCTPSKFLYQALVDSLSEPSHDDTV 502
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 11/320 (3%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+V+D+M G + T + Y G L A LF ++ + L+
Sbjct: 225 KVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGY 284
Query: 126 VKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
KL+ AA I+ G VK + +++++ C+ +S A + +EM G P
Sbjct: 285 CHRGKLQDAARIMDEMEAAG--VKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVP 342
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGEDIVIYRTLLFALCDQGKIQD 243
D ++ LC D + EA + WR + +K D + TL++ LC G +Q+
Sbjct: 343 DTPLCAKVVDVLCQDGKAGEANEI-----WRQMVKKSVPPDNTVVSTLIYWLCKNGMVQE 397
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A + ++ L +G + + + C +GE ++ A + ++ + R P+ +Y A+
Sbjct: 398 ARGLFDE-LERGFVPSLLTYNSLIIGLCENGE-LQEAGRVWDDMVERRYEPNAMTYEALI 455
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
G+ EG + EM KG PS +Y+A + +L + D ++E + G
Sbjct: 456 KGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSEPSHDDTVWTIVEAVALSGQD 515
Query: 364 VPTVRVYNILLKGLCDAGNS 383
+++ I ++ + D +
Sbjct: 516 FLDGQLWEIFIRKVVDTNET 535
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
P + NILLKGL G+ A+ L +M+ G V + TY ++ C G A
Sbjct: 200 ITPNLVSCNILLKGLVGMGDLDAALKVLDEMTGW-GIVPDVVTYTTVLTAYCAKGDLEGA 258
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++ ++++ P Y VL+ G C GK +A ++EM + P+ +S ++ +
Sbjct: 259 QQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEA 318
Query: 483 VCCNTADLNVCRKTLEQLSS 502
C + C T E L +
Sbjct: 319 CCKEGKSIEACDLTREMLGA 338
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 190/402 (47%), Gaps = 22/402 (5%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES--KLEAAHILFLRSCYGWEVKS 149
R + EA SL LS V S+NT+L + + L A L + +
Sbjct: 63 RGAPVTEACSL---LSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAA 119
Query: 150 RIQSLN--LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
R +++ +M LC RR+ A+ + + M G D +Y L++GLC+ L+ A
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179
Query: 208 LLYSMFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M GSG ++V+Y LL C G+ QD ++ E + R+G+K
Sbjct: 180 LLDEMC------GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTG 233
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C +G+ + AK + + +++ G+ P++ +Y+ + L EG + E + EM
Sbjct: 234 LIDDLCKEGKTGKAAK--VKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV--PTVRVYNILLKGLCDAGN 382
KG P +V Y +A L +DEA+ +EE M++G V P V +N ++ GLC G
Sbjct: 292 KGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEE-MIQGDTVVEPDVVTFNSVIHGLCKIGR 350
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
AV +++M + GC+ N TY L+ G R + A +++E+ I P TY+
Sbjct: 351 MTQAV-KVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYS 409
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+LI G + + A +L M + ++ + L+A++C
Sbjct: 410 ILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMC 451
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 207/452 (45%), Gaps = 33/452 (7%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R + Y ++I L +++ + E++D+M G + V++ +R Y R+G+ +
Sbjct: 155 RADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGK 214
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F+++S+ F L+ ++ KE K +AA + + G E + + N+L++
Sbjct: 215 VFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE--PNVVTYNVLINS 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ AL + +EMD +G PD +Y+ L+ GL ++EA L M
Sbjct: 273 LCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQ--GDTV 330
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN-------- 272
D+V + +++ LC G++ A+++ E + +G C CN
Sbjct: 331 VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERG-------------CMCNLVTYNYLI 377
Query: 273 ----DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
++ A +L++E I G P +YS + + +K L MR +G
Sbjct: 378 GGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK 437
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
L Y LAA+ + GM++ A+ + E M K + + Y+ ++ G C +G+
Sbjct: 438 AELFHYIPLLAAMCQQGMMERAMGLFNE-MDKNCGLDAI-AYSTMIHGACKSGDMKTVKQ 495
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
++ M + G + TY +L++ + G EA RVL++M + P V ++ LI+G
Sbjct: 496 LIQDMLDE-GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGY 554
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ G+ + + + EM ++ D + S+++
Sbjct: 555 SAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 199/458 (43%), Gaps = 84/458 (18%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS-V 82
P+ AL++ ++ R N Y ++I R+ EV+ +M+ D
Sbjct: 132 PVRALELLRQMP------RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYT 185
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+AT I + + G++ +AV +F EM+ + ++ + +++
Sbjct: 186 YATLISGWCKIGRMEDAVKVFD-------------------EMLTKGEVAPSAVMY---- 222
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
N L+ C + D+AL ++M +G +Y++LM L D R
Sbjct: 223 ------------NALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARA 270
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
++A Y++ + + G D+ Y L+ C +G + A+++ E++ +KG++A
Sbjct: 271 SDA----YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA---- 322
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ +Y+++ +G++ E D++ +
Sbjct: 323 --------------------------------TAVTYTSLIYVFSRKGQVQETDRLFNVA 350
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG P +VMY A + + G ++ A E++ E M K P YN L++G C G
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE-MEKKRIPPDDMTYNTLMRGFCLLGR 409
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A + +M+K+ G + +Y L+ G G +A RV +EM+ + + P + TYN
Sbjct: 410 LDEARTLIDEMTKR-GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYN 468
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LI+GLC I + +A ++EM+++ PD S + SL+
Sbjct: 469 ALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 162/366 (44%), Gaps = 42/366 (11%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N+++ LC + AL + ++M P+ +Y+ ++ G C R+ A ++ M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
R G D Y TL+ C G+++DA+++ +++L KG AP + + +
Sbjct: 174 RER---GGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D ++ A + + RG ++A+Y+ + L+ + R + VL+EM+ GF P +
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKG------TFV---------------------- 364
Y + K+G +ALEV EE KG T+
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVA 350
Query: 365 ------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P V +YN L+ C G+ A + +M K+ + TY L+ G C GR
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK-RIPPDDMTYNTLMRGFCLLGR 409
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA +++EM R P + +YN LI G G +A+ +EM+ + P + +++
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469
Query: 479 LVASVC 484
L+ +C
Sbjct: 470 LIQGLC 475
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E++ +M+ D + T +R + G+L+EA +L +++ S+NTL+
Sbjct: 380 EIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGY 439
Query: 126 VKESKLEAAHILFLRS-CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ ++ A L +R + + N L+ LC+ R+ D A ++ +EM +G P
Sbjct: 440 SMKGDIKDA--LRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497
Query: 185 DRESYHILMKGLCN-DRRL 202
D +Y L++GL D R+
Sbjct: 498 DDSTYISLIEGLTTEDERM 516
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 162/341 (47%), Gaps = 13/341 (3%)
Query: 139 LRSCYG-WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
++ C+ WE+ R + S N++M L + D + + + M G D +Y IL
Sbjct: 41 IKDCFELWEMMGREGSRSVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGIL 100
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C + +N++ H+L +KG D Y ++ LC + K+ A+ +L ++
Sbjct: 101 VHGFCKNGYINKSLHVLEIA----ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMI 156
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ G K P + + + E A ++ E P+L +YS + L R
Sbjct: 157 KSGCK-PNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERF 215
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++ EM KG PS++ Y + L V+ AL++ + KG F P V+++NI
Sbjct: 216 GEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKG-FKPDVQMHNI 274
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ GLC G + +A++ M++ C N T+ L++G +D A + +L
Sbjct: 275 LIHGLCSVGKTQLALLLYLDMNRW-NCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRN 333
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
P + +YN+ ++GLCS + +A+++L + +++ +P I
Sbjct: 334 GLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTI 374
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + R G S+AS++ M L++ G++ E +L+ M+ GF + Y + K+G
Sbjct: 49 EMMGREGSRSVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNG 108
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++++L V+E KG + Y+ ++ GLC AV L M K GC N
Sbjct: 109 YINKSLHVLEIAERKGGVLDAF-AYSAMINGLCKEAKLDKAVSVLNGMIKS-GCKPNAHV 166
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L++GL +F +A RV+ EM + P + TY+ LI GLC + + EA ++EM+
Sbjct: 167 YNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEML 226
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P + +S L+ +C
Sbjct: 227 ZKGLNPSVITYSLLMKGLC 245
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 8/319 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D A V++E+ PD Y+ ++ G R+ + L W + +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFEL-----WEMMGREG 55
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + ++ L D GK+ + + ILE + + G + C +G I +
Sbjct: 56 SRSVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGY-INKSL 114
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ A +GG+ +YSAM L E ++ + VL+ M G P+ +Y A + L
Sbjct: 115 HVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++A+ V+ E M PT+ Y+ L+ GLC A +K+M ++ G
Sbjct: 175 VGASKFEDAVRVVRE-MGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZK-GLNP 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +L+ GLC + A ++ ++ + + P V+ +N+LI GLCS+GK A++
Sbjct: 233 SVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLY 292
Query: 462 EEMISQAKLPDISVWSSLV 480
+M P++ ++L+
Sbjct: 293 LDMNRWNCAPNLVTHNTLM 311
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
++ I + D V+Y +L G+I+D ++ E + R+G ++ S I +
Sbjct: 12 VYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGSRSVAS--FNIMMRGL 69
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
D ++ S++ G I +Y + G I + VL+ KG
Sbjct: 70 FDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLDA 129
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
Y A + L K+ +D+A+ V+ M+K P VYN L+ GL A AV ++
Sbjct: 130 FAYSAMINGLCKEAKLDKAVSVLNG-MIKSGCKPNAHVYNALINGLVGASKFEDAVRVVR 188
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M C TY L++GLC+ RF EA +++EML + P V TY++L++GLC
Sbjct: 189 EMG-TTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLG 247
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K A+ ++ S+ PD+ + + L+ +C
Sbjct: 248 HKVEMALQLXNQVTSKGFKPDVQMHNILIHGLC 280
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 50/340 (14%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
L ++ ++ E+ +++ MK S +DS+ + + + + G +N+++ + + + V
Sbjct: 69 LFDNGKVDEVISILELMK-KSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVL 127
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+++ ++ + KE+KL+ A + L K N L++ L + + A+ V
Sbjct: 128 DAFAYSAMINGLCKEAKLDKA-VSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRV 186
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+EM C P +Y L+ GLC R EA L+ M ZKG ++ Y L+
Sbjct: 187 VREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEML----ZKGLNPSVITYSLLMK 242
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC K++ A+Q+ ++ KG K P + H I LI+ G+
Sbjct: 243 GLCLGHKVEMALQLXNQVTSKGFK-PDVQMHNI----------------LIH------GL 279
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW---PSLVMYEAKLAALFKDGMVDEA 350
S+ + +A+ LY LD R W P+LV + + +KD + A
Sbjct: 280 CSVGK-TQLALLLY-----------LDMNR----WNCAPNLVTHNTLMEGFYKDDDIRNA 323
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
L VI +++ P + YNI LKGLC + A+++L
Sbjct: 324 L-VIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFL 362
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++MI L + ++ + V++ M C+ V+ I A + +AV + + +
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVREMG 191
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
NC +++TL+ + K + A+ L ++ + + + +LLM LC +
Sbjct: 192 TTNCSPTLVTYSTLINGLCKVERFGEAYDL-VKEMLZKGLNPSVITYSLLMKGLCLGHKV 250
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
++AL + ++ +G PD + ++IL+ GLC+ + T L ++ +++ ++V
Sbjct: 251 EMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGK----TQLALLLYLDMNRWNCAPNLVT 306
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLI 284
+ TL+ I++A+ I +ILR GL+ P + I LC CN I A +
Sbjct: 307 HNTLMEGFYKDDDIRNALVIWARILRNGLQ-PDIISYNITLKGLCSCN---RISDAILFL 362
Query: 285 NEALIRGGIPSLAS 298
++A+ + +P++ +
Sbjct: 363 HDAVTKKIVPTIIT 376
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 7/214 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N VY ++I L +++ + V+ +M +C ++T I + + EA
Sbjct: 161 KPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYD 220
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L K + Z +++ L+K + K+E A + K +Q N+L+ L
Sbjct: 221 LVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMA-LQLXNQVTSKGFKPDVQMHNILIHGL 279
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKG 220
C ++ LAL ++ +M+ C P+ +++ LM+G D + A + W RI + G
Sbjct: 280 CSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNAL-----VIWARILRNG 334
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
DI+ Y L LC +I DA+ L + K
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ I +L L++ CQ R A+ + MD G P+ Y+ ++ GLC +R LN A
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ Y M +KG D V Y TL+ L + G+ DA ++L ++++ + +
Sbjct: 731 VFYCM----EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+G +E A++L E + R +P++ +Y+++ G + + + D M +KG
Sbjct: 787 DTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+P +V Y + K V++ +++ E +G V YN L+ G C AG VA
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTLIHGYCQAGKLNVAQ 904
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+M G + TY IL+D LC +G+ +A ++E++ + TYN++I+G
Sbjct: 905 KVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 963
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC K EA + + PD + ++++ +C
Sbjct: 964 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 171/407 (42%), Gaps = 44/407 (10%)
Query: 81 SVFATAIRT-YARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
S + +RT + + + +A +LF + + F LL + E I F
Sbjct: 36 SDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFS 94
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + + + S +L+ C+C R AL V +M G P ++ L+ G C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R+ +A +S+ + + G ++V+Y TL+ LC G++ A+++L ++ +KGL A
Sbjct: 155 NRIGDA----FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA- 209
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ +Y+ + L GR + ++L
Sbjct: 210 -----------------------------------DVVTYNTLLTGLCYSGRWSDAARML 234
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M + P +V + A + K G +DEA E + +EM++ + P YN ++ GLC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE-LYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G A M+ + GC N TY L+ G C+ E ++ + M + +
Sbjct: 294 HGRLYDAKKTFDLMASK-GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN LI G C +GK A+ M+S+ PDI L+ +C N
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 178/390 (45%), Gaps = 8/390 (2%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+ ++A SLF + Q + F +L + K +K + L+ + + S
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSF 642
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+L+ C+C R LAL + +M G P + L+ G C R EA L+ SM
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-- 700
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
G ++VIY T++ LC + +A+++ + +KG++A + + N G
Sbjct: 701 --DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 758
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ A+ L+ + + R P++ ++A+ EG ++E + EM + P++ Y
Sbjct: 759 RWTDAAR-LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + G + +A + + + KG F P V YN L+ G C + + +M+
Sbjct: 818 NSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMT 876
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q G V + TY L+ G C+ G+ A +V M+ P + TYN+L+ LC+ GK
Sbjct: 877 YQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A++ +E++ DI ++ ++ +C
Sbjct: 936 EKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 46/360 (12%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+E I + L+ C R A + M G P+ Y+ L+ GLC + LN
Sbjct: 136 GYE--PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M +KG G D+V Y TLL LC G+ DA ++L ++++ +
Sbjct: 194 IALELLNEM----EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ G +++ A+ L E + P+ +Y+++ L GR+ + K D M
Sbjct: 250 TALIDVFVKQG-NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+KG +P++V Y ++ K MVDE +++ + +G F + YN L+ G C G
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG-FNADIFTYNTLIHGYCQVGKL 367
Query: 384 AVAV-----MYLKKMSKQV--------GCVANGE---------------------TYGIL 409
VA+ M ++++ + G NGE Y I+
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLC+ + +A + + + P TY ++I GLC G + EA +E+I + K
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA----DELIRRMK 483
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 16/323 (4%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K + AL++F ++K R + Y ++I LS S R T+ ++ M +
Sbjct: 721 KNRDLNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 778
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF- 138
F I T+ + G L EA +L+K + + + V ++N+L+ L A +F
Sbjct: 779 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 838
Query: 139 ---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ C+ + + N L+ C+ +R + + +F EM +QG D +Y+ L+ G
Sbjct: 839 LMVSKGCF-----PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C +LN A +F R+ G DIV Y LL LC+ GKI+ A+ ++E + +
Sbjct: 894 YCQAGKLNVAQ----KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ + I C + ++ A L +G P +Y M L +G E
Sbjct: 950 MDVDIITYNIIIQGLCRT-DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 1008
Query: 316 DKVLDEMRTKGFWPSLVMYEAKL 338
DK+ M+ GF PS +Y+ L
Sbjct: 1009 DKLCRRMKEDGFMPSERIYDETL 1031
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 164/406 (40%), Gaps = 43/406 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + S++ + NR E ++D M G ++ T I + LN A+
Sbjct: 670 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + + ++NTL+ + + A L LR ++ + L+D
Sbjct: 730 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL-LRDMVKRKIDPNVIFFTALIDT 788
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ A ++++EM + P+ +Y+ L+ G C L +A + MF + KG
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY----MFDLMVSKG 844
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y TL+ C +++D M++ ++ +G
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG------------------------- 879
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L+ +A +Y+ + G++ KV + M G P +V Y L
Sbjct: 880 --LVGDAF---------TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 928
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L +G +++AL V+ E++ K + YNI+++GLC A + ++++ G
Sbjct: 929 LCNNGKIEKAL-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVK 986
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ Y ++ GLCR G EA ++ M + P Y+ +R
Sbjct: 987 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 154/366 (42%), Gaps = 45/366 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N VY ++I L ++ + E++++M+ + T + +G+ ++A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ +++ + + +F L+ VK+ L+ A L+ + V + N +++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY-KEMIQSSVDPNNVTYNSIING 290
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC R A F M +GC+P+ +Y+ L+ G C R ++E L F R+S +G
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL----FQRMSCEG 346
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEG 279
DI Y TL+ C GK++ A+ I ++ + + P H I L C +GE
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV-TPDIITHCILLHGLCVNGE---- 401
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
I AL++ D+MR + +V Y +
Sbjct: 402 ----IESALVK----------------------------FDDMRESEKYIGIVAYNIMIH 429
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ-VG 398
L K V++A E+ V+G P R Y I++ GLC G A +++M ++ +
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGV-KPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Query: 399 CVANGE 404
C N E
Sbjct: 489 CQMNAE 494
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 195/500 (39%), Gaps = 79/500 (15%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + KQ + A +++KE + + N Y S+I L R+ + K
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNVTYNSIINGLCMHGRLYDAK 301
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS--QFNCVNWTQSFNTLLK 123
+ D M C + T I + + ++E + LF+ +S FN +T +NTL+
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT--YNTLIH 359
Query: 124 EMVKESKLEAA------------------HILFLRS-CYGWEVKSR-------------- 150
+ KL A H + L C E++S
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 151 -IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
I + N+++ LC+ + + A +F + +G PD +Y I++ GLC + EA L+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ-------ILEKILRKGLKAPKSR 262
R+ ++G +C D ++ + LR+ + KS
Sbjct: 480 ----RRMKEEG-------------IICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSN 522
Query: 263 RHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLA---SYSAMAID------LYNEGRI 312
+ L P ++G L RG P + S+S + L NE
Sbjct: 523 PFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHC 582
Query: 313 VEGDKVLD---EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
++ D EM PS+V + L + K D + + +M +
Sbjct: 583 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVI-YLYHKMENLGISHDLYS 641
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+ IL+ C ++A+ L KM K +G + T G L++G C+ RF EA +++ M
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMK-LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700
Query: 430 LIRSYWPCVETYNVLIRGLC 449
+ P V YN +I GLC
Sbjct: 701 DGFGFVPNVVIYNTVINGLC 720
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ I +L L++ CQ R A+ + MD G P+ Y+ ++ GLC +R LN A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ Y M +KG D V Y TL+ L + G+ DA ++L ++++ + +
Sbjct: 206 VFYCM----EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
+G +E A++L E + R +P++ +Y+++ G + + + D M +KG
Sbjct: 262 DTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
+P +V Y + K V++ +++ E +G V YN L+ G C AG VA
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
+M G + TY IL+D LC +G+ +A ++E++ + TYN++I+G
Sbjct: 380 KVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC K EA + + PD + ++++ +C
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 179/390 (45%), Gaps = 8/390 (2%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+ ++A SLF + Q + F +L + K +K + L+ + + + S
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSF 117
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
+L+ C+C R LAL + +M G P + L+ G C R EA L+ SM
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-- 175
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
G ++VIY T++ LC + +A+++ + +KG++A + + N G
Sbjct: 176 --DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ A+ L+ + + R P++ ++A+ EG ++E + EM + P++ Y
Sbjct: 234 RWTDAAR-LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ + G + +A + + + KG F P V YN L+ G C + + +M+
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q G V + TY L+ G C+ G+ A +V M+ P + TYN+L+ LC+ GK
Sbjct: 352 YQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A++ +E++ DI ++ ++ +C
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 16/323 (4%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K + AL++F ++K R + Y ++I LS S R T+ ++ M +
Sbjct: 196 KNRDLNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF- 138
F I T+ + G L EA +L+K + + + V ++N+L+ L A +F
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 139 ---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ C+ + + N L+ C+ +R + + +F EM +QG D +Y+ L+ G
Sbjct: 314 LMVSKGCF-----PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C +LN A +F R+ G DIV Y LL LC+ GKI+ A+ ++E + +
Sbjct: 369 YCQAGKLNVAQ----KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ + I C + ++ A L +G P +Y M L +G E
Sbjct: 425 MDVDIITYNIIIQGLCRT-DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 316 DKVLDEMRTKGFWPSLVMYEAKL 338
DK+ M+ GF PS +Y+ L
Sbjct: 484 DKLCRRMKEDGFMPSERIYDETL 506
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 164/406 (40%), Gaps = 43/406 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + S++ + NR E ++D M G ++ T I + LN A+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + + ++NTL+ + + A L LR ++ + L+D
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL-LRDMVKRKIDPNVIFFTALIDT 263
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ A ++++EM + P+ +Y+ L+ G C L +A + MF + KG
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY----MFDLMVSKG 319
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y TL+ C +++D M++ ++ +G
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG------------------------- 354
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L+ +A +Y+ + G++ KV + M G P +V Y L
Sbjct: 355 --LVGDAF---------TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L +G +++AL V+ E++ K + YNI+++GLC A + ++++ G
Sbjct: 404 LCNNGKIEKAL-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVK 461
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ Y ++ GLCR G EA ++ M + P Y+ +R
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 75/402 (18%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+Q+ LL D LC+ + A+ V + M G PD SY L+ LC + A L+
Sbjct: 98 VQATQLLYD-LCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVE 156
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M G + V Y TL+ LC G + ++Q L+++++KGL P + + L
Sbjct: 157 KM----EDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGL-VPNAFTYSSLLEA 211
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF--- 327
+ A L++E + +GG P+L SY+ + L EGRI E ++ + +KGF
Sbjct: 212 AYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPN 271
Query: 328 ----------------W----------------PSLVMYEAKLAALFKDGMVDEALEVIE 355
W PS+V Y + +L G +++AL+VI+
Sbjct: 272 VVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVID 331
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGN-----------------------SAVAVM-YLK 391
E M+ G F PT YN ++ LC G +A+AV+ Y
Sbjct: 332 E-MMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEG 390
Query: 392 KMSKQVGCVAN---------GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
K+ + + + + Y +V LC+ G A +L EM + P TY+
Sbjct: 391 KVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYS 450
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LIRGLC G YEA+ + + PDI +++L+ C
Sbjct: 451 SLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFC 492
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 186/401 (46%), Gaps = 9/401 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L + + +++++M+ + T ++ G LN+++ L
Sbjct: 135 YTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLM 194
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
Q V ++++LL+ KE + A + L + + S N+L+ LC+ R
Sbjct: 195 QKGLVPNAFTYSSLLEAAYKERGVNEA-MRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRI 253
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A+ +F+ + +G P+ SY+IL++ LC + R EA LL M R IV
Sbjct: 254 EEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGR----ERSPSIVT 309
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ +L GKI+ A+Q++++++ K + + I C +G+ +E + +++
Sbjct: 310 YNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGK-VEAVVNCLDQM 368
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P+ +++A+A+ Y EG++ E ++ + K Y+ ++ L K G
Sbjct: 369 IFGRCSPNEGTFNAIAVLCY-EGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNT 427
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A ++ EM K F P Y+ L++GLC G M + K+ ++ + + +
Sbjct: 428 YPAF-LLLYEMTKYGFTPDSYTYSSLIRGLCIEG-MLYEAMEIFKLLEEDHYRPDIDNFN 485
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L+ G C+ R + V E M+ + Y P TY +L+ G+
Sbjct: 486 ALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGI 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
D R+++A + I + G D+V LL+ LC K++ A++++E ++ G+
Sbjct: 75 DMRISDA----FFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIP 130
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + C G ++ A L+ + G + +Y+ + L G + + +
Sbjct: 131 DAASYTFLVNHLCKRG-NVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQF 189
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
LD + KG P+ Y + L A +K+ V+EA+ +++E + KG P + YN+LL GLC
Sbjct: 190 LDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGG-QPNLVSYNVLLTGLC 248
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A+ K + + G N +Y IL+ LC +GR+ EA+ +L EM R P +
Sbjct: 249 KEGRIEEAIRLFKNLPSK-GFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSI 307
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN+LI L GK +A+ ++EM+ P + ++ ++A +C
Sbjct: 308 VTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLC 353
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 195/429 (45%), Gaps = 9/429 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L +SN++ + V++ M + + + + G + A+ L + +
Sbjct: 107 LCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPAN 166
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T ++NTL+K + L + + FL + + + L++ + R + A+ +
Sbjct: 167 TVTYNTLVKGLCMHGNLNKS-LQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLL 225
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
E+ +G P+ SY++L+ GLC + R+ EA L F + KG ++V Y LL +
Sbjct: 226 DEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRL----FKNLPSKGFSPNVVSYNILLRS 281
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G+ ++A ++L ++ + ++P + I + IE A +I+E ++ P
Sbjct: 282 LCYEGRWEEANELLAEMNGRE-RSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKP 340
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SY+ + L EG++ LD+M P+ + A +A L +G V EA +I
Sbjct: 341 TATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLI 399
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ K Y ++ LC GN+ A + L +M+K G + TY L+ GLC
Sbjct: 400 QSLGNKQN-SSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTK-YGFTPDSYTYSSLIRGLC 457
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+G EA + + + Y P ++ +N LI G C + ++ E MI + P +
Sbjct: 458 IEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSET 517
Query: 475 VWSSLVASV 483
++ LV +
Sbjct: 518 TYTILVEGI 526
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 46/350 (13%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ + + E ++D++ + + + + G++ EA+ LF
Sbjct: 201 NAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLF 260
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
KNL S+N LL+ + E + E A+ L L G E I + N+L+ L
Sbjct: 261 KNLPSKGFSPNVVSYNILLRSLCYEGRWEEANEL-LAEMNGRERSPSIVTYNILIGSLAF 319
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-FWRIS-QKGS 221
+ + AL V EM P SY+ ++ LC + ++ + L M F R S +G+
Sbjct: 320 HGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGT 379
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
I + LC +GK+Q+A +++ + K + + C C G + A
Sbjct: 380 FNAIAV-------LCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKG-NTYPAF 431
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEG---------RIVEGD---------------- 316
L+ E G P +YS++ L EG +++E D
Sbjct: 432 LLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGF 491
Query: 317 ----------KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+V + M KG+ PS Y + + + + A EV+ E
Sbjct: 492 CKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRE 541
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 70/164 (42%), Gaps = 1/164 (0%)
Query: 52 IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
I +L ++ E +I + + + + G A L ++++
Sbjct: 383 IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGF 442
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+ ++++L++ + E L A +F + + I + N L+ C+ R+DL+L
Sbjct: 443 TPDSYTYSSLIRGLCIEGMLYEAMEIF-KLLEEDHYRPDIDNFNALILGFCKSHRTDLSL 501
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
VF+ M +G P +Y IL++G+ ++ A +L + R
Sbjct: 502 EVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLR 545
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 186/440 (42%), Gaps = 43/440 (9%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C SV+ IR Y R G + +++ +F+ + + + N +L +VK + + +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSV 217
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
FL+ ++ + + N+L++VLC + + ++ Q+M+ G P +Y+ ++
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R A LL M KG D+ Y L+ LC +I +L +RK
Sbjct: 278 YCKKGRFKAAIELLDHM----KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKR 332
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + + ++ + A L+NE L G P+ +++A+ +EG E
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 316 DKVLDEMRTKGFWPSLVMY-----------EAKLAALF---------------------- 342
K+ M KG PS V Y E LA F
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 343 --KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K+G +DEA+ V+ EM K P + Y+ L+ G C G A + ++ + VG
Sbjct: 453 LCKNGFLDEAV-VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLS 510
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
NG Y L+ CR G EA R+ E M++ + T+NVL+ LC GK EA +
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 461 LEEMISQAKLPDISVWSSLV 480
+ M S LP+ + L+
Sbjct: 571 MRCMTSDGILPNTVSFDCLI 590
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 191/471 (40%), Gaps = 40/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I S ++ +++++M F I + G EA+ +F
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ S+ LL + K ++ + A ++R RI ++ D LC+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI-DGLCK 455
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A+ + EM G PD +Y L+ G C R A ++ RI + G
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV----CRIYRVGLSP 511
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ +IY TL++ C G +++A++I E ++ +G + + C G+ E A+
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE-AEEF 570
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G +P+ S+ + N G ++ V DEM G P+ Y + L L K
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 344 DGMVDEALEVIEE----------------------------------EMVKGTFVPTVRV 369
G + EA + ++ EMV+ + +P
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y L+ GLC G + +A+++ K+ + + N Y VDG+ + G++ E+M
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P + T N +I G +GK + L EM +Q P+++ ++ L+
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 178/403 (44%), Gaps = 8/403 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + Y + G+ A+ L ++ ++N L+ ++ + +++ ++L LR
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRD 328
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N L++ + +A + EM G P+ +++ L+ G ++
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA MF+ + KG V Y LL LC + A ++ R G+ +
Sbjct: 389 FKEA----LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G ++ A L+NE G P + +YSA+ GR +++
Sbjct: 445 TYTGMIDGLCKNGF-LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ G P+ ++Y + + G + EA+ + E +++G +N+L+ LC AG
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAG 562
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A A +++ M+ G + N ++ L++G G L+A V +EM + P TY
Sbjct: 563 KVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++GLC G EA +L+ + + D ++++L+ ++C
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 157/374 (41%), Gaps = 41/374 (10%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LK +VK+ LE HI +Q + + +L + R D A H+ +E+
Sbjct: 96 FLKWVVKQPGLETDHI--------------VQLVCITTHILVRARMYDPARHILKELSLM 141
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
+ S+ + L RL + +Y + R+ + +G
Sbjct: 142 ---SGKSSF--VFGALMTTYRLCNSNPSVYDILIRVYLR------------------EGM 178
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
IQD+++I + G + I GED+ S + E L R P +A+++
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKEMLKRKICPDVATFN 237
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG + ++ +M G+ P++V Y L K G A+E+++ K
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G V YN+L+ LC + A + L+ M K++ N TY L++G +G+ L
Sbjct: 298 GV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVL 355
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
AS++L EML P T+N LI G S G EA+ M ++ P + L+
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 481 ASVCCNTADLNVCR 494
+C N A+ ++ R
Sbjct: 416 DGLCKN-AEFDLAR 428
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 169/408 (41%), Gaps = 9/408 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + R KE++ ++ +++T I R G L EA+ +++ +
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+FN L+ + K K+ A F+R + S + L++
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A VF EM G +P +Y L+KGLC L EA L S+ + D V
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL----HAVPAAVDTV 654
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y TLL A+C G + A+ + +++++ + + C G+ + A E
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI-AILFAKE 713
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
A RG + P+ Y+ ++ G+ G ++M G P +V A + + G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+++ +++ EM P + YNILL G + + + + + + G + + T
Sbjct: 774 KIEKTNDLL-PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLT 831
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
LV G+C ++L+ + R T+N+LI C+ G+
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 189/484 (39%), Gaps = 53/484 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ L ++ ++ E +E + M D F I Y +G+ +A S+F +
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ +LLK + K L A FL+S + N L+ +C+
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAE-KFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA---------------THLLYS 211
A+ +F EM + PD +Y L+ GLC + A ++Y+
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 212 MF---------WR--------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
F W+ + G DIV ++ GKI+ +L ++ +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
P + I L + +D+ + L ++ G +P + ++ + + +
Sbjct: 789 N-GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G K+L +G + ++ +G ++ A ++++ G L
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI---------SLD 898
Query: 375 KGLCDAGNSAV--------AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
K CDA S + + M L +MSKQ G Y L++GLCR G A V
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EEM+ P + ++R L GK EA + L M+ +P I+ +++L+ +CC
Sbjct: 958 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCK 1016
Query: 487 TADL 490
++
Sbjct: 1017 NGNV 1020
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 204/494 (41%), Gaps = 50/494 (10%)
Query: 25 LTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
L A +F E + +P + Y S++ L + + E ++ + + +
Sbjct: 600 LKAFSVFDEMTKVGHHPTFF----TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-- 140
+ T + ++G L +AVSLF + Q + + + ++ +L+ + ++ K A ILF +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA-ILFAKEA 714
Query: 141 -------------SCY------------GWEVKSRIQSL---------NLLMDVLCQCRR 166
+C+ G + ++ +L N ++D + +
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM Q P+ +Y+IL+ G +R + +T L ++ I G D +
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFL--LYRSIILNGILPDKL 830
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+L+ +C+ ++ ++IL+ + +G++ + + + C +GE I A L+
Sbjct: 831 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE-INWAFDLVKV 889
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + AM L R E VL EM +G P Y + L + G
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A V++EEM+ P + +++ L G + A + L+ M K + V ++
Sbjct: 950 IKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK-MKLVPTIASF 1007
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C++G +EA + M + +YNVLI GLC+ G A EEM
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067
Query: 467 QAKLPDISVWSSLV 480
L + + + +L+
Sbjct: 1068 DGFLANATTYKALI 1081
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 18/331 (5%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L+ + + + +++ + G PD+ + H L+ G+C L +L
Sbjct: 794 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 853
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ R G D + L+ C G+I A +++ + G+ K D C
Sbjct: 854 AFICR----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK------DTCD 903
Query: 271 C-----NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
N + ++ +++E +G P Y + L G I V +EM
Sbjct: 904 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P V A + AL K G DEA ++ M+K VPT+ + L+ C GN +
Sbjct: 964 KICPPNVAESAMVRALAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGN-VI 1021
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ L+ + G + +Y +L+ GLC G A + EEM + TY LI
Sbjct: 1022 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Query: 446 RGLCSIGKQYE-AVMWLEEMISQAKLPDISV 475
RGL + + A + L++++++ + +S+
Sbjct: 1082 RGLLARETAFSGADIILKDLLARGFITSMSL 1112
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 78 CKDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK-LEAAH 135
C +V +A +R A+ G+ +EA L + + + V SF TL+ K +EA
Sbjct: 966 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
+ + S G +K + S N+L+ LC LA +++EM G + +Y L++G
Sbjct: 1026 LRVVMSNCG--LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Query: 196 L 196
L
Sbjct: 1084 L 1084
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 186/438 (42%), Gaps = 44/438 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F+ I +AG+L EAV + + + +CV + N LL + + ++ A +F
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF--- 61
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMK------ 194
G + + +LN+L++ C+ + D AL +F EM+ P+ +Y ++K
Sbjct: 62 -RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 195 ---------------------------GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
G C +R++EA LL M + +K + DIV
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM---VEKKSAKPDIVA 177
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL-INE 286
+ ++ C G++++A ++LE ++ G + C G E + +
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ P++ +++A+ L R+ +++ +M+ + Y + L K G
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E V EE + +G P+V Y L+ C AG+ A ++ M + G + TY
Sbjct: 298 TSEVSRVFEEMLREGCN-PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK-GIPPDVTTY 355
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++GL +G+ A+ E++L PC Y+ L+RG C EAV + EM+
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD + LV +C
Sbjct: 416 RRLAPDPATCKLLVEMLC 433
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 18/306 (5%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+R ++ +L+ GLC RL EA M R DI + LL +LC G +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNL-RDINL---LLASLCQAGTMDQ 56
Query: 244 AMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSA 301
AM I +G++ +P I + + + ++ A L +E +P +Y+A
Sbjct: 57 AMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF-KDGMVDEALEVIEEEMVK 360
+ R+ + ++L+E S V+ +A F K VDEA +++ + + K
Sbjct: 112 IIKCYCKMDRLDQARQLLEE---SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEK 168
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
+ P + +N+++ G C AG A L+ + +GCV N TY L+DG C+ G
Sbjct: 169 KSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLV-SMGCVPNAVTYTTLIDGFCKSGNLS 227
Query: 421 EASRVLEEMLIRSYW--PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA ++ + + R + P V T+N LI GLC + A +++M ++ D +++
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287
Query: 479 LVASVC 484
L+ +C
Sbjct: 288 LMDGLC 293
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P +++L+ GLC AG AV +M ++ CV N +L+ LC+ G +A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGTMDQAMA 59
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ-AKLPDISVWSSLVASV 483
+ + P V T N+LI G C + +A+ EM A +P+ + +++++
Sbjct: 60 IFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 484 CCNTADLNVCRKTLEQLSSCS 504
C L+ R+ LE+ S CS
Sbjct: 117 -CKMDRLDQARQLLEESSCCS 136
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 14/405 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I +Y +AG +++A+ F +++ NC ++ +N + +V++S+ + A + R
Sbjct: 12 YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ + S S + LC+ + L + ++MD G PD +Y+I + LC + +
Sbjct: 72 PQGFSLNSFTYSR--FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A ++ +M +KG DIV Y ++ LC G+ A++I ++RKG +
Sbjct: 130 LDVALGVVQTMV----EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEK 185
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVLD 320
+ L C+DG+ ++ A L A+ RG I S + Y+++ G I + ++
Sbjct: 186 ACRALVLGLCHDGK-VDLAYELTVGAM-RGRIKFSKSIYNSLINGFCQAGWIDKAQSIIS 243
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
MR G P LV Y L D ++ E E + ++M + P V YN LLKGLC A
Sbjct: 244 FMRRNGCEPDLVTYNVLLNYCC-DELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKA 302
Query: 381 GNSAVA-VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A +M + KM + C + +Y ++ LC A ++ EEM + P V
Sbjct: 303 NRLDKAYMMMVNKMEAKGLC--DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVV 360
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ +LI+ G A L++M LPD +++++V +C
Sbjct: 361 TFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLC 405
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 216/512 (42%), Gaps = 43/512 (8%)
Query: 12 TYLSQIIKKQKSPLT--ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
Y +QI K+ L ALK F E + N R Y IG+L +R ++ D
Sbjct: 11 AYRAQISSYVKAGLIDQALKTFDEMTKS--NCRVFSIDYNRFIGVLVRQSRFDLAEQYYD 68
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+M ++ I + L +++ + V ++N L + E+
Sbjct: 69 RMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCEN 128
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+L+ A + +++ + I + ++++ LC+ R D A+ +++ M +G PD ++
Sbjct: 129 QLDVA-LGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKAC 187
Query: 190 HILMKGLCNDRRLNEATHL-LYSMFWRIS------------------------------Q 218
L+ GLC+D +++ A L + +M RI +
Sbjct: 188 RALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRR 247
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGED 276
G D+V Y LL CD+ +++A +++K+ R G++ + + LC N
Sbjct: 248 NGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR--- 304
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
++ A ++ + G+ + SY+ + L K+ +EM KG P +V +
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ A ++G + A +++++ M +P +Y ++ LC G +A M +
Sbjct: 365 LIKAFLREGSSNIAKKLLDQ-MTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVES 423
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + +Y L++GLCR R EA + E+M P T+ ++I GL K
Sbjct: 424 -GITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSV 482
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
A ++M+ + D +V +LV ++ N A
Sbjct: 483 ACRVWDQMMEKGFTLDGAVSETLVNAIHSNDA 514
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 18/397 (4%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
AG N+A+ L + LS +T + +N ++ + + S++ A+ + L +
Sbjct: 67 AGMANQALELVRELSGV----YTPTLFIYNGIITGLCRASRVMDAYKV-LEKMVEESIVP 121
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ + +L++ LC+ ++ LA VFQEM GC P+ +Y L++ L ++EA ++
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181
Query: 210 YSMFWRISQKGS--GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
I Q+ D++ T++ LC ++ DA++ +E++ + G++ + +
Sbjct: 182 ------IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
GE + E +GG A+Y L G + K ++E+R G
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGV 295
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + G D +LE++E+ M + P V Y+ L+ LC A
Sbjct: 296 VPDVVTYSMLINTFARAGQFDASLELLED-MRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L+ M + G N TY ++DGLC+ G+ E RV E ML P V TY++++ G
Sbjct: 355 RLLELM-EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNG 413
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L G AV E + S + PD + +S ++ S+C
Sbjct: 414 LSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 164/378 (43%), Gaps = 46/378 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L SN+ +EV +MK + C+ + T I+ +RAG+++EA
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEA------- 177
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
L+ M+++ L E+ + + + ++ LC+ R
Sbjct: 178 ---------------LRVMIEQRSL--------------ELPTDVITCTTIVGGLCKASR 208
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL +EM G P+ +Y L+ G R+ E ++ ++KG +
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGELDRVIRFFEEEKARKGGSLEAA 265
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L ALC G + A + +E++ + G+ P + + + + + L+ +
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGV-VPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G P + +YS + L E + + ++L+ M G P++V Y + + L K G
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGE 404
+DE V E M+K P V Y+I++ GL AG +SAV + L K S++ +
Sbjct: 385 MDEVHRVY-EMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE---GPDAA 440
Query: 405 TYGILVDGLCRDGRFLEA 422
Y +++ LCR G+ EA
Sbjct: 441 AYSMVITSLCRAGKLEEA 458
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 7/351 (1%)
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
A L RS VK Q+ LL L + + + +F + +G +Y +++
Sbjct: 2 AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC N+A L+ + + + IY ++ LC ++ DA ++LEK++
Sbjct: 62 DGLCGAGMANQALELVRELSGVYTPT-----LFIYNGIITGLCRASRVMDAYKVLEKMVE 116
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+ + P + I L + A+ + E G P+ +Y + L G I
Sbjct: 117 ESI-VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +V+ E R+ ++ + L K +D+AL+ + EEM + P Y+ L
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFM-EEMRQMGVRPNEVTYSNL 234
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G G + + ++ + G Y +D LC+ G A + +EE+
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSG 294
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY++LI G+ ++ LE+M PD+ +S+L+ +C
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC 345
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFK--EAKEKYPNYRHNGPVYASMIGILSESNRITE 63
P ++T + L ++ K++ A ++ + EA PN Y S++ L +S ++ E
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV----VTYNSVMDGLCKSGKMDE 387
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ V + M C ++ + ++AG L+ AV LF+ + +++ ++
Sbjct: 388 VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVIT 447
Query: 124 EMVKESKLEAAHILFLRSCYGWEVK----SRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+ + KLE A ++ +G EV + ++L L+ LC R+D A + +
Sbjct: 448 SLCRAGKLEEACGMY----HGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVE 499
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 200/455 (43%), Gaps = 10/455 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI + + + + + ++MK + + I + + G+L++ V F+ +
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N L+ K KL + F R G +K + S + L+D C+
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIG-LEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L++A L M Q G ++V
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML----QVGVEWNVV 306
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LCD ++++A ++ K+ G+ P + + ++++ A L+NE
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGV-IPNLASYNALIHGFVKAKNMDRALELLNE 365
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P L Y L + +I V++EM+ G + ++Y + A FK G
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 425
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E L +++E M + TV + +L+ GLC + AV Y ++S G AN +
Sbjct: 426 PTEGLHLLDE-MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 484
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++DGLC+D + A+ + E+M+ + P Y L+ G G EA+ ++M
Sbjct: 485 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 544
Query: 467 QAKLPDISVWSSLVASVC-CNTADLNVCRKTLEQL 500
D+ ++SLV + CN L R LE++
Sbjct: 545 IGMKLDLLAYTSLVWGLSHCNQ--LQKARSFLEEM 577
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 38/437 (8%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
VF G L EA+ F + +F T+S N LL K K + F +
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK-RFFK 119
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G + + + N+++D +C+ + A +F+EM F+G PD +Y+ ++ G
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 179
Query: 201 RLNEATHLLYSM------------------------------FWRISQKGSG--EDIVIY 228
RL++ M F+R KG+G ++V Y
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR-EMKGNGLKPNVVSY 238
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ A C +G +Q A++ + R GL + + C G ++ A L NE L
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG-NLSDAFRLGNEML 297
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G ++ +Y+A+ L + R+ E +++ +M T G P+L Y A + K +D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
ALE++ E +G P + +Y + GLC A + + +M K+ G AN Y
Sbjct: 358 RALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTT 415
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+D + G E +L+EM V T+ VLI GLC +AV + + +
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475
Query: 469 KL-PDISVWSSLVASVC 484
L + +++++++ +C
Sbjct: 476 GLQANAAIFTAMIDGLC 492
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P +++A + L GM++EA++ + M + P R N LL G +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSK-MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ K M G TY I++D +C++G A + EEM R P TYN +I G
Sbjct: 117 FFKDMIG-AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ + V + EEM PD+ +++L+ C
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 211
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L + L K K+ AL++ E K + + + +Y + I L +I K
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGR--GIKPDLLLYGTFIWGLCSLEKIEAAK 395
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+++MK + ++ T + Y ++G E + L + + + +F L+ +
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + A F R + +++ ++D LC+ + + A +F++M +G PD
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R +Y LM G + EA L M ++ G D++ Y +L++ L ++Q A
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKM----AEIGMKLDLLAYTSLVWGLSHCNQLQKAR 571
Query: 246 QILEKILRKGL 256
LE+++ +G+
Sbjct: 572 SFLEEMIGEGI 582
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 139/313 (44%), Gaps = 11/313 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ R+ E +E+ +M + + I + +A ++ A+ L
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVL 161
L + T + + K+EAA ++ ++ C G + S I + LMD
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTT--LMDAY 420
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-G 220
+ LH+ EM ++ +L+ GLC ++ +++A F RIS G
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV----DYFNRISNDFG 476
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ I+ ++ LC +++ A + E++++KGL ++ + G +E A
Sbjct: 477 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE-A 535
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L ++ G L +Y+++ L + ++ + L+EM +G P V+ + L
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 595
Query: 341 LFKDGMVDEALEV 353
++ G +DEA+E+
Sbjct: 596 HYELGCIDEAVEL 608
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 149/399 (37%), Gaps = 75/399 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + ++ E +MKG+ + ++T + + + G + +A+ + ++
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ V ++ +L+ K L A L L+ W V + L+D LC
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV----VTYTALIDGLCD 317
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------- 209
R A +F +MD G P+ SY+ L+ G + ++ A LL
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377
Query: 210 YSMF-W----------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK-- 250
Y F W + + G + +IY TL+ A G + + +L++
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437
Query: 251 ------------ILRKGLKAPKSRRHRIDLCP----------------------CNDGED 276
+L GL K +D C D +
Sbjct: 438 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ- 496
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E A +L + + +G +P +Y+++ + +G ++E + D+M G L+ Y +
Sbjct: 497 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ L + +A +EE + +G V ++L K
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 595
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 10/328 (3%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ LC+ R+ A V + + G D +Y+ L+ G C RL+ A L+ SM
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---- 135
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
D Y ++ LCD+G++ DA+ +L+ +L++G + P + + L
Sbjct: 136 ---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQ-PSVVTYTVLLEAVCKSSG 191
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A ++++E +G P++ +Y+ + + EGR+ + ++L+ + + GF P +V Y
Sbjct: 192 FGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTT 251
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L L D+ ++V+ EMV VP +++L++ C G A+ L++MS Q
Sbjct: 252 VLKGLCAARRWDD-VKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS-Q 309
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
GC N I+++ +C+ GR +A L M + P +Y ++RGLC G+
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A L EM+ + P+ +++ + +C
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILC 397
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 184/435 (42%), Gaps = 13/435 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ + ++D M C+ + + ++ EA+++ +
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A IL S YG++ I S ++ LC R
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQ--PDIVSYTTVLKGLCAAR 260
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D +F EM + C P+ ++ +L++ C + A +L M SQ G +
Sbjct: 261 RWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM----SQHGCTPNT 316
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ ++ A+C QG++ DA L + G + C G E AK L+
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR-WEHAKELLP 375
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + + P+ +++ L +G I + K+++ M G +V Y A + G
Sbjct: 376 EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 435
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD ALE+ + P Y LL GLC A A L M Q C N T
Sbjct: 436 RVDSALELFNNLPCE----PNTITYTTLLTGLCHAERLDAAAELLAGMI-QKDCPLNAVT 490
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ +LV C+ G EA ++ +M+ P + T+N L+ G+ EA+ L ++
Sbjct: 491 FNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLV 550
Query: 466 SQAKLPDISVWSSLV 480
S+ D +SS+V
Sbjct: 551 SKGVSLDTITYSSVV 565
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 185/409 (45%), Gaps = 15/409 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ IR G++ +A++L ++ Q C ++ LL+ + K S EA ++L
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G I + N++++ +C+ R D A + + G PD SY ++KGLC R
Sbjct: 203 RAKGC--TPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAAR 260
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R ++ L F + K + V + L+ C G ++ A+Q+L+++ + G
Sbjct: 261 RWDDVKVL----FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C G ++ A +N + G P SY+ + L GR ++L
Sbjct: 317 TLCNIVINAICKQGR-VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLP 375
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM K P+ V + + L + G++++A+++IE G V V YN L+ G C
Sbjct: 376 EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV-TYNALVHGFCVQ 434
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ ++ + C N TY L+ GLC R A+ +L M+ + T
Sbjct: 435 GRVDSAL----ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVT 490
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNT 487
+NVL+ C G EA+ + +M+ P++ +++L+ + CN+
Sbjct: 491 FNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 539
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 208/476 (43%), Gaps = 15/476 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K A+ + E + K N Y +I + R+ + K
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK--GCTPNIVTYNVIINGMCREGRVDDAK 231
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+++++ + + T ++ A + ++ LF + CV +F+ L++
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291
Query: 126 VKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +E A +L S +G + + N++++ +C+ R D A M GC P
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTL--CNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY +++GLC R A LL M +K + V + T + LC +G I+ A
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEMV----RKNCPPNEVTFNTFICILCQKGLIEQA 405
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++++E + G + + C G ++ A L N P+ +Y+ +
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFCVQGR-VDSALELFNNLPCE---PNTITYTTLLT 461
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + R+ ++L M K + V + ++ + G V+EA+E++ + M G
Sbjct: 462 GLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC-T 520
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +N LL G+ NS A+ L + + G + TY +VD L R+ R EA +
Sbjct: 521 PNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYSSVVDVLSREDRTEEAIQ 579
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L + P V YN ++ LC + +A+ + M+S +P+ S + L+
Sbjct: 580 MLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 12/353 (3%)
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
+AA +L G V + + N L+ C+ R D A + M PD +Y
Sbjct: 92 DAARVLRTAEASGAPVD--VFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTP 146
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+++GLC+ R+ +A LL M Q+G +V Y LL A+C +AM +L+++
Sbjct: 147 IIRGLCDRGRVGDALALLDDML----QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
KG + I C +G ++ AK ++N G P + SY+ + L R
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGR-VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR 261
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + EM K P+ V ++ + + GMV+ A++V+++ M + P + N
Sbjct: 262 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ-MSQHGCTPNTTLCN 320
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
I++ +C G A +L M GC + +Y ++ GLCR GR+ A +L EM+
Sbjct: 321 IVINAICKQGRVDDAYDFLNNMG-MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 379
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ P T+N I LC G +A+ +E M I +++LV C
Sbjct: 380 KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 189/442 (42%), Gaps = 19/442 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ + +S+ E V+D+M+ C + I R G++++A + L
Sbjct: 178 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL 237
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLC 162
S + S+ T+LK + + + +LF + C EV + ++L+ C
Sbjct: 238 SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV-----TFDMLVRFFC 292
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ V Q+M GC P+ +I++ +C R+++A Y + G
Sbjct: 293 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA----YDFLNNMGMYGCN 348
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D + Y T+L LC G+ + A ++L +++RK + + C G IE A
Sbjct: 349 PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL-IEQAIK 407
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
LI G + +Y+A+ +GR+ D L+ P+ + Y L L
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRV---DSALELFNNLPCEPNTITYTTLLTGLC 464
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+D A E++ + K + V +N+L+ C G A+ + +M + GC N
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAV-TFNVLVSFFCQKGFVEEAMELVNQMMEH-GCTPN 522
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+DG+ +D EA +L ++ + TY+ ++ L + EA+ L
Sbjct: 523 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 582
Query: 463 EMISQAKLPDISVWSSLVASVC 484
+ P + +++ ++ ++C
Sbjct: 583 AVQDMGMRPKVGMYNKILFALC 604
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 162/380 (42%), Gaps = 48/380 (12%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I + + R+ + + ++ M C + T +R RAG+ A L + + N
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C +FNT + + ++ +E A ++ L YG V I + N L+ C R D
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG--IVTYNALVHGFCVQGRVDS 439
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL +F + C P+ +Y L+ GLC+ RL+ A LL M QK + V +
Sbjct: 440 ALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMI----QKDCPLNAVTFN 492
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ C +G +++AM+ L+N+ +
Sbjct: 493 VLVSFFCQKGFVEEAME------------------------------------LVNQMME 516
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P+L +++ + + + E ++L + +KG + Y + + L ++ +E
Sbjct: 517 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 576
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A++++ G P V +YN +L LC + A+ + M GC+ N TY IL
Sbjct: 577 AIQMLHAVQDMG-MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSN-GCMPNESTYIIL 634
Query: 410 VDGLCRDGRFLEASRVLEEM 429
++GL +G EA VL E+
Sbjct: 635 IEGLAHEGLLKEARYVLSEL 654
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+D+ A L+ + RG P + + + +L GR + +VL G + Y
Sbjct: 53 DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+A + G +D A +I V P Y +++GLCD G A+ L M
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMPVP----PDAYTYTPIIRGLCDRGRVGDALALLDDM- 167
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q GC + TY +L++ +C+ F EA VL+EM + P + TYNV+I G+C G+
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A L + S PDI +++++ +C
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLC 257
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++ + + E E+++QM C F T + + EA+ L
Sbjct: 487 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 546
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
L T ++++++ + +E + E A I L + ++ ++ N ++ LC+
Sbjct: 547 HGLVSKGVSLDTITYSSVVDVLSREDRTEEA-IQMLHAVQDMGMRPKVGMYNKILFALCK 605
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+D A+ F M GC P+ +Y IL++GL ++ L EA ++L ++ +
Sbjct: 606 RCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 15/340 (4%)
Query: 157 LMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC +R+ A+ V + M GC PD SY+ L+KGLC++ R EA LL+ M
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH-MMAD 191
Query: 216 ISQKGSGEDIVIYRTLLFALCDQG--------KIQDAMQILEKILRKGLKAPKSRRHRID 267
GS D+V Y T+L +G + AM++L +++ G+ + I
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 251
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C+ G+ E +L + + G+ P++ +YS++ L GR E K+ D M +G
Sbjct: 252 HGYCSSGQPKEAIGTL--KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + Y L K+G V E+ E + + MV+ P + YN L+ G C AG A
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIES-EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
L M VG + TYG L++G CR R +A + +EM+ P + TYN++++
Sbjct: 369 TKLLASMV-SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 427
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GL + A + ++S ++ ++ +C N
Sbjct: 428 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 467
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL--RKGLKAPKSRR 263
++ R+++ G D+ Y LL LCD+ + Q+A+++L + R G P
Sbjct: 147 MDIV---LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 264 HRIDLCPC-NDG-------EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ L +G + ++ A ++N + G +P +Y+++ + G+ E
Sbjct: 204 YNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 263
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
L +MR+ G P++V Y + + L K+G EA ++ + M K P + Y LL+
Sbjct: 264 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS-MTKRGLEPDIATYRTLLQ 322
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G C G + L + ++G + TY L+DG C G+ EA+++L M+
Sbjct: 323 GHCKEGR-VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 381
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
P + TY LI G C + + +A+ +EM+S P+I ++
Sbjct: 382 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 423
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 19/387 (4%)
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESK----LEAAHILFLRSCYGW--EVKSRIQSLN 155
+ + +++ C+ S+N LLK + E++ LE H++ G +V S LN
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 156 LLMDVLCQCRRS----DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
Q + + D A+ V M G PD +Y+ ++ G C+ + EA L
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G ++V Y +L+ LC G+ +A +I + + ++GL+ + + C
Sbjct: 270 M----RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC 325
Query: 272 NDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+G IE K + + ++R G+ P + +Y+ + G++ E K+L M + G P
Sbjct: 326 KEGRVIESEK--LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 383
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + + +D+AL + +E MV P + YNI+L+GL +A A
Sbjct: 384 IVTYGTLINGYCRVSRMDDALALFKE-MVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 442
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++K G TY I++ GLC++ EA R+ + + + T+N++I L
Sbjct: 443 VSITKS-GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWS 477
G+ EA + +PD+ +S
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYS 528
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 153/369 (41%), Gaps = 66/369 (17%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE---DIV 226
A HVF E+ +G S + L + L + R + A + S + R+++ G+G+ +
Sbjct: 39 ARHVFDELLRRG---RGASIYGLNRALADVARHSPAAAV--SRYNRMARAGAGKVTPTVH 93
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-----CNDGEDIEGAK 281
Y L+ C G++ L +++KG R I P C D +
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGF-----RVDAITFTPLLKGLCADKRTSDAMD 148
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM---RTKGFWPSLVMYEAKL 338
++ G IP + SY+ + L +E R E ++L M R G P +V Y L
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 339 AALFKDGM--------VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
FK+G+ +D+A+EV+ MVK +P YN +L G C +G A+ L
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNT-MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP------------CV 438
KKM + G N TY L++ LC++GR EA ++ + M R P C
Sbjct: 268 KKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326
Query: 439 E-----------------------TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
E TYN LI G C GK EA L M+S PDI
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386
Query: 476 WSSLVASVC 484
+ +L+ C
Sbjct: 387 YGTLINGYC 395
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 6/307 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+S++ L ++ R TE +++ D M E + + T ++ + + G++ E+ LF
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++NTL+ K++ A L L S VK I + L++ C+
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL-LASMVSVGVKPDIVTYGTLINGYCR 396
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D AL +F+EM G P+ +Y+I+++GL + RR A L S I++ G+
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS----ITKSGTQL 452
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++ Y +L LC +A+++ + + L+ ++R I + ++ AK L
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL-ETRTFNIMIGALLKCGRMDEAKDL 511
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
G +P + +YS MA +L +G + E D + M G M + + L +
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571
Query: 344 DGMVDEA 350
G + A
Sbjct: 572 RGDITRA 578
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P++ +Y+ + GR+ G L + KGF + + L L D +A+++
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVD 411
+ M + +P V YN LLKGLCD S A+ L M+ G + + +Y +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 412 GLCRDG--------RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
G ++G +A VL M+ P TYN ++ G CS G+ EA+ L++
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M S P++ +SSL+ +C N
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKN 292
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 186/397 (46%), Gaps = 20/397 (5%)
Query: 10 TPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
TP ++ ++K+ P AL+ F + Y H+ + I I + + + +
Sbjct: 55 TPNLVNSVLKRLWNHGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I +M+ FA YA AG+ ++AV LF N+ + C SFNT+L + K
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++E A+ LF R+ G + N++++ C +R+ AL V +EM +G P+
Sbjct: 174 SKRVEKAYELF-RALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ ++KG ++ A + F + ++ D+V Y T++ G+I+ A +
Sbjct: 232 TYNTMLKGFFRAGQIRHA----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++R+G+ + + + C +++E A + E + RG P++ +Y+ + L+
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKK-DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ G G++++ M +G P+ Y + + V++AL + E+M G +P +
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF-EKMGSGDCLPNL 405
Query: 368 RVYNILLKG---------LCDAGNSAVAVMYLKKMSK 395
YNIL+ G + AGN A A L+ SK
Sbjct: 406 DTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSK 442
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 52/348 (14%)
Query: 145 WEVKSRIQSLNL---------LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
W + R++SL + + + + D A+ +F M GC+ D S++ ++
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC +R+ +A L ++ R S D V Y +L C + A+++L++++ +G
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSV-----DTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P+L +Y+ M + G+I
Sbjct: 226 IN------------------------------------PNLTTYNTMLKGFFRAGQIRHA 249
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM+ + +V Y + G + A V +E M++ +P+V YN +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE-MIREGVLPSVATYNAMIQ 308
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC N AV+ ++M ++ G N TY +L+ GL G F +++ M
Sbjct: 309 VLCKKDNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P +TYN++IR + +A+ E+M S LP++ ++ L++ +
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +++ +A + G+ + K+ M G + L + L L K V++A E+
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++G F YN++L G C + A+ LK+M ++ G N TY ++ G
Sbjct: 184 FRA--LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-GINPNLTTYNTMLKGF 240
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G+ A EM R V TY ++ G G+ A +EMI + LP +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 474 SVWSSLVASVC 484
+ +++++ +C
Sbjct: 301 ATYNAMIQVLC 311
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 193/428 (45%), Gaps = 57/428 (13%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT---------AIRTY 90
++RH+ Y M+ L+ ++R ++ ++ M + C C D +F+ A+ +
Sbjct: 95 SFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPCSDGIFSCPRSEPIFRFALNAF 154
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQS---FNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
R G+L +A F ++ + ++ S N L+ VK + E ++ + V
Sbjct: 155 CRVGRLEDAEIAFASMRRM--IDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKD-RV 211
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K + + N L+ C+ + LAL +F+EM +GC P+ S++ L+KG +R+ E
Sbjct: 212 KPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVG 271
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+ Y M + G V L+ LC +G++ +A +L
Sbjct: 272 MAYEML----ELGCEFSNVTCEILVDGLCREGRVLEAFDLLI------------------ 309
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
D G +G +P+ Y + L E + ++LD++ KG
Sbjct: 310 --------DFSG----------KGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGN 351
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
PS + + L + G +EA +++E+ M++ +P N LL+ LC+ G S A
Sbjct: 352 APSSIACTTLIEGLRRFGKTEEAFQLMEK-MLREGILPDSVTCNCLLQDLCEVGRSFEA- 409
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L+ ++ G ++G T+ ILV+G R+G+ E R+L+EML + P + +YN L+ G
Sbjct: 410 NKLRLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLDEMLDLGFIPDLASYNRLMNG 469
Query: 448 LCSIGKQY 455
L + G +
Sbjct: 470 LSNGGSSH 477
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 16/328 (4%)
Query: 167 SDLALHVFQ-EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG--- 222
S LH+F D +Y ++K L R ++ LL M G
Sbjct: 80 SHFDLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPCSDGIFS 139
Query: 223 --EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDI 277
I+R L A C G+++DA + R P H I C + E +
Sbjct: 140 CPRSEPIFRFALNAFCRVGRLEDAEIAFASMRRMIDGKPSVAMHNILINGYVKCREHEKV 199
Query: 278 EGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ E +I+ + P + +++++ + ++ EM+ KG P++V +
Sbjct: 200 ----MTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNT 255
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ F++ +E + + E + G V IL+ GLC G A L S +
Sbjct: 256 LIKGSFRERKFEEGVGMAYEMLELGCEFSNVTC-EILVDGLCREGRVLEAFDLLIDFSGK 314
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G + NG Y L++ LC + A +L+++ + P LI GL GK E
Sbjct: 315 -GALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTTLIEGLRRFGKTEE 373
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A +E+M+ + LPD + L+ +C
Sbjct: 374 AFQLMEKMLREGILPDSVTCNCLLQDLC 401
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 6/269 (2%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
+ + C RL +A SM I K S + ++ L+ + + M +
Sbjct: 147 FRFALNAFCRVGRLEDAEIAFASMRRMIDGKPS---VAMHNILINGYVKCREHEKVMTVY 203
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
EK+++ +K P + C A + E +G P++ S++ + +
Sbjct: 204 EKMIKDRVK-PDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFR 262
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
E + EG + EM G S V E + L ++G V EA +++ + KG +P
Sbjct: 263 ERKFEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGA-LPNGF 321
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
Y L++ LC N A+ L ++ ++ G + L++GL R G+ EA +++E+
Sbjct: 322 DYFCLIEALCGEENVDRALELLDQLWRK-GNAPSSIACTTLIEGLRRFGKTEEAFQLMEK 380
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
ML P T N L++ LC +G+ +EA
Sbjct: 381 MLREGILPDSVTCNCLLQDLCEVGRSFEA 409
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 201/447 (44%), Gaps = 38/447 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + + + +E++++M ++C + FAT IR++ + G L+ AV L + +
Sbjct: 212 TYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM 271
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ C ++TL+ ++ +++ A +L K N + LC R
Sbjct: 272 PRYGCTPDVVIYSTLVNGFSEQGRVDDALVLL----NTMLCKPNTVCYNAALKGLCMAER 327
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ EM + C P+ ++ +L LC ++ A ++ M + G D+V
Sbjct: 328 WKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM----QKYGCRPDVV 383
Query: 227 IYRTLLFALCDQGKIQDAMQILEKIL--------RKGLKAPKSRRHRIDLCPCNDGEDIE 278
IY TL+ +QG++ DA+ +L+ +L LKA LC D+E
Sbjct: 384 IYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKA---------LCRTERWYDVE 434
Query: 279 GAKSLINEALIRGGIPSLASYSAMAID-LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
LI + ++R P + + ID L G + +V ++M P +V Y +
Sbjct: 435 ---ELIAQ-MLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSL 490
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G+V+ A+E+ + K P + YN +LKGLC A A + M+++
Sbjct: 491 INGFSEQGLVESAIELFQSMPCK----PDIFSYNAVLKGLCRAARWEDAGELIANMARK- 545
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C N T+ IL++ LC+ G A V ++M P + TYN LI G G+ +A
Sbjct: 546 DCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDA 605
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ L M + PD ++S + +C
Sbjct: 606 LNLLSTMSCK---PDAISYNSTLKGLC 629
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL+K LC RRL +A +L ++ + GS D V + TL+ C G++ DA ++LE
Sbjct: 114 NILIKKLCAHRRLADAERVLDAL----KESGSA-DAVSHNTLVAGYCRDGRLADAERVLE 168
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
G + I+ C G + A +LI + P +Y+ + L
Sbjct: 169 AAKVSGAANVVTYTALINGY-CRSGR-LADALNLIASMPV---APDTYTYNTVLKGLCGA 223
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
+ + +++++EM P+ V + ++ + ++G++D A++++ E M + P V +
Sbjct: 224 KQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLL-ERMPRYGCTPDVVI 282
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+ L+ G + G A++ L M C N Y + GLC R+ + ++ EM
Sbjct: 283 YSTLVNGFSEQGRVDDALVLLNTML----CKPNTVCYNAALKGLCMAERWKDVGELIAEM 338
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + P T+++L LC G A+ +E+M PD+ ++++L+
Sbjct: 339 VRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLI 389
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + + EV +QM C +++ I ++ G + A+ LF+++
Sbjct: 455 LIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP--- 511
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C S+N +LK + + ++ E A L + C E+ + N+L++ LCQ
Sbjct: 512 CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEI-----TFNILINSLCQKGF 566
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+D A+ VF++M G PD +Y+ L+ G RL++A +LL +M + D +
Sbjct: 567 ADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK-------PDAI 619
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRK 254
Y + L LC + ++A +I+ ++LRK
Sbjct: 620 SYNSTLKGLCRAERWKEAEEIVAEMLRK 647
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAID-----LYNEGRIVEGDKVLDEMRTKGFWP 329
ED++ A L+ G +PS + +A + L R+ + ++VLD ++ G
Sbjct: 90 EDLDAALRLV------GSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESGSAD 143
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ V + +A +DG + +A V+E V G V Y L+ G C +G A A+
Sbjct: 144 A-VSHNTLVAGYCRDGRLADAERVLEAAKVSG--AANVVTYTALINGYCRSGRLADALNL 200
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+ M + TY ++ GLC ++ +A ++EEM+ + P T+ IR C
Sbjct: 201 IASMP----VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFC 256
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
G AV LE M PD+ ++S+LV
Sbjct: 257 QNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N L+ G C G A A L+ + +V AN TY L++G CR GR +A ++ M
Sbjct: 147 HNTLVAGYCRDGRLADAERVLE--AAKVSGAANVVTYTALINGYCRSGRLADALNLIASM 204
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ P TYN +++GLC + +A +EEMI P+ +++ + S C N
Sbjct: 205 PVA---PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQN 258
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 191/406 (47%), Gaps = 19/406 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSF-NTLLKEMVKESKLEAAHILFLRSCYG 144
+RT A G L A+S F++L +F SF N L + +KES+++ I +
Sbjct: 88 VRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCV-IWLYKDMAV 146
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+VK + + NLL+ LC+ + A VF +M +GC P+ S IL++G C +
Sbjct: 147 AKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSH 206
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
LL M G+ + V Y T++ +LC +G+ +A +++EK+ GL +
Sbjct: 207 GIDLLDEM----RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262
Query: 265 RIDLCPCNDGEDIEGAKSL----INEALIRGGIP--SLASYSAMAIDLYNEGRIVEGDKV 318
C G+ +E ++ I+E + G+P + +Y+ M +EG E +
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEM---GLPKPNTVTYNLMLEGFCSEGMFEEARAI 319
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D M+ SL Y + L + G + EA +I EM + P + YNIL+ GLC
Sbjct: 320 FDSMKNSETL-SLRSYNIWMLGLVRSGKLLEA-HLILNEMAEKNIKPNLYSYNILVHGLC 377
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G + A L M ++ G + TY L+ G CR G+ LEA+ VL EM+ +P +
Sbjct: 378 KYGMFSDARSILGLM-RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T N+L+ L G+ EA L+ M + D ++++ +C
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 200/460 (43%), Gaps = 52/460 (11%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
N I++ + + D+ D S + R + +++ + L+K+++ T +F
Sbjct: 99 NAISQFRSLRDRFPHDPPPI--SFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTF 156
Query: 119 NTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
N L+ + + LE A +F + C E SL +L+ C+ + +
Sbjct: 157 NLLISALCEMGYLENAREVFDKMSEKGCKPNEF-----SLGILVRGYCRAGLHSHGIDLL 211
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
EM G P+R +Y+ ++ LC + + EA L+ M + G DIV + + A
Sbjct: 212 DEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM----REVGLSPDIVTFNCRIAA 267
Query: 235 LCDQGKIQDA------MQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEA 287
LC G+I +A MQI E++ GL P + + + L C++G E A+++ ++
Sbjct: 268 LCKSGQILEASRIFRDMQIDEEM---GLPKPNTVTYNLMLEGFCSEGM-FEEARAIF-DS 322
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ SL SY+ + L G+++E +L+EM K P+L Y + L K GM
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMF 382
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A ++ M + P Y+ LL G C G A L++M QVGC N T
Sbjct: 383 SDARSIL-GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMI-QVGCFPNMYTCN 440
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV-----MWLE 462
IL+ L ++GR EA +L+ M R Y T N +I GLC G +A+ MW
Sbjct: 441 ILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTR 500
Query: 463 EMISQAK------------------LPDISVWSSLVASVC 484
S LPD +++++ +C
Sbjct: 501 GSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 58/477 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L + E ++++++M+ F I ++GQ+ EA +F
Sbjct: 222 NRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIF 281
Query: 104 KNLSQFNCVNW----TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++ + T ++N +L+ E E A +F S E S ++S N+ M
Sbjct: 282 RDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLS-LRSYNIWML 339
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + + A + EM + P+ SY+IL+ GLC ++A +L M +
Sbjct: 340 GLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM----RES 395
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------------ 255
G D V Y TLL C +GKI +A +L ++++ G
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455
Query: 256 ---LKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
L+ R + +D CN +++ A +++ RG SL + ID
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS-ASLGNLGNSFID 514
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L++ G K L P + Y + L K G VDEA + + E M+ P
Sbjct: 515 LFDIRN--NGKKCL---------PDSITYATIIGGLCKVGRVDEAKKKLLE-MIGKKLSP 562
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+++ + C G + A LK+M K+ GC + TY L+ GL + + E +
Sbjct: 563 DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK-GCNKSLRTYNSLIQGLGSENQIFEIYGL 621
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++EM R +P V TYN +I L GK +A L+EM+ + P+I + L+ +
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGA 678
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 192/462 (41%), Gaps = 40/462 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L E + +EV D+M C+ + +R Y RAG + + L +
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ ++NT++ + E + A L + + I + N + LC+ + A
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKL-VEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 171 LHVFQEMDFQG----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+F++M P+ +Y+++++G C++ EA + SM + +
Sbjct: 278 SRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-----KNSETLSLR 332
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSL 283
Y + L GK+ +A IL ++ K +K P + I LC D L
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIK-PNLYSYNILVHGLCKYGMFSDARSILGL 391
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ E+ G P +YS + G+I+E + VL EM G +P++ L +L+K
Sbjct: 392 MRES---GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVG- 398
+G EA ++++ +G + V N ++ GLC AGN A+ + M S +G
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTC-NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 399 -----------------CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
C+ + TY ++ GLC+ GR EA + L EM+ + P +
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ I C GK A L+EM + + ++SL+ +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL 609
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 206/475 (43%), Gaps = 38/475 (8%)
Query: 25 LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L A I E EK N + N Y ++ L + ++ + ++ M+ ++
Sbjct: 348 LEAHLILNEMAEK--NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYS 405
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCY 143
T + Y R G++ EA + + + Q C + N LL + KE + EA +L + +
Sbjct: 406 TLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNER 465
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG---------------------- 181
G+ + + + N +++ LC+ D A+ + M +G
Sbjct: 466 GYGLDN--VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
Query: 182 -CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD +Y ++ GLC R++EA L M I +K S D +I+ T ++ C QGK
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEM---IGKKLS-PDSLIFDTFIYNYCKQGK 579
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED-IEGAKSLINEALIRGGIPSLASY 299
+ A ++L+++ +KG KS R L E+ I L++E RG P++ +Y
Sbjct: 580 LSSAFRVLKEMEKKGCN--KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTY 637
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L G++ + +LDEM KG P++ + + A FK A E+ E +
Sbjct: 638 NNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALS 697
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ +Y+ + L AG + L + + Y L++ LC+DG+
Sbjct: 698 LCGHKES--LYSFMFNELL-AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+AS +L +M+ + Y ++ +I L G ++ A + E M+ A D +
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFN 809
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 212/506 (41%), Gaps = 71/506 (14%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATA 86
++ F+ A +K NY H+ Y ++I L + EM ++I +M + C +
Sbjct: 103 MQFFRWAAKKR-NYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDI 161
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR A +++AV++F + C Q++N+++ ++ E + E H L+
Sbjct: 162 IRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGH 221
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLA-----------------------------------L 171
+ + L+ C+ R D A L
Sbjct: 222 CFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGAL 281
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+F+EM Q C PD +Y L++GL R +EA Y+ F + ++G D V+ +
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEA----YNFFHEMRREGCRPDTVVINNM 337
Query: 232 LFALCDQGKIQDAMQILEKI--------------LRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ L G++ DA+++ E++ + K L KSR I + E +
Sbjct: 338 INFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEIS----SWFERM 393
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+G+ G PS +YS + R + +L+EM KGF P Y +
Sbjct: 394 KGS----------GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSL 443
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ AL K D A E+ +E + + + RVY +++K L AG AV +M+K +
Sbjct: 444 IDALGKAKRYDIAHELFQE-LKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNK-L 501
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
GC N Y L+ GL R G EA + M P + +YN+++ GL G + A
Sbjct: 502 GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 561
Query: 458 VMWLEEMISQAKLPDISVWSSLVASV 483
+ L M A PD +++++ ++
Sbjct: 562 MEMLSNMKQSAIKPDAVSYNTVLGAM 587
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 150/336 (44%), Gaps = 9/336 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F+E + +Y R + Y +I L ++ R E +M+ + C V
Sbjct: 280 ALGLFEEMRHQY--CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNM 337
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI-LFLRSCYGW 145
I +AG+L++AV LF+ + C+ ++NT++K + ESK + I + G
Sbjct: 338 INFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALF-ESKSRISEISSWFERMKGS 396
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + ++L+D C+ R++ A+ + +EMD +G P +Y L+ L +R + A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ +F + + +Y ++ L G++ DA+ + +++ + G P +
Sbjct: 457 ----HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGC-TPNVYAYN 511
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ ++ A + + G IP + SY+ + L G ++L M+
Sbjct: 512 ALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 571
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
P V Y L A+ G+ +EA ++++E V G
Sbjct: 572 AIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 195/422 (46%), Gaps = 38/422 (9%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HILFLRS 141
I Y GQ+ A S+F + + T + TL+K K++ A H+L L
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL-- 170
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+ S L++ LC+ + AL + ++++ + D Y ++ GLC D+
Sbjct: 171 --GFHFNQ--VSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKL 226
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+N+A Y ++ + K +V +L++ C G+ ++A +L +++ K +
Sbjct: 227 VNDA----YELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVY 282
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA-----IDLYNEGR----- 311
+ + C +G+ I+ AKS I + G +P + +YS++ ++ N+ +
Sbjct: 283 TFNILVDALCKEGK-IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSI 341
Query: 312 IVEG-------DKVLD---EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
++ G DK L EMR + P V Y + + L K G + A E+++E G
Sbjct: 342 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 401
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+ YN L+ LC + A+ +KK+ Q G + TY IL+DGLC+ GR +
Sbjct: 402 QPADII-TYNSLIDALCKNHHVDKAIALVKKIKDQ-GIQLDMYTYNILIDGLCKQGRLKD 459
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A + +++LI+ Y V TY ++I GLC G EA L +M +PD +++
Sbjct: 460 AQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIR 519
Query: 482 SV 483
++
Sbjct: 520 AL 521
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+++ VS F + N F +L +VK LF + + +K I SL
Sbjct: 51 HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNG-IKPNIVSL 109
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
++L++ C + A +F ++ G +P+ + L+KG C + ++ EA H
Sbjct: 110 SILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHF----HD 165
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G + V Y TL+ LC G+ + A+Q+L +I K + I C D
Sbjct: 166 HVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKD- 224
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ + A L +E + + P++ + +++ G+ E +L EM K P + +
Sbjct: 225 KLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTF 284
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+G + EA I M +G +P V Y+ L+ G C A
Sbjct: 285 NILVDALCKEGKIKEAKSGIAVMMKEGV-MPDVVTYSSLMDGYCLVNEVNKA-------- 335
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Y I+++G C+ +A + EM R P TYN LI GLC G+
Sbjct: 336 --------KHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 387
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A ++EM + DI ++SL+ ++C N
Sbjct: 388 SYAWELVDEMRDSGQPADIITYNSLIDALCKN 419
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
V++ I + + +++A+SLF + T ++N+L+ + K ++
Sbjct: 338 VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS--------- 388
Query: 142 CYGWEV---------KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
Y WE+ + I + N L+D LC+ D A+ + +++ QG D +Y+IL
Sbjct: 389 -YAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL 447
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ GLC RL +A +F + KG + Y ++ LC +G + +A +L K+
Sbjct: 448 IDGLCKQGRLKDAQ----VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKME 503
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
G P + + + + E A+ L+ E + RG
Sbjct: 504 DNGC-VPDAVTCETIIRALFENDKNERAEKLLREMIARG 541
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 14/345 (4%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+P+ + ++I Q PL A +IF A + PN++H+ + +I L + + + M++++
Sbjct: 58 SPSRVQKLIASQSDPLLAKEIFDLASLQ-PNFKHSYSSFHILILKLGWARQFSLMQDLLM 116
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
++K + S+F+ I Y A ++A+ F ++ QF+ + N LL+ +V
Sbjct: 117 RLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSHR 176
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+S + + V +S N+LM C +A +F +M + PD ESY
Sbjct: 177 NYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESY 236
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
ILM+GLC ++N A LL M KG D + Y T F LCDQG +A +E
Sbjct: 237 RILMQGLCRKSQVNRAVDLLEDML----NKGYVPDALSYTT--FGLCDQGLYDEAKNYVE 290
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L KG S H + CN G+ +E A ++ E L G P ++ A+ +
Sbjct: 291 EMLSKGFSLHFSVFHALINGFCNVGK-LEEACEVLREMLRHGEAPHTETWVAIIPRICEV 349
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++V + + DE P+ + EA + G+ + LE+I
Sbjct: 350 DKLVRMENIFDEALKLEITPNTRLVEAGI------GLEERGLELI 388
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P Y ++A +G + A + + M K P V Y IL++GLC
Sbjct: 193 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQ-MFKRDVAPDVESYRILMQGLCRKSQVNR 251
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
AV L+ M + G V + +Y GLC G + EA +EEML + + ++ LI
Sbjct: 252 AVDLLEDMLNK-GYVPDALSYTTF--GLCDQGLYDEAKNYVEEMLSKGFSLHFSVFHALI 308
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C++GK EA L EM+ + P W +++ +C
Sbjct: 309 NGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRIC 347
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 11/276 (3%)
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+F+ Y S+HIL+ L R+ + L+ + R+ + + ++ ++ +
Sbjct: 87 NFKHSY---SSFHILILKLGWARQFS----LMQDLLMRLKSEQYSINPSLFSDIIEIYGE 139
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
A++ +L+ K +R+ + I A L A G P
Sbjct: 140 ANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTK 199
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SY+ + G + + ++M + P + Y + L + V+ A++++E+
Sbjct: 200 SYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDM 259
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ KG +VP Y GLCD G A Y+++M + G + + L++G C G
Sbjct: 260 LNKG-YVPDALSYTTF--GLCDQGLYDEAKNYVEEMLSK-GFSLHFSVFHALINGFCNVG 315
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ EA VL EML P ET+ +I +C + K
Sbjct: 316 KLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDK 351
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ D+AL+ M++ P + N LL+ L N L K + + G + +
Sbjct: 141 NLPDQALKTFHS-MLQFHSKPLPKHLNRLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTK 199
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
+Y IL+ C +G A + +M R P VE+Y +L++GLC + AV LE+M
Sbjct: 200 SYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDM 259
Query: 465 ISQAKLPDISVWSSL 479
+++ +PD +++
Sbjct: 260 LNKGYVPDALSYTTF 274
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 190/406 (46%), Gaps = 19/406 (4%)
Query: 87 IRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSF-NTLLKEMVKESKLEAAHILFLRSCYG 144
+RT A G L A+S F++L +F SF N L + +KES+++ I +
Sbjct: 88 VRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCV-IWLYKDMAV 146
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
VK + + NLL+ LC+ + A VF +M +GC P+ S IL++G C +
Sbjct: 147 ARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSH 206
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
LL M G+ + V Y T++ +LC +G+ +A +++EK+ GL +
Sbjct: 207 GIDLLDEM----RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262
Query: 265 RIDLCPCNDGEDIEGAKSL----INEALIRGGIP--SLASYSAMAIDLYNEGRIVEGDKV 318
C G+ +E ++ I+E + G+P + +Y+ M +EG E +
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEM---GLPKPNTVTYNLMLEGFCSEGMFEEARAI 319
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D M+ SL Y + L + G + EA +I EM + P + YNIL+ GLC
Sbjct: 320 FDSMKNSETL-SLRSYNIWMLGLVRSGKLLEA-HLILNEMAEKNIKPNLYSYNILVHGLC 377
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G + A L M ++ G + TY L+ G CR G+ LEA+ VL EM+ +P +
Sbjct: 378 KYGMFSDARSILGLM-RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T N+L+ L G+ EA L+ M + D ++++ +C
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 200/460 (43%), Gaps = 52/460 (11%)
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF 118
N I++ + + D+ D S + R + +++ + L+K+++ T +F
Sbjct: 99 NAISQFRSLRDRFPHDPPPI--SFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTF 156
Query: 119 NTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
N L+ + + LE A +F + C E SL +L+ C+ + +
Sbjct: 157 NLLISALCEMGYLENAREVFDKMSEKGCKPNEF-----SLGILVRGYCRAGLHSHGIDLL 211
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
EM G P+R +Y+ ++ LC + + EA L+ M + G DIV + + A
Sbjct: 212 DEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM----REVGLSPDIVTFNCRIAA 267
Query: 235 LCDQGKIQDA------MQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEA 287
LC G+I +A MQI E++ GL P + + + L C++G E A+++ ++
Sbjct: 268 LCKSGQILEASRIFRDMQIDEEM---GLPKPNTVTYNLMLEGFCSEGM-FEEARAIF-DS 322
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ SL SY+ + L G+++E +L+EM K P+L Y + L K GM
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMF 382
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A ++ M + P Y+ LL G C G A L++M QVGC N T
Sbjct: 383 SDARSIL-GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMI-QVGCFPNMYTCN 440
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV-----MWLE 462
IL+ L ++GR EA +L+ M R Y T N +I GLC G +A+ MW
Sbjct: 441 ILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTR 500
Query: 463 EMISQAK------------------LPDISVWSSLVASVC 484
S LPD +++++ +C
Sbjct: 501 GSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 58/477 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L + E ++++++M+ F I ++GQ+ EA +F
Sbjct: 222 NRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIF 281
Query: 104 KNLSQFNCVNW----TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++ + T ++N +L+ E E A +F S E S ++S N+ M
Sbjct: 282 RDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLS-LRSYNIWML 339
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + + A + EM + P+ SY+IL+ GLC ++A +L M +
Sbjct: 340 GLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM----RES 395
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------------ 255
G D V Y TLL C +GKI +A +L ++++ G
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455
Query: 256 ---LKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
L+ R + +D CN +++ A +++ RG SL + ID
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS-ASLGNLGNSFID 514
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L++ G K L P + Y + L K G VDEA + + E M+ P
Sbjct: 515 LFDIRN--NGKKCL---------PDSITYATIIGGLCKVGRVDEAKKKLLE-MIGKKLSP 562
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+++ + C G + A LK+M K+ GC + TY L+ GL + + E +
Sbjct: 563 DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK-GCNKSLRTYNSLIQGLGSENQIFEIYGL 621
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
++EM R +P V TYN +I L GK +A L+EM+ + P+I + L+ +
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGA 678
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 192/462 (41%), Gaps = 40/462 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L E + +EV D+M C+ + +R Y RAG + + L +
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+ ++NT++ + E + A L + + I + N + LC+ + A
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKL-VEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 171 LHVFQEMDFQG----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+F++M P+ +Y+++++G C++ EA + SM + +
Sbjct: 278 SRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-----KNSETLSLR 332
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSL 283
Y + L GK+ +A IL ++ K +K P + I LC D L
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIK-PNLYSYNILVHGLCKYGMFSDARSILGL 391
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ E+ G P +YS + G+I+E + VL EM G +P++ L +L+K
Sbjct: 392 MRES---GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVG- 398
+G EA ++++ +G + V N ++ GLC AGN A+ + M S +G
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTC-NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 399 -----------------CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
C+ + TY ++ GLC+ GR EA + L EM+ + P +
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ I C GK A L+EM + + ++SL+ +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL 609
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 206/475 (43%), Gaps = 38/475 (8%)
Query: 25 LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L A I E EK N + N Y ++ L + ++ + ++ M+ ++
Sbjct: 348 LEAHLILNEMAEK--NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYS 405
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCY 143
T + Y R G++ EA + + + Q C + N LL + KE + EA +L + +
Sbjct: 406 TLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNER 465
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG---------------------- 181
G+ + + + N +++ LC+ D A+ + M +G
Sbjct: 466 GYGLDN--VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
Query: 182 -CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
C PD +Y ++ GLC R++EA L M I +K S D +I+ T ++ C QGK
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEM---IGKKLS-PDSLIFDTFIYNYCKQGK 579
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED-IEGAKSLINEALIRGGIPSLASY 299
+ A ++L+++ +KG KS R L E+ I L++E RG P++ +Y
Sbjct: 580 LSSAFRVLKEMEKKGCN--KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTY 637
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L G++ + +LDEM KG P++ + + A FK A E+ E +
Sbjct: 638 NNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALS 697
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ +Y+ + L AG + L + + Y L++ LC+DG+
Sbjct: 698 LCGHKES--LYSFMFNELL-AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+AS +L +M+ + Y ++ +I L G ++ A + E M+ A D +
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFN 809
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 157/333 (47%), Gaps = 45/333 (13%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ N L+ LC+ R+ A + +EM + GC PD +Y L+ G C ++ ++A +
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV---- 111
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F ++ +G D+V Y L+ LC +G++++A+ + ++++ G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG----------------- 154
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+P+ +Y+++ G++ E +L+ M G P +V
Sbjct: 155 ------------------SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 196
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K +D+A +++ + KG P V + L+ GLC + AV L +
Sbjct: 197 TYTTLMNGFCKLARLDDAYDLLNQMTRKG-LTPNVVTFTSLMDGLCRENRLSDAVHILGE 255
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASR-VLEEMLIRSYWPCVETYNVLIRGLCSI 451
M ++ C TY ++DG CR + EA + +LEEM P V ++N++IRGLC +
Sbjct: 256 MRRK-SCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKV 311
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA+ +EE + PD+ ++++++ +C
Sbjct: 312 NRSSEAMELVEEARRRRCNPDVVMYTTVIDVLC 344
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 45/329 (13%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++N+L+ + K + A+ L Y + I + L+ C+ ++SD AL VF++
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPD-IFTYTTLITGFCKSKKSDDALRVFEQ 114
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG-EDIVIYRTLLFAL 235
+ +G PD +Y L+ GLC + RL EA L F R+ + GS + V Y +L+
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGSCMPNTVTYNSLISGF 170
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C GK+ +AM +LE++ G +P + + ++ A L+N+ +G P+
Sbjct: 171 CRMGKMDEAMNLLERMAETG-SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +++++ L E R+ + +L EMR K P++ Y L + ++EA + +
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML 289
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVA----------------VMYL--------- 390
EEM P V +NI+++GLC S+ A VMY
Sbjct: 290 EEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCRE 346
Query: 391 ----------KKMSKQVGCVANGETYGIL 409
+KM ++ GC+ N TY
Sbjct: 347 KKVDEACRVYRKMLEEPGCLPNSITYSTF 375
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+P+ +Y+++ L R E +L+EM G P + Y + K D+AL
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V E+ + +G F P V Y+ L+ GLC G A+ +M K C+ N TY L+ G
Sbjct: 111 VFEQLVARG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 169
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
CR G+ EA +LE M P V TY L+ G C + + +A L +M + P+
Sbjct: 170 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 473 ISVWSSLVASVC 484
+ ++SL+ +C
Sbjct: 230 VVTFTSLMDGLC 241
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 7/327 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I L ++ R +E +++++M C + T I + ++ + ++A+ +F+ L
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+++ L+ + KE +L+ A LF R + N L+ C+ +
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+++ + M G PD +Y LM G C RL++A LL M ++KG ++V
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM----TRKGLTPNVV 231
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ LC + ++ DA+ IL ++ RK + I C + E K ++ E
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P++ S++ M L R E ++++E R + P +VMY + L ++
Sbjct: 292 M---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNIL 373
VDEA V + + + +P Y+
Sbjct: 349 VDEACRVYRKMLEEPGCLPNSITYSTF 375
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 201/472 (42%), Gaps = 81/472 (17%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++P+ + + +KK + AL F+ A EK ++++ Y ++I L + + + +
Sbjct: 3 VSPSLVFEALKKLSNAGALALSFFRWA-EKQKGFQYSTESYHALIESLGKIKQFNVIWNL 61
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ MK K++ FA R YARA ++ EAV F + +F
Sbjct: 62 VTDMKQKGLLNKET-FALISRRYARARKVKEAVDAFMKMEKFGL---------------- 104
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
K+E++ + N L+D LC+ R+ + A VF +M+ +G D +
Sbjct: 105 --KIESSDV------------------NRLLDTLCKSRQVERAQLVFDKMNKRGFVADIK 144
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
SY IL++G ++ L+ L ++ + +G D+V Y L+ A C + DA+++
Sbjct: 145 SYTILLEGWGQEKNLSR----LMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIEL 200
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++ K K PS Y + L
Sbjct: 201 FHEMEAKNCK------------------------------------PSPHIYCTLINGLG 224
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
E R+ E + + + GF P Y A + A +D+ I+E M KG P+
Sbjct: 225 AEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDE-MRKGGVGPSA 283
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
R Y+I+L L AG + +A +KMS + GC + TY I+V C + R A +V +
Sbjct: 284 RTYDIILHHLIRAGKTKIAYSVFQKMSCE-GCQPSVSTYEIIVRMFCNEDRVDMAIKVWD 342
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+M + P + ++ LI LC K EA M+ +EM+ P ++S+L
Sbjct: 343 QMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNL 394
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 54/357 (15%)
Query: 169 LALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
LAL F+ + Q G ESYH L++ L ++ N +++++ + QKG +
Sbjct: 21 LALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFN----VIWNLVTDMKQKG------L 70
Query: 228 YRTLLFALCDQG-----KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
FAL + K+++A+ K+ + GLK S +R+ C + +E A+
Sbjct: 71 LNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQ-VERAQL 129
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ ++ RG + + SY+ + E + +V +EM+ +GF P +V Y + A
Sbjct: 130 VFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHC 189
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K D+A+E+ E K P+ +Y L+ GL + A+ + + +SK G V
Sbjct: 190 KSRRYDDAIELFHEMEAKNC-KPSPHIYCTLINGLGAEKRLSEALEFFE-LSKASGFVPE 247
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEM------------------LIRSY---------- 434
TY +V C R + R ++EM LIR+
Sbjct: 248 APTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQ 307
Query: 435 -------WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY +++R C+ + A+ ++M ++ LP + ++S+L+ S+C
Sbjct: 308 KMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLC 364
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 205/445 (46%), Gaps = 25/445 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y + I L ++ ++ + E++++M F + I +A ++++A +FK +
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA-----HILFLRSCYGWEVKSRIQSLNLLMDVL 161
+ CV + +++ +L + + ++L+ H+ +++ EV + N + L
Sbjct: 249 LERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH----NAFIGAL 304
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-- 219
C+ + LA ++ M G P+ SY+ ++ GLC +++A W++S+K
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA--------WKLSRKML 356
Query: 220 GSG---EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
SG D++ + TL+ C G++ A Q+L ++ K + P + + +
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
++ AK L+ E G P++ +Y+A+ G E + + DEM KG +P ++ Y
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
L+A K GM+ +A V ++ K ++ P Y IL+ G C A ++ + L++M+
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536
Query: 396 QVGCVANGETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ G + TY +L+ L +A V ++ML + P +N L+R G
Sbjct: 537 R-GWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595
Query: 455 YEAVMWLEEMISQAKLPDISVWSSL 479
A ++EM + L D S +L
Sbjct: 596 NSARSMVQEMNEKGHLVDASNLEAL 620
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 189/473 (39%), Gaps = 76/473 (16%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I ++G L+ A +L + ++ C ++ L+ + K + A I ++
Sbjct: 12 TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA-IQTVKR 70
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + N L+ LC R D A V QE+ G P+ +Y L+ C RR
Sbjct: 71 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRR 130
Query: 202 LNEATHLLYSMFWRIS---------------------------------QKGSGEDIVIY 228
L++A L+ M R S + G D+V Y
Sbjct: 131 LDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTY 190
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINE 286
T + LC GK+ +++LE++ R G+ I LC N I+ A +
Sbjct: 191 NTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR---IDDAFQVFKG 247
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT---------------------- 324
L RG +P +YS M +L R+ D+VL+ M+
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307
Query: 325 ---------------KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G P+L+ Y + L K G VD+A ++ + + G P V
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N L+ G C AG + A L +M + CV + TY L+DG + G +A +L+EM
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
P V TY LI G G EA +EM ++ PDI +++++++
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSA 480
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 67/386 (17%)
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ + + L+D LC+ D A + Q+M GC P+ +Y L+ GLC RR ++A
Sbjct: 8 ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS------- 261
+ M + G D+V Y +L+ LC ++ DA +L++++R G AP
Sbjct: 68 VKRML----RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGF-APNHITYSTLV 122
Query: 262 ----RRHRIDLCPCNDGEDIEGAKSLINEALIRGG------------------------- 292
RR R+D A+ LI E ++RG
Sbjct: 123 IWNCRRRRLD-----------QARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYE 171
Query: 293 ------------IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
IP + +Y+ L G++ +G ++L+EM G P +V + + ++
Sbjct: 172 CRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISG 231
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGC 399
L K +D+A +V + + +G VP Y+I+L L A L+ M + + GC
Sbjct: 232 LCKANRIDDAFQVFKGMLERGC-VPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGC 290
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
V T+ + LCR G+F A +L M+ P + +YN +I GLC G +A
Sbjct: 291 VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWK 350
Query: 460 WLEEMI-SQAKLPDISVWSSLVASVC 484
+M+ S PD+ +++L++ C
Sbjct: 351 LSRKMLDSGCCKPDVIFFNTLISGFC 376
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 207/522 (39%), Gaps = 94/522 (18%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ R + + + +M CE + + I A ++++A +
Sbjct: 44 NVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVL 103
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC- 162
+ L + +++TL+ + +L+ A L E+ R NL++ + C
Sbjct: 104 QELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLI------REMILRGSVCNLVVYIDCI 157
Query: 163 ------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+C+ S EM G PD +Y+ + GLC +L++ +L M
Sbjct: 158 FGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM---- 213
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK----------SRRHRI 266
+ G D+V + +++ LC +I DA Q+ + +L +G SR +R+
Sbjct: 214 DRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 273
Query: 267 DLCP---------------------------CNDGEDIEGAKSLINEALIRGGIPSLASY 299
D C G+ AK+++ + G +P+L SY
Sbjct: 274 DTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGK-FPLAKNILLGMIESGSLPNLLSY 332
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFW-PSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+ + L G + + K+ +M G P ++ + ++ K G + +A +++ E
Sbjct: 333 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMK 392
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
K VP V YN L+ G G+ A + L++M + VGC N TY L++G + G
Sbjct: 393 AKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM-QAVGCKPNVVTYAALINGYAKHGM 451
Query: 419 FLEASRVLEEMLIRSYWPCVETYN------------------------------------ 442
+ EA + +EM + +P + TYN
Sbjct: 452 YEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITY 511
Query: 443 -VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+LI G C + + L+EM ++ D ++ L+A +
Sbjct: 512 RILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKL 553
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M + +V Y L+ GLC +G+ A L+KM+ GC N TY L+DGLC+
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA-DAGCAPNVVTYTALIDGLCKAR 59
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R +A + ++ ML P + TYN LI GLC + +A + L+E++ P+ +S
Sbjct: 60 RPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYS 119
Query: 478 SLV 480
+LV
Sbjct: 120 TLV 122
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 13/268 (4%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCN 272
++ G +V Y TL+ LC G + A +L+K+ G AP + ID LC
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGC-APNVVTYTALIDGLCKAR 59
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D A + L G P L +Y+++ L R+ + VL E+ GF P+ +
Sbjct: 60 RPHD---AIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHI 116
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + + +D+A +I E +++G+ V + VY + G C+A + Y +
Sbjct: 117 TYSTLVIWNCRRRRLDQARGLIREMILRGS-VCNLVVYIDCIFGFCEA--RCQSSRYECR 173
Query: 393 MSKQV---GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
++ G + + TY + GLC+ G+ + +LEEM P V T+ +I GLC
Sbjct: 174 DGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLC 233
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ +A + M+ + +PD +S
Sbjct: 234 KANRIDDAFQVFKGMLERGCVPDSLTYS 261
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N YA++I ++ E + + D+M C + T + +++AG +++A
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492
Query: 102 LFKNLSQFN--CVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLM 158
+++ L C ++ L+ + E L + GW S + N+L+
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDS--YTYNVLI 550
Query: 159 DVLCQCRR-SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
L + AL V+Q+M Q C P ++ L++ +N A SM ++
Sbjct: 551 AKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSAR----SMVQEMN 606
Query: 218 QKG 220
+KG
Sbjct: 607 EKG 609
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 200/483 (41%), Gaps = 59/483 (12%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+P +RH +Y L + + EV+ M + +A G+L
Sbjct: 127 FPKFRHFMRLYIVSATALIGNKNLERANEVMQCM---------------VMNFAENGKLK 171
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EAV++ + V TQ+ N +L V +E A +F+ C V S L+
Sbjct: 172 EAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG-VSPDCVSFKLM 230
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ C R A M +G D + +++ C +N FW++
Sbjct: 231 VVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV----GYFWKMV 286
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPC--- 271
+ G +++ + L+ LC QG I+ A ++LE+++R+G K P H ID LC
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK-PNVYTHTTLIDGLCKKGWT 345
Query: 272 ------------NDG--EDIEGAKSLIN-----------EALI-----RGGIPSLASYSA 301
+DG ++ ++IN E L+ +G +P+ +Y+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G V +++D M +GF P++ Y A + L K G +DEA ++ + V G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
V Y IL+ C ++ ++++ KM K VG + +Y L+ CR + E
Sbjct: 466 LQADGV-TYTILMSVHCRQADTNRSLVFFNKMLK-VGFTPDIHSYTTLISTFCRQKQMKE 523
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ R+ EE + P +TY +I G C G AV + M + PD + +L++
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALIS 583
Query: 482 SVC 484
+C
Sbjct: 584 GLC 586
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 21/329 (6%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+++ EM QG P ++ + ++ + A +MF + Q+G D V ++
Sbjct: 173 AVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAE----NMFVEMCQRGVSPDCVSFK 228
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA-- 287
++ A C+ G++ +A + L ++ +G +D C D K +N
Sbjct: 229 LMVVACCNMGRVLEAERWLNAMVERGFI--------VDNATCTLIIDAFCQKGYVNRVVG 280
Query: 288 ----LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++ G+ P++ +++A+ L +G I + ++L+EM +G+ P++ + + L
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G ++A + + + + P V Y ++ G C A M L +M +Q G V N
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ-GLVPN 399
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+DG C+ G F+ A +++ M + P + TYN +I GLC G EA L
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADLN 491
+ +S L V +++ SV C AD N
Sbjct: 460 K-VSVHGLQADGVTYTILMSVHCRQADTN 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 180/425 (42%), Gaps = 51/425 (12%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQF----NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
I + + G +N V F + + N +N+T N L K+ + E + R
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR-- 323
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRR 201
GW K + + L+D LC+ ++ A +F ++ G P+ +Y ++ G C + +
Sbjct: 324 -GW--KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
LN A LL R+ ++G + Y TL+ C G A ++++ + ++G
Sbjct: 381 LNRAEMLLS----RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ I C G ++ A L+N+ + G +Y+ + + ++
Sbjct: 437 TYNAIIDGLCKKG-SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNK 495
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M GF P + Y ++ + + E+ + EE + G +PT + Y ++ G C G
Sbjct: 496 MLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG-LIPTKKTYTSMICGYCRYG 554
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC---- 437
N+++AV ++MS GC + TYG L+ GLC++ + +A + + M+ + PC
Sbjct: 555 NTSLAVKLFQRMSNH-GCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTR 613
Query: 438 ----------------------------VETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ T N L+R LCS GK A ++ +++ K
Sbjct: 614 LTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLD--K 671
Query: 470 LPDIS 474
P+++
Sbjct: 672 EPNVN 676
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 35/283 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L + K+ A ++F + + Y+ N Y +MI + +++ +
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLV-RSDGYKPNVHTYTAMINGYCKEDKLNRAE 385
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ + + T I + + G A L + + ++N ++ +
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 126 VKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K+ L+ A+ L + S +G + + +LM V C+ ++ +L F +M G P
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADG--VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503
Query: 185 DRESYHILMKGLCNDRRLNEA-------------------------------THLLYSMF 213
D SY L+ C +++ E+ T L +F
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R+S G D + Y L+ LC + K+ DA + + ++ KGL
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N Y ++I L + + E +++++ + + + + R N ++
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
F + + S+ TL+ ++ +++ + LF + + ++ ++ ++
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK-KTYTSMICG 549
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ + LA+ +FQ M GC PD +Y L+ GLC + +L++A +L +M KG
Sbjct: 550 YCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMM----DKG 605
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
V TL + C + A+ +L+++ ++
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKR 639
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 208/461 (45%), Gaps = 51/461 (11%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ L ++ R+ + V D M + + F R Y RAG+ +A+ + + N
Sbjct: 151 LLQALCDAGRMELAQRVFDAMPARN----EFSFGILARGYCRAGRSIDALKVLDGMPSMN 206
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
V NT++ KE +E A L R + + + N + LC+ R A
Sbjct: 207 LV----VCNTVVAGFCKEGLVEEAERLVERMRV-QGLAPNVVTFNARISALCKAGRVLDA 261
Query: 171 LHVFQEM--DFQGCYP--DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+FQ+M D+Q P D+ ++ +++ G C+ ++EA L+ M G +
Sbjct: 262 YRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM----RCGGFLRRVE 317
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLIN 285
Y L L G++ +A ++L ++ +G++ P S + I + C +G+ + +
Sbjct: 318 SYNRWLSGLVRNGRVGEAQELLREMAHEGIQ-PNSYTYNIIVSGLCKEGKAFDARRV--- 373
Query: 286 EALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E IR G+ P + +Y+++ ++G I +++LDEM KG P+ Y L +L++
Sbjct: 374 ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWR 433
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA----------------------- 380
G EA ++E KG + T NI++ GLC
Sbjct: 434 AGRTTEAERLLERMNEKGYSLDTAGC-NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGR 492
Query: 381 -GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
GNS ++V+ +S++ C+ + TY IL+ LC++GRF EA + L EM+++ P
Sbjct: 493 LGNSFLSVVSDSSISQR--CLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSV 550
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
Y+ I G C GK A+ L +M + P ++ L+
Sbjct: 551 IYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI 591
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 210/457 (45%), Gaps = 47/457 (10%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ---- 116
+ E + ++++M+ F I +AG++ +A +F+++ + +W
Sbjct: 223 VEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE----DWQHGLPR 278
Query: 117 ----SFNTLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
+F+ +L ++ A +L + C G+ R++S N + L + R A
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGF--LRRVESYNRWLSGLVRNGRVGEAQ 336
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ +EM +G P+ +Y+I++ GLC + + +A + F R D+V Y +L
Sbjct: 337 ELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV--ENFIRSGVMSP--DVVTYTSL 392
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSL--INE-- 286
L A C +G I A +IL+++ +KG AP S + + L G E + L +NE
Sbjct: 393 LHAYCSKGNIAAANRILDEMAQKGC-APNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451
Query: 287 -ALIRGG----IPSLASYSAM--AIDLYNEGRIVEGDKVL------------DEMRTKGF 327
+L G I L S + A+D+ +G EG L D ++
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIV-DGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P + Y ++AL K+G DEA + + E +VK P +Y+ + G C G +++A+
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVK-DISPDSVIYDTFIHGYCKHGKTSLAI 569
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
L+ M K+ GC + TY +L+ G + E +++ EM + P V TYN LI+
Sbjct: 570 KVLRDMEKK-GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKS 628
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G +A+ L+EM+ +P+I+ + L+ + C
Sbjct: 629 FCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYC 665
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 196/446 (43%), Gaps = 34/446 (7%)
Query: 25 LTALKIFKEAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
L A +IF++ +E +++H P + M+ ++ + E + ++D M+ +
Sbjct: 259 LDAYRIFQDMQE---DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRR 315
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL-- 137
+ + R G++ EA L + ++ + ++N ++ + KE K A +
Sbjct: 316 VESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVEN 375
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
F+RS + + + L+ C A + EM +GC P+ +Y++L++ L
Sbjct: 376 FIRSGV---MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLW 432
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R EA LL R+++KG D ++ LC ++ AM I++ + +G
Sbjct: 433 RAGRTTEAERLLE----RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSG 488
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALI-RGGIPSLASYSAMAIDLYNEGRIVEGD 316
A G S+++++ I + +P +YS + L EGR E
Sbjct: 489 AL--------------GRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAK 534
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K L EM K P V+Y+ + K G A++V+ + KG P+ R YN+L++G
Sbjct: 535 KKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCN-PSTRTYNLLIRG 593
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
+ + + +M L K+ G N TY L+ C+ G +A +L+EML P
Sbjct: 594 F-EEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLE 462
+ ++++LI+ C I A M +
Sbjct: 653 NITSFDLLIKAYCKITDFPSAQMVFD 678
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 178/405 (43%), Gaps = 36/405 (8%)
Query: 96 LNEAVSLFKNLSQFNCVN--WTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSR 150
L A+ F++L T +N L+ ++ES+L+ L+ L S +V +R
Sbjct: 89 LRLAIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTR 148
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
NLL+ LC R +LA VF M + + S+ IL +G C R +A +L
Sbjct: 149 ----NLLLQALCDAGRMELAQRVFDAMPARNEF----SFGILARGYCRAGRSIDALKVLD 200
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK--SRRHRIDL 268
M ++V+ T++ C +G +++A +++E++ +GL AP + RI
Sbjct: 201 GM--------PSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGL-APNVVTFNARISA 251
Query: 269 CPCNDGEDIEGAKSLIN------EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
C G ++ + + L R P ++ M + G + E ++D M
Sbjct: 252 L-CKAGRVLDAYRIFQDMQEDWQHGLPR---PDQVTFDVMLSGFCDAGFVDEARVLVDIM 307
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
R GF + Y L+ L ++G V EA E++ E M P YNI++ GLC G
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAQELLRE-MAHEGIQPNSYTYNIIVSGLCKEGK 366
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A ++ + + TY L+ C G A+R+L+EM + P TYN
Sbjct: 367 -AFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
VL++ L G+ EA LE M + D + + ++ +C N+
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNS 470
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 19/246 (7%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVID 69
T++ K K+ L A+K+ ++ ++K P+ R Y +I E ++ E+ +++
Sbjct: 554 TFIHGYCKHGKTSL-AIKVLRDMEKKGCNPSTR----TYNLLIRGFEEKHKSEEIMKLMS 608
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+MK + + I+++ + G +N+A+ L + Q V SF+ L+K K +
Sbjct: 609 EMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKIT 668
Query: 130 KLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
+A ++F LR+C EV + L ++ L + + + Q +P
Sbjct: 669 DFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQS-FP-- 725
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
Y ++ GLC + E H +S+ + K D + ++ AL D+GK QD
Sbjct: 726 --YKQIISGLCE---VGEVDH-AHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDM 779
Query: 247 ILEKIL 252
+ K++
Sbjct: 780 LSAKMM 785
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 49/402 (12%)
Query: 117 SFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
+++T ++ K +AA +F R C EV + N+++ LC+ + A
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV-----TYNVMISGLCRSGAVEEAFG 299
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+EM G PD +Y LM GLC RL EA LL M S G +IV+Y TL+
Sbjct: 300 FKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM----SCSGLKPNIVVYGTLV 355
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE----------------- 275
+GK +A IL++++ G++ K + C G+
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415
Query: 276 -----------------DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
D +GA L+NE G +P++ SY M L G E +
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+EM ++G P+ MY + K+G + A E + E+M K P + YN L+KGL
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL-EKMTKANVHPDLFCYNSLIKGLS 534
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A Y ++ K+ G V + TY L+ G C+ G +A ++L +ML P
Sbjct: 535 TVGRMEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+TY L+ G + L+ M+ PD ++ ++
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 199/473 (42%), Gaps = 44/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +++ + + E +++ +M + ++ IR + GQL A L K +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ T ++N L++ ++ + A L L + + S ++++ LCQ
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFEL-LNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 167 SDLALHVFQEMDFQG-----------------------------------CYPDRESYHI 191
S A ++ +EM +G +PD Y+
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+KGL R+ EA + ++ ++G D Y L+ C G ++ A Q+L ++
Sbjct: 529 LIKGLSTVGRMEEAEEY----YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L GLK P + + L D E S++ L G P Y + +L
Sbjct: 585 LNSGLK-PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ VL E+ G P L +Y + ++ L K +++A+ +++E M K P + YN
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE-MAKEGLEPGIVCYN 702
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G C +G+ + A + + G V N TY L+DG C++G +A + +EML
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAK-GLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R P YNVL G CS E ++L E + ++S++++LV C
Sbjct: 762 RGIAPDAFVYNVLATG-CSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFC 813
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 198/478 (41%), Gaps = 42/478 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + +R+ E K ++D+M + V+ T + + + G+ EA + K +
Sbjct: 315 TYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEM 374
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L++ + K +L A L L+ ++ + N LM Q
Sbjct: 375 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKL-LKEMIKVGLRPDTFTYNPLMQGHFQQHD 433
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + EM G P+ SY I++ GLC + EA +LL M +G +
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI----SEGLKPNAF 489
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y L+ +G I A + LEK+ + + P + + + +E A+ +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVH-PDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD-- 344
RG +P +YS + G + + D++L +M G P+ Y L FK
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608
Query: 345 -----------------------GMV------DEALEV---IEEEMVKGTFVPTVRVYNI 372
G+V E +EV + E+ K VP + +Y+
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L+ GLC + AV L +M+K+ G Y L+DG CR G A V + +L +
Sbjct: 669 LISGLCKIADMEKAVGLLDEMAKE-GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 727
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
P TY LI G C G +A +EM+ + PD V++ L A+ C + ADL
Sbjct: 728 GLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL-ATGCSDAADL 784
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 184/429 (42%), Gaps = 27/429 (6%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+V + TY + G + A + ++ + N LLK++++ +E
Sbjct: 174 AVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELL------ 227
Query: 141 SCYGWEVKSRIQSLNLLMDVL---------CQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
W++K ++ +L DV C+ R D A VF+EM + C + +Y++
Sbjct: 228 ----WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV 283
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ GLC + EA + + G D Y L+ LC ++++A +L+++
Sbjct: 284 MISGLCRSGAVEEA----FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
GLK + +G+ E A ++ E + G P+ Y + L G+
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAE-AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQ 398
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ K+L EM G P Y + F+ D A E++ EM +P V Y
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELL-NEMRNSGILPNVYSYG 457
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
I++ GLC G S A L++M + G N Y L+ G ++G A LE+M
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+ P + YN LI+GL ++G+ EA + ++ + +PD +S L+ C T +L
Sbjct: 517 ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY-CKTGNLE 575
Query: 492 VCRKTLEQL 500
+ L Q+
Sbjct: 576 KADQLLRQM 584
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+ R++ PS + + + K G V A +V+ M PT R N LLK L A
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLM-MADLGLAPTRRCCNGLLKDLLRA 221
Query: 381 GNSAVAVMY-LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A+ +++ LK + G + + TY ++ C+ F A +V EEM R
Sbjct: 222 --DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV 279
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
TYNV+I GLC G EA + EEM+ PD + +L+ + C + L + L++
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL-CKGSRLKEAKALLDE 338
Query: 500 LSSCS 504
+ SCS
Sbjct: 339 M-SCS 342
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 6/366 (1%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ N V WT L K E EA + + + + ++ LC+ R
Sbjct: 7 APLNNVAWTAFLGGLCKSGKIEQAFEACRTM--QESLSSSQPPSSGTCHSVIQELCKAGR 64
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL + + M +G PD ++ +L+ LC ++ EA L M IS + S
Sbjct: 65 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS--CF 122
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +LL +LC K+ A I ++ + P + I + +++ A+ L +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +P++ +Y+A L +GRI + V +EM + G P ++ Y +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
D+A E+ E + +G P YN LL GLC A +KM ++ GC + TY
Sbjct: 243 HDQAHELFEAMISRGC-RPNAVTYNCLLHGLCKESKPDEAHELFRKMVER-GCDPDKVTY 300
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ G C G+ +A V +EM+ + + P V YN L++G GK EA + M+S
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360
Query: 467 QAKLPD 472
+ PD
Sbjct: 361 RECKPD 366
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 168/380 (44%), Gaps = 9/380 (2%)
Query: 78 CKD-SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ--SFNTLLKEMVKESKLEAA 134
C D + + I +A ++ EA + +++ + S+N+LL + K K+ A
Sbjct: 81 CPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQA 140
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F V + S ++L+D C+ A ++++M C P+ +Y+ +
Sbjct: 141 FAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 200
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GL R+ +A ++ + G D++ Y TL+ K A ++ E ++ +
Sbjct: 201 GLMRKGRIADAQ----GVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C + + E A L + + RG P +Y+ + N G+I +
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDE-AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQ 315
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+V DEM +KG P +V Y L F+ G EA ++ + MV P +NI++
Sbjct: 316 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV-MVSRECKPDTVSHNIMI 374
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GL A AV ++M + GC + TY L+ GLC + R EA +V +E+
Sbjct: 375 DGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKL 434
Query: 435 WPCVETYNVLIRGLCSIGKQ 454
P +NVL+ + + G +
Sbjct: 435 SPDPHAFNVLLEAMYAAGHK 454
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 193/448 (43%), Gaps = 17/448 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT---AIRTYARAGQLNEAV 100
N + + +G L +S +I + E M+ + T I+ +AG+++ A+
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS---LNLL 157
SL + + + + + L+ E+ K K++ A FL+ + +R S N L
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ-EFLQG-MNRTISTRASSCFSYNSL 127
Query: 158 MDVLCQCRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++ LC+ ++ A +F M + PD SY IL+ G C L A L M
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI--- 184
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
++ Y L L +G+I DA + E+++ G +P + + +
Sbjct: 185 -DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGC-SPDVITYSTLIHGFSLARK 242
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A L + RG P+ +Y+ + L E + E ++ +M +G P V Y
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L G +++A+EV +E + KG P V YN LLKG AG A + M +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKG-HDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEM-LIRSYWPCVETYNVLIRGLCSIGKQY 455
C + ++ I++DGL + R +A V E M P + TYN LI GLC +
Sbjct: 362 -ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
EA+ +E+ PD ++ L+ ++
Sbjct: 421 EAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 7/264 (2%)
Query: 226 VIYRTLLFALCDQGKIQDAMQ---ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
V + L LC GKI+ A + +++ L H + C G ++ A S
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGR-VDSALS 70
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RT-KGFWPSLVMYEAKLAA 340
L+ + RG P +A++S + +L +I E + L M RT S Y + L +
Sbjct: 71 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNS 130
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K V +A + + + + VP V Y+IL+ G C A K+M + CV
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI-DLNCV 189
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY ++GL R GR +A V EEM+ P V TY+ LI G K +A
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
E MIS+ P+ ++ L+ +C
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLC 273
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I + + + +++ QM +C + + + R G++ +A +++ +
Sbjct: 160 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMI 219
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQ 163
C +++TL+ K + AH LF R C + + N L+ LC+
Sbjct: 220 SAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC-----RPNAVTYNCLLHGLCK 274
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D A +F++M +GC PD+ +Y L+ G CN ++ +A + F + KG
Sbjct: 275 ESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV----FDEMVSKGHDP 330
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y LL GK +A Q+ + ++ + K P + H I + + + ++ A +
Sbjct: 331 DVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK-PDTVSHNIMIDGLSKAKRLDDAVEV 389
Query: 284 INE-ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
G P L +Y+++ L E R+ E KV E+ P + L A++
Sbjct: 390 FERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449
Query: 343 KDG 345
G
Sbjct: 450 AAG 452
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L + K+ P A ++F++ E+ + Y +++ +I +
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVER--GCDPDKVTYTTLLYGFCNVGKIEQAV 317
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV D+M + + ++ + RAG+ EA LF+ + C T S N ++ +
Sbjct: 318 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +L+ A +F R + + N L+ LC +R A+ VF+E+D PD
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437
Query: 186 RESYHILMKGL 196
++++L++ +
Sbjct: 438 PHAFNVLLEAM 448
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 41/313 (13%)
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
H Q D G PD S+ L+ G C + R EA LL +M WR +G D +
Sbjct: 167 HARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAM-WR---EGFSLDSATCTVV 222
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ A C QG+ +D + +++ G
Sbjct: 223 VRAFCRQGRFRDVPGLFGRMVEMG------------------------------------ 246
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P++ +Y+A L G + + VL+EM KG P++ + + + L K G + A
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ + + ++ P V Y +++ G C G A A M L +M +Q G N TY L+D
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ-GLAPNTNTYTTLID 365
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G CR G F A ++ +M + + P + TYN +I G C GK +A L SQ P
Sbjct: 366 GHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCP 425
Query: 472 DISVWSSLVASVC 484
D ++ L+ C
Sbjct: 426 DKVTYTMLITEHC 438
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 181/414 (43%), Gaps = 19/414 (4%)
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF----NCV 112
+ R E ++ M + + +R + R G+ + LF + + N V
Sbjct: 193 QEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVV 252
Query: 113 NWTQSFNTLLKE-MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
N+T + L K VK+ A H+L G +K + + L+D LC+ ++ A
Sbjct: 253 NYTAWVDGLCKRGYVKQ----AFHVL--EEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306
Query: 172 HVFQEMDFQGCY-PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+F ++ Y P+ +Y +++ G C + +L A LL R+ ++G + Y T
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL----GRMVEQGLAPNTNTYTT 362
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C G A +++ K+ +G + I C G+ I+ A ++ A +
Sbjct: 363 LIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK-IQQAYKVLRMATSQ 421
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +Y+ + + +G I + ++M P + Y +A + ++++
Sbjct: 422 GLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQS 481
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ ++ + G VPT + Y ++ G C G S A+ ++M Q GC+ + TYG L+
Sbjct: 482 QQLFDKCLSIG-LVPTKQTYTSMIAGYCRVGKSTSALKVFERMV-QHGCLPDPITYGALI 539
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
GLC++ R EA + E ML + PC T L C K AV +L+ +
Sbjct: 540 SGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGL 593
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 15/338 (4%)
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+D LC+ A HV +EM +G P+ ++ L+ GLC A L + S
Sbjct: 258 VDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSS 317
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
K ++ Y ++ C +GK+ A +L +++ +GL AP + + + G
Sbjct: 318 YK---PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL-APNTNTYTTLIDGHCRGGSF 373
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A L+N+ + G +P++ +Y+A+ +G+I + KVL ++G P V Y
Sbjct: 374 DRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTML 433
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K G + AL++ + M + + P + Y ++ C + K +
Sbjct: 434 ITEHCKQGHITYALDLFNQ-MAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDK-CLSI 491
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G V +TY ++ G CR G+ A +V E M+ P TY LI GLC + EA
Sbjct: 492 GLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRK 495
E M+ + +P V C T CR+
Sbjct: 552 RALFETMLDKHMVP---------CDVTCVTLAYEYCRR 580
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 186/417 (44%), Gaps = 27/417 (6%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
++ R AG+ +A S+ + + + T +++ +L + SK+E A +LF
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKR 511
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V + + + +++D C+ + A F EM GC P+ +Y L+ ++++
Sbjct: 512 GGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L +M +G +IV Y L+ C G+++ A QI E+
Sbjct: 571 YANELFETML----SEGCLPNIVTYSALIDGHCKAGQMEKACQIFER------------- 613
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+C D D++ ++ P++ Y A+ R+ E K+LD M
Sbjct: 614 ----MCGSKDVPDVDMYFKQYDDD--NSERPNVVIYGALLDGFCKLHRVEEARKLLDAMS 667
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ ++Y+A + L K G +DEA EV + EM + F T+ Y+ L+
Sbjct: 668 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+A L KM + C N Y ++DGLC+ G+ EA ++++ M + P V TY
Sbjct: 727 DLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 785
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G IGK + LE M S+ P+ + L+ CC L+V LE++
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDH-CCKNGALDVAHNLLEEM 841
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/591 (21%), Positives = 225/591 (38%), Gaps = 122/591 (20%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ + + ++++ + P + F A + Y+H PVY +++ ++ + +E++
Sbjct: 130 LSESLVIEVLRLIERPSAVISFFVWAGRQI-GYKHTSPVYNALVDLIVRDDDEKVPEELL 188
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
Q++ D E +R Y R+G + A+ L F ++N L++ +K
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 129 SKLEAAHIL-------------FLRSCYGW---------EVKSRIQSLNLLMDV------ 160
L++A ++ F CY + E + +++ N + D
Sbjct: 249 DCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKL 308
Query: 161 ---LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
LC+ + A+ M C P+ +Y L+ G N ++L +L
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGK------ 240
Y + ++ + G V+Y L+ ++C
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHL 428
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
++ A + ++L G+ K C C+ G+ E A S+I E + +G IP ++YS
Sbjct: 429 LELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYS 487
Query: 301 -------------------------AMAIDLYN----------EGRIVEGDKVLDEMRTK 325
+ D+Y G I + K +EMR
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + A K V A E+ E + +G +P + Y+ L+ G C AG
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQMEK 606
Query: 386 AVMYLKKM--SKQVGCV--------------ANGETYGILVDGLCRDGRFLEASRVLEEM 429
A ++M SK V V N YG L+DG C+ R EA ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P Y+ LI GLC +GK EA EM + +SSL+
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 192/467 (41%), Gaps = 29/467 (6%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+ + Y +I L E++ E + +++M+ SC ++T + QL
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + C + FN+L+ A+ L + + N+L+
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYV-VYNILIG 415
Query: 160 VLC------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+C C +LA + EM G ++ + + LC+ + +A +S+
Sbjct: 416 SICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA----FSVI 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ +G D Y +L LC+ K++ A + E++ R GL A + C
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G IE A+ NE G P++ +Y+A+ ++ +++ + M ++G P++V
Sbjct: 532 GL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 334 YEAKLAALFKDGMVDEALEVIEE----------EMVKGTF------VPTVRVYNILLKGL 377
Y A + K G +++A ++ E +M + P V +Y LL G
Sbjct: 591 YSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGF 650
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A L MS + GC N Y L+DGLC+ G+ EA V EM +
Sbjct: 651 CKLHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPAT 709
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ TY+ LI + +Q A L +M+ + P++ +++ ++ +C
Sbjct: 710 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 45/387 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y +++ + +R+ E ++++D M + CE V+ I + G+L+EA
Sbjct: 637 RPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-- 694
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+E K E + F + Y + + L+D
Sbjct: 695 -------------------------QEVKAEMSEHGFPATLYTY---------SSLIDRY 720
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +R DLA V +M C P+ Y ++ GLC + +EA Y + + +KG
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA----YKLMQMMEEKGC 776
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y ++ GKI+ +++LE++ KG+ AP +R+ + C ++ A
Sbjct: 777 QPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAH 835
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L+ E + + P+ A+ I+ +N+ +E +LDE+ P L +Y + L
Sbjct: 836 NLLEE-MKQTHWPTHAAGYRKVIEGFNK-EFIESLGLLDEIGQDDTAPFLSLYRLLVDNL 893
Query: 342 FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K ++ AL ++EE T V YN L++ LC A A +MSK+ G +
Sbjct: 894 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKK-GVI 952
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLE 427
+T+ L+ GL R+ + EA +L+
Sbjct: 953 PEMQTFCSLIKGLFRNSKISEALLLLD 979
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 192/476 (40%), Gaps = 61/476 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y M+ ++ I + ++ ++M+ C + I Y +A +++ A LF+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C+ +++ L+ K ++E A +F R C +V
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDV------------------- 620
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D+ ++ Q D P+ Y L+ G C R+ EA LL +M S +G + +
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM----SMEGCEPNQI 676
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAP-KSRRHRIDLCPCNDGEDIEGAKSLIN 285
+Y L+ LC GK+ +A ++ ++ G A + ID +D+ A +++
Sbjct: 677 VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL--ASKVLS 734
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ L P++ Y+ M L G+ E K++ M KG P++V Y A + + G
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ--------- 396
++ LE++E KG P Y +L+ C G VA L++M +
Sbjct: 795 KIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGY 853
Query: 397 -----------------VGCVANGET------YGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ + +T Y +LVD L + R A R+LEE+ S
Sbjct: 854 RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFS 913
Query: 434 --YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
TYN LI LC K +A EM + +P++ + SL+ + N+
Sbjct: 914 ATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNS 969
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 204/478 (42%), Gaps = 49/478 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S+++ E ++ +M + C + I +AG+ NEA +F L
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ N ++NTLL + +E K++ L L I + N ++D LC+
Sbjct: 548 KEMNLEPTDCTYNTLLAGLGREGKVKEVMQL-LEGMNSNSFPPNIITYNTVLDCLCKNGE 606
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ--KGSGED 224
+ AL + M GC PD SY+ +M GL + RL+EA FW Q K D
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEA-------FWMFCQMKKVLAPD 659
Query: 225 IVIYRTLLFALCDQGKIQDAMQ-ILEKILRKGLKAPKSRRHRI-DLCPCNDG-------- 274
T+L + G +++A+ + E IL+ K +S H + + DG
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFA 719
Query: 275 EDIEGAKSLINEALIRGGIPSL-------------------------ASYSAMAIDLYNE 309
E+I + L+++ + I L SY+A+ L +E
Sbjct: 720 ENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I +++ EM+ G P Y L A+ K +++ L+ I+EEM + T
Sbjct: 780 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLK-IQEEMHNKGYKSTYVT 838
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y + MS+ G TYG L+DGL +DG +A + +E
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSE--GFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
ML P YN+L+ G G + E M+ Q PDI ++ ++ ++C +
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 191/463 (41%), Gaps = 21/463 (4%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
P AL++F + P H M+ ++ R+ ++ +V D M+ + F
Sbjct: 81 PEEALELFLSVARQ-PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T G L A + + V ++N L+ +VK S + + ++
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVK-SGFDREAMDVYKAMA 198
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V +++ ++LM + R ++ + + EM+ +G P+ SY I ++ L RL
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA Y + ++ ++G D+V L+ LCD G++ DA + K +KA +
Sbjct: 259 EA----YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWK-----MKASDQKP 309
Query: 264 HRID----LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
R+ L C D D + N G ++ SY+A L GR+ E V
Sbjct: 310 DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVF 369
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
DEM+ KG P Y + ++ K + ALE+ + G PT Y +L +
Sbjct: 370 DEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG---PTPNGYTHVLF-INY 425
Query: 380 AGNSAVAVMYLKK--MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G S ++ LK+ + K G V + ++ GL + GR A RV E+ P
Sbjct: 426 HGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY ++I+ EA+ EMI PD+ +SL+
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 208/498 (41%), Gaps = 56/498 (11%)
Query: 22 KSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
+S AL + KEA Y +NG +Y L +S E +V M D
Sbjct: 153 RSAPVALPVMKEAGIVLNAYTYNGLIY-----FLVKSGFDREAMDVYKAMAADGVVPTVR 207
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ + + + V L + S+ ++ + + +LE A+ + LR
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI-LRK 266
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + + +L+ +LC R A VF +M PDR +Y L+ C D
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSG 325
Query: 202 LNEATHLLYSMFWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG----- 255
+ + S W + G +++V Y + ALC G++ +A+ + +++ +KG
Sbjct: 326 DSRSV----SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381
Query: 256 ----------LKAPKSRR------HRIDLCPCND-----------GEDIEGAKSLINEAL 288
LKA + R H P + G+ E K+L L
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 289 I--RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G +P + + +A+ L GR+ +V E++ G P + Y + K
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA--GNSAVAVMY-LKKMS-KQVGCVAN 402
DEA+++ EM++ P V N L+ L A GN A + Y LK+M+ + C
Sbjct: 502 ADEAMKIF-AEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDC--- 557
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+ GL R+G+ E ++LE M S+ P + TYN ++ LC G+ A+ L
Sbjct: 558 --TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLY 615
Query: 463 EMISQAKLPDISVWSSLV 480
M +PD+S +++++
Sbjct: 616 SMTMNGCMPDLSSYNTVM 633
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 189/444 (42%), Gaps = 24/444 (5%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQ-----MKGDSCECKDSVFATAIRTYARAGQLNEAV 100
P YA++ IL R MKE + ++ DS + SV + R G +++
Sbjct: 658 PDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGT-EKSI 716
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+N++ + + +++ + K + AAH L ++ V + S N L+
Sbjct: 717 EFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHEL-VKKFENLGVSLKTGSYNALICG 775
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L D+A +F EM GC PD +YH+++ + R+ + + M KG
Sbjct: 776 LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM----HNKG 831
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y T++ L + +A+ + +++ +G + DG +IE A
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDG-NIEDA 890
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD-----KVLDEMRTKGFWPSLVMYE 335
++L +E L G P+ A Y+ + G + GD ++ + M +G P + Y
Sbjct: 891 EALFDEMLECGCEPNCAIYNILL-----NGYRIAGDTEKVCELFESMVEQGMNPDIKSYT 945
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L DG +++ L ++ G P + YN+L+ GL +G A+ M K
Sbjct: 946 VVIDTLCADGRLNDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G N TY L+ L + G+ EA ++ EE+L + + P V TYN LIRG G
Sbjct: 1005 K-GIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPE 1063
Query: 456 EAVMWLEEMISQAKLPDISVWSSL 479
A MI P+ S + L
Sbjct: 1064 NAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 214/512 (41%), Gaps = 47/512 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + L K++ T + + E + + R N Y I +L ++ R+ E
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR--GVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ + C+ I+ AG+L +A +F + + ++ TLL +
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 126 VKESKLEA-AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + I G+ + S +D LCQ R D AL VF EM +G P
Sbjct: 322 GDSGDSRSVSEIWNALKADGY--NDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 185 DRESYHILMKGLCNDRRLNEA-----------------THLLY--------------SMF 213
+ SY+ L+ G R N A TH+L+ +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ KG D+V +L+ L G++ A ++ ++ G+ +P + + + + C+
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI-SPDNITYTMMIKCCSK 498
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ + A + E + P + + +++ LY GR E K+ E++ P+
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLK 391
Y LA L ++G V E ++++ E M +F P + YN +L LC G N A+ ++Y
Sbjct: 559 YNTLLAGLGREGKVKEVMQLL-EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M+ GC+ + +Y ++ GL ++ R EA + +M + P T ++
Sbjct: 618 TMN---GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRS 673
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G EA+ + E I Q PD V S V S+
Sbjct: 674 GLMKEALHTVREYILQ---PDSKVDRSSVHSL 702
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 291 GGIPSLASYSAM--AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G +P++ +YS + A + V G +L EM +G P++ Y + L + G ++
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVG--LLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 349 EALEVI---EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA--VMYLKKMSKQVGCVANG 403
EA ++ EEE K P V +L++ LCDAG A A V + K S Q +
Sbjct: 259 EAYRILRKMEEEGCK----PDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK---PDR 311
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+D G S + + Y V +Y + LC +G+ EA+ +E
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 464 MISQAKLPDISVWSSLVAS 482
M + +P ++SL++
Sbjct: 372 MKQKGIIPQQYSYNSLISG 390
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 184/424 (43%), Gaps = 20/424 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + R G A+SLF SQ + T S TL ++ AH+ F S
Sbjct: 57 VFDKLLGAIVRMGHYPTAISLF---SQLHSKGITPSIATL--TILINCYCHQAHLSFAFS 111
Query: 142 CYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
G +K Q + N L++ C A+ ++ +G D SY L+ GLC
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ + +A LL M + + +++ Y T++ LC I DA+++ + +G+
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRP----NLITYSTVIDGLCKDRLIADALRLFSLVTSRGIL 227
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + C+ G+ E + L ++RG I P +++ + L EGRIVE
Sbjct: 228 VDVVAYNSLIHGCCSVGQWREATRLL--TMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
V M +G P +V Y A + V EA E+ MVK P V YN+L+ G
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNR-MVKRGLEPDVLNYNVLING 344
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C A++ K++ + V N TY L+DGLC+ GR +++EM R P
Sbjct: 345 YCKIDMVDEAMVLFKEIRCK-NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSP 403
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKT 496
+ TYN+ + C K YE + L I Q PD ++ +V + C L + +
Sbjct: 404 DIVTYNIFLDAFCK-SKPYEKAISLFRQIVQGIWPDFYMYDVIVENF-CKGEKLKIAEEA 461
Query: 497 LEQL 500
L+ L
Sbjct: 462 LQHL 465
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 191/447 (42%), Gaps = 14/447 (3%)
Query: 42 RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
+H P V+ ++G + + Q+ + I Y L+
Sbjct: 49 KHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSF 108
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLL 157
A SL + + +FNTL+ + A L G+ + S L
Sbjct: 109 AFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEF--SYGSL 166
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ LC+ ++ AL + Q+M+ P+ +Y ++ GLC DR + +A L F ++
Sbjct: 167 INGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRL----FSLVT 222
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+G D+V Y +L+ C G+ ++A ++L ++R + + + C +G +
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A+ + + RG P + +Y+A+ + E ++ + M +G P ++ Y
Sbjct: 283 E-AQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K MVDEA+ + +E K VP + YN L+ GLC G + + +M +
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCK-NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR- 399
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G + TY I +D C+ + +A + + +++ WP Y+V++ C K A
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ-IVQGIWPDFYMYDVIVENFCKGEKLKIA 458
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
L+ ++ P++ ++ ++ ++C
Sbjct: 459 EEALQHLLIHGCCPNVRTYTIMINALC 485
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 181/391 (46%), Gaps = 11/391 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-LRS 141
+ + I + GQ +A+ L + + + +++T++ + K+ + A LF L +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G V + + N L+ C + A + M PD +++IL+ LC + R
Sbjct: 223 SRGILVD--VVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ EA +F + ++G DIV Y L+ C + +A ++ +++++GL+ P
Sbjct: 281 IVEAQ----GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE-PDV 335
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + + ++ A L E + +P+LA+Y+++ L GR+ +++DE
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P +V Y L A K ++A+ + + +V+G + P +Y+++++ C
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ-IVQGIW-PDFYMYDVIVENFCKGE 453
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+A L+ + GC N TY I+++ LC+D F EA +L +M P T+
Sbjct: 454 KLKIAEEALQHLLIH-GCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTF 512
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+I L + +A EMI + + D
Sbjct: 513 ETIIGALQERNETDKAEKLRLEMIERGLVND 543
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 188/422 (44%), Gaps = 12/422 (2%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
VF G + EA+ F + +F T+S N LL + K K + F +
Sbjct: 26 GVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK-RFFK 84
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G K + + N+++D +C+ + A +F+EM F+G PD +Y+ ++ G
Sbjct: 85 DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVG 144
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
RL++ F + D++ Y L+ C GK+ ++ ++ R GLK
Sbjct: 145 RLDDTV----CFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVL 319
+ C +G + K ++ + G +P+ +Y+++ ID Y + G + + ++
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSL-IDAYCKIGNLSDAFRLA 258
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+EM G ++V Y A + L E L +++E MV+ TV + +L+ GLC
Sbjct: 259 NEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDE-MVELDIKVTVVTFCVLIDGLCK 317
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+ A+ Y ++S G AN Y ++DGLC+ + A+ + E+M + P
Sbjct: 318 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRT 377
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-CNTADLNVCRKTLE 498
Y L+ G G EA+ ++M+ D+ ++SLV + CN L R LE
Sbjct: 378 AYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQ--LQKARSFLE 435
Query: 499 QL 500
++
Sbjct: 436 EM 437
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P +++A + L GMV+EA++ +M + P R N LL G +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCF-SKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ K M G TY I++D +C++G A + EEM R P TYN +I G
Sbjct: 82 FFKDMIG-AGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+G+ + V + EEM PD+ +++L+ C
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 176
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 139/364 (38%), Gaps = 40/364 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI + + + + + ++MK + + I + + G+L++ V F+ +
Sbjct: 97 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N L+ K KL + F R +K + S + L+D C+
Sbjct: 157 KDMCCEPDVITYNALINCFCKFGKLPKG-LEFFREMKRNGLKPNVVSYSTLVDAFCKEGM 215
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L++A L M Q G ++V
Sbjct: 216 MQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML----QVGVEWNVV 271
Query: 227 IYRTLLFALCDQGKIQDAMQILEK--------------ILRKGLKAPKSRRHRIDLCP-- 270
Y L+ LC + + +L++ +L GL K ID
Sbjct: 272 TYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRI 331
Query: 271 CND-------------------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
ND G +E A +L + +G +P +Y+++ + +G
Sbjct: 332 SNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGN 391
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
++E + D+M G L+ Y + + L + +A +EE + +G V +
Sbjct: 392 VLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 451
Query: 372 ILLK 375
+L K
Sbjct: 452 VLKK 455
>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S LL D LC+ R A+ V + M G PD +Y L+ LC + A L+
Sbjct: 98 HSTQLLYD-LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEK 156
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G + V Y L+ LC G + ++Q +E++++KGL AP + + L
Sbjct: 157 M----EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL-APNAFTYSFLLEAA 211
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ A L++E +++GG P+L SY+ + EGR + + E+ KGF ++
Sbjct: 212 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 271
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y L L DG +EA ++ EM G P+V YNIL+ L G + A+ LK
Sbjct: 272 VSYNILLRCLCCDGRWEEANSLL-AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 330
Query: 392 KMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+MSK Q A +Y ++ LC++G+ + L+EM+ R P TYN I L
Sbjct: 331 EMSKGNHQFRVTAT--SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSL 387
Query: 449 CSIG-KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C K EA ++ + ++ K + S++ S+C
Sbjct: 388 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 424
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 201/450 (44%), Gaps = 53/450 (11%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSR 150
+A +L +A+ + + + + ++ L+ ++ K + A L + +G+ S
Sbjct: 108 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY--PSN 165
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ N L+ LC + +L + + +G P+ +Y L++ +R +EA LL
Sbjct: 166 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL- 224
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
I KG ++V Y LL C +G+ DAM + ++ KG KA + + C
Sbjct: 225 ---DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 281
Query: 271 CNDGEDIEGAKSLINEALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-- 326
C DG E A SL+ E + GG PS+ +Y+ + L GR + +VL EM +KG
Sbjct: 282 CCDGR-WEEANSLLAE--MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNH 337
Query: 327 -FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK------GTFVP-------------- 365
F + Y +A L K+G VD ++ ++E + + GT+
Sbjct: 338 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEA 397
Query: 366 --------------TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
T Y ++ LC GN+ A L +M++ G + TY L+
Sbjct: 398 FYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR-CGFDPDAHTYSALIR 456
Query: 412 GLCRDGRFLEASRVLEEML-IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC +G F A VL M + P V+ +N +I GLC I + A+ E M+ + ++
Sbjct: 457 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 516
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P+ + ++ LV + + +L + ++ L++L
Sbjct: 517 PNETTYAILVEGI-AHEDELELAKEVLDEL 545
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 182/409 (44%), Gaps = 13/409 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ Y ++ L + + +++++M+ + +R G LN+++
Sbjct: 130 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 189
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ L Q +++ LL+ KE EA +L G E + S N+L+ C
Sbjct: 190 ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE--PNLVSYNVLLTGFC 247
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R+D A+ +F+E+ +G + SY+IL++ LC D R EA LL M
Sbjct: 248 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM----DGGDRA 303
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKG---LKAPKSRRHRIDLCPCNDGEDIEG 279
+V Y L+ +L G+ + A+Q+L K + KG + + + + C +G+ ++
Sbjct: 304 PSVVTYNILINSLAFHGRTEQALQVL-KEMSKGNHQFRVTATSYNPVIARLCKEGK-VDL 361
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
++E + R P+ +Y+A+ + ++ E ++ + K + Y++ +
Sbjct: 362 VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT 421
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L + G A +++ E M + F P Y+ L++GLC G A+ L M + C
Sbjct: 422 SLCRKGNTFAAFQLLYE-MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC 480
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + ++ GLC+ R A V E M+ + P TY +L+ G+
Sbjct: 481 KPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 529
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIP 294
D+ + D+ LE ++ G K + ++ DLC N ++ A +I + G IP
Sbjct: 73 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR---LKKAIRVIELMVSSGIIP 129
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++Y+ + L G + +++++M G+ + V Y A + L G ++++L+ +
Sbjct: 130 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 189
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E M KG P Y+ LL+ + AV L ++ + G N +Y +L+ G C
Sbjct: 190 ERLMQKG-LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK-GGEPNLVSYNVLLTGFC 247
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++GR +A + E+ + + V +YN+L+R LC G+ EA L EM + P +
Sbjct: 248 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV 307
Query: 475 VWSSLVASV 483
++ L+ S+
Sbjct: 308 TYNILINSL 316
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 108/202 (53%), Gaps = 3/202 (1%)
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E+L+ GG P++A + + DL R+ + +V++ M + G P Y + L K
Sbjct: 85 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 144
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V A++++E+ G TV YN L++GLC G+ ++ +++++ Q G N
Sbjct: 145 GNVGYAMQLVEKMEDHGYPSNTV-TYNALVRGLCMLGSLNQSLQFVERL-MQKGLAPNAF 202
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L++ ++ EA ++L+E++++ P + +YNVL+ G C G+ +A+ E+
Sbjct: 203 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 262
Query: 465 ISQAKLPDISVWSSLVASVCCN 486
++ ++ ++ L+ +CC+
Sbjct: 263 PAKGFKANVVSYNILLRCLCCD 284
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 52 IGILSESN-RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
IG L E N ++ E +I + C + + I + R G A L +++
Sbjct: 384 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 443
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+++ L++ + E A + K + + N ++ LC+ RR+DLA
Sbjct: 444 FDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLA 503
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+ VF+ M + P+ +Y IL++G+ ++ L A +L + R
Sbjct: 504 MEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 548
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 212/468 (45%), Gaps = 51/468 (10%)
Query: 58 SNRITEMKEVIDQM--KGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
++R ++ + D++ D E K ++ F +R + ++EA+ F + +
Sbjct: 130 TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPK 189
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T++ N +L + + +++E A + F Y E+KS + + N++++VLC+ + A
Sbjct: 190 TETCNHILTLLSRLNRIENAWV-FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 248
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M+ G P +Y+ L++G R+ A ++ M KG D+ Y +L
Sbjct: 249 GIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM----KSKGFQPDMQTYNPILSW 304
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+C++G+ + ++ +++I GL P S + I + C++ D+E A + +E + +G +P
Sbjct: 305 MCNEGRASEVLREMKEI---GL-VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVL----------------------------------- 319
+ +Y+ + L+ E +I E ++L
Sbjct: 361 TFYTYNTLIHGLFMENKI-EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 320 -DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
DEM T G P+ Y + + L + EA E+ E+ + KG P + + N L+ G C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG-MKPDLVMMNTLMDGHC 478
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
GN A LK+M + + TY L+ GLC +G+F EA ++ EM R P
Sbjct: 479 AIGNMDRAFSLLKEMD-MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+YN LI G G A M +EM+S P + +++L+ + N
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 190/414 (45%), Gaps = 23/414 (5%)
Query: 77 ECKDSV--FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
E K +V F I + G+L +A + F ++NTL++ ++E A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 135 HILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
++ E+KS+ +Q+ N ++ +C R A V +EM G PD SY
Sbjct: 280 RLII------SEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL++G N+ L A ++ + ++G Y TL+ L + KI+ A ++
Sbjct: 331 NILIRGCSNNGDLEMA----FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+I KG+ + + C G D + A +L +E + G P+ +Y+++ L +
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHG-DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
+ E D++ +++ KG P LVM + G +D A +++E M + P
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE-MDMMSINPDDVT 504
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L++GLC G A + +M K+ G + +Y L+ G + G A V +EM
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L + P + TYN L++GL + A L EM S+ +P+ S + S++ ++
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 189/436 (43%), Gaps = 28/436 (6%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
++V ++M SC A R G+ ++A + K + + V T +++ ++
Sbjct: 405 EKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITF 464
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + K+E A +LF + V + + +L+D C+ + A F EM+ GC P
Sbjct: 465 LCEAMKVEKAFLLF-QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSP 523
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y L+ +++ +A+ +F R+ G + + Y L+ LC G+ Q A
Sbjct: 524 SVVTYTALLHAYLKTKQVPQAS----DIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ K++ D G+ P++ +Y A+
Sbjct: 580 CEVYAKMIGT--------------------SDNVGSDFYFEGEHTDSIAPNVVTYGALID 619
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L ++V+ ++LD M + G P+ ++Y+A + K G +D A EV M K ++
Sbjct: 620 GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR-MSKCGYL 678
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
PTV Y L+ + +A+ L +M + C N TY ++DGLCR G +A +
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES-SCTPNVVTYTAMIDGLCRIGECQKALK 737
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+L M R P V TY LI GL GK ++ +MI+Q P+ + L+ + C
Sbjct: 738 LLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI-NHC 796
Query: 485 CNTADLNVCRKTLEQL 500
C L+ L ++
Sbjct: 797 CAAGLLDEAHSLLSEM 812
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 187/448 (41%), Gaps = 30/448 (6%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHIL 137
D+V T I A +EA+S + +C+ ++ TLL +K+ +L I+
Sbjct: 273 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRII 332
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ G + N L+ C R A + M GC P Y+I + +C
Sbjct: 333 SMMMNEGCNPNPSL--FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC 390
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYR--TLLFA--LCDQGKIQDAMQILEKILR 253
+ L L ++ ++ ++ V+ + T FA LC GK A QI++ ++R
Sbjct: 391 SGEELPSPD--LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMR 448
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
KG S ++ C + +E A L E G IP + +Y+ + G I
Sbjct: 449 KGFVPDTSTYSKVITFLC-EAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+ DEM + G PS+V Y A L A K V +A ++ MV P Y+ L
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF-HRMVDAGCAPNTITYSAL 566
Query: 374 LKGLCDAGNSAVAVMYLKKM---SKQVGC------------VANGETYGILVDGLCRDGR 418
+ GLC AG S A KM S VG N TYG L+DGLC+ +
Sbjct: 567 VDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHK 626
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
++A +L+ M P Y+ LI G C +GK A M LP + ++S
Sbjct: 627 VVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTS 686
Query: 479 LVASVCCNTADLNVCRKTLEQL--SSCS 504
L+ ++ L++ K L Q+ SSC+
Sbjct: 687 LIDAM-FKDRRLDLAIKVLSQMLESSCT 713
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 189/463 (40%), Gaps = 38/463 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + ++ K +I M + C S+F + + +Y A A L
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL----------RSCYGWEVKSRIQS 153
++ C +N + + +L + +L L SC V +++ +
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSC----VLNKVNT 423
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N LC + D A + + M +G PD +Y ++ LC ++ +A + +F
Sbjct: 424 ANF-ARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKA----FLLF 478
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ G D+ Y L+ + C G I+ A +++ G +P + L
Sbjct: 479 QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGC-SPSVVTYTALLHAYLK 537
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM----------- 322
+ + A + + + G P+ +YSA+ L G + +V +M
Sbjct: 538 TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597
Query: 323 -----RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
T P++V Y A + L K V +A E+++ G P +Y+ L+ G
Sbjct: 598 YFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGC-EPNHIIYDALIDGF 656
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C G A +MSK G + TY L+D + +D R A +VL +ML S P
Sbjct: 657 CKVGKLDNAQEVFFRMSK-CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V TY +I GLC IG+ +A+ L M + P++ ++SL+
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 201/486 (41%), Gaps = 60/486 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ +I L E+ ++ + + +MK + I ++ + G + +A S F +
Sbjct: 457 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM 516
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++ LL +K ++ A +F R + I + + L+D LC+
Sbjct: 517 ESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI-TYSALVDGLCKAGE 575
Query: 167 SDLALHVFQEM-----------DFQGCY-----PDRESYHILMKGLCNDRRLNEATHLLY 210
S A V+ +M F+G + P+ +Y L+ GLC ++ +A LL
Sbjct: 576 SQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 635
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRIDLC 269
M S G + +IY L+ C GK+ +A ++ ++ + G L + ID
Sbjct: 636 VM----SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM 691
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ D+ A ++++ L P++ +Y+AM L G + K+L M +G P
Sbjct: 692 FKDRRLDL--AIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++V Y + + L K G VD +L++ + + +G P Y +L+ C AG A
Sbjct: 750 NVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC-APNYVTYRVLINHCCAAGLLDEAHSL 808
Query: 390 LKKMSKQV--------------------------------GCVANGETYGILVDGLCRDG 417
L +M + G V+ YG+L+D + G
Sbjct: 809 LSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAG 868
Query: 418 RFLEASRVLEEMLIRSYWPCV---ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R +A + +EM+ S + +TY LI+ LC + +A E+ + +P++S
Sbjct: 869 RLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELS 928
Query: 475 VWSSLV 480
+ L+
Sbjct: 929 AFICLI 934
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/508 (19%), Positives = 200/508 (39%), Gaps = 64/508 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVID 69
T+L + +K +K A +F+E K P+ Y +I + I + + D
Sbjct: 463 TFLCEAMKVEK----AFLLFQEMKSVGVIPDVY----TYTILIDSFCKVGLIEQARSWFD 514
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+M+ C + + Y + Q+ +A +F + C T +++ L+ + K
Sbjct: 515 EMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAG 574
Query: 130 KLEAAHILFLR---------SCYGWE------VKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ + A ++ + S + +E + + + L+D LC+ + A +
Sbjct: 575 ESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELL 634
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M GC P+ Y L+ G C +L+ A + F+R+S+ G + Y +L+ A
Sbjct: 635 DVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV----FFRMSKCGYLPTVHTYTSLIDA 690
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+ ++ A+++L ++L + C GE + A L++ RG P
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE-CQKALKLLSMMEKRGCNP 749
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+++ L G++ ++ +M T+G P+ V Y + G++DEA ++
Sbjct: 750 NVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLL 809
Query: 355 EE--------------------------------EMVKGTFVPTVRVYNILLKGLCDAGN 382
E E+ V VY +L+ AG
Sbjct: 810 SEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGR 869
Query: 383 SAVAVMYLKKMSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
A+ K+M + + + +TY L+ LC + +A + E+ + P +
Sbjct: 870 LEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSA 929
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ LI+GL + K EA+ M +
Sbjct: 930 FICLIKGLIKVNKWNEALQLCYSMCDEG 957
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/486 (17%), Positives = 177/486 (36%), Gaps = 86/486 (17%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R L + +++ ++P ++ F A E+ Y H G Y ++ +L +R
Sbjct: 97 RHRDFLNDAVVVAVLRSVRTPELCVRFFLWA-ERQVGYSHTGACYNALAEVLHFDDRART 155
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ ++ ++ D E + +R R G +A+ L F ++N L++
Sbjct: 156 TERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQ 215
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
VL + D+ V +EM G
Sbjct: 216 ------------------------------------VLATAGQMDMGFRVQKEMSELGFC 239
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
D+ + + LC + R ++A ++ +++ D V+ ++ L + +
Sbjct: 240 TDKFTVGCFAQALCKEGRWSDALVMIEREDFKL-------DTVLCTQMISGLMEASLFDE 292
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ L R R + C IP++ +Y +
Sbjct: 293 AISFLH-------------RMRCNSC-----------------------IPNVVTYRTLL 316
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ ++ +++ M +G P+ ++ + + + A +++ M
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNR-MAGCGC 375
Query: 364 VPTVRVYNILLKGLCDAGN--SAVAVMYLKKMSKQV---GCVANGETYGILVDGLCRDGR 418
P VYNI + +C S + +K+ +++ CV N LC G+
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 435
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
F +A ++++ M+ + + P TY+ +I LC K +A + +EM S +PD+ ++
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495
Query: 479 LVASVC 484
L+ S C
Sbjct: 496 LIDSFC 501
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 180/405 (44%), Gaps = 16/405 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F T I+ G++ EA+ ++ S+ TL+ + K + A + LR
Sbjct: 141 FNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA-LQMLRKI 199
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G VK + N ++D LC+ + A ++ +M + PD ++ L+ G C +L
Sbjct: 200 DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL 259
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA + +F + K D + L+ ALC +G ++ A +L ++++G+
Sbjct: 260 EEA----FGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP---- 311
Query: 263 RHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
+ + DG + AK ++N G P+ SY M + E +
Sbjct: 312 -NVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
++M+ KG P V Y + + L K G + A E+++E G + YN L+ LC
Sbjct: 371 FNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ-PANIFTYNCLIDALC 429
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A+ +KK+ Q G + T+ IL+ GLC+ GR A V +++L + Y
Sbjct: 430 KNHHVDQAIALVKKIKDQ-GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNA 488
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
TYN+++ GLC G EA L +M +PD + +L+ ++
Sbjct: 489 WTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 195/407 (47%), Gaps = 18/407 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-----HIL 137
F I Y ++N A S+ + + T +FNTL+K + K++ A H+L
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
L G+ + S L++ LC+ + AL + +++D + + Y+ ++ LC
Sbjct: 166 AL----GFHLDQF--SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLC 219
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ + +A Y ++ ++ K D+V + L++ C G++++A + +++ K +
Sbjct: 220 KHKLVIDA----YELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C +G +++GAK+++ + G +P++ +YS++ ++ +
Sbjct: 276 PDYYTFNILVDALCKEG-NLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKH 334
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
VL+ + G P+ Y + K MVDEAL + + KG P YN L+ GL
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI-APDKVTYNSLIDGL 393
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C +G + A + +M G AN TY L+D LC++ +A +++++ + P
Sbjct: 394 CKSGRISYAWELVDEMHDN-GQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPD 452
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ T+N+LI GLC +G+ A ++++S+ + ++ +V +C
Sbjct: 453 MYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLC 499
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 197/435 (45%), Gaps = 24/435 (5%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + + ++I L + ++ E D + + T I + G+ A+
Sbjct: 134 YEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTAL 193
Query: 101 SLFKN----LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ + L + N V +NT++ + K + A+ L+ ++ + + +
Sbjct: 194 QMLRKIDGKLVKINVV----MYNTIIDSLCKHKLVIDAYELY-SQMIAKKISPDVVTFSA 248
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L+ C + + A +F+EM + PD +++IL+ LC + L A ++L M
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM--- 305
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG-- 274
++G ++V Y +L+ C ++ A +L I + G AP + + C +G
Sbjct: 306 -KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG-AAPNAHSY----CTMINGFC 359
Query: 275 --EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+ ++ A SL N+ +G P +Y+++ L GRI +++DEM G ++
Sbjct: 360 KIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIF 419
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + AL K+ VD+A+ ++++ +G P + +NIL+ GLC G A +
Sbjct: 420 TYNCLIDALCKNHHVDQAIALVKKIKDQGI-QPDMYTFNILIYGLCKVGRLKNAQDVFQD 478
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ + G N TY I+V+GLC++G F EA +L +M P TY LI+ L
Sbjct: 479 LLSK-GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537
Query: 453 KQYEAVMWLEEMISQ 467
+ +A L EMI++
Sbjct: 538 ENEKAEKLLREMIAR 552
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 8/392 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL-RSCYGWEVKSRIQSL 154
++ VS F +L + + FN +L +VK + + L R + I +
Sbjct: 47 VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N+L++ C + A + ++ G PD +++ L+KGLC + ++ EA H
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF----HD 162
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
+ G D Y TL+ LC G+ + A+Q+L KI K +K + I C
Sbjct: 163 HVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
I+ A L ++ + + P + ++SA+ G++ E + EM K P +
Sbjct: 223 LVID-AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF 281
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ AL K+G + A ++ M +G +P V Y+ L+ G C A L +S
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGV-MPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q+G N +Y +++G C+ EA + +M + P TYN LI GLC G+
Sbjct: 341 -QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRI 399
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A ++EM + +I ++ L+ ++C N
Sbjct: 400 SYAWELVDEMHDNGQPANIFTYNCLIDALCKN 431
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 11/369 (2%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
TAL++ ++ K + N +Y ++I L + + + E+ QM F+
Sbjct: 191 TALQMLRKIDGKL--VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSA 248
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYG 144
I + GQL EA LF+ + N +FN L+ + KE L+ A ++L + G
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEG 308
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
V + + + LMD C + + A HV + G P+ SY ++ G C + ++E
Sbjct: 309 --VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDE 366
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A S+F + KG D V Y +L+ LC G+I A ++++++ G A +
Sbjct: 367 AL----SLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYN 422
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C + ++ A +L+ + +G P + +++ + L GR+ V ++ +
Sbjct: 423 CLIDALCKN-HHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG+ + Y + L K+G+ DEA E + +M +P Y L++ L +
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEA-EALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540
Query: 385 VAVMYLKKM 393
A L++M
Sbjct: 541 KAEKLLREM 549
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 200/483 (41%), Gaps = 59/483 (12%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+P +RH +Y L + + EV+ M + +A G+L
Sbjct: 127 FPKFRHFMRLYIVSATALIGNKNLERANEVMQCM---------------VMNFAENGKLK 171
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EAV++ + V TQ+ N +L V +E A +F+ C V S L+
Sbjct: 172 EAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG-VSPDCVSFKLM 230
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
+ C R A M +G D + +++ C +N FW++
Sbjct: 231 VVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV----GYFWKMV 286
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPC--- 271
+ G +++ + L+ LC QG I+ A ++LE+++R+G K P H ID LC
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK-PNVYTHTTLIDGLCKKGWT 345
Query: 272 ------------NDG--EDIEGAKSLIN-----------EALI-----RGGIPSLASYSA 301
+DG ++ ++IN E L+ +G +P+ +Y+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ G V +++D M +GF P++ Y A + L K G +DEA ++ + V G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
V Y IL+ C ++ ++++ KM K VG + +Y L+ CR + E
Sbjct: 466 LQADGV-TYTILMSVHCRQADTNRSLVFFNKMLK-VGFTPDIHSYTTLISXFCRQKQMKE 523
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ R+ EE + P +TY +I G C G AV + M + PD + +L++
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALIS 583
Query: 482 SVC 484
+C
Sbjct: 584 GLC 586
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 17/288 (5%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+MF + Q+G D V ++ ++ A C+ G++ +A + L ++ +G +D
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFI--------VDNAT 261
Query: 271 CNDGEDIEGAKSLINEA------LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
C D K +N ++ G+ P++ +++A+ L +G I + ++L+EM
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G+ P++ + + L K G ++A + + + + P V Y ++ G C
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A M L +M +Q G V N TY L+DG C+ G F+ A +++ M + P + TYN
Sbjct: 382 NRAEMLLSRMQEQ-GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
+I GLC G EA L + +S L V +++ SV C AD N
Sbjct: 441 IIDGLCKKGSLDEAYRLLNK-VSVHGLQADGVTYTILMSVHCRQADTN 487
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 190/452 (42%), Gaps = 51/452 (11%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF----NCVNWT 115
R+ E ++ ++ M ++ I + + G +N V F + + N +N+T
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
N L K+ + E + R GW K + + L+D LC+ ++ A +F
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRR---GW--KPNVYTHTTLIDGLCKKGWTEKAFRLFL 353
Query: 176 EMDFQGCY-PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++ Y P+ +Y ++ G C + +LN A LL R+ ++G + Y TL+
Sbjct: 354 KLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLS----RMQEQGLVPNTNTYTTLIDG 409
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C G A ++++ + ++G + I C G ++ A L+N+ + G
Sbjct: 410 HCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG-SLDEAYRLLNKVSVHGLQA 468
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+Y+ + + ++M GF P + Y ++ + + E+ +
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLF 528
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EE + G +PT + Y ++ G C GN+++AV ++MS GC + TYG L+ GLC
Sbjct: 529 EEAVSLG-LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNH-GCAPDSITYGALISGLC 586
Query: 415 RDGRFLEASRVLEEMLIRSYWPC--------------------------------VETYN 442
++ + +A + + M+ + PC + T N
Sbjct: 587 KESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVN 646
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
L+R LCS GK A ++ +++ K P+++
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKLLD--KEPNVN 676
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 35/283 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L + K+ A ++F + + Y+ N Y +MI + +++ +
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLV-RSDGYKPNVHTYTAMINGYCKEDKLNRAE 385
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ + + T I + + G A L + + ++N ++ +
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 126 VKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K+ L+ A+ L + S +G + + +LM V C+ ++ +L F +M G P
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADG--VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503
Query: 185 DRESYHILMKGLCNDRRLNEA-------------------------------THLLYSMF 213
D SY L+ C +++ E+ T L +F
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
R+S G D + Y L+ LC + K+ DA + + ++ KGL
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+ N Y ++I L + + E +++++ + + + + R N ++
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
F + + S+ TL+ ++ +++ + LF + + ++ ++ ++
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTK-KTYTSMICG 549
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ + LA+ +FQ M GC PD +Y L+ GLC + +L++A +L +M KG
Sbjct: 550 YCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMM----DKG 605
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
V TL + C + A+ +L+++ ++
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKR 639
>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S LL D LC+ R A+ V + M G PD +Y L+ LC + A L+
Sbjct: 108 HSTQLLYD-LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEK 166
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G + V Y L+ LC G + ++Q +E++++KGL AP + + L
Sbjct: 167 M----EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL-APNAFTYSFLLEAA 221
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
+ A L++E +++GG P+L SY+ + EGR + + E+ KGF ++
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y L L DG +EA ++ EM G P+V YNIL+ L G + A+ LK
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLL-AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 392 KMSK---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+MSK Q A +Y ++ LC++G+ + L+EM+ R P TYN I L
Sbjct: 341 EMSKGNHQFRVTAT--SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSL 397
Query: 449 CSIG-KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C K EA ++ + ++ K + S++ S+C
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC 434
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 201/450 (44%), Gaps = 53/450 (11%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSR 150
+A +L +A+ + + + + ++ L+ ++ K + A L + +G+ S
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY--PSN 175
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ N L+ LC + +L + + +G P+ +Y L++ +R +EA LL
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL- 234
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
I KG ++V Y LL C +G+ DAM + ++ KG KA + + C
Sbjct: 235 ---DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 271 CNDGEDIEGAKSLINEALIRGG--IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-- 326
C DG E A SL+ E + GG PS+ +Y+ + L GR + +VL EM +KG
Sbjct: 292 CCDGR-WEEANSLLAE--MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNH 347
Query: 327 -FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK------GTFVP-------------- 365
F + Y +A L K+G VD ++ ++E + + GT+
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEA 407
Query: 366 --------------TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
T Y ++ LC GN+ A L +M++ G + TY L+
Sbjct: 408 FYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR-CGFDPDAHTYSALIR 466
Query: 412 GLCRDGRFLEASRVLEEML-IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GLC +G F A VL M + P V+ +N +I GLC I + A+ E M+ + ++
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P+ + ++ LV + + +L + ++ L++L
Sbjct: 527 PNETTYAILVEGI-AHEDELELAKEVLDEL 555
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 182/409 (44%), Gaps = 13/409 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+ Y ++ L + + +++++M+ + +R G LN+++
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 199
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ L Q +++ LL+ KE EA +L G E + S N+L+ C
Sbjct: 200 ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE--PNLVSYNVLLTGFC 257
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R+D A+ +F+E+ +G + SY+IL++ LC D R EA LL M
Sbjct: 258 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM----DGGDRA 313
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKG---LKAPKSRRHRIDLCPCNDGEDIEG 279
+V Y L+ +L G+ + A+Q+L K + KG + + + + C +G+ ++
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVL-KEMSKGNHQFRVTATSYNPVIARLCKEGK-VDL 371
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
++E + R P+ +Y+A+ + ++ E ++ + K + Y++ +
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT 431
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L + G A +++ E M + F P Y+ L++GLC G A+ L M + C
Sbjct: 432 SLCRKGNTFAAFQLLYE-MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC 490
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + ++ GLC+ R A V E M+ + P TY +L+ G+
Sbjct: 491 KPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIP 294
D+ + D+ LE ++ G K + ++ DLC N ++ A +I + G IP
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR---LKKAIRVIELMVSSGIIP 139
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++Y+ + L G + +++++M G+ + V Y A + L G ++++L+ +
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 199
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E M KG P Y+ LL+ + AV L ++ + G N +Y +L+ G C
Sbjct: 200 ERLMQKG-LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK-GGEPNLVSYNVLLTGFC 257
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++GR +A + E+ + + V +YN+L+R LC G+ EA L EM + P +
Sbjct: 258 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV 317
Query: 475 VWSSLVASV 483
++ L+ S+
Sbjct: 318 TYNILINSL 326
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 108/202 (53%), Gaps = 3/202 (1%)
Query: 286 EALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E+L+ GG P++A + + DL R+ + +V++ M + G P Y + L K
Sbjct: 95 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V A++++E+ G TV YN L++GLC G+ ++ +++++ Q G N
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTV-TYNALVRGLCMLGSLNQSLQFVERL-MQKGLAPNAF 212
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L++ ++ EA ++L+E++++ P + +YNVL+ G C G+ +A+ E+
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 465 ISQAKLPDISVWSSLVASVCCN 486
++ ++ ++ L+ +CC+
Sbjct: 273 PAKGFKANVVSYNILLRCLCCD 294
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 52 IGILSESN-RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
IG L E N ++ E +I + C + + I + R G A L +++
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+++ L++ + E A + K + + N ++ LC+ RR+DLA
Sbjct: 454 FDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLA 513
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+ VF+ M + P+ +Y IL++G+ ++ L A +L + R
Sbjct: 514 MEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 214/491 (43%), Gaps = 46/491 (9%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
++ FK A K +++H+ Y ++I L ES + EM I M C + ++ +
Sbjct: 108 IQFFKWAG-KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEIL 166
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ +A +N+A+S+F + C +NTL+ ++ E E H L+ C
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNC 226
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVF--------------------------------- 174
+ + L+ + R D A +F
Sbjct: 227 SPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALR 286
Query: 175 --QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+EM +GC P +Y L+KGL R+++A YS+F+ + + G D+V+ L+
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDA----YSLFFNMLKDGCKPDVVLINNLI 342
Query: 233 FALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
L G+++DA+++ K+ L+ AP + + + + +L E +
Sbjct: 343 NILGRAGRLEDALKLFGKM--DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 292 GI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
GI PS +Y+ + R+ + +L+EM KGF P Y + + +L + + A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E+ +E + + + RVY +++K + G + AV +M K++GC + TY L+
Sbjct: 461 NELFQE-LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM-KKLGCSPDVYTYNALM 518
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G+ R G EA ++ M P ++++N+++ GL G A+ +M +
Sbjct: 519 SGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIM 578
Query: 471 PDISVWSSLVA 481
PD ++++++
Sbjct: 579 PDAVSYNTILS 589
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 7/312 (2%)
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
Q+M C + ++K L + +N+A S+F++I + +Y TL+
Sbjct: 146 TIQDMIRSPCSVGPAEWSEILKILGKAKMVNKA----LSVFYQIKGRKCNPTATVYNTLI 201
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
L +G + ++ +I +G +P + + + E + A L +E G
Sbjct: 202 LMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGL 261
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ Y+ + + ++ ++++EM+ KG P++ Y + L K G VD+A
Sbjct: 262 HPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYS 321
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ M+K P V + N L+ L AG A+ KM + C N TY ++
Sbjct: 322 LFFN-MLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMD-SLQCAPNVVTYNTVIKA 379
Query: 413 LCRD-GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ EA+ E+M P TY +LI G C + +A++ LEEM + P
Sbjct: 380 IFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Query: 472 DISVWSSLVASV 483
+ + SL+ S+
Sbjct: 440 CPAAYCSLIDSL 451
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 123/334 (36%), Gaps = 35/334 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ + + M D C+ + I RAG+L +A+ LF +
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++NT++K + + + L+ + + +L+D C+ R
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL----------------- 209
+ AL + +EMD +G P +Y L+ L +R A L
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAV 481
Query: 210 --------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+F + + G D+ Y L+ + G I +A ++ + G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + H I L + A + + +P SY+ + L G
Sbjct: 542 C-TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
K++ EM+ KGF + Y + L A+ G VDE
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAV---GKVDE 631
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++F+E KE R + VYA MI R+++ ++ +MK C +
Sbjct: 460 ANELFQELKENCG--RSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNAL 517
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ RAG ++EA SL +N+ + C +S N +L + K + A +F + E
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES-E 576
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ S N ++ L + ++A + +EM +G D +Y +++ +
Sbjct: 577 IMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 42/459 (9%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++I+ G C + T I Y + G + A +FK L + ++F T++
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284
Query: 125 MVKESKLEAAHIL--------------FL--------RSCY--------GW----EVKSR 150
KE A+ L FL R Y GW + K
Sbjct: 285 FCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPD 344
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N+L++ LC+ + ++A+ E +G P+ SY L++ C + + A+ LL
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M +++G DIV Y L+ L G + DA+ + K++ +G+ + + +
Sbjct: 405 QM----AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G + AK L +E L R +P Y+ + G E KV KG
Sbjct: 461 CKTGRFLP-AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V + A + + GM+DEAL + M + VP Y+ ++ G + A A+
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNR-MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ M K C N TY L++G C G F A +EM +R P V TY LIR L
Sbjct: 579 RYMEKN-KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 451 IGKQYE-AVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
E AV + E M++ +P+ ++ L+ T+
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 193/498 (38%), Gaps = 111/498 (22%)
Query: 34 AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
+ EK + NG +S + +L+ E+++V+ ++ ++ + + + YA +
Sbjct: 88 SSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAES 147
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G L++AV ++ + + ++ + +
Sbjct: 148 GSLSKAVEIYDYVVEL-----------------------------------YDSVPDVIA 172
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+ +L + RR A V+ EM +G D S IL+KG+CN+ ++ E L
Sbjct: 173 CNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKV-EVGRKLIEGR 231
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
W KG +IV Y T++ C G
Sbjct: 232 W---GKGCIPNIVFYNTIIGGYCKLG---------------------------------- 254
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
DIE A + E ++G +P+L ++ M EG V D++L E++ +G S+
Sbjct: 255 --DIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ A ++ G + E I ++ P V YNIL+ LC G VAV +L +
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGW-IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEA 371
Query: 394 SK----------------------------------QVGCVANGETYGILVDGLCRDGRF 419
SK + GC + TYGIL+ GL G
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+A + +++ R P YN+L+ GLC G+ A + EM+ + LPD V+++L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 480 VASVCCNTADLNVCRKTL 497
+ + D + RK
Sbjct: 492 IDGF-IRSGDFDEARKVF 508
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 151/384 (39%), Gaps = 21/384 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+A I+ Y ++ + + A L +++ C ++ L+ +V ++ A + ++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK-L 441
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V N+LM LC+ R A +F EM + PD Y L+ G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+EA +F +KG D+V + ++ C G + +A+ + ++ + L P
Sbjct: 502 DEAR----KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL-VPDKF 556
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + +D+ A + P++ +Y+++ +G ++ EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC---- 378
+ + P++V Y + +L K+ E E M+ VP +N LL+G
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 379 ----------DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+ G S++ + +M K G + Y + LC G A ++
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRM-KSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735
Query: 429 MLIRSYWPCVETYNVLIRGLCSIG 452
M+ + + P ++ ++ G C +G
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVG 759
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 117/306 (38%), Gaps = 20/306 (6%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
+ G+ A LF + N + + TL+ ++ + A +F S VK +
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG-VKVDV 520
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
N ++ C+ D AL M+ + PD+ +Y ++ G + + A +
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI--- 577
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
F + + ++V Y +L+ C QG + A + +++ + L +
Sbjct: 578 -FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 272 NDGEDIEGA----------KSLINEA----LIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ +E A K + NE L++G + + D N G+ +
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
M++ G+ Y + L L GMV A + +++MVK F P + +L G
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC-MFQDKMVKKGFSPDPVSFAAILHGF 755
Query: 378 CDAGNS 383
C GNS
Sbjct: 756 CVVGNS 761
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 45/367 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N+L+ LC R A +F EM PD +Y I++ G C L A LL M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
R G + V Y +++ LCD+G++ DA++++E ++ G+ + + C
Sbjct: 312 AAR----GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G D+ A++ +E RG +Y+A+ L G + E ++VL EM KG V
Sbjct: 368 KG-DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K G + EA ++ +MV+ P V Y L GLC G+ A L +
Sbjct: 427 TYTVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASR---------------------------- 424
M + G N TY L++GLC+ G +A R
Sbjct: 486 MCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544
Query: 425 -------VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+L+EML + P + TYNVL+ G C G+ LE M+ + P+ + ++
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604
Query: 478 SLVASVC 484
SL+ C
Sbjct: 605 SLMKQYC 611
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 19/327 (5%)
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRE--SYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
VLC+ D A+ +FQE+ P++ SY+IL+K LC R+ +A L M
Sbjct: 232 VLCRLPL-DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEM----- 279
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
S D+V Y ++ C +++ A+++L ++ +GL+ + C++G+ +
Sbjct: 280 --ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQ-V 336
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A ++ + ++ G + A ++ + +G + DEM+ +G V Y A
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L + G + EA V++E KG V V Y +L+ G C G A + KM Q
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNKMV-QK 454
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
N TY L DGLC+ G A+ +L EM + + TYN LI GLC G +A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ + +M PD+ +++++ ++C
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALC 541
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 197/461 (42%), Gaps = 31/461 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FAT 85
A+++F+E EK N Y ++ L + RI + ++ D+M D V +
Sbjct: 241 AVQLFQELPEK------NTCSYNILLKALCTAGRIKDAHQLFDEMASPP----DVVTYGI 290
Query: 86 AIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ Y +L A+ L ++ + N V +T L E + + +
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM-- 348
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLAL--HVFQEMDFQGCYPDRESYHILMKGLCND 199
+G + + + +M C R+ DLA + F EM +G D +Y L+ GLC
Sbjct: 349 -HGVVLDAAV--FTTVMSGFC--RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
L EA +L M KG D V Y L+ C GK+ +A + K+++K +
Sbjct: 404 GELKEAERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ C G D+ A L++E +G ++ +Y+++ L G + + + +
Sbjct: 460 VVTYTALSDGLCKQG-DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M G P + Y + AL + +D A +++E + KG PT+ YN+L+ G C
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLMNGFCM 577
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+G L+ M ++ N TY L+ C + + + + ML + P
Sbjct: 578 SGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TYN+LI+G C EA+ + EMI + S +++L+
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 177/406 (43%), Gaps = 22/406 (5%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M E + + I GQ+++AV + +++ V F T++
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLN-----LLMDVLCQCRRSDLALHVFQEMDFQ 180
++ L AA F E++ R + + L++ LC+ A V QEM+ +
Sbjct: 366 CRKGDLAAARNWF------DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
G D +Y +L+ G C ++ EA + + ++ QK ++V Y L LC QG
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEA----FLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASY 299
+ A ++L ++ KGL+ + + C G + +++I+ + G+ P + +Y
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID--MDEAGLKPDVYTY 533
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + L + +L EM KG P++V Y + G V+ ++E M+
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW-ML 592
Query: 360 KGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
+ P YN L+K C N + +Y +S++V V N TY IL+ G C+
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV--VPNENTYNILIKGHCKARN 650
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
EA EM+ + + +YN LIR L K EA E+M
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 42/359 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G Y ++I L + + E + V+ +M+ + + I Y + G++ EA +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLC 162
+ Q ++ L + K+ + AA+ L C G E+ I + N L++ LC
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN--IFTYNSLINGLC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ +MD G PD +Y ++ LC + L+ A LL M KG
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML----DKGIK 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------------------------ 258
IV Y L+ C G+++ ++LE +L K +
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 259 ----------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
P + I + +++ A +E + +G + +SY+A+ L
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNK 682
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ + E ++ ++MR + +Y + F + ++ L + +E+V+ T V ++
Sbjct: 683 KKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALC-DELVEVTLVKSI 740
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 207/468 (44%), Gaps = 59/468 (12%)
Query: 9 LTPTYLSQIIKKQKSP-LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++ + + Q++K+ + + A FK AK + YRH+ Y SM+ IL + + M E+
Sbjct: 117 VSESLVEQVLKRFSNDWIPAFGFFKWAKAQ-TGYRHSMNSYNSMVDILGKLKKFDLMWEL 175
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+++M + +R ARA + +A+ F+ + +F T + NTL+ +VK
Sbjct: 176 VEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVK 235
Query: 128 ESKLEAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
E+ +E A+ +F+ E K I + N+L+ C+ R+ D AL EM G
Sbjct: 236 ENSVEHANDVFV------EFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFC 289
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY +++ C ++ + +L M +KG ++V Y ++ AL +I
Sbjct: 290 PDVISYTSIVEAYCREKDFRKVNSVLNEM----EEKGCPPNVVTYTIVMHALGKGKEISK 345
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++ EK+ KG C +P + YS++
Sbjct: 346 ALEVYEKM--KG-------------SSC---------------------VPDTSFYSSLI 369
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L GR+ + V ++M +G P ++ Y ++A ++AL+++ +M + +
Sbjct: 370 YILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLL-LKMEESSC 428
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + Y+ LLK C V L M K + G TY +LV GLC+ G+ A
Sbjct: 429 KPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVG-TYSLLVHGLCKSGKLEHAC 487
Query: 424 RVLEEMLIRSYWP--CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
EEM+ + P C + S+ + E V E+++SQA+
Sbjct: 488 LFFEEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERV---EKLMSQAR 532
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 149/360 (41%), Gaps = 45/360 (12%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + S N ++D+L + ++ DL + +EMD G Y + +M+ L R +A
Sbjct: 150 RHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIE 209
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
M + G +D + TL+ AL + ++ A + + L P + I
Sbjct: 210 AFRGM----ERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIH 265
Query: 268 -LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C ++ A + E G P + SY+++ E + + VL+EM KG
Sbjct: 266 GWCK---ARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKG 322
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V Y + AL K + +ALEV E+ M + VP Y+ L+ L AG A
Sbjct: 323 CPPNVVTYTIVMHALGKGKEISKALEVYEK-MKGSSCVPDTSFYSSLIYILSKAGRLKDA 381
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY----- 441
+ M+KQ G + + TY ++ C + +A ++L +M S P + TY
Sbjct: 382 RDVFEDMTKQ-GAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLK 440
Query: 442 ------------------------------NVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
++L+ GLC GK A ++ EEM+S+ +P
Sbjct: 441 MCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+D AL+ + E M + F P V Y +++ C + L +M ++ GC N TY
Sbjct: 273 MDNALKSMAE-MKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK-GCPPNVVTY 330
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++ L + +A V E+M S P Y+ LI L G+ +A E+M
Sbjct: 331 TIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTK 390
Query: 467 QAKLPDISVWSSLVASVCCNTADLNVCRKTLE-QLSSC 503
Q +PD+ +++++++ C ++ + + + L+ + SSC
Sbjct: 391 QGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSC 428
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 194/444 (43%), Gaps = 12/444 (2%)
Query: 42 RHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
RH P+ + ++G L + + + QM E + I + GQ+ +
Sbjct: 5 RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
SL + + T ++ TL+K + + +++ + F ++ S L++
Sbjct: 65 FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKL-LHFHDKVVAQAFQTNQVSYGTLLN 123
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ + + ++ + P+ Y ++ GLC D+ +NEA Y ++ + +
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEA----YDLYSEMDAR 179
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+++ Y TL+ A C G++ A +L +++ K + + C +G++
Sbjct: 180 EIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--- 236
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK + + + G P++ SY+ M L R+ E +L EM K P V Y + +
Sbjct: 237 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 296
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G + AL ++ E +G V Y LL LC N A KM K+ G
Sbjct: 297 GLCKSGRITSALNLMNEMHHRGQPADVV-TYTSLLDALCKNQNLDKATALFMKM-KERGI 354
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
TY L+DGLC+ GR A + + +L++ V TY V+I GLC G EA+
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414
Query: 460 WLEEMISQAKLPDISVWSSLVASV 483
+M +P+ + ++ S+
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSL 438
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 16/357 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TLL + K + A I LR + + + ++D LC+ + + A ++ E
Sbjct: 117 SYGTLLNGLCKTGETRCA-IKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSE 175
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
MD + +P+ +Y+ L+ C +L A LL+ M K D+ + L+ ALC
Sbjct: 176 MDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL----KNINPDVYTFSILIDALC 231
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLINEALIRGGI 293
+GK +A QI +++ G+ P + I LC C + ++ A +L+ E L + +
Sbjct: 232 KEGK--NAKQIFHAMVQMGVN-PNVYSYNIMINGLCKC---KRVDEAMNLLREMLHKNMV 285
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P +Y+++ L GRI +++EM +G +V Y + L AL K+ +D+A +
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 345
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ +G PT+ Y L+ GLC G A + + + GC + TY +++ GL
Sbjct: 346 FMKMKERG-IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK-GCCIDVWTYTVMISGL 403
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
C++G F EA + +M P T+ ++IR L + +A L EMI++ L
Sbjct: 404 CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 161/338 (47%), Gaps = 9/338 (2%)
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
S I N ++ L + + + + ++MD +G + + IL+ C+ ++ +
Sbjct: 8 SPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS--- 64
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+S+ +I + G + + + TL+ LC +G+++ + +K++ + + + +
Sbjct: 65 -FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE A L+ R P++ YSA+ L + + E + EM + +
Sbjct: 124 GLCKTGET-RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+++ Y + A G + A ++ E ++K P V ++IL+ LC G +A +
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILK-NINPDVYTFSILIDALCKEGKNAKQIF 241
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ Q+G N +Y I+++GLC+ R EA +L EML ++ P TYN LI GL
Sbjct: 242 H---AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C G+ A+ + EM + + D+ ++SL+ ++C N
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 336
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 10/335 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+ + +++ + R N +Y+++I L + + E ++ +M + T
Sbjct: 134 AIKLLRMIEDR--STRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTL 191
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + AGQL A SL + N +F+ L+ + KE K A I G
Sbjct: 192 ICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK-NAKQIFHAMVQMG-- 248
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + S N++++ LC+C+R D A+++ +EM + PD +Y+ L+ GLC R+ A
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 308
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+L+ M R G D+V Y +LL ALC + A + K+ +G++ P +
Sbjct: 309 NLMNEMHHR----GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ-PTMYTYTA 363
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ G ++ A+ L L++G + +Y+ M L EG E + +M G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
P+ V +E + +LF+ D+A +++ E + KG
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 9/338 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + +L++L++ C + + + ++ G P+ ++ LMKGLC + +
Sbjct: 41 IEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLL 100
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
H ++ + + V Y TLL LC G+ + A+++L I + + I
Sbjct: 101 HF----HDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAI 156
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D + + A L +E R P++ +Y+ + G+++ +L EM K
Sbjct: 157 IDGLCKD-KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P + + + AL K+G + + I MV+ P V YNI++ GLC A
Sbjct: 216 INPDVYTFSILIDALCKEG---KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ L++M + V + TY L+DGLC+ GR A ++ EM R V TY L+
Sbjct: 273 MNLLREMLHK-NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC +A +M + P + +++L+ +C
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 369
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 185/450 (41%), Gaps = 54/450 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECK-----DSV-FATAIRTYARAGQLNEAV 100
+ +I L + RI + EV ++MKG+ E K D++ + T I + G+ EA+
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + C T +FN L+ + ++E AH LF +++ + +LN L+D
Sbjct: 249 CLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLF-NEMENAQIEPNVITLNTLVDG 307
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+C+ R A+ F+ M +G + +Y + + CN +N+A L M S+ G
Sbjct: 308 MCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM----SKDG 363
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D V+Y TL+ L G++ DA ++ K+ G C D
Sbjct: 364 CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGF--------------CLD------- 402
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
Y+ + + + ++ + L+EM G P V Y ++
Sbjct: 403 ---------------RVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISY 447
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K G A + +++ + PTV Y L+ C N A+ K+M+ V
Sbjct: 448 FSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKV 507
Query: 401 A-NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N Y IL+D LC+ + A +L++M R P TYN + + L +A
Sbjct: 508 PPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFK 567
Query: 460 WLEEMISQAKLPD------ISVWSSLVASV 483
++ M+ QA PD ++ W S V +
Sbjct: 568 LMDRMVEQACNPDYITMEILTEWLSAVGEI 597
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 201/494 (40%), Gaps = 54/494 (10%)
Query: 36 EKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKG-DSCECKDSVFATAI------R 88
E PN + G V+ +++ I R+ E D++ G S K ++F I
Sbjct: 71 EFRPNDKTAGIVFNNLLKIDGLEGRVKE-----DEIAGLVSKFGKHNIFPDTIALTQLIS 125
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVK 148
R+G N A ++ NL N + N LL + K + ++L +R ++
Sbjct: 126 KLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLL-MRKMKDMNIQ 184
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG------CYPDRESYHILMKGLCNDRRL 202
+ + +L++ LC+ RR D AL VF++M + PD Y+ L+ GLC R
Sbjct: 185 PTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQ 244
Query: 203 NEATHLL-------------------------------YSMFWRISQKGSGEDIVIYRTL 231
EA L+ + +F + +++ TL
Sbjct: 245 EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ +C +I A++ + +KGLK CN ++ A ++E G
Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCN-VNNMNKAMEFLDEMSKDG 363
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P Y + L GR+ + V+ +++ GF V Y ++ K +D A
Sbjct: 364 CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQ 423
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E + E + G P YN L+ GN +A ++KKM+++ G TYG L+
Sbjct: 424 EWLNEMELAGV-KPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIH 482
Query: 412 GLCRDGRFLEASRVLEEM--LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
C + EA ++ +EM + P YN+LI LC + A+ L++M +
Sbjct: 483 AYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGV 542
Query: 470 LPDISVWSSLVASV 483
+P+ + ++S+ ++
Sbjct: 543 MPNTTTYNSIFKAL 556
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 131/331 (39%), Gaps = 42/331 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L + K TA++ F+ ++K + N Y I N + +
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQK--GLKGNNVTYTVFINAFCNVNNMNKAM 353
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E +D+M D C V+ T I A+AG+L++A S+
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVV---------------------- 391
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
SKL+ A R CY N+L+ C+ + D A EM+ G PD
Sbjct: 392 ---SKLKEAGFCLDRVCY-----------NVLISEFCKKNKLDRAQEWLNEMELAGVKPD 437
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ L+ A + M ++G + Y L+ A C I +A+
Sbjct: 438 SVTYNTLISYFSKIGNFKLAHKFMKKM---TEEEGLSPTVFTYGALIHAYCLNNNIDEAI 494
Query: 246 QILEKILRKGLKAPKSRR-HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+I +++ K P + + I + + A SL+++ RG +P+ +Y+++
Sbjct: 495 KIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFK 554
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
L ++ + + K++D M + P + E
Sbjct: 555 ALRDKNWLDKAFKLMDRMVEQACNPDYITME 585
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMS-----KQVGCVANGETYGILVDGLCRDGRF 419
PTV + IL+ LC A+ +KM +V + Y L+DGLC+ GR
Sbjct: 185 PTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQ 244
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA ++ +M P T+N LI G C G+ A EM + P++ ++L
Sbjct: 245 EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304
Query: 480 VASVC 484
V +C
Sbjct: 305 VDGMC 309
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 14/372 (3%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
++NT++ + ++AA + + + + N L+ LC AL VF +
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVPFAPDT----FTYNPLIRALCVRGCVLDALAVFDD 185
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +GC P +Y IL+ C + +A LL M KG DIV Y L+ A+C
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEM----RSKGCEPDIVTYNVLINAMC 241
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
QG + +A+++L + G K P + + L E E A L+ + P
Sbjct: 242 SQGDVGEALKVLNSLPSYGCK-PDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDE 300
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+++A+ L +G + KVL +M G P ++ Y + + L K+ VDEA+++++E
Sbjct: 301 VTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKE 360
Query: 357 ---EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG- 412
EMV +P +N ++ LC G A+ + +MS+ GC+ + TY +VDG
Sbjct: 361 LLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEH-GCIPDITTYNCIVDGF 419
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+ + EA +L M+ P TY L GL + A+ + + PD
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479
Query: 473 ISVWSSLVASVC 484
++++++ +C
Sbjct: 480 KMLYNAILLGLC 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 172/373 (46%), Gaps = 18/373 (4%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L+ +V+ +L+ A + + S G + N+L+ LC R A V + +
Sbjct: 65 NRRLRGLVQRGELDGA-LRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL- 122
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G +Y+ ++ G C ++ A ++ S+ + D Y L+ ALC +
Sbjct: 123 --GPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF-------APDTFTYNPLIRALCVR 173
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G + DA+ + + +L +G +P + I L + A L++E +G P + +
Sbjct: 174 GCVLDALAVFDDMLHRGC-SPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVT 232
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + + ++G + E KVL+ + + G P V Y L +L +EA +++ + M
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTK-M 291
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
P +N ++ LC G A L +MS+ GC + TY ++DGLC++ R
Sbjct: 292 FSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH-GCTPDIITYSSIMDGLCKERR 350
Query: 419 FLEASRVLEEMLI----RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
EA ++L+E+L ++ P T+N +I LC G A+ ++EM +PDI+
Sbjct: 351 VDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDIT 410
Query: 475 VWSSLVASVCCNT 487
++ +V C +
Sbjct: 411 TYNCIVDGFLCKS 423
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 153/369 (41%), Gaps = 50/369 (13%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++D+M+ CE + I G + EA+ + +L + C ++ +LK +
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLC 276
Query: 127 KESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ E A L F C EV + N ++ LCQ A V +M GC
Sbjct: 277 SSERWEEADKLLTKMFSNDCAPDEV-----TFNAVITSLCQKGFVGRATKVLAQMSEHGC 331
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD +Y +M GLC +RR++EA LL + + K D V + T++ +LC +G
Sbjct: 332 TPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFD 391
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+++++++ G IP + +Y+ +
Sbjct: 392 RAIKVVDEMSEHGC------------------------------------IPDITTYNCI 415
Query: 303 AID--LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+D L + E +L+ M + G P Y++ L ++ ++ A+ +
Sbjct: 416 -VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM 474
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P +YN +L GLC + +A+ + M GC+ + TY ILV+G+ +G
Sbjct: 475 G-LSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSN-GCMPDESTYIILVEGIAYEGFLE 532
Query: 421 EASRVLEEM 429
EA +L +
Sbjct: 533 EAKELLGNL 541
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 171/417 (41%), Gaps = 18/417 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +M+ + I + +ID + + IR G + +A+++F ++
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVPFAP---DTFTYNPLIRALCVRGCVLDALAVFDDM 186
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQC 164
C +++ LL KES + A +L +RS G E I + N+L++ +C
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRS-KGCE--PDIVTYNVLINAMCSQ 243
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
AL V + GC PD +Y ++K LC+ R EA LL MF D
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF----SNDCAPD 299
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND---GEDIEGAK 281
V + ++ +LC +G + A ++L ++ G I C + E I+ K
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLK 359
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA- 340
L+ E + + IP +++ + L +G KV+DEM G P + Y +
Sbjct: 360 ELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGF 419
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K +EAL+++ MV P Y L GL A+ +++ + +G
Sbjct: 420 LCKSCKTEEALDLLNL-MVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV-QAMGLS 477
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ Y ++ GLC+ R A M+ P TY +L+ G+ G EA
Sbjct: 478 PDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 47 VYASMIGILSESNRITE----MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
Y+S++ L + R+ E +KE++ +M +C F T I + + G + A+ +
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKV 396
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKES--KLEAAHILFLRSCYGW-----EVKS------ 149
+S+ C+ ++N ++ + +S EA +L L G KS
Sbjct: 397 VDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLS 456
Query: 150 -------------RIQSLNLLMDV---------LCQCRRSDLALHVFQEMDFQGCYPDRE 187
R+Q++ L D LC+ R+DLA+ F M GC PD
Sbjct: 457 REDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDES 516
Query: 188 SYHILMKGLCNDRRLNEATHLLYSM 212
+Y IL++G+ + L EA LL ++
Sbjct: 517 TYIILVEGIAYEGFLEEAKELLGNL 541
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 15/403 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS---CYGWEVK 148
RAG+ +AV +F +++ + ++NT++ +K LEA LR C+G +K
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG--FRLRDQMVCHG--LK 267
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ N+L+ LC+ R + EM Q PD +Y IL GL N +
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR----NGDSKA 323
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ S+F + + G LL LC GK+ A ++L+ ++ GL + + +
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE +EGA S + R P +Y+A+ L RI +L EM+ G
Sbjct: 384 GYCQTGE-LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ + + A + G +++ ++ EM + P V Y ++ C G AV
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCF-IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L M + + N + Y ++D G +A ++E+M P + TYN+LI+GL
Sbjct: 502 ILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
C+ + EA + + + +PD +++L+ S CC +++
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-SACCYRGNID 602
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 181/427 (42%), Gaps = 10/427 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + R+ E ++D+M ++ +R G +S
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + + + LL + K+ K+ A + V +R+ N L++
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV-IYNTLINGY 385
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ + A F +M + PD +Y+ L+ GLC R+ A LL M G
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM----QDNGV 441
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + TL+ A G+++ +L ++ GLK I C +G+ I A
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK-IPEAV 500
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+++++ + +P+ Y+A+ ID Y E G + ++++M++ G PS+V Y +
Sbjct: 501 AILDDMFHKDVLPNAQVYNAI-IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + EA E+I + +P YN L+ C GN A+ ++M K G
Sbjct: 560 LCNQSQISEAEEIINS-LSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-YGIK 617
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+ GL GR E + ++M+ + P +N+++ G + +A
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 677
Query: 461 LEEMISQ 467
+EM+ +
Sbjct: 678 RKEMLQK 684
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 149/372 (40%), Gaps = 43/372 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S NLL++ L R F + G PD +++ ++ L EA
Sbjct: 129 LSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV---- 184
Query: 211 SMFWRISQKGS-GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R+ + G+ + Y ++ + G+ DA+++ +++ + + P + +
Sbjct: 185 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAV-LPNHITYNTMID 243
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G D+E L ++ + G P+ +Y+ + L GR+ E +LDEM ++ P
Sbjct: 244 GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 303
Query: 330 SLVMY-----------EAK------------------------LAALFKDGMVDEALEVI 354
Y ++K L L KDG V A EV+
Sbjct: 304 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 363
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ +V VPT +YN L+ G C G A +M K + TY L++GLC
Sbjct: 364 -QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALINGLC 421
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R A +L EM P VET+N LI G+ + + L EM P++
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481
Query: 475 VWSSLVASVCCN 486
+ S+V + C N
Sbjct: 482 SYGSIVNAFCKN 493
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +EA R +PSL+S + + L + GR + + + + G P + + A
Sbjct: 118 LADEA--RAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACV 175
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G + EA+ ++ G P YN+++ G+ AG AV +M+++ + N
Sbjct: 176 AAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPN 234
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY ++DG + G R+ ++M+ P TYNVL+ GLC G+ E L+
Sbjct: 235 HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 294
Query: 463 EMISQAKLPDISVWSSLVASVCCN 486
EM SQ +PD +S L + N
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRN 318
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 208/474 (43%), Gaps = 49/474 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVID-QMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+R N V+ ++ L ++ R+ E ++ +M C + T ++ + + EA
Sbjct: 226 WRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEA 285
Query: 100 VSLFKNLSQ---FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ L ++ +C S+NT++ +E +++ A+ LFL+ + + + N
Sbjct: 286 LELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ-MIDRGIPPDVVTYNT 344
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++D LC+ + D A VFQ+M +G P +Y+ L+ G + + E LL M
Sbjct: 345 VIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEM---- 400
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
S D IY LL LC G+ +A I + ++RKG+K P +
Sbjct: 401 STHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIK-PDAM-------------- 445
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG--------------------- 315
I+ A + ++ +G P++ +Y A+ L GR+ +
Sbjct: 446 IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWE 505
Query: 316 --DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
++++ EM +G +V++ + L ++G V EA +IE M++ P V YN L
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL-MLRVGVRPDVISYNTL 564
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G C G + A L M +G N TY L+ G C+ R +A +L EML+
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMV-SIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNG 623
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
P V TYN ++ GL G+ EA MI+ D+ ++ ++ +C N
Sbjct: 624 PTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 194/449 (43%), Gaps = 56/449 (12%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS---FNT 120
++E D++ D C ++ I + R G+L ++F + + W + FN
Sbjct: 184 VRECSDKVAPDRC-----TYSILIGCFCRMGRLEHGFAVFGLILK---TGWRVNHIVFNQ 235
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DF 179
LLK + +L+ A + L + + S N L+ C R++ AL + M D
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295
Query: 180 QG--CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
QG C PD SY+ ++ G + ++++A Y++F ++ +G D+V Y T++ LC
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKA----YNLFLQMIDRGIPPDVVTYNTVIDGLCK 351
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ A + +++L KG+K + + + G+ E + L+ E P
Sbjct: 352 AQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVR-LLEEMSTHDLEPDCF 410
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
Y+ + L GR E + D + KG P D M+DEA+ I ++
Sbjct: 411 IYALLLDYLCKNGRCTEARNIFDSVIRKGIKP--------------DAMIDEAV-CIFDK 455
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY----------- 406
M + P V Y L+ LC G A++ +M +V + E +
Sbjct: 456 MRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEML 515
Query: 407 --GILVD---------GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
GI +D LCR+GR +EA R++E ML P V +YN L+ G C G+
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTD 575
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA L+ M+S P+ +++L+ C
Sbjct: 576 EAAKLLDVMVSIGLKPNEFTYNTLLHGYC 604
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 178/422 (42%), Gaps = 42/422 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+YA ++ L ++ R TE + + D SV I+ A ++EAV +F +
Sbjct: 411 IYALLLDYLCKNGRCTEARNIFD-----------SVIRKGIKPDA---MIDEAVCIFDKM 456
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
Q ++ L+ + K +++ A + F + YG LC
Sbjct: 457 RQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG----------------LCT 500
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A + EM QG D ++ LM LC + R+ EA L+ M + G
Sbjct: 501 VEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML----RVGVRP 556
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D++ Y TL+ C G+ +A ++L+ ++ GLK P + L I+ A SL
Sbjct: 557 DVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK-PNEFTYNTLLHGYCKARRIDDAYSL 615
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV-LDEMRTKGFWPSLVMYEAKLAALF 342
+ E L+ G P + +Y+ + L+ GR E ++ L+ + ++ W + Y L L
Sbjct: 616 LREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW-DMYTYNIILNGLC 674
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+ VDEA ++ + KG + + +NI++ L G A+ +S G V +
Sbjct: 675 KNNCVDEAFKMFQSLCSKGLQLHII-TFNIMIGALLKGGKKEDAMDLFATISA-YGLVPD 732
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
ETY ++ + L ++G E + M P N L+R G A +L
Sbjct: 733 VETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLS 792
Query: 463 EM 464
++
Sbjct: 793 KL 794
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 45/367 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N+L+ LC R A +F EM PD +Y I++ G C L A LL M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ +G + V Y +++ LCD+G++ DA++++E ++ G+ + + C
Sbjct: 312 ----AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G D+ A++ +E RG +Y+A+ L G + E ++VL EM KG V
Sbjct: 368 KG-DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K G + EA ++ +MV+ P V Y L GLC G+ A L +
Sbjct: 427 TYTVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASR---------------------------- 424
M + G N TY L++GLC+ G +A R
Sbjct: 486 MCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544
Query: 425 -------VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+L+EML + P + TYNVL+ G C G+ LE M+ + P+ + ++
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604
Query: 478 SLVASVC 484
SL+ C
Sbjct: 605 SLMKQYC 611
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 19/327 (5%)
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRE--SYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
VLC+ D A+ +FQE+ P++ SY+IL+K LC R+ +A L M
Sbjct: 232 VLCRLPL-DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEM----- 279
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
S D+V Y ++ C +++ A+++L ++ +GL+ + C++G+ +
Sbjct: 280 --ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQ-V 336
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A ++ + ++ G + A ++ + +G + DEM+ +G V Y A
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L + G + EA V++E KG V V Y +L+ G C G A + KM Q
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNKMV-QK 454
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
N TY L DGLC+ G A+ +L EM + + TYN LI GLC G +A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ + +M PD+ +++++ ++C
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALC 541
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 197/466 (42%), Gaps = 41/466 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FAT 85
A+++F+E EK N Y ++ L + RI + ++ D+M D V +
Sbjct: 241 AVQLFQELPEK------NTCSYNILLKALCTAGRIKDAHQLFDEMASPP----DVVTYGI 290
Query: 86 AIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTL-----LKEMVKESKLEAAHI 136
+ Y +L A+ L ++ + N V +T L + + V+ + H
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL--HVFQEMDFQGCYPDRESYHILMK 194
+ L + V S CR+ DLA + F EM +G D +Y L+
Sbjct: 351 VVLDAAVFTTVMSGF------------CRKGDLAAARNWFDEMQKRGLAADGVTYTALIN 398
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC L EA +L M KG D V Y L+ C GK+ +A + K+++K
Sbjct: 399 GLCRAGELKEAERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ + C G D+ A L++E +G ++ +Y+++ L G + +
Sbjct: 455 RVTPNVVTYTALSDGLCKQG-DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ + +M G P + Y + AL + +D A +++E + KG PT+ YN+L+
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLM 572
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C +G L+ M ++ N TY L+ C + + + + ML +
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV 631
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P TYN+LI+G C EA+ + EMI + S +++L+
Sbjct: 632 VPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 174/401 (43%), Gaps = 12/401 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M E + + I GQ+++AV + +++ V F T++
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++ L AA F + + + L++ LC+ A V QEM+ +G D
Sbjct: 366 CRKGDLAAARNWF-DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +L+ G C ++ EA + + ++ QK ++V Y L LC QG + A
Sbjct: 425 AVTYTVLIDGYCKVGKMTEA----FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
++L ++ KGL+ + + C G + +++I+ + G+ P + +Y+ +
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID--MDEAGLKPDVYTYTTIIG 538
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + +L EM KG P++V Y + G V+ ++E M++
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW-MLEKNIH 597
Query: 365 PTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P YN L+K C N + +Y +S++V V N TY IL+ G C+ EA
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV--VPNENTYNILIKGHCKARNMKEAL 655
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
EM+ + + +YN LIR L K EA E+M
Sbjct: 656 YFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 42/359 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G Y ++I L + + E + V+ +M+ + + I Y + G++ EA +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLC 162
+ Q ++ L + K+ + AA+ L C G E+ I + N L++ LC
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN--IFTYNSLINGLC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ +MD G PD +Y ++ LC + L+ A LL M KG
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML----DKGIK 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------------------------ 258
IV Y L+ C G+++ ++LE +L K +
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 259 ----------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
P + I + +++ A +E + +G + +SY+A+ L
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNK 682
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ + E ++ ++MR + +Y + F + ++ L + +E+V+ T V ++
Sbjct: 683 KKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALC-DELVEVTLVKSI 740
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 195/419 (46%), Gaps = 19/419 (4%)
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
MK C C + + I Y + +L +A +F+ + Q C+ S+ L+ + K
Sbjct: 217 MKFGFC-CDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 131 LEAAHILFLR----SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
++ A LF + C+ + + +L+ C+ + AL F+EM G P+
Sbjct: 276 IDEALELFFQMKEDGCF-----PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNV 330
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y +L+ C +++E +L +M +KG +V + L+ C +G ++DA+
Sbjct: 331 YTYTVLIDYFCKVGKMDEGMEMLSTML----EKGLVSSVVPFNALIDGYCKRGMMEDAIC 386
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+L+ ++ P SR + +C + ++ A +L+N+ P+L +Y+ + L
Sbjct: 387 VLDS-MKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445
Query: 307 YNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+ R+V+ L + K GF P + A + L K G V++A +V E K
Sbjct: 446 C-KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+Y L+ G C A + A + K+M + GC N T+ +L+DGL ++G+ +A +
Sbjct: 505 EF-LYTALIDGYCKAEKFSDAHLLFKRMLFE-GCFPNSITFNVLLDGLRKEGKVEDAMSL 562
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ M P V TY +LI + A M+L++MIS P++ +++ + + C
Sbjct: 563 VDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYC 621
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 214/539 (39%), Gaps = 69/539 (12%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P + T T L + ALK F+E E N Y +I + ++ E
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN--GIEPNVYTYTVLIDYFCKVGKMDEG 349
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
E++ M F I Y + G + +A+ + ++ ++++N L+
Sbjct: 350 MEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++ ++ A L L Y ++ + + N L+ LC+ R D A + M G P
Sbjct: 410 FCRKKSMDRAMAL-LNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP 468
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ ++ + LC ++ +A + +F + +K + + +Y L+ C K DA
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQA----HQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ +++L +G P S + L +E A SL++ P++ +Y+ +
Sbjct: 525 HLLFKRMLFEGC-FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIE 583
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI----EEEMVK 360
++ E + LD+M + G P++V Y A + A + G + EA E++ EE ++
Sbjct: 584 EILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643
Query: 361 GTFV------------------------------PTVRVYNILLKGLC-----------D 379
+F+ P+ + Y+ILLK L D
Sbjct: 644 DSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLD 703
Query: 380 AGNSAVAV---------------MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
++ ++V M +KM +Q GCV N TY L+ GLC+ A R
Sbjct: 704 LNSTNISVDNANIWKIADFEIITMLFEKMVEQ-GCVPNVNTYSKLIKGLCKVEHLSLAFR 762
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ M P +N L+ C +G EA+ L+ M+ L + + LV +
Sbjct: 763 LFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 185/435 (42%), Gaps = 54/435 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ + I L + ++ + +V + +K E + ++ I Y +A + ++A LFK +
Sbjct: 472 TFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG-WEVKSRIQSLNLLMDVLCQCR 165
C + +FN LL + KE K+E A + L G ++ K + + +L++ + +
Sbjct: 532 LFEGCFPNSITFNVLLDGLRKEGKVEDA--MSLVDVMGKFDAKPTVHTYTILIEEILRES 589
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D A +M GC P+ +Y +K C RL EA M +I ++G D
Sbjct: 590 DFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAE----EMVVKIKEEGILLDS 645
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
IY L+ A G++ A +L ++ G + P + + I L K LI
Sbjct: 646 FIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCE-PSRQTYSILL------------KHLIF 692
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + G M +DL + V+ + W K+A
Sbjct: 693 EKYNKEG---------MGLDLNSTNISVDNANI---------W--------KIADF---- 722
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
E + ++ E+MV+ VP V Y+ L+KGLC + ++A M K+ G +
Sbjct: 723 ---EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM-KESGISPSENI 778
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ L+ C+ G EA R+L+ M+ ++ +E+Y +L+ GL G Q +A ++
Sbjct: 779 HNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLL 838
Query: 466 SQAKLPDISVWSSLV 480
S D VW L+
Sbjct: 839 SCGYNYDEVVWKVLL 853
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 126/322 (39%), Gaps = 21/322 (6%)
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
F P H + L N+ L+ T L + W Q G + Y+ LLF L
Sbjct: 60 FNTLIPSLTPTH--LSSLFNNPNLHPLTALNF-FKWIHYQHGFIHTVHSYQPLLFILVRN 116
Query: 239 GKIQDAMQILEKILRKGLKAPKSR-------RHRIDLCPCNDGED---------IEGAKS 282
G ++ A + +++ + + ++R H L + I+
Sbjct: 117 GFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNC 176
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + L G P+L S++ M G +V + GF Y + +
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K + +A +V E +G V Y L+ G C+ G A+ +M K+ GC +
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVS-YTNLIHGFCEVGKIDEALELFFQM-KEDGCFPD 294
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY +LV C G+ EA + EEM+ P V TY VLI C +GK E + L
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M+ + + + +++L+ C
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYC 376
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 124/308 (40%), Gaps = 54/308 (17%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y + I R+ E +E++ ++K + ++ + Y GQL+ A +
Sbjct: 609 NVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVL 668
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ C Q+++ LLK ++ E + + G + + S N+ +D
Sbjct: 669 IRMFDTGCEPSRQTYSILLKHLIFEK--------YNKEGMGLD----LNSTNISVDNANI 716
Query: 164 CRRSDLAL--HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +D + +F++M QGC P+ +Y L+KGLC L+ L + +F + + G
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLS----LAFRLFNHMKESGI 772
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
I+ +LL + C G ++A+++L+ ++
Sbjct: 773 SPSENIHNSLLSSCCKLGMHEEALRLLDSMME---------------------------- 804
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ L SY + L+ +G + +++ + + G+ V+++ L L
Sbjct: 805 --------YNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGL 856
Query: 342 FKDGMVDE 349
+ G VDE
Sbjct: 857 VRKGYVDE 864
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 15/403 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS---CYGWEVK 148
RAG+ +AV +F +++ + ++NT++ +K LEA LR C+G +K
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG--FSLRDQMVCHG--LK 263
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ N+L+ LC+ R + EM Q PD +Y IL GL N +
Sbjct: 264 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR----NGDSKA 319
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ S+F + + G LL LC GK+ A ++L+ ++ GL + + +
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE +EGA S + R P +Y+A+ L RI +L EM+ G
Sbjct: 380 GYCQTGE-LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ + + A + G +++ ++ EM + P V Y ++ C G AV
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCF-IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L M + + N + Y ++D G +A ++E+M P + TYN+LI+GL
Sbjct: 498 ILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
C+ + EA + + + +PD +++L+ S CC +++
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-SACCYRGNID 598
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 10/427 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + R+ E ++D+M ++ +R G +S
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + + + LL + K+ K+ A + V +R+ N L++
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV-IYNTLINGY 381
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ + A F +M + PD +Y+ L+ GLC R+ A LL M G
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM----QDNGV 437
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + TL+ A G+++ +L ++ GLK I C +G+ I A
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK-IPEAV 496
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+++++ + +P+ Y+A+ ID Y E G + ++++M++ G PS+V Y +
Sbjct: 497 AILDDMFHKDVLPNAQVYNAI-IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + EA E+I + +P YN L+ C GN A+ ++M K G
Sbjct: 556 LCNQSQISEAEEIINS-LSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-YGIK 613
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+ GL GR +E + ++M+ + P +N+++ G + +A
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 673
Query: 461 LEEMISQ 467
+EM+ +
Sbjct: 674 RKEMLQK 680
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-- 270
F ++ G+ D + + A G + +A+ +L ++ R G P + + + +
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207
Query: 271 -CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G D A + +E R +P+ +Y+ M G + G + D+M G P
Sbjct: 208 RAGRGGD---AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKP 264
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ + Y L+ L + G + E +++E M VP Y+IL GL G+S A++
Sbjct: 265 NAITYNVLLSGLCRAGRMGETSALLDE-MASQKMVPDGFTYSILFDGLSRNGDSK-AMLS 322
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
L S + G T IL++GLC+DG+ A VL+ ++ P YN LI G C
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 382
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ A +M S+ PD +++L+ +C
Sbjct: 383 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 150/372 (40%), Gaps = 43/372 (11%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S NLL++ L R F + G PD +++ ++ L EA
Sbjct: 125 LSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV---- 180
Query: 211 SMFWRISQKGS-GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R+ + G+ + Y ++ + G+ DA+++ +++ + + P + +
Sbjct: 181 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAV-LPNHITYNTMID 239
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G D+E SL ++ + G P+ +Y+ + L GR+ E +LDEM ++ P
Sbjct: 240 GHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 299
Query: 330 SLVMY-----------EAK------------------------LAALFKDGMVDEALEVI 354
Y ++K L L KDG V A EV+
Sbjct: 300 DGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 359
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ +V VPT +YN L+ G C G A +M K + TY L++GLC
Sbjct: 360 -QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM-KSRHIKPDHITYNALINGLC 417
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R A +L EM P VET+N LI G+ + + L EM P++
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477
Query: 475 VWSSLVASVCCN 486
+ S+V + C N
Sbjct: 478 SYGSIVNAFCKN 489
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 43/436 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIR-TYARAGQLNEAVSLFKNL 106
Y +I ++ +S R T+ ++ DQM S ++ F + + + A AG L+ A +L
Sbjct: 130 YRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKA 189
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQF C ++N L+ + +++ A LF G + S N+++ +C+
Sbjct: 190 SQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGD 249
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG-SGEDI 225
AL + + MD GC PD +++IL+ GLC + +++ +L R+ + G ++
Sbjct: 250 VQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLR----RLQRDGVCMPNV 305
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y +++ C G+++DAM + N
Sbjct: 306 VTYTSVISGYCKAGRMEDAMAVY------------------------------------N 329
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + G P++ +Y+ + G + V +M + P +V + + + + G
Sbjct: 330 DMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCG 389
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+D+A++ I EM + P + I++ C S A+ +LKKM+ +
Sbjct: 390 QLDDAMK-IWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFI 448
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++D LC+ G+ EA+ +L EM + P TY +LI G C G+ EAV + +M+
Sbjct: 449 YNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMV 508
Query: 466 SQAKLPDISVWSSLVA 481
PD V +S ++
Sbjct: 509 ETGCSPDSIVVNSFIS 524
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 154/335 (45%), Gaps = 7/335 (2%)
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
S ++ ++CQ R AL +F +M Q Y + + G C L +A L S
Sbjct: 128 HSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLS 187
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
+ SQ G + Y L+ G++QDA+ + E ++ G+ +P + +
Sbjct: 188 ---KASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGV 244
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF-WPS 330
D++ A L+ G P +++ + L + +G +VL ++ G P+
Sbjct: 245 CKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPN 304
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y + ++ K G +++A+ V + + GT P V YN+L+ G AGN AV
Sbjct: 305 VVTYTSVISGYCKAGRMEDAMAVYNDMVAVGT-SPNVVTYNVLINGYGKAGNMGSAVAVY 363
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++M + C+ + T+ L+DG CR G+ +A ++ EM P T+ ++I C
Sbjct: 364 QQMILR-RCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCK 422
Query: 451 IGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
+ EA+ +L++M + + P +++ ++ +C
Sbjct: 423 QNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLC 457
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
HL ++ SQ YR ++ +C G+ DA+Q+ +++ + P +R
Sbjct: 109 HLFSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSF 168
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C ++ A +L+++A G +Y+ + GR+ + + + G
Sbjct: 169 LSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGG 228
Query: 327 FW-PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
+ P + + + + K G V +ALE++E M + P +NIL+ GLC A +
Sbjct: 229 VYSPDVWSFNVVIKGVCKVGDVQKALELVER-MDEFGCSPDTVTHNILVNGLCRAKEVSK 287
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
L+++ + C+ N TY ++ G C+ GR +A V +M+ P V TYNVLI
Sbjct: 288 GREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLI 347
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G G AV ++MI + LPD+ +SSL+ C
Sbjct: 348 NGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYC 386
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 49/309 (15%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
++ L + +++ +EV+ +++ D C + + I Y +AG++ +A++++ ++
Sbjct: 275 LVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAV 334
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCR 165
++N L+ K + +A ++ LR C + + + L+D C+C
Sbjct: 335 GTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL-----PDVVTFSSLIDGYCRCG 389
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D A+ ++ EM P+ ++ I++ C R EA H L M R
Sbjct: 390 QLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTD---IAPQA 446
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
IY ++ LC GK+ +A IL ++ KG +
Sbjct: 447 FIYNPVIDVLCKGGKVDEANMILIEMEEKGCR---------------------------- 478
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P +Y+ + I +GRI E +M G P ++ + ++ L K G
Sbjct: 479 --------PDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG 530
Query: 346 MVDEALEVI 354
M E ++
Sbjct: 531 MPGEVDHIM 539
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 15/229 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ + V QM C F++ I Y R GQL++A+ ++ +
Sbjct: 342 TYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEM 401
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLC 162
+Q++ +F ++ K+++ EA H L +R+ ++ + N ++DVLC
Sbjct: 402 AQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRT----DIAPQAFIYNPVIDVLC 457
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A + EM+ +GC PD+ +Y IL+ G C R+ EA + F ++ + G
Sbjct: 458 KGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAV----TFFHKMVETGCS 513
Query: 223 EDIVIYRTLLFALCDQ---GKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
D ++ + + L G++ M+I K P ID+
Sbjct: 514 PDSIVVNSFISCLLKSGMPGEVDHIMRIAAGGASSSWKDPSPVTQSIDI 562
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 202/456 (44%), Gaps = 28/456 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VYA+M+ L + R E + ++ + E V+ I Y G L AV +F+ +
Sbjct: 179 VYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM 238
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C +++ L+ K KL+ A +LF R V + + + L+ C +
Sbjct: 239 DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN-VVTYTALIQGQCSDGQ 297
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + Q M+ G P+ + +L+ LC R+ EA LL S+ QKG + +
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI----QKGIKVNEI 353
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y +L+ LC G+ A ++++ ++ +G P + + + +++ A ++++
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGF-VPDAHTYSSLIDGLCRQKELSEAMLVLDD 412
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G PS +Y+ + +L E K+LD+M G P + Y + + +G
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+++A E + MV P + YN L+ G + G ++ A K M GC N E+Y
Sbjct: 473 MEDA-EHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN-GCKPNEESY 530
Query: 407 GILVDGLCR------------------DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+L+ L + + ++L +LEEM+ ++ YN + L
Sbjct: 531 TVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG--LLEEMVKLQLPSEIDIYNCFLTSL 588
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C + + EA + L EM S P V++S++A C
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCC 624
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 8/388 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG + EA+S+F + C + T++ + + A L L + +
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETL-LSDAMAEGFEPNVV 213
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N L+D C +LA+ VF+ MD GC P+ +Y L+ G C R+L+ A L
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML---- 269
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F R+ G ++V Y L+ C G++ A ++L+ + GL P + +
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL-VPNEWTCSVLIDALC 328
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
E + A+ L+ + +G + Y+++ L GR D+++ + ++GF P
Sbjct: 329 KHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAH 388
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + + L + + EA+ V+++ M KG P+ Y I++ L + + L K
Sbjct: 389 TYSSLIDGLCRQKELSEAMLVLDDMMEKGV-QPSPVTYTIIIDELVREVGADGSKKILDK 447
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M G + TY I V C +GR +A ++ M+ P + TYN LI G ++G
Sbjct: 448 MIA-AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLG 506
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
+A + M++ P+ ++ L+
Sbjct: 507 LTSQAFSTFKHMVANGCKPNEESYTVLL 534
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 178/407 (43%), Gaps = 16/407 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--- 138
+ T I Y AG L + +L + + ++ + + + L A LF
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 139 -LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
LR C V++ + L+ LC A+ VF M GC PD Y ++ GLC
Sbjct: 134 PLRGC----VRTAF-TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLC 188
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R EA LL +G ++V+Y L+ C+ G ++ A+ + E++ G
Sbjct: 189 GAGRTREAETLLSDAM----AEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGC- 243
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+P R + + ++ A L + + G +P++ +Y+A+ ++G++ +
Sbjct: 244 SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYR 303
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L M G P+ + AL K V EA ++ + KG V + VY L+ GL
Sbjct: 304 LLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEI-VYTSLIDGL 362
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C AG A A ++ + Q G V + TY L+DGLCR EA VL++M+ + P
Sbjct: 363 CKAGRFAAADRLMQTLVSQ-GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY ++I L + L++MI+ PD+ ++ V S C
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYC 468
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A H + + + + ++ Y TL+ A C G + + + L +LR G AP S +
Sbjct: 52 ARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGF-APDSHAY 110
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ + A L +RG + + +Y+A+ L G + E V M+
Sbjct: 111 TSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQA 170
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P +Y + L G EA ++ + M +G F P V VYN L+ G C+ G+
Sbjct: 171 DGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG-FEPNVVVYNALIDGYCNVGDLE 229
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+AV ++M GC N TY L+ G C+ + A + M+ P V TY L
Sbjct: 230 LAVDVFERMDVN-GCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTAL 288
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I+G CS G+ A L+ M + +P+ S L+ ++C
Sbjct: 289 IQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALC 328
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 176/410 (42%), Gaps = 30/410 (7%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + R+ E + ++ + + + V+ + I +AG+ A L + L
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
V ++++L+ + ++ +L A +L L V+ + +++D L + +D +
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEA-MLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +M G PD +Y I ++ C++ R+ +A H++ M G ++V Y
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV----DHGVCPNLVTYNA 497
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-----------CPCNDGE--DI 277
L+ + G A + ++ G K P + + L P N I
Sbjct: 498 LICGYANLGLTSQAFSTFKHMVANGCK-PNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556
Query: 278 EGAKSL--INEALIRGGIPS-LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
K L + E +++ +PS + Y+ L R+ E +L EM++ PS +Y
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVY 616
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM- 393
+ +A + M+ EAL ++ MVK ++P + Y ++ LC+ G+ A M
Sbjct: 617 TSIIACCCRLKMLTEALTFVDS-MVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDML 675
Query: 394 SKQVGCVANGE--TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
SK+ N E + IL+DGL + G E S +L M ++Y P Y
Sbjct: 676 SKEY----NYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 157/389 (40%), Gaps = 56/389 (14%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S+I L ++ R ++ + +++ I R +L+EA+ +
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVL 410
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKE----------SKLEAAHI--------LFLRS-CY- 143
++ + ++ ++ E+V+E K+ AA I +F+RS C+
Sbjct: 411 DDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHE 470
Query: 144 GWEVKSRIQSLNLLMDVLCQ---------CRRSDL-----ALHVFQEMDFQGCYPDRESY 189
G + L+++ +C C ++L A F+ M GC P+ ESY
Sbjct: 471 GRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESY 530
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQ----KGSGEDIV---------IYRTLLFALC 236
+L++ L N S+ W+I++ G E++V IY L +LC
Sbjct: 531 TVLLRLLIKKESSNNIPANSVSI-WKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
++ +A +L ++ L + I C C E A + ++ + G IP L
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTE-ALTFVDSMVKSGYIPQL 648
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA---LEV 353
SY + L EG I +V +M +K + + + + L + G V E L V
Sbjct: 649 ESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSV 708
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+EE+ + P+ +Y L + DA +
Sbjct: 709 MEEK----NYRPSDALYARLTGKITDAND 733
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 45/367 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N+L+ LC R A +F EM PD +Y I++ G C L A LL M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ +G + V Y +++ LCD+G++ DA++++E ++ G+ + + C
Sbjct: 312 ----AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G D+ A++ +E RG +Y+A+ L G + E ++VL EM KG V
Sbjct: 368 KG-DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + K G + EA ++ +MV+ P V Y L GLC G+ A L +
Sbjct: 427 TYTVLIDGYCKVGKMTEAF-LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASR---------------------------- 424
M + G N TY L++GLC+ G +A R
Sbjct: 486 MCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544
Query: 425 -------VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+L+EML + P + TYNVL+ G C G+ LE M+ + P+ + ++
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604
Query: 478 SLVASVC 484
SL+ C
Sbjct: 605 SLMKQYC 611
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 19/327 (5%)
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRE--SYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
VLC+ D A+ +FQE+ P++ SY+IL+K LC R+ +A L M
Sbjct: 232 VLCRLPL-DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEM----- 279
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
S D+V Y ++ C +++ A+++L ++ +GL+ + C++G+ +
Sbjct: 280 --ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQ-V 336
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A ++ + ++ G + A ++ + +G + DEM+ +G V Y A
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L + G + EA V++E KG V V Y +L+ G C G A + KM Q
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAV-TYTVLIDGYCKVGKMTEAFLVHNKMV-QK 454
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
N TY L DGLC+ G A+ +L EM + + TYN LI GLC G +A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ + +M PD+ +++++ ++C
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALC 541
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 197/466 (42%), Gaps = 41/466 (8%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FAT 85
A+++F+E EK N Y ++ L + RI + ++ D+M D V +
Sbjct: 241 AVQLFQELPEK------NTCSYNILLKALCTAGRIKDAHQLFDEMASPP----DVVTYGI 290
Query: 86 AIRTYARAGQLNEAVSLFKNLS----QFNCVNWTQSFNTL-----LKEMVKESKLEAAHI 136
+ Y +L A+ L ++ + N V +T L + + V+ + H
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL--HVFQEMDFQGCYPDRESYHILMK 194
+ L + V S CR+ DLA + F EM +G D +Y L+
Sbjct: 351 VVLDAAVFTTVMSGF------------CRKGDLAAARNWFDEMQKRGLAADGVTYTALIN 398
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC L EA +L M KG D V Y L+ C GK+ +A + K+++K
Sbjct: 399 GLCRAGELKEAERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ + C G D+ A L++E +G ++ +Y+++ L G + +
Sbjct: 455 RVTPNVVTYTALSDGLCKQG-DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ + +M G P + Y + AL + +D A +++E + KG PT+ YN+L+
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNVLM 572
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C +G L+ M ++ N TY L+ C + + + + ML +
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEK-NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV 631
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P TYN+LI+G C EA+ + EMI + S +++L+
Sbjct: 632 VPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 174/401 (43%), Gaps = 12/401 (2%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++ +M E + + I GQ+++AV + +++ V F T++
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
++ L AA F + + + L++ LC+ A V QEM+ +G D
Sbjct: 366 CRKGDLAAARNWF-DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +L+ G C ++ EA + + ++ QK ++V Y L LC QG + A
Sbjct: 425 AVTYTVLIDGYCKVGKMTEA----FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAI 304
++L ++ KGL+ + + C G + +++I+ + G+ P + +Y+ +
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID--MDEAGLKPDVYTYTTIIG 538
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + +L EM KG P++V Y + G V+ ++E M++
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW-MLEKNIH 597
Query: 365 PTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P YN L+K C N + +Y +S++V V N TY IL+ G C+ EA
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV--VPNENTYNILIKGHCKARNMKEAL 655
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
EM+ + + +YN LIR L K EA E+M
Sbjct: 656 YFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 143/359 (39%), Gaps = 42/359 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G Y ++I L + + E + V+ +M+ + + I Y + G++ EA +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLC 162
+ Q ++ L + K+ + AA+ L C G E+ I + N L++ LC
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN--IFTYNSLINGLC 506
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + A+ +MD G PD +Y ++ LC + L+ A LL M KG
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML----DKGIK 562
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------------------------ 258
IV Y L+ C G+++ ++LE +L K +
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 259 ----------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
P + I + +++ A +E + +G + +SY+A+ L
Sbjct: 623 YKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNK 682
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ + E ++ ++MR +Y + F + ++ L + +E+V+ T V ++
Sbjct: 683 KKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALC-DELVEVTLVKSI 740
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 15/403 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS---CYGWEVK 148
RAG+ +AV +F +++ + ++NT++ +K LEA LR C+G +K
Sbjct: 27 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG--FRLRDQMVCHG--LK 82
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ N+L+ LC+ R + EM Q PD +Y IL GL N +
Sbjct: 83 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR----NGDSKA 138
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ S+F + + G LL LC GK+ A ++L+ ++ GL + + +
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 198
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE +EGA S + R P +Y+A+ L RI +L EM+ G
Sbjct: 199 GYCQTGE-LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ + + A + G +++ ++ EM + P V Y ++ C G AV
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCF-IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 316
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L M + + N + Y ++D G +A ++E+M P + TYN+LI+GL
Sbjct: 317 ILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
C+ + EA + + + +PD +++L+ S CC +++
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-SACCYRGNID 417
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 181/427 (42%), Gaps = 10/427 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + R+ E ++D+M ++ +R G +S
Sbjct: 82 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 141
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + + + LL + K+ K+ A + V +R+ N L++
Sbjct: 142 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV-IYNTLINGY 200
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ + A F +M + PD +Y+ L+ GLC R+ A LL M G
Sbjct: 201 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM----QDNGV 256
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + TL+ A G+++ +L ++ GLK I C +G+ I A
Sbjct: 257 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK-IPEAV 315
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+++++ + +P+ Y+A+ ID Y E G + ++++M++ G PS+V Y +
Sbjct: 316 AILDDMFHKDVLPNAQVYNAI-IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + EA E+I + +P YN L+ C GN A+ ++M K G
Sbjct: 375 LCNQSQISEAEEIINS-LSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-YGIK 432
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+ GL GR E + ++M+ + P +N+++ G + +A
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 492
Query: 461 LEEMISQ 467
+EM+ +
Sbjct: 493 RKEMLQK 499
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P+ SY+ + ++ GR + +V DEM + P+ + Y + K G ++
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR- 71
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ ++MV P YN+LL GLC AG L +M+ Q V +G TY IL DGL
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGFTYSILFDGL 130
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R+G + + L T ++L+ GLC GK A L+ +++ +P
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190
Query: 474 SVWSSLVASVCCNTADLNVCRKTLEQLSS 502
++++L+ C T +L T Q+ S
Sbjct: 191 VIYNTLINGY-CQTGELEGAFSTFGQMKS 218
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 35/132 (26%)
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-------------- 435
L++M + N +Y +++ G+ R GR +A V +EM R+
Sbjct: 2 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 61
Query: 436 ---------------------PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
P TYNVL+ GLC G+ E L+EM SQ +PD
Sbjct: 62 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 121
Query: 475 VWSSLVASVCCN 486
+S L + N
Sbjct: 122 TYSILFDGLSRN 133
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 185/397 (46%), Gaps = 20/397 (5%)
Query: 10 TPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
TP ++ ++K+ P AL+ F + Y H+ + I I + + + +
Sbjct: 49 TPNLVNSVLKRLWNHGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 107
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I +M+ FA YA AG+ ++AV LF N+ + C SFNT+L + K
Sbjct: 108 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 167
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++E A+ LF R+ G + N++++ C +R+ L V +EM +G P+
Sbjct: 168 SKRVEKAYELF-RALRG-RFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLT 225
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ ++KG ++ A + F + ++ D+V Y T++ G+I+ A +
Sbjct: 226 TYNTMLKGFFRAGQIRHA----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 281
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++R+G+ + + + C +++E A + E + RG P++ +Y+ + L+
Sbjct: 282 FDEMIREGVLPSVATYNAMIQVLCKK-DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 340
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ G G++++ M +G P+ Y + + V++AL + E+M G +P +
Sbjct: 341 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF-EKMGSGDCLPNL 399
Query: 368 RVYNILLKG---------LCDAGNSAVAVMYLKKMSK 395
YNIL+ G + AGN A A L+ SK
Sbjct: 400 DTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSK 436
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 147/348 (42%), Gaps = 52/348 (14%)
Query: 145 WEVKSRIQSLNL---------LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
W + R++SL + + + + D A+ +F M GC+ D S++ ++
Sbjct: 105 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 164
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC +R+ +A L ++ R S D V Y +L C + +++L++++ +G
Sbjct: 165 LCKSKRVEKAYELFRALRGRFSV-----DTVTYNVILNGWCLIKRTPKTLEVLKEMVERG 219
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P+L +Y+ M + G+I
Sbjct: 220 IN------------------------------------PNLTTYNTMLKGFFRAGQIRHA 243
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM+ + +V Y + G + A V +E M++ +P+V YN +++
Sbjct: 244 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE-MIREGVLPSVATYNAMIQ 302
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC N AV+ ++M ++ G N TY +L+ GL G F +++ M
Sbjct: 303 VLCKKDNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 361
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P +TYN++IR + +A+ E+M S LP++ ++ L++ +
Sbjct: 362 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 409
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +++ +A + G+ + K+ M G + L + L L K V++A E+
Sbjct: 118 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 177
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++G F YN++L G C + + LK+M ++ G N TY ++ G
Sbjct: 178 FRA--LRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVER-GINPNLTTYNTMLKGF 234
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G+ A EM R V TY ++ G G+ A +EMI + LP +
Sbjct: 235 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 294
Query: 474 SVWSSLVASVC 484
+ +++++ +C
Sbjct: 295 ATYNAMIQVLC 305
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 181/400 (45%), Gaps = 20/400 (5%)
Query: 96 LNEAVSLFKNLSQ--FNCV-------NWTQS-FNTLLKEMVKESKLEAAHILFLRSCYGW 145
L E + L K+ + F C+ NW F+ LLK VK ++ F++
Sbjct: 153 LTELILLVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVG 212
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V S I + N L++ L + L HV+ EM G P+ +++IL C D +++
Sbjct: 213 YVPSVI-ACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKM 271
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L M ++G DIV Y TL+ C +G++ DA + + R+ +
Sbjct: 272 NDFLEKM----EEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTA 327
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C +G + A L++ + RG P + SY+ + EG+++E +L EM
Sbjct: 328 LMNGLCKEGR-VREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGN 386
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALE-VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G +P + K+G + AL V+E E + P + Y+ L+ LC+
Sbjct: 387 GIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDI--YDYLVASLCEEDRPF 444
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L++MS Q G + + E Y L++ LC+ +A + E+++ + P + TY L
Sbjct: 445 AAKTLLERMS-QRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKAL 503
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
IR LC +G+ EA +EEM+ PD + +++ C
Sbjct: 504 IRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYC 543
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 188/414 (45%), Gaps = 18/414 (4%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C +F ++ Y +AG + E F + + V + N LL ++K + H
Sbjct: 178 CNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSN-----H 232
Query: 136 ILFLRSCYG----WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
I YG V + N+L + C+ D ++M+ +G PD +Y+
Sbjct: 233 IHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNT 292
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ G C RL++A +L M+ R D+V Y L+ LC +G++++A Q+L ++
Sbjct: 293 LINGYCGRGRLSDAFYLYRIMYRRCVLP----DLVSYTALMNGLCKEGRVREAHQLLHRM 348
Query: 252 LRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +GL P + +C C +G+ +E +KSL+ E + G P + + EG
Sbjct: 349 VHRGLN-PDVVSYNTLICGYCKEGKMLE-SKSLLYEMIGNGIFPDSFTCRVLIQGYRKEG 406
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ ++ E+ G S +Y+ +A+L ++ A + + E M + ++P V +Y
Sbjct: 407 WLISALNLVVELEKFGVSISPDIYDYLVASLCEEDR-PFAAKTLLERMSQRGYIPHVEIY 465
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
N L++ LC G+ + LK N TY L+ LCR GR +EA +++EEML
Sbjct: 466 NKLIESLC-KGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEML 524
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P E +I G C +A L + ++ D +S+LV VC
Sbjct: 525 HFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVC 578
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 175/386 (45%), Gaps = 12/386 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + + + + I +M + +++M+ + E + T I Y G+L++A L+
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + + S+ L+ + KE ++ AH L R + + + S N L+ C+
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRG-LNPDVVSYNTLICGYCK 369
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + + EM G +PD + +L++G + L A +L+ + + G
Sbjct: 370 EGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVEL----EKFGVSI 425
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
IY L+ +LC++ + A +LE++ ++G +++ C G+ + A SL
Sbjct: 426 SPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCK-GDCVADALSL 484
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF- 342
E ++ P+L +Y A+ L GR +E +K+++EM G P + A +
Sbjct: 485 KAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCR 544
Query: 343 -KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
KD E+L V+ K + Y+ L++ +C+ G+ A M L++ +VG
Sbjct: 545 EKDAGKAESLLVL---FAKEFQIFDSESYSTLVRIVCEDGDVA-KFMELQERMLKVGFAP 600
Query: 402 NGETYGILVDGLCRDGRFLEASRVLE 427
N T ++DGL ++ ++ +LE
Sbjct: 601 NSLTCKYMIDGLRKNVGLVKEKLILE 626
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 190/451 (42%), Gaps = 20/451 (4%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
AL++ E +E+ YPN Y ++ LS+ + + K +I++M +
Sbjct: 234 ALELLSEMQERGCYPN----DVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRS 141
I + + G EA L + + ++NTL+ + K ++ + F L+S
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ I S N L+ C+ A +F E+ + P +Y+ L+ GLC
Sbjct: 350 ----KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A L M + +G DI Y L+ G + A ++L KGLK P
Sbjct: 406 LDAALRLKKEM----TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK-PDR 460
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + D A S+ E L G P + +Y+ L +G E +L+
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + G P V Y + + K+G + +A EV E + KG P+V Y +L+
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV-APSVVTYTVLIHAHAAKQ 579
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+A MY KM ++ AN TY +++GLC R EA + +EM + P +Y
Sbjct: 580 MLDLAFMYFSKMLEK-SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+LI C++G EA+ EM+ + PD
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQPD 669
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 209/495 (42%), Gaps = 51/495 (10%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT------------EMKEVIDQM 71
P AL+ F+ + P+++ + V+ +++ IL ++ + EM V+D +
Sbjct: 99 PRVALRFFRWVMAQ-PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVL 157
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
C VF IR G L + NC N +L+ + E+ L
Sbjct: 158 IAGHVXCL-LVFDKMIRN----GLLPDVK---------NC-------NRILRVLRDENLL 196
Query: 132 EAAHILFLRSCYG----WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
A ++ YG + +K + + N ++D C+ R D AL + EM +GCYP+
Sbjct: 197 SKA-----KNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y++L+ GL L +A L+ M G Y L+ C +G +A +
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEML----NSGLNVSAYTYNPLINGFCQKGLFVEAFDL 307
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+E+++ + S + + C + G + ++ L P + S++++
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCK-WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYC 366
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G I E + DE++ + P+++ Y + L G +D AL + +E +G F P +
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDI 425
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y IL+ G G ++A + +M + G + Y + G + A + E
Sbjct: 426 FTYTILVNGCFKLGYVSMARGFFNEMLSK-GLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
EML + P V TYNV + LC G EA LE M+S +PD ++S++ N
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKN- 543
Query: 488 ADLNVCRKTLEQLSS 502
L R+ ++ S
Sbjct: 544 GHLRKAREVFNEMLS 558
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 193/469 (41%), Gaps = 43/469 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ +L + N +++ K V M+ + + T + +Y + G++++A+ L + +
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERG 245
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ + K+ +LE A L + + + N L++ CQ A
Sbjct: 246 CYPNDVTYNVLVNGLSKKGELEQAKGL-IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +EM + +P +Y+ LM GLC ++ L +S + + DIV + +
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT-GVRLRFS---DMLKSKFTPDIVSFNS 360
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL+ C G I +A + +++ + L + + C G ++ A L E +
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY-LDAALRLKKEMTDQ 419
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +Y+ + + G + +EM +KG P Y ++ K A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EEM+ F P V YN+ + LC GN A L+ M G + + TY ++
Sbjct: 480 FS-MQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD-GLIPDHVTYTSII 537
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI------------------------- 445
+G ++G +A V EML + P V TY VLI
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597
Query: 446 ----------RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC + EA + +EM + LP+ ++ L+ C
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 1/219 (0%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
Y ++I+ + K T++ + + + + Y + L + E ++++ M
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D + + I + + G L +A +F + ++ L+ + L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A + F + V + + + N +++ LC RR D A F EM+ +G P++ SY IL
Sbjct: 583 LAFMYFSKMLEK-SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ CN EA L M R Q S V + L
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 186/426 (43%), Gaps = 21/426 (4%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL--F 138
+V + TY + G + A + + + N LLK++++ +E L F
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+ G + + + + ++ C+ R D A VF+EM + C + +Y++++ GLC
Sbjct: 236 ME---GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ EA + + G D Y L+ LC G++++A +L+++ GLK
Sbjct: 293 SGAVEEA----FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKP 348
Query: 259 PKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ + DG EG A ++NE + G P+ Y + L G++
Sbjct: 349 -----NVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGR 403
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
K+L+EM G P Y + F+ D A E++ EM +P Y I++
Sbjct: 404 ASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELL-NEMRNSGILPNAYTYGIMI 462
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G S A L++M + G N Y L+ G ++G A LE M +
Sbjct: 463 NGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
P + YN LI+GL ++G+ EA + ++ + +PD +S L+ C T +L
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY-CKTRNLEKAD 580
Query: 495 KTLEQL 500
+ L+Q+
Sbjct: 581 QLLQQM 586
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 170/402 (42%), Gaps = 49/402 (12%)
Query: 117 SFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
+++T L+ K +AA +F R C EV + N+++ LC+ + A
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEV-----TYNVMISGLCRSGAVEEAFG 301
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+EM G PD +Y LM GLC RL EA LL M S G ++V+Y TL+
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM----SCSGLKPNVVVYATLV 357
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPK---------------------------SRRHR 265
+GK +A IL +++ G++ K HR
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417
Query: 266 IDLC---PCNDGE----DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
D P G D +GA L+NE G +P+ +Y M L G E +
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L+EM ++G P+ MY + K+G + A E + E M K +P + YN L+KGL
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL-ENMTKANVLPDLFCYNSLIKGLS 536
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A Y ++ K+ G V + TY L+ G C+ +A ++L++ML P
Sbjct: 537 TVGRIEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+TY L+ G + L+ M+ PD ++ ++
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVI 637
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 197/479 (41%), Gaps = 44/479 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ L + R+ E K ++D+M + V+AT + + + G+ EA + +
Sbjct: 317 TYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEM 376
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ L++ + K +L A L L + + + LM Q
Sbjct: 377 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKL-LNEMIKVGHRPDTFTYHPLMQGHFQHYD 435
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + EM G P+ +Y I++ GLC + EA +LL M +G +
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI----SEGLKPNAF 491
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y L+ +G I A + LE + + + P + + + IE A+ +
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANV-LPDLFCYNSLIKGLSTVGRIEEAEEYYAQ 550
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVE-GDKVLDEMRTKGFWPSLVMYEAKLAALFKD- 344
RG +P +YS + I Y + R +E D++L +M G P+ Y L FK
Sbjct: 551 VQKRGLVPDEFTYSGL-IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSN 609
Query: 345 ------------------------GMV------DEALEV---IEEEMVKGTFVPTVRVYN 371
G+V E +EV + E+ K VP + +Y+
Sbjct: 610 DHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 669
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ GLC + AV L +M+K+ G Y L+DG CR G A V + +L
Sbjct: 670 SLISGLCKMADMEKAVGLLDEMAKE-GLEPGIVCYNALIDGFCRSGDISRARNVFDSILA 728
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
+ P TY LI G C G +A ++M+ + PD V++ L A+ C + ADL
Sbjct: 729 KGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVL-ATGCSDAADL 786
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 196/473 (41%), Gaps = 44/473 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VYA+++ + + E +++++M + ++ IR + GQL A L +
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ T +++ L++ + + A L L + + ++++ LCQ
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL-LNEMRNSGILPNAYTYGIMINGLCQNGE 470
Query: 167 SDLALHVFQEMDFQG-----------------------------------CYPDRESYHI 191
S A ++ +EM +G PD Y+
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+KGL R+ EA + ++ ++G D Y L+ C ++ A Q+L+++
Sbjct: 531 LIKGLSTVGRIEEAEEY----YAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
L GLK P + + L D E S++ L G P Y + +L
Sbjct: 587 LNSGLK-PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 645
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ VL E+ G P L +Y + ++ L K +++A+ +++E M K P + YN
Sbjct: 646 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE-MAKEGLEPGIVCYN 704
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G C +G+ + A + + G + N TY L+DG C++G +A + ++ML
Sbjct: 705 ALIDGFCRSGDISRARNVFDSILAK-GLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD 763
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R P YNVL G CS E ++L E + +S++S+LV C
Sbjct: 764 RGIAPDAFVYNVLATG-CSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFC 815
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 185/432 (42%), Gaps = 31/432 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y MI L ++ E ++++M + + ++A I +++ G ++ A
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL-- 161
+N+++ N + +N+L+K + ++E A E +++Q L+ D
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE----------EYYAQVQKRGLVPDEFTY 563
Query: 162 -------CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
C+ R + A + Q+M G P+ ++Y L++G + + +L SM
Sbjct: 564 SGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSML- 622
Query: 215 RISQKGSGE--DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
GSG+ D IY ++ L ++ A +L ++ + GL P + +
Sbjct: 623 -----GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL-VPDLHIYSSLISGLC 676
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
D+E A L++E G P + Y+A+ G I V D + KG P+ V
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y A + K+G + +A ++ ++ + +G P VYN+L G DA + A+ ++
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRG-IAPDAFVYNVLATGCSDAADLEQALFLTEE 795
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + A+ + LV G C+ GR E ++L M+ R P +T +I G
Sbjct: 796 MFNR--GYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAG 853
Query: 453 KQYEAVMWLEEM 464
K EA E+
Sbjct: 854 KLCEAHRVFAEL 865
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 220/496 (44%), Gaps = 30/496 (6%)
Query: 6 PRLLTPTYLSQ-------------IIKKQKSPLTALKIFKEAKEKYPN---YRHNGPVYA 49
P+ + PT+L+Q I ++Q +P AL F A PN Y HN Y
Sbjct: 43 PKHINPTHLNQFSPHLDSNLVIEVIKEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYV 102
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
++I +L + K ++++ S D + + IR Y +G A+ F + +
Sbjct: 103 AIIDLLLSHSLFPIAKNLLEKHGTFS----DLLVSKLIRAYGYSGDTKSAIFWFHKVKEI 158
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
S+N +L +VK +++ A F + VK + ++ C+ D
Sbjct: 159 QQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDN 218
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A VF EM C P+ + + L+ G C + A L M + K D V Y
Sbjct: 219 ARKVFDEMI---CEPNLITCNTLINGYCKKGDMENARIFLCRM---MESKDCLPDTVTYS 272
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ C +G++ +A + ++ +L +G + I C G +++ A+ L+ + +
Sbjct: 273 TLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRG-NVDEARRLLTKMRL 331
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G ++A++ ++ L G+ E EM KG +E + A K DE
Sbjct: 332 NGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDE 391
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A+ +++E KG +V +N +L+ L + G AV+ LK++ K +GC+ N +Y +
Sbjct: 392 AISLLKEMQAKG-ISRSVGSFNAVLRILVEIGELDKAVLLLKQV-KNMGCLPNLVSYSTV 449
Query: 410 VDGLCRD-GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+ GLCR GR E + ++++ML + Y+ L+ G C G + A+ + I++
Sbjct: 450 ICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKN 509
Query: 469 KLPDISVWSSLVASVC 484
+ ++ +S V +C
Sbjct: 510 YVINLQSFSFFVNLMC 525
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 191/396 (48%), Gaps = 12/396 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKD-SVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++G+L + N+I K DQ+ D+ D S + T IR + + G ++ A +F +
Sbjct: 167 WNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEM 226
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C + NTL+ K+ +E A I R + + + L+D C+
Sbjct: 227 I---CEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGE 283
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A M +GC P+ +Y+ ++ GLC ++EA LL M R++ G E++
Sbjct: 284 LNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKM--RLN--GVKENVA 339
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ ++L L GK ++A+ +++RKG+K ++ H + + + A SL+ E
Sbjct: 340 THLSILKGLSVAGKSEEAIGYFSEMIRKGMKL-DAKEHEVVITAYCKMRKPDEAISLLKE 398
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+G S+ S++A+ L G + + +L +++ G P+LV Y + L +
Sbjct: 399 MQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHG 458
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGET 405
+ + + ++M++ F +Y+ L+ G C+AGN +A+ + ++K V N ++
Sbjct: 459 RMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNY--VINLQS 516
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ V+ +C G+ +EA ++ ++M R V++Y
Sbjct: 517 FSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSY 552
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 210/493 (42%), Gaps = 50/493 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S+++ E ++ +M + C + I +AG+ NEA +F L
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ N ++NTLL + +E K++ L L I + N ++D LC+
Sbjct: 548 KEMNLEPTDCTYNTLLAGLGREGKVKEVMQL-LEGMNSNSFPPNIITYNTVLDCLCKNGE 606
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ--KGSGED 224
+ AL + M GC PD SY+ +M GL + RL+EA FW Q K D
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA-------FWMFCQMKKVLAPD 659
Query: 225 IVIYRTLLFALCDQGKIQDAMQIL-EKILRKGLKAPKSRRHRI-DLCPCNDGED--IEGA 280
T+L + G +++A+ + E IL+ K +S H + + DG + IE A
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFA 719
Query: 281 KSLINEALIR-------------------------------GGIPSLASYSAMAIDLYNE 309
+++ + L+ G SY+A+ L +E
Sbjct: 720 ENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I +++ EM+ G P Y L A+ K +++ L+ I+EEM + T
Sbjct: 780 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLK-IQEEMHNKGYKSTYVT 838
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y + MS+ G TYG L+DGL +DG +A + +E
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSE--GFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
ML P YN+L+ G G + E M+ Q PDI ++ ++ ++C +
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD-G 955
Query: 489 DLNVCRKTLEQLS 501
LN +QL+
Sbjct: 956 RLNDGLSYFKQLT 968
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 191/463 (41%), Gaps = 21/463 (4%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
P AL++F + P H M+ ++ R+ ++ +V D M+ + F
Sbjct: 81 PEEALELFLSVARQ-PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T G L A + + V ++N L+ +VK S + + ++
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVK-SGFDREAMDVYKAMA 198
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V +++ ++LM + R ++ + + EM+ +G P+ SY I ++ L RL
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA Y + ++ ++G D+V L+ LCD G++ DA + K +KA +
Sbjct: 259 EA----YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWK-----MKASDQKP 309
Query: 264 HRID----LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
R+ L C D D + N G ++ SY+A L GR+ E V
Sbjct: 310 DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVF 369
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
DEM+ KG P Y + ++ K + ALE+ + G PT Y +L +
Sbjct: 370 DEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG---PTPNGYTHVLF-INY 425
Query: 380 AGNSAVAVMYLKK--MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G S ++ LK+ + K G V + ++ GL + GR A RV E+ P
Sbjct: 426 HGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
TY ++I+ EA+ EMI PD+ +SL+
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 215/512 (41%), Gaps = 47/512 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + L K++ T + + E + + R N Y I +L ++ R+ E
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR--GVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ +M+ + C+ I+ AG+L +A +F + + ++ TLL +
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 126 VKESKLEA-AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ + I G+ + S +D LCQ R D AL VF EM +G P
Sbjct: 322 GDSGDSRSVSEIWNALKADGY--NDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 185 DRESYHILMKGLCNDRRLNEA-----------------THLLY--------------SMF 213
+ SY+ L+ G R N A TH+L+ +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ KG D+V +L+ L G++ A ++ ++ G+ +P + + + + C+
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI-SPDNITYTMMIKCCSK 498
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
+ + A + E + P + + +++ LY GR E K+ E++ P+
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLK 391
Y LA L ++G V E ++++ E M +F P + YN +L LC G N A+ ++Y
Sbjct: 559 YNTLLAGLGREGKVKEVMQLL-EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M+ GC+ + +Y ++ GL ++GR EA + +M + P T ++
Sbjct: 618 TMN---GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRS 673
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
G EA+ + E I Q PD V S V S+
Sbjct: 674 GLMKEALHTVREYILQ---PDSKVDRSSVHSL 702
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 208/498 (41%), Gaps = 56/498 (11%)
Query: 22 KSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS 81
+S AL + KEA Y +NG +Y L +S E +V M D
Sbjct: 153 RSAPVALPVMKEAGIVLNAYTYNGLIY-----FLVKSGFDREAMDVYKAMAADGVVPTVR 207
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ + + + V L + S+ ++ + + +LE A+ + LR
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI-LRK 266
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + + +L+ +LC R A VF +M PDR +Y L+ C D
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSG 325
Query: 202 LNEATHLLYSMFWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG----- 255
+ + S W + G +++V Y + ALC G++ +A+ + +++ +KG
Sbjct: 326 DSRSV----SEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381
Query: 256 ----------LKAPKSRR------HRIDLCPCND-----------GEDIEGAKSLINEAL 288
LKA + R H P + G+ E K+L L
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 289 I--RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ +G +P + + +A+ L GR+ +V E++ G P + Y + K
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA--GNSAVAVMY-LKKMS-KQVGCVAN 402
DEA+++ EM++ P V N L+ L A GN A + Y LK+M+ + C
Sbjct: 502 ADEAMKIF-AEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDC--- 557
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+ GL R+G+ E ++LE M S+ P + TYN ++ LC G+ A+ L
Sbjct: 558 --TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLY 615
Query: 463 EMISQAKLPDISVWSSLV 480
M +PD+S +++++
Sbjct: 616 SMTMNGCMPDLSSYNTVM 633
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 188/444 (42%), Gaps = 24/444 (5%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQ-----MKGDSCECKDSVFATAIRTYARAGQLNEAV 100
P YA++ IL R MKE + ++ DS + SV + R G +++
Sbjct: 658 PDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGT-EKSI 716
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+N++ + + +++ K + AAH L ++ V + S N L+
Sbjct: 717 EFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHEL-VKKFENLGVSLKTGSYNALICG 775
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
L D+A +F EM GC PD +YH+++ + R+ + + M KG
Sbjct: 776 LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM----HNKG 831
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
V Y T++ L + +A+ + +++ +G + DG +IE A
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDG-NIEDA 890
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD-----KVLDEMRTKGFWPSLVMYE 335
++L +E L G P+ A Y+ + G + GD ++ + M +G P + Y
Sbjct: 891 EALFDEMLECGCEPNCAIYNILL-----NGYRIAGDTEKVCELFESMVEQGMNPDIKSYT 945
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L DG +++ L ++ G P + YN+L+ GL +G A+ M K
Sbjct: 946 VVIDTLCADGRLNDGLSYFKQLTDMG-LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G N TY L+ L + G+ EA ++ EE+L + + P V TYN LIRG G
Sbjct: 1005 K-GIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPE 1063
Query: 456 EAVMWLEEMISQAKLPDISVWSSL 479
A MI P+ S + L
Sbjct: 1064 NAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 291 GGIPSLASYSAM--AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G +P++ +YS + A + V G +L EM +G P++ Y + L + G ++
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVG--LLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 349 EALEVI---EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA--VMYLKKMSKQVGCVANG 403
EA ++ EEE K P V +L++ LCDAG A A V + K S Q +
Sbjct: 259 EAYRILRKMEEEGCK----PDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK---PDR 311
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+D G S + + Y V +Y + LC +G+ EA+ +E
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 464 MISQAKLPDISVWSSLVAS 482
M + +P ++SL++
Sbjct: 372 MKQKGIIPQQYSYNSLISG 390
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 30/429 (6%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +I L ++ RI+ E + M E + T + + G++ +A SLF ++
Sbjct: 73 YNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSME 128
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++ TL+ K + E A+ L L+ + + S +++ LC+ R+
Sbjct: 129 GAGITPSDVTYTTLIDVFCKMCQFETAYGL-LQLMASRKCSPTVYSYCSIINGLCKNRKV 187
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A +F+EM GC PDR +Y+ L+ GLC +RL+EA LL M + G D +
Sbjct: 188 DQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV----ENGFQPDKIT 243
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ LC +I++A + + + ++G AP H + + + A S++
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGC-APDLVTHTVLVSKLCILRKLRPALSVVRN- 301
Query: 288 LIRGGIPSLASYSAMAIDLYNE-GRIVEGD---KVLDEMRTKGFWPSLVMYEAKLAALFK 343
P+ + ++ E GR D ++L +M +G P++V Y A F
Sbjct: 302 -----YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTA-----FF 351
Query: 344 DGMVD--EALEVIEE--EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
G+ D E + E M++ P + YN+L+ G C A +A ++ M Q G
Sbjct: 352 KGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMD-QSGL 410
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY LV CR G+ +L M+ R P V T++ L+ GL +G+ A
Sbjct: 411 PPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYS 470
Query: 460 WLEEMISQA 468
+L +SQ
Sbjct: 471 FLNLAMSQG 479
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 194/443 (43%), Gaps = 16/443 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + +I + I +M + + I T +A +++ A+
Sbjct: 32 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
F+ + + + V ++NTLL + K ++ A LF S G + + L+DV
Sbjct: 92 FFETMPEPDVV----TYNTLLGGLCKNGRVAQACSLF-GSMEGAGITPSDVTYTTLIDVF 146
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + + A + Q M + C P SY ++ GLC +R++++A Y +F + G
Sbjct: 147 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA----YQLFEEMKLAGC 202
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y TL+ LC + ++ +A +L ++ G + K + C + I+ A
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTT-DRIKEAF 261
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP-SLVMYEAKLAA 340
L +G P L +++ + L ++ L +R P ++++Y
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKL---RPALSVVRNYPACPEAVILYTPIFRE 318
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + D A ++++ M + P V Y KGL D A ++M +Q G
Sbjct: 319 LGRRRGFDRAARLLQK-MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ-GIE 376
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ Y +LVDG C+ R A +++ M P + TYN L+ C GK
Sbjct: 377 PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 436
Query: 461 LEEMISQAKLPDISVWSSLVASV 483
L M+S+ + PD++ WS+LVA +
Sbjct: 437 LHTMVSRGRQPDVATWSTLVAGL 459
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 157/399 (39%), Gaps = 45/399 (11%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N LL + + + E ++F R + + K S L+ LC+ + D A EM
Sbjct: 4 NALLDLLERARRSEQIVVVF-RRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMA 62
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+ PD +Y++++ LC RR++ A +M D+V Y TLL LC
Sbjct: 63 REKLVPDVFTYNVVIDTLCKARRISRAIEFFETM--------PEPDVVTYNTLLGGLCKN 114
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G++ A + + G+ + C + E A L+ R P++ S
Sbjct: 115 GRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQ-FETAYGLLQLMASRKCSPTVYS 173
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y ++ L ++ + ++ +EM+ G P V Y + L + EA +++ M
Sbjct: 174 YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTV-M 232
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---- 414
V+ F P + L++GLC A + + M+KQ GC + T+ +LV LC
Sbjct: 233 VENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQ-GCAPDLVTHTVLVSKLCILRK 291
Query: 415 -----------------------------RDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
R F A+R+L++M R P V TY
Sbjct: 292 LRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFF 351
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+GL + A M+ Q PD+ ++ LV C
Sbjct: 352 KGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFC 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ + Y + AL + G +D+A I E M + VP V YN+++ LC A + A+
Sbjct: 33 PNALSYCYLVKALCRTGKIDKACSTIAE-MAREKLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + M + + TY L+ GLC++GR +A + M P TY LI
Sbjct: 92 FFETMPE-----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 146
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C + + A L+ M S+ P + + S++ +C N
Sbjct: 147 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKN 184
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 190/451 (42%), Gaps = 20/451 (4%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
AL++ E +E+ YPN Y ++ LS+ + + K +I++M +
Sbjct: 234 ALELLSEMQERGCYPN----DVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRS 141
I + + G EA L + + ++NTL+ + K ++ + F L+S
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ I S N L+ C+ A +F E+ + P +Y+ L+ GLC
Sbjct: 350 ----KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A L M + +G DI Y L+ G + A ++L KGLK P
Sbjct: 406 LDAALRLKKEM----TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK-PDR 460
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + D A S+ E L G P + +Y+ L +G E +L+
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + G P V Y + + K+G + +A EV E + KG P+V Y +L+
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV-APSVVTYTVLIHAHAAKQ 579
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+A MY KM ++ AN TY +++GLC R EA + +EM + P +Y
Sbjct: 580 MLDLAFMYFSKMLEK-SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+LI C++G EA+ EM+ + PD
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQPD 669
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 209/495 (42%), Gaps = 51/495 (10%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT------------EMKEVIDQM 71
P AL+ F+ + P+++ + V+ +++ IL ++ + EM V+D +
Sbjct: 99 PRVALRFFRWVMAQ-PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVL 157
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
C VF IR G L + NC N +L+ + E+ L
Sbjct: 158 IAGHVXCL-LVFDKMIRN----GLLPDVK---------NC-------NRILRVLRDENLL 196
Query: 132 EAAHILFLRSCYG----WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
A ++ YG + +K + + N ++D C+ R D AL + EM +GCYP+
Sbjct: 197 SKA-----KNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y++L+ GL L +A L+ M G Y L+ C +G +A +
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEML----NSGLNVSAYTYNPLINGFCQKGLFVEAFDL 307
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+E+++ + S + + C + G + ++ L P + S++++
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCK-WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYC 366
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G I E + DE++ + P+++ Y + L G +D AL + +E +G F P +
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDI 425
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y IL+ G G ++A + +M + G + Y + G + A + E
Sbjct: 426 FTYTILVNGCFKLGYVSMARGFFNEMLSK-GLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
EML + P V TYNV + LC G EA LE M+S +PD ++S++ N
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKN- 543
Query: 488 ADLNVCRKTLEQLSS 502
L R+ ++ S
Sbjct: 544 GHLRKAREVFNEMLS 558
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 193/469 (41%), Gaps = 43/469 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ +L + N +++ K V M+ + + T + +Y + G++++A+ L + +
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERG 245
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ + K+ +LE A L + + + N L++ CQ A
Sbjct: 246 CYPNDVTYNVLVNGLSKKGELEQAKGL-IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +EM + +P +Y+ LM GLC ++ L +S + + DIV + +
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT-GVRLRFS---DMLKSKFTPDIVSFNS 360
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL+ C G I +A + +++ + L + + C G ++ A L E +
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY-LDAALRLKKEMTDQ 419
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +Y+ + + G + +EM +KG P Y ++ K A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++EEM+ F P V YN+ + LC GN A L+ M G + + TY ++
Sbjct: 480 FS-MQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD-GLIPDHVTYTSII 537
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI------------------------- 445
+G ++G +A V EML + P V TY VLI
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597
Query: 446 ----------RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC + EA + +EM + LP+ ++ L+ C
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 1/219 (0%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
Y ++I+ + K T++ + + + + Y + L + E ++++ M
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
D + + I + + G L +A +F + ++ L+ + L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
A + F + V + + + N +++ LC RR D A F EM+ +G P++ SY IL
Sbjct: 583 LAFMYFSKMLEK-SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+ CN EA L M R Q S V + L
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 186/457 (40%), Gaps = 44/457 (9%)
Query: 8 LLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L+ ++ +IK++ + + F A + +G + +I +LSE N +
Sbjct: 57 FLSKNIITSVIKEEVNRQLGFRFFIWASRR--ERLRSGESFGLVIDMLSEDNGCDLYWQT 114
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
++++K F I YA+ G +AV F + +F+C ++N +L+ M++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMR 174
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
E + + +LMD L + R+ A +F +M +G P+R
Sbjct: 175 EDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y IL+ GLC +A L Y M G+ D V + LL C G++ +A ++
Sbjct: 235 TYTILISGLCQRGSPEDARKLFYEM----KASGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
L + G + L YS++ L+
Sbjct: 291 LRLFEKDGF------------------------------------VLGLRGYSSLIDGLF 314
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
R + ++ M + P +++Y + L K G +++AL+++ KG P
Sbjct: 315 RARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG-ITPDT 373
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
YN ++K LC G +MS + + T+ IL+ +CR+G +A +
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMS-ETESFPDACTHTILICSMCRNGLVRKAEEIFL 432
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
E+ P V T+N LI GLC G+ EA + L +M
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A ++ NE L P+L ++ + LY +GR + K+ D+M +G P+ V Y ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L + G ++A ++ E G + P +N LL G C G A L+ K G
Sbjct: 242 GLCQRGSPEDARKLFYEMKASGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFEKD-GF 299
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
V Y L+DGL R R+ +A + ML R+ P + Y +LI+GL GK +A+
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L M S+ PD +++++ ++C
Sbjct: 360 LLRSMPSKGITPDTYCYNAVIKALC 384
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 194/462 (41%), Gaps = 25/462 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKE--KYPN-YRHNGPVYASMIGILSESNRIT 62
P +T T L + ++ SP A K+F E K YP+ HN +++ + R+
Sbjct: 231 PNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHN-----ALLDGFCKLGRMV 285
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E E++ + D +++ I RA + +A L+ N+ + N + L+
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILI 345
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ + K K+E A + LRS + N ++ LC + + EM
Sbjct: 346 QGLSKAGKIEDA-LKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
+PD ++ IL+ +C + + +A + F I + G + + L+ LC G+++
Sbjct: 405 FPDACTHTILICSMCRNGLVRKAEEI----FLEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 243 DAMQILEK--ILRKG---LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+A +L K + R L+ S D G ++ K+L + A G P +
Sbjct: 461 EARLLLHKMEVGRPASLFLRLAHSGNRSFDTM-VQSGSILKAYKNLAHFA-DTGNSPDIV 518
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
SY+ + EG I K+L+ ++ KG P V Y + L + G +EA ++
Sbjct: 519 SYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--- 575
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
K F + VY L+ C VA K K++ C+ + ET ++ ++G
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCL-DDETAN-EIEQCFKEG 633
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
A R L E+ R + Y + + GLC G+ +EA+M
Sbjct: 634 ETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ L+E+++ G + ++A K G+ ++A+E M + P V YN++L+
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGR-MKEFDCRPDVFTYNVILRI 171
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
+ + + + C N T+GIL+DGL + GR +A ++ ++M R P
Sbjct: 172 MMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY +LI GLC G +A EM + PD ++L+ C
Sbjct: 232 NRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFC 279
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 202/421 (47%), Gaps = 21/421 (4%)
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH---ILFLRSCYGW 145
T R+ A S ++ + + + S + LL+ V+ K AH L L+ + +
Sbjct: 81 TLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAF 140
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + N+L+ LC+ A+ + +EM PD SY+ +++G C + L +A
Sbjct: 141 NV----YNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196
Query: 206 THLLYSMFWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
L M +GSG +V + L+ A C GK+ +AM +L+++ KGL+A
Sbjct: 197 LQLANEM------QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ C+ GE ++ K+L +E L RG P +Y+ + GR+ E ++ + M
Sbjct: 251 TSLIRGFCDCGE-LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P++ Y + L G EAL+++ M++ P V YNI++ LC
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLL-NLMLQKDEEPNVVTYNIIINKLCKDSLV 368
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW--PCVETY 441
A A+ ++ M K+ + TY L+ GLC G EAS++L ML S + P V ++
Sbjct: 369 ADALEIVELMKKRR-TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISF 427
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
N LI GLC + ++A+ + ++ + DI V ++++ + + D+N + +Q+S
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDI-VTTNILLNSTLKSGDVNKAMELWKQIS 486
Query: 502 S 502
+
Sbjct: 487 N 487
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 189/438 (43%), Gaps = 51/438 (11%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I E + + ++ ++M+G C + I + +AG+++EA+ L
Sbjct: 180 YNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL----- 234
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
LKEM K LEA I++ G+ C C
Sbjct: 235 --------------LKEM-KHKGLEADLIVYTSLIRGF----------------CDCGEL 263
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D +F E+ +G P +Y+ L++G C RL EA+ + F + ++G ++
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEI----FEFMMERGVRPNVYT 319
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC GK ++A+Q+L +L+K + P + I + + A ++
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMLQKD-EEPNVVTYNIIINKLCKDSLVADALEIVELM 378
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW--PSLVMYEAKLAALFKDG 345
R P +Y+++ L +G + E K+L M + P ++ + A + L K
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438
Query: 346 MVDEALEVIE---EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ +AL++ + E++ G V T NILL +G+ A+ K++S V N
Sbjct: 439 RLHQALDIYDLLVEKLGAGDIVTT----NILLNSTLKSGDVNKAMELWKQISNS-KIVPN 493
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+TY ++DG C+ G A +L +M + P V YN L+ LC G +A E
Sbjct: 494 SDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFE 553
Query: 463 EMISQAKLPDISVWSSLV 480
EM PD+ ++ ++
Sbjct: 554 EMQRDDSFPDVISFNIMI 571
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 171/405 (42%), Gaps = 49/405 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSF--NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
QL AVS+F+ Q + SF N L+ +V+ E A F R +
Sbjct: 53 QLKNAVSVFQ---QAVDSGGSLSFAGNNLMATLVRSRNHEVA-FSFYRKMLETDTFINFV 108
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
SL+ L++ Q R++ A V M +G + +Y+IL+KGLC + +A LL M
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
Q D+V Y T++ C+
Sbjct: 169 ----RQNSLMPDVVSYNTVIRGFCE----------------------------------- 189
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G+++E A L NE G SL ++ + G++ E +L EM+ KG L+
Sbjct: 190 -GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLI 248
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + + G +D + +E + +G P YN L++G C G A +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGRLKEASEIFEF 307
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ G N TY L+DGLC G+ EA ++L ML + P V TYN++I LC
Sbjct: 308 MMER-GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDS 366
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTL 497
+A+ +E M + PD ++SL+ +C DL+ K L
Sbjct: 367 LVADALEIVELMKKRRTRPDNITYNSLLGGLCAK-GDLDEASKLL 410
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 183/399 (45%), Gaps = 8/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
++ R + +AVSL + + Q + + S+NT+++ + +LE A + G
Sbjct: 149 LKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA-LQLANEMQGSG 207
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + +L+D C+ + D A+ + +EM +G D Y L++G C+ L+
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++F + ++G + Y TL+ C G++++A +I E ++ +G++ +
Sbjct: 268 ----ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGL 323
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C G+ E A L+N L + P++ +Y+ + L + + + ++++ M+ +
Sbjct: 324 IDGLCGVGKTKE-ALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAV 385
P + Y + L L G +DEA +++ + ++ P V +N L+ GLC
Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQ 442
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ + +++G + T IL++ + G +A + +++ P +TY +I
Sbjct: 443 ALDIYDLLVEKLG-AGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMI 501
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C G A L +M P + ++ L++S+C
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 147/345 (42%), Gaps = 21/345 (6%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+ K K L L + + K++ PN Y +I L + + + + E+++ MK
Sbjct: 330 VGKTKEALQLLNLMLQ-KDEEPNV----VTYNIIINKLCKDSLVADALEIVELMKKRRTR 384
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ----SFNTLLKEMVKESKLEA 133
+ + + + G L+EA L + + + ++T SFN L+ + K ++L
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS--SYTDPDVISFNALIHGLCKGNRLHQ 442
Query: 134 AHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
A ++ L G I + N+L++ + + A+ +++++ P+ ++Y
Sbjct: 443 ALDIYDLLVEKLG---AGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTT 499
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
++ G C LN A LL M R+S+ + Y LL +LC +G + A ++ E++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKM--RLSELPPS--VFDYNCLLSSLCKKGTLDQAWRLFEEM 555
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
R P I + DI+ A+SL+ G P L +YS + G
Sbjct: 556 QRDD-SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGY 614
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+ E D+M GF P + ++ L G D+ E +++
Sbjct: 615 LDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKK 659
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 188/437 (43%), Gaps = 28/437 (6%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K ++ M + C +F + I Y R+G + A L K + C +N L+
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 125 MVKESKLEAAHILFL-RSCYGWEVKSRI--QSLNL--LMDVLCQCRRSDLALHVFQEMDF 179
+ KL + +L L YG + + + +N+ L LC + + A + +EM
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD +Y ++ LCN +++ A + +F + D+ Y L+ + C G
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNA----FLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+Q A + ++++R G AP + + + A L L G IP++ +Y
Sbjct: 530 LLQQARKWFDEMVRDGC-APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY----------------EAKLAALFK 343
+A+ G+I + ++ MR P + MY A + L K
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V EA ++++ V+G P VY+ L+ G C G A M KMS++ G N
Sbjct: 649 AHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGPNV 706
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+D L +D R A +VL ML S P V Y +I GLC +GK EA +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 464 MISQAKLPDISVWSSLV 480
M + P++ +++++
Sbjct: 767 MEEKGCHPNVVTYTAMI 783
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 202/499 (40%), Gaps = 39/499 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LT L ++ + TA + +E + + +G + +L ++ R E
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDS--GFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+I++ + + ++ I A EA+ + +C+ ++ LL
Sbjct: 288 ALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGC 344
Query: 126 VKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+++ +L IL + G RI N L+ C+ A + ++M GC P
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--------DIVIYRTLLFALC 236
Y+IL+ G+C + +L L +++K GE + V L LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVL------ELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK + A I+ +++ KG S ++ CN ++ A L E +P +
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN-ASKVDNAFLLFEEMKSNHVVPDV 515
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + G + + K DEM G P++V Y A + A K + A E+ E
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC--------VANGE---- 404
+ +G +P V Y L+ G C +G A +M + +G
Sbjct: 576 MLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634
Query: 405 ---TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TYG LVDGLC+ + EA +L+ M + P Y+ LI G C +GK EA M
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 462 EEMISQAKLPDISVWSSLV 480
+M + P++ +SSL+
Sbjct: 695 TKMSERGYGPNVYTYSSLI 713
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 211/479 (44%), Gaps = 42/479 (8%)
Query: 26 TALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
A +F+E K H P Y +I + + + ++ D+M D C
Sbjct: 498 NAFLLFEEMKSN-----HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I Y +A +++ A LF+ + C+ ++ L+ K ++E A ++ R
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 143 YGWEVKS---------------RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ I + L+D LC+ + A + M +GC P+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI 672
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ G C +L+EA + F ++S++G G ++ Y +L+ L ++ A+++
Sbjct: 673 VYDALIDGFCKVGKLDEAQMV----FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Query: 248 LEKILRKGLKAPKS--RRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
L ++L AP ID LC ++ S++ E +G P++ +Y+AM
Sbjct: 729 LSRMLENSC-APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE---KGCHPNVVTYTAMID 784
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G++ + +++ +M KG P+ V Y + G++D+A ++++E +K T+
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--MKQTYW 842
Query: 365 PT-VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + Y +++G +++ L ++++ V V Y IL+D C+ GR A
Sbjct: 843 PKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA-VPIIPAYRILIDSFCKAGRLELAL 899
Query: 424 RVLEEMLIRSYWPCVET--YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +EM + + + Y+ LI L K +A +MI + +P++S++ LV
Sbjct: 900 ELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLV 958
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 200/475 (42%), Gaps = 30/475 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A I +E K + + Y+ +IG+L ++++ + ++MK + +
Sbjct: 464 AYSIIREMMSK--GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ + G L +A F + + C ++ L+ +K K+ +A+ LF
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMMLSEG 580
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE----------------SYH 190
+ + L+D C+ + + A ++ M PD + +Y
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC ++ EA LL M S +G + ++Y L+ C GK+ +A + K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVM----SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +G P + + + ++ A +++ L P++ Y+ M L G
Sbjct: 697 MSERGY-GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ E +++ M KG P++V Y A + K G VD+ LE++ + KG P Y
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC-APNFVTY 814
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ C AG A L +M KQ + Y +++G R+ F+ + +L+E+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNRE--FIISLGLLDEIA 871
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS--QAKLPDISVWSSLVASV 483
P + Y +LI C G+ A+ +EM S D ++SSL+ S+
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESL 926
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G PS +Y+A+ R+ V EM GF + L K G EA
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L +IE+E K + TV +Y ++ GLC+A A+ +L +M + C+ N TY IL+
Sbjct: 287 LALIEKEEFK---LDTV-IYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G R + R+L M+ +P +N LI C G A L++M
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ 401
Query: 471 PDISVWSSLVASVCCN 486
P V++ L+ +C N
Sbjct: 402 PGYVVYNILIGGICGN 417
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 188/437 (43%), Gaps = 28/437 (6%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K ++ M + C +F + I Y R+G + A L K + C +N L+
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 125 MVKESKLEAAHILFL-RSCYGWEVKSRI--QSLNL--LMDVLCQCRRSDLALHVFQEMDF 179
+ KL + +L L YG + + + +N+ L LC + + A + +EM
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD +Y ++ LCN +++ A + +F + D+ Y L+ + C G
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNA----FLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+Q A + ++++R G AP + + + A L L G IP++ +Y
Sbjct: 530 LLQQARKWFDEMVRDGC-APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY----------------EAKLAALFK 343
+A+ G+I + ++ MR P + MY A + L K
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V EA ++++ V+G P VY+ L+ G C G A M KMS++ G N
Sbjct: 649 AHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGPNV 706
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+D L +D R A +VL ML S P V Y +I GLC +GK EA +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 464 MISQAKLPDISVWSSLV 480
M + P++ +++++
Sbjct: 767 MEEKGCHPNVVTYTAMI 783
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 202/499 (40%), Gaps = 39/499 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LT L ++ + TA + +E + + +G + +L ++ R E
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDS--GFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+I++ + + ++ I A EA+ + +C+ ++ LL
Sbjct: 288 ALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGC 344
Query: 126 VKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+++ +L IL + G RI N L+ C+ A + ++M GC P
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--------DIVIYRTLLFALC 236
Y+IL+ G+C + +L L +++K GE + V L LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVL------ELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK + A I+ +++ KG S ++ CN ++ A L E +P +
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN-ASKVDNAFLLFEEMKSNHVVPDV 515
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + G + + K DEM G P++V Y A + A K + A E+ E
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC--------VANGE---- 404
+ +G +P V Y L+ G C +G A +M + +G
Sbjct: 576 MLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634
Query: 405 ---TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TYG LVDGLC+ + EA +L+ M + P Y+ LI G C +GK EA M
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 462 EEMISQAKLPDISVWSSLV 480
+M + P++ +SSL+
Sbjct: 695 TKMSERGYGPNVYTYSSLI 713
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 210/479 (43%), Gaps = 42/479 (8%)
Query: 26 TALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
A +F+E K H P Y +I + + + ++ D+M D C
Sbjct: 498 NAFLLFEEMKSN-----HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I Y +A +++ A LF+ + C+ ++ L+ K ++E A ++ R
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 143 YGWEVKS---------------RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ I + L+D LC+ + A + M +GC P+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI 672
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ G C +L+EA + F ++S++G G ++ Y +L+ L ++ A+++
Sbjct: 673 VYDALIDGFCKVGKLDEAQMV----FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Query: 248 LEKILRKGLKAPKS--RRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
L ++L AP ID LC ++ S++ E +G P++ +Y+AM
Sbjct: 729 LSRMLENSC-APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE---KGCHPNVVTYTAMID 784
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G++ + +++ +M KG P+ V Y + G++D+A ++++E +K T+
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--MKQTYW 842
Query: 365 PT-VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + Y +++G +++ L ++++ V V Y IL+D C+ GR A
Sbjct: 843 PKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA-VPIIPAYRILIDSFCKAGRLELAL 899
Query: 424 RVLEEMLIRSYWPCVET--YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + M + + + Y+ LI L K +A +MI + +P++S++ LV
Sbjct: 900 ELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLV 958
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 200/476 (42%), Gaps = 32/476 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A I +E K + + Y+ +IG+L ++++ + ++MK + +
Sbjct: 464 AYSIIREMMSK--GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ + G L +A F + + C ++ L+ +K K+ +A+ LF
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMMLSEG 580
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE----------------SYH 190
+ + L+D C+ + + A ++ M PD + +Y
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC ++ EA LL M S +G + ++Y L+ C GK+ +A + K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVM----SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +G P + + + ++ A +++ L P++ Y+ M L G
Sbjct: 697 MSERGY-GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ E +++ M KG P++V Y A + K G VD+ LE++ + KG P Y
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC-APNFVTY 814
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ C AG A L +M KQ + Y +++G R+ F+ + +L+E+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNRE--FIISLGLLDEIA 871
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA---KLPDISVWSSLVASV 483
P + Y +LI C G+ E + L + +S D ++SSL+ S+
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGR-LELALELHKXMSSCTSYSAADKDLYSSLIESL 926
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +Y+A+ R+ V EM GF + L K G EAL +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
IE+E K + TV +Y ++ GLC+A A+ +L +M + C+ N TY IL+ G
Sbjct: 290 IEKEEFK---LDTV-IYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILLCGC 344
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R + R+L M+ +P +N LI C G A L++M P
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGY 404
Query: 474 SVWSSLVASVCCN 486
V++ L+ +C N
Sbjct: 405 VVYNILIGGICGN 417
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 206/464 (44%), Gaps = 34/464 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY +MI L + R+ E+++V+ +M+ + T I Y R G + +A + + +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ T ++NTLLK ++ A + FL G V S + L+D L +
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG--VAPNEISCSTLLDGLFKAG 478
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+++ AL++++E +G + +++ ++ GLC R+ EA LL R+ + D
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD----RMKELRCPPDS 534
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ YRTL C G++ A ++ K+ G AP + + + +
Sbjct: 535 LTYRTLFDGYCKLGQLGTATHLMNKMEHLGF-APSVEMFNSFITGHFIAKQWHKVNDIHS 593
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E RG P+L +Y A+ EG + E + EM G P++ + A ++ +K+G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653
Query: 346 MVDEALEVIEE----EMVKGTFVPTVRV---------------------YNILLKGLCDA 380
VDEA V+++ +M+ G + T+ + +N+++ GLC +
Sbjct: 654 KVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKS 713
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A A + + + + + TY L+ G G EA + + ML P + T
Sbjct: 714 GRIADAKSLFESLRNKR-FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YN LI GLC GK AV ++ S+ P+ +++L+ C
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/558 (20%), Positives = 238/558 (42%), Gaps = 92/558 (16%)
Query: 9 LTPTYLSQIIKKQK-SPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
LTP L +++ + P AL +F+ A + H A ++ IL+ + R + + +
Sbjct: 68 LTPALLQAALRRVRLDPDAALHLFRLAPSRPSLVSH-----AQLLHILARARRFHDARAL 122
Query: 68 IDQMKGDSCEC--------KDSVFATA-----IRTYARAGQLNEAVSLFKNLSQFNCVNW 114
+ + + +D F+ +R +A AGQL+ A+++F + + C
Sbjct: 123 LSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPS 182
Query: 115 TQSFNTLLKEMVKES----------KLEAAHIL------------------------FLR 140
+S N LL ++V+ ++ A +L F+
Sbjct: 183 LRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE 242
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G ++ + + + +MD C ++ A + + + +G P+ +Y +L+KG C D
Sbjct: 243 EMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDG 302
Query: 201 RLNEATHLL---------------YSMFWR-ISQKGSGED----------------IVIY 228
R+ EA ++ Y M Q+G +D + +Y
Sbjct: 303 RMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVY 362
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
T++ LC G++++ ++L+++ G++ K + + C +G + + + +
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE--MCRMM 420
Query: 289 IRGGIPSLA-SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+R G+ + +Y+ + + I + ++ M +G P+ + L LFK G
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
++AL + +E + +G V +N ++ GLC G A A L +M K++ C + TY
Sbjct: 481 EQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEAEELLDRM-KELRCPPDSLTYR 538
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE-EMIS 466
L DG C+ G+ A+ ++ +M + P VE +N I G I KQ+ V + EM +
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF-IAKQWHKVNDIHSEMSA 597
Query: 467 QAKLPDISVWSSLVASVC 484
+ P++ + +L+A C
Sbjct: 598 RGLSPNLVTYGALIAGWC 615
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 178/452 (39%), Gaps = 58/452 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T L + K K+ AL ++KE + N + ++I L + R+ E +E++D+M
Sbjct: 469 TLLDGLFKAGKTE-QALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
K C + T Y + GQL A L + + FN+ + +
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585
Query: 132 EAAHILFLRSCYGWEVKSRIQSLNLLMD---VLCQCRRSDL--ALHVFQEMDFQGCYPDR 186
+ + E+ +R S NL+ + C+ +L A +++ EM G P+
Sbjct: 586 HKVNDIH------SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFW----------------------RISQKGSGED 224
LM + +++EA +L + I+
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V++ ++F LC G+I DA + E LR P + + + C I+ A SL
Sbjct: 700 NVMWNVIIFGLCKSGRIADAKSLFES-LRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ L G P++ +Y+++ L G++ + +++++KG P+ + Y + K+
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G EA ++ ++ + +G +++ + +++ D N
Sbjct: 819 GKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVD---------------------PNYI 857
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
TY L+ G + G E S++ +EM IR P
Sbjct: 858 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 188/437 (43%), Gaps = 28/437 (6%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K ++ M + C +F + I Y R+G + A L K + C +N L+
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 125 MVKESKLEAAHILFL-RSCYGWEVKSRI--QSLNL--LMDVLCQCRRSDLALHVFQEMDF 179
+ KL + +L L YG + + + +N+ L LC + + A + +EM
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD +Y ++ LCN +++ A + +F + D+ Y L+ + C G
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNA----FLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+Q A + ++++R G AP + + + A L L G IP++ +Y
Sbjct: 530 LLQQARKWFDEMVRDGC-APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY----------------EAKLAALFK 343
+A+ G+I + ++ MR P + MY A + L K
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V EA ++++ V+G P VY+ L+ G C G A M KMS++ G N
Sbjct: 649 AHKVKEARDLLDVMSVEGC-EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGPNV 706
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY L+D L +D R A +VL ML S P V Y +I GLC +GK EA +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 464 MISQAKLPDISVWSSLV 480
M + P++ +++++
Sbjct: 767 MEEKGCHPNVVTYTAMI 783
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 202/499 (40%), Gaps = 39/499 (7%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LT L ++ + TA + +E + + +G + +L ++ R E
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDS--GFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+I++ + + ++ I A EA+ + +C+ ++ LL
Sbjct: 288 ALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGC 344
Query: 126 VKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+++ +L IL + G RI N L+ C+ A + ++M GC P
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE--------DIVIYRTLLFALC 236
Y+IL+ G+C + +L L +++K GE + V L LC
Sbjct: 403 GYVVYNILIGGICGNEKLPSLDVL------ELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK + A I+ +++ KG S ++ CN ++ A L E +P +
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN-ASKVDNAFLLFEEMKSNHVVPDV 515
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + G + + K DEM G P++V Y A + A K + A E+ E
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC--------VANGE---- 404
+ +G +P V Y L+ G C +G A +M + +G
Sbjct: 576 MLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634
Query: 405 ---TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TYG LVDGLC+ + EA +L+ M + P Y+ LI G C +GK EA M
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 462 EEMISQAKLPDISVWSSLV 480
+M + P++ +SSL+
Sbjct: 695 TKMSERGYGPNVYTYSSLI 713
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 211/479 (44%), Gaps = 42/479 (8%)
Query: 26 TALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
A +F+E K H P Y +I + + + ++ D+M D C
Sbjct: 498 NAFLLFEEMKSN-----HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I Y +A +++ A LF+ + C+ ++ L+ K ++E A ++ R
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 143 YGWEVKS---------------RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ I + L+D LC+ + A + M +GC P+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHI 672
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ G C +L+EA + F ++S++G G ++ Y +L+ L ++ A+++
Sbjct: 673 VYDALIDGFCKVGKLDEAQMV----FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Query: 248 LEKILRKGLKAPKS--RRHRID-LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
L ++L AP ID LC ++ S++ E +G P++ +Y+AM
Sbjct: 729 LSRMLENSC-APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE---KGCHPNVVTYTAMID 784
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
G++ + +++ +M KG P+ V Y + G++D+A ++++E +K T+
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE--MKQTYW 842
Query: 365 PT-VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P + Y +++G +++ L ++++ V V Y IL+D C+ GR A
Sbjct: 843 PKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA-VPIIPAYRILIDSFCKAGRLELAL 899
Query: 424 RVLEEMLIRSYWPCVET--YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +EM + + + Y+ LI L K +A +MI + +P++S++ LV
Sbjct: 900 ELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLV 958
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 200/475 (42%), Gaps = 30/475 (6%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A I +E K + + Y+ +IG+L ++++ + ++MK + +
Sbjct: 464 AYSIIREMMSK--GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I ++ + G L +A F + + C ++ L+ +K K+ +A+ LF
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMMLSEG 580
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE----------------SYH 190
+ + L+D C+ + + A ++ M PD + +Y
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
L+ GLC ++ EA LL M S +G + ++Y L+ C GK+ +A + K
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVM----SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
+ +G P + + + ++ A +++ L P++ Y+ M L G
Sbjct: 697 MSERGY-GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ E +++ M KG P++V Y A + K G VD+ LE++ + KG P Y
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC-APNFVTY 814
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
+L+ C AG A L +M KQ + Y +++G R+ F+ + +L+E+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNRE--FIISLGLLDEIA 871
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS--QAKLPDISVWSSLVASV 483
P + Y +LI C G+ A+ +EM S D ++SSL+ S+
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESL 926
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G PS +Y+A+ R+ V EM GF + L K G EA
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L +IE+E K + TV +Y ++ GLC+A A+ +L +M + C+ N TY IL+
Sbjct: 287 LALIEKEEFK---LDTV-IYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G R + R+L M+ +P +N LI C G A L++M
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ 401
Query: 471 PDISVWSSLVASVCCN 486
P V++ L+ +C N
Sbjct: 402 PGYVVYNILIGGICGN 417
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 15/403 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS---CYGWEVK 148
RAG+ +AV +F +++ + ++NT++ +K LEA LR C+G +K
Sbjct: 75 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG--FRLRDQMVCHG--LK 130
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ N+L+ LC+ R + EM Q PD +Y IL GL N +
Sbjct: 131 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR----NGDSKA 186
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
+ S+F + + G LL LC GK+ A ++L+ ++ GL + + +
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C GE +EGA S + R P +Y+A+ L RI +L EM+ G
Sbjct: 247 GYCQTGE-LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P++ + + A + G +++ ++ EM + P V Y ++ C G AV
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCF-IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 364
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
L M + + N + Y ++D G +A ++E+M P + TYN+LI+GL
Sbjct: 365 ILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
C+ + EA + + + +PD +++L+ S CC +++
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-SACCYRGNID 465
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 181/427 (42%), Gaps = 10/427 (2%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + R+ E ++D+M ++ +R G +S
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
LF + + + LL + K+ K+ A + V +R+ N L++
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV-IYNTLINGY 248
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CQ + A F +M + PD +Y+ L+ GLC R+ A LL M G
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM----QDNGV 304
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + TL+ A G+++ +L ++ GLK I C +G+ I A
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK-IPEAV 363
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+++++ + +P+ Y+A+ ID Y E G + ++++M++ G PS+V Y +
Sbjct: 364 AILDDMFHKDVLPNAQVYNAI-IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + EA E+I + +P YN L+ C GN A+ ++M K G
Sbjct: 423 LCNQSQISEAEEIINS-LSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-YGIK 480
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+ GL GR E + ++M+ + P +N+++ G + +A
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 540
Query: 461 LEEMISQ 467
+EM+ +
Sbjct: 541 RKEMLQK 547
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
GR + + + + G P + + A G + EA+ ++ G P
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN+++ G+ AG AV +M+++ + N TY ++DG + G R+ ++M
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ P TYNVL+ GLC G+ E L+EM SQ +PD +S L + N
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 194/451 (43%), Gaps = 36/451 (7%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I + I+ + ++ +M E + + + Y G++N+A+ L+ ++
Sbjct: 440 YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
V +F TLL + + + A LF W VK + N++++ C+
Sbjct: 500 GKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE-WNVKPNRVTYNVMIEGYCEEGNM 558
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV 226
A EM +G PD SY L+ GLC + +EA +F KG+ E + +
Sbjct: 559 SKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-----KVFVDGLHKGNCELNEI 613
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK----- 281
Y LL C +GK+++A+ + + + +G +DL G I+G+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQDMGLRG----------VDLDLVCYGVLIDGSLKHKDR 663
Query: 282 ----SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
L+ E RG P Y++M G E + D M +G P+ V Y A
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY----NILLKGLCDAGNSAVAVMYLKKM 393
+ L K G V+EA E++ +M G VP Y +IL KG+ G+ AV +
Sbjct: 724 INGLCKAGFVNEA-EILCSKMRPGNSVPNQVTYGCFLDILTKGV---GDMKKAVELHNAI 779
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K G +AN TY +L+ G CR GR EAS ++ M+ P TY +I LC
Sbjct: 780 LK--GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRND 837
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ M + PD +++L+ C
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 202/419 (48%), Gaps = 10/419 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +I L E ++ KE+I QM+ C+ + I + ++ EAV + K+L
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++ TL+ + K + E + + +++ L++ L + +
Sbjct: 289 AGKELKPDVVTYCTLVCGLCKVQEFEVG-LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL++ + + G P+ Y+ L+ LC R +EA L F R+ + G + V
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL----FDRMGKIGLCPNDV 403
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +GK+ A+ L +++ GLK + + C G DI A+SL+ E
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFG-DISAAESLMAE 462
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ + P++ +Y+++ ++G+I + ++ EM KG PS+ + L+ LF+ G+
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGL 522
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A+++ EM + P YN++++G C+ GN + A +L +M ++ G V + +Y
Sbjct: 523 IRDAVKLF-TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK-GIVPDTYSY 580
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET-YNVLIRGLCSIGKQYEAVMWLEEM 464
L+ GLC G+ EA +V + L + E Y L+ G C GK EA+ ++M
Sbjct: 581 RPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDM 638
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 173/366 (47%), Gaps = 7/366 (1%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
F+ L++ V+ ++ ++F + +++L+ L+ L + R LA+ +F +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G PD Y +++ LC + L+ A ++ M G +IV Y L+ LC
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM----EATGCDVNIVPYNVLIDGLCK 274
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ K+ +A+ I + + K LK P + +C ++ E +I+E L PS A
Sbjct: 275 KQKVWEAVGIKKDLAGKELK-PDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+ S++ L G++ E ++ + G P++ +Y A + +L K DEA E++ +
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA-ELLFDR 392
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M K P Y+IL+ C G A+ +L +M +G + Y L++G C+ G
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI-DMGLKPSVYPYNSLINGHCKFG 451
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
A ++ EM+ + P V TY L+ G CS GK +A+ EM + +P I ++
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511
Query: 478 SLVASV 483
+L++ +
Sbjct: 512 TLLSGL 517
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 193/482 (40%), Gaps = 61/482 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++I L + E + + D+M D ++ I + R G+L+ A+S +
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---------------------------- 138
+N+L+ K + AA L
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 139 ---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALHVFQEMDFQGCYPDRESYHIL 192
LR + K + S+ +L R+ L A+ +F EM P+R +Y+++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
++G C + +++A L M +KG D YR L+ LC G+ +A K+
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMI----EKGIVPDTYSYRPLIHGLCLTGQASEA-----KVF 599
Query: 253 RKGLKAPKSRRHRIDLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
GL + I C +G+ +E A S+ + +RG L Y +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGK-LEEALSVCQDMGLRGVDLDLVCYGVLI---- 654
Query: 308 NEGRIVEGDK-----VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
+G + D+ +L EM +G P V+Y + + A K G EA I + M+
Sbjct: 655 -DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG-IWDLMINEG 712
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
VP Y ++ GLC AG A + KM + V N TYG +D L + ++
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEILCSKM-RPGNSVPNQVTYGCFLDILTKGVGDMKK 771
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ L +++ TYN+LIRG C G+ EA + MI PD ++++++
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISE 831
Query: 483 VC 484
+C
Sbjct: 832 LC 833
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 190/439 (43%), Gaps = 46/439 (10%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F I+ Y R+ ++ + V +FK + ++ + + ++ + LL +VK A LF
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELF-DD 217
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
++ + ++ LC+ + A + +M+ GC + Y++L+ GLC ++
Sbjct: 218 MINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD------------------------ 237
+ EA + + + K D+V Y TL+ LC
Sbjct: 278 VWEAVGIKKDL----AGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333
Query: 238 -----------QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+GK+++A+ +++++ G+ +P + + G + + A+ L +
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGV-SPNIFVYNALIDSLCKGRNFDEAELLFDR 392
Query: 287 ALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G P+ +YS + ID++ G++ L EM G PS+ Y + + K G
Sbjct: 393 MGKIGLCPNDVTYSIL-IDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFG 451
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ A E + EM+ PTV Y L+ G C G A+ +M+ + G V + T
Sbjct: 452 DISAA-ESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIVPSIYT 509
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
+ L+ GL R G +A ++ EM + P TYNV+I G C G +A +L EMI
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569
Query: 466 SQAKLPDISVWSSLVASVC 484
+ +PD + L+ +C
Sbjct: 570 EKGIVPDTYSYRPLIHGLC 588
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 15/242 (6%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
K K L + KE ++ + + +Y SMI S++ E + D M + C
Sbjct: 659 KHKDRKVFLGLLKEMHDR--GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE----SKLEAAH 135
+ + I +AG +NEA L + N V ++ L + K K H
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELH 776
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L+ + + + N+L+ C+ R + A + M G PD +Y ++
Sbjct: 777 NAILKG-----LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISE 831
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + +A L SM ++KG D V Y TL+ C G++ A ++ ++LR+G
Sbjct: 832 LCRRNDVKKAIELWNSM----TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 256 LK 257
LK
Sbjct: 888 LK 889
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 181/396 (45%), Gaps = 10/396 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-S 141
F I+ AG++ ++ L L++F + TL+ K+ ++E A LF
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G R + +L++ L + ++++M G +P+ +Y+ +M LC D R
Sbjct: 226 KLGLVANER--TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A + +F + ++G +IV Y TL+ LC + K+ +A ++++++ G+
Sbjct: 284 TKDA----FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G+ + A SL + RG PSL +Y+ + +G K++ E
Sbjct: 340 TYNTLIDGFCGVGK-LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G PS V Y + + +++A++ + M + VP V Y++L+ G C G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K M ++ C N Y ++ G C++G A ++L+EM + P V +Y
Sbjct: 458 QMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+I LC K EA +E+MI P S+ S
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 193/451 (42%), Gaps = 50/451 (11%)
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
+ ++ + K ++ I +Y ++ LN ++S F + V + FN LL +V S
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 132 EAAHILFLRSCYGWEVKSRI----QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
F E KS++ S +L+ C+ + + + E+ G P+
Sbjct: 146 NQWWSFF------NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVV 199
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ G C + +A L F+ + + G + Y L+ L G + ++
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDL----FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK+ G+ + + C DG + A + +E RG ++ +Y+ + L
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGR-TKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
E ++ E +KV+D+M++ G P+L+ Y + G + +AL + + +G P++
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG-LSPSL 373
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSK-------------------------------- 395
YNIL+ G C G+++ A +K+M +
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 396 --QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
++G V + TY +L+ G C G+ EASR+ + M+ ++ P YN +I G C G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y A+ L+EM + P+++ + ++ +C
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 166/371 (44%), Gaps = 18/371 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCV----NWTQSFNTLLKEMVKESKLEAAHIL 137
++ T I + G++ +A LF + + V +T N L K VK+ E +
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ + + N +M+ LC+ R+ A VF EM +G + +Y+ L+ GLC
Sbjct: 260 QEDGVF-----PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +LNEA ++ M G +++ Y TL+ C GK+ A+ + + +GL
Sbjct: 315 REMKLNEANKVVDQM----KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL- 369
Query: 258 APKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+P + I + C G D GA ++ E RG PS +Y+ + + +
Sbjct: 370 SPSLVTYNILVSGFCRKG-DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++ M G P + Y + G ++EA + + MV+ P +YN ++ G
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS-MVEKNCEPNEVIYNTMILG 487
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G+S A+ LK+M ++ N +Y +++ LC++ + EA R++E+M+ P
Sbjct: 488 YCKEGSSYRALKLLKEMEEK-ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Query: 437 CVETYNVLIRG 447
+++ R
Sbjct: 547 STSILSLISRA 557
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 14/302 (4%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P L T + + K A ++F E +E+ N Y ++IG L ++ E
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER--GVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+V+DQMK D + T I + G+L +A+SL ++L ++N L+
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
++ A + ++ +K + +L+D + + A+ + M+ G P
Sbjct: 383 FCRKGDTSGAAKM-VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D +Y +L+ G C ++NEA+ L SM +K + VIY T++ C +G A
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMV----EKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 245 MQILEKILRKGLKAPK--SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSA 301
+++L+++ K L AP S R+ I++ C + + E A+ L+ E +I GI PS + S
Sbjct: 498 LKLLKEMEEKEL-APNVASYRYMIEVL-CKERKSKE-AERLV-EKMIDSGIDPSTSILSL 553
Query: 302 MA 303
++
Sbjct: 554 IS 555
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 158/367 (43%), Gaps = 45/367 (12%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N+L+ VLC R + A +F EM PD +Y IL+ G C L A LL M
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDM 320
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
R G + +Y +++ LCD+G++ DA+ ++E ++ + ++ + CN
Sbjct: 321 VAR----GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK------- 325
G D+ A+ +E +G +Y+ + L G + E +KVL EM +
Sbjct: 377 KG-DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435
Query: 326 ----------------------------GFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
G P++V Y A L K G V A E++ E
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
KG + YN L+ GLC AG A+ + M G + TY L+D LC+ G
Sbjct: 496 SNKGLELNAC-TYNSLINGLCKAGYLDQAMRTMADMDA-AGLKPDVYTYTTLIDALCKSG 553
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
A +L+EML P + TYNVL+ G C G+ LE M+ + P+ + ++
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613
Query: 478 SLVASVC 484
SL+ C
Sbjct: 614 SLMKQYC 620
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 185/436 (42%), Gaps = 17/436 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNL 106
Y ++ +L + R+ + +++ D+M D V + I Y G+L AV L ++
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASPP----DVVTYGILIHGYCALGELENAVKLLDDM 320
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +++ + + ++ A + + + +L C +
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF---CNK 377
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
DL A F EM +G D +Y L+ GLC L EA +L M R D
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV----D 433
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y L+ C +GK+ +A Q+ ++++G+ + C G D++ A L+
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG-DVQAANELL 492
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+E +G + +Y+++ L G + + + + +M G P + Y + AL K
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +D A ++++E M+ PT+ YN+L+ G C +G L+ M ++ N
Sbjct: 553 GELDRAHDLLQE-MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNAT 610
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+ C + + + M R+ P TYN+LI+G C EA + EM
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670
Query: 465 ISQAKLPDISVWSSLV 480
I + S +S+L+
Sbjct: 671 IEKGFRLTASSYSALI 686
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 113/232 (48%), Gaps = 7/232 (3%)
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G +E A+ L +E P + +Y + G + K+LD+M +G P+
Sbjct: 273 CGAGR-VEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPN 328
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+Y + +A L G V +AL V+E+ MV + VY +L G C+ G+ A +
Sbjct: 329 ATVYTSVVALLCDKGRVSDALTVVED-MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M ++ G +G TY L++GLCR G EA +VL+EML R TY VL+ G C
Sbjct: 388 DEMQRK-GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
GK EA M+ + P++ +++L + C D+ + L ++S+
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL-CKQGDVQAANELLHEMSN 497
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 8/402 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S++ +L + R+++ V++ M ++V+ T + + G L A F
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++ TL+ + + +L+ A + L+ + + +L+D C+
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKV-LQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ A V M +G P+ +Y L GLC + A LL+ M S KG
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM----SNKGLEL 502
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y +L+ LC G + AM+ + + GLK + C GE ++ A L
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE-LDRAHDL 561
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ E L G P++ +Y+ + GR+ G K+L+ M K P+ Y + L +
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS-LMKQYC 620
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G ++ I + M P YNIL+KG C A + A + +M ++ G
Sbjct: 621 IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK-GFRLTA 679
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+Y L+ L + +F+EA ++ +M + + YN I
Sbjct: 680 SSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 144/356 (40%), Gaps = 45/356 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
+G Y ++I L + + E ++V+ +M + + + + Y + G++ EA +
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVH 457
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ Q ++ L + K+ ++AA+ +L S G E+ + + N L++ LC
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA--CTYNSLINGLC 515
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ D A+ +MD G PD +Y L+ LC L+ A LL M G
Sbjct: 516 KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML----DNGIK 571
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA------------------------ 258
IV Y L+ C G+++ ++LE +L K +
Sbjct: 572 PTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEI 631
Query: 259 ----------PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
P + I + ++ A+ NE + +G + +SYSA+ L
Sbjct: 632 YKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNK 691
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEEEMVK 360
+ + VE K+ +MR +GF +Y + F + ++ L E++E +VK
Sbjct: 692 KKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVK 747
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 21/343 (6%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I S S I E +++ ++M+ + E V+++ I R G + A +LF +S
Sbjct: 290 YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL-----MDVLC 162
Q + V ++ L+ + K ++EAA IL L E++S+ LNL+ MD C
Sbjct: 350 QRDIVPNAHTYGALIGGVCKAGQMEAAEILLL------EMQSKGVDLNLVIFNTTMDGYC 403
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D AL + M+ +G D +Y+IL GLC R +EA +L SM +KG
Sbjct: 404 RRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV----EKGVK 459
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V + + C +G + +A ++ + +KG + P + + E ++ A
Sbjct: 460 PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG-EVPNIITYNTLIDAYCKKEKVKQAHK 518
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ +E + +G +P L +YS++ GR+ E K+ +EMR KG ++ Y + ++ L
Sbjct: 519 IKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLS 578
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILL----KGLCDAG 381
K+G DEA + + +EM+K +P RV+ L+ K L AG
Sbjct: 579 KEGRADEAFK-LYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAG 620
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 221/509 (43%), Gaps = 52/509 (10%)
Query: 9 LTP--TY--LSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGI--LSESNRIT 62
+TP TY LSQ I + P + L F K ++ N + A +I I L E+ +
Sbjct: 54 ITPHVTYRVLSQPILQ---PHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFA 110
Query: 63 EMKEVIDQMKGDS-CECKDSVFATAI----------------RTYARAGQLNEAVSLFKN 105
MK +++ + DS EC S + R + +E + ++
Sbjct: 111 TMKSILNGLVTDSDIECPVSSIVDLVDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDY 170
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + V +S LL + + +++ F R + + R+QSL L++DVLC+
Sbjct: 171 VEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRG 230
Query: 166 RSDLALHVFQEMDFQGCY-PDRESYHILM---------KGLCNDRRLNEATHLLYSMFWR 215
+ A + EM +G P+ +Y+ L+ KG+ +L E +++S
Sbjct: 231 EVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS---- 286
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ Y L+ G I++A +I E++ K ++ + G
Sbjct: 287 ---------VATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLG- 336
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+++ A +L +E R +P+ +Y A+ + G++ + +L EM++KG +LV++
Sbjct: 337 NMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFN 396
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + G +DEAL ++ M K V YNIL GLC A L M +
Sbjct: 397 TTMDGYCRRGKMDEALR-LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVE 455
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G N T+ + ++ C++G EA R+ +M + P + TYN LI C K
Sbjct: 456 K-GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A EMI++ LPD+ +SSL+ C
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGEC 543
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 191/446 (42%), Gaps = 70/446 (15%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFA--TAIRTYARAGQLNEAVSLFKNLSQ 108
+I +L + + KE++D+M G K +VF T + Y + K + +
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGI-VKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEK 280
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV------LC 162
V +++ L++ +E A +F ++ N+ MDV +
Sbjct: 281 EQVVFSVATYSILIQWYSSSGDIEEAEKIF----------EEMREKNIEMDVYVYSSMIS 330
Query: 163 QCRR---SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
RR A +F EM + P+ +Y L+ G+C ++ A LL M K
Sbjct: 331 WSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEM----QSK 386
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDI 277
G ++VI+ T + C +GK+ +A+++ + +KG+ A + + LC + ++
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDE- 445
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
AK ++N + +G P++ +++ M I++Y EG + E +++ +M KG P+++ Y
Sbjct: 446 --AKCILNSMVEKGVKPNVVTFT-MFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNT 502
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ A K V +A + I+ EM+ +P +
Sbjct: 503 LIDAYCKKEKVKQAHK-IKSEMINKGLLPDLY---------------------------- 533
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
TY L+ G C GR EA ++ EM ++ V TY +I GL G+ E
Sbjct: 534 --------TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADE 585
Query: 457 AVMWLEEMISQAKLPDISVWSSLVAS 482
A +EM+ +PD V++SLV S
Sbjct: 586 AFKLYDEMMKIGLIPDDRVFTSLVGS 611
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 208/484 (42%), Gaps = 56/484 (11%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAK-EKYPNYRHNGPVYASMIGILSESNRITE 63
WPR LTP S+++ + +P A+ F+ A P PV+A+++ L+ +
Sbjct: 62 WPRRLTPRSFSRLLLRLPTPQLAVLAFRHALFRATPPLPPTIPVFAAVLSRLAGAPP-DL 120
Query: 64 MKEVIDQMKGDSCEC-KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ V+ ++ D F +R ++ LF +L FN +SFN LL
Sbjct: 121 LPPVLSALRAAHLPAFSDRAFLPLLRALPPL----PSLRLFLSLPSFNSHPSVRSFNALL 176
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+V +L A LF + + + S N+L+ L R D AL V EM G
Sbjct: 177 HSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGI 236
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD +Y ++ C L A L F I G D+ +Y L+ C GKIQ
Sbjct: 237 VPDVVTYTTVLSAYCAKEDLKGAQKL----FDDIIAGGRVPDVTMYTVLIDGYCRTGKIQ 292
Query: 243 DAMQILEKILRKGLKAPKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
DA +I++++ G++ P + I+ C C +G+ E A +L+ E L G P +
Sbjct: 293 DAARIMDEMEAAGVQ-PNEVTYSVVIEAC-CKEGKSAE-ACNLMREMLGAGHTPD-TPLA 348
Query: 301 AMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
A +D+ +G+ E ++ M K P + + L K GMV EA ++ +E+
Sbjct: 349 AKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREARKLF-DELE 407
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG + P++ YN L+ GLC+ NGE
Sbjct: 408 KG-YKPSLLTYNSLISGLCE----------------------NGE--------------L 430
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA +V ++M+ R Y P TY LI+G C IGK E EM+++ P ++ L
Sbjct: 431 QEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVL 490
Query: 480 VASV 483
V S+
Sbjct: 491 VDSL 494
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 47/303 (15%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
PD S +IL+KGL R L+ A +L M W G D+V Y T+L A C +
Sbjct: 203 PDLVSCNILLKGLVGVRDLDAALKVLDEMPGW-----GIVPDVVTYTTVLSAYCAK---- 253
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
ED++GA+ L ++ + G +P + Y+ +
Sbjct: 254 --------------------------------EDLKGAQKLFDDIIAGGRVPDVTMYTVL 281
Query: 303 AIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
ID Y G+I + +++DEM G P+ V Y + A K+G EA ++ E M+
Sbjct: 282 -IDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMRE-MLGA 339
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P + ++ +C G + A + M K+ + L+ LC+ G E
Sbjct: 340 GHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKK-NVPPDNTITNTLIYWLCKSGMVRE 398
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A ++ +E L + Y P + TYN LI GLC G+ EA ++M+ + P+ + +L+
Sbjct: 399 ARKLFDE-LEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIK 457
Query: 482 SVC 484
C
Sbjct: 458 GFC 460
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
NILLKGL + A+ L +M G V + TY ++ C A ++ ++++
Sbjct: 209 NILLKGLVGVRDLDAALKVLDEMPGW-GIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDII 267
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
P V Y VLI G C GK +A ++EM + P+ +S ++ + C
Sbjct: 268 AGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSA 327
Query: 491 NVCRKTLEQLSS 502
C E L +
Sbjct: 328 EACNLMREMLGA 339
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 205/485 (42%), Gaps = 69/485 (14%)
Query: 5 WPRL------LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSE 57
W +L LTP + I+ K QK + +L+ F + + P+ H ++ ++ IL++
Sbjct: 47 WKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPS-SHTLETHSMILHILTK 105
Query: 58 SNRITEMKEVIDQM--KG----------------DSCECKDSVFATAIRTYARAGQLNEA 99
+ + + ++ + KG C+ VF + +T A + A
Sbjct: 106 NRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNA 165
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
F + + + +S N L ++ +++ A + F + + + + N++M
Sbjct: 166 TDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIA-LAFYKEMRRCRISPNVYTRNMVMR 224
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + + A+ VF+EM+ G P+ SY+ L+ G C LN A L SM K
Sbjct: 225 AFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSM----RAK 280
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G ++V + +L+ C +GK+ +A ++ ++
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEM---------------------------- 312
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
++N A P+ +Y+ + G G ++ +EM G ++ Y A +
Sbjct: 313 --KVLNVA------PNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALIL 364
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K+G +A +++E + K VP ++ L+ G C NS A K M + +GC
Sbjct: 365 GLCKEGKTKKAAYMVKE-LDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVR-IGC 422
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N +T+ +LV C++ F A VL EM R + P + + + GLC GK++ A+
Sbjct: 423 HPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMK 482
Query: 460 WLEEM 464
E+
Sbjct: 483 LSSEL 487
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G +P++ S +A L + R+ EMR P++ + A K G +++A
Sbjct: 176 GFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKA 235
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGI 408
++V EE M P YN L+ G C G NSAV LK + G AN T+
Sbjct: 236 VQVFEE-MESVGISPNDTSYNTLIMGYCRKGLLNSAVK---LKNSMRAKGVEANVVTFNS 291
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+DG C++G+ EAS+V EM + + P TYN LI G +G EEM
Sbjct: 292 LIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNG 351
Query: 469 KLPDISVWSSLVASVC 484
DI +++L+ +C
Sbjct: 352 VKADILTYNALILGLC 367
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 193/469 (41%), Gaps = 37/469 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + R ++D M+ + E + I + + A L
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + N S+NTL+ E K+ A +F +K + + L+D C+
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIF-NQMLRQSLKPSVATYTALIDGYCR 381
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL--------------L 209
R+D A V EM G P +Y L+ G C +L A L +
Sbjct: 382 NGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTM 441
Query: 210 YSM----FWRISQ-------------KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
Y++ F ++ + G D++ Y L+ +C G I + +IL ++
Sbjct: 442 YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 501
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAIDLYNEGR 311
+ G+ + C G E K ++ + R G + + ++A+ Y EG
Sbjct: 502 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD--IYRSGLVANSVIHNALLCSFYREGM 559
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I E ++ M + + + + + G V EA V + MV+ + P + Y
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDN-MVRHGWPPDICTYG 618
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
LL+GLC G+ A ++ + ++ C + +T L+ G+C+ G EA + E+M+
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEK-ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
R+ P TY +L+ G C GK A++ L+ M+ + +PD ++ L+
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 202/447 (45%), Gaps = 45/447 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y + IL ++ ++ V+ + C ++F++ +RT +R N LF
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSC-SAIFSSLLRTISRCDPTN----LF--- 161
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL--EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
S + L+ VKE K+ AA I F+ C G+ K+ + S N +++ L
Sbjct: 162 ----------SVDLLVNAYVKEGKVLDAAAAIFFMDEC-GF--KASLFSCNNILNALVGI 208
Query: 165 RRSDLA-LHVFQEMDFQGCYP-DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+S+ L + + +D + +P D + +I++ LC +L++A +L M +
Sbjct: 209 NKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-----KNCRL 261
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP-KSRRHRID-LCPCNDGEDIEGA 280
+ V Y T+L +G+ + A++IL+ + + G++A + ID LC A
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSAR---A 318
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L+ P SY+ + + EG+I + ++M + PS+ Y A +
Sbjct: 319 YLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA---GNSAVAVMYLKKMSKQV 397
++G DEA V+ E + G P+ Y+ LL G C G + + YL+ S +
Sbjct: 379 YCRNGRTDEARRVLYEMQITGV-RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI 437
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
N Y IL+DG C+ G +A ++L+ ML P V TY+ LI G+C +G +E
Sbjct: 438 ----NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHET 493
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
L M LP+ ++++LV C
Sbjct: 494 KEILSRMQKSGVLPNNVLYTTLVFYFC 520
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 203/531 (38%), Gaps = 90/531 (16%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + + I E KE++ +M+ + ++ T + + +AG EA+ F ++
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 535
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V + N LL +E + A F + ++ + S N ++D CQ
Sbjct: 536 YRSGLVANSVIHNALLCSFYREGMIAEAE-QFKQYMSRMKISFDVASFNCIIDSYCQRGN 594
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL---------------LYS 211
A V+ M G PD +Y L++GLC L +A L +
Sbjct: 595 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 654
Query: 212 MFWRISQKGSGE----------------DIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ I + G+ + D Y LL C +GK+ A+ +L+ +L KG
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 714
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVE 314
L P + + L + ++ A + E + + G+ +Y++M G+I E
Sbjct: 715 L-VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++++ M +PS Y + K G + L + +MVK P Y +L+
Sbjct: 774 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL-YLYRDMVKEGIKPDNVTYRLLI 832
Query: 375 KGLCDAGNSAVAVMYLKKMS---------------------------------------- 394
GLC+ G +AV +L+KM
Sbjct: 833 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDI 892
Query: 395 ----------KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
K +G V + +V GLC+ G+ EA V ++ P + T+ L
Sbjct: 893 DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 952
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC-----CNTADL 490
+ GLC K +A + M S D+ ++ L+ +C C+ DL
Sbjct: 953 MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 1003
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 202/517 (39%), Gaps = 97/517 (18%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I +I + +QM S + + + I Y R G+ +EA + +
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAH--ILFLRSCYGWEVKSRIQSLN-----LLMDV 160
+++ LL K SKL A I +LRS R S+N +L+D
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS--------RSISINRTMYTILIDG 448
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
CQ A + + M G PD +Y L+ G+C ++E +L R+ + G
Sbjct: 449 FCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL----SRMQKSG 504
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ V+Y TL+F C G ++A++ I R GL A S H LC I A
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVA-NSVIHNALLCSFYREGMIAEA 563
Query: 281 KSLINEALIRGGIP-SLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMY---- 334
+ + + R I +AS++ + ID Y G ++E V D M G+ P + Y
Sbjct: 564 EQF-KQYMSRMKISFDVASFNCI-IDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 621
Query: 335 ----------EAK---------------------LAALFKDGMVDEALEVIEEEMVKGTF 363
+AK L + K G +DEAL++ E+ MV
Sbjct: 622 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK-MVTRNI 680
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P Y ILL G C G A++ L+ M ++ G V + Y L++GL +G+ AS
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEK-GLVPDTIAYTCLLNGLVNEGQVKAAS 739
Query: 424 RVLEEMLIRS------------------------------------YWPCVETYNVLIRG 447
+ +E++ + +P +YN+L+ G
Sbjct: 740 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 799
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ + +M+ + PD + L+ +C
Sbjct: 800 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 836
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 192/484 (39%), Gaps = 76/484 (15%)
Query: 33 EAKEKYPN-YRHNGP----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA Y N RH P Y S++ L + + + KE + + +C + T +
Sbjct: 597 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 656
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G L+EA+ L + + N + T ++ LL K K+ A IL V
Sbjct: 657 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 716
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQE------------------------------- 176
I + L++ L + A ++FQE
Sbjct: 717 PDTI-AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 775
Query: 177 -----MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
M YP SY+ILM G +L+ +L M ++G D V YR L
Sbjct: 776 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV----KEGIKPDNVTYRLL 831
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI----EGAKSLINEA 287
+F LC+ G I+ A++ LEK++ +G+ P N DI KS ++ A
Sbjct: 832 IFGLCEYGLIEIAVKFLEKMVLEGV------------FPDNLAFDILIKAFSEKSKMSNA 879
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
L L SY G I ++ ++M+ G PS V + + L K G V
Sbjct: 880 L------QLFSYMKWV------GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKV 927
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+EA+ V M G VPT+ + L+ GLC A +LK++ + G + TY
Sbjct: 928 EEAIIVFSSIMRAG-MVPTIATFTTLMHGLCKEFKIDDA-FHLKQLMESCGLKVDVVTYN 985
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L+ GLC +A + EEM + P + TY L + + G + L+++ +
Sbjct: 986 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045
Query: 468 AKLP 471
+P
Sbjct: 1046 GIVP 1049
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 163/404 (40%), Gaps = 45/404 (11%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRI 151
AG L A S+ S V Q + TL + K KL+ AH L LR
Sbjct: 45 AGVLPAATSVHGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALR----------- 93
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL--- 208
++D + Q D H++ C + HIL++ + ++ HL
Sbjct: 94 -----MLDSIVQQSGLDRITHIY-------CM----AVHILVQAQMPSQAMSVLRHLALT 137
Query: 209 ------LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
++S R + ++ L+ A +GK+ DA + + G KA
Sbjct: 138 GFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFS 197
Query: 263 RHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I L N E + + E+L R + + + + L +G++ + + +L
Sbjct: 198 CNNILNALVGINKSEYVW---LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ 254
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M+ P+ V Y L K G AL ++ ++M K + YNI++ LC
Sbjct: 255 KMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL-DDMEKNGIEADLYTYNIMIDKLCKL 312
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
SA A + LK+M ++V + +Y L+ G +G+ A + +ML +S P V T
Sbjct: 313 KRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVAT 371
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y LI G C G+ EA L EM P +S+L+ C
Sbjct: 372 YTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYC 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L +L G + +A ++++ +K +P YN +L G A+ L M K
Sbjct: 237 LNSLCTQGKLSKAESMLQK--MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKN- 293
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G A+ TY I++D LC+ R A +L+ M + P +YN LI G GK A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ +M+ Q+ P ++ +++L+ C N
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRN 382
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 171/410 (41%), Gaps = 45/410 (10%)
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
F NW N ++ +L A L+L G K LM LC+ +
Sbjct: 59 FTLPNWRSGKN---DPRTRDLRLNDA-FLYLEYMIGKGHKPDGGQATQLMYELCKSNKMR 114
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
A V + M G PD S L+ LC + A L+ M + G + V Y
Sbjct: 115 KATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKM----EEYGYPTNTVTY 170
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
+L+ LC G + ++QIL+K ++KGL P + L + A L++E +
Sbjct: 171 NSLVRGLCMHGNLSQSLQILDKFMKKGL-VPNVFTYSFLLEAAYKERGADEAIRLLDEIV 229
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+GG P+L SY+ + L EGR E + ++ +KGF P++V Y L +L +G +
Sbjct: 230 AKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWE 289
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A E++ EM G P++ +NIL+ L G + A+ L MS+ A +Y
Sbjct: 290 KAKELL-AEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSR-ARFKATAASYNP 347
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL------------------------ 444
++ LC++G+ + L++M+ R P TYN +
Sbjct: 348 IIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQN 407
Query: 445 ----------IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
I LC G Y A L EM +PD +SSL+ +C
Sbjct: 408 SSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLC 457
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 204/443 (46%), Gaps = 9/443 (2%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ +G ++ L +SN++ + +V++ M G + + + G + A+
Sbjct: 93 HKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAM 152
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + ++ T ++N+L++ + L + + L + + + + L++
Sbjct: 153 QLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQS-LQILDKFMKKGLVPNVFTYSFLLEA 211
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ R +D A+ + E+ +G P+ SY++L+ GLC + R EA F + KG
Sbjct: 212 AYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQF----FRDLPSKG 267
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
++V Y LL +LC +G+ + A ++L + + G ++P I + + A
Sbjct: 268 FSPNVVSYNILLRSLCYEGRWEKAKELLAE-MDGGERSPSIVTFNILIGSLALHGQTDQA 326
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++++ + ASY+ + L EG++ K LD+M + P+ Y A +A
Sbjct: 327 LEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAV 385
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L ++G V EA +I+ K T Y ++ LC GN+ A L +M+K G V
Sbjct: 386 LCEEGKVQEAFSIIQSLGNKQN-SSTHDFYKGVISSLCRKGNTYPAFQLLYEMTK-YGFV 443
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ TY L+ GLC +G EA + M P V+ +N LI GLC K ++M
Sbjct: 444 PDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMV 503
Query: 461 LEEMISQAKLPDISVWSSLVASV 483
E M+ + +P+ + ++ +V +
Sbjct: 504 FEMMVKKGYMPNETTYTIIVEGI 526
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 187/408 (45%), Gaps = 56/408 (13%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++++M+ + + +R G L++++ + + V +++ LL+
Sbjct: 153 QLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAA 212
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KE + A I L K + S N+L+ LC+ R++ A+ F+++ +G P+
Sbjct: 213 YKERGADEA-IRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPN 271
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE---DIVIYRTLLFALCDQGKIQ 242
SY+IL++ LC + R +A LL M GE IV + L+ +L G+
Sbjct: 272 VVSYNILLRSLCYEGRWEKAKELLAEM-------DGGERSPSIVTFNILIGSLALHGQTD 324
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
A+++L+ + R KA + + I C +G+ ++ +++ + R P+ +Y+A+
Sbjct: 325 QALEVLDDMSRARFKATAASYNPIIARLCKEGK-VDLVVKCLDQMMYRRCNPNEGTYNAI 383
Query: 303 AIDLYNEGRIVE--------GDK---------------------------VLDEMRTKGF 327
A+ L EG++ E G+K +L EM GF
Sbjct: 384 AV-LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
P Y + + L +GM+DEA+E+ +EE + P V +N L+ GLC +
Sbjct: 443 VPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCR----PDVDNFNALILGLCKCRKTD 498
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+++M + M K+ G + N TY I+V+G+ A+ VL+E+ +R
Sbjct: 499 LSLMVFEMMVKK-GYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLR 545
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 52 IGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
I +L E ++ E +I + + I + R G A L ++++
Sbjct: 383 IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
V + ++++L++ + E L+ A +F + Y + + + N L+ LC+CR++DL
Sbjct: 443 VPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENY---CRPDVDNFNALILGLCKCRKTDL 499
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L VF+ M +G P+ +Y I+++G+ + + A +L ++ R
Sbjct: 500 SLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLR 545
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 175/388 (45%), Gaps = 8/388 (2%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+++ VS F L F +L +VK A I R ++ + +LN
Sbjct: 46 VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTA-ISLSRQMEVKGIEPNLVTLN 104
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ C + + V ++ G PD + + LMKGLC + + H +
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHF----HDK 160
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ +G + V Y TLL LC G+ + A+++L I + + I C D +
Sbjct: 161 VVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKD-K 219
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ A +E RG P++ +YS + G+++ +L+EM K P++ Y
Sbjct: 220 IVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYN 279
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ AL K+G V EA +++ E KG V YN +L GLC + N A KM K
Sbjct: 280 ILIDALCKEGKVKEAKKLLAEMHHKGQPADVV-TYNSVLDGLCKSQNLDKATALFMKM-K 337
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G N TY L+DGLC+ GR A ++ + +L++ V TYNV+I GLC G
Sbjct: 338 KWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFD 397
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASV 483
+A+ +M +P+ + ++ S+
Sbjct: 398 KALAMKSKMEDNGCIPNAVTFDIIIRSL 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 183/431 (42%), Gaps = 45/431 (10%)
Query: 42 RHNGPV--YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
RH P+ + ++G L + + QM+ E I + GQ+ +
Sbjct: 60 RHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFS 119
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
S+ + + T + NTL+K + + +++ + + F + S L++
Sbjct: 120 FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRS-LHFHDKVVAQGFQMNQVSYGTLLN 178
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ + A+ + + ++ + PD Y ++ GLC D+ +N+A Y F ++ +
Sbjct: 179 GLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA----YDFFSEMNAR 234
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G +++ Y TL++ C G++ G
Sbjct: 235 GIFPNVITYSTLIWGFCLAGQLM------------------------------------G 258
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A SL+NE +++ P++ +Y+ + L EG++ E K+L EM KG +V Y + L
Sbjct: 259 AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLD 318
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K +D+A + + M K P Y L+ GLC G A + + + GC
Sbjct: 319 GLCKSQNLDKATALFMK-MKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK-GC 376
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ TY +++ GLC++G F +A + +M P T++++IR L + +A
Sbjct: 377 CIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEK 436
Query: 460 WLEEMISQAKL 470
L MI++ L
Sbjct: 437 LLHGMIAKGLL 447
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 149/328 (45%), Gaps = 7/328 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++ L + + A+ + ++M+ +G P+ + +IL+ C+ ++ + +S+ +I
Sbjct: 71 ILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFS----FSVLGKI 126
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ G D + TL+ LC +G+++ ++ +K++ +G + + + C GE
Sbjct: 127 LKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET 186
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A L+ R P + YS + L + + + EM +G +P+++ Y
Sbjct: 187 -RCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYST 245
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ G + A ++ E ++K P V YNIL+ LC G A L +M +
Sbjct: 246 LIWGFCLAGQLMGAFSLLNEMILK-NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
G A+ TY ++DGLC+ +A+ + +M P TY LI GLC G+
Sbjct: 305 -GQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKN 363
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A + ++ + D+ ++ +++ +C
Sbjct: 364 AQKLFQHLLVKGCCIDVRTYNVMISGLC 391
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N N Y +I L + ++ E K+++ +M + + + ++ L++A
Sbjct: 270 NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKA 329
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLN 155
+LF + ++ ++ L+ + K +L+ A LF ++ C +++ N
Sbjct: 330 TALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCC-----IDVRTYN 384
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+++ LC+ D AL + +M+ GC P+ ++ I+++ L ++A LL+ M +
Sbjct: 385 VMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAK 444
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 206/482 (42%), Gaps = 33/482 (6%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ T + Q ++ ++P AL F+ + K + HN Y MI IL S + + +
Sbjct: 186 LSKTTVLQTLQLIRTPAKALHFFRWVEAK--GFTHNEQSYFLMIEILGRSRNLNAARNFV 243
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
++ S E++ +FK + + +FN+LL ++K
Sbjct: 244 FSIEKKSGGA-------------------ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKR 284
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ A LF + V + N+L+ C D F+EM C PD +
Sbjct: 285 GRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVT 344
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y+ L+ GLC ++ A +++ M + ++V Y TL+ C + + +A+ +L
Sbjct: 345 YNTLVDGLCRAGKVKIAHNVVKGMVKK--SPNLSPNVVTYTTLIRGYCMKQDMAEALSLL 402
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG-IPSLASYSAMAIDLY 307
+++ +GLK K + + C + + ++ K ++ + GG IP + + +
Sbjct: 403 AEMVSRGLKPNKITYNTLIQGLC-EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHC 461
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV--- 364
G++ E V ++M P Y + +L + G A E +E K +
Sbjct: 462 TMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDV 521
Query: 365 ---PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V YN + + LC G + A +++ K+ + +Y L+ G CR+G
Sbjct: 522 GCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKR--GTQDPPSYKTLILGHCREGTPEA 579
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+L ML R + P ETY ++I GL G A LE+M+ + LP +++ S++A
Sbjct: 580 GFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 639
Query: 482 SV 483
++
Sbjct: 640 AL 641
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 220/514 (42%), Gaps = 73/514 (14%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
I+K+ ++K+FK KE + + S++ I+ + R + K++ D+M
Sbjct: 246 IEKKSGGAESIKVFKTMKEI--GVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGV 303
Query: 78 CKDS-VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
D+ F IR + ++E FK +S+F C ++NTL+ + + K++ AH
Sbjct: 304 TPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHN 363
Query: 137 LFLRSCYGWEVKSRIQSLNLLMD---VLCQCRRSDLA--LHVFQEMDFQGCYPDRESYHI 191
+ G KS S N++ + C + D+A L + EM +G P++ +Y+
Sbjct: 364 V----VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 419
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L++GLC ++L++ +L M + G D TL+ A C GK+++A + EK+
Sbjct: 420 LIQGLCEAQKLDKIKEILEGM---VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 476
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR-------GGIPSLASYSAMAI 304
++ + + C G D A+ +E + G P +A+Y+ M
Sbjct: 477 SELRVQPDSATYSVLVRSLCQRG-DFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 535
Query: 305 DLYNEGRIVEGDKVLDEMRTKGF-----WPSLVM------------------------YE 335
L + G+ + ++V ++ +G + +L++ +
Sbjct: 536 YLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 595
Query: 336 AKLAALFKDGMVDEALEVIE----EEMVKGTFVPTVRVYNILLKGLC----------DAG 381
A+ L DG++ + V+ E+M+K + +PT +++ +L L D
Sbjct: 596 AETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRIRQNIDLS 655
Query: 382 NSAVAVMYLKKMSKQ----VGCV-ANGETYGI--LVDGLCRDGRFLEASRVLEEMLIRSY 434
V ++Y + + +G + NG + LV LC+ + LEA ++L L +
Sbjct: 656 THTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQ 715
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++ + +I GLC K EA E++ +
Sbjct: 716 SVDIDMCSTVISGLCKAHKVSEAFALYYELVEKG 749
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 28/395 (7%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL------NLLMDVLCQCRRSDLALH 172
N LK K + +A L + E++S + L ++ L R ALH
Sbjct: 147 NEGLKAATKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH 206
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------FWRISQKG 220
F+ ++ +G + +SY ++++ L R LN A + ++S+ F + + G
Sbjct: 207 FFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIG 266
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+V + +LL + +G+ A Q+ +++L P + I + ++
Sbjct: 267 VSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEG 326
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM--RTKGFWPSLVMYEAKL 338
E P + +Y+ + L G++ V+ M ++ P++V Y +
Sbjct: 327 FWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLI 386
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ EAL ++ E MV P YN L++GLC+A L+ M G
Sbjct: 387 RGYCMKQDMAEALSLLAE-MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGG 445
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ + T L+ C G+ EA V E+M P TY+VL+R LC G A
Sbjct: 446 FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 505
Query: 459 MWLEEMISQAKL-------PDISVWSSLVASVCCN 486
+ +E+ + L P ++ ++ + +C N
Sbjct: 506 EFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 540
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 165/379 (43%), Gaps = 45/379 (11%)
Query: 116 QSFNTLLKEMVKESKLEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+S N L + ++S A RS G V + + +L+ C+ R DL
Sbjct: 62 RSLNRALAAVARDSPAAAVSGFNRMARSSDGA-VTPTLHTYGILIGCCCRAGRLDLGFAG 120
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+ +G + + L+K LC ++R + A +++ R+++ G + Y LL
Sbjct: 121 LGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIV---LRRMTELGCAPHVFSYNILLK 177
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC + + Q+A+++L + G P
Sbjct: 178 GLCHESRSQEALELLHMMADDGGDCP---------------------------------- 203
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
P + SYS + L+ EG + EM +G P +V Y +AAL K +D+A++V
Sbjct: 204 PDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDV 263
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
+ MVK +P YN ++ G C +G S A+ L+KM G + TY L+D L
Sbjct: 264 LNR-MVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSD-GVEPDAVTYTSLMDYL 321
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C++GR +EA ++L+ M+ R P V TY+ L+ G + G E L+ M+ PD
Sbjct: 322 CKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDR 381
Query: 474 SVWSSLVASVCCNTADLNV 492
V+S L +C T NV
Sbjct: 382 HVFSIL---ICACTKHQNV 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 39/318 (12%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G+ V+ I L+ LC +R+ A++ V + M GC P SY+IL+KGLC++ R
Sbjct: 128 GYRVEPII--FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRS 185
Query: 203 NEATHLL---------------------------------YSMFWRISQKGSGEDIVIYR 229
EA LL YS + + ++G D+V Y
Sbjct: 186 QEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYN 245
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
T++ ALC + AM +L ++++ G+ + I C+ G+ E A ++ +
Sbjct: 246 TIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKE-AIGILEKMCS 304
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
G P +Y+++ L GR +E K+LD M +G P+++ Y L G + E
Sbjct: 305 DGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVE 364
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+++ + MV+ P V++IL+ N VA+ KM +Q + TYG L
Sbjct: 365 MRDLL-DLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQR-LTPDVVTYGTL 422
Query: 410 VDGLCRDGRFLEASRVLE 427
+DGLC+ GR +A LE
Sbjct: 423 IDGLCKSGRVDDAMLNLE 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 46/318 (14%)
Query: 78 CKDSVFATAI--RTYARAGQLNEAVSLFKNLSQ--FNCVNWTQSFNTLLKEMVKESKLEA 133
C VF+ I + + EA+ L ++ +C S++T++ + KE +
Sbjct: 165 CAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDK 224
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
A+ + + + + N ++ LC+ + D A+ V M G PD +Y+ ++
Sbjct: 225 AYSTY-HEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIV 283
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
G C+ + EA +L M G D V Y +L+ LC G+ +A +IL+ +++
Sbjct: 284 HGYCSSGQSKEAIGILEKM----CSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIK 339
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
+GLK P++ +YS + +G +V
Sbjct: 340 RGLK------------------------------------PNVITYSTLLHGYATKGALV 363
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +LD M G P ++ + A K VD A+ V +M + P V Y L
Sbjct: 364 EMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVF-SKMRQQRLTPDVVTYGTL 422
Query: 374 LKGLCDAGNSAVAVMYLK 391
+ GLC +G A++ L+
Sbjct: 423 IDGLCKSGRVDDAMLNLE 440
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 188/437 (43%), Gaps = 24/437 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L + RI E + Q+ E +++ I + + G L +L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ + + L+ + K+ + A + F G ++ + N L+D C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D AL VF+ M G PD ++ +M+ + RL EA L + MF + G
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF----KMGLEP 564
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN-------DGED 276
D + Y TL+ A C K +Q+ + + R + A D+ CN
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA--------DIAVCNVVIHLLFKCHR 616
Query: 277 IEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
IE A N LI G + P + +Y+ M + R+ E +++ + ++ F P+ V
Sbjct: 617 IEDASKFFNN-LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ L K+ +D A+ + KG+ P Y L+ + + + ++M +
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + +Y I++DGLC+ GR EA+ + + + P V Y +LIRG C +G+
Sbjct: 735 K-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 456 EAVMWLEEMISQAKLPD 472
EA + E M+ PD
Sbjct: 794 EAALLYEHMLRNGVKPD 810
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 174/430 (40%), Gaps = 45/430 (10%)
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
KD F T R G + A +F + N + FN L +++ L+A F
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEM----ITNRGKDFNVL--GSIRDRSLDADVCKF 151
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
L C C+ D AL +F G ++S + ++ L
Sbjct: 152 LMEC------------------CCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 199 DRRLNEATHLLYSMFWRISQKG-SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
R++ L+ F ++ + G + + +L AL +G++ A+ ++ +G
Sbjct: 194 SDRVD----LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGF- 248
Query: 258 APKSRRHRIDLCPCN------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
R+ + CN + IE A L++ L G P++ ++ + G
Sbjct: 249 -------RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ + M +G P L+ Y + FK GM+ ++ + + KG + V V++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV-VFS 360
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+ +G+ A A + K+M Q G N TY IL+ GLC+DGR EA + ++L
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
R P + TY+ LI G C G E+MI PD+ ++ LV + L+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 492 VCRKTLEQLS 501
R +++ L
Sbjct: 480 AMRFSVKMLG 489
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 188/438 (42%), Gaps = 51/438 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L ++ RI+ E + M E + T + + G++ +A SLF ++
Sbjct: 47 TYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSM 102
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ TL+ K + E A+ L L+ + + S +++ LC+ R+
Sbjct: 103 EGAGITPSDVTYTTLIDVFCKMCQFETAYGL-LQLMASRKCSPTVYSYCSIINGLCKNRK 161
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F+EM GC PDR +Y+ L+ GLC +RL+EA LL M Q D +
Sbjct: 162 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQ----PDKI 217
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ LC +I++A + + + ++G AP H + L+++
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGC-APDLVTHTV----------------LVSK 260
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
IR + P+L+ +V E ++++Y L +
Sbjct: 261 LCIRRKLRPALS--------------VVRNYPACPE--------AVILYTPIFRELGRRR 298
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
D A ++++ M + P V Y KGL D A ++M +Q G +
Sbjct: 299 GFDRAARLLQK-MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ-GIEPDMVA 356
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y +LVDG C+ R A +++ M P + TYN L+ C GK L M+
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416
Query: 466 SQAKLPDISVWSSLVASV 483
S+ + PD++ WS+LVA +
Sbjct: 417 SRGRQPDVATWSTLVAGL 434
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 147/375 (39%), Gaps = 44/375 (11%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ + K S L+ LC+ + D A EM + PD +Y++++ LC RR+
Sbjct: 2 FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A +M D+V Y TLL LC G++ A + + G+
Sbjct: 62 SRAIEFFETM--------PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVT 113
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C + E A L+ R P++ SY ++ L ++ + ++ +EM
Sbjct: 114 YTTLIDVFCKMCQ-FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 172
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ G P V Y + L + EA +++ MV+ +F P + L++GLC
Sbjct: 173 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL-TVMVENSFQPDKITFTALIEGLCTTDR 231
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLC---------------------------- 414
A + + M+KQ GC + T+ +LV LC
Sbjct: 232 IKEAFVLFQGMAKQ-GCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPI 290
Query: 415 -----RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
R F A+R+L++M R P V TY +GL + A M+ Q
Sbjct: 291 FRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGI 350
Query: 470 LPDISVWSSLVASVC 484
PD+ ++ LV C
Sbjct: 351 EPDMVAYNVLVDGFC 365
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 174/444 (39%), Gaps = 51/444 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N Y ++ L + +I + I +M + + I T +A +++ A+
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
F+ + + + V ++NTLL + K ++ A LF S G + + L+DV
Sbjct: 67 FFETMPEPDVV----TYNTLLGGLCKNGRVAQACSLF-GSMEGAGITPSDVTYTTLIDVF 121
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + + A + Q M + C P SY ++ GLC +R++++A Y +F + G
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA----YQLFEEMKLAGC 177
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V Y TL+ LC + ++ +A +L ++ +
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQ------------------------ 213
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
P +++A+ L RI E + M +G P LV + ++ L
Sbjct: 214 ------------PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL 261
Query: 342 FKDGMVDEALEVIEEEMVKGTFVP-TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ AL V+ P V +Y + + L A L+KM+++ G
Sbjct: 262 CIRRKLRPALSVVRNYPA----CPEAVILYTPIFRELGRRRGFDRAARLLQKMARR-GVA 316
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY GL + A R ML + P + YNVL+ G C + A
Sbjct: 317 PNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKM 376
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+ M P+I +++LV C
Sbjct: 377 VRYMDQSGLPPNIVTYNTLVGHHC 400
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 150/378 (39%), Gaps = 64/378 (16%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++G L ++ R+ + + M+G D + T I + + Q A L + +
Sbjct: 78 TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLM 137
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSC-----------YGWEVKSRI 151
+ C S+ +++ + K K++ A+ LF L C +G VK R+
Sbjct: 138 ASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRL 197
Query: 152 Q-------------------SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ L++ LC R A +FQ M QGC PD ++ +L
Sbjct: 198 HEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVL 257
Query: 193 MKGLCNDRRLNEATH------------LLYSMFWR-----------------ISQKGSGE 223
+ LC R+L A +LY+ +R ++++G
Sbjct: 258 VSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAP 317
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
++V Y L D + A + ++L +G++ P + + + ++ A+ +
Sbjct: 318 NVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIE-PDMVAYNVLVDGFCKANRLDMAEKM 376
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G P++ +Y+ + +G++ ++L M ++G P + + +A LF+
Sbjct: 377 VRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFR 436
Query: 344 DGMVDEALEVIEEEMVKG 361
G VD A + M +G
Sbjct: 437 VGQVDAAYSFLNLAMSQG 454
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P+ + Y + AL + G +D+A I E M + VP V YN+++ LC A + A+
Sbjct: 8 PNALSYCYLVKALCRTGKIDKACSTIAE-MAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ + M + + TY L+ GLC++GR +A + M P TY LI
Sbjct: 67 FFETMPE-----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C + + A L+ M S+ P + + S++ +C N
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKN 159
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
C N +Y LV LCR G+ +A + EM P V TYNV+I LC + A+
Sbjct: 6 CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65
Query: 459 MWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
+ E M PD+ +++L+ +C N C
Sbjct: 66 EFFETMPE----PDVVTYNTLLGGLCKNGRVAQAC 96
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 190/459 (41%), Gaps = 63/459 (13%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF-- 103
P+Y+ +I L + I + ++ ++MK + + + R G A LF
Sbjct: 316 PMYSVLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIA-GLFIN 374
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE----------------- 146
+N Q FN +L+ V + EAA+ L G +
Sbjct: 375 ENARQLKPSGVIALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISE 434
Query: 147 -VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
VK S N+++ LC+ ++ D AL + ++M GC ++ L+ LC+ RL+E
Sbjct: 435 DVKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEG 494
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y MF + G Y +L + +C + A+ +L + G HR
Sbjct: 495 ----YKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNG--------HR 542
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P + + + M L GRI E + LDEM
Sbjct: 543 ----------------------------PWIKNCTEMVQQLCISGRITEALQFLDEMLKM 574
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P +V Y A + L K G VD AL + + K ++P V +NIL+ G +G +
Sbjct: 575 GFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSK-YYLPDVVAHNILINGFRISGKLSE 633
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A +++M ++ G + TY +++D C+ G +A L +M+ P V TY LI
Sbjct: 634 AQEVMEEMLEK-GLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLI 692
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLCS G+ EA+ +M+ + P+ +++ V +C
Sbjct: 693 DGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLC 731
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 160/355 (45%), Gaps = 12/355 (3%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
+ SFN ++ + K KL+ A + ++ G K ++ N L+ LC R D +F
Sbjct: 440 SDSFNIVVCGLCKVKKLDNA-LALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMF 498
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
M G P +Y+ L G+C + N A LL M G I ++
Sbjct: 499 NLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDM----RTNGHRPWIKNCTEMVQQ 554
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC G+I +A+Q L+++L+ G C GE ++ A + + + +P
Sbjct: 555 LCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGE-VDNALGIFRDISSKYYLP 613
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +++ + G++ E +V++EM KG +PS+V Y + K G +++A+ +
Sbjct: 614 DVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACL 673
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+ M+ PTV Y L+ GLC G A+ KM + GC N Y V+GLC
Sbjct: 674 NK-MIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDK-GCAPNKIAYTAFVNGLC 731
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVL--IRGLCSIGKQYEAVMWLEEMISQ 467
+ R A EEM+ + + ++T++ L I L S G + L+E++ +
Sbjct: 732 KRARVDTALTYYEEMMTKGFE--LDTFSCLYFINFLISTGNATKGCELLKEVLQK 784
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 189/450 (42%), Gaps = 61/450 (13%)
Query: 89 TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEV 147
+++ G+++ AV L + ++ + L+ K+ +L+ A +F + YG+
Sbjct: 254 AFSKWGKVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVA 313
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ S+ L++ LCQ + A+ +F+EM PD +++ C + A
Sbjct: 314 GLPMYSV--LIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGL 371
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK---------- 257
+ ++ G I ++ +L + G+ + A Q+L ++R G
Sbjct: 372 FINENARQLKPSGV---IALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAH 428
Query: 258 --------APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
P S I +C + ++ A +LI + G L ++ + +L +
Sbjct: 429 VVDISEDVKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSL 488
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA------------LFKD------------- 344
R+ EG K+ + M+ G PS Y + L +D
Sbjct: 489 DRLDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNC 548
Query: 345 ----------GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
G + EAL+ ++E M+K F+P + Y+ + GLC G A+ + +S
Sbjct: 549 TEMVQQLCISGRITEALQFLDE-MLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDIS 607
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ + + + IL++G G+ EA V+EEML + +P + TYN++I C G
Sbjct: 608 SKY-YLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNI 666
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ L +MI + + P + ++SL+ +C
Sbjct: 667 EKAIACLNKMIDEEESPTVVTYTSLIDGLC 696
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 166/352 (47%), Gaps = 17/352 (4%)
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
F + ++V + S+ +++D LC+ R + A + EM +G P+ +Y+ L+
Sbjct: 202 FFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYI 261
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC-----DQGKIQDAMQILEKIL 252
+L M D V+Y + L GKI +A ++ EK+L
Sbjct: 262 KIMDFEGVNEMLRLMEM---------DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKML 312
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+G++A I C G +++ A +L +E RG + + +Y A+ N G++
Sbjct: 313 ERGVEADIHVFTSIISWQCKLG-NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQL 371
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ +++EM+++G +LV++ + K GM+DEAL +++ M K F + YN
Sbjct: 372 DAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALR-MQDVMEKKGFENDIFTYNT 430
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
+ GLC A +L M ++ G N ++ I++D C++G +EA RV ++M +
Sbjct: 431 IAGGLCKLNRHEEAKRWLFTMVEK-GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKK 489
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TYN LI G GK EA +EM S DI +++LV C
Sbjct: 490 GEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGEC 541
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 205/472 (43%), Gaps = 57/472 (12%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGI--LSESNRITEMKEVIDQMKGDS 75
+K+ + +L FK+ E ++ + VY+ I I L + R+ K+++ +M G
Sbjct: 190 LKRSDQMVMSLGFFKKMVE----FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKG 245
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES-KLEAA 134
+ + T + Y + E V+ L + + V + + TLL E S K+ A
Sbjct: 246 IKPNVVTYNTLVNAYIKIMDF-EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEA 304
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+F V++ I ++ C+ A +F E++ +G + +Y L+
Sbjct: 305 EKVF-EKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIH 363
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G CN +L+ A L+ M +G ++VI+ TL+ C +G I +A+++ + + +K
Sbjct: 364 GTCNSGQLDAAEMLVNEM----QSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKK 419
Query: 255 GLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGR 311
G + + I LC N E+ AK + + +G P+ S++ M ID++ EG
Sbjct: 420 GFENDIFTYNTIAGGLCKLNRHEE---AKRWLFTMVEKGVDPNAVSFTIM-IDIHCKEGN 475
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+VE ++V +M+ KG P+ V YN
Sbjct: 476 LVEAERVFQDMKKKGEKPN------------------------------------VVTYN 499
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G G A LK + +G ++ TY LV G C G+ EA +L E+
Sbjct: 500 TLIDGYSKKGKLKEAYR-LKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCR 558
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+ + TY +I GL G+ EA +EM++ PD V++SLVA++
Sbjct: 559 KGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 33/332 (9%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
+N Y +I S +I E ++V ++M E VF + I + G + A +L
Sbjct: 283 YNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFAL 342
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
F L++ V ++ L+ +L+AA +L + + + N L++ C
Sbjct: 343 FDELNERGLVANAHTYGALIHGTCNSGQLDAAEML-VNEMQSQGLDMNLVIFNTLINGYC 401
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---------- 212
+ D AL + M+ +G D +Y+ + GLC R EA L++M
Sbjct: 402 KKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAV 461
Query: 213 ---------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
F + +KG ++V Y TL+ +GK+++A ++ +++
Sbjct: 462 SFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEM 521
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
G+ + + C G+ +E A +L+NE +G S+ +Y+A+ L EGR
Sbjct: 522 ESIGMTSDIYTYTTLVHGECVFGK-VEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGR 580
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E ++ DEM G P +Y + +A L K
Sbjct: 581 SEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 202/483 (41%), Gaps = 63/483 (13%)
Query: 9 LTPTYLSQI-IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
LTP + I +K +K + + + F K + PN + Y+ ++ IL+++++ + V
Sbjct: 155 LTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQ-TLETYSIILHILTKNHKFKSAESV 213
Query: 68 IDQMKGDS------------------CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+ + G C+ VF + +TYA+ +L A+ +F + +
Sbjct: 214 LKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDY 273
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ +S N + + + + A + F R + + + +LN++M C+ + +
Sbjct: 274 GFLPRVESCNAYISASISLQRGDIA-LTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEK 332
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ VF+ M+ G P SY+ L+ G CN LN L M + G D V +
Sbjct: 333 AIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILM----EKNGVRPDDVTFN 388
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
TL+ C GK+ +A +I ++ D+
Sbjct: 389 TLINGFCRGGKLHEANKIFSEM---------------------KANDV------------ 415
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+P+ +Y+ + G G ++ DEM G ++ Y A + L +G +
Sbjct: 416 ---VPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKK 472
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++E + + VP ++ L+ G C NS A K M + GC N T+ +L
Sbjct: 473 AAYLVKE-LDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRS-GCHPNYHTFKML 530
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ C++ F A V+ EM RS P +T + L RGL GK+ A+ +EM +
Sbjct: 531 ISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHL 590
Query: 470 LPD 472
+P+
Sbjct: 591 MPE 593
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 207 HLLYSMF--WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR-- 262
H+L F W +Q + + + Y +L L K + A +L+ IL G S+
Sbjct: 171 HVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLF 230
Query: 263 -----RHRI-DLCPC---------NDGEDIEGAKSLINEALIRGGIPSLAS---YSAMAI 304
+RI D PC + + A + + G +P + S Y + +I
Sbjct: 231 EAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASI 290
Query: 305 DLYNEGRIVEGDKVLD---EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
L GD L EM+ P++ + A K G +++A+EV + G
Sbjct: 291 SLQ------RGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMG 344
Query: 362 TFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
F PT+ YN L+ G C+ G NS M LK + ++ G + T+ L++G CR G+
Sbjct: 345 -FSPTITSYNTLIAGYCNKGLLNSG---MKLKILMEKNGVRPDDVTFNTLINGFCRGGKL 400
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA+++ EM P TYN LI G +G +EM+ DI +++L
Sbjct: 401 HEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNAL 460
Query: 480 VASVC 484
+ +C
Sbjct: 461 ILGLC 465
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G++ + +V M T GF P++ Y +A G+++ ++ ++ M K P
Sbjct: 328 GKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMK-LKILMEKNGVRPDDVT 386
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N L+ G C G A +M K V N TY L++G + G R+ +EM
Sbjct: 387 FNTLINGFCRGGKLHEANKIFSEM-KANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 445
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L + TYN LI GLC G+ +A ++E+ + +P+ S +S+L+ C
Sbjct: 446 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC 500
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 199/459 (43%), Gaps = 55/459 (11%)
Query: 2 SVRWPRLLTPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN 59
+++W TP +++++K+ P AL+ FK +P+Y H+ + + I +
Sbjct: 64 TIQW----TPDLVNKVMKRLWNHGP-KALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMR 118
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
++ +M+ A YA G+ + AV F ++++ SFN
Sbjct: 119 DFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFN 178
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
TLL + K ++E AH L + + N+L + C +R+ +AL V +EM
Sbjct: 179 TLLDILCKSKRVETAHSLL--KTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQ 236
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G P +Y+ ++KG ++ EA + + + ++ D+V Y T++ G
Sbjct: 237 RGIEPTMVTYNTMLKGYFRSNQIKEA----WEFYLEMKKRKCEIDVVTYTTVIHGFGVAG 292
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A ++ +++++G+ +P++A+Y
Sbjct: 293 DVKKAKRVFHEMVKEGV------------------------------------VPNVATY 316
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGF-WPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+A+ L + + V +EM +G P++V Y + L G ++ AL + E M
Sbjct: 317 NALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFM-ERM 375
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---R 415
+ V+ YN++++ CDAG A+ KM C+ N +TY +L+ + +
Sbjct: 376 GEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDG-SCLPNLDTYNVLISAMFVRKK 434
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+ A ++L +M+ R + P T+N ++ GL G Q
Sbjct: 435 SEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQ 473
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 140/304 (46%), Gaps = 19/304 (6%)
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N H F +++ G +D+ + TLL LC +++ A +L+ + +
Sbjct: 152 NGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTL---------TS 202
Query: 263 RHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
R R D N +G + A ++ E + RG P++ +Y+ M + +I E
Sbjct: 203 RFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEA 262
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM+ + +V Y + G V +A V E MVK VP V YN L++
Sbjct: 263 WEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHE-MVKEGVVPNVATYNALIQ 321
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + AV+ ++M+++ CV N TY +++ GLC G A +E M
Sbjct: 322 VLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLR 381
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCC--NTADLNVC 493
CV+TYNV+IR C G+ +A+ +M + LP++ ++ L++++ + DL V
Sbjct: 382 ACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVA 441
Query: 494 RKTL 497
K L
Sbjct: 442 GKLL 445
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 213/478 (44%), Gaps = 34/478 (7%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
LTP L + +SP AL+ F A EK N +Y+++I +L S ++ + ++
Sbjct: 28 LTPDSLITTVLNCRSPWKALEFFNAAPEK------NIQLYSAIIHVLVGSKLLSHARYLL 81
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL-FKNLSQFNCVNWTQS-FNTLLKEMV 126
+ + ++ ++ + A L F LS+ +T + + L+ +
Sbjct: 82 NDL---------------VQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLC 126
Query: 127 KESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
K +E A ++ + IQ+ N+L+ VL + R +L +++EM G P
Sbjct: 127 KMELVEEALSMY----HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSV 182
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
++ L+ G C L A MF + KG +++Y L+ LC KI++A +
Sbjct: 183 ITFGTLIDGCCRQGDLLRAQE----MFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA-E 237
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ + +R+ P + + + + A L + L G +P + ++ + L
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G + + M P++ +Y + + A K G V EA+ + E + + P
Sbjct: 298 CKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE-LERFEVSPD 356
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y+IL++GLC + A +KM+K+ G +AN TY L+DG C++G+ +A +
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKE-GILANSVTYNSLIDGCCKEGKMDKALEIC 415
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+M P V T++ LI G C I A+ EM+ ++ PD+ +++++ C
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHC 473
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 210/474 (44%), Gaps = 42/474 (8%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T L +Q L A ++F E + K VY +I L N+I E +
Sbjct: 180 PSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK--GIVPTVIVYTILIRGLCSDNKIEEAE 237
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ M+ + T + Y + +A+ L++++ V +F L+ +
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K +++AA LF+ + + V I N L+D C+ A+ +F E++ PD
Sbjct: 298 CKFGEMKAARNLFV-NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y IL++GLC+ R EA ++ F +++++G + V Y +L+ C +GK+ A+
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNI----FEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGGIPSLASYSA 301
+I ++ G++ + I DG +++ A + +E +I+ P + +Y+A
Sbjct: 413 EICSQMTENGVEP-----NVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTA 467
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M G + E K+ +M G P+ L L KDG + +ALE+ E++
Sbjct: 468 MIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ 527
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
T P V DAG S + + N Y L+ GLC+DG+F +
Sbjct: 528 T--PRCNV---------DAGGSKPS-------------LTNHVAYTALIHGLCQDGQFSK 563
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
A ++ +M P Y V++RGL + +Y +M +M+ +P+ +V
Sbjct: 564 AVKLFSDMRRYGLQPDEVIYVVMLRGLFQV--KYILMMLHADMLKFGVIPNSAV 615
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 187/454 (41%), Gaps = 82/454 (18%)
Query: 58 SNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQS 117
+NRI E +++ +K + ++ T + R G++ A SL + N V +
Sbjct: 190 TNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVDPNEV----T 245
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGW--------------------------EVKSRI 151
FN L+ KE L A +L L C+ EV R+
Sbjct: 246 FNILISSYYKEENLVQALVL-LEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERV 304
Query: 152 QSL---------NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+SL N L+ C + + LH ++M+ +G P+ ++Y+IL+ G C R L
Sbjct: 305 ESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRML 364
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A L M G + V + T++ LC +G+I+D ILE +
Sbjct: 365 DLALDLFNDM----KTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELM----------- 409
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
E EG+K I + Y+++ L+ + R E + L +M
Sbjct: 410 -----------EETKEGSKGHI------------SPYNSIIYGLFKQNRFDEASEFLAKM 446
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+P V + K+G +++A + I ++M+ +P++ VYN L+ G G+
Sbjct: 447 GK--LFPRAVDRSMTIIQKCKEGAIEDA-KNIYDKMIDEGGIPSILVYNSLVHGFSQHGS 503
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
AV + +M C T+ ++ C G+ A + +E++ R P ETY+
Sbjct: 504 IREAVELINEMISN-NCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYS 562
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
LI LC G +A+ EM+ + LPD +W
Sbjct: 563 PLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIW 596
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 214/517 (41%), Gaps = 57/517 (11%)
Query: 9 LTPT--YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKE 66
L PT +L Q+I QK+ AL+ F+ A + + H+ Y ++I L R +K+
Sbjct: 34 LPPTQDHLCQLILDQKTSSEALQTFRWAS-TFSKFTHSQSTYRTLIHKLCIFRRFDTVKQ 92
Query: 67 VIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++D+M + +F T +R +RAG +++ +F+ + FN++L +
Sbjct: 93 LLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVL 152
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE ++ A + +S V+ + +LM LC R + Q + G P+
Sbjct: 153 VKED-IDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPN 211
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+ L+ LC + ++ A L+ M + V + L+ + + + A+
Sbjct: 212 TVIYNTLLHALCRNGKVGRARSLMNEMV--------DPNEVTFNILISSYYKEENLVQAL 263
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+LEK L ++ CN G E A+ L + G + ++A Y+ +
Sbjct: 264 VLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVA-YNTLIKG 322
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG---T 362
G++ G L +M KG+ P++ Y + + M+D AL++ + G
Sbjct: 323 FCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRN 382
Query: 363 FVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
FV ++ +++GLC G +++ L + +K+ G + Y ++ GL + RF
Sbjct: 383 FV----TFDTMIRGLCSEGRIEDGFSILELMEETKE-GSKGHISPYNSIIYGLFKQNRFD 437
Query: 421 EASRVL---------------------------------EEMLIRSYWPCVETYNVLIRG 447
EAS L ++M+ P + YN L+ G
Sbjct: 438 EASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHG 497
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G EAV + EMIS P S +++++ C
Sbjct: 498 FSQHGSIREAVELINEMISNNCFPIASTFNAIITEFC 534
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY S++ S+ I E E+I++M ++C S F I + G++ A+ +++
Sbjct: 490 VYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDI 549
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
+ CV T++++ L+ + ++ ++ A +FL
Sbjct: 550 TARGCVPNTETYSPLIDVLCRKGDIQKALQVFL 582
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 210/435 (48%), Gaps = 10/435 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y +I L E ++ KE+I M+ C+ + I + ++ EAV + K+L
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++ TL+ + K + E + + +++ L++ L + +
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIG-LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL++ + + G P+ Y+ L+ LC R+ +EA L F R+ + G + V
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL----FDRMGKIGLRPNDV 403
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C +GK+ A+ L +++ GLK + + C G DI A+ + E
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG-DISAAEGFMAE 462
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ + P++ +Y+++ ++G+I + ++ EM KG PS+ + L+ LF+ G+
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ +A+++ EM + P YN++++G C+ G+ + A +LK+M+++ G V + +Y
Sbjct: 523 IRDAVKLF-NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSY 580
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET-YNVLIRGLCSIGKQYEAVMWLEEMI 465
L+ GLC G+ EA +V + L + E Y L+ G C GK EA+ +EM+
Sbjct: 581 RPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 466 SQAKLPDISVWSSLV 480
+ D+ + L+
Sbjct: 640 QRGVDLDLVCYGVLI 654
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 193/451 (42%), Gaps = 36/451 (7%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y S+I + I+ + + +M E + + + Y G++N+A+ L+ ++
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+F TLL + + + A LF W VK + N++++ C+
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF-NEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV 226
A +EM +G PD SY L+ GLC + +EA +F KG+ E + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-----KVFVDGLHKGNCELNEI 613
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK----- 281
Y LL C +GK+++A+ + ++++++G +DL G I+G+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRG----------VDLDLVCYGVLIDGSLKHKDR 663
Query: 282 ----SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
L+ E RG P Y++M G E + D M +G P+ V Y A
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY----NILLKGLCDAGNSAVAVMYLKKM 393
+ L K G V+EA EV+ +M + VP Y +IL KG D + + K
Sbjct: 724 INGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK- 781
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
G +AN TY +L+ G CR GR EAS ++ M+ P TY +I LC
Sbjct: 782 ----GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ M + PD +++L+ C
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 199/483 (41%), Gaps = 63/483 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
VY ++I L + + E + + D+M D ++ I + R G+L+ A+S +
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 107 SQFNCVNWTQSFNTLLK----------------EMVKESKLEAAHILFLRSCYGWEVKSR 150
+N+L+ EM+ + KLE + + G+ K +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK-KLEPTVVTYTSLMGGYCSKGK 487
Query: 151 IQ----------------SLNLLMDVLCQCRRSDL---ALHVFQEMDFQGCYPDRESYHI 191
I S+ +L R+ L A+ +F EM P+R +Y++
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+++G C + +++A L M ++KG D YR L+ LC G+ +A K+
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEM----TEKGIVPDTYSYRPLIHGLCLTGQASEA-----KV 598
Query: 252 LRKGLKAPKSRRHRIDLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
GL + I C +G+ +E A S+ E + RG L Y +
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGK-LEEALSVCQEMVQRGVDLDLVCYGVLI--- 654
Query: 307 YNEGRIVEGDK-----VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+G + D+ +L EM +G P V+Y + + A K G EA I + M+
Sbjct: 655 --DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG-IWDLMINE 711
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
VP Y ++ GLC AG A + KM + V V N TYG +D L + ++
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM-QPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+ L +++ TYN+LIRG C G+ EA + MI PD +++++
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 482 SVC 484
+C
Sbjct: 831 ELC 833
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 154/367 (41%), Gaps = 42/367 (11%)
Query: 118 FNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
F+ L++ V+ ++ ++F + +++L+ L+ L + R LA+ +F +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
G PD Y +++ LC + L+ A ++ M G +IV Y L+ LC
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM----EATGCDVNIVPYNVLIDGLCK 274
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
+ K+ +A+ I + + K LK P +
Sbjct: 275 KQKVWEAVGIKKDLAGKDLK------------------------------------PDVV 298
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + L G +++DEM F PS + + L K G ++EAL ++ +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV-KR 357
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+V P + VYN L+ LC A + +M K +G N TY IL+D CR G
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYSILIDMFCRRG 416
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ A L EM+ V YN LI G C G A ++ EMI++ P + ++
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 478 SLVASVC 484
SL+ C
Sbjct: 477 SLMGGYC 483
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 6/219 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y SMI S++ E + D M + C + + I +AG +NEA L +
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V ++ L +++ + +++ + L + + + + N+L+ C+ R
Sbjct: 744 QPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A + M G PD +Y ++ LC + +A L SM ++KG D V
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM----TEKGIRPDRV 858
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
Y TL+ C G++ A ++ ++LR+GL P ++ R
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGL-IPNNKTSR 896
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 183/444 (41%), Gaps = 57/444 (12%)
Query: 92 RAGQL--NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA--------AHILFLRS 141
RAG L ++A +F L + +S N L + + + A A LF R
Sbjct: 84 RAGTLSRDDAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRV 143
Query: 142 C---YGWEVK-SRIQSLNLLMDVLCQCRRSDLALHVF----------------------- 174
C G +V + N+LMD C+ RR DL L +F
Sbjct: 144 CREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLC 203
Query: 175 -------------QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
M GC P+ SY I++K LC++ A LL M Q G+
Sbjct: 204 YANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMM---AKQGGA 260
Query: 222 -GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y T++ ++G+ A + ++ R+G+K P + + + ++ A
Sbjct: 261 CSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVK-PDVVTYNLIIDALCKARAMDKA 319
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+ ++ + G P +YS M GR+ E K+ EM+ +G P++V + LA+
Sbjct: 320 ELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLAS 379
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K G EA E + KG P + Y LL G G A + M K G
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKG-HKPDIFSYCTLLHGYASEGCFADMIGLFNSM-KSNGIA 437
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
AN + IL+ + G +A + EM + P V TY+ +I +G+ +A+
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
+M+++ P+ +V+SS++ C
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFC 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 199/466 (42%), Gaps = 43/466 (9%)
Query: 56 SESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT 115
S S R ++ +++ + +G +C ++T I + G+ +A SLF +++
Sbjct: 242 SMSQRALDLLQMMAK-QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDV 300
Query: 116 QSFNTLLKEMVKESKLEAAHILFLR-------------SC--YGW--------------E 146
++N ++ + K ++ A ++ + SC +G+ E
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFRE 360
Query: 147 VKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K R I + N + LC+ RS A F M +G PD SY L+ G ++
Sbjct: 361 MKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGC 420
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ L SM G + ++ L+ A +G + DAM I ++ ++G+ +P
Sbjct: 421 FADMIGLFNSM----KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGV-SPDV 475
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + + + A N+ + RG P+ A YS++ G +V+ +++ E
Sbjct: 476 VTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSE 535
Query: 322 MRTKGF-WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M KG P +V + + + +L KDG V +A ++ + G P V +N L+ G C
Sbjct: 536 MINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE-RPGVITFNSLIDGYCLV 594
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A L M + VG + TY L+DG ++GR + + EM + P T
Sbjct: 595 GKMDKAFKILDAM-EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
Y +++ GL G+ A EMI +S++ ++ +C N
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 191/470 (40%), Gaps = 44/470 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L ++ + + + V+ QM D + ++ I YA G+L EA +F+ +
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSCYGWE--- 146
+ + + N+ L + K + + A F L Y E
Sbjct: 362 KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCF 421
Query: 147 --------------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ + +L+ + D A+ +F EM QG PD +Y +
Sbjct: 422 ADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ RL +A M R G + +Y +++ C G + A +++ +++
Sbjct: 482 ISTFSRMGRLTDAMEKFNQMVAR----GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537
Query: 253 RKGLKAPK-SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN-EG 310
KG+ P + C DG ++ A + + A G P + +++++ ID Y G
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMD-AHDIFDLATDIGERPGVITFNSL-IDGYCLVG 595
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
++ + K+LD M G P +V Y L FK+G +++ L + E KG P Y
Sbjct: 596 KMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGV-KPNTVTY 654
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
I+L GL AG + A +M + G YGI++ GLCR+ EA + +++
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIES-GTTVTVSIYGIILGGLCRNNCADEAIILFQKLG 713
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + N +I + + ++ EA + + LP+ S + ++
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 201/495 (40%), Gaps = 54/495 (10%)
Query: 27 ALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
A K+F+E K++ PN AS L + R E E D M + +
Sbjct: 354 AAKMFREMKKRGLIPNIVTCNSFLAS----LCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T + YA G + + LF ++ F L+ K ++ A ++F
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM-QQ 468
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
V + + + ++ + R A+ F +M +G P+ Y +++G C L +
Sbjct: 469 QGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVK 528
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L+ M I++ DIV + +++ +LC G++ DA I + G R
Sbjct: 529 AKELVSEM---INKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG-----ERPG 580
Query: 265 RIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
I DG + G A +++ + G P + +Y+ + + GRI +G +
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM+ KG P+ V Y LA LF+ G A + E + GT V TV +Y I+L GLC
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV-TVSIYGIILGGLCRN 699
Query: 381 G------------------------NSAVAVMY---LKKMSKQV-------GCVANGETY 406
N+ + MY K+ +K++ G + N TY
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
G+++ L +DG +A+ + M P N +IR L G+ +A +L ++
Sbjct: 760 GVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDG 819
Query: 467 QAKLPDISVWSSLVA 481
+ L + S S +++
Sbjct: 820 KRILLEASTTSLMLS 834
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 200/471 (42%), Gaps = 36/471 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + + I E KE++ +M+ + ++ T + + +AG EA+ F ++
Sbjct: 426 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 485
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ V + N LL +E + A F + ++ + S N ++D CQ
Sbjct: 486 YRSGLVANSVIHNALLCSFYREGMIAEAE-QFKQYMSRMKISFDVASFNCIIDSYCQRGN 544
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL---------------LYS 211
A V+ M G PD +Y L++GLC L +A L +
Sbjct: 545 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 604
Query: 212 MFWRISQKGSGE----------------DIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ I + G+ + D Y LL C +GKI A+ +L+ +L KG
Sbjct: 605 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKG 664
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVE 314
L P + + L + ++ A + E + + G+ +Y++M G+I E
Sbjct: 665 L-VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 723
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++++ M +PS Y + K G + L + +MVK P Y +L+
Sbjct: 724 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL-YLYRDMVKEGIKPDNVTYRLLI 782
Query: 375 KGLCDAGNSAVAVMYLKKMS-KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
GLC+ G +AV +L+KM ++ G Y L++ CR G A + E+M
Sbjct: 783 FGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 842
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + ++RGLC GK EA++ ++ +P I+ +++L+ +C
Sbjct: 843 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC 893
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 183/438 (41%), Gaps = 25/438 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ + R ++D M+ + E + I + + A L
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + + N S+NTL+ E K+ A +F +K + + L+D C+
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIF-NQMLRQSLKPSVATYTALIDGYCR 381
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R+D A V EM G P R +++A +L M G
Sbjct: 382 NGRTDEARRVLYEMQITGVRP---------------REVSKAKQILKCML----ADGIDP 422
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D++ Y L+ +C G I + +IL ++ + G+ + C G E K
Sbjct: 423 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 482
Query: 284 INEALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++ + R G + + ++A+ Y EG I E ++ M + + + +
Sbjct: 483 VD--IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 540
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G V EA V + MV+ + P + Y LL+GLC G+ A ++ + ++ C +
Sbjct: 541 QRGNVLEAFSVY-DNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK-ACAID 598
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+T L+ G+C+ G EA + E+M+ R+ P TY +L+ G C GK A++ L+
Sbjct: 599 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQ 658
Query: 463 EMISQAKLPDISVWSSLV 480
M+ + +PD ++ L+
Sbjct: 659 MMLEKGLVPDTIAYTCLL 676
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 193/409 (47%), Gaps = 27/409 (6%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G+L++A S+ + + N ++NT+L VK+ + ++A + L +++ + +
Sbjct: 244 GKLSKAESMLQKMKNCRLPNAV-TYNTILNWYVKKGRCKSA-LRILDDMEKNGIEADLYT 301
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N+++D LC+ +RS A + + M PD SY+ L+ G + ++N A ++ M
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R S K S + Y L+ C G+ +A ++L ++ G++ P+
Sbjct: 362 -RQSLKPS---VATYTALIDGYCRNGRTDEARRVLYEMQITGVR-PR------------- 403
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
++ AK ++ L G P + +YSA+ + G I E ++L M+ G P+ V+
Sbjct: 404 --EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 461
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + K G EAL+ + G +V ++N LL G A A + + M
Sbjct: 462 YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV-IHNALLCSFYREGMIAEAEQFKQYM 520
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
S+ + + ++ ++D C+ G LEA V + M+ + P + TY L+RGLC G
Sbjct: 521 SR-MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 579
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN-TAD--LNVCRKTLEQ 499
+A ++ ++ +A D ++L+ +C + T D L++C K + +
Sbjct: 580 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 628
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 193/455 (42%), Gaps = 16/455 (3%)
Query: 33 EAKEKYPN-YRHNGP----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA Y N RH P Y S++ L + + + KE + + +C + T +
Sbjct: 547 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 606
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G L+EA+ L + + N + T ++ LL K K+ A IL V
Sbjct: 607 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLV 666
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF-QGCYPDRESYHILMKGLCNDRRLNEAT 206
I + L++ L + A ++FQE+ +G Y D +Y+ +M G ++NE
Sbjct: 667 PDTI-AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 725
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ +M S Y L+ +G++ + + ++++G+K P + +R+
Sbjct: 726 RLMRNMHENEVYPSSAS----YNILMHGYIKKGQLSRTLYLYRDMVKEGIK-PDNVTYRL 780
Query: 267 DLCPCNDGEDIEGAKSLINEALIR--GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ + IE A + + ++ G P Y A+ G I ++ ++M+
Sbjct: 781 LIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKA 840
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G PS V + + L K G V+EA+ V M G VPT+ + L+ GLC
Sbjct: 841 LGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG-MVPTIATFTTLMHGLCKEFKID 899
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A +LK++ + G + TY +L+ GLC +A + EEM + P + TY L
Sbjct: 900 DA-FHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
+ + G + L+++ + +P SL
Sbjct: 959 TGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL 993
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 171/424 (40%), Gaps = 65/424 (15%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRI 151
AG L A S+ S V Q + TL + K KL+ AH L LR
Sbjct: 45 AGVLPAATSVHGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALR----------- 93
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL--- 208
++D + Q D H++ C + HIL++ + ++ HL
Sbjct: 94 -----MLDSIVQQSGLDRITHIY-------CM----AVHILVQAQMPSQAMSVLRHLALT 137
Query: 209 ------LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
++S R + ++ L+ A +GK+ DA + + G KA
Sbjct: 138 GFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFS 197
Query: 263 RHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ I L N E + + E+L R + + + + L +G++ + + +L
Sbjct: 198 CNNILNALVGINKSEYVW---LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ 254
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M+ P+ V Y L K G AL ++++ M K + YNI++ LC
Sbjct: 255 KMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDD-MEKNGIEADLYTYNIMIDKLCKL 312
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
SA A + LK+M ++V + +Y L+ G +G+ A + +ML +S P V T
Sbjct: 313 KRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVAT 371
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEM---------ISQAKL-----------PDISVWSSLV 480
Y LI G C G+ EA L EM +S+AK PD+ +S+L+
Sbjct: 372 YTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI 431
Query: 481 ASVC 484
+C
Sbjct: 432 NGMC 435
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 30/256 (11%)
Query: 256 LKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
LK R+ +D+ CN + A+S++ + + +P+ +Y+ +
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML-QKMKNCRLPNAVTYNTILNWYVK 276
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+GR ++LD+M G L Y + L K A +++ M + P
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKR-MREVNLTPDEC 335
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+ G G +A+ +M +Q + TY L+DG CR+GR EA RVL E
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQ-SLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
Query: 429 MLIRSYWP-----------C---------VETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
M I P C V TY+ LI G+C +G +E L M
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 454
Query: 469 KLPDISVWSSLVASVC 484
LP+ ++++LV C
Sbjct: 455 VLPNNVLYTTLVFYFC 470
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
L +L G + +A ++++ +K +P YN +L G A+ L M K
Sbjct: 237 LNSLCTQGKLSKAESMLQK--MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKN- 293
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
G A+ TY I++D LC+ R A +L+ M + P +YN LI G GK A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ +M+ Q+ P ++ +++L+ C N
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRN 382
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 48/341 (14%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + NLL+ LC+ D A +F +M +GC P++ + IL++G C R +A
Sbjct: 147 VNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQAL 206
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ + G + V+Y TL+ + C Q +A +++E++ KGL
Sbjct: 207 EFVDG------KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGL---------- 250
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+P + ++++ L G++ E ++ +M+ G
Sbjct: 251 --------------------------LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 327 FW----PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
P++V + L ++GM++EA ++E G FV ++ YN L GL G
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFV-SLESYNTWLLGLLRNGK 343
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
L +M + G N +Y I++DGLCR+ L+A R+++ M+ +P TY
Sbjct: 344 LLEGRSVLDEMVEN-GIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYT 402
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L+ G CS GK +EA L EMI + P+ ++L+ S+
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 194/423 (45%), Gaps = 36/423 (8%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
R+ + + + SL+ ++ Q T +FN L++ + + + L+ A LF +
Sbjct: 124 RSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ ++ +L+ C+ R+ AL G +R Y+ L+ C +EA
Sbjct: 184 PNKF-TVGILVRGFCRAGRTKQALEFVDGK--MGGNVNRVVYNTLVSSFCKQDMNDEAEK 240
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG-LKAPKSRRHRI 266
L+ R+++KG D+V + + + ALC GK+ +A +I + G L PK
Sbjct: 241 LV----ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTF 296
Query: 267 DLCP---CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+L C +G +E A+SL+ G SL SY+ + L G+++EG VLDEM
Sbjct: 297 NLMLKGFCQEGM-MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMV 355
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P++ Y + L ++ M+ +A +++ + G + TV Y LL G C G
Sbjct: 356 ENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTV-TYTTLLHGYCSKGKV 414
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L +M ++ GC N T L++ L ++GR EA +L++M +SY T N+
Sbjct: 415 FEAKAILNEMIRK-GCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNI 473
Query: 444 LIRGLCSIG---KQYEAV--MWLEEMISQAK-----------------LPDISVWSSLVA 481
++ GLC G K E V MW + S K +PD+ +++L+
Sbjct: 474 VVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLIN 533
Query: 482 SVC 484
+C
Sbjct: 534 GLC 536
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 212/500 (42%), Gaps = 73/500 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +I L ESN + +E+ D+M C+ +R + RAG+ +A+
Sbjct: 153 TFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGK 212
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
N VN +NTL+ K+ + A L R + + + N + LC+ +
Sbjct: 213 MGGN-VNRV-VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD-VVTFNSRISALCRAGK 269
Query: 167 SDLALHVFQEMDFQG----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
A +F++M G P+ ++++++KG C + + EA L+ +M + G+
Sbjct: 270 VFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETM----KKGGNF 325
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCP--------- 270
+ Y T L L GK+ + +L++++ G++ P + I LC
Sbjct: 326 VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIE-PNIYSYNIVMDGLCRNHMMLDARR 384
Query: 271 ------------------------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
C+ G+ E AK+++NE + +G P+ + + + L
Sbjct: 385 LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFE-AKAILNEMIRKGCHPNTYTCNTLLNSL 443
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG----- 361
+ EGR E +++L +M K + V + L ++G +++A EV+ E G
Sbjct: 444 WKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLG 503
Query: 362 ----------------TFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGE 404
T VP V Y L+ GLC G +++ M+K + +
Sbjct: 504 KENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH--PDSV 561
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY V C+ G+ A RVL++M ++TYN LI GL S G+ +E ++EM
Sbjct: 562 TYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ PDI +++++ +C
Sbjct: 622 RERGIHPDICTYNNMINCLC 641
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 204/481 (42%), Gaps = 61/481 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY +++ + + E ++++++M F + I RAG++ EA +F
Sbjct: 218 NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIF 277
Query: 104 KNLSQFNCVNWTQ----SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+++ + + +FN +LK +E +E A L G S ++S N +
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVS-LESYNTWLL 336
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
L + + V EM G P+ SY+I+M GLC + + +A L+ M
Sbjct: 337 GLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMV----SN 392
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------------ 255
G D V Y TLL C +GK+ +A IL +++RKG
Sbjct: 393 GVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEA 452
Query: 256 ---LKAPKSRRHRIDLCPCN--------DGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
L+ + +++D CN +GE +E A +++E + G SL + +A
Sbjct: 453 EEMLQKMNEKSYQLDTVTCNIVVNGLCRNGE-LEKASEVVSE-MWTDGTNSLGKENPVA- 509
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L N V + P ++ Y + L K G ++EA + E M K
Sbjct: 510 GLVNSIHNVSTN-----------VPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK-NLH 557
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P Y+ + C G + A+ LK M + GC +TY L+ GL G+ E
Sbjct: 558 PDSVTYDTFVLNFCKQGKISSALRVLKDMERN-GCSKTLQTYNSLILGLGSKGQIFEMYG 616
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASV 483
+++EM R P + TYN +I LC GK +A L EM+ + + P++S + L+ +
Sbjct: 617 LMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAF 676
Query: 484 C 484
C
Sbjct: 677 C 677
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 189/456 (41%), Gaps = 67/456 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++ L ++ + + + ++D M + + T + Y G++ EA ++ +
Sbjct: 366 YNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMI 425
Query: 108 QFNCVNWTQSFNTLLKEMVKES-KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ C T + NTLL + KE K EA +L + +++ + + N++++ LC+
Sbjct: 426 RKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDT--VTCNIVVNGLCRNGE 483
Query: 167 SDLALHVFQEMDFQGC----------------------YPDRESYHILMKGLCNDRRLNE 204
+ A V EM G PD +Y L+ GLC +L E
Sbjct: 484 LEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEE 543
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A F + K D V Y T + C QGKI A+++L+ + R G
Sbjct: 544 AK----KKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG--------- 590
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
C+ +L +Y+++ + L ++G+I E ++DEMR
Sbjct: 591 ------CS---------------------KTLQTYNSLILGLGSKGQIFEMYGLMDEMRE 623
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P + Y + L + G +A ++ E + KG P V + IL+K C +G+
Sbjct: 624 RGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFK 683
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
VA L ++ V C Y ++ + L G+ +A + E L RS Y L
Sbjct: 684 VAC-ELFDVALSV-CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDL 741
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I LC G+ +A L+++I + D S + ++
Sbjct: 742 IDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVI 777
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 219/493 (44%), Gaps = 46/493 (9%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
LK F A + + NG Y+S++ +LS E++ +++MK +
Sbjct: 80 GLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPTREALSDV 139
Query: 87 IRTYARAGQLNEAVSLFKNLSQF-NCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSC 142
+ YA G +++A+ ++ + + N + T + N+LL +VK ++E AH L+ +
Sbjct: 140 LCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRD 199
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G ++ + ++++ LC R + + + + +GC P+ Y+ L+ G C +
Sbjct: 200 NGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEV 259
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL------ 256
A Y +F ++ KG + + +L+ C G + +L ++ +GL
Sbjct: 260 ESA----YKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQM 315
Query: 257 ---------------KAPKSRRHRIDLC--P------------CNDGEDIEGAKSLINEA 287
KA + + + C P C+ GE +E A+ L+ +
Sbjct: 316 YNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGE-VEEAEKLLEQT 374
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ RG P+ +Y+ + +G + L EM T G ++ Y A + L G V
Sbjct: 375 IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEV 434
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D AL + + M +G +P +YN+L+ GL G ++A + L +M Q + Y
Sbjct: 435 DTALTIRDRMMNRG-ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ-NIAPDAFVYA 492
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LVDG R G EA ++ + ++ + P V YNV+I+G G A++ +++M
Sbjct: 493 TLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRA 552
Query: 468 AKLPDISVWSSLV 480
+PDI +S+++
Sbjct: 553 HHVPDIFTFSTII 565
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 194/479 (40%), Gaps = 42/479 (8%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
M+ L RI + ++I+ G C + T I Y + G++ A LFK L
Sbjct: 214 MVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKG 273
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFL--------------------RSCYGWEVKSR 150
+ Q+F +L+ K EA +L L R G+++K++
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAK 333
Query: 151 --------------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ + N L++ C + A + ++ +G P++ +Y L+ G
Sbjct: 334 DTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGY 393
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C +AT L M S G D++ Y L+ L G++ A+ I ++++ +G+
Sbjct: 394 CKQGEYTKATDYLIEM----STSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGI 449
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P + + + + + AK ++ E L + P Y+ + G + E
Sbjct: 450 -LPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K+ + KG P +V Y + K GM+D A+ I++ M + VP + ++ ++ G
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDK-MRRAHHVPDIFTFSTIIDG 567
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
N + M KQ C N TY L++G CR G A ++ M P
Sbjct: 568 YVKQHNMNAVLKIFGLMVKQ-NCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKP 626
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRK 495
V TY++LI C K +AV + E M+ P+ + + LV NT V R+
Sbjct: 627 SVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF-TNTKATAVSRE 684
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 6/258 (2%)
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
+L A D G + A+++ +++ P + L IE A L +E + R
Sbjct: 139 VLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDR 198
Query: 291 GGIPSLA----SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ + S M L +GRI +G K+++ KG P++V Y + K G
Sbjct: 199 DNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGE 258
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V+ A ++ ++ +KG F+PT++ + L+ G C G + L +M K G N + Y
Sbjct: 259 VESAYKLFKKLKMKG-FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEM-KDRGLSVNVQMY 316
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++D + G ++A L+EM P + TYN LI CS G+ EA LE+ I
Sbjct: 317 NNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIR 376
Query: 467 QAKLPDISVWSSLVASVC 484
+ P+ ++ LV C
Sbjct: 377 RGLAPNKLTYTPLVHGYC 394
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK----D 344
+ +PS + +++ L RI ++ DEM + + + + + K
Sbjct: 162 LHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLK 221
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +++ +++IE KG VP + YN L+ G C G A KK+ K G + +
Sbjct: 222 GRIEDGIKLIESRWGKGC-VPNIVFYNTLIDGYCKKGEVESAYKLFKKL-KMKGFIPTLQ 279
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
T+G LV+G C+ G F +L EM R V+ YN +I +G +A L+EM
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEM 339
Query: 465 ISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQ 499
PD+ +++L+ C+ ++ K LEQ
Sbjct: 340 SENCCEPDLVTYNTLINHF-CSRGEVEEAEKLLEQ 373
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 166/440 (37%), Gaps = 55/440 (12%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
K+ + +M + CE + T I + G++ EA L + + ++ L+
Sbjct: 333 KDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHG 392
Query: 125 MVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
K+ + +A L S G EV + S L+ L D AL + M +G
Sbjct: 393 YCKQGEYTKATDYLIEMSTSGLEVD--MISYGALIHGLVVAGEVDTALTIRDRMMNRGIL 450
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD Y++LM GL +L+ A +L M + D +Y TL+ G + +
Sbjct: 451 PDANIYNVLMNGLFKKGKLSMAKVMLTEML----DQNIAPDAFVYATLVDGFIRHGNLDE 506
Query: 244 AMQILEKILRKGLKA-------------------------PKSRR--HRIDLCPCNDGED 276
A ++ + I+ KGL K RR H D+ + D
Sbjct: 507 AKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIID 566
Query: 277 IEGAKSLINEALIRGGI-------PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
+ +N L G+ P++ +Y+++ +G +K+ MR+ G P
Sbjct: 567 GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKP 626
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA--- 386
S+V Y + + K+ + +A+ E M+ P ++ L+ G + +AV+
Sbjct: 627 SVVTYSILIGSFCKEAKLGKAVSYFEL-MLINKCTPNDAAFHYLVNGFTNTKATAVSREP 685
Query: 387 --------VMYLKKMSKQVG--CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
M+ S+ +G Y ++ LC+ A ++ +ML
Sbjct: 686 NNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCS 745
Query: 437 CVETYNVLIRGLCSIGKQYE 456
++ LI G+C G E
Sbjct: 746 DAVSFVALIHGICLEGNSKE 765
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 154/394 (39%), Gaps = 42/394 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ L + +++ K ++ +M + V+AT + + R G L+EA LF+ +
Sbjct: 455 IYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLI 514
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ +N ++K K ++ A IL + I + + ++D +
Sbjct: 515 IEKGLDPGVVGYNVMIKGFSKSGMMDNA-ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ L +F M Q C P+ +Y L+ G C R E T + +F + G +V
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYC---RKGE-TKMAEKLFSMMRSHGLKPSVV 629
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ + C + K+ A+ E +L I+ C ND
Sbjct: 630 TYSILIGSFCKEAKLGKAVSYFELML-------------INKCTPNDAA---------FH 667
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L+ G + A+ + + +E + M G+ Y L L + M
Sbjct: 668 YLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRM 727
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-GE- 404
V AL++ + + G V + L+ G+C GNS K+ + C N GE
Sbjct: 728 VKTALQLRNKMLAFGLCSDAVS-FVALIHGICLEGNS-------KEWRNMISCDLNEGEL 779
Query: 405 ----TYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
Y + +D +G EAS +L+ M I+ Y
Sbjct: 780 QIALKYSLELDKFIPEGGISEASGILQAM-IKGY 812
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 40/357 (11%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D A + M+ +G Y++LM GLC + R+ EA + SM ++G
Sbjct: 206 CEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV----ERGI 261
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D V YRTL++ C +++ A+++ + +L P + I+ A
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHF-VPSVASCSFMVDGLRKRGHIDKAF 320
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L G +P+L + +A+ L + R E +++ M +G P+ V Y + +L
Sbjct: 321 RLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSL 380
Query: 342 FKDGMVDEALEVIE----------------------------------EEMVKGTFVPTV 367
K GM+D+AL + + EMV+ P+
Sbjct: 381 CKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
Y+ L+ GLC G+ A A+ ++M++ G N T+ L+ G C+DG EA+R+ +
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARN-GVSGNVYTFTTLISGFCKDGNMDEAARLFD 499
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+M+ S P T+NV+I G C +G +A ++M+ + PD + SL++ +C
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 207/484 (42%), Gaps = 29/484 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK------YPNYRHNGPVYASMIGILSESN 59
P +T L + K+ AL +F +EK YP Y S+I + +
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYP--------YNSLINGYCQHD 419
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ + ++++M + ++ I R G L A+ L + +++ +F
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFT 479
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
TL+ K+ ++ A LF + V + + + N++++ C+ A ++ +M
Sbjct: 480 TLISGFCKDGNMDEAARLFDKMIDSSVVPNEV-TFNVMIEGYCRVGNVRKAFQLYDQMVD 538
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD +Y L+ LC +A + + S TL++ C +G
Sbjct: 539 RGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS----FSLTTLMYGFCKEG 594
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPC--NDGEDIEGAKSLINEALIRGGIPSLA 297
++ + I +++ +G+K I +DGE I L E +G P
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKIS---VLFREMKEKGVKPDNV 651
Query: 298 SYSAMAIDLYN-EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
++ M ID+++ E IV+ D+M G P++V Y + L K G + A +++ E
Sbjct: 652 FHTCM-IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA-QILCE 709
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
EM+ G F+P YN L L + G A + + + GC+AN T+ L+ G C+
Sbjct: 710 EMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE--GCLANTVTFNTLIKGFCKA 767
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G+ A +++ ++P +Y+ +I LC +G +A EM+ + PDI +
Sbjct: 768 GQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAY 827
Query: 477 SSLV 480
+ L+
Sbjct: 828 NILI 831
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 186/457 (40%), Gaps = 55/457 (12%)
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+++ D+M + V+ IR Y L+ A L + +N L+
Sbjct: 180 RDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYG 239
Query: 125 MVKESK-LEAAHI---LFLRSCYGWEVKSR------------------------------ 150
+ + ++ LEA + + R EV R
Sbjct: 240 LCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPS 299
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S + ++D L + D A + + G P+ + + L+ LC DRR EA L
Sbjct: 300 VASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFR 359
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + +G + V Y L+ +LC +G + DA+ + +++ KG+ R+ + P
Sbjct: 360 GM----ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI--------RVTVYP 407
Query: 271 CND-------GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
N ++ A+ L+NE + +G PS ASYS + L +G + ++ EM
Sbjct: 408 YNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMA 467
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G ++ + ++ KDG +DEA + ++M+ + VP +N++++G C GN
Sbjct: 468 RNGVSGNVYTFTTLISGFCKDGNMDEAARLF-DKMIDSSVVPNEVTFNVMIEGYCRVGNV 526
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A +M + G + TY L+ LC ++A ++++ +
Sbjct: 527 RKAFQLYDQMVDR-GLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
L+ G C G+ E +EM ++ D+ ++ +V
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 190/480 (39%), Gaps = 51/480 (10%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
++I L + R E + + M E + +A I + + G +++A+ +F + +
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+N+L+ + A L L + S + L+ LC R+ DL
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGL-LNEMVEKGLAPSAASYSPLIAGLC--RKGDL 456
Query: 170 A--LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + + +EM G + ++ L+ G C D ++EA L F ++ + V
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL----FDKMIDSSVVPNEVT 512
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ ++ C G ++ A Q+ ++++ +GL P + +R + AK +++
Sbjct: 513 FNVMIEGYCRVGNVRKAFQLYDQMVDRGL-TPDNYTYRSLISVLCLTLGAMKAKEFVDDL 571
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK--DG 345
+ + S + + EGR+ E + DEMR +G L+ + + A K DG
Sbjct: 572 ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDG 631
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
E + V+ EM + P + ++ N A+ KM GC N T
Sbjct: 632 ---EKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIAD-GCSPNVVT 687
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWP----------------------------- 436
Y +L++ LC+ G A + EEML+ + P
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL 747
Query: 437 --CVE---TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
C+ T+N LI+G C G+ A+ ++ PD +S+++ + C D+N
Sbjct: 748 EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINEL-CKVGDIN 806
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 220/511 (43%), Gaps = 43/511 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L ++ +++ Q++PL LK + P + + V + L + E++
Sbjct: 111 LNSHSVASVLQNQENPLYPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELL 170
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
+K + + I ++ R G +F +S T+ +N ++ +VK
Sbjct: 171 KDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKS 230
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+ L+ A++ F + K + N+L+ +C+ D AL + ++M+ G P+ +
Sbjct: 231 NSLDLAYLKF-QQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFT 289
Query: 189 YHILMKGLCNDRRLNEATHLLYSM-------------------FWRISQKGSGE------ 223
Y IL+ G N ++++EA +L +M F ++ + E
Sbjct: 290 YTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFI 349
Query: 224 --DIVIYR----TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ V+ R TLL L + ++A +L+K + G K P S I + G D+
Sbjct: 350 EREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHK-PDSATFNIAMNCLIKGFDL 408
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
++++ + +G ++Y A+ LY G++ EG+ ++M G ++ Y
Sbjct: 409 NEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMV 468
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG----NSAVAVMYLKKM 393
+ K M+D+A +E KG P + +N L+ G C G + + VM L+
Sbjct: 469 IDCFCKTSMMDKATNTFKEMQYKGI-PPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH- 526
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
G + T+ ++DGLCR + +A EM++ P TYN+LI LC IG
Sbjct: 527 ----GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGD 582
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ L +M + PD+ +++L+ S C
Sbjct: 583 VPRSMKLLRKMQTDGINPDVFSFNALIQSFC 613
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 183/495 (36%), Gaps = 87/495 (17%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L +SN + QM D+C+ + I R+G ++EA+ L K +
Sbjct: 219 LYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQM 278
Query: 107 SQ-----------------FNCVNWTQSFNTLLKEMVKESKL---EAAHILFLRSCYGWE 146
FN ++F L E +K K+ EA F+ +
Sbjct: 279 EGLGYSPNVFTYTILIDGFFNAKKVDEAFRVL--ETMKARKVSPSEATIRSFIHGVFRCV 336
Query: 147 VKSRIQSL------------NLLMDVLCQC-------RRSDLALHVFQEMDFQGCYPDRE 187
++ L L D L C R + L F ++ G PD
Sbjct: 337 APNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKI---GHKPDSA 393
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+++I M L LNE ++L R ++G Y L+ AL GK+ +
Sbjct: 394 TFNIAMNCLIKGFDLNEVCNILD----RFVEQGMKFGFSTYLALIKALYMAGKVTEGNHY 449
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++ GL + + C C ++ A + E +G P+L +++ + ID Y
Sbjct: 450 FNQMVKDGLLCNVCSYNMVIDCFCKTSM-MDKATNTFKEMQYKGIPPNLVTFNTL-IDGY 507
Query: 308 -NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G I + +L + GF P + + + + L + +++AL E MV P
Sbjct: 508 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSE-MVMWGLSPN 566
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSK------------------------------- 395
YNIL+ LC G+ ++ L+KM
Sbjct: 567 AVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFS 626
Query: 396 ---QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+G + + TY + C+ GRF EA + M P T N+++ L
Sbjct: 627 SMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVK-Q 685
Query: 453 KQYEAVMWLEEMISQ 467
Q+EA + + S+
Sbjct: 686 DQFEAAQKIAKTCSE 700
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 195/410 (47%), Gaps = 11/410 (2%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNW-TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
GQL+ A +F + N V ++ ++K + + +++AA ++ L ++ +
Sbjct: 193 GGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVM-LAELERSGIQPTV 251
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+LMD LC+ R + A + M P ++ IL+ GL +R E +L
Sbjct: 252 VTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQE 311
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M G + VIY L+ C +G +A+++ ++++ KG+K + I C
Sbjct: 312 M----EGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALC 367
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASY-SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
+GE +E A+ +++E L+ G + + S +A L GR+ +++ EM + P+
Sbjct: 368 KEGE-MEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPN 426
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ A + L K G +EA E+ + KG V + N L+ GLC N A L
Sbjct: 427 DAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV-NIATSNALIHGLCQGNNMKEATKVL 485
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K M G + TY I++ C+ + EA ++ ++M+ R + P + T+N +R C+
Sbjct: 486 KAMVDS-GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCN 544
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+GK + + L++M S+ PDI + +++ C D++ K L +L
Sbjct: 545 LGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY-CKAKDVHKANKYLIEL 593
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 209/486 (43%), Gaps = 65/486 (13%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM--KGDSCECKDSVFA 84
AL++F E K + Y + L + + ++++D+M G + C S+F
Sbjct: 340 ALRLFDEMVSK--GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC--SLFN 395
Query: 85 TAIRTYARA-GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSC 142
+ + + R G+L+ + L + + ++E+ K K E AA I FL
Sbjct: 396 SVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLG 455
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
G V I + N L+ LCQ A V + M G DR +Y+I+++ C ++
Sbjct: 456 KGLGVN--IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
EA L M R G D+ + T L A C+ GK++D + +L+++ +GLK
Sbjct: 514 EEAIQLRDDMIKR----GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLK----- 564
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV-EGDKVLDE 321
P + +Y + ID Y + + V + +K L E
Sbjct: 565 -------------------------------PDIVTYGTI-IDGYCKAKDVHKANKYLIE 592
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ G P+ V+Y A + ++G + +A+ V++ M PT YN L+ +C AG
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDT-MKHNGIQPTPITYNSLMYWMCHAG 651
Query: 382 -----NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
A LK + ++G + Y I++ G C+ G+ EA +EM R P
Sbjct: 652 LVEEAKEIFAQCILKNI--ELGVIG----YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRP 705
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKT 496
TY L+ C G + EA +EM+S +PD +++L+ S CC L+ ++
Sbjct: 706 NKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLI-SGCCEVDSLDKIVES 764
Query: 497 LEQLSS 502
++SS
Sbjct: 765 PAEMSS 770
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P+++ NIL++ L G +A +M + TY +++ LCR G A
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV 237
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L E+ P V TYNVL+ LC G+ EA M+ P I + L+
Sbjct: 238 MLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILI 293
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 217/514 (42%), Gaps = 43/514 (8%)
Query: 7 RLLTPTYLSQIIKKQKSPLTA--LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
R LTP+ + +++ Q + F+ A ++ YRH V+ M+ +LS +
Sbjct: 89 RALTPSQVRAVLRAQAQRDARAAFEFFRWADRQW-KYRHAPEVFDEMLALLSRTRLHDPA 147
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+ V+ M FA + +Y+RAG+L A+ + + + + C N +
Sbjct: 148 RRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNV 207
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V +++ A + F V + + N L+ LC RR AL + M GC P
Sbjct: 208 LVVAGRVDKA-LEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPP 266
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ SY +M LC ++R+ E +LL M + G D + Y L+ L G +A
Sbjct: 267 DKISYFTVMSFLCKEKRVAEVWNLLERMR---NDAGIFPDQITYNMLIHGLAKHGHADEA 323
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ L + K + + I C +G E AK +I E + +G P + +YSA+
Sbjct: 324 LTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSE-AKEIIGEMISKGCRPDVVTYSAVVD 382
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI---EEE---- 357
G + + K++ M G P+ V + A L L K G EA E++ EEE
Sbjct: 383 GFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTP 442
Query: 358 ---------------------------MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
M++ F PT N+L+ LC A A ++
Sbjct: 443 SGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFM 502
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
++ + GC N + ++ G R G A +L++M + + P V TY V++ L
Sbjct: 503 EQCQSK-GCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGR 561
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GK EA +E+M+++ LP + +++ C
Sbjct: 562 KGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYC 595
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 193/426 (45%), Gaps = 11/426 (2%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R+ + E ++M+ + + I+ A ++ EA+ + ++ Q C S+
Sbjct: 213 RVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYF 272
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
T++ + KE ++ L R + + N+L+ L + +D AL +E +
Sbjct: 273 TVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEG 332
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+ D+ Y ++ C + R++EA ++ M KG D+V Y ++ C G
Sbjct: 333 KRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMI----SKGCRPDVVTYSAVVDGFCRIG 388
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLAS 298
++ A ++++ + + G K P + H L C G+ E A L+N++ PS +
Sbjct: 389 ELDQARKMMKHMYKNGCK-PNTVTHTALLNGLCKVGKSSE-AWELLNKSEEEWWTPSGIT 446
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
YS + EG++VE V+ +M KGF+P+ V + AL K+ A + +E+
Sbjct: 447 YSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQ 506
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG F+ V + ++ G G+ A+ L M + TY ++VD L R G+
Sbjct: 507 SKGCFINVVN-FTTVIHGFSRQGDLESALSLLDDMY-LTNRHPDVVTYTVVVDALGRKGK 564
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA+ ++E+ML R P TY +I C G + + L++M+++ S ++
Sbjct: 565 MKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQGFS--SAYNQ 622
Query: 479 LVASVC 484
++ +C
Sbjct: 623 VIEKLC 628
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 64/351 (18%), Positives = 120/351 (34%), Gaps = 100/351 (28%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P +T L + K AL +E++ K +R + Y++++ + R++E
Sbjct: 301 FPDQITYNMLIHGLAKHGHADEALTFLRESEGK--RFRVDQVGYSAIVHSFCLNGRMSEA 358
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
KE+I +M C ++ + + R G+L++A + K++ + C T + LL
Sbjct: 359 KEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNG 418
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQ-------------------------------- 152
+ K K A L +S W S I
Sbjct: 419 LCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPT 478
Query: 153 --SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+NLL+ LC+ ++ A ++ +GC+ + ++ ++ G L A LL
Sbjct: 479 AVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLD 538
Query: 211 SMF--------------------------------------------------WRISQKG 220
M+ R +KG
Sbjct: 539 DMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKG 598
Query: 221 SGEDIV--------------IYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ ED++ Y ++ LC GK+ +A +L K+LR K
Sbjct: 599 AVEDLLNLLDKMLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVLRSASK 649
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 217/516 (42%), Gaps = 57/516 (11%)
Query: 10 TPTYLSQI----IKKQKSPLTALKIFKEA-KEKYPNYRHNGPVYASMIGILSESNRITEM 64
T T +S+I + P L F+ A K+ + +G V +S++ +L+ E+
Sbjct: 56 TDTRVSEIAHFVFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEI 115
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN-LSQFNCVNWTQSFNTLLK 123
+ +++ MK + I YA +G + EA+ L+ + NCV + N+LL
Sbjct: 116 ENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLN 175
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLN----LLMDVLCQCRRSDLALHVFQEMDF 179
+V K+E A R Y V N ++ LC+ + + H+ ++
Sbjct: 176 LLVHHGKVEIA-----RKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWG 230
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+GC P+ Y+ L+ G C + + A L F + KG + Y ++ A C +G
Sbjct: 231 KGCVPNIVFYNTLIDGYCKNGDIERANLL----FKELKVKGFLPTVKTYGAMINAFCKKG 286
Query: 240 KIQDAMQILEKILRKGL---------------------KAPKSRRHRI------DLC--- 269
K + ++L ++ +GL +A + R I D+
Sbjct: 287 KFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYN 346
Query: 270 -----PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
C+ G+ + A+ L+ A+ RG P+ SY+ + G V ++L EM
Sbjct: 347 TLINGSCSKGK-VREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSE 405
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G L+ Y A + L G VD AL V ++ M +G +P +YN+L+ GLC G
Sbjct: 406 RGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERG-ILPDANIYNVLMSGLCKKGRFP 464
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A L +M Q + LVDG R G EA ++ + + R V N +
Sbjct: 465 AAKQLLVEMLDQ-NVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAM 523
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I+G C G +A++ + M + PD +S+++
Sbjct: 524 IKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTII 559
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 196/475 (41%), Gaps = 55/475 (11%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + ++ E + +I++ G C + T I Y + G + A LFK L +
Sbjct: 212 LCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPT 271
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL----CQCR 165
+++ ++ K+ K EA L + E+K R +Q N ++D C+
Sbjct: 272 VKTYGAMINAFCKKGKFEAVDKLLV------EMKERGLAVSLQIFNGIIDARFKHGCEIE 325
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR---------- 215
+D + + GC PD +Y+ L+ G C+ ++ EA LL R
Sbjct: 326 AADAVRWMIE----SGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYT 381
Query: 216 ---------------------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+S++G D++ Y L+ L G++ A+ + +K++ +
Sbjct: 382 PLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMER 441
Query: 255 GLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
G+ P + + + + C G AK L+ E L + P + + G +
Sbjct: 442 GI-LPDANIYNVLMSGLCKKGR-FPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E K+ +G S+V A + K GM+++AL + + M G P Y+ +
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDAL-LCFKRMFNGVHSPDEFTYSTI 558
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ G + A+ M K+ C N T+ L++G CR+G A +V EEM
Sbjct: 559 IDGYVKQNDLRGALRMFGLMLKKT-CKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG 617
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA 488
+ P V TY +LI C GK +A + E+M+ +P+ + ++ LV + N
Sbjct: 618 FEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNG 672
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 181/446 (40%), Gaps = 45/446 (10%)
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E + + M CE + + T I G++ EA L ++ + S+ L+
Sbjct: 325 EAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLI 384
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL-----LMDVLCQCRRSDLALHVFQEM 177
K + A L + E+ R +L+L L+ L D+AL V +M
Sbjct: 385 HAFSKNGEYVRASELLI------EMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM 438
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+G PD Y++LM GLC R A LL M + D + TL+
Sbjct: 439 MERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML----DQNVTPDAFVNATLVDGFIR 494
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI-----RGG 292
G + +A ++ + + +G+ + CN ++N+AL+ G
Sbjct: 495 HGNLDEAKKLFQLTIERGIDT--------SVVECNAMIKGYCKYGMMNDALLCFKRMFNG 546
Query: 293 I--PSLASYSAMAIDLYNEGRIVEGD-KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ P +YS + ID Y + + G ++ M K P++V + + + ++G ++
Sbjct: 547 VHSPDEFTYSTI-IDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNR 605
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A E + EEM F P V Y IL+ C G A + ++M C+ N T+ L
Sbjct: 606 A-EKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN-KCIPNDATFNYL 663
Query: 410 VDGLCRDGRFLEASR--------VLE--EMLIRSYWPC-VETYNVLIRGLCSIGKQYEAV 458
V+GL + +S+ LE M+I W + YN ++ LC A+
Sbjct: 664 VNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPAL 723
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
++M+S+ PD + +L+ +C
Sbjct: 724 QLHDKMMSKGFPPDPVSFIALLHGLC 749
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E + +L+ M++K P+ ++A G+V EALE+ + VP V N L
Sbjct: 114 EIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSL 173
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
L L G +A +M + G V N T I+ GLC++G+ E ++E+ +
Sbjct: 174 LNLLVHHGKVEIARKVYDEMVDRNGDVDN-YTVCIVTKGLCKEGKVEEGRHLIEKRWGKG 232
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + YN LI G C G A + +E+ + LP + + +++ + C
Sbjct: 233 CVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFC 283
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 19/320 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ L + R K+++ +M + V AT + + R G L+EA LF+
Sbjct: 449 IYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLT 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ N ++K K + A + F R G ++ + ++
Sbjct: 509 IERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYV---KQ 565
Query: 167 SDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+DL AL +F M + C P+ ++ L+ G C + LN A +F + G +
Sbjct: 566 NDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE----KVFEEMRSFGFEPN 621
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKIL-RKGLKAPKSRRHRIDLCPCNDGEDIEGAKS- 282
+V Y L+ C +GK+ A E++L K + + + ++ N+G I +S
Sbjct: 622 VVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSN 681
Query: 283 --------LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
+ G +A+Y+++ + L + ++ D+M +KGF P V +
Sbjct: 682 SQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSF 741
Query: 335 EAKLAALFKDGMVDEALEVI 354
A L L +G + + VI
Sbjct: 742 IALLHGLCLEGRLQDWNNVI 761
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 110/276 (39%), Gaps = 20/276 (7%)
Query: 2 SVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
V P T + + KQ AL++F +K + N + S+I + +
Sbjct: 546 GVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK--TCKPNVVTFTSLINGFCRNGDL 603
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTL 121
++V ++M+ E + I + + G+L +A F+ + C+ +FN L
Sbjct: 604 NRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYL 663
Query: 122 LKEMVKESKLEAA------------HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ + + + + + GW+ RI + N ++ LCQ +
Sbjct: 664 VNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWD--WRIAAYNSILLCLCQHKMVKP 721
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL + +M +G PD S+ L+ GLC + RL + +++ F + + V Y
Sbjct: 722 ALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNF----NERQLQIAVKYS 777
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
L +G DA +L+ ++ K + + H+
Sbjct: 778 EKLDQFLSEGLTSDASLLLQTLVEKFKFHNQKKSHQ 813
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
KL A F+ V + +E + E M +PT + ++ +G A+ +
Sbjct: 104 KLLARFR---VFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDV 160
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI--RGLCSIGKQ 454
CV + L++ L G+ A +V +EM+ R+ V+ Y V I +GLC GK
Sbjct: 161 HNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRN--GDVDNYTVCIVTKGLCKEGKV 218
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
E +E+ + +P+I +++L+ C N
Sbjct: 219 EEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKN 250
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 190/448 (42%), Gaps = 19/448 (4%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+ +I L + K ++ +M K ++ I ++ G + +A +LF +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLC 162
+ Q++ +L++ +E + + L + E+K R + ++ +C
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLV------EMKKRNIVISPYTYGTVVKGMC 428
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
D A ++ +EM GC P+ Y L+K + R +A +L M ++G
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA 484
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
DI Y +L+ L ++ +A L +++ GLK P + + + + + A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEASEFASADK 543
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ E G +P+ + + + + +++E M +G Y + LF
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+ VD+A E+ E KG P V Y +L+ G GN A +M ++ G N
Sbjct: 604 KNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPN 661
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y +L+ G CR G +A +L+EM ++ P TY +I G C G EA +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 463 EMISQAKLPDISVWSSLVASVCCNTADL 490
EM + +PD V+++LV CC D+
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG-CCRLNDV 748
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 196/446 (43%), Gaps = 19/446 (4%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N +Y ++I +++R + V+ +MK + + I ++A +++EA S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA--HILFLRSCYGWEVKSRIQSLNLLMD 159
+ + ++ + ++ S+ +A ++ +R C K L ++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL---IN 565
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + A ++ M QG D ++Y +LM GL + ++++A + F + K
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI----FREMRGK 621
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIE 278
G D+ Y L+ G +Q A I ++++ +GL P + + L C GE IE
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGE-IE 679
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
AK L++E ++G P+ +Y + ID Y G + E ++ DEM+ KG P +Y
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTI-IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM---S 394
+ + V+ A+ + K + +N L+ + G + + L ++ S
Sbjct: 739 VDGCCRLNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
N TY I++D LC++G A + +M + P V TY L+ G +G++
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLV 480
E +E I+ PD ++S ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVII 882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 176/414 (42%), Gaps = 68/414 (16%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+D LC+ +R + A + EMD G D +Y +L+ GL R + A L++ M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 213 FWR---------------ISQKGSGE------DIVI----------YRTLLFALCDQGKI 241
+S++G E D +I Y +L+ C + +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ ++L ++ ++ + + C+ G D++GA +++ E + G P++ Y+
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG-DLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ R + +VL EM+ +G P + Y + + L K +DEA + EMV+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL-VEMVEN 516
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK-------------------------- 395
P Y + G +A A A Y+K+M +
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEA 576
Query: 396 --------QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
G + + +TY +L++GL ++ + +A + EM + P V +Y VLI G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+G +A +EM+ + P++ +++ L+ C + ++ ++ L+++S
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF-CRSGEIEKAKELLDEMS 689
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 175/441 (39%), Gaps = 45/441 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE--------- 132
+F Y G + EAV +F + V LL +++ ++L+
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 133 ----------AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS--------DLALHVF 174
H+L + C R ++ L DVL + + D AL +
Sbjct: 213 VERNVVFDVKTYHMLIIAHC-------RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ M +G P + +Y +L+ GLC +RL +A LL M G D Y L+
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSLDNHTYSLLIDG 321
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED--IEGAKSLINEALIRGG 292
L A ++ +++ G+ + + D C C ++ +E AK+L + + G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINI---KPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
IP +Y+++ E + +G ++L EM+ + S Y + + G +D A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+++E + G P V +Y L+K A+ LK+M +Q G + Y L+ G
Sbjct: 439 IVKEMIASGC-RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
L + R EA L EM+ P TY I G + A +++EM LP+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 473 ISVWSSLVASVCCNTADLNVC 493
+ + L+ C + C
Sbjct: 557 KVLCTGLINEYCKKEKVIEAC 577
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 184/454 (40%), Gaps = 57/454 (12%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC---KDSVFATA-IRTYARAGQLN 97
+ N Y + I E++ + + +M+ EC + V T I Y + ++
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVLPNKVLCTGLINEYCKKEKVI 574
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
EA S ++++ + +++ L+ + K K++ A +F R G + + S +L
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF-REMRGKGIAPDVFSYGVL 633
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ + A +F EM +G P+ Y++L+ G C + +A LL M S
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM----S 689
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCND- 273
KG + V Y T++ C G + +A ++ +++ KGL P S + + C ND
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDV 748
Query: 274 -------GEDIEGAKS---------------------------LINEALIRGGIPSLASY 299
G + +G S L++ + R G P+ +Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ M L EG + ++ +M+ P+++ Y + L K G E V +E +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM----SKQVGCVANGETYGILVDGLCR 415
G P +Y++++ G + A++ + +M + GC + T L+ G +
Sbjct: 869 AG-IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
G A +V+E M+ Y P T LI C
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 191/440 (43%), Gaps = 20/440 (4%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L + + E + + +MK C + + I Y + G+L E L + +
Sbjct: 205 VIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG 264
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C ++N L+ K +E A+ F V + + +L+ +D C+ A
Sbjct: 265 CAADVVTYNALINCFSKFGWIEKAYSYF-GEMKRLGVMANVVTLSTFVDAFCKEGLVREA 323
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F +M +G P+ +Y L+ G C RL++A LL M +G ++V Y
Sbjct: 324 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV----HQGLVPNVVTYTV 379
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPK------SRRHRIDLCPCNDGEDIEGAKSLI 284
++ LC +GK+ A +L + R G+KA + H ++ ++ E A L+
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN-------KNSERALDLL 432
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
NE +G ++ Y + L ++ E +L +M G P+ V+Y + A FK
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G EA+ ++ + G P V Y L+ GLC AG+ A+ + KM +++G N +
Sbjct: 493 GKESEAVALLHKIPDSG-LQPNVVTYCALIDGLCKAGSIYEAISHFDKM-RELGLDPNVQ 550
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y L+DG C+ G +A ++ EM+ + Y LI G G A +M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610
Query: 465 ISQAKLPDISVWSSLVASVC 484
I D+ ++ ++ C
Sbjct: 611 IETGLQLDLYCYTCFISGFC 630
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 184/435 (42%), Gaps = 39/435 (8%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
SVF T + A G L++AV + Q T++ N +L + + + +R
Sbjct: 134 SVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG-----LVR 188
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + + N+++D LC+ A +F M GC PD +Y+ L+ G
Sbjct: 189 RLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248
Query: 201 RLNEATHLL-------------------------------YSMFWRISQKGSGEDIVIYR 229
L E L+ YS F + + G ++V
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
T + A C +G +++AM++ ++ +G+ + + C G ++ A L++E +
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR-LDDAIVLLDEMVH 367
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+G +P++ +Y+ M L EG++ D VL M G + ++Y + F + +
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
AL+++ E KG + V +Y L+ GLC A L KM G N Y +
Sbjct: 428 ALDLLNEMKNKGMEL-DVSLYGTLIWGLCKVQKLDEAKSLLHKMD-DCGLRPNTVIYTTI 485
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+D + G+ EA +L ++ P V TY LI GLC G YEA+ ++M
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545
Query: 470 LPDISVWSSLVASVC 484
P++ V+++L+ C
Sbjct: 546 DPNVQVYTTLIDGFC 560
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 124/313 (39%), Gaps = 18/313 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y M+ L + ++ +V+ M+ + + ++ T I + A+ L
Sbjct: 373 NVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLL 432
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVL 161
+ + TL+ + K KL+ A L + C G + I + +MD
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDC-GLRPNTVIYT--TIMDAF 489
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ + A+ + ++ G P+ +Y L+ GLC + EA S F ++ + G
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI----SHFDKMRELGL 545
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE----DI 277
++ +Y TL+ C G + A+ ++ +++ KG+ K + DG D+
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK-----VVYTSLIDGHMKQGDL 600
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+GA +L + + G L Y+ N + E VL EM G P Y
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCL 660
Query: 338 LAALFKDGMVDEA 350
+ K G ++EA
Sbjct: 661 IRKYQKLGNMEEA 673
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 46/233 (19%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDS--VFA 84
AL + E K K + +Y ++I L + ++ E K ++ +M D C + + ++
Sbjct: 428 ALDLLNEMKNK--GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM--DDCGLRPNTVIYT 483
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T + + +AG+ +EAV+L + +S L+ + +
Sbjct: 484 TIMDAFFKAGKESEAVALLHK--------------------IPDSGLQPNVVTYCA---- 519
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
L+D LC+ A+ F +M G P+ + Y L+ G C L++
Sbjct: 520 ------------LIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSK 567
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
A HL+ M KG D V+Y +L+ QG +Q A + K++ GL+
Sbjct: 568 AVHLMNEMV----DKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 41/366 (11%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGW--EVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
SFN L ++ ++S AA LF R EV + + ++L+ C+ R DL
Sbjct: 60 SFNRTLTDVARDSP-AAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAAL 118
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ +G + ++ L+KGLC D+R ++A ++ R+++ D+ LL
Sbjct: 119 GNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIV---LRRMTELSCMPDVFSCTILLKG 175
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LCD+ + Q+A+++L + +D G G P
Sbjct: 176 LCDENRSQEALELLHMM----------------------ADDRGG-----------GSPP 202
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SY+ + + EG + EM + P++V Y + +AAL K +D+A+EV+
Sbjct: 203 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVL 262
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
MVK +P YN +L G C +G A+ LKKM + G N TY L++ LC
Sbjct: 263 NT-MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYRSLMNYLC 320
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
++GR EA ++ + M R P + TY L++G + G E L+ M+ PD
Sbjct: 321 KNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 380
Query: 475 VWSSLV 480
V++ L+
Sbjct: 381 VFNILI 386
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 12/335 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 107 RAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDV 166
Query: 152 QSLNLLMDVLCQCRRSDLAL---HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
S +L+ LC RS AL H+ + G PD SY ++ G + ++A
Sbjct: 167 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA--- 223
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
YS + + + ++V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 224 -YSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 282
Query: 269 CPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C+ G+ E +L + + G+ P++ +Y ++ L GR E K+ D M +G
Sbjct: 283 GYCSSGQPKEAIGTL--KKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGL 340
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P + Y L G + E + + + MV+ P V+NIL+ A+
Sbjct: 341 EPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 399
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
+ KM +Q G N YG ++D LC+ G +A
Sbjct: 400 LVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDA 433
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 280 AKSLINEALIRGG----IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A SL N + R G P L +YS + GR+ G L + KGF + +
Sbjct: 76 AVSLFNR-MARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFA 134
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
L L D +A++++ M + + +P V ILLKGLCD S A+ L M+
Sbjct: 135 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 194
Query: 396 QVGCVANGE--TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
G + + +Y +++G ++G +A EML R P V TY+ +I LC
Sbjct: 195 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQA 254
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+A+ L M+ +PD ++S++ C
Sbjct: 255 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 285
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 46/285 (16%)
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S + V++T N KE + H + R + + + + ++ LC+ +
Sbjct: 200 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-----RISPNVVTYSSIIAALCKAQA 254
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ V M G PD +Y+ ++ G C+ + EA L M G ++V
Sbjct: 255 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM----RSDGVEPNVV 310
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
YR+L+ LC G+ +A +I + + ++GL+
Sbjct: 311 TYRSLMNYLCKNGRCTEARKIFDSMTKRGLE----------------------------- 341
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
P +A+Y + +G +VE +LD M G P ++ + A K
Sbjct: 342 -------PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 394
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
VD+A+ V +M + P V Y ++ LC +G+ A++Y +
Sbjct: 395 VDQAMLVF-SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 227/535 (42%), Gaps = 57/535 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK---YPNYRHNGPVYASMIGILSESNRIT 62
P ++ L + +QK A K+++E ++ + NY M+ L + ++
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYS-----VCIMVRGLCKERKVE 222
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
E +++I+ G C + T + Y + G + A LFK L + T+++ ++
Sbjct: 223 EGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMI 282
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEM 177
+ K+ +A L + E+K R +Q N ++D + + +
Sbjct: 283 NGLCKKCNFKAVDGLLV------EMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI 336
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLL---------------------------- 209
GC PD +Y+ L+ G C D +++EA LL
Sbjct: 337 TENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKC 396
Query: 210 ---YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ +F +++KG D+V Y L+ L G++ A+ + +K++ +G+ + + +
Sbjct: 397 LRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVL 456
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTK 325
C G + AK L+ E ++ + A SA +D + G++ E K+ + K
Sbjct: 457 MNGLCKKGR-LSAAKLLLVE-MLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAK 514
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y A + K GM+++AL ++ M G P Y+ ++ G +
Sbjct: 515 GMDPGVVGYNAMIKGYCKFGMMNDALTCVQR-MKDGDHSPDEFTYSTIIDGYVKQNDLHN 573
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +M KQ C N TY L++G CR G A + EEM P V TY +LI
Sbjct: 574 ALKLFGQMVKQ-KCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILI 632
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN--TADLNVCRKTLE 498
C GK +A + E M+ +P+ ++ L+ + N TA N ++LE
Sbjct: 633 GCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLE 687
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 212/507 (41%), Gaps = 57/507 (11%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYP-NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
+ + + P LK+F+ A ++ N +G +S++ +L+ E++ +++ MK
Sbjct: 70 VFDRIRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKD 129
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSF---NTLLKEMVKESKLE 132
+ + Y +G +N A+ L+ ++ N+ N LL ++++ K+E
Sbjct: 130 LAPTREALSFVVGAYVDSGLVNRALELYH--IAYDIHNYLPDVIACNALLNALIQQKKVE 187
Query: 133 AAHILFLRSCYGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD--- 185
A R Y VK S+ +++ LC+ R+ + + + +GC P+
Sbjct: 188 IA-----RKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVF 242
Query: 186 --------------------------------RESYHILMKGLCNDRRLNEATHLLYSMF 213
E+Y I++ GLC LL M
Sbjct: 243 YNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEM- 301
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
++G ++ +Y +++ A G + + L I G + + + + C D
Sbjct: 302 ---KERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRD 358
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G+ + A+ L+ A+ RG P+ SY+ + +G+ + + M KG LV
Sbjct: 359 GK-VHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVA 417
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y A + L G VD AL V ++MV+ +P VYN+L+ GLC G + A + L +M
Sbjct: 418 YGALVHGLVAAGEVDVALTV-RDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEM 476
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
Q + LVDG R G+ EA ++ E + + P V YN +I+G C G
Sbjct: 477 LHQ-NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGM 535
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLV 480
+A+ ++ M PD +S+++
Sbjct: 536 MNDALTCVQRMKDGDHSPDEFTYSTII 562
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 181/462 (39%), Gaps = 57/462 (12%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY S++ + E+ + + + + CE + + T I R G+++EA L
Sbjct: 309 NVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR---IQSLNLLMDV 160
++ + S+ L+ K+ K A LF+ G K + + L+
Sbjct: 369 EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFI----GMTEKGHPLDLVAYGALVHG 424
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------- 212
L D+AL V +M +G PD Y++LM GLC RL+ A LL M
Sbjct: 425 LVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLD 484
Query: 213 -----------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
F KG +V Y ++ C G + DA+ ++
Sbjct: 485 AFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+ ++ G +P + + D+ A L + + + P++ +Y+++
Sbjct: 545 R-MKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRT 603
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G +K +EMR+ G P++V Y + K+G + +A E M+ +P
Sbjct: 604 GDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFEL-MLLNRCIPNDVT 662
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGC----------VANG-----ETYGILVDGLC 414
+N L+ GL + N A AV S ++ +++G Y ++ LC
Sbjct: 663 FNYLINGLTN--NLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLC 720
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
A ++ ++M + +P ++ L+ GLC G+ E
Sbjct: 721 HHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 282 SLINEAL--------IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLV 332
L+N AL I +P + + +A+ L + ++ KV +EM + G W +
Sbjct: 148 GLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYS 207
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+ + L K+ V+E ++I + KG +P + YN L+ G G+ A K+
Sbjct: 208 VC-IMVRGLCKERKVEEGRKLINDRWGKGC-IPNIVFYNTLVDGYWKRGDVERANGLFKE 265
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
+ K G + ETYGI+++GLC+ F +L EM R V+ YN ++ G
Sbjct: 266 L-KMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHG 324
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ E L + PDI+ +++L++ C
Sbjct: 325 CKIEVGKTLRWITENGCEPDITTYNTLISGSC 356
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
VE + +L+ M+ K P+ + A G+V+ ALE+ ++P V N
Sbjct: 115 FVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACN 174
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
LL L +A ++M K+ GC N + I+V GLC++ + E +++ +
Sbjct: 175 ALLNALIQQKKVEIARKVYEEMVKRDGCWDN-YSVCIMVRGLCKERKVEEGRKLINDRWG 233
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CN 486
+ P + YN L+ G G A +E+ + LP + ++ +C CN
Sbjct: 234 KGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCN 290
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 20 KQKSPLTALKIFKE-AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
KQ ALK+F + K+K + N Y S+I + + ++ ++M+ +
Sbjct: 567 KQNDLHNALKLFGQMVKQKC---KPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKP 623
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK----------- 127
+ I + + G++++A S F+ + C+ +FN L+ +
Sbjct: 624 NVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKAN 683
Query: 128 ES-KLEAAHIL-FLRSCY--GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
ES +++A+ ++ F R+ GWE R+ + N ++ LC + + AL + +M +G +
Sbjct: 684 ESLEIKASLMMDFFRTMISDGWE--QRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIF 741
Query: 184 PDRESYHILMKGLCNDRRLNE 204
PD S+ L+ GLC + R E
Sbjct: 742 PDPVSFAALVYGLCLEGRSKE 762
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 184/440 (41%), Gaps = 43/440 (9%)
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
C SVF IR Y R G + +++ +F+ + + + N +L +VK + + +
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCE-DVSV 177
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
FL+ ++ + + N+L++VLC + ++ Q+M+ G P +Y+ ++
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
C R A LL M + KG D+ Y L+ LC + +L +RK
Sbjct: 238 YCKKGRFKAAIELLDHM----NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD-MRKR 292
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P + L ++ + A+ L+NE L G P+ +++A+ +EG E
Sbjct: 293 MIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 316 DKVLDEMRTKG--------------------------FWPSL---------VMYEAKLAA 340
K+ M KG F+ + + Y +
Sbjct: 353 LKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K+G +DEA+ V+ EM K P + Y+ L+ G C G A + ++ + VG
Sbjct: 413 LCKNGFLDEAV-VMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR-VGLS 470
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
NG Y L+ CR G E R+ E M++ P T+NVL+ LC GK EA +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 461 LEEMISQAKLPDISVWSSLV 480
+ M S LP+ + L+
Sbjct: 531 MRCMTSDGILPNAVSFDCLI 550
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 197/471 (41%), Gaps = 40/471 (8%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ S ++ ++++++M F I + G EA+ +F
Sbjct: 297 NEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + S+ LL + K ++ + A ++R RI ++ D LC+
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI-DGLCK 415
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A+ + EM G PD +Y L+ G C RL A ++ RI + G
Sbjct: 416 NGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIV----CRIYRVGLSP 471
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKG---------------LKAPK-SRRHRID 267
+ +IY TL++ C G +++ ++I E ++ +G KA K +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 268 LCPCNDG----------------EDIEGAK--SLINEALIRGGIPSLASYSAMAIDLYNE 309
C +DG EG K S+ +E G P+ +Y ++ L
Sbjct: 532 RCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G ++ +K L ++ VM + A+ K G +D+A+ + EMV+ + +P
Sbjct: 592 GHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLF-GEMVQRSILPDSFT 650
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y L+ GLC G + +A+++ K+ + V N Y VDG+ + G++ ++M
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQM 710
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V T N +I G +GK + L EM +Q + P+++ ++ L+
Sbjct: 711 DKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILL 761
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 175/403 (43%), Gaps = 8/403 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T + Y + G+ A+ L +++ ++N L+ ++ + ++ A L LR
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR-SAKGYLLLRD 288
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + N L++ + +A + EM G P+ +++ L+ G ++
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
EA MF + KG V Y LL LC + A ++ R G+ +
Sbjct: 349 FKEA----LKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C +G ++ A ++NE G P + +YSA+ GR+ +++
Sbjct: 405 TYTGMIDGLCKNGF-LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
+ G P+ ++Y + + G + E + + E +++G P +N+L+ LC AG
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGN-TPDHFTFNVLVTSLCKAG 522
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A A +++ M+ G + N ++ L++G G L+A V +EM + P TY
Sbjct: 523 KVAEAEEFMRCMTSD-GILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L++GLC G A +L+ + + D + ++L+ ++C
Sbjct: 582 GSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMC 624
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 156/374 (41%), Gaps = 41/374 (10%)
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
LK +VK+ L+ HI +Q + +L + R D A H+ +E+
Sbjct: 56 FLKWVVKQPGLDTDHI--------------VQLFCITTHILVRARMYDPARHILKELSLM 101
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
+ S+ + L RL + ++ + R+ + +G
Sbjct: 102 ---SGKSSF--VFGALMATYRLCNSNPSVFDILIRVYLR------------------EGM 138
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
IQD+++I + G + I ED+ S + E L R P +A+++
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS-VWSFLKEMLKRKICPDVATFN 197
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L EG + ++ +M G+ P++V Y L K G A+E+++ +K
Sbjct: 198 ILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLK 257
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G V YN+L+ LC + SA + L+ M K++ N TY L++G +G+ L
Sbjct: 258 GV-NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRM-IHPNEVTYNTLLNGFSNEGKVL 315
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
A ++L EML P T+N LI G S G EA+ M ++ + + L+
Sbjct: 316 IARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLL 375
Query: 481 ASVCCNTADLNVCR 494
+C N A+ ++ R
Sbjct: 376 DGLCKN-AEFDLAR 388
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 204/497 (41%), Gaps = 50/497 (10%)
Query: 25 LTALKIFKEAKE--KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV 82
L A +F E + +P + Y S++ L + + ++ + ++ +
Sbjct: 560 LKAFSVFDEMTKVGHHPTFF----TYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVM 615
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-- 140
T I ++G L++AVSLF + Q + + + ++ +L+ + ++ K A ILF +
Sbjct: 616 CNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIA-ILFAKEA 674
Query: 141 -------------SCY------------GWEVKSRIQSLNLLMDVLC---------QCRR 166
+C+ G+ + ++ L L DV+ + +
Sbjct: 675 EARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGK 734
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ + EM Q P+ +Y+IL+ G + ++ + L SM G D +
Sbjct: 735 IEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMIL----SGILPDKL 790
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+++ +C+ ++ ++IL+ + +G++ + + + C +GE I A ++N
Sbjct: 791 TCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGE-INWAFDMVNV 849
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + A+ L R E VL EM +G P Y L L + G
Sbjct: 850 MTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGD 909
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ A V++EEM+ P + +++ L G + A + L+ M K + V ++
Sbjct: 910 IKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLK-MKLVPTIASF 967
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ C++G EA + M + +YNVLI GLC+ G A EEM
Sbjct: 968 TTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKR 1027
Query: 467 QAKLPDISVWSSLVASV 483
L +++ + +LV +
Sbjct: 1028 DGFLANVTTYKALVGGI 1044
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 155/384 (40%), Gaps = 9/384 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
+AGQ + + + + N ++ + K+E H L +
Sbjct: 696 KAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMG-NQNQGPNL 754
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+L+ + + + +++ M G PD+ + + ++ G+C L +L +
Sbjct: 755 TTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKA 814
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
R G D + L+ C G+I A ++ + G+ K+ I +
Sbjct: 815 FICR----GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAI-VSVL 869
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
N + ++ +++E +G P Y + L G I V +EM P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V A + AL K G DEA ++ M+K VPT+ + L+ C GN A + L+
Sbjct: 930 VAESAMVRALAKCGKADEA-SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEA-LELR 987
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+ G + +Y +L+ GLC G A + EEM + V TY L+ G+ S
Sbjct: 988 VVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQ 1047
Query: 452 GKQYEAV-MWLEEMISQAKLPDIS 474
G ++ + L++++++ + +S
Sbjct: 1048 GTEFSGTDIILKDLLARGFITAMS 1071
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 187/480 (38%), Gaps = 52/480 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ ++ L ++ ++ E +E + M D F I Y +G+ +A S+F +
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEM 569
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ ++ +LLK + K L AA FL+S N L+ +C+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLIAAE-KFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA---------------THLLYS 211
D A+ +F EM + PD +Y L+ GLC + A ++Y+
Sbjct: 629 LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688
Query: 212 MF---------WR--------ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
F W+ + + G D+V ++ GKI+ +L ++ +
Sbjct: 689 CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ P + I L + + + + L ++ G +P + ++ + + +
Sbjct: 749 N-QGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEI 807
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G K+L +G + ++ +G ++ A +++ G L
Sbjct: 808 GLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI---------SLD 858
Query: 375 KGLCDAGNSAV--------AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
K CDA S + + M L +MSKQ G Y L++GLCR G A V
Sbjct: 859 KNTCDAIVSVLNRNHRFQESRMVLHEMSKQ-GISPESRKYIGLLNGLCRVGDIKTAFVVK 917
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
EEM+ P + ++R L GK EA + L M+ +P I+ +++L+ C N
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 14/360 (3%)
Query: 79 KDSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+D V A I Y+R G++ + L + N ++N LL K + + +L
Sbjct: 717 RDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFML 776
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ + ++ ++++ + C+ ++ L + + +G DR ++++L+ C
Sbjct: 777 YRSMILSGILPDKLTCYSIILGI-CESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCC 835
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ +N A + M ++ G D ++ L + Q++ +L ++ ++G+
Sbjct: 836 ANGEINWA----FDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGI- 890
Query: 258 APKSRRHRIDLCP--CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+P+SR++ I L C G DI+ A + E + P + SAM L G+ E
Sbjct: 891 SPESRKY-IGLLNGLCRVG-DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+L M P++ + + K+G V EALE + M + YN+L+
Sbjct: 949 SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALE-LRVVMSNCGLKLDLVSYNVLIT 1007
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG-RFLEASRVLEEMLIRSY 434
GLC G+ A+A ++M K+ G +AN TY LV G+ G F +L+++L R +
Sbjct: 1008 GLCAKGDMAIAFELFEEM-KRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGF 1066
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 195/472 (41%), Gaps = 44/472 (9%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ L +SN + + V D M +ATAI Y + G+++EAV LF + +
Sbjct: 212 LMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGG 271
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLR----------SCYGWEVKSRIQ-------- 152
+ ++N L+ + K +LE A + R YG V ++
Sbjct: 272 VLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEAN 331
Query: 153 ----------------SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
N L+D + D AL V +M +G P+ +++ L++G
Sbjct: 332 SVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGF 391
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
C ++ +A +L + + ED Y +L LC K A++I++ +L + +
Sbjct: 392 CRTNQMEQAEQVLEYLLSNVLS--VNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNI 447
Query: 257 KAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
K S + LC C G+ +E A +G + + +A+ L G + E
Sbjct: 448 KVNDSLLTLLVCGLCKC--GKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEE 505
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
V EM +G + Y + K G ++EA + ++E+M+K F P YN L+
Sbjct: 506 VFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK-LKEKMMKQGFKPDTYTYNFLM 564
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
KGL D G L + +K G V N TY ++++G C R A + +++
Sbjct: 565 KGLADKGKMDDVGRVLHE-AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
YN+LI G EA + M S P I +SS++ +CCN
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCN 675
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 204/473 (43%), Gaps = 42/473 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ L + + E V+ +M + VF I Y+R G +++A+ + ++
Sbjct: 313 TYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDM 372
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA-----------------------HIL------ 137
+ + NTLL+ + +++E A H+L
Sbjct: 373 TLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKF 432
Query: 138 -----FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV-FQEMDFQGCYPDRESYHI 191
+++ +K L LL+ LC+C + A+ + F+ D +G + + +
Sbjct: 433 DSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNA 492
Query: 192 LMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKI 251
L+ GLC + E ++ + + ++G D + Y TL+F C GKI++A ++ EK+
Sbjct: 493 LLYGLCERGNMEE----VFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+++G K P + + + D ++ +++EA G +P++ +Y+ M N R
Sbjct: 549 MKQGFK-PDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADR 607
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
I + +++ S V+Y +AA K G EA + + + M PT+ Y+
Sbjct: 608 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFK-LRDAMRSSNIHPTIFTYS 666
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
++ G+C A ++M + G + N Y L+ G C+ G+ + +L+EM
Sbjct: 667 SIIHGMCCNDLVEEAKGIFEEMRNE-GLMPNVFCYTALIGGYCKLGQMDQIESILQEMTS 725
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TY ++I G C +G EA L EMI+ PD ++ L C
Sbjct: 726 NCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYC 778
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 167/379 (44%), Gaps = 8/379 (2%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G L++A++ F + N FN LL +V+ K E LF + +K + +
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLF-KEMEFRGIKYNVCT 77
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L++L++ C D VF + +G PD + L+ G+C + A LL M
Sbjct: 78 LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM- 136
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
G D+V +L+ C QGKI +I ++ KGLK P + I +
Sbjct: 137 ---GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLK-PDVYSYSIFINGYCK 192
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
E I+ A L +E RG +P+ +Y+ + L R + + +M G P ++
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L K G +DE L V+ +EM + P + VY I++ G+C + A L ++
Sbjct: 253 YSTLLDGFCKQGNLDEML-VLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ G + TY LVDGLCR+G +EA R+ +M P +YNVL++G
Sbjct: 312 IVE-GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHND 370
Query: 454 QYEAVMWLEEMISQAKLPD 472
V + EM + D
Sbjct: 371 TSTVVQLIHEMADRGFYAD 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 42/334 (12%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I N L+ + + ++ + + +F+EM+F+G + + IL+ C ++ +
Sbjct: 40 IIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYG----F 95
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
S+F + ++G D+VI+ TL+ +C GK
Sbjct: 96 SVFGKTLKRGFKPDVVIFTTLIDGVCRIGKT----------------------------- 126
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
E A L+ E + G +P + + +++ ++G+I + K+ M +KG P
Sbjct: 127 -------ELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPD 179
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + K +DEA+E+ +E +G VP YN L+K LC A A +
Sbjct: 180 VYSYSIFINGYCKVEKIDEAMELFDEMSHRGV-VPNAVTYNTLIKALCQALRPRDAQVLF 238
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+KM G + Y L+DG C+ G E + +EM R P + Y ++I G+C
Sbjct: 239 RKMC-ACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCR 297
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K +A L +I + PD+ +++LV +C
Sbjct: 298 SRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLC 331
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F T I R G+ A L K + CV + N+L++ + K++ +F
Sbjct: 112 IFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIF-HL 170
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K + S ++ ++ C+ + D A+ +F EM +G P+ +Y+ L+K LC R
Sbjct: 171 MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALR 230
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A L F ++ G DI+ Y TLL C QG + D M +L + +++ L P
Sbjct: 231 PRDAQVL----FRKMCACGLSPDILAYSTLLDGFCKQGNL-DEMLVLFQEMQRRLVKPDL 285
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ I + ++ AK +++ ++ G P + +Y+A+ L EG I+E ++ +
Sbjct: 286 VVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRK 345
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
M G P Y L + +++I E +G + V
Sbjct: 346 MEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAV 391
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
G + DA+ ++L + + P +R+ L + E SL E RG ++ +
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRL-LSSVVRMKKYETVVSLFKEMEFRGIKYNVCT 77
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
S + + G V + +GF P +V++ + + + G + A +++E
Sbjct: 78 LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137
Query: 359 VKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+ G VP V N L++G C G V ++ +SK G + +Y I ++G C+
Sbjct: 138 LVGC-VPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSK--GLKPDVYSYSIFINGYCKVE 194
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ EA + +EM R P TYN LI+ LC + +A + +M + PDI +S
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254
Query: 478 SLVASVC 484
+L+ C
Sbjct: 255 TLLDGFC 261
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 13/398 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ L + N EM+ V +M + + F I +AG+LN+A + +++ +
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 111 CVNWTQSFNTLLKEMVKES---KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++NTL+ K+ K+ A + L+ ++ + N L+D C+
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAI-LKEMLANKICPNEITFNTLIDGFCKDENV 289
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKGSGEDIV 226
A + F+EM QG P+ +Y+ L+ GL N+ +L+EA L W ++ G +IV
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL-----WDKMVGLGLKPNIV 344
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ L+ C + I++A ++ + I + L + + C G EG +L N
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF-ALHNS 403
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L G P++++Y+ + L + K+L+EM +V Y + KDG
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A E + EM+ P YN L+ G C GN A+ +M K+ G AN TY
Sbjct: 464 PSKA-EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKE-GKRANVVTY 521
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+L+ G C+ G+ +A+R+L EML + P TY+V+
Sbjct: 522 NVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 17/366 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ------CRRSDLA 170
+FN + + K KL A + + W I + N L+D C+ R+D
Sbjct: 202 TFNIFINGLCKAGKLNKAEDV-IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD-- 258
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +EM P+ +++ L+ G C D + A + F + ++G +IV Y +
Sbjct: 259 -AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN----AFEEMQRQGLKPNIVTYNS 313
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ L + GK+ +A+ + +K++ GLK + + C + I+ A+ L ++ +
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK-KMIKEARKLFDDIAEQ 372
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
+P+ +++ M G + EG + + M +G +P++ Y +A L ++ V A
Sbjct: 373 DLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAA 432
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+++ E M V YNIL+ G C G + A L +M VG N TY L+
Sbjct: 433 KKLLNE-MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML-NVGVKPNHVTYNTLM 490
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
DG C +G A +V +M V TYNVLI+G C GK +A L EM+ +
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550
Query: 471 PDISVW 476
P+ + +
Sbjct: 551 PNRTTY 556
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 222/496 (44%), Gaps = 37/496 (7%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
+L Q+ L+ F+ +++++ + ++ +L+ S + ++++ +D++
Sbjct: 47 FLDQLFNAGVDSELVLRFFQWSQKEF-RISYGLETTGKVLHLLANSKKYSKVRSFLDKLV 105
Query: 73 GDSCECKDSVF-----------ATAIRT------YARAGQLNEAVSLFKNLSQFNCVNWT 115
+ SVF A A+ T Y +++ A +F+ + +
Sbjct: 106 KNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSL 165
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLAL 171
S N LL +VK + E + ++ Y +K RIQ + N+ ++ LC+ + + A
Sbjct: 166 NSCNPLLSALVKGN--ETGEMQYV---YKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAE 220
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDR---RLNEATHLLYSMFWRISQKGSGEDIVIY 228
V +++ G P+ +Y+ L+ G C ++ A +L M ++ K +I +
Sbjct: 221 DVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM---LANKICPNEIT-F 276
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
TL+ C + A E++ R+GLK + + N+G+ ++ A +L ++ +
Sbjct: 277 NTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK-LDEAIALWDKMV 335
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G P++ +++A+ + I E K+ D++ + P+ + + + A K GM++
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
E + + +G F P V YN L+ GLC N A L +M + A+ TY I
Sbjct: 396 EGFALHNSMLDEGIF-PNVSTYNCLIAGLCRNQNVRAAKKLLNEM-ENYELKADVVTYNI 453
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G C+DG +A ++L EML P TYN L+ G C G A+ +M +
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 469 KLPDISVWSSLVASVC 484
K ++ ++ L+ C
Sbjct: 514 KRANVVTYNVLIKGFC 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 138/355 (38%), Gaps = 52/355 (14%)
Query: 156 LLMDVLCQCRRSDLALH----VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
L+ D+L ++L +H VF+ + G S + L+ L E ++
Sbjct: 131 LITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKE 190
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M R Q ++ + + LC GK+ A ++E I G
Sbjct: 191 MIKRRIQ----PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFS-------------- 232
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY----NEGRIVEGDKVLDEMRTKGF 327
P++ +Y+ + ID + + G++ D +L EM
Sbjct: 233 ----------------------PNIVTYNTL-IDGHCKKGSAGKMYRADAILKEMLANKI 269
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P+ + + + KD V A EE M + P + YN L+ GL + G A+
Sbjct: 270 CPNEITFNTLIDGFCKDENVLAAKNAFEE-MQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
KM +G N T+ L++G C+ EA ++ +++ + P T+N +I
Sbjct: 329 ALWDKMV-GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDA 387
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
C G E M+ + P++S ++ L+A +C N ++ +K L ++ +
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRN-QNVRAAKKLLNEMEN 441
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 141/331 (42%), Gaps = 25/331 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I + + K ++M+ + + + I + G+L+EA++L+
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ +FN L+ K+ ++ A LF V + I + N ++D C+
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI-TFNTMIDAFCK 390
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + M +G +P+ +Y+ L+ GLC ++ + A LL M
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM----ENYELKA 446
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+V Y L+ C G+ A ++L ++L G+K + + C +G +++ A +
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG-NLKAALKV 505
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ G ++ +Y+ + G++ + +++L+EM KG P+ Y
Sbjct: 506 RTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY--------- 556
Query: 344 DGMVDEALEVIEEEMVKGTFVPTV--RVYNI 372
+V+ EM++ F+P + +YNI
Sbjct: 557 --------DVVRLEMLEKGFIPDIEGHLYNI 579
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 180/373 (48%), Gaps = 30/373 (8%)
Query: 135 HILFLRSCYGWEVKSRIQSL---------------NLLMDVLCQCRRSDLALHVFQEMDF 179
H++ +C G +S +++L NL++ +C+ D + + +++
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------FWRISQKGSGEDIVIYRTLLF 233
GC PD SY+ ++KGLC +R ++ L+ M ++ + G D+ +Y T++
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIID 266
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
+C G + A IL ++ GLK P + L E E A+ L+ E + +
Sbjct: 267 GICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAERWEEAEDLLAE-MFQEDC 324
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKV---LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P + +D + + +V D+V L++M G P ++ Y + K+G+VDEA
Sbjct: 325 PLDDVTFNILVDFFCQNGLV--DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEA 382
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ +++ G P Y I+LKGLC A A + M +Q GC+ N T+ L+
Sbjct: 383 VMLLKNMSACGC-KPNTISYTIVLKGLCRAERWVDAQELISHMIQQ-GCLPNPVTFNTLI 440
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ +C+ G +A +L++ML+ P + +Y+ +I GL GK EA+ L MI++
Sbjct: 441 NFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 500
Query: 471 PDISVWSSLVASV 483
P+ ++SS+ +++
Sbjct: 501 PNTIIYSSMASAL 513
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 169/373 (45%), Gaps = 10/373 (2%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
+ + E + QM C ++AT I + G A + + + +NT
Sbjct: 239 MVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNT 298
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
+LK + + E A L L + + + N+L+D CQ D + + ++M
Sbjct: 299 VLKGLCSAERWEEAEDL-LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGK 240
GC PD +Y ++ G C + ++EA LL +M S G + + Y +L LC +
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNM----SACGCKPNTISYTIVLKGLCRAER 413
Query: 241 IQDAMQILEKILRKG-LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
DA +++ ++++G L P + I+ C G E A L+ + L+ G P L SY
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFM-CKKGL-AEQAIELLKQMLVNGCSPDLISY 471
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + L G+ E ++L+ M KG P+ ++Y + +AL ++G D+ +++ + +
Sbjct: 472 STVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMF-DSIQ 530
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
T +YN ++ LC + A+ + M GC+ N TY IL+ GL +G
Sbjct: 531 DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTILIRGLASEGLV 589
Query: 420 LEASRVLEEMLIR 432
EA +L E+ R
Sbjct: 590 REAQDLLSELCSR 602
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 189/451 (41%), Gaps = 18/451 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L I + V+D+M C + + R G AV
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ L C + + N ++ + ++ ++ + LR + + I S N ++ LC
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEG-VELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 164 CRRSD---------LALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+R D + +H +M GC PD Y ++ G+C D A +L
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS--- 282
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ G ++V Y T+L LC + ++A +L ++ ++ + + C +
Sbjct: 283 -RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++ L+ + L G IP + +Y+ + EG + E +L M G P+ +
Sbjct: 342 GL-VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L L + +A E+I M++ +P +N L+ +C G + A+ LK+M
Sbjct: 401 YTIVLKGLCRAERWVDAQELISH-MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
GC + +Y ++DGL + G+ EA +L M+ + P Y+ + L G+
Sbjct: 460 LVN-GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + + + D ++++++++S+C
Sbjct: 519 TDKIIQMFDSIQDATVRSDAALYNAVISSLC 549
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 22/399 (5%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR--- 150
G ++E V L + L F C S+N +LK + + + L + E S+
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPE 251
Query: 151 ------IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
++ ++D +C+ ++A + M G P+ Y+ ++KGLC+ R E
Sbjct: 252 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 311
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A LL MF Q+ D V + L+ C G + +++LE++L G
Sbjct: 312 AEDLLAEMF----QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYT 367
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ C +G ++ A L+ G P+ SY+ + L R V+ +++ M
Sbjct: 368 TVINGFCKEGL-VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 426
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P+ V + + + K G+ ++A+E++++ +V G P + Y+ ++ GL AG +
Sbjct: 427 QGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS-PDLISYSTVIDGLGKAGKTE 485
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR---FLEASRVLEEMLIRSYWPCVETY 441
A+ L M + G N Y + L R+GR ++ +++ +RS Y
Sbjct: 486 EALELLNVMINK-GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD---AALY 541
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
N +I LC + A+ + M+S +P+ S ++ L+
Sbjct: 542 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 580
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 6/275 (2%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ ++ + + E+++QM C + T I + + G ++EAV L KN+S
Sbjct: 334 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C T S+ +LK + + + A L + + + + N L++ +C+ ++ A
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV-TFNTLINFMCKKGLAEQA 452
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ + ++M GC PD SY ++ GL + EA LL M KG + +IY +
Sbjct: 453 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI----NKGITPNTIIYSS 508
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
+ AL +G+ +Q+ + I +++ + + + C E + A +
Sbjct: 509 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE-TDRAIDFFAYMVSN 567
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
G +P+ ++Y+ + L +EG + E +L E+ ++
Sbjct: 568 GCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 34/262 (12%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y ++ +LC +G I DA+ +L+++ +G A H I C G G +S +
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG----GFRSAVRAL 166
Query: 288 LI---RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ +G + + + + +G + EG ++L ++ + G P +V Y A L L
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
D+ +EE MV+ VRV+ L +M + GC +
Sbjct: 227 KRWDD----VEELMVE-----MVRVHE-----------------ALSQMPEH-GCTPDLR 259
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y ++DG+C+DG A+ +L M P V YN +++GLCS + EA L EM
Sbjct: 260 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319
Query: 465 ISQAKLPDISVWSSLVASVCCN 486
+ D ++ LV C N
Sbjct: 320 FQEDCPLDDVTFNILVDFFCQN 341
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 190/446 (42%), Gaps = 42/446 (9%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ + G +A LF+ + + C ++N L+ + E ++ A LF
Sbjct: 261 IKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLF-DEMAQVG 319
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG----------- 195
+++ + N+L+D + R D A ++EM +G PD +++I+ G
Sbjct: 320 IQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLV 379
Query: 196 ---------------------LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
LC D RL++A LL ++G+ + + L+ A
Sbjct: 380 HDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAI----EQGAPLSVTGFNALIAA 435
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
+G ++A ++ + + GL S + + + CN G E L+ E ++ G
Sbjct: 436 YSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEA--QLLLEHMVSKGYC 493
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S++ + EG V K D+M G P + + A + L + V+EA +
Sbjct: 494 LSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAF 553
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E +G VP YN ++ LC AGN A+ + M +Q G V + T IL+DGLC
Sbjct: 554 AEMTARG-IVPNNFTYNSIISALCRAGNMTEALKLQQNM-RQNGLVPDIYTSNILIDGLC 611
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+G+ +L +M P TYN +I C A+ ++ +M++ PDI
Sbjct: 612 REGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIF 671
Query: 475 VWSSLVASVCCNTADLNVCRKTLEQL 500
++ + S+C N LN K L++L
Sbjct: 672 TYNIWMHSLCSNHM-LNQAGKVLDEL 696
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 189/448 (42%), Gaps = 22/448 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ +L R+ E + + D+M + F I YA+ G++++A + ++ +
Sbjct: 291 TYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREM 350
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V + +FN + K AA ++ +G + + +++L+ LC R
Sbjct: 351 KARGLVPDSCTFNIIAAGAYKFG--HAAQLVHDHDMFGSHMLA--DGMDMLVCRLCWDCR 406
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-GSGEDI 225
D A + + QG ++ L+ + EA L +RI K G
Sbjct: 407 LDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFEL-----YRIMNKLGLAPSS 461
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG----AK 281
+ L+ LC+QG++ +A +LE ++ KG S C D EG A
Sbjct: 462 STFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS------FTICLDASFREGNAVCAL 515
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ G P ++SA L + E + EM +G P+ Y + ++AL
Sbjct: 516 KCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISAL 575
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ G + EAL+ +++ M + VP + NIL+ GLC G + L M G
Sbjct: 576 CRAGNMTEALK-LQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSN-GLTP 633
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY +++ CR A + +ML P + TYN+ + LCS +A L
Sbjct: 634 DTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVL 693
Query: 462 EEMISQAKLPDISVWSSLVASVCCNTAD 489
+E+++ PD +++L+ +C + D
Sbjct: 694 DELVAMGCPPDSVTYNTLMDGICSDVLD 721
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G PSL++ +A+ L+ G + V +EM +G PSL + A + G+V A
Sbjct: 179 GKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVA 238
Query: 351 LEVIEEEMVKGTF--VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
++ + G F VP V YNIL+KG C G S A ++M + GC TY I
Sbjct: 239 SGLLG---IMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRS-GCEPTVVTYNI 294
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
LVD LC +GR EA R+ +EM T+NVLI G G+ +A EM ++
Sbjct: 295 LVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARG 354
Query: 469 KLPDISVWSSLVASV 483
+PD ++ + A
Sbjct: 355 LVPDSCTFNIIAAGA 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 154/415 (37%), Gaps = 106/415 (25%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------------- 209
A +VF+EM +G P +++ ++ G C+ + A+ LL
Sbjct: 203 AWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIK 262
Query: 210 -----------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+ +F + + G +V Y L+ LC +G++ +A ++ +++ + G++A
Sbjct: 263 GHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQA 322
Query: 259 PKSRRHRIDLCPCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
+ I DG G A + E RG +P +++ +A Y G +
Sbjct: 323 -----NTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQ 377
Query: 315 --------GDKVL-DEM-----------RTKGFWP------------SLVMYEAKLAALF 342
G +L D M R W S+ + A +AA
Sbjct: 378 LVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYS 437
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K+G+ +EA E + M K P+ +N L+ GLC+ G A + L+ M + C++
Sbjct: 438 KEGLHEEAFE-LYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST 496
Query: 403 GET---------------------------------YGILVDGLCRDGRFLEASRVLEEM 429
T + ++GLCR EA + EM
Sbjct: 497 SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEM 556
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
R P TYN +I LC G EA+ + M +PDI + L+ +C
Sbjct: 557 TARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLC 611
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 297 ASYSAMAIDLYN---EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
A Y A+ + L+ G E VL +R G PSL A L LF+ G V A V
Sbjct: 147 ARYGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNV 206
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
EE +G P++ +N ++ G C G VA L M + G V N +Y IL+ G
Sbjct: 207 FEEMAARGP-RPSLATFNAMILGFCHRGLVRVASGLLGIMG-EFGIVPNVCSYNILIKGH 264
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
C G +A ++ EEM P V TYN+L+ LC G+ EA +EM
Sbjct: 265 CVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 209/492 (42%), Gaps = 45/492 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L ++ ++ E + V+ +M + + + + I + +AG + +A L
Sbjct: 225 NNWTYTVVINGLVKAGKVAEAERVLQEMPVPTL----ANYTSVIGGHCKAGDMGKAYHLL 280
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+++ + ++NTL+ + +++ A+ L L + I + ++L+ LC+
Sbjct: 281 EDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYEL-LEEMKSNDFVPDIFTYDILIAGLCR 339
Query: 164 CRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+R A + + + C P+ SY+ L+ G R+N+A Y +F + G
Sbjct: 340 AKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDA----YQLFLEMVTAGQH 395
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+V Y TL+ LC+ G+ +A LE+++ K + + C GE ++ A +
Sbjct: 396 PDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE-LDAAST 454
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ + + G P+LA Y+++ L GR+ + + EM +G P V Y + L
Sbjct: 455 VFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLC 514
Query: 343 KDGMVDEALEVIEEEMVKGTFV-------------------------------PTVRVYN 371
+ DEA ++ + +G + PT Y
Sbjct: 515 RWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYA 574
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
+++ LC N A A L+ M G +G T LV +CR + + A LEEM+
Sbjct: 575 TVIESLCKENNLAEARQLLEDMIG-AGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR 633
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK-LPDISVWSSLVASVCCNTADL 490
P V TY+ L+ L GK EA + L +IS PD +W + + N +
Sbjct: 634 LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPD-ELWYVGLIAAYSNQDQV 692
Query: 491 NVCRKTLEQLSS 502
R L++L S
Sbjct: 693 EEARNVLQELKS 704
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 209/489 (42%), Gaps = 26/489 (5%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNR 60
S++W L+ + I+ K+ +A+ F A + ++RH Y L + +
Sbjct: 47 FSMKWNGQLSQRLVGVILHMVKNGESAMVFFGWAGTR-QDFRHTVHTYNCFYEALIRTGQ 105
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
E + + + IR G+L A SL++ + +
Sbjct: 106 CEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKF 165
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRI---QSLNLLMDVLCQCRRSDLALHVFQEM 177
LL + K LE A F E S I + +L+D L + R D A + F+EM
Sbjct: 166 LLNALCKSGNLELALRYF-------EKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEM 218
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
P+ +Y +++ GL ++ EA R+ Q+ + Y +++ C
Sbjct: 219 KHTAI-PNNWTYTVVINGLVKAGKVAEAE--------RVLQEMPVPTLANYTSVIGGHCK 269
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
G + A +LE + RKG + + + C ++I+ A L+ E +P +
Sbjct: 270 AGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRL-QEIDRAYELLEEMKSNDFVPDIF 328
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y + L R+ E +L +R + P++V Y + K V++A ++ E
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGLCR 415
+ G P V Y+ L++GLC+AG ++ A YL++M K++ + Y ++ GLCR
Sbjct: 389 MVTAGQH-PDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKI--LPKVPVYSSVISGLCR 445
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
G AS V + M+ P + YN LI GLC G+ +A + ++EM + PD
Sbjct: 446 AGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVT 505
Query: 476 WSSLVASVC 484
+ +L+ +C
Sbjct: 506 YGTLIVGLC 514
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 194/445 (43%), Gaps = 23/445 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKG-DSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y +I L + R++E ++++ ++ D C + T I +++A ++N+A LF
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ +++TL++ + + AH +L G ++ ++ + ++ LC+
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHS-YLEEMVGKKILPKVPVYSSVISGLCRAG 447
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
D A VF M GC P+ Y+ L+ GLC RL +A + M +++G D
Sbjct: 448 ELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEM----TERGCSPDG 503
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN----DGEDIEGAK 281
V Y TL+ LC + +A + + L +G++ I CN +E A+
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE--------ISETSCNVVIASLRCLEQAQ 555
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ L G P+ Y+ + L E + E ++L++M G P +A + A+
Sbjct: 556 RVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAM 615
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ A+ +EE MV+ P+V Y+ LL L AG + A + L+++ C
Sbjct: 616 CRQDKAVVAMAFLEE-MVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFP 674
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW--PCVETYNVLIRGLCSIGKQYEAVM 459
+ Y L+ + EA VL+E+ +S W + YN L++GL
Sbjct: 675 DELWYVGLIAAYSNQDQVEEARNVLQEL--KSKWGIQSIVAYNTLLKGLFRTRNLQMVYE 732
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L EM + + + ++ L+ C
Sbjct: 733 LLREMKRNEFVVNEATFNILIQGFC 757
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 166/387 (42%), Gaps = 51/387 (13%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
PVY+S+I L + + V D M + C+ +V+ + I + G+L +A K
Sbjct: 434 PVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKE 493
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQC 164
+++ C ++ TL+ + + S+ + A L++RS G E+ S N+ V+
Sbjct: 494 MTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISE--TSCNV---VIASL 548
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR-ISQKGSGE 223
R + A V + + G P Y +++ LC + L EA LL M I GS
Sbjct: 549 RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTV 608
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D L+ A+C Q K AM LE+++R G K
Sbjct: 609 D-----ALVGAMCRQDKAVVAMAFLEEMVRLGSK-------------------------- 637
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALF 342
PS+ +YS + L+ G+ E VL + + +P + Y +AA
Sbjct: 638 ----------PSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYS 687
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
V+EA V++E K + ++ YN LLKGL N + L++M K+ V N
Sbjct: 688 NQDQVEEARNVLQELKSKWG-IQSIVAYNTLLKGLFRTRNLQMVYELLREM-KRNEFVVN 745
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEM 429
T+ IL+ G CR G+ A RVL EM
Sbjct: 746 EATFNILIQGFCRLGQTDRAVRVLSEM 772
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 22/353 (6%)
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-DFQGCYPDR 186
++ LE AH + + S L++ LC+ R D A +F++M GC P+
Sbjct: 34 DASLELAH-----------AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNA 82
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ GLC RL+ A ++ ++ D+V Y TL+ AL G++ +A+
Sbjct: 83 FTYNALVDGLCKQDRLDAAR----AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALA 138
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
++ +G + I C + A + NE + R P+L +YS + L
Sbjct: 139 TFTQMTEEGYVPTLVSFNAIITGLCR-ARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
++ E ++LD M ++G P LV Y + G +D AL ++ MV +P
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR-MVSQGCIPD 256
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y +++ LC G A +++ C N TY L+ G CR R E +V+
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEIFRELVAN-KCSPNVVTYSALIGGYCRASRVDEGGKVM 315
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EM R P V TYN +I GL + + EA EM +PD + L
Sbjct: 316 REMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 149/309 (48%), Gaps = 7/309 (2%)
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEA-THLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
MD +G + + I+++GLC R+ +A H S+ +Q D+V Y TL+ L
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQP----DVVSYTTLINGL 56
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G++ A + K++ G P + + + + ++ A+++I EA R P
Sbjct: 57 CKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPD 116
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +Y+ + L+ GR+ E +M +G+ P+LV + A + L + + +ALEV
Sbjct: 117 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 176
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E M+ F P + Y++++ GLC + A L +M + GC + Y LV G
Sbjct: 177 E-MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE-GCRPDLVAYTPLVLGFSA 234
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
GR A +L M+ + P V TY V+I LC +G+ +A E+++ P++
Sbjct: 235 AGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVT 294
Query: 476 WSSLVASVC 484
+S+L+ C
Sbjct: 295 YSALIGGYC 303
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 155/367 (42%), Gaps = 47/367 (12%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ T I + G+++ A LF+ + + C ++N L+ + K+ +L+AA + +
Sbjct: 49 YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEA 108
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + N LM L Q R D AL F +M +G P S++ ++ GLC RR
Sbjct: 109 -RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR 167
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L +A + M R ++V Y ++ LC ++ +A Q+L++++ +G +
Sbjct: 168 LADALEVFNEMIDRDFHP----NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR---- 219
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P L +Y+ + + GR+ +L
Sbjct: 220 --------------------------------PDLVAYTPLVLGFSAAGRLDSALGLLRR 247
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M ++G P +V Y + L K G VD+A E+ E+V P V Y+ L+ G C A
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF-RELVANKCSPNVVTYSALIGGYCRAS 306
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
V K+ +++ C N TY ++ GL R EA + EM + P TY
Sbjct: 307 R----VDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Query: 442 NVLIRGL 448
L R L
Sbjct: 363 RGLKRAL 369
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL++F E ++ ++ N Y+ +I L +S+++ E ++++D+M + C +
Sbjct: 171 ALEVFNEMIDR--DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 228
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ ++ AG+L+ A+ L + + C+ ++ ++ ++ K +++ AH +F R +
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF-RELVANK 287
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + L+ C+ R D V +EM C P+ +Y+ ++ GL R EA
Sbjct: 288 CSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEA- 343
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
Y MF +S+ G D YR L AL
Sbjct: 344 ---YGMFREMSECGFVPDARTYRGLKRAL 369
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 30/428 (7%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVID-----QMKGDSC-------ECKDS------ 81
+RH Y +MI L ++E K +I + KG + E K +
Sbjct: 14 TFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLY 73
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL--FL 139
VF+ I Y +G L +A+ ++ + W F+T K + KL+ ++ F
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKF--WV-PFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ + N+LM C+ +A VF + G P SY+ LM G
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
L+E L +M G D+ Y L+ LC + KI DA ++ +++L KGL
Sbjct: 191 GDLDEGFRLKSAML----ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPN 246
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ C +G ++ A + + L + P L +Y+ + L +G + + ++
Sbjct: 247 SVTFTTLIDGHCKNGR-VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
DEM KG P + Y + KDG +D A E + + + T + V VY L+ GLC
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDV-VYTALISGLCR 364
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
G S A L++M VG + TY ++++ C+ G + S++L+EM + P V
Sbjct: 365 EGQSVDAEKMLREML-SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 440 TYNVLIRG 447
TYNVL+ G
Sbjct: 424 TYNVLMNG 431
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L++ + I + G + + L+ C G I+ A + + I + GL+ + +
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLM 184
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
G+ EG + + A++ G+ P + +YS + L E +I + +++ DEM KG
Sbjct: 185 NGYIRLGDLDEGFR--LKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 242
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P+ V + + K+G VD A+E I ++M+ + P + YN L+ GLC G+ A
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAME-IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +MS + G + TY L+DG C+DG A + M+ + Y LI
Sbjct: 302 HHLIDEMSMK-GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALIS 360
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC G+ +A L EM+S PD ++ ++ C
Sbjct: 361 GLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFC 398
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 151/371 (40%), Gaps = 66/371 (17%)
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-----------------DIVIYR 229
SY ++ LC + L+EA L+ + +S+KG G D+ ++
Sbjct: 20 HSYCTMIHFLCTHQMLSEAKSLIQVV---VSRKGKGSASAVFAAIFETKGTQRSDLYVFS 76
Query: 230 TLLFALCDQGKIQDAMQ-----------------------------------ILEKILRK 254
L+ A + G ++DA++ E+IL
Sbjct: 77 GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 136
Query: 255 GLKAP----KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG 310
G A HR C DG DI A+S+ + G PS+ SY+ + G
Sbjct: 137 GYPASLYFFNILMHRF----CKDG-DIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 311 RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY 370
+ EG ++ M G P + Y + L K+ +D+A E+ +E +VKG VP +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG-LVPNSVTF 250
Query: 371 NILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
L+ G C G +A+ K+M Q + TY L+ GLC+ G +A +++EM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADL 490
++ P TY LI G C G A + MI + D V+++L++ +C +
Sbjct: 310 MKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSV 369
Query: 491 NVCRKTLEQLS 501
+ + E LS
Sbjct: 370 DAEKMLREMLS 380
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 186/438 (42%), Gaps = 41/438 (9%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S F I+ Y + ++ + V + + + + ++ + LL + + K LF
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF-D 214
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ VK +++ LC+ + + A + + + GC +Y++ + GLC +
Sbjct: 215 TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSK 274
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R+ EA + S+ +KG D+V Y TL+ LC + + M+++++++ G +
Sbjct: 275 RVWEAVEVKRSL----GEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSE 330
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + G IEGA L+N+ G +P+L Y++M L G++ E + +
Sbjct: 331 AAVSGLIEGLIKMG-SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----------------------------- 351
M +G P+ V Y + + +D A
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFG 449
Query: 352 -----EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E++ +EMV PTV Y L+ G C G A +M+ + G N T+
Sbjct: 450 KMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGK-GIAPNTVTF 508
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GLC+ + EAS++ +EM+ P TYNVLI G C G A L+EMI
Sbjct: 509 TALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIK 568
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD + L+A +C
Sbjct: 569 KGLSPDTYTYRPLIAGLC 586
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 195/439 (44%), Gaps = 10/439 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y SMI + ++ + + +M + + + + I Y + G + +A L+ ++
Sbjct: 438 YNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMT 497
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
T +F L+ + + +K+ A LF ++ + N+L++ C+ +
Sbjct: 498 GKGIAPNTVTFTALICGLCQINKMAEASKLF-DEMVELKILPNEVTYNVLIEGHCREGNT 556
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM +G PD +Y L+ GLC+ R++EA + + K D +
Sbjct: 557 TRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL----HHKHQRLDELC 612
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y LL C +G+I++A+ ++++ +GL+ + N + I L+ E
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFELLREM 670
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+G P Y+ + G + + + M +G+ P+ V Y A + LFK G V
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+EA +++ + M+ G +P Y L L GN A+ M + G AN TY
Sbjct: 731 NEA-KLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ--GSFANTVTYN 787
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+ G C+ G+F EA+++L+ M+ P TY+ I C G A+ E M+ +
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847
Query: 468 AKLPDISVWSSLVASVCCN 486
PD V++ L+ + C N
Sbjct: 848 GLKPDRVVFNFLIHACCLN 866
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 190/438 (43%), Gaps = 43/438 (9%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++ L E + KE+I+Q +G+ C + I ++ ++ EAV + ++L
Sbjct: 227 IYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL 286
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
E L+A + + G LC+ +
Sbjct: 287 G--------------------EKGLKADLVTYCTLVLG----------------LCRIQE 310
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ + + EM G P + L++GL + A LL ++ + G ++
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLN----KVGKLGVVPNLF 366
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+Y +++ +LC GK+++A + + +GL P + I + ++ A N+
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLN-PNDVTYTILIDGFGRRAKLDVAFYYFNK 425
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G ++ SY++M G++ + + EM KG P++ Y + ++ KDG+
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V +A ++ E KG P + L+ GLC A A +M ++ + N TY
Sbjct: 486 VPKAFKLYHEMTGKG-IAPNTVTFTALICGLCQINKMAEASKLFDEMV-ELKILPNEVTY 543
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L++G CR+G A +L+EM+ + P TY LI GLCS G+ EA ++ ++
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603
Query: 467 QAKLPDISVWSSLVASVC 484
+ + D +++L+ C
Sbjct: 604 KHQRLDELCYTALLQGFC 621
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 36/251 (14%)
Query: 48 YASMI-GILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
YA +I G L++++RI + E++ +M G + + ++ I + ++G L +A + +
Sbjct: 648 YAVLISGALNQNDRI--LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIM 705
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
V + ++ L+ + K + A +LF R G + + I + +D L +
Sbjct: 706 IGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI-TYGCFLDHLTKEGN 764
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--------------YSM 212
+ AL + M QG + + +Y+IL++G C + EA LL YS
Sbjct: 765 MENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST 823
Query: 213 F----------------WR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
F W + Q+G D V++ L+ A C G++ A+Q+ ++ +G
Sbjct: 824 FIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883
Query: 256 LKAPKSRRHRI 266
LK +S H +
Sbjct: 884 LKPTQSTYHSL 894
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 211/485 (43%), Gaps = 42/485 (8%)
Query: 33 EAKEKY------PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
EA EK+ N+ HN +Y+S+I ++ + + ++ M+ E ++
Sbjct: 210 EAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNIL 269
Query: 87 IRTYARAGQLNEAVSLFKNLS------------QFNC-VNWTQSFNTLLKEMVKESKLEA 133
+ YAR + +++F L + C +N ++K + +++A
Sbjct: 270 MDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKA 329
Query: 134 AHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILM 193
I R+ Y ++L+D Q A VF++M G PD +Y+IL+
Sbjct: 330 QGITLNRNTY-----------SMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILL 378
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
K C R++ A LL R+ +G I Y T++ G ++ A + + ++
Sbjct: 379 KAFCKSRQMTRAIQLL----GRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKL 434
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
G + P + + + + I+ A S+I+E + G P+ SY+ + + G I
Sbjct: 435 AGCR-PNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIG 493
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR-VYNI 372
K L + P ++ Y + L A K G + A+ V EE G VP ++N
Sbjct: 494 LAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAG--VPMNNYIFNT 551
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
LL G G+ A ++KM +Q G + +Y V+ C+ G +A+ +EEM +
Sbjct: 552 LLDGWAQRGDMWEAYGIMQKM-RQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQ 610
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNV 492
P ++TY +LI G S+ +A++ +EM + +PD ++ +V S+ A +
Sbjct: 611 DLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLSKAA---I 667
Query: 493 CRKTL 497
R+T+
Sbjct: 668 ARETV 672
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 185/461 (40%), Gaps = 49/461 (10%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I S + ++ + ++ +++++ I Y +AG + A +L
Sbjct: 192 NAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALV 251
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVK---ESK-LEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
++ + +N L+ + E++ L H L R G + + L++
Sbjct: 252 ADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTG--LSPTAVTYGCLIN 309
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+ + + AL +EM QG +R +Y +L+ G A +S+F +S+
Sbjct: 310 LYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANA----FSVFEDMSEA 365
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D V Y LL A C ++ A+Q+L ++
Sbjct: 366 GIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMK--------------------------- 398
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
RG P++ +Y + G + K + EM+ G P+ Y +
Sbjct: 399 ---------TRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMH 449
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L + G +D A VI+E + G P R Y L++G G +A LK+++ ++
Sbjct: 450 NLVQLGQIDRAASVIDEMELAGV-QPNFRSYTTLMQGFASIGEIGLAFKCLKRVN-EITQ 507
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+Y L+ C+ GR A V EEM +N L+ G G +EA
Sbjct: 508 KPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYG 567
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+++M + PDI ++S V + CC D+ +T+E++
Sbjct: 568 IMQKMRQEGFTPDIHSYTSFV-NACCKAGDMQKATETIEEM 607
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 39/264 (14%)
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
++++GA S + E I G P+ A++SA+ + G + +K ++ + ++ +
Sbjct: 171 AQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAI 230
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--------------- 378
Y + + A K G ++ A E + +M + T+ +YNIL+ G
Sbjct: 231 YSSIIHAYCKAGNMERA-EALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKL 289
Query: 379 ----DAGNSAVAVMY---------LKKMSKQV---------GCVANGETYGILVDGLCRD 416
D G S AV Y L KM K + G N TY +LVDG +
Sbjct: 290 KARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQL 349
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G F A V E+M P TYN+L++ C + A+ L M ++ P I +
Sbjct: 350 GDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTY 409
Query: 477 SSLVASVCCNTADLNVCRKTLEQL 500
+++ T D+ + KT+ ++
Sbjct: 410 ITIIDGF-MKTGDVRMAYKTVSEM 432
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
R Y +L+ G+ A + +KM + G ++ Y L+ A +E
Sbjct: 124 RDYALLIHYYGKRGDKRGARVTFEKM-RAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVE 182
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EM I +P T++ +I G S G A W + +S+ +++++SS++ + C
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYC 239
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 200/491 (40%), Gaps = 58/491 (11%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + + K ++AL + ++ E + N +Y++++ L + + +
Sbjct: 43 PDAVTYGTIVNGMCKLGDTVSALNMLRKMDES--QIKANVVIYSAIVDRLCKDGNHIKAQ 100
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M + I Y G+ ++A L +++ + N +F+ L+
Sbjct: 101 NIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAF 160
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE K+ A L+ R + + + ++D C+ R + A H+F M +GC PD
Sbjct: 161 VKEGKVSGAEELY-REMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219
Query: 186 RESYHILMKGLCNDRRLNEATHLLYS------------MFWRISQKGSGEDIVIYRTLLF 233
+ + L+ G C +R HL++ +F + G DIV TLL
Sbjct: 220 IITLNTLIDGCCRAKR-----HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLA 274
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC+ GK++ A+++ K+ +K + +D CN +I + +G
Sbjct: 275 GLCENGKLEKALEMF-KVFQK-------SKMDLDTATCN----------IIINGMCKG-- 314
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
+ A DL+N + G +V Y + K+G A ++
Sbjct: 315 ----NKVDEAWDLFNS------------LPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
E + KG +P+ YN ++ G C A + M + GC + T+ L+ G
Sbjct: 359 YLEMLCKG-IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSE-GCSPDVVTFSTLIKGY 416
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ GR + + EM R TYN LI G C +G A EEM+S PD
Sbjct: 417 CKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDT 476
Query: 474 SVWSSLVASVC 484
+ S++A +C
Sbjct: 477 ITFRSMLAGLC 487
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 185/422 (43%), Gaps = 21/422 (4%)
Query: 75 SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA 134
C F T + R G++ +A++L + + ++ T++ M K +A
Sbjct: 5 GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64
Query: 135 HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+ LR ++K+ + + ++D LC+ A ++F EM +G +P+ +Y+ ++
Sbjct: 65 -LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C+ + ++A LL M R D+V + L+ A +GK+ A ++ ++LR+
Sbjct: 124 GYCSYGKWSDAEQLLRDMIER----NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID--------- 305
+ P + + + +E AK + + + +G P + + + + ID
Sbjct: 180 NI-FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTL-IDGCCRAKRHL 237
Query: 306 ---LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
G + + EM + G P +V LA L ++G +++ALE+ + K
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV-FQKSK 296
Query: 363 FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEA 422
NI++ G+C GN L G + TY IL+ ++G FL A
Sbjct: 297 MDLDTATCNIIINGMC-KGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355
Query: 423 SRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+ EML + P TYN ++ G C + EA ++ M+S+ PD+ +S+L+
Sbjct: 356 EDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415
Query: 483 VC 484
C
Sbjct: 416 YC 417
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 174/425 (40%), Gaps = 57/425 (13%)
Query: 20 KQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
K + + A IF E EK +PN Y MI + ++ ++++ M + +
Sbjct: 92 KDGNHIKAQNIFTEMHEKGIFPNVL----TYNCMIDGYCSYGKWSDAEQLLRDMIERNID 147
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHI 136
F+ I + + G+++ A L++ + + N T ++++++ K S+LE A H+
Sbjct: 148 PDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHM 207
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-----------DLALHVFQEMDFQGCYPD 185
L G I +LN L+D C+ +R ++A +FQEM G PD
Sbjct: 208 FDLMVSKGC--SPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265
Query: 186 RESYHILMKGLCNDRRLNEATHLL-------------------------------YSMFW 214
+ + L+ GLC + +L +A + + +F
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN 325
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL-KAPKSRRHRID-LCPCN 272
+ G D+V Y L+ +G A I ++L KG+ + + +D C N
Sbjct: 326 SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN 385
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+E A+ +++ + G P + ++S + GR+ +G ++ EM +G +
Sbjct: 386 R---LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI 442
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y A + K G ++ A ++ EE MV P + +L GLC + L+
Sbjct: 443 TYNALIHGFCKVGDLNGAQDIFEE-MVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLED 501
Query: 393 MSKQV 397
+ K V
Sbjct: 502 LQKSV 506
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 18/282 (6%)
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G ++V + TL+ LC +G++ A+ ++++++ +G + I C G+ +
Sbjct: 3 ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62
Query: 278 EGAKSL--INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
L ++E+ I+ + YSA+ L +G ++ + EM KG +P+++ Y
Sbjct: 63 SALNMLRKMDESQIKANV---VIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ G +A +++ +M++ P V ++ L+ G + A ++M +
Sbjct: 120 CMIDGYCSYGKWSDAEQLL-RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV-----------L 444
+ TY ++DG C+ R +A + + M+ + P + T N L
Sbjct: 179 R-NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
I G C +G A +EMIS PDI ++L+A +C N
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 212/476 (44%), Gaps = 15/476 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K A+K+ E + K N Y +I + +R+ + +
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK--GCTPNIVTYNVIINGMCREDRVDDAR 227
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++++++ + + T ++ A + + LF + + NCV +F+ L++
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287
Query: 126 VKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ +E A +L S +G + + N++++ +C+ R D A M GC P
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTL--CNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D SY ++KGLC R +A LL M +K + V + T + LC +G I A
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMV----RKNCPPNEVTFNTFICILCQKGLIDQA 401
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+ ++E++ G + + C G ++ A L N P+ +Y+ +
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGR-VDSALELFNSLPCE---PNTITYTTLLT 457
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + R+ ++L EM ++V + ++ + G V+EA+E++++ M G
Sbjct: 458 GLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGC-T 516
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + +N LL G+ + NS A+ L + + G + TY +VD L R+ R EA +
Sbjct: 517 PNLITFNTLLDGITEDCNSEEALELLHGLVSK-GISLDTITYSSIVDVLSREDRIEEAVQ 575
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ + P YN ++ LC + A+ + M+S + +P+ S + L+
Sbjct: 576 MFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILI 631
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 185/410 (45%), Gaps = 13/410 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ IR G++ +A+SL ++ + C ++ LL+ + K S A + L
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA-MKVLDE 197
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
I + N++++ +C+ R D A + + G PD SY ++KGLC +R
Sbjct: 198 MRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKR 257
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ L F + + + V + L+ C G ++ A+++L+++ G A +
Sbjct: 258 WEDVEVL----FCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTT 313
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C G ++ A +N G P SY+ + L GR + ++L+E
Sbjct: 314 LCNIVINSICKQGR-VDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K P+ V + + L + G++D+A+ +IE+ G V V YN L+ G C G
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIV-TYNALVNGFCVQG 431
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ ++ + C N TY L+ GLC R A+ +L EM+ V T+
Sbjct: 432 RVDSAL----ELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTF 487
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC--CNTAD 489
NVL+ C G EA+ +++M+ P++ +++L+ + CN+ +
Sbjct: 488 NVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 166/363 (45%), Gaps = 11/363 (3%)
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L+ ++ L A L RS E L+ + LC+ R+ A V + + G
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRN-LCRRGRTSDAARVLRTAEGSG 100
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D +Y+ L+ G C RL+ A L+ SM D Y L+ LCD+G++
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRLIASM-------PVPPDAYTYTPLIRGLCDRGRV 153
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA+ +L+ +LR+ + P + + L A +++E +G P++ +Y+
Sbjct: 154 GDALSLLDDMLRRECQ-PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNV 212
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + E R+ + ++L+ + + GF P V Y L L E +EV+ EMV+
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW-EDVEVLFCEMVEN 271
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
VP +++L++ C G A+ L +MS+ GC AN I+++ +C+ GR +
Sbjct: 272 NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEH-GCTANTTLCNIVINSICKQGRVDD 330
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
A L M P +Y +++GLC G+ +A L EM+ + P+ +++ +
Sbjct: 331 AFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390
Query: 482 SVC 484
+C
Sbjct: 391 ILC 393
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 191/438 (43%), Gaps = 19/438 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ + ++D M C+ + + ++ +A+ + +
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++N ++ M +E +++ A IL S YG++ + S ++ LC +
Sbjct: 199 RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDT--VSYTTVLKGLCAAK 256
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + +F EM C P+ ++ +L++ C + A +L R+S+ G +
Sbjct: 257 RWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVL----DRMSEHGCTANT 312
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKS 282
+ ++ ++C QG++ DA + L + G +P + + LC ED AK
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGC-SPDTISYTTVLKGLCRAGRWED---AKE 368
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+NE + + P+ +++ L +G I + ++++M G +V Y A +
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
G VD ALE+ + P Y LL GLC A A L +M Q C N
Sbjct: 429 VQGRVDSALELFNSLPCE----PNTITYTTLLTGLCHAERLDAAAELLAEM-MQNDCPLN 483
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ +LV C+ G EA ++++M+ P + T+N L+ G+ EA+ L
Sbjct: 484 VVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH 543
Query: 463 EMISQAKLPDISVWSSLV 480
++S+ D +SS+V
Sbjct: 544 GLVSKGISLDTITYSSIV 561
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 166/371 (44%), Gaps = 19/371 (5%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV+D+M C ++ I + + G++++A N+ + C T S+ T+LK +
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357
Query: 126 VKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ + E A L ++C EV + N + +LCQ D A+ + ++M G
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEV-----TFNTFICILCQKGLIDQAILLIEQMPEYG 412
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C +Y+ L+ G C R++ A L S+ + + Y TLL LC ++
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE-------PNTITYTTLLTGLCHAERL 465
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A ++L ++++ + + C G +E A L+ + + G P+L +++
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF-VEEAIELVQQMMEHGCTPNLITFNT 524
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + + E ++L + +KG + Y + + L ++ ++EA+++ G
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P +YN +L LC + A+ + M C+ N TY IL++GL R+G E
Sbjct: 585 -MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSN-SCMPNESTYVILIEGLAREGLLKE 642
Query: 422 ASRVLEEMLIR 432
A VL E+ R
Sbjct: 643 ARYVLSELCSR 653
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 34/206 (16%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ L + R+ E++ +M + C F + + + G + EA+ L
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVK----ESKLEAAH------------------------ 135
+ + + C +FNTLL + + E LE H
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRE 567
Query: 136 ------ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+ + ++ + N ++ LC+ +D A+ F M C P+ +Y
Sbjct: 568 DRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTY 627
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWR 215
IL++GL + L EA ++L + R
Sbjct: 628 VILIEGLAREGLLKEARYVLSELCSR 653
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 156/347 (44%), Gaps = 12/347 (3%)
Query: 146 EVKSRIQSLN-----LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
E++SR L L+D L R D AL VF+ + C ++H L+ +
Sbjct: 80 ELRSRRAPLRGTVFAALIDRLGAAARPDAALLVFRAVP-AFCSHSNATFHALLHCFVCNG 138
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
RL+ A LL R ++ G + V Y +L C++ A +L+++L +G++
Sbjct: 139 RLDAARDLL----PRAAKLGVRPNAVSYNIILKGACERDGFVGARVVLDEMLGRGVRPTV 194
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + C +GE + GA+ L E + RG P+ +YS + L + GR + K++
Sbjct: 195 VTFNTLVGAACQEGE-LGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDAKKMMF 253
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+M +G V Y ++A + G +D + + M K P YN+L+K LCD
Sbjct: 254 DMEYQGCQTEAVNYGVLMSAYARQGNID-GVRGLLSNMRKRKLKPDDASYNVLIKCLCDN 312
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A L +M + G V + TY +L DG C F RVL ML + P T
Sbjct: 313 GRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVLNAMLASGHCPLAHT 372
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
+ L++GL K EA LE+M D W SLV VC +
Sbjct: 373 FRHLVKGLSEDEKTEEACFVLEKMAESGAWMDAEGWQSLVTCVCSGS 419
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 8/337 (2%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
L + E + + R G V+A++I L + R V + C ++ F +
Sbjct: 75 LPLISELRSRRAPLR--GTVFAALIDRLGAAARPDAALLVFRAVPA-FCSHSNATFHALL 131
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ G+L+ A L ++ S+N +LK + A ++ L G V
Sbjct: 132 HCFVCNGRLDAARDLLPRAAKLGVRPNAVSYNIILKGACERDGFVGARVV-LDEMLGRGV 190
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
+ + + N L+ CQ A + +EM +G P+ +Y +LM+GLC+ R ++A
Sbjct: 191 RPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDAKK 250
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
+++ M + +G + V Y L+ A QG I +L + ++ LK + + +
Sbjct: 251 MMFDMEY----QGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASYNVLI 306
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
C C++G +E K+L+ + G +PS A+Y +A + G +VL+ M G
Sbjct: 307 KCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVLNAMLASGH 366
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
P + + L +D +EA V+E+ G ++
Sbjct: 367 CPLAHTFRHLVKGLSEDEKTEEACFVLEKMAESGAWM 403
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y+ ++ L ++ R + K+++ M+ C+ + + + YAR G ++ L
Sbjct: 228 NAVTYSLLMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLL 287
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
N+ + S+N L+K + ++ AH + + +L D C
Sbjct: 288 SNMRKRKLKPDDASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCS 347
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ L L V M G P ++ L+KGL D + EA +L M ++ G+
Sbjct: 348 AQDFGLGLRVLNAMLASGHCPLAHTFRHLVKGLSEDEKTEEACFVLEKM----AESGAWM 403
Query: 224 DIVIYRTLLFALCDQGKIQ 242
D +++L+ +C +++
Sbjct: 404 DAEGWQSLVTCVCSGSEVK 422
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/562 (21%), Positives = 221/562 (39%), Gaps = 102/562 (18%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
++ P AL+ F+ A K P H M+ ++ R+ +M EV D M+ +
Sbjct: 99 LRSADGPAEALERFRSAARK-PRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVK 157
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES----KLEA 133
FA G L A + + V ++N L+ +VK LE
Sbjct: 158 ANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEV 217
Query: 134 AHIL------------------------------FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ LR VK + S + + VL Q
Sbjct: 218 YRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQ 277
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------- 212
+R D A + +M+ +GC PD ++ +L++ LC+ R+++A + + M
Sbjct: 278 AKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVT 337
Query: 213 -------------------FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
W + G +++V Y ++ ALC G++ +A+++ +++
Sbjct: 338 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 397
Query: 253 RKGL--------------------------------KAPKSRRHRIDLCPCNDGEDIEGA 280
+KG+ PK + L G+ E
Sbjct: 398 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 457
Query: 281 KSLINEALIR--GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
K++ L++ G +P + + +A+ L GR+ +V E++ G P + Y +
Sbjct: 458 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 517
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K DEA+++ + M++ VP V N L+ L AG A ++ K++
Sbjct: 518 KCCSKASKFDEAVKIFYD-MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL-KEMN 575
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
TY L+ GL R+G+ E +LEEM +Y P + TYN ++ LC G +A+
Sbjct: 576 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDAL 635
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
L M ++ +PD+S +++++
Sbjct: 636 DMLYSMTTKGCIPDLSSYNTVI 657
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 49/472 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S++++ E ++ M ++C + I T +AG+ +EA +F L
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 571
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ N ++NTLL + +E K+ E H+L Y + + N ++D LC+
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL--EEMYHSNYPPNLITYNTILDCLCKNG 629
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ AL + M +GC PD SY+ ++ GL + R NEA +S+F ++ +K D
Sbjct: 630 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA----FSIFCQM-KKVLIPDY 684
Query: 226 VIYRTLLFALCDQGKIQDAMQILEK-ILRKGLKAPKSRRHRI------------------ 266
T+L + G +++A+ I++ L+ G K +S H +
Sbjct: 685 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAE 744
Query: 267 ------------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
LCP C + +E A L+ + G Y+++ L +E
Sbjct: 745 IIASSGITLDDFFLCPLIKHLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDE 803
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I + + EM+ G P Y L A+ K ++E L+V +EEM + + T
Sbjct: 804 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV-QEEMHRKGYESTYVT 862
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y MS+ G TYG L+DGL + GR +A + E
Sbjct: 863 YNTIISGLVKSRRLEQAIDLYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
ML YN+L+ G G + ++M+ Q PDI ++ ++
Sbjct: 921 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 193/444 (43%), Gaps = 18/444 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +L L + K A +IF + KE N Y +++ L ++ E+
Sbjct: 543 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM--NLEPTDGTYNTLLAGLGREGKVKEVM 600
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++++M + + T + + G +N+A+ + +++ C+ S+NT++ +
Sbjct: 601 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALHVFQEMDFQ-G 181
VKE + A +F + K I L +L + L ALH+ ++ Q G
Sbjct: 661 VKEERYNEAFSIFCQM-----KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 715
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
DR S H LM+G+ + ++ I+ G D L+ LC Q K
Sbjct: 716 SKTDRSSCHSLMEGILKKAGIEKSIEFAEI----IASSGITLDDFFLCPLIKHLCKQKKA 771
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++++K G+ K+ + +C D I+ A+ L E G P +Y+
Sbjct: 772 LEAHELVKKFKSFGVSL-KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 830
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + RI E KV +EM KG+ + V Y ++ L K +++A+++ M +G
Sbjct: 831 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 890
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F PT Y LL GL AG A +M + GC AN Y IL++G G +
Sbjct: 891 -FSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-EYGCKANCTIYNILLNGHRIAGNTEK 948
Query: 422 ASRVLEEMLIRSYWPCVETYNVLI 445
+ ++M+ + P +++Y ++I
Sbjct: 949 VCHLFQDMVDQGINPDIKSYTIII 972
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 187/400 (46%), Gaps = 20/400 (5%)
Query: 10 TPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
TP ++ ++K+ P AL+ F + Y H+ + I I + + + +
Sbjct: 53 TPNLVNSVLKRLWNHGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSL 111
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I +M+ FA YA +G+ ++AV LF N+ + C SFNT+L + K
Sbjct: 112 IHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 171
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++E A+ LF R+ G + + N++++ C +R+ AL V +EM +G P+
Sbjct: 172 SKRVEKAYELF-RALRG-RFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLT 229
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ +++G ++ +A + F + ++ D+V Y T++ G+I+ +
Sbjct: 230 TYNTMLQGFFRAGQIRQA----WEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNV 285
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++R+G+ + + C + +E A + E + +G P++ +Y+ + L+
Sbjct: 286 FDEMIREGVLPSVATYNAFIQVLCKK-DSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLF 344
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ G+ G++++ M +G P+ Y + + V++AL + E+M G +P +
Sbjct: 345 HAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF-EKMGTGDCLPNL 403
Query: 368 RVYNILLKG---------LCDAGNSAVAVMYLKKMSKQVG 398
YNIL+ G + AGN A A L+ SK G
Sbjct: 404 DTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGG 443
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D A+ +F M GC+ D S++ ++ LC +R+ +A L ++ R S D
Sbjct: 139 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSA-----DT 193
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y ++ C + A+++L++++ +G+
Sbjct: 194 VTYNVIVNGWCLIKRTPKALEVLKEMVDRGIN---------------------------- 225
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P+L +Y+ M + G+I + + EM+ + +V Y + G
Sbjct: 226 --------PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAG 277
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ V +E M++ +P+V YN ++ LC + AV+ ++M ++ G N T
Sbjct: 278 EIKRTRNVFDE-MIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRK-GYEPNVTT 335
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y +L+ GL G+F +++ M P +TYN++IR + +A+ E+M
Sbjct: 336 YNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 395
Query: 466 SQAKLPDISVWSSLVASV 483
+ LP++ ++ L++ +
Sbjct: 396 TGDCLPNLDTYNILISGM 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +++ +A + G+ + K+ M G + L + L L K V++A E+
Sbjct: 122 PSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 181
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++G F YN+++ G C + A+ LK+M + G N TY ++ G
Sbjct: 182 FRA--LRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDR-GINPNLTTYNTMLQGF 238
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G+ +A EM R+ V TY ++ G G+ +EMI + LP +
Sbjct: 239 FRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSV 298
Query: 474 SVWSSLVASVC 484
+ +++ + +C
Sbjct: 299 ATYNAFIQVLC 309
>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 376
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 160/335 (47%), Gaps = 13/335 (3%)
Query: 139 LRSCYG-WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
++ C+ WE+ R + S N++M L + D + +++ M G D +Y IL
Sbjct: 41 IKDCFKLWELMGREGSRSVSSFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGIL 100
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C + LN++ H+L +KG D Y ++ LC + K+ A+ +L ++
Sbjct: 101 VHGFCKNGYLNKSLHVLEIA----ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMI 156
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ G K P + + + E A ++ E P++ +YS + L R
Sbjct: 157 KSGCK-PNAHVYNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERF 215
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++ EM KG PS++ Y + L D V++A ++ + + KG F P V+++NI
Sbjct: 216 GEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKG-FKPDVQMHNI 274
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
++ GLC G +A+ M++ C N T+ L++G +DG F A + ++
Sbjct: 275 MIHGLCSVGKMQLALSLYFNMNRW-DCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRN 333
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
P + +YN+ ++GLCS + A+++L + + +
Sbjct: 334 GLQPDIISYNITLKGLCSCNRISGAILFLHDAVCK 368
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 8/297 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D A V++E+ PD Y+ ++ G RR+ + L W + +
Sbjct: 1 CEIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKL-----WELMGREG 55
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + ++ L D K+ + + I E + G + C +G + +
Sbjct: 56 SRSVSSFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGY-LNKSL 114
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ A +GG+ +YSAM L E ++ + VL+ M G P+ +Y A + L
Sbjct: 115 HVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++A+ V+ E M F PTV Y+ L+ GLC A +K+M + G
Sbjct: 175 VGASKFEDAIRVLRE-MGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDK-GLNP 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ TY +L+ GLC D + +A ++ +++ + + P V+ +N++I GLCS+GK A+
Sbjct: 233 SVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLAL 289
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + R G S++S++ M L++ ++ E + + M+ G+ + Y + K+G
Sbjct: 49 ELMGREGSRSVSSFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNG 108
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
++++L V+E KG + Y+ ++ GLC AV L M K GC N
Sbjct: 109 YLNKSLHVLEIAERKGGVLDAF-AYSAMINGLCKEAKLDKAVSVLNGMIKS-GCKPNAHV 166
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L++GL +F +A RVL EM + P V TY+ LI GLC + EA ++EM+
Sbjct: 167 YNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEML 226
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P + +S L+ +C
Sbjct: 227 DKGLNPSVITYSLLIKGLC 245
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 144/343 (41%), Gaps = 56/343 (16%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
L ++ ++ E+ + + MK +S +DS+ + + + + G LN+++ + + + V
Sbjct: 69 LFDNAKVDEVISIWELMK-ESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIAERKGGVL 127
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+++ ++ + KE+KL+ A + L K N L++ L + + A+ V
Sbjct: 128 DAFAYSAMINGLCKEAKLDKA-VSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAIRV 186
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+EM P +Y L+ GLC R EA L+ M KG ++ Y L+
Sbjct: 187 LREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEML----DKGLNPSVITYSLLIK 242
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC K++ A Q+ +++ KG K P + H I +I G
Sbjct: 243 GLCLDCKVEKAFQLWNQVISKGFK-PDVQMHNI---------------------MIHG-- 278
Query: 294 PSLASYSAMAIDL---YNEGRIVEGDKVLDEMRTKGFW---PSLVMYEAKLAALFKDGMV 347
L S M + L +N R W P+LV + + +KDG
Sbjct: 279 --LCSVGKMQLALSLYFNMNR----------------WDCAPNLVTHNTLMEGFYKDGDF 320
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
AL VI +++ P + YNI LKGLC + A+++L
Sbjct: 321 RNAL-VIWARIMRNGLQPDIISYNITLKGLCSCNRISGAILFL 362
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 7/209 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N VY ++I L +++ + V+ +M ++T I + + EA
Sbjct: 161 KPNAHVYNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYD 220
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L K + +++ L+K + + K+E A L+ K +Q N+++ L
Sbjct: 221 LVKEMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLW-NQVISKGFKPDVQMHNIMIHGL 279
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKG 220
C + LAL ++ M+ C P+ +++ LM+G D A + W RI + G
Sbjct: 280 CSVGKMQLALSLYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNAL-----VIWARIMRNG 334
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILE 249
DI+ Y L LC +I A+ L
Sbjct: 335 LQPDIISYNITLKGLCSCNRISGAILFLH 363
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 189/406 (46%), Gaps = 52/406 (12%)
Query: 85 TAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQS-FNTLLKEMVKESKLEAAHILFLRSC 142
+ +R A+ G +++A++ FK+L +QF ++ + +N LL+ ++ + L+
Sbjct: 83 SMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLY-SDM 141
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
V + + NLL+ LC+ R D AL +F++M +GC P+ + IL++GLC +
Sbjct: 142 LAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLV 201
Query: 203 NEATHLLYSM-FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A L+ + RI+ + V+Y TL+ C + +A +++E++
Sbjct: 202 KQALELVNNNNSCRIANR------VVYNTLVSRFCREEMNNEAERLVERM---------- 245
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
NE G +P + ++++ L G+++E ++ +
Sbjct: 246 -----------------------NEL---GVLPDVVTFNSRISALCRAGKVMEASRIFRD 279
Query: 322 MRTKGFW----PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
M+ P++V + L K GM+ +A ++E G F ++ YNI L GL
Sbjct: 280 MQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF-DSLECYNIWLMGL 338
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
G A + L +M + G N TY I++DGLCR+ +A +++ M+ +P
Sbjct: 339 LRNGELLEARLVLDEMVAK-GIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPD 397
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
Y+ L+ G CS GK +EA L EMI P+ ++L+ S+
Sbjct: 398 TVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSL 443
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 198/464 (42%), Gaps = 37/464 (7%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
+I L ES ++ ++M C + +R RAG + +A+ L N +
Sbjct: 156 LIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCR 215
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
N +NTL+ +E A L R V + + N + LC+ + A
Sbjct: 216 IANRV-VYNTLVSRFCREEMNNEAERLVER-MNELGVLPDVVTFNSRISALCRAGKVMEA 273
Query: 171 LHVFQEMDFQG----CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+F++M P+ ++++++KG C + +A L+ +M + G+ + +
Sbjct: 274 SRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETM----KKVGNFDSLE 329
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L L G++ +A +L++++ KG++ P + + I + + A+ L++
Sbjct: 330 CYNIWLMGLLRNGELLEARLVLDEMVAKGIE-PNAYTYNIMMDGLCRNHMLSDARGLMDL 388
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+ G P +YS + + G++ E VL EM G P+ L +L+K+G
Sbjct: 389 MMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGR 448
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----------------------DAGNS 383
EA E++++ M + + P NI++ GLC D GNS
Sbjct: 449 TLEAEEMLQK-MNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNS 507
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
++ + + C+ +G TY L++GLC+ GR EA + EML ++ P TY+
Sbjct: 508 FASL--INSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDT 565
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
I C GK A L++M + +++L+ + N
Sbjct: 566 FIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNN 609
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 202/476 (42%), Gaps = 56/476 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY +++ E + ++++M F + I RAG++ EA +F
Sbjct: 218 NRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIF 277
Query: 104 KN--------LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQS 153
++ L + N V +FN +LK K + A L ++ ++ ++
Sbjct: 278 RDMQMDAELGLPRPNVV----TFNLMLKGFCKHGMMGDARGLVETMKKVGNFD---SLEC 330
Query: 154 LNL-LMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
N+ LM +L R +L A V EM +G P+ +Y+I+M GLC + L++A L+
Sbjct: 331 YNIWLMGLL---RNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMD 387
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + G D V Y TLL C +GK+ +A +L +++R G + + +
Sbjct: 388 LMM----RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSL 443
Query: 271 CNDGEDIEGAKSL--INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-- 326
+G +E + L +NE + P + + + L G + + +++ EM T G
Sbjct: 444 WKEGRTLEAEEMLQKMNEKCYQ---PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPT 500
Query: 327 --------------------FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
P + Y + L K G ++EA + E + K P
Sbjct: 501 SLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK-NLRPD 559
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
Y+ + C G + A LK M + GC +TY L+ GL + + E +
Sbjct: 560 SVTYDTFIWSFCKQGKISSAFRVLKDMERN-GCSKTLQTYNALILGLGSNNQIFEIYGLK 618
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+EM + P + TYN +I LC GK +A+ L EM+ + P++S + L+ +
Sbjct: 619 DEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKA 674
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 14/338 (4%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEM--DFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
SL ++ VL Q D A+ F+ + F P Y++L++ R + L
Sbjct: 80 SLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYS 139
Query: 211 SMFW-RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M R++ + + L+ +LC+ A+Q+ EK+ +KG + +
Sbjct: 140 DMLAARVAPQ-----TYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRG 194
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C G + + + N R I + Y+ + E E +++++ M G P
Sbjct: 195 LCRAGLVKQALELVNNNNSCR--IANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLP 252
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVK---GTFVPTVRVYNILLKGLCDAGNSAVA 386
+V + ++++AL + G V EA + + + G P V +N++LKG C G A
Sbjct: 253 DVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDA 312
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ M K+VG + E Y I + GL R+G LEA VL+EM+ + P TYN+++
Sbjct: 313 RGLVETM-KKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC +A ++ M+ PD +S+L+ C
Sbjct: 372 GLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYC 409
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L +N+I E+ + D+MK + I G+ +A+SL +
Sbjct: 597 TYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEM 656
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL-NLLMDVLCQCR 165
SF L+K K S + A LF + R ++L +L+ + L
Sbjct: 657 LDKGISPNVSSFKILIKAFSKSSDFKVACELFE---VALNICGRKEALYSLMFNELLAGG 713
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A +F+ + Y L+ LC D RL +A LLY + KG G D
Sbjct: 714 QLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI----DKGYGFDH 769
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKIL 252
+ ++ L +G + A ++ ++++
Sbjct: 770 ASFMPVIDGLSKRGNKRQADELAKRMM 796
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 119/562 (21%), Positives = 221/562 (39%), Gaps = 102/562 (18%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
++ P AL+ F+ A K P H M+ ++ R+ +M EV D M+ +
Sbjct: 64 LRSADGPAEALERFRSAARK-PRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVK 122
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES----KLEA 133
FA G L A + + V ++N L+ +VK LE
Sbjct: 123 ANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEV 182
Query: 134 AHIL------------------------------FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
++ LR VK + S + + VL Q
Sbjct: 183 YRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQ 242
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------- 212
+R D A + +M+ +GC PD ++ +L++ LC+ R+++A + + M
Sbjct: 243 AKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVT 302
Query: 213 -------------------FWR-ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
W + G +++V Y ++ ALC G++ +A+++ +++
Sbjct: 303 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 362
Query: 253 RKGL--------------------------------KAPKSRRHRIDLCPCNDGEDIEGA 280
+KG+ PK + L G+ E
Sbjct: 363 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 422
Query: 281 KSLINEALIR--GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
K++ L++ G +P + + +A+ L GR+ +V E++ G P + Y +
Sbjct: 423 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 482
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K DEA+++ + M++ VP V N L+ L AG A ++ K++
Sbjct: 483 KCCSKASKFDEAVKIFYD-MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL-KEMN 540
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
TY L+ GL R+G+ E +LEEM +Y P + TYN ++ LC G +A+
Sbjct: 541 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDAL 600
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
L M ++ +PD+S +++++
Sbjct: 601 DMLYSMTTKGCIPDLSSYNTVI 622
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 207/476 (43%), Gaps = 49/476 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI S++++ E ++ M ++C + I T +AG+ +EA +F L
Sbjct: 477 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 536
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ N ++NTLL + +E K+ E H+L Y + + N ++D LC+
Sbjct: 537 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL--EEMYHSNYPPNLITYNTILDCLCKNG 594
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ AL + M +GC PD SY+ ++ GL + R NEA +S+F ++ +K D
Sbjct: 595 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA----FSIFCQM-KKVLIPDY 649
Query: 226 VIYRTLLFALCDQGKIQDAMQILEK-ILRKGLKAPKSRRHRI------------------ 266
T+L + G +++A+ I++ L+ G K +S H +
Sbjct: 650 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAE 709
Query: 267 ------------DLCP-----CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
LCP C + +E A L+ + G Y+++ L +E
Sbjct: 710 IIASSGITLDDFFLCPLIKHLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDE 768
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
I + + EM+ G P Y L A+ K ++E L+V +EEM + + T
Sbjct: 769 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV-QEEMHRKGYESTYVT 827
Query: 370 YNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ GL + A+ +Y MS+ G TYG L+DGL + GR +A + E
Sbjct: 828 YNTIISGLVKSRRLEQAIDLYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML YN+L+ G G + ++M+ Q PDI ++ ++ ++C
Sbjct: 886 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 941
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 210/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +L L + K A +IF + KE N Y +++ L ++ E+
Sbjct: 508 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM--NLEPTDGTYNTLLAGLGREGKVKEVM 565
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++++M + + T + + G +N+A+ + +++ C+ S+NT++ +
Sbjct: 566 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 625
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL---ALHVFQEMDFQ-G 181
VKE + A +F + K I L +L + L ALH+ ++ Q G
Sbjct: 626 VKEERYNEAFSIFCQM-----KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 680
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
DR S H LM+G+ + ++ I+ G D L+ LC Q K
Sbjct: 681 SKTDRSSCHSLMEGILKKAGIEKSIEFA----EIIASSGITLDDFFLCPLIKHLCKQKKA 736
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A ++++K G+ K+ + +C D I+ A+ L E G P +Y+
Sbjct: 737 LEAHELVKKFKSFGVSL-KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 795
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ + RI E KV +EM KG+ + V Y ++ L K +++A+++ M +G
Sbjct: 796 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F PT Y LL GL AG A +M + GC AN Y IL++G G +
Sbjct: 856 -FSPTPCTYGPLLDGLLKAGRIEDAENLFNEML-EYGCKANCTIYNILLNGHRIAGNTEK 913
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++M+ + P +++Y ++I LC G+ + + + +++ PD+ ++ L+
Sbjct: 914 VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 972
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 159/373 (42%), Gaps = 36/373 (9%)
Query: 121 LLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
L+K + K+ K AH L + +G +K+ + N L+ L D+A +F EM
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGL--YNSLICGLVDENLIDIAEGLFAEMKE 783
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
GC PD +Y++L+ + R+ E + M +KG V Y T++ L
Sbjct: 784 LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM----HRKGYESTYVTYNTIISGLVKSR 839
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE---------DIEGAKSLINEALIR 290
+++ A+ + ++ +G PC G IE A++L NE L
Sbjct: 840 RLEQAIDLYYNLMSQGFSP----------TPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 889
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDK----VLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G + Y+ L N RI + + +M +G P + Y + L K G
Sbjct: 890 GCKANCTIYNI----LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 945
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+++ L + + G P + YN+L+ GL + AV +M K+ G V N TY
Sbjct: 946 LNDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK-GIVPNLYTY 1003
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ L + G+ EA ++ EE+L + + P V TYN LIRG G A MI
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1063
Query: 467 QAKLPDISVWSSL 479
LP+ S + L
Sbjct: 1064 GGCLPNSSTYMQL 1076
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 164/361 (45%), Gaps = 12/361 (3%)
Query: 13 YLSQIIK---KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+L +IK KQK L A ++ K+ K + + +Y S+I L + N I + +
Sbjct: 722 FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTG--LYNSLICGLVDENLIDIAEGLFA 779
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKES 129
+MK C + + + ++ ++ E + + + + + + ++NT++ +VK
Sbjct: 780 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 839
Query: 130 KLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+LE A L+ + + L+D L + R + A ++F EM GC + Y
Sbjct: 840 RLEQAIDLYY-NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 898
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+IL+ G R+ T + +F + +G DI Y ++ LC G++ D +
Sbjct: 899 NILLNG----HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 954
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++L GL+ P + + + + +E A SL NE +G +P+L +Y+++ + L
Sbjct: 955 QLLEMGLE-PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1013
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G+ E K+ +E+ TKG+ P++ Y A + G D A M+ G +P
Sbjct: 1014 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY-GRMIVGGCLPNSST 1072
Query: 370 Y 370
Y
Sbjct: 1073 Y 1073
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 195/427 (45%), Gaps = 43/427 (10%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
R+G+ ++A+ +F + ++NT++ VK LEA L + + K +
Sbjct: 206 RSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP-KPNV 264
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ N+L+ LC+ R D + EM PD +Y IL GL R E+ +L S
Sbjct: 265 VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT---RTGESQTML-S 320
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL--------------- 256
+F +KG LL LC GK+ A Q+ E ++ GL
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYC 380
Query: 257 ------------KAPKSRRHRIDLCPCN---DG----EDIEGAKSLINEALIRGGIPSLA 297
+ KSR R D N +G E + A+ L+ E G PS+
Sbjct: 381 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 440
Query: 298 SYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+++ + ID Y G++ + VL +M+ KG ++ + + + A K+G + EA+ ++++
Sbjct: 441 TFNTL-IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M+ P +VYN ++ ++G++ A++ ++KM K G A+ TY +L+ GLCR
Sbjct: 500 -MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM-KNSGVSASIVTYNLLLKGLCRS 557
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
+ EA ++ + + P V +YN +I C+ G +A+ L+EM P +
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617
Query: 477 SSLVASV 483
+LV+++
Sbjct: 618 HTLVSAL 624
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 185/409 (45%), Gaps = 15/409 (3%)
Query: 43 HNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
H+GP Y ++ L + R+ E + ++D+M S ++ R G+
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+SLF + + + + LL + K+ K+ A +F + V + + N L
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV-IYNTL 375
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
++ CQ R A +F++M + PD +Y+ L+ GLC + +A L+ M
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM----E 431
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
+ G + + TL+ A G+++ +L + +KG+K+ + C +G+ I
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK-I 490
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A +++++ + + P+ Y+++ ID Y E G + ++++M+ G S+V Y
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSI-IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
L L + +DEA E+I +G P V YN ++ C+ G++ A+ L++M+K
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNK- 607
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
G T LV L GR + + ++ML ++ P Y +++
Sbjct: 608 YGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR-KGLKAPKSRRHRI--- 266
+ F + G+ D + ++ A G + A+ +L ++ R +G P + + +
Sbjct: 143 AAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIA 202
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L G D A + +E + G P+ +Y+ M G + G ++ D+M G
Sbjct: 203 GLWRSGKGSD---ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V Y L+ L + G +DE + +EM + +P Y+IL GL G S
Sbjct: 260 PKPNVVTYNVLLSGLCRTGRMDET-RALMDEMASHSMLPDGFTYSILFDGLTRTGESQT- 317
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ L S + G + T IL++GLC+DG+ +A +V E ++ P YN LI
Sbjct: 318 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLIN 377
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G C + A E+M S+ PD +++L+ +C
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 415
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 172/420 (40%), Gaps = 80/420 (19%)
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N+++ L + + AL VF EM G P+R +Y+ ++ G L L M
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQM 255
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK--------------ILRKGLKA 258
G ++V Y LL LC G++ + ++++ IL GL
Sbjct: 256 L----HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 259 PKSRRHRIDLCP---------------------CNDGEDIEGAKSLINEALIRGGIPSLA 297
+ + L C DG+ + AK + + G +P+
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK-VAKAKQVFEMLVHTGLVPTTV 370
Query: 298 SYSAMAIDLYNEGRIVEGDK-VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + I+ Y + R + G + ++M+++ P + Y A + L K MV +A +++
Sbjct: 371 IYNTL-INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV-M 428
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
EM K P+V +N L+ AG L M +Q G ++ ++G +V C++
Sbjct: 429 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM-QQKGIKSDVISFGSVVKAFCKN 487
Query: 417 GRFLEASRVLEEMLIRSYWP-----------------------------------CVETY 441
G+ EA +L++M+ + P + TY
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTY 547
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
N+L++GLC + EA + + +Q PD+ +++++ S CCN D + + L++++
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII-SACCNKGDTDKALELLQEMN 606
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+PSL+S + + L GR + + G P + + A G +D AL
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 353 VIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++ +G P YN+++ GL +G + A+ +M +G N TY ++D
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMV-DMGVAPNRITYNTMID 237
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G + G R+ ++ML P V TYNVL+ GLC G+ E ++EM S + LP
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP 297
Query: 472 DISVWSSL 479
D +S L
Sbjct: 298 DGFTYSIL 305
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 195/438 (44%), Gaps = 16/438 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I L + R+ + +++ +M+G SCE + + + G++ EA+ L +
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC--- 164
+ ++TL+ + L+ LF + + + L++ C+
Sbjct: 73 RKGLEVDVVVYSTLISGFCSKGCLDRGKALF-DEMLEKGISPNVVVYSCLINGFCKKGLW 131
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R + LH E +G PD +Y ++ GLC D R +A L F +++KG
Sbjct: 132 REATAVLHTMTE---RGIQPDVYTYTCMIGGLCKDGRARKALDL----FDLMTEKGEEPS 184
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
V Y L+ LC +G I DA +I E +L KG + + + + CN+G+ ++ A L
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK-LDEAMKLF 243
Query: 285 NEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ L G P + +++ + L EGR+ + ++ D M +G + +L +
Sbjct: 244 SSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYI 303
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G++D+A+E + + + K VP+ Y++++ G C A +M K G
Sbjct: 304 KSGIIDKAME-LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM-KISGLSPT 361
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
Y L+ LC++ +A R+ +EM + P ++N++I G G + A L
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421
Query: 463 EMISQAKLPDISVWSSLV 480
+M PD +SS +
Sbjct: 422 DMQQMGLTPDAYTYSSFI 439
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 44/333 (13%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I S N +++ LC+ +R + A+ + EM+ C P+ +Y ILM GLC + R+ EA LL
Sbjct: 10 IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M +KG D+V+Y TL+ C +G C
Sbjct: 70 EM----KRKGLEVDVVVYSTLISGFCSKG-----------------------------C- 95
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
++ K+L +E L +G P++ YS + +G E VL M +G P
Sbjct: 96 ------LDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + L KDG +AL++ + KG P+ YN+L+ GLC G A
Sbjct: 150 VYTYTCMIGGLCKDGRARKALDLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIF 208
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW--PCVETYNVLIRGL 448
+ M ++ G +Y L+ GLC +G+ EA ++ +L + P V T+N +I+GL
Sbjct: 209 ETMLEK-GKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
C G+ +AV + MI + ++ L+
Sbjct: 268 CKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD SY+ ++ GLC ++RL +A LL M + S Y L+ LC +G++++
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNS----FTYCILMDGLCKEGRVEE 63
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
AM++L ++ RKGL+ + YS +
Sbjct: 64 AMRLLGEMKRKGLEV------------------------------------DVVVYSTLI 87
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
++G + G + DEM KG P++V+Y + K G+ EA V+ +G
Sbjct: 88 SGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG-I 146
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y ++ GLC G + A+ M+++ G + TY +L++GLC++G +A
Sbjct: 147 QPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK-GEEPSTVTYNVLINGLCKEGCIGDAF 205
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL--PDISVWSSLVA 481
++ E ML + V +YN LI GLC+ GK EA+ ++ PD+ +++++
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265
Query: 482 SVC 484
+C
Sbjct: 266 GLC 268
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 211/492 (42%), Gaps = 57/492 (11%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++ L + R+ E ++ +MK E V++T I + G L+ +LF
Sbjct: 44 NSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALF 103
Query: 104 KNLSQF----NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + N V ++ N K+ + H + R ++ + + ++
Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG-----IQPDVYTYTCMIG 158
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
LC+ R+ AL +F M +G P +Y++L+ GLC + + +A + +F + +K
Sbjct: 159 GLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDA----FKIFETMLEK 214
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS------------RRHRID 267
G ++V Y TL+ LC+ GK+ +AM++ +L G + R+D
Sbjct: 215 GKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLD 274
Query: 268 -------------------LCPCNDGEDIEGAKSLINEAL-------IRGGIPSLASYSA 301
C GE I+ +I++A+ G +PS +YS
Sbjct: 275 KAVEIYDTMIERGSFGNLFTCHILIGEYIKSG--IIDKAMELWKRVHKLGLVPSSTTYSV 332
Query: 302 MAIDLYNEGRIVEGDK-VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
M ID + + ++ K + M+ G P+L Y +A+L K+ +++A + +E M +
Sbjct: 333 M-IDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQE-MKE 390
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P +NI++ G AG+ A L M +Q+G + TY ++ L + G+
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM-QQMGLTPDAYTYSSFINRLSKLGQME 449
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA + M+ P Y+ LI+G + E + L +M + D+ + +S++
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509
Query: 481 ASVCCNTADLNV 492
+C + L+V
Sbjct: 510 TFLCNSAEHLHV 521
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 169/410 (41%), Gaps = 41/410 (10%)
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ + N + S+NT++ + KE +LE A + L G + + +LMD LC+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKA-VDLLVEMEGSSCEPNSFTYCILMDGLCKEG 59
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R + A+ + EM +G D Y L+ G C+ L+ L M +KG ++
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEML----EKGISPNV 115
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V+Y L+ C +G ++A +L + +G++ + C DG A L +
Sbjct: 116 VVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR-ARKALDLFD 174
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+G PS +Y+ + L EG I + K+ + M KG +V Y + L +G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234
Query: 346 MVDEALEVIEEEMVKGTFV-PTVRVYNILLKGLCDAGNSAVAV----------------- 387
+DEA+++ + G +V P V +N +++GLC G AV
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294
Query: 388 -----------------MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
M L K ++G V + TY +++DG C+ A + M
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I P + YN L+ LC +A +EM PD ++ ++
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMI 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 38/263 (14%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DIV Y T++ LC + +++ A+ +L ++ +G E
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEM---------------------EGSSCE----- 42
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P+ +Y + L EGR+ E ++L EM+ KG +V+Y ++
Sbjct: 43 ----------PNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCS 92
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G +D + +E + KG P V VY+ L+ G C G A L M+++ G +
Sbjct: 93 KGCLDRGKALFDEMLEKG-ISPNVVVYSCLINGFCKKGLWREATAVLHTMTER-GIQPDV 150
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++ GLC+DGR +A + + M + P TYNVLI GLC G +A E
Sbjct: 151 YTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFET 210
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+ + K ++ +++L+ +C N
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNN 233
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+P + SY+ + L E R+ + +L EM P+ Y + L K+G V+EA+
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
++ E KG V V VY+ L+ G C G +M ++ G N Y L++G
Sbjct: 67 LLGEMKRKGLEVDVV-VYSTLISGFCSKGCLDRGKALFDEMLEK-GISPNVVVYSCLING 124
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
C+ G + EA+ VL M R P V TY +I GLC G+ +A+ + M + + P
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184
Query: 473 ISVWSSLVASVC 484
++ L+ +C
Sbjct: 185 TVTYNVLINGLC 196
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M + +P + YN ++ GLC AV L +M C N TY IL+DGLC++G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGS-SCEPNSFTYCILMDGLCKEG 59
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA R+L EM + V Y+ LI G CS G +EM+ + P++ V+S
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYS 119
Query: 478 SLVASVC 484
L+ C
Sbjct: 120 CLINGFC 126
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 51/424 (12%)
Query: 64 MKEVIDQMKGDS-CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
M+E++ Q+K ++ + +F I Y RA + A +F+ + F C +S N+LL
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 123 KEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++K +LE +F+ S YG + N+L+ C C D VF EM +G
Sbjct: 61 AALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRG 117
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSM--FWRISQKGSGEDIVIYRTLLFALCDQG 239
P+ ++ L+ GL + +L EA L M + I S IY TL+ C G
Sbjct: 118 VKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNAS-----IYTTLIKGFCGVG 172
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ A ++ E+++ +K A Y
Sbjct: 173 ELNFAFKLKEEMVTSNVKLVS------------------------------------AVY 196
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + L+ GR E +L EM G P V Y A + K+ ++ A V++E +
Sbjct: 197 STLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVE 256
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG P V +N ++ LC G A+ L+ M ++ GC + +Y I+ DGLC +
Sbjct: 257 KGC-KPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRR-GCPPDVLSYRIIFDGLCEMMQL 314
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA+ +L+EM+ + Y P E+ N L+ LC E + + + + ++ +W+ +
Sbjct: 315 KEATSILDEMIFKGYVPRNESINKLVDRLCQ-ECNMELLWMILNSLGRGNRMNMDMWARV 373
Query: 480 VASV 483
VA V
Sbjct: 374 VAFV 377
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 11/279 (3%)
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL- 268
+ +F RI + +LL AL +++ Q+ I G +P + I +
Sbjct: 38 FQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG--SPDACTFNILIH 95
Query: 269 --CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTK 325
C C D + + G + +E RG P++ ++ + L ++ E ++ ++M +
Sbjct: 96 AACLCGDLDAVWG---VFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVY 152
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P+ +Y + G ++ A + ++EEMV VY+ L+ L G
Sbjct: 153 MIKPNASIYTTLIKGFCGVGELNFAFK-LKEEMVTSNVKLVSAVYSTLISALFKHGRKEE 211
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
L++M + GC + TY +++G C++ A RV++EM+ + P V ++N +I
Sbjct: 212 VSDILREMGEN-GCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 270
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC GK +A+ LE+M + PD+ + + +C
Sbjct: 271 GWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLC 309
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 31 FKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTY 90
KE K + N +Y ++I + ++ ++M + + +V++T I
Sbjct: 144 LKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISAL 203
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
+ G+ E + + + + C T ++N ++ KE+ LE+AH + + K
Sbjct: 204 FKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRV-MDEMVEKGCKPD 262
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ S N ++ LC+ + D A+ + ++M +GC PD SY I+ GLC +L EAT +L
Sbjct: 263 VFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILD 322
Query: 211 SMFWR 215
M ++
Sbjct: 323 EMIFK 327
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N + VY+++I L + R E+ +++ +M + C+ + I + + L A
Sbjct: 188 NVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESA 247
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLN 155
+ + + C SFNT++ + KE KL+ A L R C + S
Sbjct: 248 HRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGC-----PPDVLSYR 302
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
++ D LC+ + A + EM F+G P ES + L+ LC +
Sbjct: 303 IIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQE 346
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 43/368 (11%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D+M+ C + + + G++++A+ +NL + T S+N +LK +
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ E A L + + + N+L+ LC+ + A+ V +++ GC P+
Sbjct: 62 FTAERWEDAEKLMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+ L+ C +++++A + M R G DIV Y TLL ALC G++ A+
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSR----GCYPDIVSYNTLLTALCRNGEVDVAI 176
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+L ++ KG C+ P L SY+ +
Sbjct: 177 DLLHQLKGKG---------------CS---------------------PVLISYNTVIDG 200
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L G+ E ++LDEM +KG P ++ Y + L ++ ++EA+ + G P
Sbjct: 201 LTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMG-IRP 259
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
TV +YN +L GLC + A+ M GC+ N TY ILV+GL +G EA +
Sbjct: 260 TVVLYNAILLGLCKRRETHNAIDLFSYMISN-GCMPNESTYTILVEGLAYEGLVKEARDL 318
Query: 426 LEEMLIRS 433
L ++ R
Sbjct: 319 LGQLCSRG 326
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 48/333 (14%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
I + N++++ +CQ R D A+ + + G P+ SY+I++KGL R +A L+
Sbjct: 16 IITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLME 75
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
M + KG ++V + L+ LC +G ++ AM++LE+I PK
Sbjct: 76 EM----AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQI-------PK---------- 114
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G P+ SY+ + + ++ + ++ M ++G +P
Sbjct: 115 -------------------YGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPD 155
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+V Y L AL ++G VD A++++ + KG P + YN ++ GL AG + A+ L
Sbjct: 156 IVSYNTLLTALCRNGEVDVAIDLLHQLKGKGC-SPVLISYNTVIDGLTKAGKTKEALELL 214
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV---LEEMLIRSYWPCVETYNVLIRG 447
+M + G + TY + GLCR+ + EA R +++M IR P V YN ++ G
Sbjct: 215 DEMISK-GLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIR---PTVVLYNAILLG 270
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
LC + + A+ MIS +P+ S ++ LV
Sbjct: 271 LCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 38/269 (14%)
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ KG DI+ Y +L +C +G++ DAM+ LE +
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPS---------------------- 44
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
GG P+ SY+ + L+ R + +K+++EM KG P++V +
Sbjct: 45 --------------YGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 90
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
++ L + G+V+ A+EV+E+ + K P YN LL C A+ +++ M
Sbjct: 91 MLISFLCRRGLVEPAMEVLEQ-IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVS 149
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ GC + +Y L+ LCR+G A +L ++ + P + +YN +I GL GK
Sbjct: 150 R-GCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTK 208
Query: 456 EAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA+ L+EMIS+ PDI ++++ + +C
Sbjct: 209 EALELLDEMISKGLQPDIITYTTIASGLC 237
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 3/184 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
K+LDEMR KG P ++ Y L + ++G VD+A+E +E G P YNI+LKG
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGG-EPNTVSYNIVLKG 60
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L A A +++M+ + GC N T+ +L+ LCR G A VLE++ P
Sbjct: 61 LFTAERWEDAEKLMEEMAHK-GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTP 119
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKT 496
+YN L+ C K +A+ ++E M+S+ PDI +++L+ ++C N +++V
Sbjct: 120 NSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRN-GEVDVAIDL 178
Query: 497 LEQL 500
L QL
Sbjct: 179 LHQL 182
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 144/336 (42%), Gaps = 44/336 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++ + + R+ + E ++ + E + ++ A + +A L + +
Sbjct: 18 TYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 77
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ C +FN L+ + + +E A +L YG S S N L+ C+ +
Sbjct: 78 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL--SYNPLLHAFCKQK 135
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ D A+ + M +GCYPD SY+ L+ LC + ++ A LL+ ++ KG +
Sbjct: 136 KMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH----QLKGKGCSPVL 191
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
+ Y T++ L GK ++A+++L++++ KGL+
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQ---------------------------- 223
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
P + +Y+ +A L E +I E + +++ G P++V+Y A L L K
Sbjct: 224 --------PDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRR 275
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
A+++ M+ +P Y IL++GL G
Sbjct: 276 ETHNAIDLF-SYMISNGCMPNESTYTILVEGLAYEG 310
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 214/493 (43%), Gaps = 46/493 (9%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATA 86
++ FK A ++ N+ H+ Y +I L + EM ++I +M + +C + +
Sbjct: 79 IQFFKWAGKRR-NFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEV 137
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
++ +A +N+A+S+F + C ++N+++ +++E E H L+ C +
Sbjct: 138 VKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGD 197
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVF-------------------------------- 174
+ ++L+ + R D A+ +F
Sbjct: 198 CFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALG 257
Query: 175 --QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
QEM +GC P +Y L+KGL R+ +A YS+F + + G D+V+ L+
Sbjct: 258 LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDA----YSVFLNMLKDGCKPDVVLINNLI 313
Query: 233 FALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGE-DIEGAKSLINEALIR 290
G+++DA+++ +++ + LK AP + + + + A S +
Sbjct: 314 NIFGKAGRLEDALKLFDQM--RSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKAN 371
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G PS +YS + R+ + +L+EM KGF P Y + + AL K + A
Sbjct: 372 GVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 431
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E+ E+ + + R+Y +++K L G + AV +M K++GC + Y L+
Sbjct: 432 NELF-LELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEM-KKIGCNPDVYAYNALM 489
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GL R G EA L M P + ++N+++ GL G+ +A +M
Sbjct: 490 SGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIK 549
Query: 471 PDISVWSSLVASV 483
PD +++++ S+
Sbjct: 550 PDAVSYNTILGSL 562
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 10/411 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ + R + D+MK + ++ T + Y ++G +A+ L + +
Sbjct: 204 TYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEM 262
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++ L+K + K ++E A+ +FL K + +N L+++ + R
Sbjct: 263 KDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDG-CKPDVVLINNLINIFGKAGR 321
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR-LNEATHLLYSMFWRISQKGSGEDI 225
+ AL +F +M C P+ +Y+ ++K L + +EA S F ++ G
Sbjct: 322 LEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAA----SWFEKMKANGVTPSS 377
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ C +++ A+ +LE++ KG P + + + E A L
Sbjct: 378 FTYSILIDGFCKTNRVEKALLLLEEMDEKGF-PPCPAAYCSLINALGKAKRYEAANELFL 436
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E G S Y+ M +L GR E + +EM+ G P + Y A ++ L + G
Sbjct: 437 ELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAG 496
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
M++EA + M + P + +NI+L GL G A KM + + +
Sbjct: 497 MIEEAFSALRT-MEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSL-IKPDAVS 554
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
Y ++ L R G F EA++++ EM R + TY+ ++ + + + E
Sbjct: 555 YNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 203/482 (42%), Gaps = 51/482 (10%)
Query: 7 RLLTPTYLSQIIKKQKSPL--TALKIF---KEAKEKYPNYRHNGPVYASMIGILSESNRI 61
R L P+ ++ + +P + L++F ++ P H+ Y +I +L +S+R
Sbjct: 81 RRLAPSPVAAAAALRHAPCASSTLQLFSALHSSQLAIPPSAHS---YRYVISMLCQSSRH 137
Query: 62 TEMKEVIDQMKGDSCECKDSVFATAIR-TYARAGQLNEAVSLFKNLSQFNCVNWTQSFNT 120
T+ ++ DQM S ++ F + + + A AG L+ A +L QF C ++N
Sbjct: 138 TDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNK 197
Query: 121 LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ 180
L+ + +++ A LF G + S N+ + +CQ AL + + M
Sbjct: 198 LMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEF 257
Query: 181 GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG-SGEDIVIYRTLLFALCDQG 239
GC PD + +IL+ GLC + ++ +L R+ + G ++V Y +++ C G
Sbjct: 258 GCSPDTVTNNILVGGLCRVKEVSRGREVLR----RLQRDGVCMPNVVTYTSVISGYCKSG 313
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+++DAM + N+ + G P+ +Y
Sbjct: 314 RMEDAMAVY------------------------------------NDMIGCGTTPNAVTY 337
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
+ + G + V +M + P +V + + + G +D+A+ EM
Sbjct: 338 NVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTW-TEMS 396
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
+ P ++I++ C SA A+ +LK+++ + ++D LC+ G+
Sbjct: 397 QYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKV 456
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA+ +L EM + P TY +LI G C G+ EA+ + +M+ PD +S
Sbjct: 457 DEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSF 516
Query: 480 VA 481
+
Sbjct: 517 IG 518
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 2/258 (0%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
YR ++ LC + DA+++ +++ + P +R C + ++ A +L+++A
Sbjct: 124 YRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKA 183
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE-MRTKGFWPSLVMYEAKLAALFKDGM 346
G +Y+ + GR+ + + + ++ + P + + + + + G
Sbjct: 184 PQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGD 243
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V +ALE++E M + P NIL+ GLC + L+++ + C+ N TY
Sbjct: 244 VQKALELVER-MAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTY 302
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ G C+ GR +A V +M+ P TYNVLI G G AV ++MI
Sbjct: 303 TSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMIL 362
Query: 467 QAKLPDISVWSSLVASVC 484
+ PD+ +S+L+ C
Sbjct: 363 RRCPPDVVTFSTLIDGYC 380
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 9/229 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I ++ + V QM C F+T I Y R GQL++A+ +
Sbjct: 333 NAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTW 392
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLC 162
+SQ+ +F+ ++ K+++ A + FL+ ++ R N ++DVLC
Sbjct: 393 TEMSQYQIQPNAHTFSIIILSFCKQNR-SAEALRFLKELNMRTDIAPRAFICNPVIDVLC 451
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A + EM+ +GC PD+ +Y IL+ G C R++EA + F ++ G
Sbjct: 452 KGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAI----TFFNKMVDTGCS 507
Query: 223 EDIVIYRTLLFALCDQG---KIQDAMQILEKILRKGLKAPKSRRHRIDL 268
D + + + L G ++ M+I + P ID+
Sbjct: 508 PDSITVNSFIGCLLKAGMPSEVDRIMKIASGSTSSSQEVPSPVSQSIDI 556
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 171/441 (38%), Gaps = 53/441 (12%)
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---- 146
AR G N L + + + + +F L+ M K +++ A + + G E
Sbjct: 316 AREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375
Query: 147 ---VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRL 202
V+ + N L+D LC+ R L + + M Q GC PD +Y+ L+ G C +
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ L F ++++G ++V TL+ +C G++ A+ + R+G+K
Sbjct: 436 EKGKEL----FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN + E A L NE L G P Y + GR+ + VL E+
Sbjct: 492 YTALINAFCN-VNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE-------------------------- 356
+ G P V Y + + E+++E
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610
Query: 357 --------EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+M+K VPTV Y ++ C GN A+ K M N Y I
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L++ LC++ + A ++E+M I P TYN + +GL + +++ MI A
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA 730
Query: 469 KLPD------ISVWSSLVASV 483
PD ++ W S V +
Sbjct: 731 CNPDYITMEILTEWLSAVGEI 751
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 176/404 (43%), Gaps = 16/404 (3%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
R + N LF + + V + + N+LL + +E + L + +++ +
Sbjct: 282 RNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNEL-MEKMVEMDIQPNV 340
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQ--------GCYPDRESYHILMKGLCNDRRLN 203
+ +L++ +C+ RR D AL V ++M PD Y+ L+ GLC R
Sbjct: 341 VTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQ 400
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
E L+ M SQKG D + Y L+ C G+I+ ++ +++ ++G+
Sbjct: 401 EGLGLMERMR---SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTV 457
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+ + C G + A + EA RG +Y+A+ N + ++ +EM
Sbjct: 458 NTLVGGMCRTGR-VSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P ++Y ++ + G + +A V+ E + K P YN L+ G C
Sbjct: 517 KSGCSPDAIVYYTLISGFSQAGRMADASFVLAE-LKKLGIRPDTVCYNTLIGGFCRTNKF 575
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
LK+M ++ G + TY L+ ++G A +V+ +M+ P V TY
Sbjct: 576 HRVFEMLKEM-EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGA 634
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVCCN 486
+I C G EA+ ++M + +K+ P+ +++ L+ S+C N
Sbjct: 635 VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 142/348 (40%), Gaps = 43/348 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I ++ I + KE+ D+M + T + R G+++ AV+ F
Sbjct: 421 TYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF--- 477
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+EA R G V + L++ C
Sbjct: 478 ------------------------VEAQR----RGMKGDAV-----TYTALINAFCNVNN 504
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ +F EM GC PD Y+ L+ G R+ +A+ +L + + G D V
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA----ELKKLGIRPDTV 560
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ C K ++L+++ GLK P + + + + D++ A+ ++ +
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK-PDTITYNTLIAYASKNGDLKFAQKVMRK 619
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG-FWPSLVMYEAKLAALFKDG 345
+ G +P++A+Y A+ G E ++ +M+ P+ V+Y + +L K+
Sbjct: 620 MIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNN 679
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
V A+ ++E+ + G P YN + KGL D + ++ +M
Sbjct: 680 KVKSAVSLMEDMKIWGV-TPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 11/255 (4%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A+ F EA+ + + + Y ++I N + E+ ++M C V+ T
Sbjct: 472 SAVNFFVEAQRR--GMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYT 529
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCY 143
I +++AG++ +A + L + T +NTL+ + +K H +F L+
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF---HRVFEMLKEME 586
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+K + N L+ + A V ++M G P +Y ++ C + N
Sbjct: 587 EAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGN 646
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
EA + M + + K + VIY L+ +LC K++ A+ ++E + G+ P +
Sbjct: 647 EAMEIFKDM--KAASK-VPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGV-TPNTTT 702
Query: 264 HRIDLCPCNDGEDIE 278
+ D +D+E
Sbjct: 703 YNAIFKGLRDEKDLE 717
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 189/438 (43%), Gaps = 36/438 (8%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R+ E ++I+ G C + I Y R G + + L + + ++
Sbjct: 993 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYG 1052
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVF 174
+L+ + K+ LE LFL E++ R +Q N ++D LC CR + A+ +
Sbjct: 1053 SLINWLGKKGDLEKIGSLFL------EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVIL 1106
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M GC PD +++ L+ GLC++ + +A H L R + Y L+
Sbjct: 1107 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQ----LSYTPLIHG 1162
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG--AKSLINEALI--- 289
C +G++ A +L +++ +G H D+ G I G ++EALI
Sbjct: 1163 FCMRGELMVASDLLVEMMGRG--------HTPDV--VTFGALIHGLVVAGKVSEALIVRE 1212
Query: 290 ----RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
R P + Y+ + L + + +L+EM K P +Y + +
Sbjct: 1213 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1272
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A ++ E KG P + N ++KG C G + A++ + M K VGC+ + T
Sbjct: 1273 NLGDARKIFEFMEHKGV-CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK-VGCIPDEFT 1330
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G + G A R L +M+ R P V TY+ LI G C G A M
Sbjct: 1331 YTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQ 1390
Query: 466 SQAKLPDISVWSSLVASV 483
++A P++ ++ L+ S+
Sbjct: 1391 AEALSPNVVTYTILIGSL 1408
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 189/465 (40%), Gaps = 71/465 (15%)
Query: 87 IRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ YA AG L +A + + + Q+ + N LLK +V++ + + A L+ G
Sbjct: 914 VAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLY-DEMLGK 972
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + S +L+ LC RR + L + + GC P Y++L+ G C +
Sbjct: 973 DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 1032
Query: 206 THLLY-------------------------------SMFWRISQKGSGEDIVIYRTLLFA 234
LL S+F + ++G ++ IY +++ A
Sbjct: 1033 LLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDA 1092
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC+ AM IL+++ G + + C++G + A+ + EA+ R P
Sbjct: 1093 LCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH-VRKAEHFLREAIRRELNP 1151
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SY+ + G ++ +L EM +G P +V + A + L G V EAL ++
Sbjct: 1152 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL-IV 1210
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+M + P V +YN+L+ GLC A L++M ++ + Y L+DG
Sbjct: 1211 REKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFI 1269
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM--------------- 459
R +A ++ E M + P + + N +I+G C G EA++
Sbjct: 1270 RSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 1329
Query: 460 --------------------WLEEMISQAKLPDISVWSSLVASVC 484
WL +MI + P++ +SSL+ C
Sbjct: 1330 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 198/553 (35%), Gaps = 71/553 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T L + K+ +F E +++ + N +Y S+I L T+
Sbjct: 1046 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR--GFSPNVQIYNSVIDALCNCRSATQAM 1103
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ QM C+ F T I G + +A + + S+ L+
Sbjct: 1104 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+L A L + G + + L+ L + AL V ++M + +PD
Sbjct: 1164 CMRGELMVASDLLV-EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1222
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y++L+ GLC R L A ++L M +K D +Y TL+ + DA
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEML----EKNVQPDEFVYATLIDGFIRSENLGDAR 1278
Query: 246 QILEKILRKGLKA----------------------------------PKSRRHRIDLCPC 271
+I E + KG+ P + +
Sbjct: 1279 KIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
++ GA + + + R P++ +YS++ G + + M+ + P++
Sbjct: 1339 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 1398
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL------------CD 379
V Y + +LFK V A + E M+ P + L+ GL C+
Sbjct: 1399 VTYTILIGSLFKKDKVLRA-GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1457
Query: 380 A----GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G A+ V++ KK+ +G N Y ++ LCR EA M + Y
Sbjct: 1458 TSEVHGKDALLVVF-KKLVFDIGDPRN-SAYNAIIFSLCRHNMLREALDFKNRMAKKGYV 1515
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL-----VASVCCNTADL 490
P T+ L+ G CS+GK L Q + I + L SVCC +
Sbjct: 1516 PNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVS-- 1573
Query: 491 NVCRKTLEQLSSC 503
+ L+ L+ C
Sbjct: 1574 ----RVLQHLAGC 1582
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 183/404 (45%), Gaps = 10/404 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
V+ ++ + + + + +V+D+M CE + VF + + G + EA SLF+ L
Sbjct: 168 VFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEEL 227
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
++ + F +LL KE KL EA H+L G ++ I N L+ Q
Sbjct: 228 -RYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAG--IEPDIVVYNNLLGGYAQAD 284
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ A + +EM +GC P+ SY +L++ LC RL EAT + M + G D+
Sbjct: 285 KMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEM----QRNGCQADL 340
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y TL+ C GKI+ ++L++++++G P ++ + E++E K L+N
Sbjct: 341 VTYSTLISGFCKWGKIKRGYELLDEMIQQG-HFPNQVIYQHIMVAHEKKEELEECKELVN 399
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E G P L+ Y+ + G + EG ++ +EM + G PS+ + + + G
Sbjct: 400 EMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQG 459
Query: 346 MVDEALEVIEEEMVKGTF-VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
+ EA E +E + +G F P L+ L A +A ++ GC N
Sbjct: 460 CLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVS 519
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ I + L G EA M+ + P +T+ L+RGL
Sbjct: 520 AWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGL 563
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 10/302 (3%)
Query: 186 RESYHILMKGLCNDRRLN---EATHLLYSMF-WRISQKGSGEDIVIYRTLLFALCDQGKI 241
RES ++ GL +R LN +A +L Y + W Q G D Y+ ++ L +
Sbjct: 88 RESGVVVRPGL-TERVLNRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQF 146
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
++E++ ++ + I + + A +++E G P +
Sbjct: 147 GAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGC 206
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFW-PSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ L G + E + +E+R + W PS+ + + L K+G + EA V+ + M
Sbjct: 207 LLDALRKNGSVKEAASLFEELRYR--WKPSVKHFTSLLYGWCKEGKLMEAKHVLVQ-MKD 263
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
P + VYN LL G A A LK+M ++ GC N +Y +L+ LC+ R
Sbjct: 264 AGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRK-GCEPNATSYTVLIQSLCKHERLE 322
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA+RV EM + TY+ LI G C GK L+EMI Q P+ ++ ++
Sbjct: 323 EATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIM 382
Query: 481 AS 482
+
Sbjct: 383 VA 384
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 42/331 (12%)
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D ++Y ++K L R+ L+ M + + VI L+ + A
Sbjct: 129 DHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVI---LMRRFASARMVHKA 185
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+Q+L+++ G + P L ++ A SL E R PS+ ++++
Sbjct: 186 VQVLDEMPNYGCE-PDEYVFGCLLDALRKNGSVKEAASLFEELRYRWK-PSVKHFTSLLY 243
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
EG+++E VL +M+ G P +V+Y L + + +A ++++E KG
Sbjct: 244 GWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGC-E 302
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P Y +L++ LC A +M + GC A+ TY L+ G C+ G+
Sbjct: 303 PNATSYTVLIQSLCKHERLEEATRVFVEMQRN-GCQADLVTYSTLISGFCKWGKIKRGYE 361
Query: 425 VLEEMLIRSYWPC-----------------------------------VETYNVLIRGLC 449
+L+EM+ + ++P + YN +IR C
Sbjct: 362 LLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLAC 421
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+G+ E V EM S P I + ++
Sbjct: 422 KLGEVKEGVRLWNEMESSGLSPSIDTFVIMI 452
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VLDEM G P ++ L AL K+G V EA + EE ++ + P+V+ + LL G
Sbjct: 187 QVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEE--LRYRWKPSVKHFTSLLYG 244
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
C G A L +M K G + Y L+ G + + +A +L+EM + P
Sbjct: 245 WCKEGKLMEAKHVLVQM-KDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEP 303
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+Y VLI+ LC + EA EM D+ +S+L++ C
Sbjct: 304 NATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFC 351
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 221/494 (44%), Gaps = 28/494 (5%)
Query: 4 RWPRLLTPTYLSQII-----KKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
+ PR+L+PT + I + P AL F + R + + + ++ E+
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRT--GLRVDAIIASHLLKGFCEA 161
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAI--RTYARAGQLNEAVSLFKNLSQFN--CVNW 114
R E +++ + C VF+ I ++ G+ +A L + +++ C
Sbjct: 162 KRTDEALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPD 220
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
++NT++ KE + A LF + + + + + ++ LC+ R D A
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLF-KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M +G PD +Y+ L+ G + + EA + F + ++ D+V TL+ +
Sbjct: 280 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV----FKEMRRQSILPDVVALNTLMGS 335
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA----KSLINEALIR 290
LC GKI++A + + + KG + P + I L +G +G L + L
Sbjct: 336 LCKYGKIKEARDVFDTMAMKG-QNPDVFSYTIML----NGYATKGCLVDMTDLFDLMLGD 390
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +++ + N G + + + +EMR G P +V Y +AAL + G +D+A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+E + M+ VP Y+ L++G C G+ A + ++ G + +G ++
Sbjct: 451 MEKFNQ-MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSII 508
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ LC+ GR ++A + + + P YN+L+ G C +GK +A+ + M+S
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568
Query: 471 PDISVWSSLVASVC 484
P++ + +LV C
Sbjct: 569 PNVVGYGTLVNGYC 582
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 18/458 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++FKE + + + + +++G L + +I E ++V D M +
Sbjct: 310 AVRVFKEMRRQ--SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ YA G L + LF + +FN L+K L+ A I+F
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF-NEMRDHG 426
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
VK + + ++ LC+ + D A+ F +M QG PD+ +YH L++G C L +A
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ I G DIV + +++ LC G++ DA I + + GL P + + +
Sbjct: 487 ELI----SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLH-PDAVVYNM 541
Query: 267 DLCPCNDGEDIEGA--KSL-INEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ DG + G K+L + +A++ GI P++ Y + GRI EG + EM
Sbjct: 542 LM----DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG PS ++Y + LF+ G A +V EM + Y+I+L+GL
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPA-KVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ K++ + + + T ++ G+ + R EA + + PC TY+
Sbjct: 657 FDEAIFLFKEL-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++I L G EA M + PD + + +V
Sbjct: 716 IMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 171/421 (40%), Gaps = 49/421 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S++ L ++ + + + + QM + + I Y+ GQ EAV +FK +
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + + NTL+ + K K++ A +F +V S LN C
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+DL F M G PD ++++L+K N L++A +F + G
Sbjct: 378 VDMTDL----FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM----IIFNEMRDHGVKP 429
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y T++ ALC GK+ DAM+ +++ +G+ K H + C G ++ AK L
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK-AKEL 488
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I+E + G + + ++ +L GR+++ + D G P V
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV----------- 537
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
VYN+L+ G C G A+ M G N
Sbjct: 538 -------------------------VYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNV 571
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
YG LV+G C+ GR E + EML + P YN++I GL G+ A + E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 464 M 464
M
Sbjct: 632 M 632
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 7/326 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + +++ LC+ + A +F++M GC PD +Y ++ LC DRR+NEA +
Sbjct: 10 VHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI-- 67
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
F + KG +I Y +L+ LC+ + ++A +L +++ + +
Sbjct: 68 --FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G E A+ ++ G P++ +YS++ + + E K+ D M TKG P
Sbjct: 126 CKEGNVFE-ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y + K + EA ++ E M+ P + YN L+ GLC G A
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNE-MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
K M G + + TY IL+DG C+ G +A R+ M P + YN+LI +C
Sbjct: 244 KNMLTN-GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 302
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVW 476
EA E+ Q P++ W
Sbjct: 303 SRNLKEARKLFSELFVQGLQPNMKHW 328
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 8/321 (2%)
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
+G PD +Y ++ GLC ++ E T +F ++ + G D+V Y T++ +LC
Sbjct: 4 RGYQPDVHTYTTIINGLC---KIGE-TVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDR 59
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
++ +A+ I + KG+ + + CN E A +++NE + +P++ ++
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWRE-ASAMLNEMMSLNIMPNIVTF 118
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMV 359
S + EG + E VL M G P++V Y + + V EA ++ + +
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178
Query: 360 KGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRF 419
KG P V YNIL+ G C A A +M Q G + +Y L+DGLC+ GR
Sbjct: 179 KGC-KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRL 236
Query: 420 LEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EA + + ML P + TY++L+ G C G +A M S P++ +++ L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296
Query: 480 VASVCCNTADLNVCRKTLEQL 500
+ ++ C + +L RK +L
Sbjct: 297 IDAM-CKSRNLKEARKLFSEL 316
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
MV + P V Y ++ GLC G + A KKM + GC + TY ++D LC+D
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMG-EAGCQPDVVTYSTIIDSLCKDR 59
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R EA + M + P + TYN LI+GLC+ + EA L EM+S +P+I +S
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 478 SLVASVCCNTADLNVCRKTLEQLS 501
L+ ++ C ++ R L+ ++
Sbjct: 120 LLI-NIFCKEGNVFEARGVLKTMT 142
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 20/305 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + + + K + AL IF K K N Y S+I L +R E
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK--GISPNIFTYNSLIQGLCNFSRWREAS 100
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF----NCVNWTQSFN-- 119
++++M + F+ I + + G + EA + K +++ N V ++ N
Sbjct: 101 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 160
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDF 179
+L E+ + KL ++ + C K + S N+L++ C+ +R A +F EM
Sbjct: 161 SLQAEVFEARKL--FDVMITKGC-----KPDVFSYNILINGYCKAKRIGEAKQLFNEMIH 213
Query: 180 QGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
QG PD SY+ L+ GLC RL EA L +M G+ D+ Y LL C QG
Sbjct: 214 QGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML----TNGNLPDLCTYSILLDGFCKQG 269
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ A ++ + LK P + I + +++ A+ L +E ++G P++ +
Sbjct: 270 YLAKAFRLFRAMQSTYLK-PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
Query: 300 SAMAI 304
I
Sbjct: 329 KLFEI 333
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 6/321 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ + Y ++I L + + +M C+ ++T I + + ++NEA+
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+F + ++N+L++ + S+ A + L + I + +LL+++
Sbjct: 66 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM-LNEMMSLNIMPNIVTFSLLINI 124
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
C+ A V + M G P+ +Y LM G + EA L M KG
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI----TKG 180
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ Y L+ C +I +A Q+ +++ +GL + + C G + A
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR-LREA 239
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L L G +P L +YS + +G + + ++ M++ P++VMY + A
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299
Query: 341 LFKDGMVDEALEVIEEEMVKG 361
+ K + EA ++ E V+G
Sbjct: 300 MCKSRNLKEARKLFSELFVQG 320
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 191/413 (46%), Gaps = 29/413 (7%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM-VKESKLEAAHIL---- 137
F+ I +A+ GQ+ A SL N+ + + TL+K + +K LEA +L
Sbjct: 108 FSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYV 167
Query: 138 -----FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
F CYG +++ LC+ ++ A+ +F +M YP+ Y+ +
Sbjct: 168 DRGFRFDEVCYGT-----------IINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTV 216
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ GLC ++EA L M + G D+ Y +++ C G+ Q A+++L++++
Sbjct: 217 IDGLCKQGLVDEACGLCTEMV----ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMV 272
Query: 253 RKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+G P I + C G + A +++ + RG P + SY+A+ G
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGR-VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS 331
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ E +V D+M + P+++ Y + K MVDEA+ V+ EM VP YN
Sbjct: 332 VGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM-VLLTEMHNKNLVPDTVTYN 390
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
LL GL +G S ++ M + G A+ TY +L+D + +F +A + + ++
Sbjct: 391 CLLDGLSKSGRSLYEWDLVEAM-RASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE 449
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYN+L+ GLC G+ A + + ++ P+I ++ ++ +C
Sbjct: 450 IGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLC 502
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 183/424 (43%), Gaps = 44/424 (10%)
Query: 25 LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFA 84
L A+ + E ++ +R + Y ++I L + + + ++ +MK ++
Sbjct: 157 LEAVSLLHEYVDR--GFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYN 214
Query: 85 TAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYG 144
T I + G ++EA L + + S+N+++ + +AA L
Sbjct: 215 TVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVR 274
Query: 145 WEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+V + + N+L+D LC+ R A +V M +G PD SY+ LM G C + E
Sbjct: 275 GKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGE 334
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A + F ++ ++ + +++ Y TL+ C + +AM +L ++ K L
Sbjct: 335 AKQV----FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNL-------- 382
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+P +Y+ + L GR + +++ MR
Sbjct: 383 ----------------------------VPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRA 414
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G L+ Y L FK D+AL + + +++ P +R YNILL GLC +G
Sbjct: 415 SGQPADLITYNVLLDDYFKHEKFDKALALF-QHIIEIGISPNIRTYNILLDGLCKSGRLK 473
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A + +S + GC N TY I++ GLC++G EA +L +M+ +Y P T++ +
Sbjct: 474 YAKEIFQLLSAK-GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTI 532
Query: 445 IRGL 448
+R +
Sbjct: 533 VRAI 536
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 41/385 (10%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
N+ VS F ++ + Q FN LL ++K + A L+ +K + + +
Sbjct: 50 FNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFS 109
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
+L++ Q + A + + G D LMKGLC R+ EA LL+ R
Sbjct: 110 ILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDR 169
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
G D V Y T++ LC GK +DA+Q+ PK ++ R+
Sbjct: 170 ----GFRFDEVCYGTIINGLCKIGKTRDAIQMF----------PKMKKIRV--------- 206
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
P+L Y+ + L +G + E + EM G + Y
Sbjct: 207 -----------------YPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYN 249
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + G A+++++E +V+G P V +NIL+ GLC G + A + M K
Sbjct: 250 SMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIK 309
Query: 396 QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+ G + +Y L++G C G EA +V ++M+ R+ P V +Y LI G C +
Sbjct: 310 R-GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368
Query: 456 EAVMWLEEMISQAKLPDISVWSSLV 480
EA++ L EM ++ +PD ++ L+
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLL 393
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 5/296 (1%)
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
++ L+ L +R N L Y++ S+ ++ + L+ A G++ A +L
Sbjct: 72 FNKLLSTLIKLKRYNAVVSL-YTILQ--SKPTIKPSLITFSILINAFAQLGQMGFAFSLL 128
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
IL+ G + + C G +E A SL++E + RG Y + L
Sbjct: 129 GNILKMGFQIDVRILTTLMKGLCLKGRVLE-AVSLLHEYVDRGFRFDEVCYGTIINGLCK 187
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G+ + ++ +M+ +P+L+MY + L K G+VDEA + E MV+ V
Sbjct: 188 IGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTE-MVENGIELDVY 246
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN ++ G C G AV L +M + + T+ IL+DGLC+ GR EA V+
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
M+ R + P + +YN L+ G C G EA ++M+ + LP++ + +L+ C
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYC 362
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 186/393 (47%), Gaps = 21/393 (5%)
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
L++A SLF+ + + + SF+ LLK MV + LF R + + L+
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLF-REIHKLRIPVHEFILS 111
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE-SYHILMKGLCNDRRLNEATHLLYSMFW 214
++++ C R+DL V + F+ P E ++ L++GL + ++ +A HL +
Sbjct: 112 IVVNSCCLMHRTDLGFSVLA-IHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL-- 168
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCND 273
+ + + V+Y T++ LC +G Q A +L +++ +G P +R + I + C D
Sbjct: 169 -VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTRTYTIVIDAFCKD 226
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G ++GA SL+NE + P + +YS + L + + EM +P++
Sbjct: 227 GM-LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCT 285
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL-----LKGLCDAGNSAVAVM 388
+ + + L K+G V++A E++ + KG P V YN++ L+G D M
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGV-DPDVITYNMIIDGYGLRGQVDRAREIFDSM 344
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
K + + +Y IL++G R + EA +V E+ + P + T NVL+ GL
Sbjct: 345 INKSIEPDI------ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
+G+ A + +EM+S +PD+ +L+
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 195/427 (45%), Gaps = 9/427 (2%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+N + ++I L N++ + + ++ + + CE + ++ T + + G +A
Sbjct: 140 YNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFD 199
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + Q + T+++ ++ K+ L+ A L L + I + + L+D L
Sbjct: 200 LLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL-LNEMKQKSIPPDIFTYSTLIDAL 258
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ + + +F EM YP+ +++ ++ GLC + ++ +A ++ M +KG
Sbjct: 259 CKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMI----EKGV 314
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
D++ Y ++ +G++ A +I + ++ K ++ P + I + + I+ A
Sbjct: 315 DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE-PDIISYNILINGYARQKKIDEAM 373
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E +G PS+ + + + L+ GR DEM + G P L + L
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
FK+G+V+EA+ + + + +++Y ++ GLC G A +K+ +G
Sbjct: 434 FKNGLVEEAMSHFHK-LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP-LIGLHP 491
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY ++ G C++G EA +L +M TYNV++RG K E +L
Sbjct: 492 DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFL 551
Query: 462 EEMISQA 468
EE+ ++
Sbjct: 552 EEIAGKS 558
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 181/407 (44%), Gaps = 23/407 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFN-CVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
F T IR ++ +AV LFK L + N C + T++ + K+ + A L LR
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL-LR 202
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
K ++ +++D C+ D A + EM + PD +Y L+ LC
Sbjct: 203 LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALC--- 259
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+L++ ++ ++F + ++ + +++ LC +GK++DA +I+ ++ KG+
Sbjct: 260 KLSQWENV-RTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP-- 316
Query: 261 SRRHRIDLCPCN---DGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
D+ N DG + G A+ + + + + P + SY+ + + +I
Sbjct: 317 ------DVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKID 370
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
E +V E+ KG PS+V L LF+ G A +E M+ +P + + L
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE-MLSAGHIPDLYTHCTL 429
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
L G G A+ + K+ ++ N + Y ++DGLC++G+ +A E++ +
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRRE-DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIG 488
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V TY +I G C G EA L +M L D ++ +V
Sbjct: 489 LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 177/391 (45%), Gaps = 8/391 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y +++ L + + +++ M+ S + + I + + G L+ A SL
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLL 236
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ Q + +++TL+ + K S+ E LFL + + + + N ++D LC+
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH-LNIYPNVCTFNSVIDGLCK 295
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + A + + M +G PD +Y++++ G +++ A + SM K
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI----NKSIEP 351
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI+ Y L+ Q KI +AMQ+ +I +KGLK P + L + + A++
Sbjct: 352 DIISYNILINGYARQKKIDEAMQVCREISQKGLK-PSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+E L G IP L ++ + + G + E ++ + ++ +Y A + L K
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G +D+A E+ + G P V Y ++ G C G A L+KM GC+A+
Sbjct: 471 NGKLDKAHATFEKLPLIGLH-PDVITYTAMISGYCQEGLLDEAKDMLRKMEDN-GCLADN 528
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
TY ++V G R + E LEE+ +S+
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 169/369 (45%), Gaps = 9/369 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F TL++ + E+K++ A LF + + +M+ LC+ + A + +
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M+ P+ +Y I++ C D L+ AT LL M QK DI Y TL+ ALC
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM----KQKSIPPDIFTYSTLIDALC 259
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ ++ + +++ + + + C +G+ +E A+ ++ + +G P +
Sbjct: 260 KLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK-VEDAEEIMRYMIEKGVDPDV 318
Query: 297 ASYSAMAIDLYN-EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+Y+ M ID Y G++ ++ D M K P ++ Y + + +DEA++V
Sbjct: 319 ITYN-MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCR 377
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E KG P++ N+LL GL + G + A + +M G + + T+ L+ G +
Sbjct: 378 EISQKG-LKPSIVTCNVLLHGLFELGRTKSAQNFFDEML-SAGHIPDLYTHCTLLGGYFK 435
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G EA ++ R ++ Y +I GLC GK +A E++ PD+
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495
Query: 476 WSSLVASVC 484
++++++ C
Sbjct: 496 YTAMISGYC 504
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
G VL KG + V + + LF + V +A+ + ++ + + P +Y ++
Sbjct: 126 GFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVM 185
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G++ A L+ M +Q N TY I++D C+DG A+ +L EM +S
Sbjct: 186 NGLCKKGHTQKAFDLLRLM-EQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSI 244
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TY+ LI LC + + EMI P++ ++S++ +C
Sbjct: 245 PPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLC 294
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 13/214 (6%)
Query: 277 IEGAKSLINEALIRGGIPSLASYSAM---AIDLYNEGRIVEGDKVLDEMR--TKGFWPSL 331
++ A SL + + +PS+AS+S + + + + +V + + ++R F S+
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAVMYL 390
V+ L D V+ KG +P V + L++GL AV
Sbjct: 113 VVNSCCLMH-----RTDLGFSVLAIHFKKG--IPYNEVTFTTLIRGLFAENKVKDAVHLF 165
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
KK+ ++ C N YG +++GLC+ G +A +L M S P TY ++I C
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCK 225
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G A L EM ++ PDI +S+L+ ++C
Sbjct: 226 DGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALC 259
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 24/334 (7%)
Query: 157 LMDVLCQCRRSDLALH-VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC +R+ A++ V + M GC PD SY L+KGLC +++ EA L++ M
Sbjct: 54 LLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMM--- 110
Query: 216 ISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN- 272
++ G D+V Y T++ +G + A + K+L G+ ++ CN
Sbjct: 111 -AEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPP--------NVVTCNS 161
Query: 273 --DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
DG + ++ A++++ + + +P+ +Y+++ + G+ E ++L EM G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++V Y + L K G EA E+ M++ P Y LL G GN V
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNS-MIQSGPKPDATTYGSLLHGYATEGN-LVE 279
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +K + Q G +N T+ I + C+ GR EAS +M + P + TY +I
Sbjct: 280 MNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVID 339
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
GLC IG+ +A+ +MI P+I +++L+
Sbjct: 340 GLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 178/457 (38%), Gaps = 94/457 (20%)
Query: 48 YASMIGILSESNRITEMKEVIDQM--KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y++++ L + E E+I M GD+C ++T I + + G + +A +LF
Sbjct: 87 YSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCK 146
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAA----------HILFLRSCYG----------- 144
+ + N+++ + K ++ A HI+ + Y
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206
Query: 145 WEVKSRI-------------QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHI 191
W RI + N+L+D LC+ A +F M G PD +Y
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGS 266
Query: 192 LMKGLCNDRRLNE--------------ATHLLYSM-----------------FWRISQKG 220
L+ G + L E + H +S+ F ++ Q G
Sbjct: 267 LLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLG 326
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG- 279
DIV Y T++ LC G++ DAM +++ GL + I G + G
Sbjct: 327 FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP-----NIITFTTLIHGFSMYGK 381
Query: 280 ---AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
A+ L E + RG P + ++AM L+ EG++ E K+ D M G P++V Y
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ F G V E ++++++ ++ G PT +N LL G+
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIG-LKPTAVTFNTLLDGMV-----------------S 483
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+G + +T L+D C DGR + + EML ++
Sbjct: 484 MGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKA 520
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 195/483 (40%), Gaps = 66/483 (13%)
Query: 42 RHNGPVYASMIGILSESNRITE-MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
R + + ++ L R ++ M V+ +M C ++T ++ + EA
Sbjct: 45 RADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAA 104
Query: 101 SLFKNLSQF--NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLM 158
L +++ NC S++T++ KE + A+ LF + + + + N ++
Sbjct: 105 ELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKM-LDHGIPPNVVTCNSVI 163
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
D LC+ + D A V Q+M + P+ +Y+ L+ G + + EA +L M S+
Sbjct: 164 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEM----SR 219
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G ++V Y L+ LC G +A +I +++ G K + + +G +E
Sbjct: 220 DGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVE 279
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNE---GRIVEGDKVLDEMRTKGFWPSLVMYE 335
+ + + +++ G+ S ++ +I++Y GR+ E +M+ GF P +V Y
Sbjct: 280 --MNNVKDLMVQNGMRS--NHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYT 335
Query: 336 AKLAALFKDGMVDEAL-------------------------------EVIEE---EMVKG 361
+ L K G +D+A+ E EE EM+
Sbjct: 336 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDR 395
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P V ++ ++ L G A M + G N +Y ++ G G E
Sbjct: 396 GIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR-AGAKPNVVSYNTMIHGYFIAGEVGE 454
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
++L++ML+ P T+N L+ G+ S+G + PD+ +L+
Sbjct: 455 VMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLK----------------PDVDTCKTLID 498
Query: 482 SVC 484
S C
Sbjct: 499 SCC 501
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 4/268 (1%)
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG 274
R K DI + L+ CD G + L +I++ GL+A + C
Sbjct: 3 RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG--FWPSLV 332
+ ++ G P + SYS + L E + E +++ M G P +V
Sbjct: 63 RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
Y + FK+G V +A + + + G P V N ++ GLC A L++
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHG-IPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 181
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M + + N TY L+ G G++ EA R+L+EM P V TYN+LI LC G
Sbjct: 182 MIDE-HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA MI PD + + SL+
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLL 268
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 27/344 (7%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y S+I S + TE ++ +M D + I ++G EA +F
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
++ Q ++ +LL E L E ++ L G ++S + ++ + C
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNG--MRSNHHTFSIEIYAYC 307
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+C R D A F +M G PD +Y ++ GLC RL++A S F ++ G
Sbjct: 308 KCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA----MSRFCQMIDDGLS 363
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+I+ + TL+ GK + A ++ +++ +G+ + + +G+ E A+
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTE-AQK 422
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L + G P++ SY+ M + G + E K+LD+M G P+ V + L +
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482
Query: 343 -------------------KDGMVDEALEVIEEEMVKGTFVPTV 367
+DG +++ L + E + K T+
Sbjct: 483 SMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 526
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 103/280 (36%), Gaps = 54/280 (19%)
Query: 33 EAKEKYPNYRHNGP-----VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA+E + + +GP Y S++ + + EM V D M + F+ I
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEI 303
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR------- 140
Y + G+L+EA F + Q + ++ T++ + K +L+ A F +
Sbjct: 304 YAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 363
Query: 141 -------------SCYG-WE-------------VKSRIQSLNLLMDVLCQCRRSDLALHV 173
S YG WE + + ++D L + + A +
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKL 423
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW---------------RISQ 218
F M G P+ SY+ ++ G + E LL M +
Sbjct: 424 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS 483
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
G D+ +TL+ + C+ G+I+D + + ++L K K
Sbjct: 484 MGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKT 523
>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
Length = 553
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 8/302 (2%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL-CNDRRLNEATHLLYSMFWRISQK 219
L R AL V M G PD + +L+ C RR + A ++ W ++
Sbjct: 112 LSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVR---WMVAN- 167
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D+V Y TL+ LC G++ +A+ +L+ +L +G + I C G I
Sbjct: 168 GVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGR-IHE 226
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK L+N + G PS A+Y+ + L G E D +L+E KG+ P ++ Y + +
Sbjct: 227 AKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMD 286
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G +D++ ++++ + G P+ NILL G+C + ++A A L + S ++G
Sbjct: 287 GLCKAGRIDKSFALVDKMLSNG-LQPSEVTLNILLDGVCRS-STAWAAKRLLECSAELGW 344
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
AN Y ++ LC + R+L ++ +M + P T+N+++ LC +G+ ++A+
Sbjct: 345 DANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALF 404
Query: 460 WL 461
L
Sbjct: 405 LL 406
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 273 DGEDIEGAKSLINE--ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
DG + A L++E AL+R P A ++ +A L + R VLD M G P
Sbjct: 78 DGAGADRALHLLDEMRALLRRR-PDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPD 136
Query: 331 LV-------MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+Y +L D A EV+ MV P V Y+ L+ GLC AG
Sbjct: 137 AAACTVLVGVYACRLRRF------DAAYEVVRW-MVANGVAPDVVTYSTLISGLCSAGQV 189
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A A+ L M ++ GC N TY +V C GR EA R+L M+ + P TYNV
Sbjct: 190 AEALGVLDLMLEE-GCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNV 248
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ LC +G E LEE ++ PD+ +SS + +C
Sbjct: 249 LVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLC 289
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 191/447 (42%), Gaps = 16/447 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYA-RAGQLNEAV 100
R + + ++ LS ++R V+D M D + + YA R + + A
Sbjct: 99 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 158
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + + +++TL+ + ++ EA +L L G + + + ++
Sbjct: 159 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNA--HTYTPIVH 216
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C R A + M G P +Y++L++ LC E LL + K
Sbjct: 217 AYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEES----TAK 272
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D++ Y + + LC G+I + +++K+L GL+ P I L
Sbjct: 273 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQ-PSEVTLNILLDGVCRSSTAWA 331
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK L+ + G ++ +Y+ + L +E R + K+ +M KG P+ + +
Sbjct: 332 AKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVH 391
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L K G + +AL ++ + FV TV YN L++ L +G + L +M + G
Sbjct: 392 SLCKLGRLHKALFLLRSK----EFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEG-GI 446
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY +++D LCR+ +FL A + L ++P + +IRGL G +
Sbjct: 447 APNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFP--SAFLSIIRGLIVGGMLGQLHT 504
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCN 486
+ ++ Q + ++ ++ L+ ++C N
Sbjct: 505 LIGCVLGQGFIIEVYIYQELIKALCKN 531
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 221/494 (44%), Gaps = 28/494 (5%)
Query: 4 RWPRLLTPTYLSQII-----KKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSES 58
+ PR+L+PT + I + P AL F + R + + + ++ E+
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRT--GLRVDAIIASHLLKGFCEA 161
Query: 59 NRITEMKEVIDQMKGDSCECKDSVFATAI--RTYARAGQLNEAVSLFKNLSQFN--CVNW 114
R E +++ + C VF+ I ++ G+ +A L + +++ C
Sbjct: 162 KRTDEALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPD 220
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
++NT++ KE + A LF + + + + + ++ LC+ R D A
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLF-KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M +G PD +Y+ L+ G + + EA + F + ++ D+V TL+ +
Sbjct: 280 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV----FKEMRRQSILPDVVALNTLMGS 335
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA----KSLINEALIR 290
LC GKI++A + + + KG + P + I L +G +G L + L
Sbjct: 336 LCKYGKIKEARDVFDTMAMKG-QNPDVFSYTIML----NGYATKGCLVDMTDLFDLMLGD 390
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P + +++ + N G + + + +EMR G P +V Y +AAL + G +D+A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+E + M+ VP Y+ L++G C G+ A + ++ G + +G ++
Sbjct: 451 MEKFNQ-MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSII 508
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ LC+ GR ++A + + + P YN+L+ G C +GK +A+ + M+S
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568
Query: 471 PDISVWSSLVASVC 484
P++ + +LV C
Sbjct: 569 PNVVGYGTLVNGYC 582
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 18/458 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+++FKE + + + + +++G L + +I E ++V D M +
Sbjct: 310 AVRVFKEMRRQ--SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ YA G L + LF + +FN L+K L+ A I+F
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF-NEMRDHG 426
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
VK + + ++ LC+ + D A+ F +M QG PD+ +YH L++G C L +A
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ I G DIV + +++ LC G++ DA I + + GL P + + +
Sbjct: 487 ELI----SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLH-PDAVVYNM 541
Query: 267 DLCPCNDGEDIEGA--KSL-INEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ DG + G K+L + +A++ GI P++ Y + GRI EG + EM
Sbjct: 542 LM----DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KG PS ++Y + LF+ G A +V EM + Y+I+L+GL
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPA-KVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ K++ + + + T ++ G+ + R EA + + PC TY+
Sbjct: 657 FDEAIFLFKEL-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++I L G EA M + PD + + +V
Sbjct: 716 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 170/421 (40%), Gaps = 49/421 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+S++ L ++ + + + + QM + + I Y+ GQ EAV +FK +
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + + + NTL+ + K K++ A +F +V S LN C
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+DL F M G P ++++L+K N L++A +F + G
Sbjct: 378 VDMTDL----FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM----IIFNEMRDHGVKP 429
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+V Y T++ ALC GK+ DAM+ +++ +G+ K H + C G ++ AK L
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK-AKEL 488
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
I+E + G + + ++ +L GR+++ + D G P V
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV----------- 537
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
VYN+L+ G C G A+ M G N
Sbjct: 538 -------------------------VYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNV 571
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
YG LV+G C+ GR E + EML + P YN++I GL G+ A + E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 464 M 464
M
Sbjct: 632 M 632
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 10/364 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F+ ++ + K K + A + + W + + N ++D C+ + A + +E
Sbjct: 231 TFDVVINGLCKVGKFQKAGDV-VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M + +P+ +++IL+ G C D + A +F + ++G ++V Y +L+ LC
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAK----KVFEEMQRQGLQPNVVTYNSLINGLC 345
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK+ +A+ + +K+ GLK P + + + ++ A+ ++++ RG P++
Sbjct: 346 SNGKLDEALGLQDKMSGMGLK-PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 297 ASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+++ + ID Y + GR+ + + M G P++ Y + ++G V EA + +
Sbjct: 405 ITFNTL-IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK-LA 462
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
+EM + YNIL+ LC G + AV L +M +VG + TY L+DG R
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF-EVGLNPSHLTYNALIDGYFR 521
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G A V M + + TYNVLI+G C+ GK EA L EM+ + +P+ +
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581
Query: 476 WSSL 479
+ L
Sbjct: 582 YDIL 585
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
S S + M + L EGRI + V EM + ++V ++ + L K G +A +V+
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETYGILVDGL 413
E+ G F P+V YN ++ G C AG A LK+M +K++ N T+ IL+DG
Sbjct: 253 EDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH--PNEITFNILIDGF 309
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
CRD A +V EEM + P V TYN LI GLCS GK EA+ ++M P++
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Query: 474 SVWSSLVASVC 484
+++L+ C
Sbjct: 370 VTYNALINGFC 380
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
DLAL F G S + ++ L + R+ ++ S++ + ++ G ++V
Sbjct: 176 DLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG----VVESVYKEMIRRRIGVNVVT 231
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ ++ LC GK Q A ++E + G
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFS------------------------------ 261
Query: 288 LIRGGIPSLASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
PS+ +Y+ + ID Y G++ + D +L EM K P+ + + + +D
Sbjct: 262 ------PSVITYNTI-IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
V A +V EE +G P V YN L+ GLC G A+ KMS +G N TY
Sbjct: 315 VTAAKKVFEEMQRQG-LQPNVVTYNSLINGLCSNGKLDEALGLQDKMS-GMGLKPNVVTY 372
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L++G C+ EA +L+++ R P V T+N LI G+ +A + M+
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLD 432
Query: 467 QAKLPDISVWSSLVASVC 484
P++S ++ L+ C
Sbjct: 433 TGVCPNVSTYNCLIVGFC 450
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 150/345 (43%), Gaps = 37/345 (10%)
Query: 34 AKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARA 93
AK +PN + +I +T K+V ++M+ + + + I
Sbjct: 292 AKRIHPNE----ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G+L+EA+ L +S ++N L+ K+ L+ A + L + + +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM-LDDIGKRGLAPNVIT 406
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N L+D + R D A + M G P+ +Y+ L+ G C + + EA L M
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM- 465
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
G D+V Y L+ ALC +G+ + A+++L+++ GL P + + D
Sbjct: 466 ---EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN-PSHLTYNALI----D 517
Query: 274 GEDIEG-AKSLINEALI---RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
G EG + + +N + +G ++ +Y+ + N+G++ E +++L+EM KG P
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 577
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV--RVYNI 372
+ Y +++ +EM++ F+P + +YN+
Sbjct: 578 NRTTY-----------------DILRDEMMEKGFIPDIDGHLYNV 605
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
D GF S + L +L K+G + +E + +EM++ V +++++ GLC
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIG-VVESVYKEMIRRRIGVNVVTFDVVINGLC 240
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
G A ++ M K G + TY ++DG C+ G+ +A +L+EM+ + P
Sbjct: 241 KVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNE 299
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
T+N+LI G C A EEM Q P++ ++SL+ +C N
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 195/428 (45%), Gaps = 12/428 (2%)
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
+ ++ E ++ +M G + ++ I Y + G+ EA ++F ++ +
Sbjct: 202 DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261
Query: 117 SFNTLLKEMVKESKLEAAH-ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
++ TLL + L H +L L G ++ + N+L+ + D A+ F
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV--FNILIRAYAKNETLDKAMTAFI 319
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
EM +G P+ +Y ++ LC R+ +A S F ++ +G DI+ + +L+ L
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAV----SHFSQMVSEGLSPDIITFTSLIHGL 375
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C G+ + ++ +++ +G+ + I C +G +E A ++ + G P
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE-AHDFFDQIIHVGVKPD 434
Query: 296 LASYSAMAIDLY-NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SY+ + ID Y +G++ E K+L M + G P V Y A L K+G VD+AL +
Sbjct: 435 VVSYTIL-IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL-AL 492
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EM P YNI+L GL AG A + K+ G TY I++ GLC
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS-GIQLGINTYNIVLGGLC 551
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ EA R+ + + + + V T+N++I GL +G+ +A ++ +PD
Sbjct: 552 ENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAI 611
Query: 475 VWSSLVAS 482
++ ++ S
Sbjct: 612 IYGLMIQS 619
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 29/362 (8%)
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G+ + S N++++ L + D A +F EM QG P+ +Y+ ++ GLC + ++
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191
Query: 204 EATHLLYSMF--------WRISQKGSG----EDIVIYRTLLFALCDQGKIQDAMQILEKI 251
+A +L MF R+ +K SG D+V Y L+ C G+ +A I + +
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251
Query: 252 LRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGIPSLASYSAMAIDLYN 308
+R+G + P + +R L G +GA +++ L I+ GIP + I Y
Sbjct: 252 VRRG-QNPDAYTYRTLL----HGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYA 306
Query: 309 EGRIVEGDKVLD---EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+ + DK + EMR KGF P++V Y + L K G V++A+ + MV P
Sbjct: 307 KNETL--DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ-MVSEGLSP 363
Query: 366 TVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
+ + L+ GLC G V + + +++ G N ++D LC++GR LEA
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINR--GIHPNAIFLNTIMDSLCKEGRVLEAHD 421
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++++ P V +Y +LI G C GK E++ L M+S PD +S+L+ C
Sbjct: 422 FFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYC 481
Query: 485 CN 486
N
Sbjct: 482 KN 483
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 192/463 (41%), Gaps = 49/463 (10%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN---- 97
RH + S+ +++ ++++ D+C F IR + G L+
Sbjct: 69 RHGAALAVSLFNTMAQVG--------VNKLATDAC-----TFGILIRCFCNVGLLDFALE 115
Query: 98 -------EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
AV + + +NC S+N ++ + KE +++ A+ LF G
Sbjct: 116 EESRGSRAAVHMMAD-DGYNCPPNVLSYNMVINGLFKEGEVDKAYTLF-HEMLGQGFPPN 173
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEM----------------DFQGCYPDRESYHILMK 194
I + N ++D LC+ + D A V Q+M G PD +Y +L+
Sbjct: 174 IVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLID 233
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
C R EA ++ SM R G D YRTLL +G + D +L +++
Sbjct: 234 YYCKIGRCTEARNIFDSMVRR----GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQD 289
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ + I + E ++ A + E +G P++ +Y+ + L GR+ +
Sbjct: 290 GIPL-EDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVED 348
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+M ++G P ++ + + + L G + +E + EM+ P N ++
Sbjct: 349 AVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW-KKVEKLSFEMINRGIHPNAIFLNTIM 407
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
LC G A + ++ VG + +Y IL+DG C DG+ E+ ++L M+
Sbjct: 408 DSLCKEGRVLEAHDFFDQII-HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGL 466
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
P TY+ L+ G C G+ +A+ EM S+ P+ ++
Sbjct: 467 RPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 169/419 (40%), Gaps = 77/419 (18%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ + + +M +++ M D +D VF IR YA+ L++A++ F +
Sbjct: 263 YRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322
Query: 108 Q----FNCVNWTQSFNTLLK------------EMVKESKLEAAHILFLRSCYG------W 145
Q N V +T + L K +MV E L I F +G W
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEG-LSPDIITFTSLIHGLCTIGEW 381
Query: 146 EVKSRIQS-------------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
+ ++ LN +MD LC+ R A F ++ G PD SY IL
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C D +++E+ LL R+ G D V Y LL C G++ DA+ + ++
Sbjct: 442 IDGYCLDGKMDESIKLL----GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAK----------------------------SLI 284
K +K P + + I L + A+ S +
Sbjct: 498 SKDVK-PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556
Query: 285 NEAL-IRGGIPS------LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+EAL + G+ S + +++ M + L GRI + + + G P ++Y
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ + ++G+++E+ E+ M K R N +++ L + G+ A YL K+ ++
Sbjct: 617 IQSHIEEGLLEESDELF-LSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 184/405 (45%), Gaps = 21/405 (5%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK----ESKLEAAHIL 137
+ I T GQ+ +A+S+ ++ C ++N LL+ K +E ++
Sbjct: 9 TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
C V + N+LMD +C D AL + + + GC P +Y+ ++KGLC
Sbjct: 69 RAEGCTPNNV-----TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ R +A L+ M ++ + + ++++LC +G +Q A+Q+LEK+ + G
Sbjct: 124 SAERWGDADELVTEML----RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179
Query: 258 APKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
A + I LC + +++GA L+++ G P + +Y+ + L + R V+
Sbjct: 180 ANIVTYNAIINGLC---EQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDA 236
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
++++D M G P V + + L + G++ +A+EV ++ KG P Y+ ++
Sbjct: 237 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGC-TPNSITYSTIIS 295
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GL A A+ +M + + Y +L + L D EA + + ++
Sbjct: 296 GLAKATKLDQALELFNEMGHKG--FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P YN ++ GLC GK A+ + M+S +PD + L+
Sbjct: 354 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 7/326 (2%)
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V+ + N L+ LC+ + AL V +M +GC PD +Y+IL++ C R +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
L+ M +G + V Y L+ +C +G + DA+++L + G K P + +
Sbjct: 63 ELIDLM----RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK-PSTVNYNT 117
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
L E A L+ E L P+ A+++ + L +G + + ++L++M G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
++V Y A + L + VD A+ ++ + G P + YN LLKGLC A A
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC-KPDIVTYNTLLKGLCSAARWVDA 236
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ M+ Q GC+ + T+ L+ LC+ G ++A V ++M + P TY+ +I
Sbjct: 237 EELMDNMT-QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 295
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPD 472
GL K +A+ EM + PD
Sbjct: 296 GLAKATKLDQALELFNEMGHKGFNPD 321
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 171/371 (46%), Gaps = 17/371 (4%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
E+ID M+ + C + + + G +++A+ L +NL C T ++NT+LK +
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 126 VKESKLEAAHIL---FLR-SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
+ A L LR +C E + N+++ LC+ A+ + ++M G
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEA-----TFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
C + +Y+ ++ GLC R ++ A LL M G DIV Y TLL LC +
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKM----KSYGCKPDIVTYNTLLKGLCSAARW 233
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA ++++ + + G + + C G ++ A + + +G P+ +YS
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD-AIEVFKQMPDKGCTPNSITYST 292
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
+ L ++ + ++ +EM KGF P + Y+ L D ++EA++ + + G
Sbjct: 293 IISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P +YN +L GLC G + A+ + M GC+ + TY IL++GL +G E
Sbjct: 352 -ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS-GCMPDDLTYVILIEGLAYEGYLNE 409
Query: 422 ASRVLEEMLIR 432
A +L ++ R
Sbjct: 410 ARELLIKLCSR 420
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 188/427 (44%), Gaps = 9/427 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +I L E ++ + V+D M C + + + +A+ L
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ C ++N L+ M E ++ A + LR+ K + N ++ LC
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA-LELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R A + EM + C P+ ++++++ LC L +A LL M S+ G
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM----SKHGCTA 180
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+IV Y ++ LC+Q + AM +L K+ G K + + C+ ++ A+ L
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD-AEEL 239
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
++ G +P +++ + L +G +V+ +V +M KG P+ + Y ++ L K
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+D+ALE+ E KG F P ++Y +L + L D A+ ++K+ + G +
Sbjct: 300 ATKLDQALELFNEMGHKG-FNPD-KIYQLLAECLNDDDTIEEAIQTVRKL-QDSGISPHT 356
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y ++ GLCR+G+ A ++ M+ P TY +LI GL G EA L +
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 416
Query: 464 MISQAKL 470
+ S+ L
Sbjct: 417 LCSRDVL 423
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 3/257 (1%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC++G+++DA+ +L+ +L +G AP + I L G A LI+
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGC-APDVVTYNILLEATCKGRGYRQAMELIDLM 68
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P+ +Y+ + + EG + + ++L + + G PS V Y L L
Sbjct: 69 RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A E++ E M++ P +N+++ LC G A+ L+KMSK GC AN TY
Sbjct: 129 GDADELVTE-MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH-GCTANIVTYN 186
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+++GLC A +L +M P + TYN L++GLCS + +A ++ M
Sbjct: 187 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 468 AKLPDISVWSSLVASVC 484
LPD +++L+ +C
Sbjct: 247 GCLPDNVTFNTLIGFLC 263
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
N TY L+ LC G+ +A VL++ML R P V TYN+L+ C G+ Y M L
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQAMEL 64
Query: 462 EEMI-SQAKLPDISVWSSLVASVC 484
+++ ++ P+ ++ L+ +C
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMC 88
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 27/314 (8%)
Query: 183 YPDRESYHILMKGL---CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Y RE++ LMK L C + NE+ + L + KG D+++ L+ +
Sbjct: 64 YDFRETH--LMKLLNRSCKAGKFNESLYFLECLV----NKGYTPDVILCTKLIKGFFNFK 117
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLA 297
I+ A +++E IL + + + C N IE A ++N RG +P +
Sbjct: 118 NIEKASRVME-ILESHTEPDVFAYNAVISGFCKVNR---IEAATQVLNRMKARGFLPDIV 173
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y+ M L N ++ KVLD++ P+++ Y + A +G ++EA++++EE
Sbjct: 174 TYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 233
Query: 358 MVKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ +G +P + YN +++G+C D G VA M+ + GC N TY IL+
Sbjct: 234 LARG-LLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSR------GCEPNKVTYSILISS 286
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LCR GR EA VL+ M+ + P +Y+ LI LC G+ A+ ++ MIS LPD
Sbjct: 287 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 346
Query: 473 ISVWSSLVASVCCN 486
I +++++A++C N
Sbjct: 347 IVNYNTILAALCKN 360
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
+ + N ++ C+ R + A V M +G PD +Y+I++ LCN R+L A +L
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLD 196
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
+ ++ Y L+ A +G I +AM++LE++L +GL + I
Sbjct: 197 QLLL----DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C +G EG K L+ E RG P+ +YS + L GRI E VL M K P
Sbjct: 253 CKEGMWDEGEK-LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 311
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
Y+ ++AL K+G +D A+ +++ M+ +P + YN +L LC GN+ A+
Sbjct: 312 TYSYDPLISALCKEGRLDLAIGIMDY-MISNGCLPDIVNYNTILAALCKNGNANQALEIF 370
Query: 391 KKMSKQVGCVAN 402
K+ + +GC N
Sbjct: 371 NKL-RGMGCPPN 381
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ G C R+ AT +L R+ +G DIV Y ++ +LC++ K+
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLN----RMKARGFLPDIVTYNIMIGSLCNRRKLGL 190
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L+++L P + I + I A L+ E L RG +P + +Y+A+
Sbjct: 191 ALKVLDQLLLDNC-MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ EG EG+K++ EM ++G P+ V Y +++L + G +DEA+ V++ M++
Sbjct: 250 RGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV-MIEKEL 308
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y+ L+ LC G +A+ + M GC+ + Y ++ LC++G +A
Sbjct: 309 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISN-GCLPDIVNYNTILAALCKNGNANQAL 367
Query: 424 RVLEEM 429
+ ++
Sbjct: 368 EIFNKL 373
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 144/302 (47%), Gaps = 8/302 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C+ + + +L+ + + +G PD L+KG N + + +A+ ++ I
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-----EI 128
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ + D+ Y ++ C +I+ A Q+L ++ +G P + I + +
Sbjct: 129 LESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF-LPDIVTYNIMIGSLCNRRK 187
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+ A ++++ L+ +P++ +Y+ + EG I E K+L+EM +G P + Y A
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ + K+GM DE +++ E +G P Y+IL+ LC G A+ LK M ++
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGC-EPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 306
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+ +Y L+ LC++GR A +++ M+ P + YN ++ LC G +
Sbjct: 307 -ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ 365
Query: 457 AV 458
A+
Sbjct: 366 AL 367
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLAL 171
++N ++ K +++EAA + R +K+R I + N+++ LC R+ LAL
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNR------MKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
V ++ C P +Y IL++ + +NEA LL M R G D+ Y +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR----GLLPDMYTYNAI 248
Query: 232 LFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
+ +C +G + +++ ++ +G + K + C G I+ A S++ + +
Sbjct: 249 IRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR-IDEAISVLKVMIEKE 307
Query: 292 GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
P SY + L EGR+ ++D M + G P +V Y LAAL K+G ++AL
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 367
Query: 352 EVIEE 356
E+ +
Sbjct: 368 EIFNK 372
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 26/233 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MIG L ++ +V+DQ+ D+C + I G +NEA+ L + +
Sbjct: 174 TYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 233
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLNLLMDVLC 162
+ ++N +++ M KE + L F R C +V + ++L+ LC
Sbjct: 234 LARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKV-----TYSILISSLC 288
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ R D A+ V + M + PD SY L+ LC + RL+ A ++ M G
Sbjct: 289 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI----SNGCL 344
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
DIV Y T+L ALC G A++I K+ G CP NDGE
Sbjct: 345 PDIVNYNTILAALCKNGNANQALEIFNKLRGMG-------------CPPNDGE 384
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 208/478 (43%), Gaps = 75/478 (15%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A +I KE K + + Y +I L ++ ++ + + +MK +
Sbjct: 436 AFQILKEMMRK--GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR----SC 142
I ++ +AG + +A S F + C ++ LL +K +L AH +F R +C
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM-----------DFQG-----CYPDR 186
Y V + + L+D LC+ A V++++ F+G P+
Sbjct: 554 YPNAV-----TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y L+ GLC +++++A LL +M G + ++Y L+ C GKI +A +
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAML----AAGCEPNQIVYDALIDGFCKIGKIDNAQE 664
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ ++ + G +PS+ +Y+++ +
Sbjct: 665 VFLRMTKCGY------------------------------------LPSVHTYTSLIDRM 688
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
+ +GR+ KVL EM P++V Y A + L K G +++AL ++ KG P
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC-SPN 747
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y L+ GL G + ++ K+M+ + GC N TY +L++ C G EA +L
Sbjct: 748 VVTYTALIDGLGKTGKADASLKLFKQMNSK-GCAPNYVTYRVLINHCCAAGLLDEAHLLL 806
Query: 427 EEMLIRSYWP-CVETYNVLIRGLCSIGKQYEAVM-WLEEMISQAKLPDISVWSSLVAS 482
+EM ++WP ++ Y+ ++G K++ A + LEEM S +P V+ L+ S
Sbjct: 807 DEM-KHTHWPKHLQGYHCAVQGF---SKKFIASLGLLEEMESHETVPIAPVYGMLIDS 860
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 173/422 (40%), Gaps = 27/422 (6%)
Query: 80 DSVFATA-IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHIL 137
D+V T I A NEA+S + +C+ ++ TLL +K+ + I+
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
+ G + N L+ C A +F M G P +Y+I + +C
Sbjct: 330 NMMMTEGCNPNPSL--FNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSIC 387
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYR--TLLFA--LCDQGKIQDAMQILEKILR 253
L A L + ++ ++ V+ + T F+ LC GK + A QIL++++R
Sbjct: 388 GQEELPNAE--LLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMR 445
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIV 313
KG S ++ C + +E + L E G P + +Y+ + G I
Sbjct: 446 KGFVPDTSTYTKVITFLCQ-AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIE 504
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+ DEMR+ G P++V Y A L A K + +A ++ MV P Y+ L
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR-MVDAACYPNAVTYSAL 563
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCV---------------ANGETYGILVDGLCRDGR 418
+ GLC AG A +K+ G V N TYG L+DGLC+ +
Sbjct: 564 IDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK 623
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+A +L+ ML P Y+ LI G C IGK A M LP + ++S
Sbjct: 624 VSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTS 683
Query: 479 LV 480
L+
Sbjct: 684 LI 685
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 212/511 (41%), Gaps = 44/511 (8%)
Query: 23 SPLTALKIFKEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCE 77
S L +F EA R N + Y +++ + + K +I+ M + C
Sbjct: 279 SGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCN 338
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
S+F + + Y AG A LF ++ ++N + + + +L A +L
Sbjct: 339 PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELL 398
Query: 138 FL----------RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
L SC V +++ + N LC + + A + +EM +G PD
Sbjct: 399 DLVEKVYEEMLAASC----VLNKVNTANF-SRCLCGVGKFEKAFQILKEMMRKGFVPDTS 453
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y ++ LC +++ ++ + +F + + G D+ Y L+ + C G I+ A
Sbjct: 454 TYTKVITFLCQAKKVEKS----FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+++ G +P + L + + A + + + P+ +YSA+ L
Sbjct: 510 FDEMRSVGC-SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568
Query: 308 NEGRI----------------VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL 351
G I VE D + T P++V Y A + L K V +A
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
E+++ + G P VY+ L+ G C G A +M+K G + + TY L+D
Sbjct: 629 ELLDAMLAAGC-EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK-CGYLPSVHTYTSLID 686
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ +DGR A +VL EML S P V TY +I GL +G+ +A+ L M + P
Sbjct: 687 RMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746
Query: 472 DISVWSSLVASVCCNTADLNVCRKTLEQLSS 502
++ +++L+ + T + K +Q++S
Sbjct: 747 NVVTYTALIDGL-GKTGKADASLKLFKQMNS 776
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 188/437 (43%), Gaps = 28/437 (6%)
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+++V ++M SC A R G+ +A + K + + V T ++ ++
Sbjct: 401 VEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVIT 460
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + K+E + +LF + V + + +L+D C+ + A F EM GC
Sbjct: 461 FLCQAKKVEKSFLLF-QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCS 519
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P+ +Y L+ ++L +A + +F R+ + V Y L+ LC G+IQ
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQA----HDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQK 575
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A ++ EK++ G + ND I P++ +Y A+
Sbjct: 576 ACEVYEKLI--GTSGNVESDFYFE---GNDTCTIA---------------PNVVTYGALI 615
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L ++ + ++LD M G P+ ++Y+A + K G +D A EV M K +
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR-MTKCGY 674
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
+P+V Y L+ + G +A+ L +M C N TY ++DGL + G +A
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND-SCNPNVVTYTAMIDGLSKVGEIEKAL 733
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+L M + P V TY LI GL GK ++ ++M S+ P+ + L+ +
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI-NH 792
Query: 484 CCNTADLNVCRKTLEQL 500
CC L+ L+++
Sbjct: 793 CCAAGLLDEAHLLLDEM 809
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 204/497 (41%), Gaps = 62/497 (12%)
Query: 12 TYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM 71
T+L Q K +KS L +F+E K N + Y +I ++ I + + D+M
Sbjct: 460 TFLCQAKKVEKSFL----LFQEMKRAGVN--PDVYTYTILIDSFCKAGLIEQARSWFDEM 513
Query: 72 KGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL 131
+ C + + Y ++ QL +A +F + C +++ L+ + K ++
Sbjct: 514 RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEI 573
Query: 132 EAAHILF---------LRSCYGWE------VKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+ A ++ + S + +E + + + L+D LC+ ++ A +
Sbjct: 574 QKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDA 633
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M GC P++ Y L+ G C +++ A + F R+++ G + Y +L+ +
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV----FLRMTKCGYLPSVHTYTSLIDRMF 689
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
G++ AM++L ++L P + + + +IE A +L++ +G P++
Sbjct: 690 KDGRLDLAMKVLSEMLNDSCN-PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+A+ L G+ K+ +M +KG P+ V Y + G++DEA +++E
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Query: 357 --------------------------------EMVKGTFVPTVRVYNILLKGLCDAGNSA 384
EM VP VY +L+ AG
Sbjct: 809 MKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLE 868
Query: 385 VAVMYLKKM---SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ K++ S + + G Y L+ LC + EA + EM + P + +
Sbjct: 869 TALELHKELVEVSSSLNMTSTG-MYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVF 927
Query: 442 NVLIRGLCSIGKQYEAV 458
L++GL + K EA+
Sbjct: 928 VSLVKGLIEVNKWDEAL 944
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/566 (19%), Positives = 198/566 (34%), Gaps = 125/566 (22%)
Query: 4 RWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITE 63
R+ LT + + +++ +SP ++ F A E+ Y H G Y ++ IL +
Sbjct: 94 RYREFLTDSVVVAVLRAVRSPELCVRFFLWA-ERQVGYSHTGACYDALAEILGFEDPART 152
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
+ ++ ++ D E + +R R G +EA+ L F
Sbjct: 153 AERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFG------------- 199
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+ + N L+ VL + ++ V +EM G
Sbjct: 200 -----------------------YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFC 236
Query: 184 PDRESYHILMKGLCNDRRLNEATHLL----------------------------YSMFWR 215
DR + + LC R +A ++L S R
Sbjct: 237 MDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHR 296
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
+ ++V YRTLL + + +I+ ++ +G S + + CN G
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG- 355
Query: 276 DIEGAKSLINEALIRGGIPSLASY--------------SAMAIDL----YNE-------- 309
D A L N G P +Y +A +DL Y E
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVL 415
Query: 310 ---------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
G+ + ++L EM KGF P Y + L + V+++ ++
Sbjct: 416 NKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSF-LL 474
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+EM + P V Y IL+ C AG A + +M + VGC N TY L+
Sbjct: 475 FQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM-RSVGCSPNVVTYTALLHAYL 533
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK----- 469
+ + ++A + M+ + +P TY+ LI GLC G+ +A E++I +
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593
Query: 470 -----------LPDISVWSSLVASVC 484
P++ + +L+ +C
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLC 619
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW--PSLVMYEAKLAALFKDGMVDEAL 351
PS +Y+A+ L + G++ G +V EM GF S + Y A+ AL K G +AL
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQ--ALCKVGRWADAL 259
Query: 352 EVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
++E+E F + ++ GL +A A+ +L +M + C+ N TY L+
Sbjct: 260 NMLEKE----DFNLDTVLCTQMISGLMEASLFNEAMSFLHRM-RCNSCIPNVVTYRTLLS 314
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
G + +F R++ M+ P +N L+ G C+ G A M + P
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPP 374
Query: 472 DISVWSSLVASVCC-----NTADLNVCRKTLEQLSSCS 504
++ + S+C N L++ K E++ + S
Sbjct: 375 GYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAAS 412
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEK--YPNYRHNGPVYASMIGILSESNRITE 63
P ++T T L + K +LK+FK+ K PNY Y +I + + E
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY----VTYRVLINHCCAAGLLDE 801
Query: 64 MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLK 123
++D+MK + A++ +++ + ++ L + + V + L+
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLID 859
Query: 124 EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL--------LMDVLCQCRRSDLALHVFQ 175
K +LE A L E+ SLN+ L+ LC + + A ++
Sbjct: 860 SFSKAGRLETALELH------KELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYT 913
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
EM +G PD + L+KGL + +EA L Y
Sbjct: 914 EMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYG 949
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 41/277 (14%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T T L + K A+K+ E N N Y +MI LS+ I +
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCN--PNVVTYTAMIDGLSKVGEIEKAL 733
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M+ C + I + G+ + ++ LFK ++ C ++ L+
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793
Query: 126 VKESKLEAAHIL--------FLRSCYGWEV------KSRIQSLNLL-------------- 157
L+ AH+L + + G+ K I SL LL
Sbjct: 794 CAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPV 853
Query: 158 ----MDVLCQCRRSDLALHVFQEMDFQGCYPDRES---YHILMKGLCNDRRLNEATHLLY 210
+D + R + AL + +E+ + S Y L++ LC ++ EA +
Sbjct: 854 YGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA----F 909
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+++ +++KG D++++ +L+ L + K +A+Q+
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 197/472 (41%), Gaps = 80/472 (16%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
++PT + +++KK S + AL F+ A EK ++++ Y ++I L + + + +
Sbjct: 109 VSPTLVLEVLKKLSNSGVIALSFFRWA-EKQKGFKYSTENYNALIEALGKIKQFKMIWNL 167
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
++ M+ +++ FA R YARA ++ EAV F+ + +F
Sbjct: 168 VNDMRSKGLLTQET-FALISRRYARARKVKEAVETFEKMEKFG----------------- 209
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++ + N L+D LC+ R + A VF +M + PD +
Sbjct: 210 -------------------LQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIK 250
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
SY IL++G ++ L L ++ + +G D V Y L+ A C + A+++
Sbjct: 251 SYTILLEGWGQEQNLLR----LDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVEL 306
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
H+++ C +P+ Y + L
Sbjct: 307 F---------------HKMEANKC---------------------MPTPHIYCTLINGLG 330
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+E R+ E + + + GF P Y A + + + +D+A +++E M K P
Sbjct: 331 SERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDE-MRKCGVGPQT 389
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
R Y+I+L L A + A + MS + GC + TY I+V C + R A RV +
Sbjct: 390 RTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWD 449
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
EM + P + ++ LI LC K EA + EM+ P +++S+L
Sbjct: 450 EMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNL 501
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 166/391 (42%), Gaps = 56/391 (14%)
Query: 153 SLNLLMDVLCQCRRSD-LALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLY 210
S L+++VL + S +AL F+ + Q G E+Y+ L++ L ++ +
Sbjct: 110 SPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQ--------F 161
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQG-----KIQDAMQILEKILRKGLKAPKSRRHR 265
M W + + ++ T FAL + K+++A++ EK+ + GL+ S +R
Sbjct: 162 KMIWNLVNDMRSKGLLTQET--FALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNR 219
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C +E A+ + ++ R P + SY+ + E ++ D+V EM+ +
Sbjct: 220 LLDALCK-SRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDE 278
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
GF P V Y + A K D A+E+ + M +PT +Y L+ GL
Sbjct: 279 GFEPDAVTYGILINAHCKARRYDAAVELFHK-MEANKCMPTPHIYCTLINGLGSERRLTE 337
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML-------IRSY---- 434
A+ + ++ SK G TY +V C+ R +A R+++EM R+Y
Sbjct: 338 ALQFFER-SKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 435 -------------------------WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
P V TY +++R C+ + A+ +EM ++
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Query: 470 LPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
LP + ++S+L+ S+C C+ E L
Sbjct: 457 LPGMHMFSTLINSLCYENKLDEACKYFHEML 487
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL+ F+ +K + P Y +++G +S R+ + ++D+M+ +C
Sbjct: 338 ALQFFERSKAS--GFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMR----KC-------- 383
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
T++++ +L ++K + + A+ +F
Sbjct: 384 -----------------------GVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPG 420
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + + +++ + C R D+AL V+ EM +G P + L+ LC + +L+EA
Sbjct: 421 CEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEAC 480
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ M G ++ L L D+GK QD + IL + L K
Sbjct: 481 KYFHEML----DMGIRPPAAMFSNLKQTLLDEGK-QDMVLILAQKLDK 523
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 213/487 (43%), Gaps = 27/487 (5%)
Query: 26 TALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+A K+FKEAK K N NG +Y+++I +S + +E++ +M+ D + V+ +
Sbjct: 341 SADKLFKEAKTKLDNL--NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHS 398
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ Y A + + +F+ L + S+ L+ VK K+ A + +
Sbjct: 399 MMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKA-LAVSKEMESH 457
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+K ++ ++L++ A +F++M G PDR Y++L++ C ++ A
Sbjct: 458 GIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRA 517
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ F R+ ++ +R ++ G ++ A+ L+ + R G AP +
Sbjct: 518 IRI----FERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGC-APTVMTYN 572
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ +E A S++++ I G P+ +Y+ + G I + + +++
Sbjct: 573 ALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 632
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEE----EMVKGTFVPTVRVYNILLKGLCDAG 381
G + +YE L A K G + AL V E ++ + TF+ YNIL+ G G
Sbjct: 633 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI-----YNILIDGWARRG 687
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A +K+M K+ G N T+ ++ C+ G A V++EM P V+T+
Sbjct: 688 DVWEAADLMKQM-KEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTF 746
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN---------TADLNV 492
LI+G + A+ EEM S PD + + LV S+ T L+V
Sbjct: 747 TTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSV 806
Query: 493 CRKTLEQ 499
CR+ E
Sbjct: 807 CREMFEN 813
>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 367
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 18/337 (5%)
Query: 139 LRSCYG-WEVKSR-----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHIL 192
++ C+ WE+ R + S N++ L + D + +++ M G D +Y IL
Sbjct: 41 IKDCFELWELMGREGSRSVSSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGIL 100
Query: 193 MKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
+ G C + LN++ H+L +KG D Y ++ LC + K+ A+ +L ++
Sbjct: 101 VHGFCKNGYLNKSIHVLEIA----ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMI 156
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+ G K P + + + E A ++ E P++ +YS + L R
Sbjct: 157 KNGCK-PNAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERF 215
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
E ++ EM KG PS++ Y + L D VD+AL++ + + KG F P V+++NI
Sbjct: 216 GEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKG-FKPDVQMHNI 274
Query: 373 LLKGLCDAGNS--AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
++ GLC G A+++ Y+ + C N T+ L++G +DG A + +L
Sbjct: 275 MIHGLCSVGKMQLALSLYYMNRWD----CAPNLVTHNTLMEGFYKDGDVRNALVIWARIL 330
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
P + +YN+ ++GLCS + A+++L++ +S+
Sbjct: 331 RNGLQPDIISYNITLKGLCSCNRISGAILFLQDAVSK 367
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E + R G S++S++ M L+B G++ E + + M+ G+ + Y + K+G
Sbjct: 49 ELMGREGSRSVSSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNG 108
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+++++ V+E KG + Y+ ++ GLC AV L M K GC N
Sbjct: 109 YLNKSIHVLEIAERKGGVLDAF-AYSAMINGLCKEAKLDKAVSVLNGMIKN-GCKPNAHV 166
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L++GL +F +A RVL EM + P V TY+ JI GLC + EA ++EM+
Sbjct: 167 YNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEML 226
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P + +S L+ +C
Sbjct: 227 DKGLNPSVITYSLLIKGLC 245
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 8/292 (2%)
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ D A V++E+ PD Y+ ++ G R+ + L W + +
Sbjct: 1 CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFEL-----WELMGREG 55
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
+ + + L B GK+ + + I E + G + C +G + +
Sbjct: 56 SRSVSSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGY-LNKSI 114
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
++ A +GG+ +YSAM L E ++ + VL+ M G P+ +Y A + L
Sbjct: 115 HVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGL 174
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
++A+ V+ E M F PTV Y+ J+ GLC A +K+M + G
Sbjct: 175 VGASKFEDAIRVLRE-MGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDK-GLNP 232
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ TY +L+ GLC D + +A ++ +++ + + P V+ +N++I GLCS+GK
Sbjct: 233 SVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGK 284
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 121/261 (46%), Gaps = 4/261 (1%)
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D V+Y +L G+I+D ++ E + R+G ++ S I B ++ S+
Sbjct: 24 DAVVYNAMLNGYFRVGRIKDCFELWELMGREGSRSVSS--FNIMXRGLFBNGKVDEVISI 81
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
G + +Y + G + + VL+ KG Y A + L K
Sbjct: 82 WELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGGVLDAFAYSAMINGLCK 141
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+ +D+A+ V+ M+K P VYN L+ GL A A+ L++M
Sbjct: 142 EAKLDKAVSVLNG-MIKNGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTX-HFSPTV 199
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY J++GLC+ RF EA +++EML + P V TY++LI+GLC K +A+ +
Sbjct: 200 VTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQ 259
Query: 464 MISQAKLPDISVWSSLVASVC 484
+IS+ PD+ + + ++ +C
Sbjct: 260 VISKGFKPDVQMHNIMIHGLC 280
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 55/343 (16%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQLNEAVSLFKNLSQFNCVN 113
L ++ ++ E+ + + MK +S +DS+ + + + + G LN+++ + + + V
Sbjct: 69 LFBNGKVDEVISIWELMK-ESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGGVL 127
Query: 114 WTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+++ ++ + KE+KL+ A + L K N L++ L + + A+ V
Sbjct: 128 DAFAYSAMINGLCKEAKLDKA-VSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIRV 186
Query: 174 FQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLF 233
+EM P +Y J+ GLC R EA L+ M KG ++ Y L+
Sbjct: 187 LREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEML----DKGLNPSVITYSLLIK 242
Query: 234 ALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI 293
LC K+ A+Q+ +++ KG K P + H I +I G
Sbjct: 243 GLCLDRKVDKALQLWNQVISKGFK-PDVQMHNI---------------------MIHG-- 278
Query: 294 PSLASYSAM--AIDLYNEGRIVEGDKVLDEMRTKGFW---PSLVMYEAKLAALFKDGMVD 348
L S M A+ LY R W P+LV + + +KDG V
Sbjct: 279 --LCSVGKMQLALSLYYMNR----------------WDCAPNLVTHNTLMEGFYKDGDVR 320
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
AL VI +++ P + YNI LKGLC + A+++L+
Sbjct: 321 NAL-VIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQ 362
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 170/409 (41%), Gaps = 51/409 (12%)
Query: 117 SFNTLLKEMVKESKLE---AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHV 173
+++ L+ + LE AA L L++ GW + ++N L+ LC +R A+ V
Sbjct: 92 TYSILIGRFCRMGHLEHGFAAFGLILKT--GWRMDH--IAINQLLKGLCHGKRVGEAMDV 147
Query: 174 F-QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL----------------------- 209
Q M GC PD SY IL+KGLCN++R EA LL
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 210 -----------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
Y++F + +G D+V Y T++ LC A + ++++ G K
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK- 266
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLIN---EALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + + C + I K ++ E RG P +Y ++ L GR E
Sbjct: 267 PNNYTYN---CLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D M KG P + Y + G + E + + MV+ P ++NI
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSE-MHSFLDLMVENGLSPDHHIFNIFFS 382
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G A+ KM +Q G N YG L+D LC+ GR +A +M+
Sbjct: 383 AYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + +N L+ GLC++ K A + EM+ Q P+ +++L+ ++C
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 490
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 177/408 (43%), Gaps = 49/408 (12%)
Query: 111 CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
C S++ ++ E +++ + LFL + + + ++D LC+ + D A
Sbjct: 195 CPPNVVSYSIVINGFFTEGQVDKPYNLFLEMI-DRGIPPDVVTYTTVIDGLCKAQLFDRA 253
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
VFQ+M G P+ +Y+ L+ G + + E +L M S +G D Y +
Sbjct: 254 EGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM----SARGLKPDCYTYGS 309
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN---EA 287
LL LC G+ ++A + ++RKG+K PK + I + G +GA S ++ +
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIK-PKVSTYGILI----HGYATKGALSEMHSFLDL 364
Query: 288 LIRGGIPSLASYSAMAIDLYNE-GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
++ G+ + Y + G I + + ++MR G P++V Y A + AL K G
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLC----------------DAGNSAVAVMY- 389
VD+A EV +M+ P + V+N L+ GLC D G AV +
Sbjct: 425 VDDA-EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483
Query: 390 -----------------LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIR 432
L + + VG + +Y L+ G C GR EA +V + M+
Sbjct: 484 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI 543
Query: 433 SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P TYN L+ G CS + +A EM+ + P + +++++
Sbjct: 544 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 183/432 (42%), Gaps = 47/432 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L ++ R E + D M + K S + I YA G L+E S
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL--- 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+++ E+ L H +F N+ +C
Sbjct: 363 -----------------DLMVENGLSPDHHIF----------------NIFFSAYAKCGM 389
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+ +F +M G P+ +Y L+ LC R+++A F ++ +G +IV
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE----VKFNQMINEGVTPNIV 445
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLIN 285
++ +L++ LC K + A +++ ++L +G+ P + +C CN G +EG + LI+
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGI-CPNAVFFNTLICNLCNVGRVMEG-RRLID 503
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G P SY+ + GR E +KV D M + G P+ V Y L
Sbjct: 504 LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 563
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGE 404
+D+A + E + KG P V YN +L GL S +YL ++ C +
Sbjct: 564 RIDDAYCLFREMLRKGV-TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC--DIY 620
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY I+++GLC+ EA ++ + + + + T+ ++I L G++ +A+ +
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680
Query: 465 ISQAKLPDISVW 476
+ +P++ +
Sbjct: 681 PANGLVPNVVTY 692
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 190/439 (43%), Gaps = 12/439 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++ + V QM + + + + I Y G+ E V + + +
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S ++ +LL + K + A F S +K ++ + +L+ +
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREAR-FFFDSMIRKGIKPKVSTYGILIHGYAT-KG 353
Query: 167 SDLALHVFQEMDFQ-GCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
+ +H F ++ + G PD ++I +++A +F ++ Q G ++
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM----DIFNKMRQHGLSPNV 409
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
V Y L+ ALC G++ DA +++ +G+ + + C + E A+ L+
Sbjct: 410 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV-DKWERAEELVY 468
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
E L +G P+ ++ + +L N GR++EG +++D M G P Y ++ G
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG 528
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
DEA E + + MV PT YN LL G C A A ++M ++ G T
Sbjct: 529 RTDEA-EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVT 586
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPC-VETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y ++ GL + RF EA + M I S C + TYN+++ GLC EA + +
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNM-INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645
Query: 465 ISQAKLPDISVWSSLVASV 483
S+ +I ++ ++ ++
Sbjct: 646 CSKGLQLNIITFTIMIGAL 664
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 44/325 (13%)
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS---GED 224
D AL +F E+ +++ L+ + + R + A+ L S F R+ ++ S +
Sbjct: 31 DDALKLFDELLHHARPASVRAFNHLLTAV-SRARCSSASELAVSHFNRMVRECSDKVAPN 89
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ Y L+ C G ++ IL+ G + +++ C+ E L+
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM---RTKGFWPSLVMYEAKLAAL 341
G +P SY+ + L NE R E ++L M + P++V Y +
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
F +G VD+ YN+ L+ + D G V
Sbjct: 210 FTEGQVDKP-------------------YNLFLE-MIDRGIPPDVV-------------- 235
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY ++DGLC+ F A V ++M+ + P TYN LI G SIGK E V L
Sbjct: 236 ---TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQML 292
Query: 462 EEMISQAKLPDISVWSSLVASVCCN 486
EEM ++ PD + SL+ +C N
Sbjct: 293 EEMSARGLKPDCYTYGSLLNYLCKN 317
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 41/307 (13%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I L R+ E + +ID M+ + I Y G+ +EA +F
Sbjct: 478 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF 537
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++NTLL S+++ A+ LF R V + + N ++ L Q
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF-REMLRKGVTPGVVTYNTILHGLFQ 596
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+R A ++ M G D +Y+I++ GLC ++EA + MF + KG
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA----FKMFQSLCSKGLQL 652
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+I+ + ++ AL G+ +DAM + I GL
Sbjct: 653 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGL--------------------------- 685
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+P++ +Y +A +L EG + E D + M G P+ M A + L
Sbjct: 686 ---------VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 736
Query: 344 DGMVDEA 350
G + A
Sbjct: 737 RGDISRA 743
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 193/409 (47%), Gaps = 16/409 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
F I R G+ +A ++ + ++NT++ K EAA +F ++
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF-KT 277
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+K + N + LC+ RR + A V ++ G P+ +Y+ L+ G CN
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L++A ++ + +G + Y L+ AL + +I++A +++++ KG++ P
Sbjct: 338 LDKA----FAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE-PDV 392
Query: 262 RRHRIDL---CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE-GRIVEGDK 317
+ I + C C + + A SL +E + + P++ +Y+++ ID++ + R+ E ++
Sbjct: 393 VTYNIQINGYCRCGNAKK---ALSLFDEMVEKNIRPTVETYTSL-IDVFGKRNRMSEAEE 448
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+ +G P ++M+ A + +G +D A ++++E M VP +N L++G
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKE-MDNAKVVPDEVTFNTLMQGY 507
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A L +M K+ G + +Y L+ G + G +A V +EML + P
Sbjct: 508 CRERKVEEAKKLLDEM-KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ TYN LI+G IG+ A L EM S+ PD S + ++ ++ N
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 159/380 (41%), Gaps = 73/380 (19%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM---------------- 212
+A V++EM +++I++ LC + + +A + M
Sbjct: 200 MAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259
Query: 213 ---------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
F + K D Y + + LC + +I++A +L K+L GL
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL- 318
Query: 258 APKSRRHR--IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + + ID C CN G D++ A + +E + RG + S+ +Y+ + L+ E RI E
Sbjct: 319 VPNAVTYNALIDGC-CNKG-DLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVY----- 370
+ ++ EMR KG P +V Y ++ + G +AL + +EMV+ PTV Y
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLF-DEMVEKNIRPTVETYTSLID 435
Query: 371 ------------------------------NILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
N L+ G C GN A LK+M V
Sbjct: 436 VFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD-NAKVV 494
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ T+ L+ G CR+ + EA ++L+EM R P +YN LI G G +A+
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554
Query: 461 LEEMISQAKLPDISVWSSLV 480
+EM+S P + +++L+
Sbjct: 555 FDEMLSLGFDPTLLTYNALI 574
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 15/337 (4%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+LL+ CQ R+ D AL M P E+ CN M
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTET--------CNSLLSLLLKLNKIKMA 201
Query: 214 WRISQK----GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
W + ++ IV + ++ LC +GK + A + + G+K + +
Sbjct: 202 WFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING 261
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C G+ E A + + P +Y++ L E RI E VL ++ G P
Sbjct: 262 YCLRGK-FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
+ V Y A + G +D+A +E M +G V +V YN+L+ L A
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRG-IVASVFTYNLLIHALFLEKRIEEAEDM 379
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
+K+M ++ G + TY I ++G CR G +A + +EM+ ++ P VETY LI
Sbjct: 380 IKEM-REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+ EA ++ I + LPDI ++++L+ C N
Sbjct: 439 KRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 149/335 (44%), Gaps = 8/335 (2%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A KIFK K+K N + + Y S I L + RI E V+ ++ +
Sbjct: 271 ASKIFKTMKDK--NLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I G L++A + + V ++N L+ + E ++E A + ++
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM-IKEMREKG 387
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V+ + + N+ ++ C+C + AL +F EM + P E+Y L+ R++EA
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
F + ++G DI+++ L+ C G I A Q+L+++ + + + +
Sbjct: 448 ----EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C + + +E AK L++E RG P SY+ + G + + +V DEM + G
Sbjct: 504 MQGYCRERK-VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
F P+L+ Y A + K G D A E++ E KG
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 200/476 (42%), Gaps = 81/476 (17%)
Query: 7 RLLTPTYLSQIIKKQKSP--LTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
R+L+P + +++ Q A + F+ A ++ YRH P +A ++ S + ++
Sbjct: 91 RVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQW-RYRH-APEFAQLMLSYSRAGKLRSA 148
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
V+ M+ D C S+ A+ AG++++A+ + + +
Sbjct: 149 MRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG-------------- 194
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
V+ + + N L+ LC RR A+ + M GC P
Sbjct: 195 ----------------------VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 232
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ SY+ +M LC ++R+ E LL M + G D V Y L+ L G +A
Sbjct: 233 DKISYYTVMSFLCKEKRVEEVRGLLQRMR---NDAGLFPDQVTYNVLIHGLAKHGHADEA 289
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++ L+ + +R R+D YSA+
Sbjct: 290 LEF--------LRESEGKRFRVD----------------------------EVGYSAIVH 313
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
GR+ E +++ EM +KG P +V Y + + G +D+A +++ + M K
Sbjct: 314 SFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMM-KHMYKNDCK 372
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
P + LL GLC G ++ A L K S++ + TY +++ G R+G+ E+
Sbjct: 373 PNTVTHTALLNGLCKVGKTSEAWELLNK-SEEEWWTPSDITYSVVMHGFRREGKLKESCD 431
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
V+ +ML + ++P N+LI LC GK EA ++E+ S+ ++ +++++
Sbjct: 432 VVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVI 487
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
+ L+ + GK++ AM++L + + G AP D+ CN ++ +++A
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGC-AP-------DISICNMAVNVLVVAGRVDKA 183
Query: 288 L------IRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L R G+ P + +Y+ + L R+V+ +++ M G P + Y ++
Sbjct: 184 LEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSF 243
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L K+ V+E +++ P YN+L+ GL G++ A+ +L++ S+
Sbjct: 244 LCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE-SEGKRFR 302
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
+ Y +V C +GR EA ++ EM+ + P V TY+ ++ G C IG+ +A
Sbjct: 303 VDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKM 362
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
++ M P+ ++L+ +C
Sbjct: 363 MKHMYKNDCKPNTVTHTALLNGLC 386
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 180/435 (41%), Gaps = 47/435 (10%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P +T L + K AL+ +E++ K +R + Y++++ + R+ E
Sbjct: 267 FPDQVTYNVLIHGLAKHGHADEALEFLRESEGK--RFRVDEVGYSAIVHSFCLNGRMAEA 324
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
KE++ +M C+ ++T + + R G+L++A + K++ + +C T + LL
Sbjct: 325 KEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNG 384
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+ K K A L +S W S I
Sbjct: 385 LCKVGKTSEAWELLNKSEEEWWTPSDI--------------------------------- 411
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+Y ++M G + +L E+ ++ M QKG V L+ ALC GK +A
Sbjct: 412 ---TYSVVMHGFRREGKLKESCDVVVQML----QKGFFPTTVEINLLIHALCKDGKPAEA 464
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
+E+ KG + G D+E A SL+++ + P + +Y+ +
Sbjct: 465 KDFMEQCQSKGCTINVVNFTTVIHGFSRQG-DLESALSLMDDMYLSNRHPDVVTYTVVVD 523
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L +GR+ E ++++M +G P+ V Y + + G +++ L ++E+ + +
Sbjct: 524 ALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMK 583
Query: 365 PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASR 424
YN +++ LC G A L K+ + V + +T IL++ G L+A
Sbjct: 584 SA---YNQVVEKLCAFGKLNEAYSLLYKILR-TASVRDAQTCHILMESFLNRGLGLQAYN 639
Query: 425 VLEEMLIRSYWPCVE 439
V M R+ P V+
Sbjct: 640 VACRMFRRNLIPDVK 654
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++ + + G++ +VL M+ G P + + + L G VD+ALE E M
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALE-FAERM 190
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
+ P V YN L+KGLC A V M + + Q GC + +Y ++ LC++ R
Sbjct: 191 RRVGVEPDVYTYNCLIKGLCGA-RRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 249
Query: 419 FLEASRVLEEMLIRS-YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
E +L+ M + +P TYNVLI GL G EA+ +L E + D +S
Sbjct: 250 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 309
Query: 478 SLVASVCCN 486
++V S C N
Sbjct: 310 AIVHSFCLN 318
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 227/526 (43%), Gaps = 47/526 (8%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN---YRHNGPVYASMIGILSESNRITEMK 65
L ++++I +Q +P AL F A PN Y H P Y ++ +L + I+
Sbjct: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS--- 109
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ + +S + D + I+ Y G + A+ F Q S+N+LL +
Sbjct: 110 -IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
V+ + ++ A F + V + + ++ C+ + A VF M + P+
Sbjct: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI----VIYRTLLFALCDQGKI 241
+Y+ ++ G C + A + M SGED V Y TL+ C +G++
Sbjct: 226 LLAYNTMINGFCKKGDMESARLVFDRMM-------SGEDCLPNHVTYTTLIDGYCKKGEL 278
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
++A + + +++ +G + + + + C +G ++ AK L+ + + G +++++ +
Sbjct: 279 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR-VDEAKMLMAKMRLNGFKDNVSTHKS 337
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M L G+ + L + P + YE + K G DEA+ +++E +G
Sbjct: 338 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 397
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC-RDGRFL 420
PTV +N + + L + G A++ LK+M Q+ C+ N +Y ++ GLC GR
Sbjct: 398 -LKPTVFSFNAVFRILVENGELDRAILLLKQMP-QMDCLPNFVSYNTIICGLCMAKGRMQ 455
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ +++ M+ + Y+ L++G C G + EM+++ + + +S LV
Sbjct: 456 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLV 515
Query: 481 ASVC-----------------CNTADLNVCRKTLEQL-----SSCS 504
+C C D++ R+ L+Q SSCS
Sbjct: 516 KQLCAKGKVTEAEKLFDTCSRCPAVDVDSYRRVLDQQICIRSSSCS 561
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 11/357 (3%)
Query: 118 FNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
F++L K + +K A HI L +G+ +QS N + L + RR+D+AL ++E
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFS--PTVQSCNAFLSSLLRLRRADIALAFYRE 214
Query: 177 MDFQGCY-PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFAL 235
+ + C P+ + +++++ C + + + M ++ G ++V + TL+
Sbjct: 215 IRRRSCVSPNVYTLNMIIRAYCMLGEVQKG----FDMLEKMMDMGLSPNVVSFNTLISGY 270
Query: 236 CDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPS 295
C++G A+++ ++ G++ + + C + + A + NE + PS
Sbjct: 271 CNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKE-RKLHEANRVFNEMKVANVDPS 329
Query: 296 LASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIE 355
+ +Y+ + G G +V +EM G ++ Y A + L KDG +A +
Sbjct: 330 VVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVR 389
Query: 356 EEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCR 415
E + K VP ++ L+ G C NS A + + M + GC NG+T+ +L+ C+
Sbjct: 390 E-LDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRS-GCSPNGQTFQMLISAFCK 447
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ F A +VL +ML R P + T + L GLC GK A+ EM + LPD
Sbjct: 448 NEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G V + +++E+ M G P V +N L+ G C+ G +A + +K + + G N
Sbjct: 239 GEVQKGFDMLEKMMDMG-LSPNVVSFNTLISGYCNKGLFGLA-LKVKSLMVENGVQPNVV 296
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
T+ L++G C++ + EA+RV EM + + P V TYN L+ G +G V EEM
Sbjct: 297 TFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEM 356
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ DI +++L+ +C
Sbjct: 357 MRNGLKADILTYNALILGLC 376
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + +G +L++M G P++V + ++ G+ AL+V + MV+ P V
Sbjct: 239 GEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKV-KSLMVENGVQPNVVT 297
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE----TYGILVDGLCRDGRFLEASRV 425
+N L+ G C A +M VAN + TY L++G + G RV
Sbjct: 298 FNTLINGFCKERKLHEANRVFNEMK-----VANVDPSVVTYNTLLNGYGQVGDSEMGVRV 352
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EEM+ + TYN LI GLC GK +A ++ E+ + +P+ S +S+L+ C
Sbjct: 353 YEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQC 411
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 52/312 (16%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR Y G++ + + + + SFNTL+ G+
Sbjct: 232 IRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLIS--------------------GY- 270
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
C LAL V M G P+ +++ L+ G C +R+L+EA
Sbjct: 271 ---------------CNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEAN 315
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ F + +V Y TLL G + +++ E+++R GLKA + +
Sbjct: 316 RV----FNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNAL 371
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK-----VLDE 321
L C DG+ + A + E +P+ +++SA+ G+ V + +
Sbjct: 372 ILGLCKDGK-TKKAAGFVRELDKENLVPNASTFSALIT-----GQCVRNNSERAFLIYRS 425
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M G P+ ++ ++A K+ D A++V+ +M+ P + + L GLC G
Sbjct: 426 MVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVL-RDMLGRLMSPDLSTMSELCDGLCRCG 484
Query: 382 NSAVAVMYLKKM 393
+ +A+ +M
Sbjct: 485 KNQLALALCSEM 496
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 14/251 (5%)
Query: 83 FATAIRTYARAGQLNEAVS----LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF 138
F T I Y G A+ + +N Q N V +FNTL+ KE KL A+ +F
Sbjct: 263 FNTLISGYCNKGLFGLALKVKSLMVENGVQPNVV----TFNTLINGFCKERKLHEANRVF 318
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
V + + N L++ Q S++ + V++EM G D +Y+ L+ GLC
Sbjct: 319 -NEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCK 377
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
D + +A + ++ + + L+ C + + A I ++R G +
Sbjct: 378 DGKTKKAA----GFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGC-S 432
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + ++ + ED +GA ++ + L R P L++ S + L G+ +
Sbjct: 433 PNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALAL 492
Query: 319 LDEMRTKGFWP 329
EM + P
Sbjct: 493 CSEMEVRRLLP 503
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
M + F PTV+ N L L + +A+ + +++ ++ N T +++ C G
Sbjct: 180 MKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLG 239
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ +LE+M+ P V ++N LI G C+ G A+ M+ P++ ++
Sbjct: 240 EVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFN 299
Query: 478 SLVASVC 484
+L+ C
Sbjct: 300 TLINGFC 306
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 15/407 (3%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE-AAHILFLR 140
++ + I Y +AG +++AV +F +SQ NC ++ +N + ++ S+ + A H
Sbjct: 11 IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
G+ + S S + LC+ + + +M+ C PD +++I + L +
Sbjct: 71 GTRGFSLSSFTYS--RFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
R++ L +F +I + G D+V Y ++ +C K A+Q ++ KG
Sbjct: 129 RID----LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDN 184
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP-SLASYSAMAIDLYNEGRIVEGDKVL 319
I + C DG ++ A LI + + G + S Y+A+ GRI + +
Sbjct: 185 KACGAIVVGLC-DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIK 243
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
MR G P LV Y L + M+D+A +++ + M + P V YN LLKG+C
Sbjct: 244 SFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLL-KLMERSGIEPDVYSYNQLLKGICK 302
Query: 380 AG--NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ A +M K K + V +Y ++ C+ G A ++ EEM + P
Sbjct: 303 GNCPDKAYLLMTNKMWPKGLCDVV---SYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPD 359
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V T+ + I+ G A L++M PD +++++ +C
Sbjct: 360 VVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLC 406
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 205/485 (42%), Gaps = 35/485 (7%)
Query: 13 YLSQIIKKQKSPLT--ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQ 70
Y S+I K+ L A+++F E + N R Y IG+L +R Q
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQS--NCRVFSIDYNRFIGVLINHSRFDLANHYYSQ 69
Query: 71 MKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESK 130
M ++ I + L ++ NC+ +FN L + E +
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 131 LEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH 190
++ A +F + K + + +++ +C+ ++ D A+ +++M +G PD ++
Sbjct: 130 IDLALEVFEKIVKNGR-KPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188
Query: 191 ILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILE 249
++ GLC+ R+++ L Y + + + G + ++Y L+ C G+I D Q ++
Sbjct: 189 AIVVGLCDGRKVD----LAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRI-DKAQAIK 243
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+R+ P + + L D ++ AK L+ L S + D+Y+
Sbjct: 244 SFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLL----------KLMERSGIEPDVYSY 293
Query: 310 GRIVEG-------DKVLDEMRTKGFWP----SLVMYEAKLAALFKDGMVDEALEVIEEEM 358
++++G DK M K WP +V Y + A K G A ++ EE
Sbjct: 294 NQLLKGICKGNCPDKAYLLMTNK-MWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMG 352
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
KG P V + I +K G+ +A L +M+ ++G + Y ++D LC+ G+
Sbjct: 353 QKGI-PPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT-EMGLSPDCIFYTTIIDHLCKSGK 410
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
A + +M+ + P V ++N LI G C + EA+ EEM ++ PD +
Sbjct: 411 VEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKL 470
Query: 479 LVASV 483
++ +
Sbjct: 471 IIGGL 475
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + T ++ ++M F I+ + G N A L ++
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387
Query: 108 QF----NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE--VKSRIQSLNLLMDVL 161
+ +C+ +T T++ + K K+E AH +F C E + + S N L++
Sbjct: 388 EMGLSPDCIFYT----TIIDHLCKSGKVEMAHSIF---CDMVEQGISPDVISFNALINGF 440
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW-RISQKG 220
C+C R A+H+++EM +G YPD +Y +++ GL +++++ A M W ++ KG
Sbjct: 441 CKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIAC-----MVWGQMMDKG 495
Query: 221 SGEDIVIYRTLL 232
D I +TL+
Sbjct: 496 FTLDRAIAQTLI 507
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
++Y +++A K G++D+A++V +E V ++ YN + L + +A Y
Sbjct: 10 LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSID-YNRFIGVLINHSRFDLANHYYS 68
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G + TY + GLC+ F +L +M + P + +N+ + L
Sbjct: 69 QMGTR-GFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVE 127
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
G+ A+ E+++ + PD+ ++ ++ VC
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVC 160
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 175/404 (43%), Gaps = 22/404 (5%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + + A S+F N+ + + NTL+K + +++ A + F
Sbjct: 99 INCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA-LYFHDQLVAQG 157
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ S L++ LC+ + + ++++ PD Y+ ++ LC ++ L +A
Sbjct: 158 FQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 217
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
+ M KG D+V Y TL+ C G +++A +L ++ K +
Sbjct: 218 DVYSEMIV----KGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINP-------- 265
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-------PSLASYSAMAIDLYNEGRIVEGDKVL 319
++C N D + + EA I + P + +Y+++ + + V
Sbjct: 266 NVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVF 325
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
M +G P + Y + L K MVDEA+ + EE M +P + YN L+ GLC
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEE-MKHKNMIPDIVTYNSLIDGLCK 384
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+ A+ K+M +Q G + +Y IL+DGLC+ GR +A + + +L + Y V
Sbjct: 385 NHHLERAIALCKRMKEQ-GIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVH 443
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
Y VLI LC G EA+ +M + +PD + ++ ++
Sbjct: 444 AYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL 487
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 12/372 (3%)
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
T FN +L +V LF + + + +L++L++ C LA VF
Sbjct: 57 TFHFNNILSSLVNNKHYPTVISLF-KQFEPNGITPDLCTLSILINCFCHQAHITLAFSVF 115
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+ +G +P+ + + L+KGLC + +A LY ++Q G D V Y TL+
Sbjct: 116 ANILKRGFHPNAITLNTLIKGLCFRGEIKKA---LYFHDQLVAQ-GFQLDQVSYGTLING 171
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC G+ + ++L K+ +K + I C + + + A + +E +++G P
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN-KLLGDACDVYSEMIVKGISP 230
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + G + E +L+EM+ K P++ + + AL K+G + EA +++
Sbjct: 231 DVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA-KIL 289
Query: 355 EEEMVKGTFVPTVRVYNILLKG--LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
M+K P V YN L+ G L D A V Y Q G + + Y +++G
Sbjct: 290 LAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY---SMAQRGVTPDVQCYTNMING 346
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+ EA + EEM ++ P + TYN LI GLC A+ + M Q PD
Sbjct: 347 LCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPD 406
Query: 473 ISVWSSLVASVC 484
+ ++ L+ +C
Sbjct: 407 VYSYTILLDGLC 418
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 166/358 (46%), Gaps = 16/358 (4%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
S+ TL+ + K + +A L LR G VK + N +++ LC+ + A V+ E
Sbjct: 164 SYGTLINGLCKTGETKAVARL-LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSE 222
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M +G PD +Y L+ G C L EA +S+ + K ++ + L+ AL
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEA----FSLLNEMKLKNINPNVCTFNILIDALS 278
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLINEALIRGG 292
+GK+++A +IL ++ K P + + DG ++++ AK + RG
Sbjct: 279 KEGKMKEA-KILLAVMMKACIKPDVFTYNSLI----DGYFLVDEVKHAKYVFYSMAQRGV 333
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P + Y+ M L + E + +EM+ K P +V Y + + L K+ ++ A+
Sbjct: 334 TPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 393
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ + +G P V Y ILL GLC +G A +++ + G N Y +L++
Sbjct: 394 LCKRMKEQG-IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK-GYHLNVHAYTVLINR 451
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
LC+ G F EA + +M + P T++++IR L + +A L EMI++ L
Sbjct: 452 LCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 149/350 (42%), Gaps = 12/350 (3%)
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
N ++ L + + +F++ + G PD + IL+ C+ + L +S+F
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHIT----LAFSVF 115
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
I ++G + + TL+ LC +G+I+ A+ ++++ +G + + + C
Sbjct: 116 ANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKT 175
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
GE + L+ + P + Y+ + L + + V EM KG P +V
Sbjct: 176 GET-KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y + G + EA ++ E +K P V +NIL+ L G A + L M
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKN-INPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Query: 394 SKQVGCV-ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
K C+ + TY L+DG A V M R P V+ Y +I GLC
Sbjct: 294 MK--ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTA---DLNVCRKTLEQ 499
EA+ EEM + +PDI ++SL+ +C N + +C++ EQ
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQ 401
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 14/319 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L ++ + + +V +M + T I + G L EA SL +
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRSCYGWEVKSRIQSLNLLMDVLCQ 163
N +FN L+ + KE K++ A IL +++C +K + + N L+D
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKAC----IKPDVFTYNSLIDGYFL 314
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A +VF M +G PD + Y ++ GLC + ++EA S+F + K
Sbjct: 315 VDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAM----SLFEEMKHKNMIP 370
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKS 282
DIV Y +L+ LC ++ A+ + +++ +G++ P + I L C G +E AK
Sbjct: 371 DIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ-PDVYSYTILLDGLCKSGR-LEDAKE 428
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ L +G ++ +Y+ + L G E + +M KG P V ++ + ALF
Sbjct: 429 IFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALF 488
Query: 343 KDGMVDEALEVIEEEMVKG 361
+ D+A +++ E + +G
Sbjct: 489 EKDENDKAEKILREMIARG 507
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 212/491 (43%), Gaps = 46/491 (9%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
++ FK A K +++H+ Y ++I L ES + EM I M C + ++ +
Sbjct: 108 IQFFKWAG-KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEIL 166
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ +A +N+A+S+F + C +NTL+ ++ E E H L+ C
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNC 226
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVF--------------------------------- 174
+ + L+ + R D A +F
Sbjct: 227 SPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALR 286
Query: 175 --QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
+EM +GC P +Y L+KGL R+++A YS+F+ + + G D+V+ L+
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDA----YSLFFNMLKDGCKPDVVLINNLI 342
Query: 233 FALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRG 291
L G+++DA+++ K+ L+ AP + + + + +L E +
Sbjct: 343 NILGRAGRLEDALKLFGKM--DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 292 GI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
GI PS +Y+ + R+ + +L+EM KGF P Y + + +L + + A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E+ +E + + + RVY +++K + G + AV + K +GC + TY L+
Sbjct: 461 NELFQE-LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEK-LGCSPDVYTYNALM 518
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G+ R G EA ++ M P ++++N+++ GL G A+ +M +
Sbjct: 519 SGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIM 578
Query: 471 PDISVWSSLVA 481
PD ++++++
Sbjct: 579 PDAVSYNTILS 589
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 7/312 (2%)
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
Q+M C + ++K L + +N+A S+F++I + +Y TL+
Sbjct: 146 TIQDMIRSPCSVGPAEWSEILKILGKAKMVNKA----LSVFYQIKGRKCNPTATVYNTLI 201
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
L +G + ++ +I +G +P + + + E + A L +E G
Sbjct: 202 LMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGL 261
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P+ Y+ + + ++ ++++EM+ KG P++ Y + L K G VD+A
Sbjct: 262 HPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYS 321
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ M+K P V + N L+ L AG A+ KM + C N TY ++
Sbjct: 322 LFFN-MLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMD-SLQCAPNVVTYNTVIKA 379
Query: 413 LCRD-GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLP 471
+ EA+ E+M P TY +LI G C + +A++ LEEM + P
Sbjct: 380 IFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Query: 472 DISVWSSLVASV 483
+ + SL+ S+
Sbjct: 440 CPAAYCSLIDSL 451
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 122/334 (36%), Gaps = 35/334 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I L + R+ + + M D C+ + I RAG+L +A+ LF +
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++NT++K + + + L+ + + +L+D C+ R
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL----------------- 209
+ AL + +EMD +G P +Y L+ L +R A L
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAV 481
Query: 210 --------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+F + G D+ Y L+ + G I +A ++ + G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
P + H I L + A + + +P SY+ + L G
Sbjct: 542 C-TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
K++ EM+ KGF + Y + L A+ G VDE
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAV---GKVDE 631
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 209/494 (42%), Gaps = 66/494 (13%)
Query: 11 PTYLSQIIKKQKS-PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN---------- 59
P +L +++ K PLTAL+ F+ EK PN+ + + +++ IL+++
Sbjct: 51 PEFLLRVLNSVKHRPLTALRFFRWV-EKQPNFHRSETAFVAILDILAKNGFMKPAYWVME 109
Query: 60 RITEMK---EVIDQMKGDSC----ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCV 112
+ E+K V+D + G C E + I+ +A+ L + + +F + +
Sbjct: 110 KAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLL 169
Query: 113 NWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
++ N +LK + +S + ++ + C +++ I + N +MD C+ A
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC---QIRPTIVTFNTMMDSRCKEGEVGRA 226
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ V M GC P+ SY++L+ GL SG
Sbjct: 227 VEVLDVMRMFGCDPNDVSYNVLVNGL------------------------SG-------- 254
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
+G+ A +++E++ GLK + + C E E A L E L R
Sbjct: 255 -------KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK-EMFEEANDLRREMLGR 306
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G +P++ +Y+ + L GR+ + + LD M + P LV Y + + G EA
Sbjct: 307 GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
L ++ E+ VP+V YN L+ G C GN +A M K G + T+ ILV
Sbjct: 367 L-LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH-GLCPDVVTFTILV 424
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
G C+ G A + +EML R P Y I G +G +A EEM ++
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484
Query: 471 PDISVWSSLVASVC 484
PD+ ++ L+ +C
Sbjct: 485 PDLITYNVLINGLC 498
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 199/437 (45%), Gaps = 14/437 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSV--FATAIRTYARAGQLNEAVSLFKNLSQ 108
++ +L + + + E++EV M C+ + ++ F T + + + G++ AV + +
Sbjct: 178 VLKLLKDKSMVNEVEEVYSVMI--KCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRM 235
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWEVKSRIQSLNLLMDVLCQCRRS 167
F C S+N L+ + + + + A L + S G +V + + N L+ C+
Sbjct: 236 FGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSA--HTYNPLIRGFCKKEMF 293
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ A + +EM +G P +Y+ +M LC R+++A L M + D+V
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMV----NEDLMPDLVS 349
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL++ G +A+ + ++ K L + + C G +++ AK + ++
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG-NLDIAKGMKDDM 408
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G P + +++ + G + ++ DEM ++G P + Y ++ K G
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
+A + EE +G F P + YN+L+ GLC GN A ++KM + G V + TY
Sbjct: 469 SKAFGMKEEMKAEG-FPPDLITYNVLINGLCKLGNFDDANELVQKMRLE-GIVPDHVTYT 526
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ G +A V +ML + P V TY VLI G+ A + +EM +
Sbjct: 527 SIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586
Query: 468 AKLPDISVWSSLVASVC 484
P++ +++L+ +C
Sbjct: 587 GVSPNVITYNALIYGLC 603
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 174/415 (41%), Gaps = 8/415 (1%)
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
EV+D M+ C+ D + + + G+ + A L + +S ++N L++
Sbjct: 228 EVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGF 287
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K+ E A+ L R G + + N +M LC+ R A M + PD
Sbjct: 288 CKKEMFEEANDL-RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPD 346
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
SY+ L+ G R N A LL +F + K +V Y TL+ C G + A
Sbjct: 347 LVSYNTLIYGYS--RLGNFAEALL--LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ + +++ GL P I + ++ AK L +E L RG P +Y+ +
Sbjct: 403 GMKDDMIKHGL-CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G + + +EM+ +GF P L+ Y + L K G D+A E++++ ++G VP
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG-IVP 520
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
Y ++ +G A M K+ G + TY +L+ GR A +
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKK-GIHPSVVTYTVLIHSYAVRGRLDFAKKY 579
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+EM + P V TYN LI GLC A EM S+ P+ ++ L+
Sbjct: 580 FDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 170/422 (40%), Gaps = 54/422 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L R+++ + +D M + + T I Y+R G EA+ LF L
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
N V ++NTL+ D C+
Sbjct: 375 SKNLVPSVVTYNTLI------------------------------------DGGCRTGNL 398
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D+A + +M G PD ++ IL++G C L A L M R G D +
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR----GLKPDCIA 454
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKSLI 284
Y T + G A + E++ +G P + + LC + +D A L+
Sbjct: 455 YTTRIVGELKLGNPSKAFGMKEEMKAEGF-PPDLITYNVLINGLCKLGNFDD---ANELV 510
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
+ + G +P +Y+++ G + + ++V +M KG PS+V Y + +
Sbjct: 511 QKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVR 570
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
G +D A + +E KG P V YN L+ GLC VA +M + G N
Sbjct: 571 GRLDFAKKYFDEMQDKGV-SPNVITYNALIYGLCKENMMDVAYNLFAEMESK-GVSPNKY 628
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE--AVMWLE 462
TY IL++ + +A ++ ++ML R P T++ L++ L K Y+ AV+ LE
Sbjct: 629 TYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL---SKDYKLLAVLRLE 685
Query: 463 EM 464
+
Sbjct: 686 NL 687
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 267 DLCPCNDGEDIEGAKSLINEA------LIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVL 319
D+ CN + KS++NE +I+ I P++ +++ M EG + +VL
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVL 230
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
D MR G P+ V Y + L G D A E+IE+ + G V + YN L++G C
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKV-SAHTYNPLIRGFCK 289
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A ++M + G + TY ++ LCR GR +A R L+ M+ P +
Sbjct: 290 KEMFEEANDLRREMLGR-GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV 348
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCR 494
+YN LI G +G EA++ E+ S+ +P + +++L+ C T +L++ +
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDG-GCRTGNLDIAK 402
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 193/473 (40%), Gaps = 48/473 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ +I +LSE N + ++++K F I YA+ G +AV F +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+F+C ++N +L+ M++E + + +LMD L + R+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F +M +G P+R +Y IL+ GLC ++A L Y M G+ D V
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM----QTSGNYPDSVA 270
Query: 228 YRTLLFALCDQGKIQDAMQILE-----------------------------------KIL 252
+ LL C G++ +A ++L +L
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 253 RKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
+K +K P + I + + IE A L++ +G P Y+A+ L G +
Sbjct: 331 KKNIK-PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
EG + EM +P + + ++ ++G+V EA E+ E + K P+V +N
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE-IEKSGCSPSVATFNA 448
Query: 373 LLKGLCDAGNSAVAVMYLKKMSKQVGCVAN-----GETYGILVDGLCRDGRFLEASRVLE 427
L+ GLC +G A + L KM +VG A+ + D + G L+A R L
Sbjct: 449 LIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA 506
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P + +YNVLI G C G A+ L + + PD +++L+
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A ++ NE L P+L ++ + LY +GR + K+ D+M +G P+ V Y ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L + G D+A ++ E G + P +N LL G C G A L+ K G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFEKD-GF 299
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
V Y L+DGL R R+ +A + ML ++ P + Y +LI+GL GK +A+
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 460 WLEEMISQAKLPDISVWSSLVASVC 484
L M S+ PD +++++ ++C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALC 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 166/422 (39%), Gaps = 62/422 (14%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y+S+I L + R T+ E+ M + + ++ I+ ++AG++ +A+ L ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
T +N ++K + LE L L E +S + + + CR
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS---ETESFPDACTHTILICSMCRNG 422
Query: 168 DL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY--------SMFWRIS 217
+ A +F E++ GC P +++ L+ GLC L EA LL+ S+F R+S
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
G+ + T++ + G I LKA + H D
Sbjct: 483 HSGNRS----FDTMV----ESGSI--------------LKAYRDLAHFAD---------- 510
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
G P + SY+ + G I K+L+ ++ KG P V Y
Sbjct: 511 ------------TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ L + G +EA ++ K F + VY L+ C VA K K++
Sbjct: 559 INGLHRVGREEEAFKLF---YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKI 615
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C+ + I + ++G A R L E+ R + Y + + GLC G+ +EA
Sbjct: 616 SCLDDETANEI--EQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA 673
Query: 458 VM 459
+M
Sbjct: 674 LM 675
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+ L+E+++ G + ++A K GM ++A+E M + P V YN++L+
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGR-MKEFDCRPDVFTYNVILRV 171
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
+ + + + C N T+GIL+DGL + GR +A ++ ++M R P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY +LI GLC G +A EM + PD ++L+ C
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 140/354 (39%), Gaps = 38/354 (10%)
Query: 61 ITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA------------VSLFKNLSQ 108
+ E +E+ +++ C + F I ++G+L EA SLF LS
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 109 FNCVNWTQSFNTLLKE-MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ +SF+T+++ + ++ + AH S I S N+L++ C+
Sbjct: 484 ----SGNRSFDTMVESGSILKAYRDLAHFADTGS------SPDIVSYNVLINGFCRAGDI 533
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D AL + + +G PD +Y+ L+ GL R EA L Y ++ +
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY------AKDDFRHSPAV 587
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
YR+L+ C + K+ A + K L+K + I+ C +GE + LI E
Sbjct: 588 YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQC-FKEGETERALRRLI-EL 645
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW---PSLVMYEAKLAALFKD 344
R +L Y+ I L GR E V +R K PS V + L K
Sbjct: 646 DTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKL---IHGLCKR 702
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+D A+EV + F RV N LL L ++ V L ++ G
Sbjct: 703 EQLDAAIEVFLYTL-DNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAG 755
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 209/475 (44%), Gaps = 52/475 (10%)
Query: 51 MIGIL--SESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL-S 107
+IG++ S I+ +EV D M F + Y G+L +A+ + + + S
Sbjct: 173 LIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS 232
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+F ++NT+LK M K+ +L L L V +R+ NL V C+
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL---VYGYCKLG 289
Query: 168 DL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
L A + + M PD +Y+IL+ GLCN + E L+ +M Q D+
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP----DV 345
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL---CPCNDGE------- 275
V Y TL+ + G +A +++E++ G+KA + H I L C E
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT-HNISLKWLCKEEKREAVTRKVK 404
Query: 276 --------------------------DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
D+ GA ++ E +G + + + + L E
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
++ E +L+ +GF V Y + F++ V++ALE+ +E M K PTV
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE-MKKVKITPTVST 523
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N L+ GLC G + +A+ +++ + G + + T+ ++ G C++GR +A E
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ S+ P T N+L+ GLC G +A+ + +I + ++ D +++++++ C
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFC 636
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 191/447 (42%), Gaps = 45/447 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ +S+ R++++KE++ MK + + + Y + G L EA + + +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q N + ++N L+ + + + + + +++ + + N L+D +
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREG-LELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
S A + ++M+ G ++ +++I +K LC + + T + + + G DIV
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL---VDMHGFSPDIV 417
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y TL+ A G + A++++ ++ +KG+K + I C + ++ A +L+N
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE-RKLDEAHNLLNS 476
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
A RG I +Y + + + E ++ + ++ DEM+ P++ + + + L G
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 347 VDEALEVIEE----------------------------------EMVKGTFVPTVRVYNI 372
+ A+E +E E +K +F P NI
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 373 LLKGLCDAGNSAVAVMYLKKM--SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEML 430
LL GLC G + A+ + + ++V V TY ++ C+D + EA +L EM
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREVDTV----TYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ P TYN I L GK E
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 26/363 (7%)
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
++KE++D M G S + + T I+ Y + G L+ A+ + + + Q T + NT+L
Sbjct: 402 KVKELVD-MHGFSPDI--VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+ KE KL+ AH L + + + L+M + + + AL ++ EM
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE-EKVEKALEMWDEMKKVKI 517
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
P +++ L+ GLC+ + T L F +++ G D + +++ C +G+++
Sbjct: 518 TPTVSTFNSLIGGLCHHGK----TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
A + + ++ K P + I L C +G E A + N LI +Y+
Sbjct: 574 KAFEFYNESIKHSFK-PDNYTCNILLNGLCKEGM-TEKALNFFN-TLIEEREVDTVTYNT 630
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M + ++ E +L EM KG P Y + ++ L +DG + E E++++ G
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK--FSG 688
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
F R + + N A + K +A Y ++D LC GR E
Sbjct: 689 KFGSMKRDLQVETE-----KNPATSE---SKEELNTEAIA----YSDVIDELCSRGRLKE 736
Query: 422 ASR 424
SR
Sbjct: 737 HSR 739
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
++ L A +GK A+QI +K++R LK +L CN
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKP--------NLLTCN-------------- 170
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
L+ G + +S+S I +V D+M G ++ + + +G
Sbjct: 171 TLLIGLVRYPSSFS-----------ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+++AL ++E + + P YN +LK + G + L M K G V N TY
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN-GLVPNRVTY 278
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LV G C+ G EA +++E M + P + TYN+LI GLC+ G E + ++ M S
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 467 QAKLPDISVWSSLVASVCCNTADLNV-CRKTLEQLSS 502
PD+ +++L+ C L++ RK +EQ+ +
Sbjct: 339 LKLQPDVVTYNTLIDG--CFELGLSLEARKLMEQMEN 373
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 4/206 (1%)
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
SL++ L PS A + +EG+ ++ +M P+L+ L L
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGL 176
Query: 342 FK---DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
+ + A EV ++ MVK V+ +N+L+ G C G A+ L++M +
Sbjct: 177 VRYPSSFSISSAREVFDD-MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ TY ++ + + GR + +L +M P TYN L+ G C +G EA
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
+E M LPD+ ++ L+ +C
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLC 321
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I ++ + E+ D+MK S F + I G+ A+ F L
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ + +FN+++ KE ++E A F K + N+L++ LC+
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKA-FEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
++ AL+ F + + D +Y+ ++ C D++L EA Y + + +KG D
Sbjct: 607 TEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEA----YDLLSEMEEKGLEPDRF 661
Query: 227 IYRTLLFALCDQGKIQDAMQILEKI 251
Y + + L + GK+ + ++L+K
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKF 686
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 206/464 (44%), Gaps = 55/464 (11%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
+++ LS + R+ + V D M + E + A R Y RAG+ +A+++ + +
Sbjct: 148 ALLEALSAAGRMDLARRVFDAMPARN-EFSSGILA---RGYCRAGRSADALAVLDAMPEM 203
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
N V NT++ +E +++ A L R + + + N + LC+ R
Sbjct: 204 NLV----VCNTVVAGFCREGRVDEAERLVDR-MRAQGLAPNVVTFNGRISALCKAGRVLE 258
Query: 170 ALHVFQEMDF---QGC-YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A +F +M QG PD+ ++ +++ G C+ ++EAT L+ M G +
Sbjct: 259 AYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIM----RCGGFLRKV 314
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI---DLCPCNDGEDIEGAKS 282
Y L L G++ +A ++L ++ +G++ P S + I LC D+
Sbjct: 315 ESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQ-PNSYTYNIIVDGLCKEGKAFDVRRV-- 371
Query: 283 LINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
E +R G+ P + +Y+++ ++G +++LDEM KG P+L Y L +
Sbjct: 372 ---EDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQS 428
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA-------------------- 380
L K G E ++E KG + T NI++ GLC
Sbjct: 429 LLKAGRTTEVERLLERMSEKGYSLDTASC-NIIIDGLCRNSKLEMAMDIVDGMWNEGRLA 487
Query: 381 ----GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
GNS V+++ +SK C+ + TY L++ LC++GRF EA + L EM+ + P
Sbjct: 488 LRRLGNSFVSLVSDSSISKS--CLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISP 545
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
Y+ I G C GK A+ L +M ++ P ++ L+
Sbjct: 546 DSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLI 589
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 218/495 (44%), Gaps = 83/495 (16%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ--- 116
R+ E + ++D+M+ F I +AG++ EA +F ++ + W Q
Sbjct: 220 RVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQE----AWEQGLP 275
Query: 117 -----SFNTLLKEMVKESKLEAAHILF-LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
+F+ +L ++ A +L + C G+ K ++S N + L + R A
Sbjct: 276 RPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRK--VESYNRWLSGLVKNGRVGEA 333
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG---EDIVI 227
+ EM +G P+ +Y+I++ GLC + + + + F R SG D+V
Sbjct: 334 QELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRV--EDFVR-----SGVMTPDVVT 386
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKG---------------LKAPKS----------- 261
Y +LL A C +G A +IL+++ +KG LKA ++
Sbjct: 387 YTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMS 446
Query: 262 -RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID----LYNEGRIVE-- 314
+ + +D CN +I + L R S MA+D ++NEGR+
Sbjct: 447 EKGYSLDTASCN----------IIIDGLCRN------SKLEMAMDIVDGMWNEGRLALRR 490
Query: 315 -GDK----VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G+ V D +K P + Y + AL K+G DEA + + E M+ P +
Sbjct: 491 LGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVE-MIGKDISPDSVI 549
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y+ + G C G +++A+ L+ M K+ C + +Y +L+ G + E +++ EM
Sbjct: 550 YDTFIHGYCMHGKTSLAIKVLRDMEKR-SCNPSTRSYNLLIWGFQEKQKSDEILKLMSEM 608
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
+ V TYN LI+ C G +A+ L+EM+ +P+++ + L+ + C TAD
Sbjct: 609 KEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAF-CKTAD 667
Query: 490 LNVCRKTLE-QLSSC 503
+ ++ + LS+C
Sbjct: 668 FSAAQRVFDVALSTC 682
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 184/424 (43%), Gaps = 51/424 (12%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
R +L+ +L+K+L + N LL+ + +++ A +F E S I
Sbjct: 120 REDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMPARNEFSSGI 179
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQ---EMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
L C+ RS AL V EM+ C + ++ G C + R++EA L
Sbjct: 180 -----LARGYCRAGRSADALAVLDAMPEMNLVVC-------NTVVAGFCREGRVDEAERL 227
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI---LEKILRKGLKAPKSRRHR 265
+ R+ +G ++V + + ALC G++ +A +I +++ +GL P
Sbjct: 228 VD----RMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFD 283
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ L D ++ A L++ G + + SY+ L GR+ E ++L EM +
Sbjct: 284 VMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHE 343
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEV--IEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P+ Y + L K+G +A +V +E+ + G P V Y LL C GN+
Sbjct: 344 GVQPNSYTYNIIVDGLCKEG---KAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNT 400
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A L +M+ Q GC N TY +L+ L + GR E R+LE M + Y + N+
Sbjct: 401 TAANRILDEMA-QKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNI 459
Query: 444 LIRGLCSIGKQYEAV-----MWLE------------------EMISQAKLPDISVWSSLV 480
+I GLC K A+ MW E IS++ LPD +S+L+
Sbjct: 460 IIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLM 519
Query: 481 ASVC 484
++C
Sbjct: 520 NALC 523
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 177/397 (44%), Gaps = 27/397 (6%)
Query: 99 AVSLFKNLSQFN-CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
++S F++L T +N LL ++E +L+ L+ + + + N L
Sbjct: 91 SLSAFRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEALY-KDLLLAGATPDVFTRNAL 149
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYH--ILMKGLCNDRRLNEATHLLYSMFWR 215
++ L R DLA VF M P R + IL +G C R +A +L +M
Sbjct: 150 LEALSAAGRMDLARRVFDAM------PARNEFSSGILARGYCRAGRSADALAVLDAM--- 200
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK--SRRHRIDLCPCND 273
++V+ T++ C +G++ +A ++++++ +GL AP + RI C
Sbjct: 201 -----PEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGL-APNVVTFNGRISAL-CKA 253
Query: 274 GEDIEGAKSL--INEALIRG-GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
G +E + + EA +G P ++ M + G + E ++D MR GF
Sbjct: 254 GRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRK 313
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
+ Y L+ L K+G V EA E++ E +G P YNI++ GLC G A V +
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGV-QPNSYTYNIIVDGLCKEGK-AFDVRRV 371
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ + + TY L+ C G A+R+L+EM + P + TYNVL++ L
Sbjct: 372 EDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLK 431
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
G+ E LE M + D + + ++ +C N+
Sbjct: 432 AGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNS 468
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 193/502 (38%), Gaps = 105/502 (20%)
Query: 33 EAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAI 87
EA+E H G P Y ++ L + + +++ V D ++ + + +
Sbjct: 332 EAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLL 391
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR-SCYGWE 146
Y G A + ++Q C ++N LL+ ++K + L R S G+
Sbjct: 392 HAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYS 451
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-----------------------CY 183
+ + S N+++D LC+ + ++A+ + M +G C
Sbjct: 452 LDT--ASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCL 509
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PDR +Y LM LC + R +EA L M K D VIY T + C GK
Sbjct: 510 PDRITYSTLMNALCKEGRFDEAKKKLVEMIG----KDISPDSVIYDTFIHGYCMHGKTSL 565
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L + ++ CN PS SY+ +
Sbjct: 566 AIKVLRDMEKRS---------------CN---------------------PSTRSYNLLI 589
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ + E K++ EM+ KG +++ Y + + + GMV++A+ +++E M++
Sbjct: 590 WGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDE-MLQNEI 648
Query: 364 VPTVRVYNILLKGLCDAGNSAVA---------------VMY------LKKMSKQVGCVAN 402
VP V + +L+K C + + A V+Y L ++ +
Sbjct: 649 VPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELSTYARWIEAKNI 708
Query: 403 GET------------YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
ET Y ++ GLC A +L+ + + Y T+ +I L
Sbjct: 709 LETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSE 768
Query: 451 IGKQYEAVMWLEEMISQAKLPD 472
GK+++A M E+M+ A D
Sbjct: 769 SGKKHDADMLSEKMMEIADCND 790
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 37/471 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +++ + ++ TE V+ +M+ + C+ + TYARAG EA +
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + ++NT++ K++ A LF + V + + + NL++ +L + R
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPN-VNTYNLVLGMLGKKSR 400
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE-ATHLL---------------- 209
+ L + EM GC P+R +++ ++ +C R + + T +L
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYN 459
Query: 210 ---------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
+ M+ ++ G I Y LL L QG A I+ K+ K
Sbjct: 460 TLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTK 519
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYNEGRIV 313
G K P + + + L G ++ G ++ NE G + PS + I + R+
Sbjct: 520 GFK-PNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLD 578
Query: 314 EGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
+ E++ +G+ P LV++ + L+ K+GM +A EV + + + P + YN L
Sbjct: 579 GMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDS-IKRSGLSPDLITYNSL 637
Query: 374 LKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
+ S A L ++ + +Y +++G C+ G EA RVL EM+
Sbjct: 638 MDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADG 697
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
PC TY+ L+ G S+ EA + M+ P + +V S C
Sbjct: 698 MAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYC 748
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 47/263 (17%)
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
GS D+ Y T+L AL G+ + A+++ ++ R+G+
Sbjct: 169 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVA---------------------- 206
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNE-----GRIVEGDKVLDEMRTKGFWPSLVMY 334
P+L +Y+ + +D+Y RIV +LDEMR G P
Sbjct: 207 --------------PTLVTYNVV-LDVYGRMGRSWPRIV---ALLDEMRAAGVEPDGFTA 248
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+AA +DG+VDEA+ E+ +G P V YN LL+ AGN A+ L +M
Sbjct: 249 STVIAACCRDGLVDEAVAFFEDLKARG-HAPCVVTYNALLQVFGKAGNYTEALRVLGEM- 306
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+Q GC + TY L R G F EA+R L+ M + P TYN ++ ++GK
Sbjct: 307 EQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKV 366
Query: 455 YEAVMWLEEMISQAKLPDISVWS 477
EA+ ++M +P+++ ++
Sbjct: 367 DEALALFDQMKKTGFVPNVNTYN 389
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 185/487 (37%), Gaps = 78/487 (16%)
Query: 67 VIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMV 126
++D+M+ E +T I R G ++EAV+ F++L ++N LL+
Sbjct: 232 LLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFG 291
Query: 127 KESK-LEAAHIL---------------------FLRSCYGWEVKSRIQSL---------- 154
K EA +L + R+ + E + ++
Sbjct: 292 KAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAF 351
Query: 155 --NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N +M + D AL +F +M G P+ +Y++++ L R ++ M
Sbjct: 352 TYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFT----VMLEM 407
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQD-AMQILEKILRKGLKAPKSRRHRIDLCPC 271
+S+ G + V + T+L A+C + ++D ++LE + G++ + + +
Sbjct: 408 LGEMSRSGCTPNRVTWNTML-AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYG 466
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
G K + NE G P + +Y+A+ L +G ++ +MRTKGF P+
Sbjct: 467 RCGSRTNAFK-MYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNE 525
Query: 332 VMYEAKLAALFKDGMVD-----------------------------------EALEVIEE 356
Y L K G V + +E +
Sbjct: 526 QSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQ 585
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
E+ + P + ++N +L G + A + K+ G + TY L+D +
Sbjct: 586 EVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSI-KRSGLSPDLITYNSLMDMYAKC 644
Query: 417 GRFLEASRVLEEM-LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
EA ++L ++ ++ P V +YN +I G C G EA L EM++ P
Sbjct: 645 SESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVT 704
Query: 476 WSSLVAS 482
+ +LV
Sbjct: 705 YHTLVGG 711
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 287 ALIR-GGIPSLASYSAMAIDLYNEGRIVEGDKV---LDEMR-TKGFWPSLVMYEAKLAAL 341
AL+R G A SA+ + + GR + D V LDE G + Y L AL
Sbjct: 125 ALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHAL 184
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
+ G + ALE+ E +G PT+ YN++L G S ++ L + G
Sbjct: 185 SRAGRYERALELFAELRRQGV-APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEP 243
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+G T ++ CRDG EA E++ R + PCV TYN L++ G EA+ L
Sbjct: 244 DGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVL 303
Query: 462 EEMISQAKLPDISVWSSLVAS 482
EM PD ++ L +
Sbjct: 304 GEMEQNGCQPDAVTYNELAGT 324
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 184/412 (44%), Gaps = 13/412 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I + R +++++MK + + ++ I + + ++ A+SLF+ +
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
C ++ L++ + K ++ EA H + G + + +N +++ L +
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVV--MNNMINFLGKAG 349
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR-RLNEATHLLYSMFWRISQKGSGED 224
R D A+ +FQEM C P +Y+ ++K L + R +E S F R+ + G
Sbjct: 350 RLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVP----SWFERMKESGISPS 405
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA-PKSRRHRIDLCPCNDGEDIEGAKSL 283
Y L+ C +++ AM +LE++ KG P + ID D+ A L
Sbjct: 406 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL--ACEL 463
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
E G S Y+ M L GR+ + + DEM G P + Y A ++ L +
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
GM+DEAL + G +P + YNI+L GL G A+ L M KQ +
Sbjct: 524 TGMLDEALSTMRRMQEHGC-IPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDV 581
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQY 455
+Y ++ L G F EA++++EEM + + TY+ ++ + + +Y
Sbjct: 582 VSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEY 633
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 119/527 (22%), Positives = 220/527 (41%), Gaps = 78/527 (14%)
Query: 28 LKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQM-KGDSCECKDSVFATA 86
++ F+ A ++ NY H+ Y ++I L + EM ++I +M + C + +
Sbjct: 107 MQFFRWAAKRR-NYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEV 165
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R A +++A+++F + C Q++N+++ ++ E + H L+
Sbjct: 166 VRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGH 225
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLA-----------------------------------L 171
+ + L+ C+ R D A L
Sbjct: 226 CFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGAL 285
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTL 231
+F+EM Q C PD +Y L++GL R++EA H Y M ++G D V+ +
Sbjct: 286 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEM----QREGCRPDTVVMNNM 341
Query: 232 LFALCDQGKIQDAMQILEKI--LR------------KGLKAPKSRRHRID---------- 267
+ L G++ DAM++ +++ LR K L KSR +
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 268 LCPCN-------DG----EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ P + DG +E A L+ E +G P A+Y ++ L R
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++ E++ S +Y + L K G +D+A+ + +E M K P V YN L+ G
Sbjct: 462 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE-MNKLGCAPDVYAYNALMSG 520
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
L G A+ +++M + GC+ + +Y I+++GL + G A +L M + P
Sbjct: 521 LARTGMLDEALSTMRRMQEH-GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 579
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
V +YN ++ L G EA +EEM + D+ +SS++ ++
Sbjct: 580 DVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 15/334 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F+E + +Y R + Y +I L ++ RI E +M+ + C V
Sbjct: 284 ALSLFEEMRHQY--CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNM 341
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I +AG+L++A+ LF+ + C+ ++NT++K + ESK A+ + S +
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALF-ESKSRASEV---PSWFERM 397
Query: 147 VKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+S I + ++L+D C+ R + A+ + +EMD +G P +Y L+ L +R
Sbjct: 398 KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 457
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A L F + + +Y ++ L G++ DA+ + +++ + G AP
Sbjct: 458 DLACEL----FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC-APDVY 512
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ + ++ A S + G IP + SY+ + L G ++L M
Sbjct: 513 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 572
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+ P +V Y L AL GM +EA +++EE
Sbjct: 573 KQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEE 606
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 283 LINEALIRGG-IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
L NE G P +YSA+ GR ++L+EM+ G P+ +Y +
Sbjct: 216 LYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLF 275
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
FK V AL + EE M P V Y L++GL AG A + +M ++ GC
Sbjct: 276 FKLDDVHGALSLFEE-MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE-GCRP 333
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC-SIGKQYEAVMW 460
+ +++ L + GR +A ++ +EM P V TYN +I+ L S + E W
Sbjct: 334 DTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW 393
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
E M P +S L+ C
Sbjct: 394 FERMKESGISPSSFTYSILIDGFC 417
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 207/499 (41%), Gaps = 62/499 (12%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTAL-----KIFKEAKEKYPNYRHNGPVYASMIGILSESN 59
WPR LT LS+++ +P A+ +F A P+ PV+A+ + LS ++
Sbjct: 53 WPRRLTARSLSRLLLGAATPELAVLALRHALFHAAHPLPPSL----PVFAAALSRLSHAD 108
Query: 60 R---ITEMKEVIDQMKGDSCEC-KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT 115
+ V+ ++ D F +R L LF +L FN T
Sbjct: 109 AGAAARHLPPVLSLLRASRLPAFSDRPFLPLLRALRPLPSLR----LFLSLPSFNSRPST 164
Query: 116 QSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQ 175
+SFN LL +V S L R + L++
Sbjct: 165 RSFNALLHSLV--------------------------SARRLRLAAALFRAAPTKLYI-- 196
Query: 176 EMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF-WRISQKGSGEDIVIYRTLLFA 234
P+ S +IL+KGL LN A +L M W I D+V Y T+L A
Sbjct: 197 -------TPNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIV-----PDVVTYTTVLTA 244
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C +G ++ A Q+ + I+ G + P + + + + ++ A +++E G P
Sbjct: 245 YCAKGDLEGAQQLFDDIIASG-RRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQP 303
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +YS + E + E + EM G+ P + + L +DG EA E +
Sbjct: 304 NEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANE-M 362
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
+MVK + P V + L+ LC G A ++ + G + + TY L+ GLC
Sbjct: 363 WRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDELER--GFLPSLLTYNSLIIGLC 420
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+G EA RV ++M+ R Y P TY LI+G C IGK E +EM+S+ P
Sbjct: 421 ENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKF 480
Query: 475 VWSSLVASVCCNTADLNVC 493
++ +LV S+ + D VC
Sbjct: 481 LYQALVDSLSKPSHDDTVC 499
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 131/321 (40%), Gaps = 34/321 (10%)
Query: 94 GQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQS 153
G LN A+ + + + V ++ T+L + LE A LF +
Sbjct: 214 GDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLF-DDIIASGRRPDATM 272
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+L+D C R+ A + EM G P+ +Y ++++ C +R+ EA L M
Sbjct: 273 YTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREML 332
Query: 214 ------------------------------WR-ISQKGSGEDIVIYRTLLFALCDQGKIQ 242
WR + +K D + TL++ LC +G +Q
Sbjct: 333 GAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQ 392
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM 302
+A ++ +++ R L + + I + C +GE ++ A + ++ + R P+ +Y A+
Sbjct: 393 EARKLFDELERGFLPSLLTYNSLI-IGLCENGE-LQEAGRVWDDMVERRYEPNAMTYEAL 450
Query: 303 AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGT 362
G+ EG + EM ++G PS +Y+A + +L K D ++E ++G
Sbjct: 451 IKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHDDTVCTIVEAAALRGQ 510
Query: 363 FVPTVRVYNILLKGLCDAGNS 383
+ I +K + D +
Sbjct: 511 DFLDGHSWEIFIKKMVDTNET 531
>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
Length = 633
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 8/302 (2%)
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL-CNDRRLNEATHLLYSMFWRISQK 219
L R AL V M G PD + +L+ C RR + A ++ W ++
Sbjct: 192 LSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVR---WMVAN- 247
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D+V Y TL+ LC G++ +A+ +L+ +L +G + I C G I
Sbjct: 248 GVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGR-IHE 306
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK L+N + G PS A+Y+ + L G E D +L+E KG+ P ++ Y + +
Sbjct: 307 AKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMD 366
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
L K G +D++ ++++ + G P+ NILL G+C + ++A A L + S ++G
Sbjct: 367 GLCKAGRIDKSFALVDKMLSNG-LQPSEVTLNILLDGVCRS-STAWAAKRLLECSAELGW 424
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
AN Y ++ LC + R+L ++ +M + P T+N+++ LC +G+ ++A+
Sbjct: 425 DANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALC 484
Query: 460 WL 461
L
Sbjct: 485 LL 486
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 273 DGEDIEGAKSLINE--ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
DG + A L++E AL+R P A ++ +A L + R VLD M G P
Sbjct: 158 DGAGADRALHLLDEMRALLRRR-PDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPD 216
Query: 331 LV-------MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+Y +L D A EV+ MV P V Y+ L+ GLC AG
Sbjct: 217 AAACTVLVGVYACRLRRF------DAAYEVVRW-MVANGVAPDVVTYSTLISGLCSAGQV 269
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
A A+ L M ++ GC N TY +V C GR EA R+L M+ + P TYNV
Sbjct: 270 AEALGVLDLMLEE-GCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNV 328
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ LC +G E LEE ++ PD+ +SS + +C
Sbjct: 329 LVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLC 369
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 191/447 (42%), Gaps = 16/447 (3%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYA-RAGQLNEAV 100
R + + ++ LS ++R V+D M D + + YA R + + A
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 238
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + + +++TL+ + ++ EA +L L G + + + ++
Sbjct: 239 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNA--HTYTPIVH 296
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C R A + M G P +Y++L++ LC E LL + K
Sbjct: 297 AYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEES----TAK 352
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G D++ Y + + LC G+I + +++K+L GL+ P I L
Sbjct: 353 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQ-PSEVTLNILLDGVCRSSTAWA 411
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
AK L+ + G ++ +Y+ + L +E R + K+ +M KG P+ + +
Sbjct: 412 AKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVH 471
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L K G + +AL ++ + FV TV YN L++ L +G + L +M + G
Sbjct: 472 SLCKLGRLHKALCLLRSK----EFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEG-GI 526
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY +++D LCR+ +FL A + L ++P + +IRGL G +
Sbjct: 527 APNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFP--SAFLSIIRGLIVGGMLGQLHT 584
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCN 486
+ ++ Q + ++ ++ L+ ++C N
Sbjct: 585 LIGCVLGQGFIIEVYIYQELIKALCKN 611
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 152/377 (40%), Gaps = 45/377 (11%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+++I L + ++ E V+D M + C+ + + Y G+++EA L +
Sbjct: 255 TYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTM 314
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY-GWEVKSRIQSLNLLMDVLCQCR 165
T ++N L++ + K E L S GW + + + MD LC+
Sbjct: 315 IASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGW--TPDVITYSSYMDGLCKAG 372
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R D + + +M G P + +IL+ G+C A LL ++ G ++
Sbjct: 373 RIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECS----AELGWDANV 428
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--------------RRHRIDLCPC 271
V Y T++ LCD+ + +++ + +KG+ AP S R H+ LC
Sbjct: 429 VNYNTVMRRLCDERRWLSVVKLFTDMAKKGI-APNSWTFNIVVHSLCKLGRLHKA-LCLL 486
Query: 272 NDGE---------------DIEGAKS---LINEALIRGGI-PSLASYSAMAIDLYNEGRI 312
E I G + L+ +I GGI P+ +YS + L E +
Sbjct: 487 RSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKF 546
Query: 313 VEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNI 372
+ + F+PS + + + L GM+ + +I + +G F+ V +Y
Sbjct: 547 LVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQG-FIIEVYIYQE 603
Query: 373 LLKGLCDAGNSAVAVMY 389
L+K LC G MY
Sbjct: 604 LIKALCKNGYCQSVEMY 620
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 176/432 (40%), Gaps = 10/432 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQL--NEAVSLFKNLSQFNCV 112
L E N+I + + D MK ++ + Y +L EA L +
Sbjct: 184 LVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVK 243
Query: 113 NWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALH 172
++ T L + + ++ +A C N ++ C+ + A+
Sbjct: 244 PNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGN-PCNTYCFNAVIQGFCREGQVQEAIE 302
Query: 173 VFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLL 232
VF M G PD SY IL+ GLC + LL M ++ G +V Y +LL
Sbjct: 303 VFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEM----ARNGIAPTLVSYSSLL 358
Query: 233 FALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG 292
LC GK++ A ++ ++ +G K + I L C +IE L N+ +
Sbjct: 359 HGLCRAGKVELAFELFRRLEEQGFKHDHIV-YSIILNGCCQHLNIEVVCDLWNDMVHHNF 417
Query: 293 IPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
+P +Y+++ + + V + M G P++V + K+ M+DEA
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ + G VP + +Y +++ GLC S M K+ G V + Y I++D
Sbjct: 478 FLHKVRQFG-IVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR-GYVPDTVVYSIIIDS 535
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ + EA R+ +ML P V TY LI GLC + E V + MI + PD
Sbjct: 536 FVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPD 595
Query: 473 ISVWSSLVASVC 484
+++SL+ C
Sbjct: 596 RILYTSLIVCYC 607
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 186/483 (38%), Gaps = 49/483 (10%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A ++ E + K + N Y + + LS + ++ + + C F
Sbjct: 230 AFELLSEMEMK--GVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAV 287
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ + R GQ+ EA+ +F + + V T S++ L+ + K+ + + L +
Sbjct: 288 IQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG- 346
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S + L+ LC+ + +LA +F+ ++ QG D Y I++ G C +
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVC 406
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK--------- 257
L M D Y +L++A C + DA+ + E +L G+
Sbjct: 407 DLWNDMV----HHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL 462
Query: 258 -------------------------APKSRRHRI---DLCPCNDGEDIEGAKSLINEALI 289
P +R+ LC N + + G + + +
Sbjct: 463 VDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWG---IFADMIK 519
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
RG +P YS + ++ E ++ +M +G P++ Y + + L D + E
Sbjct: 520 RGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPE 579
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
+ + + + +G P +Y L+ C N A+ + M K +G A+ Y L
Sbjct: 580 VVTLFKHMIWEG-LTPDRILYTSLIVCYCKRSNMKAALEIFRGMGK-LGLSADAFLYTCL 637
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ G + A ++EEM + P V TY LI G IG + +A M M+
Sbjct: 638 IGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGI 697
Query: 470 LPD 472
PD
Sbjct: 698 TPD 700
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 29/303 (9%)
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
R L E +L S S GS + +Y T++ + +DA+ L
Sbjct: 121 RELFELAPMLVS-----SLGGSMTLLQVYATIIRIFVELSMFEDAL----------LTYT 165
Query: 260 KSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEG-- 310
++++ ++L CN + I A+SL ++ G P++ SYS + + Y G
Sbjct: 166 EAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVL-MSAYTHGDR 224
Query: 311 -RIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
+ E ++L EM KG P+ Y L L + V A ++ +G T
Sbjct: 225 LYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTY-C 283
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
+N +++G C G A+ M K+ G V + +Y ILVDGLC+ G L +L EM
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAM-KKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEM 342
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTAD 489
P + +Y+ L+ GLC GK A + Q D V+ S++ + CC +
Sbjct: 343 ARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVY-SIILNGCCQHLN 401
Query: 490 LNV 492
+ V
Sbjct: 402 IEV 404
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 200/450 (44%), Gaps = 10/450 (2%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
LTP+ + +++ + P K + + K + H+ Y+ ++ L SN K V
Sbjct: 36 LTPSLVYEVVNRLHIPNLGFKFVEFCRHKL-HMSHSYLTYSLLLRSLCRSNLHHTAKVVY 94
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
D M+ D + + + +YA G+L+ + L ++ N +N L ++++
Sbjct: 95 DWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQ 154
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
+K+ A +LF R K ++N+LM LC+ D A + ++ GC PD +
Sbjct: 155 NKVVDAVVLF-RELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVIT 213
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGS-GEDIVIYRTLLFALCDQGKIQDAMQI 247
Y+ L+ GLC ++ A LL + G D+V Y T++ C K+++ +
Sbjct: 214 YNTLIHGLCRINEVDRARSLLK----EVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLL 269
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+++R G AP + + D+ A +L + L++G +P +A+++++ +
Sbjct: 270 FGEMIRSG-TAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYF 328
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
G++ + + +M K +L + ++ L + + +A +++ + + VP
Sbjct: 329 RLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDIL-RLLNESDIVPQP 387
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLE 427
+YN ++ G C +GN A + +M C + T+ IL+ G C GR EA +
Sbjct: 388 FIYNPVIDGYCKSGNVDEANKIVAEMEVN-RCKPDKLTFTILIIGHCMKGRMPEAIGIFH 446
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ML P T N L L G EA
Sbjct: 447 KMLAVGCAPDEITVNNLRSCLLKAGMPGEA 476
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 150/382 (39%), Gaps = 42/382 (10%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N VY + +L N++ + + ++ + +R RAG+++EA L
Sbjct: 140 NAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLL 199
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+L F C+ ++NTL+ + + ++++ A L C E + S ++ C+
Sbjct: 200 NDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCK 259
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ + +F EM G P+ +++ L+ G +L + L +++ ++ +G
Sbjct: 260 FSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGF---GKLGDMASAL-ALYEKMLVQGCVP 315
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + +L+ G++ AM + K+ K + A
Sbjct: 316 DVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGA------------------------- 350
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+L ++S + L N R+ + +L + P +Y + K
Sbjct: 351 -----------TLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCK 399
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G VDEA +++ E V P + IL+ G C G A+ KM VGC +
Sbjct: 400 SGNVDEANKIVAEMEVNRC-KPDKLTFTILIIGHCMKGRMPEAIGIFHKM-LAVGCAPDE 457
Query: 404 ETYGILVDGLCRDGRFLEASRV 425
T L L + G EA+RV
Sbjct: 458 ITVNNLRSCLLKAGMPGEAARV 479
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Query: 305 DLYN----EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
DL+N + ++V+ + E+ + P + L + G +DEA ++ +
Sbjct: 146 DLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSF 205
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G +P V YN L+ GLC A LK++ + +Y ++ G C+ +
Sbjct: 206 GC-LPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKME 264
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
E + + EM+ P T+N LI G +G A+ E+M+ Q +PD++ ++SL+
Sbjct: 265 EGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLI 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N Y L + L R + ++A + E++ Y P T N+L+RGLC G+ EA
Sbjct: 139 VNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRL 198
Query: 461 LEEMISQAKLPDISVWSSLVASVC 484
L ++ S LPD+ +++L+ +C
Sbjct: 199 LNDLRSFGCLPDVITYNTLIHGLC 222
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 70/437 (16%)
Query: 100 VSLFKNLSQFNCVNWTQ---SFNTLLKEMVKESKLE---AAHILFLRSCYGWEVKSRIQS 153
VSLF + + + T +++ L+ + +LE A L L+S GW V + +
Sbjct: 76 VSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKS--GWRVNNIV-- 131
Query: 154 LNLLMDVLCQCRRSDLALHVF-QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL--- 209
+N L+ LC +R A+ + + M GC PD SY+ L+KG CN++R EA LL
Sbjct: 132 INQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191
Query: 210 -------------------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
Y++F + +G ++V Y T++ LC
Sbjct: 192 ADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKA 251
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED--IEGAKS---------LINEA 287
+ A + ++++ KG+K P ND + I G S ++ E
Sbjct: 252 QVVDRAEGVFQQMIDKGVK------------PDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G P +Y ++ L N GR E + D M KG P++ +Y + G +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
E +++ MV+ P ++NI+ A+ KM KQ G + YG
Sbjct: 360 SEMHDLLNL-MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNYG 417
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
L+D LC+ GR +A +M+ P + +N L+ GLC++ K +A + EM++Q
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477
Query: 468 AKLPDISVWSSLVASVC 484
PD+ +++++ ++C
Sbjct: 478 GIRPDVVFFNTILCNLC 494
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 209/482 (43%), Gaps = 53/482 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITE-MKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
+R N V ++ L ++ R+ E M ++ +M C + T ++ + + EA
Sbjct: 125 WRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEA 184
Query: 100 VSLFKNLSQF---NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNL 156
+ L ++ +C S+ ++ E +++ A+ LFL ++ + +
Sbjct: 185 LELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLE-MMDRGIQPNVVTYTT 243
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
++D LC+ + D A VFQ+M +G PD ++Y+ L+ G + + E +L M
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM---- 299
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
S G D Y +LL LC+ G+ ++A + + ++RKG+K P + I + G
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK-PNVAIYGILI----HGYA 354
Query: 277 IEGAKS----LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+GA S L+N + G P ++ + + I E + ++M+ +G P +V
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-------------- 378
Y A + AL K G VD+A+ + M +G P + V+N L+ GLC
Sbjct: 415 NYGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 379 --DAGNSAVAVMY------------------LKKMSKQVGCVANGETYGILVDGLCRDGR 418
+ G V + L + ++VG +Y L+ G C GR
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
EA++ L+ ML P TYN L+ G C G+ +A EM+ P + +S+
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 479 LV 480
++
Sbjct: 594 IL 595
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 183/432 (42%), Gaps = 47/432 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ L + R E + + D M + +++ I YA G L+E
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSE-------- 361
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ LL MV E+ L H +F N++ +
Sbjct: 362 -----------MHDLLNLMV-ENGLSPDHHIF----------------NIIFTAYAKKAM 393
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A+H+F +M QG PD +Y L+ LC R+++A F ++ +G +I
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV----LKFNQMMNEGVAPNIF 449
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGAKSLIN 285
++ +L++ LC K + A + ++L +G++ P LC C G+ + A+ LI+
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR-PDVVFFNTILCNLCTKGQ-VMKAQRLID 507
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G P + SY+ + GRI E K LD M + G P Y L + G
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN-SAVAVMYLKKMSKQVGCVANGE 404
+D+A V E M++ P V Y+ +L GL S +YL ++ G N
Sbjct: 568 RIDDAYGVFRE-MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS--GKQWNIW 624
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
Y I+++GL ++ EA ++ + + + + + T+N++I L G+ +A+ +
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684
Query: 465 ISQAKLPDISVW 476
S +PD+ +
Sbjct: 685 SSYGLVPDVFTY 696
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 178/420 (42%), Gaps = 8/420 (1%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
+ N +Y +I + ++EM ++++ M + +F YA+ ++EA+
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+F + Q ++ L+ + K +++ A +L V I N L+ L
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA-VLKFNQMMNEGVAPNIFVFNSLVYGL 458
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C + + A + EM QG PD ++ ++ LC ++ +A L+ M + G+
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM----ERVGT 514
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++ Y TL+ C G+I +A + L+ +L GLK + + + C G I+ A
Sbjct: 515 RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR-IDDAY 573
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E L G P + +YS + L+ R E ++ M T G ++ +Y L L
Sbjct: 574 GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGL 633
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K+ VDEA ++ + + F + +NI++ L +G + A M+L G V
Sbjct: 634 SKNNCVDEAFKLF-QSLCSKDFQLEITTFNIMIGALFKSGRNEDA-MHLFATISSYGLVP 691
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+ TY ++ + L +G E + M P N L+R L G A +L
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 188/458 (41%), Gaps = 44/458 (9%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ + + V QM + + + I Y G+ E V +
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---LRS------------CYGWEVK 148
+ +S ++ +LL + + A LF +R +G+ K
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATK 356
Query: 149 SRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
+ ++ L++++ + G PD ++I+ ++EA H+
Sbjct: 357 GALSEMHDLLNLMVE----------------NGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--- 265
F ++ Q+G D+V Y L+ ALC G++ DA+ +++ +G+ AP
Sbjct: 401 ----FNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLV 455
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
LC + E AK E L +G P + ++ + +L +G++++ +++D M
Sbjct: 456 YGLCTVDKWEK---AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P ++ Y + G +DEA + ++ + G P YN LL G C AG
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG-LKPDEWTYNTLLHGYCRAGRIDD 571
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A ++M + G TY ++ GL RF EA + M+ + YN+++
Sbjct: 572 AYGVFREMLRN-GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
GL EA + + S+ +I+ ++ ++ ++
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 188/478 (39%), Gaps = 46/478 (9%)
Query: 48 YASMIGILSESNRITEMKEVIDQM---KGDSCECKDSVFATAIRTYARAGQLNEAVSLFK 104
Y +++ R E E++ M +G SC +A I + GQ+++A +LF
Sbjct: 168 YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFL 227
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ ++ T++ + K ++ A +F + VK + N L+
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF-QQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
+ + + +EM G PD +Y L+ LCN+ R EA L SM +KG +
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI----RKGIKPN 342
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ IY L+ +G + + +L ++ GL +P I I+ A +
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGL-SPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRI-------------------------VEGDKVL 319
N+ +G P + +Y A+ L GR+ V G +
Sbjct: 402 NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461
Query: 320 D----------EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
D EM +G P +V + L L G V +A +I+ GT P V
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT-RPGVIS 520
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
Y L+ G C G A L M VG + TY L+ G CR GR +A V EM
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVM-LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
L P V TY+ ++ GL + + EA MI+ K +I +++ ++ + N
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 128/327 (39%), Gaps = 84/327 (25%)
Query: 167 SDLALHVFQEMDFQGCY----PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
S+L + +F M + C PD +Y IL+ C RL ++ F I + G
Sbjct: 72 SELVVSLFNRM-IRECTIKVTPDPCTYSILIGCFCRMGRLEHG----FATFGLILKSGWR 126
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+ ++ LL LCD ++ +AM IL K + P+
Sbjct: 127 VNNIVINQLLKGLCDAKRLCEAMDILVK------RMPE---------------------- 158
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM---RTKGFWPSLVMYEAKLA 339
G P + SY+ + NE R E ++L M + + P++V Y +
Sbjct: 159 -------LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
F +G VD+A YN ++L+ M + G
Sbjct: 212 GFFTEGQVDKA-------------------YN----------------LFLEMMDR--GI 234
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
N TY ++DGLC+ A V ++M+ + P +TYN LI G SIGK E V
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294
Query: 460 WLEEMISQAKLPDISVWSSLVASVCCN 486
LEEM + PD + SL+ +C N
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNN 321
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 192/438 (43%), Gaps = 36/438 (8%)
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
R+ E ++I+ G C + I Y R G + + L + + ++
Sbjct: 1162 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYG 1221
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVLCQCRRSDLALHVF 174
+L+ + K+ LE LFL E++ R +Q N ++D LC+CR + A+ +
Sbjct: 1222 SLINWLGKKGDLEKIGSLFL------EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVIL 1275
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
++M GC PD +++ L+ GLC++ + +A H L ++ + + Y L+
Sbjct: 1276 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAI----RRELNPNQLSYTPLIHG 1331
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG--AKSLINEALI--- 289
C +G++ A +L +++ +G H D+ G I G ++EALI
Sbjct: 1332 FCMRGELMVASDLLVEMMGRG--------HTPDV--VTFGALIHGLVVAGKVSEALIVRE 1381
Query: 290 ----RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
R P + Y+ + L + + +L+EM K P +Y + +
Sbjct: 1382 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1441
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+ +A ++ E KG P + N ++KG C G + A++ + M K VGC+ + T
Sbjct: 1442 NLGDARKIFEFMEHKG-ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK-VGCIPDEFT 1499
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G + G A R L +M+ R P V TY+ LI G C G A M
Sbjct: 1500 YTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQ 1559
Query: 466 SQAKLPDISVWSSLVASV 483
++A P++ ++ L+ S+
Sbjct: 1560 AEALSPNVVTYTILIGSL 1577
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 46/332 (13%)
Query: 155 NLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
N L+ +L + RR D A ++ EM + D S +L++GLC +RR+ E L+ + +
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARW- 1174
Query: 215 RISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
G+G +V Y L+ C +G + + +L ++ KG
Sbjct: 1175 -----GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGF---------------- 1213
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+P+L +Y ++ L +G + + + EMR +GF P++
Sbjct: 1214 --------------------LPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + + AL K +A+ VI ++M P + +N L+ GLC G+ A +L++
Sbjct: 1254 IYNSVIDALCKCRSATQAM-VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 1312
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
++ N +Y L+ G C G + AS +L EM+ R + P V T+ LI GL G
Sbjct: 1313 AIRR-ELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1371
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
K EA++ E+M + PD+++++ L++ +C
Sbjct: 1372 KVSEALIVREKMTERQVFPDVNIYNVLISGLC 1403
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 188/465 (40%), Gaps = 71/465 (15%)
Query: 87 IRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ YA AG L +A + + + Q+ + N LLK +V++ + + A L+ G
Sbjct: 1083 VAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLY-DEMLGK 1141
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ + S +L+ LC RR + L + + GC P Y++L+ G C +
Sbjct: 1142 DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 1201
Query: 206 THLLY-------------------------------SMFWRISQKGSGEDIVIYRTLLFA 234
LL S+F + ++G ++ IY +++ A
Sbjct: 1202 LLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDA 1261
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC AM IL+++ G + + C++G + A+ + EA+ R P
Sbjct: 1262 LCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH-VRKAEHFLREAIRRELNP 1320
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ SY+ + G ++ +L EM +G P +V + A + L G V EAL ++
Sbjct: 1321 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL-IV 1379
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+M + P V +YN+L+ GLC A L++M ++ + Y L+DG
Sbjct: 1380 REKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFI 1438
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM--------------- 459
R +A ++ E M + P + + N +I+G C G EA++
Sbjct: 1439 RSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 1498
Query: 460 --------------------WLEEMISQAKLPDISVWSSLVASVC 484
WL +MI + P++ +SSL+ C
Sbjct: 1499 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 111/538 (20%), Positives = 193/538 (35%), Gaps = 65/538 (12%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T L + K+ +F E +++ + N +Y S+I L + T+
Sbjct: 1215 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR--GFSPNVQIYNSVIDALCKCRSATQAM 1272
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ QM C+ F T I G + +A + + S+ L+
Sbjct: 1273 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1332
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+L A L + G + + L+ L + AL V ++M + +PD
Sbjct: 1333 CMRGELMVASDLLV-EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1391
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y++L+ GLC R L A ++L M +K D +Y TL+ + DA
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEML----EKNVQPDEFVYATLIDGFIRSENLGDAR 1447
Query: 246 QILEKILRKGLKA----------------------------------PKSRRHRIDLCPC 271
+I E + KG+ P + +
Sbjct: 1448 KIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
++ GA + + + R P++ +YS++ G + + M+ + P++
Sbjct: 1508 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNV 1567
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL------------CD 379
V Y + +LFK V A + E M+ P + L+ GL C+
Sbjct: 1568 VTYTILIGSLFKKDKVLRA-GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1626
Query: 380 A----GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
G A+ V++ KK+ +G N Y ++ LCR EA M + Y
Sbjct: 1627 TSEVHGKDALLVVF-KKLVFDIGDPRN-SAYNAIIFSLCRHNMLREALDFKNRMAKKGYV 1684
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL-----VASVCCNTA 488
P T+ L+ G CS+GK L Q + I + L SVCC +
Sbjct: 1685 PNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVS 1742
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D L M G P+ A +AA GM+ +A ++ E + +P V N LLK
Sbjct: 1061 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLK 1120
Query: 376 GLCDAGN-SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
L + +Y + + K G A+ + +LV GLC + R E +++E
Sbjct: 1121 LLVEQRRWDDARKLYDEMLGKDSG--ADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGC 1178
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V YNVLI G C G ++ L EM ++ LP + + SL+
Sbjct: 1179 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLI 1224
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,284,822,711
Number of Sequences: 23463169
Number of extensions: 287695210
Number of successful extensions: 823341
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3912
Number of HSP's successfully gapped in prelim test: 4126
Number of HSP's that attempted gapping in prelim test: 671277
Number of HSP's gapped (non-prelim): 48007
length of query: 504
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 357
effective length of database: 8,910,109,524
effective search space: 3180909100068
effective search space used: 3180909100068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)