BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043204
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SYK1|PPR11_ARATH Pentatricopeptide repeat-containing protein At1g05600
OS=Arabidopsis thaliana GN=At1g05600 PE=2 SV=1
Length = 504
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/489 (64%), Positives = 396/489 (80%), Gaps = 1/489 (0%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
VRWPR+LTP+ LSQI+KKQK+P+TALK+F+EAKE++P+Y HNG VYA+MI IL +SNR+
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
EMK VI++MK DSCECKDSVFA+ IRT++RAG+L +A+SLFK+L +FNCVNW+ SF+TLL
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
+EMVKES+LEAA +F + CYGWEV SRI +LNLLM VLCQ RSDLA VFQEM++QGC
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQ 242
YPDR+SY ILMKG C + +L EATHLLYSMFWRISQKGSGEDIV+YR LL ALCD G++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 243 DAMQILEKILRKGLKAPKSRRHRIDLCPC-NDGEDIEGAKSLINEALIRGGIPSLASYSA 301
DA++IL KILRKGLKAPK H I+ + E IE K L+ E LIRG IP L SYSA
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
MA DL+ EG++VEG++VL MR+KGF P+ +Y AK+ AL + G + EA+ VI +EM++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
+PTV VYN+L+KGLCD G S AV YLKKMSKQV CVAN ETY LVDGLCRDG+FLE
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVA 481
AS+V+EEMLI+S++P VETY+++I+GLC + ++YEAVMWLEEM+SQ +P+ SVW +L
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 482 SVCCNTADL 490
SVC D+
Sbjct: 484 SVCFCAIDV 492
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 231/477 (48%), Gaps = 13/477 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P LL P +++ +IK QK P+ AL++F + K ++H Y S+I L + M+
Sbjct: 3 PPLL-PKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 66 EVIDQMKGD-SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
EV+ M+ + + V+ A++ Y R G++ EAV++F+ + ++C S+N ++
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
+V + AH +++R + + S + M C+ R AL + M QGC
Sbjct: 121 LVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
+ +Y ++ G + E Y +F ++ G + + LL LC +G +++
Sbjct: 180 NVVAYCTVVGGFYEENFKAEG----YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAI 304
++L+K++++G+ + C GE ++GA ++ + +G P + +Y+ +
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 305 DLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV 364
L + E + L +M +G P Y +A K GMV A ++ + + G FV
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FV 353
Query: 365 PTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P Y L+ GLC G + A+ ++ + + K G N Y L+ GL G LEA+
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++ EM + P V+T+N+L+ GLC +G +A ++ MIS+ PDI ++ L+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 216/478 (45%), Gaps = 42/478 (8%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ +L +S + +V +M+ F ++++ + + + A+ L N+S
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C ++ T++ +E+ + LF + V + + N L+ VLC+
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML-ASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
+ ++ +G P+ +Y++ ++GLC L+ A ++ + ++G D++
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVIT 288
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L++ LC K Q+A L K++ +GL+ P S + + G ++ A+ ++ +A
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLE-PDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G +P +Y ++ L +EG + +E KG P++++Y + L GM+
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG-----NSAVAVMYLK----------- 391
EA ++ E KG +P V+ +NIL+ GLC G + V VM K
Sbjct: 408 LEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 392 ---------KMSKQV---------GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
KM + G + TY L++GLC+ +F + + M+ +
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLN 491
P + T+N+L+ LC K EA+ LEEM +++ PD + +L+ C N DL+
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN-GDLD 583
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 210/510 (41%), Gaps = 48/510 (9%)
Query: 31 FKEAKEKYPNYRHNG---PVYASMIGILS--ESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F +A + Y R G VY+ I + S +++R +++ M CE + T
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
+ + E LF + +FN LL+ + K+ ++ L L
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL-LDKVIKR 245
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V + + NL + LCQ D A+ + + QG PD +Y+ L+ GLC + + EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK-SRRH 264
L ++ +G D Y TL+ C G +Q A +I+ + G + + R
Sbjct: 306 EVYL----GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
ID C++GE A +L NEAL +G P++ Y+ + L N+G I+E ++ +EM
Sbjct: 362 LIDGL-CHEGE-TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFV-------------------- 364
KG P + + + L K G V +A +++ + KG F
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 365 --------------PTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
P V YN LL GLC + K M ++ GC N T+ IL+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILL 538
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
+ LCR + EA +LEEM +S P T+ LI G C G A +M K+
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 471 PDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+ +++ ++ + K +++
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 222/557 (39%), Gaps = 92/557 (16%)
Query: 7 RLLTPTYLSQIIK-----KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRI 61
R +TP S I+ K P AL++ + N Y +++G E N
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ--GCEMNVVAYCTVVGGFYEENFK 197
Query: 62 TEMKEVIDQM---------------------KGDSCECK---DSV-----------FATA 86
E E+ +M KGD EC+ D V +
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I+ + G+L+ AV + L + ++N L+ + K SK + A + +L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV-YLGKMVNEG 316
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + N L+ C+ LA + + F G PD+ +Y L+ GLC++ N A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++F KG ++++Y TL+ L +QG I +A Q+ ++ KGL P+ + I
Sbjct: 377 ----ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL-IPEVQTFNI 431
Query: 267 ---DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
LC D +G L+ + +G P + +++ + + ++ ++LD M
Sbjct: 432 LVNGLCKMGCVSDADG---LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
G P + Y + L L K ++ +E + + KG P + +NILL+ LC
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC-APNLFTFNILLESLCRYRKL 547
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG-------------------------- 417
A+ L++M K + T+G L+DG C++G
Sbjct: 548 DEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 418 ----RFLE------ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
F E A ++ +EM+ R P TY +++ G C G +L EM+
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 468 AKLPDISVWSSLVASVC 484
+P ++ ++ +C
Sbjct: 667 GFIPSLTTLGRVINCLC 683
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 197/434 (45%), Gaps = 23/434 (5%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L ++++ E + + +M + E + T I Y + G + A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD- 346
Query: 107 SQFNCVNWTQ-SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+ FN Q ++ +L+ + E + A LF G +K + N L+ L
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALF-NEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
A + EM +G P+ ++++IL+ GLC +++A L+ M KG DI
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI----SKGYFPDI 461
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI--DLCPCNDGEDI-EGAKS 282
+ L+ Q K+++A++IL+ +L G+ + + LC + ED+ E K+
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
++ +G P+L +++ + L ++ E +L+EM+ K P V + +
Sbjct: 522 MVE----KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 343 KDGMVDEALEV---IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
K+G +D A + +EE + PT YNI++ + N +A ++M + C
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDR--C 632
Query: 400 VA-NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ +G TY ++VDG C+ G + L EM+ + P + T +I LC + YEA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 459 MWLEEMISQAKLPD 472
+ M+ + +P+
Sbjct: 693 GIIHRMVQKGLVPE 706
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
+G++ E V + M P++ Y A ++ L G D+A +V +G P V
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-ITPDVY 147
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG---------------- 412
+ I +K C A+ L MS Q GC N Y +V G
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 413 -------------------LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
LC+ G E ++L++++ R P + TYN+ I+GLC G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
AV + +I Q PD+ +++L+ +C N+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 44/342 (12%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
AL +F EA K + N +Y ++I LS I E ++ ++M + F
Sbjct: 375 ALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + G +++A L K + +FN L+ + K+E A + L
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA-LEILDVMLDNG 491
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + N L++ LC+ + + + ++ M +GC P+ +++IL++ LC R+L+EA
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK--------- 257
LL M K D V + TL+ C G + A + K + + K
Sbjct: 552 GLLEEM----KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK-MEEAYKVSSSTPTYN 606
Query: 258 --------------APKSRRHRIDLCPCNDG-------------EDIEGAKSLINEALIR 290
A K + +D C DG ++ + E +
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
G IPSL + + L E R+ E ++ M KG P V
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 225/470 (47%), Gaps = 15/470 (3%)
Query: 22 KSPLTAL---KIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCEC 78
++PL A K+FK A K +++ +SMI + S +++++ +++ ++
Sbjct: 52 ENPLEAPISEKMFKSA-PKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110
Query: 79 KDSVFATAIRTYARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
+ F R Y +A ++AV LF + +F C +SFN++L ++ E
Sbjct: 111 IERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170
Query: 138 F---LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
+ + S + S NL++ LC+ R D A+ VF+ M + C PD +Y LM
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
GLC + R++EA LL M +G VIY L+ LC +G + ++++ + K
Sbjct: 231 GLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G + + + C G+ ++ A SL+ + IP+ +Y + L + R +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++L M +G+ + +Y ++ LFK+G +EA+ + + KG P + VY++L+
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 404
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
GLC G A L +M GC+ N TY L+ G + G EA +V +EM
Sbjct: 405 DGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
Y+VLI GLC +G+ EA+M +M++ PD +SS++ +C
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 192/472 (40%), Gaps = 38/472 (8%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N NG + +I L + + EV M C + T + + +++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL----FLRSCYGWEVKSRIQSLN 155
V L + C +N L+ + K+ L L FL+ C EV + N
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV-----TYN 296
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWR 215
L+ LC + D A+ + + M C P+ +Y L+ GL RR +A LL SM
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM--- 353
Query: 216 ISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE 275
++G + IY L+ L +GK ++AM + K+ KG K + C +G+
Sbjct: 354 -EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
E AK ++N + G +P+ +YS++ + G E +V EM G + Y
Sbjct: 413 PNE-AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-- 393
+ L G V EA+ V + + G P Y+ ++KGLC G+ A+ +M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL----- 448
++ + TY IL+DGLC A +L ML R P V T N + L
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 449 -CSIGKQY---------------EAVMWLEEMISQAKLPDISVWSSLVASVC 484
C G+ + A +E M+ + P S W+ +V +C
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T L + KQ+ A+++ +E+ Y N +Y+ +I L + + E
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEER--GYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ +M C+ V++ + R G+ NEA + + C+ ++++L+K
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K E A ++ +++ ++L+D LC R A+ V+ +M G PD
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKF-CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y ++KGLC ++ A L + M + K S D+V Y LL LC Q I A+
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK-SQPDVVTYNILLDGLCMQKDISRAV 560
Query: 246 QILEKILRKG 255
+L +L +G
Sbjct: 561 DLLNSMLDRG 570
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 221/454 (48%), Gaps = 18/454 (3%)
Query: 1 MSVRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPN-YRHNGPVYASMIGILSESN 59
M +W + +TP+ + ++++ +K ++ +F A +Y N Y H+ + M+ L +N
Sbjct: 6 MMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSAN 65
Query: 60 RITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFN 119
+ +++I +MK ++C + + + R Y R + +++ +F + F+C +++
Sbjct: 66 KFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 120 TLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS-DLALHVFQEMD 178
T+L +V+E++L A F ++ + + SLN+L+ LC+ + D L +F EM
Sbjct: 126 TVLAILVEENQLNLA-FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
+GC PD +Y L+ GLC R++EA L F + +K +V Y +L+ LC
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKL----FTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLAS 298
+ +AM+ LE++ KG++ + C DG ++ A L + RG P++ +
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVT 299
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + L E +I E ++LD M +G P +Y ++ EA + +EM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL-DEM 358
Query: 359 VKGTFVPT-------VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVD 411
+ G P V+ N +++GLC S +YL S+ G ET LV
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSR--GISVEVETLESLVK 416
Query: 412 GLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
LC+ G F +A ++++E++ P T+ +LI
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 163/373 (43%), Gaps = 56/373 (15%)
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR------ 165
V+ SF ++ +V +K +AA L +R ++++ + S ++L+ + CR
Sbjct: 48 VHDQSSFGYMVLRLVSANKFKAAEDLIVR----MKIENCVVSEDILLSI---CRGYGRVH 100
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R +L VF +M C P +++Y ++ L + +LN L + + + + G +
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLN----LAFKFYKNMREIGLPPTV 156
Query: 226 VIYRTLLFALC-DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
L+ ALC + G + ++I L+ PK
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIF-------LEMPK------------------------ 185
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
RG P +Y + L GRI E K+ EM K P++V Y + + L
Sbjct: 186 -----RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE 404
VDEA+ +EE KG P V Y+ L+ GLC G S A M L +M GC N
Sbjct: 241 KNVDEAMRYLEEMKSKG-IEPNVFTYSSLMDGLCKDGRSLQA-MELFEMMMARGCRPNMV 298
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TY L+ GLC++ + EA +L+ M ++ P Y +I G C+I K EA +L+EM
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 465 ISQAKLPDISVWS 477
I P+ W+
Sbjct: 359 ILGGITPNRLTWN 371
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 294 PSLASYSAMAIDL-YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALE 352
P++AS + + L N+G + G K+ EM +G P Y ++ L + G +DEA +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
+ E MV+ PTV Y L+ GLC + N A+ YL++M K G N TY L+DG
Sbjct: 214 LFTE-MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYSSLMDG 271
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
LC+DGR L+A + E M+ R P + TY LI GLC K EAV L+ M Q PD
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 473 ISVWSSLVASVC 484
++ +++ C
Sbjct: 332 AGLYGKVISGFC 343
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+V +M+ PS Y LA L ++ ++ A + + M + PTV N+L+K
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKA 165
Query: 377 LC-DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC + G + +M K+ GC + TYG L+ GLCR GR EA ++ EM+ +
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKR-GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P V TY LI GLC EA+ +LEEM S+ P++ +SSL+ +C
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 11/211 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P + T + L + K L A+++F+ + R N Y ++I L + +I E
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS----QFNCVNWT---QSF 118
E++D+M + ++ I + + EA + + N + W ++
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N +++ + A + G V+ +++L L+ LC+ A+ + E+
Sbjct: 378 NEVVRGLCANYPSRAFTLYLSMRSRGISVE--VETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
GC P + ++ +L+ + + EA+ L
Sbjct: 436 TDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 243/558 (43%), Gaps = 90/558 (16%)
Query: 3 VRWPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRIT 62
V +P+ L+P ++ +++K +K+P A +F A ++P Y H+ VY ++ LSE+ +
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSAT-RHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 63 EMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTL 121
+ +++ ++ C+C + V + I+TY + ++A+ +FK + + F C +S+NTL
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 122 LKEMVKESKLEAAHILFLRSCYGW----EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEM 177
L V EA + + S + + V +Q+ N+L+ + C+ + + A M
Sbjct: 121 LNAFV-----EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 178 DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCD 237
+G PD SY ++ L +L++A L F +S++G D+ Y L+
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALEL----FDEMSERGVAPDVTCYNILIDGFLK 231
Query: 238 QGKIQDAMQILEKILRKGLKAPKSRRH-----------RIDLCP---------------- 270
+ + AM++ +++L P + H R+D C
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 271 ---------CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
C+ G +++ A+S+ NE R + +Y+ M G+I E ++
Sbjct: 292 TYSSLIHGLCDAG-NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M K ++V Y + L ++G +DEA + KG + Y I + GLC G
Sbjct: 351 MEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKG-YAADKTTYGIFIHGLCVNG 408
Query: 382 --NSAVAVM---------------------------------YLKKMSKQVGCVANGETY 406
N A+ VM +K+MSK G N
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH-GVELNSHVC 467
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
L+ GL RD R EAS L EM P V +YN+LI GLC GK EA +++EM+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 467 QAKLPDISVWSSLVASVC 484
PD+ +S L+ +C
Sbjct: 528 NGWKPDLKTYSILLCGLC 545
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 214/491 (43%), Gaps = 37/491 (7%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECK 79
KQ + +L + E PN + Y +I + + + + +D M + +
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFL 139
++T I A+AG+L++A+ LF +S+ +N L+ +KE + A L+
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
R V +++ N+++ L +C R D L +++ M D +Y L+ GLC+
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 200 RRLNEATHLLYSM------------------------------FWRISQKGSGEDIVIYR 229
+++A + + WRI + + +IV Y
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ L + GKI +A I + KG A K+ C +G + A ++ E
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY-VNKALGVMQEVES 422
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
GG + +Y+++ L + R+ E ++ EM G + + A + L +D + E
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A EM K PTV YNIL+ GLC AG A ++K+M + G + +TY IL
Sbjct: 483 A-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSIL 540
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
+ GLCRD + A + + L V +N+LI GLCS+GK +A+ + M +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 470 LPDISVWSSLV 480
++ +++L+
Sbjct: 601 TANLVTYNTLM 611
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 215/468 (45%), Gaps = 18/468 (3%)
Query: 20 KQKSPLTALKIFK---EAKEKYPNYR-HNGPVYASMIGILSESNRITEMKEVIDQMKGDS 75
K+K TA++++ E YPN + HN MI LS+ R+ + ++ ++MK +
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHN-----IMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 76 CECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAH 135
E +++ I AG +++A S+F L + ++NT+L + K++ +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES- 344
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
L L + I S N+L+ L + + D A +++ M +G D+ +Y I + G
Sbjct: 345 -LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC + +N+A ++ + G D+ Y +++ LC + ++++A +++++ + G
Sbjct: 404 LCVNGYVNKALGVMQ----EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
++ + + D E A + E G P++ SY+ + L G+ E
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGE-ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM G+ P L Y L L +D +D ALE+ + + G V ++NIL+
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG-LETDVMMHNILIH 577
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
GLC G A+ + M + C AN TY L++G + G A+ + M
Sbjct: 578 GLCSVGKLDDAMTVMANMEHR-NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P + +YN +++GLC A+ + ++ + P + W+ LV +V
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 10/321 (3%)
Query: 168 DLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL VF+ M + GC P SY+ L+ ++ + S+F G ++
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVE----SLFAYFETAGVAPNLQ 150
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ C + + + A L+ + ++G K P + + ++ A L +E
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
RG P + Y+ + E ++ D + +P++ + ++ L K G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
VD+ L+ I E M + + Y+ L+ GLCDAGN A ++ ++ + + T
Sbjct: 270 RVDDCLK-IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI-DVVT 327
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y ++ G CR G+ E+ + M ++ V +YN+LI+GL GK EA M M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNILIKGLLENGKIDEATMIWRLMP 386
Query: 466 SQAKLPDISVWSSLVASVCCN 486
++ D + + + +C N
Sbjct: 387 AKGYAADKTTYGIFIHGLCVN 407
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I G+L++A+++ N+ NC ++NTL++ K A +++ Y
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW-GYMYKMG 634
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
++ I S N +M LC CR A+ F + G +P +++IL++ + N
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 220/468 (47%), Gaps = 9/468 (1%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
++ Q AL++F A +K PN+ +Y ++ L S +MK++++ MK CE
Sbjct: 57 LRSQPDDSAALRLFNLASKK-PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCE 115
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFK-NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHI 136
S F I +YA+ +E +S+ + +F T +N +L +V + L+ I
Sbjct: 116 MGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
+ W +K + + N+L+ LC+ + A+ + ++M G PD +++ +M+G
Sbjct: 176 SHAKMSV-WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ L+ A + M + G V ++ C +G+++DA+ ++++ +
Sbjct: 235 IEEGDLDGALRIREQMV----EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
P + ++ A +++ L G P + +Y+++ L G + E
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
+VLD+M T+ P+ V Y ++ L K+ V+EA E+ KG +P V +N L++G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQG 409
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC N VA+ ++M + GC + TY +L+D LC G+ EA +L++M +
Sbjct: 410 LCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V TYN LI G C K EA +EM + +++L+ +C
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 204/413 (49%), Gaps = 25/413 (6%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S F I+ RA QL A+ + +++ + V ++F T+++ ++E L+ A L +R
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA--LRIR 247
Query: 141 ------SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQ-GCYPDRESYHILM 193
C V S+N+++ C+ R + AL+ QEM Q G +PD+ +++ L+
Sbjct: 248 EQMVEFGCSWSNV-----SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 194 KGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR 253
GLC + A ++ M Q+G D+ Y +++ LC G++++A+++L++++
Sbjct: 303 NGLCKAGHVKHAIEIMDVML----QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 254 KGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAM--AIDLYNEGR 311
+ +P + + + +E A L +G +P + +++++ + L R
Sbjct: 359 RDC-SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 312 IVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYN 371
+ ++ +EMR+KG P Y + +L G +DEAL ++++ + G +V YN
Sbjct: 418 VAM--ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC-ARSVITYN 474
Query: 372 ILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLI 431
L+ G C A + A +M G N TY L+DGLC+ R +A++++++M++
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 432 RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P TYN L+ C G +A ++ M S PDI + +L++ +C
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 203/426 (47%), Gaps = 17/426 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ +++ L ++ + E++D M + + + + I + G++ EAV + +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+C T ++NTL+ + KE+++E A L R + + + N L+ LC R
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+A+ +F+EM +GC PD +Y++L+ LC+ +L+EA ++L M G ++
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM----ELSGCARSVI 471
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDG----EDIEGAKS 282
Y TL+ C K ++A +I +++ G+ R+ + DG +E A
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVS-----RNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ ++ G P +Y+++ G I + ++ M + G P +V Y ++ L
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K G V+ A +++ +KG + T YN +++GL + A+ ++M +Q +
Sbjct: 587 KAGRVEVASKLLRSIQMKGINL-TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Query: 403 GETYGILVDGLCRDGRFL-EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
+Y I+ GLC G + EA L E+L + + P + +L GL ++ + E ++ L
Sbjct: 646 AVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME-ETLVKL 704
Query: 462 EEMISQ 467
M+ Q
Sbjct: 705 VNMVMQ 710
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 201/443 (45%), Gaps = 44/443 (9%)
Query: 80 DSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ-SFNTLLKEMVKESKLEAA---- 134
+ F T ++ Y G L+ A+ + + + +F C +W+ S N ++ KE ++E A
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 135 ----------------HILFLRSCYGWEVKSRIQSLNLLM------DV---------LCQ 163
+ L C VK I+ +++++ DV LC+
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ V +M + C P+ +Y+ L+ LC + ++ EAT L + + KG
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILP 398
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
D+ + +L+ LC + AM++ E++ KG + + + + C+ G+ ++ A ++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNM 457
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + + G S+ +Y+ + + E +++ DEM G + V Y + L K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V++A +++++ +++G P YN LL C G+ A ++ M+ GC +
Sbjct: 518 SRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDI 575
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TYG L+ GLC+ GR AS++L + ++ YN +I+GL K EA+ E
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+ Q + P +V +V CN
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCN 658
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L +S R+ + +++DQM + + + + + + R G + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ C ++ TL+ + K ++E A L LRS + + N ++ L +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL-LRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 164 CRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCN 198
R++ A+++F+EM Q PD SY I+ +GLCN
Sbjct: 623 KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 204/434 (47%), Gaps = 44/434 (10%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMIG+L ++NR+ E E+ + ++ + + T I Y AG+ +EA SL +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N +L + K K++ A +F + + + N+L+D+LC+ +
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE--MKKDAAPNLSTYNILIDMLCRAGK 392
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A + M G +P+ + +I++ LC ++L+EA +MF + K D +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC----AMFEEMDYKVCTPDEI 448
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
+ +L+ L G++ DA ++ EK+L C N S++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSD-------------CRTN---------SIVYT 486
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+LI+ + +N GR +G K+ +M + P L + + +FK G
Sbjct: 487 SLIK--------------NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++ + EE + FVP R Y+IL+ GL AG + M +Q GCV + Y
Sbjct: 533 PEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDTRAY 590
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
I++DG C+ G+ +A ++LEEM + + P V TY +I GL I + EA M EE S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 467 QAKLPDISVWSSLV 480
+ ++ ++SSL+
Sbjct: 651 KRIELNVVIYSSLI 664
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 192/443 (43%), Gaps = 47/443 (10%)
Query: 38 YPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLN 97
+PN R M+ L +S ++ E + ++M C + F + I + G+++
Sbjct: 409 FPNVR----TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 98 EAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLL 157
+A +++ + +C + + +L+K + E H ++ + +Q LN
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY-KDMINQNCSPDLQLLNTY 523
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRIS 217
MD + + + +F+E+ + PD SY IL+ GL NE L YSM
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM----K 579
Query: 218 QKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDI 277
++G D Y ++ C GK+ A Q+LE++ KG +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE-------------------- 619
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
P++ +Y ++ L R+ E + +E ++K ++V+Y +
Sbjct: 620 ----------------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ K G +DEA ++EE M KG P + +N LL L A A++ + M K++
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQSM-KEL 721
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
C N TYGIL++GLC+ +F +A +EM + P +Y +I GL G EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ + +PD + +++++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMI 804
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 181/422 (42%), Gaps = 44/422 (10%)
Query: 57 ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQ 116
++N++ E +V+ M+ S + T I ++ + ++LF+ + +
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
F TL++ KE ++++A + L + + I N+ +D + + D+A F E
Sbjct: 205 LFTTLIRGFAKEGRVDSA-LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
++ G PD +Y ++ LC RL+EA MF + + Y T++
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVE----MFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK +A +LE R R +G IPS+
Sbjct: 320 SAGKFDEAYSLLE-------------RQR-----------------------AKGSIPSV 343
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+Y+ + L G++ E KV +EM+ K P+L Y + L + G +D A E + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE-LRD 401
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M K P VR NI++ LC + A ++M +V C + T+ L+DGL +
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCSLIDGLGKV 460
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
GR +A +V E+ML Y LI+ + G++ + ++MI+Q PD+ +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 477 SS 478
++
Sbjct: 521 NT 522
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 143/393 (36%), Gaps = 92/393 (23%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S+I L + R+ + +V ++M C V+ + I+ + G+ + ++K++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR-----IQSLNLLMDVL 161
NC Q NT + M K + E +F E+K+R +S ++L+ L
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF------EEIKARRFVPDARSYSILIHGL 562
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL------------ 209
+ ++ +F M QGC D +Y+I++ G C ++N+A LL
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 210 -------------------YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK 250
Y +F K ++VIY +L+ G+I +A ILE+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 251 ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI--------------------- 289
+++KGL +L N D INEAL+
Sbjct: 683 LMQKGLTP--------NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 290 ---------------------RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
+G PS SY+ M L G I E + D + G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
P Y A + L +A + EE +G
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D++L EM GF PS+ + K + E +V++ M K F P Y L+
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM-MRKFKFRPAFSAYTTLIG 176
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
+S + + ++M +++G + L+ G ++GR A +L+EM S
Sbjct: 177 AFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ YNV I +GK A + E+ + PD ++S++ +C
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 216/474 (45%), Gaps = 15/474 (3%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
+TP L ++++ + T++++F + YRH+ VY +IG L + + ++
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQ-NGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ-FNCVNWTQSFNTLLKEMVK 127
QMK + K+S+F + +R Y +AG + L + ++C +S+N +L+ +V
Sbjct: 135 IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVS 194
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
+ + A +F ++ + + ++M C D AL + ++M GC P+
Sbjct: 195 GNCHKVAANVFY-DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
Y L+ L R+NEA LL MF G D + ++ LC +I +A ++
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFL----MGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
+ ++L +G + C G ++ AK L R P + ++ +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDL----FYRIPKPEIVIFNTLIHGFV 364
Query: 308 NEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
GR+ + VL +M T G P + Y + + +K+G+V ALEV+ + KG P
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPN 423
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V Y IL+ G C G A L +MS G N + L+ C++ R EA +
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 427 EEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EM + P V T+N LI GLC + + A+ L +MIS+ + + +++L+
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 204/429 (47%), Gaps = 11/429 (2%)
Query: 55 LSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNW 114
L + +RI E +++++M D + + + G+++ A LF + + V
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV-- 354
Query: 115 TQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVF 174
FNTL+ V +L+ A + + + + + N L+ + LAL V
Sbjct: 355 --IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 175 QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFA 234
+M +GC P+ SY IL+ G C +++EA ++L M S G + V + L+ A
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM----SADGLKPNTVGFNCLISA 468
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
C + +I +A++I ++ RKG K + + C + ++I+ A L+ + + G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVA 527
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
+ +Y+ + G I E K+++EM +G + Y + + L + G VD+A +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E+ M++ P+ NIL+ GLC +G AV + K+M + G + T+ L++GLC
Sbjct: 588 EK-MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLC 645
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R GR + + ++ P T+N L+ LC G Y+A + L+E I +P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 475 VWSSLVASV 483
WS L+ S+
Sbjct: 706 TWSILLQSI 714
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 13/442 (2%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N +Y ++I LS+ NR+ E +++++M C F I + ++NEA +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ L+ + K +++AA LF R K I N L+
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVT 365
Query: 164 CRRSDLALHVFQEM-DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R D A V +M G PD +Y+ L+ G + + A +L+ M KG
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM----RNKGCK 421
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++ Y L+ C GKI +A +L ++ GLK P + + I A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVE 480
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ E +G P + +++++ L I +L +M ++G + V Y + A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+ G + EA +++ E + +G+ + + YN L+KGLC AG A +KM + G +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPS 598
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
+ IL++GLCR G EA +EM++R P + T+N LI GLC G+ + +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 463 EMISQAKLPDISVWSSLVASVC 484
++ ++ PD +++L++ +C
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLC 680
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+M+ PT+ + +++K C A+ L+ M+K GCV N Y L+ L +
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH-GCVPNSVIYQTLIHSLSKC 265
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
R EA ++LEEM + P ET+N +I GLC + EA + M+ + PD +
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 477 SSLVASVC 484
L+ +C
Sbjct: 326 GYLMNGLC 333
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 202/415 (48%), Gaps = 15/415 (3%)
Query: 74 DSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEA 133
D C SVF +++Y+R +++A+S+ + S+N +L ++ +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR--- 184
Query: 134 AHILFLRSCYGWEVKSRIQ----SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESY 189
+I F + + ++S++ + N+L+ C D+AL +F +M+ +GC P+ +Y
Sbjct: 185 -NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 190 HILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
+ L+ G C R++++ LL SM + KG +++ Y ++ LC +G++++ +L
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSM----ALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
++ R+G + + + C +G + A + E L G PS+ +Y+++ +
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 310 GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV 369
G + + LD+MR +G P+ Y + + G ++EA V+ E M F P+V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE-MNDNGFSPSVVT 417
Query: 370 YNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEM 429
YN L+ G C G A+ L+ M K+ G + +Y ++ G CR EA RV EM
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 430 LIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ + P TY+ LI+G C + EA EEM+ PD +++L+ + C
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 195/400 (48%), Gaps = 9/400 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
IR + AG ++ A++LF + C+ ++NTL+ K K++ L LRS
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL-LRSMALKG 270
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
++ + S N++++ LC+ R V EM+ +G D +Y+ L+KG C + ++A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA- 329
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
M + + G ++ Y +L+ ++C G + AM+ L+++ +GL P R +
Sbjct: 330 ---LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL-CPNERTYTT 385
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ + + A ++ E G PS+ +Y+A+ G++ + VL++M+ KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P +V Y L+ + VDEAL V + EMV+ P Y+ L++G C+ + A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++M + VG + TY L++ C +G +A ++ EM+ + P V TY+VLI
Sbjct: 505 CDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
GL + EA L ++ + +P + +L+ + C N
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN 602
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 23/416 (5%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
+ I R G++ E + +++ ++NTL+K KE A ++
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
S I +L+ +C+ + A+ +M +G P+ +Y L+ G +
Sbjct: 338 RHGLTPSVITYTSLIHS-MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
NEA Y + ++ G +V Y L+ C GK++DA+ +LE + KGL +P
Sbjct: 397 NEA----YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL-SPDVV 451
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ L D++ A + E + +G P +YS++ + R E + +EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P Y A + A +G +++AL+ + EMV+ +P V Y++L+ GL
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQ-LHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVD---------------GLCRDGRFLEASRVLE 427
+ A L K+ + V + TY L++ G C G EA +V E
Sbjct: 571 TREAKRLLLKLFYE-ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 428 EMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
ML +++ P YN++I G C G +A +EM+ L +LV ++
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+ GF P ++ Y A L A + E + +EM++ P V YNIL++G C AGN
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDG------------------------------ 412
VA+ KM + GC+ N TY L+DG
Sbjct: 221 IDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 413 -----LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
LCR+GR E S VL EM R Y TYN LI+G C G ++A++ EM+
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 468 AKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
P + ++SL+ S+ C ++N + L+Q+
Sbjct: 340 GLTPSVITYTSLIHSM-CKAGNMNRAMEFLDQM 371
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 177/426 (41%), Gaps = 28/426 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + ++ + E +DQM+ + + T + +++ G +NEA + + +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ ++N L+ K+E A I L + + S + ++ C+
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDA-IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D AL V +EM +G PD +Y L++G C RR EA LY R+ G D
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD-LYEEMLRV---GLPPDEF 521
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ A C +G ++ A+Q+ +++ KG+ P + + + N AK L+ +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGV-LPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
+PS +Y + + N +E V+ + KGF GM
Sbjct: 581 LFYEESVPSDVTYHTLIENCSN----IEFKSVVSLI--KGFC--------------MKGM 620
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+ EA +V E M+ P YNI++ G C AG+ A K+M K G + + T
Sbjct: 621 MTEADQVF-ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVTV 678
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LV L ++G+ E + V+ +L E VL+ G + L EM
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 467 QAKLPD 472
LP+
Sbjct: 739 DGFLPN 744
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R+ + + N+A++LF ++++ + + F+ LL + K +K EA LF R
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLF-RHLEMLG 109
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + S L+D C+C R LAL +M G P ++ L+ G C+ R EA
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
S+ +I G ++VIY T++ +LC++G++ A+ +L+ + + G++ + +
Sbjct: 170 ----SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMAIDLYN-EGRIVEGDKVLDEMRT 324
+ G G + I ++R GI P + ++SA+ ID+Y EG+++E K +EM
Sbjct: 226 ITRLFHSGT--WGVSARILSDMMRMGISPDVITFSAL-IDVYGKEGQLLEAKKQYNEMIQ 282
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+ P++V Y + + L G++DEA +V+ + KG F P YN L+ G C A
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVD 341
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ L MS+ G + TY L G C+ G+F A +VL M+ P + T+N+L
Sbjct: 342 DGMKILCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC GK +A++ LE++ + I ++ ++ +C
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 11/316 (3%)
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
L+L + F G R Y ++ + + N+A ++F +++ IV +
Sbjct: 31 LSLRICNSRAFSG----RSDYRERLRSGLHSIKFNDAL----TLFCDMAESHPLPSIVDF 82
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
LL A+ K + + + + G+ + C C + A S + + +
Sbjct: 83 SRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR-LSLALSCLGKMM 141
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
G PS+ ++ ++ + R E ++D++ G+ P++V+Y + +L + G V+
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
AL+V++ M K P V YN L+ L +G V+ L M + +G + T+
Sbjct: 202 TALDVLKH-MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR-MGISPDVITFSA 259
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+D ++G+ LEA + EM+ RS P + TYN LI GLC G EA L ++S+
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 469 KLPDISVWSSLVASVC 484
P+ +++L+ C
Sbjct: 320 FFPNAVTYNTLINGYC 335
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 134/333 (40%), Gaps = 42/333 (12%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S++ NR E ++DQ+ G E ++ T I + GQ+N A+ + K++
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ ++N+L+ + S L + + + + L+DV + +
Sbjct: 212 KMGIRPDVVTYNSLITRLF-HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A + EM + P+ +Y+ L+ GLC L+EA +L + KG + V
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV----SKGFFPNAVT 326
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ C ++ D M+IL + R G+ DG+
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGV----------------DGDTF---------- 360
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+Y+ + G+ +KVL M + G P + + L L G +
Sbjct: 361 ----------TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
+AL V E++ K V + YNI++KGLC A
Sbjct: 411 GKAL-VRLEDLQKSKTVVGIITYNIIIKGLCKA 442
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 211/460 (45%), Gaps = 47/460 (10%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
WP+ L P L +I +Q++ AL+IF A + +P + HN Y S++ LS + +
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 65 KEVIDQMKGD--SCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLL 122
+ ++ ++ +C +++F +R Y AG+ ++ +F + F +S NTLL
Sbjct: 103 ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 123 KEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ------------------- 163
+++ + + H +F S + + I + NLL+ LC+
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 164 --------------CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
R D+ A V +EM +G YPD +Y +LM G C R +EA
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 208 LLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++ M +K E + V Y ++ ALC + K +A + +++L + S ++
Sbjct: 283 VMDDM-----EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
C D ++ A L + L +P A S + L EGR+ E K+ DE KG
Sbjct: 338 IDALCED-HKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KG 395
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
PSL+ Y +A + + G + EA + ++M + P YN+L++GL GN
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGR-LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V L++M ++GC N T+ IL +GL + G+ +A +++
Sbjct: 455 VRVLEEML-EIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 8/331 (2%)
Query: 157 LMDVLCQCRRSDLALHVF--QEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFW 214
L+ ++ Q + DLAL +F G + ++YH ++ L R + L+ +
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN 111
Query: 215 RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK-APKSRRHRIDLCPCND 273
GE++ I + L G+ + +M+I +I G+K + +S +++ N
Sbjct: 112 SYPPIKCGENLFIDLLRNYGLA--GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
D+ A N G P++ + + + L + I KVLDE+ + G P+LV
Sbjct: 170 RFDLVHA-MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y L G ++ A V+EE + +G + P Y +L+ G C G + A + M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWY-PDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
K N TYG+++ LC++ + EA + +EML RS+ P +I LC K
Sbjct: 288 EKN-EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA +M+ +PD ++ S+L+ +C
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 225/475 (47%), Gaps = 31/475 (6%)
Query: 9 LTPTYLSQIIKKQKSPLT-ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P + +++ + ++ LT + + +PN++H ++MI IL S R+++ +
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ +M S + + + T++ G N++V F+ L++ V+
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGS-NDSV-----------------FDLLIRTYVQ 177
Query: 128 ESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
KL AH F LRS G+ V I + N L+ L + +LA V+QE+ G +
Sbjct: 178 ARKLREAHEAFTLLRS-KGFTVS--IDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+ +I++ LC D ++ + L ++ +KG DIV Y TL+ A +G +++A
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFL----SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+++ + KG + + C G+ E AK + E L G P +Y ++ ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGK-YERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
+G +VE +KV +MR++ P LV + + ++ + G +D+AL G +P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG-LIP 408
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+Y IL++G C G +VA M L+ Q GC + TY ++ GLC+ EA ++
Sbjct: 409 DNVIYTILIQGYCRKGMISVA-MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EM R+ +P T +LI G C +G A+ ++M + D+ +++L+
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 201/438 (45%), Gaps = 30/438 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I L + + KEV +M + + + + + G + E +F ++
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--C 164
+ V F++++ + L+ A +++ S ++ + N++ +L Q C
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVK----EAGLIPDNVIYTILIQGYC 421
Query: 165 RRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
R+ +A+++ EM QGC D +Y+ ++ GLC + L EA L F ++++
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL----FNEMTERALF 477
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN---DG----E 275
D L+ C G +Q+AM++ +K+ K +R R+D+ N DG
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKM--------KEKRIRLDVVTYNTLLDGFGKVG 529
Query: 276 DIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
DI+ AK + + + + +P+ SYS + L ++G + E +V DEM +K P++++
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 336 AKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
+ + + G + E E+M+ FVP YN L+ G N + A +KKM +
Sbjct: 590 SMIKGYCRSGNASDG-ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 396 -QVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
Q G V + TY ++ G CR + EA VL +M+ R P TY +I G S
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 455 YEAVMWLEEMISQAKLPD 472
EA +EM+ + PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 195/442 (44%), Gaps = 22/442 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I S + E E+++ M G + T I + G+ A +F +
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++ +LL E K+ + +F +RS +V + + +M + +
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS---RDVVPDLVCFSSMMSLFTRS 388
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
D AL F + G PD Y IL++G C ++ A +L M Q+G D
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML----QQGCAMD 444
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGE----DIEGA 280
+V Y T+L LC + + +A ++ ++ + L P S I + DG +++ A
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILI----DGHCKLGNLQNA 499
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
L + + + +Y+ + G I ++ +M +K P+ + Y + A
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L G + EA V +E M+ PTV + N ++KG C +GN++ +L+KM + G V
Sbjct: 560 LCSKGHLAEAFRVWDE-MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFV 617
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIR--SYWPCVETYNVLIRGLCSIGKQYEAV 458
+ +Y L+ G R+ +A ++++M P V TYN ++ G C + EA
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
+ L +MI + PD S ++ ++
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMI 699
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 222/489 (45%), Gaps = 24/489 (4%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
++ T + Q ++ K P L+ F K + H + M+ L + + + +
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNK--GFSHKEQSFFLMLEFLGRARNLNVARNFL 123
Query: 69 DQMKGDSCEC---KDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ S C +D F + IR+Y AG E+V LF+ + Q +FN+LL +
Sbjct: 124 FSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 126 VKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
+K + AH LF +R YG V + N L++ C+ D A +F++M+ C
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYG--VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN 241
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ ++ GLC ++ A ++L M + + ++V Y TL+ C + +I +
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD--VHPNVVSYTTLVRGYCMKQEIDE 299
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI---NEALIRGGIPSLASYS 300
A+ + +L +GLK P + + + ++ + K ++ N+A P +++
Sbjct: 300 AVLVFHDMLSRGLK-PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA-PDACTFN 357
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEAL----EVIEE 356
+ + G + KV EM P Y + L D A E+ E+
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 357 EMVKGT--FVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
E++ G P YN + + LC G + A +++ K+ V + +Y L+ G C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR--GVQDPPSYKTLITGHC 475
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
R+G+F A +L ML R + P +ETY +LI GL IG+ A L+ M+ + LP +
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 475 VWSSLVASV 483
+ S++A +
Sbjct: 536 TFHSVLAEL 544
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 188/448 (41%), Gaps = 21/448 (4%)
Query: 27 ALKIFKEAKEKYPNYRHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV- 82
A +IFK+ E Y H P Y ++I L + ++ V+ M + + +V
Sbjct: 228 AFRIFKDM-ELY----HCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 83 -FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLR 140
+ T +R Y +++EAV +F ++ ++NTL+K + + + E IL
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
+ + N+L+ C D A+ VFQEM +PD SY +L++ LC
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 201 RLNEATHLLYSMFWRISQKGSGE---DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ A L +F + G E Y + LC GK + A ++ +++++G++
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P S + I C +G+ + A L+ L R +P L +Y + L G +
Sbjct: 463 DPPSYKTLIT-GHCREGK-FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L M + P + + LA L K +E+ ++ M++ + + +++ L
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL-MLEKRIRQNIDLSTQVVRLL 579
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
+ A + ++ + V E G L C + + L+A ++ L +S
Sbjct: 580 FSSAQKEKAFLIVRLLYDNGYLVKMEELLGYL----CENRKLLDAHTLVLFCLEKSQMVD 635
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMI 465
++T N +I GLC + EA E++
Sbjct: 636 IDTCNTVIEGLCKHKRHSEAFSLYNELV 663
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 79/355 (22%)
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
L F + +G +S+ ++++ L R LN A + L+S+ R + +D +
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQD-RYFN 142
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
+L+ + + G Q+++++ + + + G+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGIS-------------------------------- 170
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR-TKGFWPSLVMYEAKLAALFKDGMVD 348
PS+ +++++ L GR + DEMR T G P + + K+ MVD
Sbjct: 171 ----PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 349 EALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV-ANGETY 406
EA + ++ E+ P V YN ++ GLC AG +A L M K+ V N +Y
Sbjct: 227 EAFRIFKDMELYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIR---------------------------------- 432
LV G C EA V +ML R
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 433 ---SYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++ P T+N+LI+ C G A+ +EM++ PD + +S L+ ++C
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 19/460 (4%)
Query: 24 PLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVF 83
PL AL FK ++H + MI L+ ++ ++ ++ QMK C + +F
Sbjct: 57 PL-ALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF 114
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
+ I Y + G AV +F + +F C + +N +L ++ E++++ ++++ R
Sbjct: 115 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY-RDMK 173
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
+ + + N+L+ LC+ + D A + EM +GC PD SY ++ +C +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 204 EATHLLYSMFWRISQKGSGEDIV-IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
E L E +V +Y L+ LC + + A +++ +++ KG+
Sbjct: 234 EGRELAERF----------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ CN G+ IE A S + + L RG P++ + S++ + G + + ++M
Sbjct: 284 YSTLINVLCNSGQ-IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 323 -RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
R G P++V Y + G + +A+ V M + P +R Y L+ G G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF-SHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ AV KM GC N Y +V+ LCR +F EA ++E M + P V T+
Sbjct: 402 SLDGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLV 480
N I+GLC G+ A +M Q + P+I ++ L+
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 206/484 (42%), Gaps = 54/484 (11%)
Query: 37 KYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTYARAGQ 95
K + N Y ++ L ++N++ K+++ +M C C D+V + T I + G
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC-CPDAVSYTTVISSMCEVGL 231
Query: 96 LNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN 155
+ E L + V +N L+ + KE + A L +R + + S +
Sbjct: 232 VKEGRELAERFEPVVSV-----YNALINGLCKEHDYKGAFEL-MREMVEKGISPNVISYS 285
Query: 156 LLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES--------------------------- 188
L++VLC + +LA +M +GC+P+ +
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 189 ---------YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQG 239
Y+ L++G C+ + +A S+F + + G +I Y +L+ +G
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAV----SVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 240 KIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASY 299
+ A+ I K+L G + C + E A+SLI PS+ ++
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE-AESLIEIMSKENCAPSVPTF 460
Query: 300 SAMAIDLYNEGRIVEGDKVLDEMRTKGFWP-SLVMYEAKLAALFKDGMVDEALEVIEEEM 358
+A L + GR+ +KV +M + P ++V Y L L K ++EA + E
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
++G + YN LL G C+AG +A+ + KM G + T +++ C+ G+
Sbjct: 521 MRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGK 578
Query: 419 FLEASRVLEEMLI--RSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
A+++L+ + R + P V +Y +I GLC + + V+ LE MIS +P I+ W
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 477 SSLV 480
S L+
Sbjct: 639 SVLI 642
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 19/312 (6%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y +++ I + V M+ C + + I +A+ G L+ AV ++
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR------IQSLNLL 157
+ C + +++ + + SK + A L E+ S+ + + N
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI-------EIMSKENCAPSVPTFNAF 463
Query: 158 MDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
+ LC R D A VF++M+ Q C P+ +Y+ L+ GL R+ EA L +F R
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
+ S Y TLL C+ G A+Q++ K++ G + + I L C G+
Sbjct: 524 VEWSSST----YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 277 IEGAKSL-INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
A+ L + R P + SY+ + L +G +L+ M + G PS+ +
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 336 AKLAALFKDGMV 347
+ D +V
Sbjct: 640 VLINCFILDDIV 651
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG------TFVPTVRVYNILLKGLCDA 380
F + + +E + L DG VD ++++ ++G F+ + VY + GL +
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQV--GLAE- 128
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
AV + Y K+ GC + + Y ++D L + R V +M + P V T
Sbjct: 129 --RAVEMFY---RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
YNVL++ LC K A L EM ++ PD ++++++S+C
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 190/399 (47%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I + R QL A+++ + + + ++LL ++ A + + + E
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA-VALVDQMFVME 180
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + N L+ L ++ A+ + M +GC PD +Y ++ GLC ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 207 HLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
LL M +KG E D+VIY T++ ALC+ + DA+ + ++ KG++ +
Sbjct: 241 SLLKKM-----EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C CN G A L+++ + R P++ ++SA+ EG++VE +K+ DEM +
Sbjct: 296 LIRCLCNYGR-WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P + Y + + +DEA + E + K F P V YN L+KG C A
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEE 413
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ ++MS Q G V N TY L+ GL + G A ++ ++M+ P + TY++L+
Sbjct: 414 GMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A++ E + PDI ++ ++ +C
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 204/435 (46%), Gaps = 14/435 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI+E ++DQM + F T I + +EAV+L +
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + ++D LC + +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EMD +G P+ +Y+ L++ LCN R ++A+ LL M ++ ++V +
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 328
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 387
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + R+ EG ++ EM +G + V Y + LF+ G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A ++ ++ MV P + Y+ILL GLC G + V YL+K + + T
Sbjct: 448 MAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PDIYT 502
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V Y +I G C G + EA EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 466 SQAKLPDISVWSSLV 480
LP+ +++L+
Sbjct: 563 EDGTLPNSGTYNTLI 577
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV LF + Q + FN LL + K +K + L R + + S
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER-MQNLRISYDLYSY 118
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS L AL V +M G PD + L+ G C+ +R++EA L+ M
Sbjct: 119 NILIN--CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F Q + V + TL+ L K +A+
Sbjct: 177 FVMEYQPNT----VTFNTLIHGLFLHNKASEAV--------------------------- 205
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+LI+ + RG P L +Y + L G I +L +M +V
Sbjct: 206 ---------ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + AL V++AL + E KG P V YN L++ LC+ G + A L
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 316 MIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +++L+ C
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 18/361 (4%)
Query: 129 SKLEAAHILF-LRSCY----GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCY 183
++L A LF LR Y ++ + ++ S N+L+D+ + D A+ +F EM
Sbjct: 24 AQLRKASPLFSLRGVYFSAASYDYREKL-SRNVLLDL-----KLDDAVDLFGEMVQSRPL 77
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
P ++ L+ + + + L+ S+ R+ D+ Y L+ C + ++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFD----LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL 133
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+ +L K+++ G + + C+ G+ I A +L+++ + P+ +++ +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCH-GKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L+ + E ++D M +G P L Y + L K G +D AL ++++ M KG
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKI 251
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
V +Y ++ LC+ N A+ +M + G N TY L+ LC GR+ +AS
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
R+L +M+ R P V T++ LI GK EA +EMI ++ PDI +SSL+
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 484 C 484
C
Sbjct: 371 C 371
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 148/307 (48%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K+ + A K++ E ++ + + Y+S+I +R+ E K
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ + M C + T I+ + +A ++ E + LF+ +SQ V T ++NTL++ +
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + A +F + V I + ++L+D LC+ + + AL VF+ + PD
Sbjct: 441 FQAGDCDMAQKIF-KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I+++G+C ++ + + +F +S KG +++IY T++ C +G ++A
Sbjct: 500 IYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ ++ G + + DG+ A+ LI E + G AS +M I+
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE-LIKE-MRSCGFVGDASTISMVIN 613
Query: 306 LYNEGRI 312
+ ++GR+
Sbjct: 614 MLHDGRL 620
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 16/289 (5%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I + ++ E +++ D+M S + +++ I + +L+EA +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +C ++NTL+K K ++E LF R + + N L+ L Q
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D+A +F++M G PD +Y IL+ GLC +L +A +F + +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL----VVFEYLQKSKMEP 498
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y ++ +C GK++D + + KG+K + C G E A +L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EEADAL 557
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK-----VLDEMRTKGF 327
E G +P+ +Y+ + R+ +GDK ++ EMR+ GF
Sbjct: 558 FREMKEDGTLPNSGTYNTLI-----RARLRDGDKAASAELIKEMRSCGF 601
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 190/397 (47%), Gaps = 8/397 (2%)
Query: 88 RTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+T R +LN+A+ LF ++ + FN LL +VK K + I + +
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGI 116
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
++ + + N++++ C C + LAL + +M G PDR + L+ G C R+++A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRID 267
L+ M + G DIV Y ++ +LC ++ DA ++I RKG++ +
Sbjct: 177 LVDKMV----EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 268 LCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
CN + A+ L+++ + + P++ +YSA+ G+++E ++ +EM
Sbjct: 233 NGLCNSSRWSDAAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P +V Y + + L +DEA ++ + + KG V YN L+ G C A +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS-YNTLINGFCKAKRVEDGM 350
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++MS Q G V+N TY L+ G + G +A +M P + TYN+L+ G
Sbjct: 351 KLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
LC G+ +A++ E+M + DI +++++ +C
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
K I + N ++D LC+ +R + A F+E++ +G P+ +Y L+ GLCN R ++A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI- 266
LL M +K +++ Y LL A GK+ +A ++ E+++R + +
Sbjct: 247 LLSDMI----KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 267 -DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
LC + I+ A + + + +G + + SY+ + R+ +G K+ EM +
Sbjct: 303 NGLCL---HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G + V Y + F+ G VD+A E + G P + YNILL GLCD G
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEK 418
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ + M K+ + + TY ++ G+C+ G+ EA + + ++ P + TY ++
Sbjct: 419 ALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 446 RGLCSIGKQYEA 457
GLC+ G +E
Sbjct: 478 SGLCTKGLLHEV 489
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 16/291 (5%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K L A ++F+E + + Y+S+I L +RI E
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M C + T I + +A ++ + + LF+ +SQ V+ T ++NTL++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ ++ A F + + + + I + N+L+ LC + AL +F++M + D
Sbjct: 376 FQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y +++G+C ++ EA +S+F +S KG DIV Y T++ LC +G + +
Sbjct: 435 IVTYTTVIRGMCKTGKVEEA----WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
+ K+ ++GL C +DG DI + LI + L G PSL
Sbjct: 491 ALYTKMKQEGLMKND--------CTLSDG-DITLSAELIKKMLSCGYAPSL 532
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 208/432 (48%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ S RI++ ++DQM + F T I + +EAV+L + Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L+ ++++ + N ++D LC+ + D
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLA-LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EMD +G PD +Y L+ LCN R ++A+ LL M ++ ++V +
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI----ERKINPNVVTF 331
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 390
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +YS + R+ EG ++ EM +G + V Y + F+ D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++ ++MV P + YNILL GLC G A A++ + + + + TY I
Sbjct: 451 NA-QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNI 508
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V YN +I G C G + EA L++M
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 569 PLPNSGTYNTLI 580
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 192/439 (43%), Gaps = 45/439 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
++ I + R QL+ A+++ + + + ++LL ++ A + +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA-VALVDQ 178
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
K + L+ L ++ A+ + +M +GC PD +Y ++ GLC
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 202 LNEATHLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
++ A LL M +KG E D+VIY T++ LC + DA+ + ++ KG++
Sbjct: 239 IDLALSLLKKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ C CN G A L+++ + R P++ ++SA+ EG++VE +K+ D
Sbjct: 294 FTYSSLISCLCNYGR-WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
EM + P + Y + + +DEA + E + K F P V Y+ L+KG C A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKA 411
Query: 381 -------------------GNSAV----------------AVMYLKKMSKQVGCVANGET 405
GN+ A M K+M VG N T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILT 470
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y IL+DGLC++G+ +A V E + + P + TYN++I G+C GK + +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 466 SQAKLPDISVWSSLVASVC 484
+ P++ ++++++ C
Sbjct: 531 LKGVSPNVIAYNTMISGFC 549
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 176/393 (44%), Gaps = 16/393 (4%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTL---LKEMVKESKLEAAHILFLRSCYGWEVKSR----I 151
V F NL C W +SF + +E+++ + + +G VKSR I
Sbjct: 26 TVPSFFNLCGSGC--WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSI 83
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
N L+ + + + +L + + ++M G D +Y I + C +L+ A +L
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G DIV +LL C +I DA+ ++++++ G K P + +
Sbjct: 144 MM----KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-PDTFTFTTLIHGL 198
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
A +L+++ + RG P L +Y + L G I +L +M +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V+Y + L K +D+AL + E KG P V Y+ L+ LC+ G + A L
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 318 DMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E MIS+ P++ +S+L+ C
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 194/403 (48%), Gaps = 19/403 (4%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA----HIL 137
+ I Y +AG++N A+S+ +S V ++NT+L+ + KL+ A +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
R CY + + +L++ C+ A+ + EM +GC PD +Y++L+ G+C
Sbjct: 231 LQRDCY-----PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ RL+EA L M G +++ + +L ++C G+ DA ++L +LRKG
Sbjct: 286 KEGRLDEAIKFLNDM----PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ + C G + A ++ + G P+ SY+ + E ++ +
Sbjct: 342 PSVVTFNILINFLCRKGL-LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
L+ M ++G +P +V Y L AL KDG V++A+E++ + KG P + YN ++ GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-SPVLITYNTVIDGL 459
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
AG + A+ L +M + + TY LV GL R+G+ EA + E P
Sbjct: 460 AKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
T+N ++ GLC + A+ +L MI++ P+ + ++ L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 190/402 (47%), Gaps = 13/402 (3%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
T IR + R G+ +A + + L V ++N ++ K ++ A + R
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR--- 197
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
V + + N ++ LC + A+ V M + CYPD +Y IL++ C D +
Sbjct: 198 -MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A LL M +G D+V Y L+ +C +G++ +A++ L + G + P
Sbjct: 257 HAMKLLDEM----RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVIT 311
Query: 264 HRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
H I L C+ G ++ A+ L+ + L +G PS+ +++ + L +G + +L++M
Sbjct: 312 HNIILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
G P+ + Y L K+ +D A+E +E + +G + P + YN +L LC G
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY-PDIVTYNTMLTALCKDGK 429
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
AV L ++S + GC TY ++DGL + G+ +A ++L+EM + P TY+
Sbjct: 430 VEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
L+ GL GK EA+ + E P+ ++S++ +C
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 48/401 (11%)
Query: 119 NTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMD 178
N L++MV+ +LE Y V I L+ C+ ++ A + + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG-FCRLGKTRKAAKILEILE 164
Query: 179 FQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQ 238
G PD +Y++++ G C +N A +L M D+V Y T+L +LCD
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-------SVSPDVVTYNTILRSLCDS 217
Query: 239 GKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINEALIRGGIPSLA 297
GK++ AM++L+++L++ P + I + C D + A L++E RG P +
Sbjct: 218 GKLKQAMEVLDRMLQRDC-YPDVITYTILIEATCRD-SGVGHAMKLLDEMRDRGCTPDVV 275
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRT--------------------------------- 324
+Y+ + + EGR+ E K L++M +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 325 --KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
KGF PS+V + + L + G++ A++++E+ M + P YN LL G C
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK-MPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
A+ YL++M + GC + TY ++ LC+DG+ +A +L ++ + P + TYN
Sbjct: 395 MDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
+I GL GK +A+ L+EM ++ PD +SSLV +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 49/386 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y +I + + +++D+M+ C + + + G+L+EA+ ++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 107 SQFNCVNWTQSFNTLLKEMVKESK-LEAAHIL--FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
C + N +L+ M + ++A +L LR + V + N+L++ LC+
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV----VTFNILINFLCR 356
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
A+ + ++M GC P+ SY+ L+ G C +++++ A L M R G
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR----GCYP 412
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DIV Y T+L ALC GK++DA++ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVE------------------------------------I 436
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+N+ +G P L +Y+ + L G+ + K+LDEMR K P + Y + + L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
+G VDEA++ E G P +N ++ GLC + + A+ +L M + GC N
Sbjct: 497 EGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNE 554
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEM 429
+Y IL++GL +G EA +L E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 12/284 (4%)
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L E L +M + G+ DI+ TL+ C GK + A +ILE IL P
Sbjct: 118 LEEGFKFLENMVYH----GNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPDV 172
Query: 262 RRHRIDLCP-CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLD 320
+ + + C GE I A S+++ + P + +Y+ + L + G++ + +VLD
Sbjct: 173 ITYNVMISGYCKAGE-INNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 321 EMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDA 380
M + +P ++ Y + A +D V A+++++E +G P V YN+L+ G+C
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC-TPDVVTYNVLVNGICKE 287
Query: 381 GNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVET 440
G A+ +L M GC N T+ I++ +C GR+++A ++L +ML + + P V T
Sbjct: 288 GRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 441 YNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+N+LI LC G A+ LE+M P+ ++ L+ C
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
GE EG K L N + G +P + + + G+ + K+L+ + G P ++
Sbjct: 116 GELEEGFKFLEN-MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
Y ++ K G ++ AL V++ V P V YN +L+ LCD+G A+ L +M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
Q C + TY IL++ CRD A ++L+EM R P V TYNVL+ G+C G+
Sbjct: 231 -LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
EA+ +L +M S P++ + ++ S+C
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
+ R G E + LE M+ P + LIRG C +GK +A LE + +PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 473 ISVWSSLVASVCCNTADLNVCRKTLEQLS 501
+ ++ +++ C ++N L+++S
Sbjct: 172 VITYNVMISGY-CKAGEINNALSVLDRMS 199
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 208/439 (47%), Gaps = 12/439 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL+ A+++ +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC-YGWEVKSRIQSLNLLMDVLCQCRR 166
+ + N+LL +++ A L + G++ S + N L+ L + R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF--TFNTLIHGLFRHNR 201
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DI 225
+ A+ + M +GC PD +Y I++ GLC ++ A LL M ++G E +
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-----EQGKIEPGV 256
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
VIY T++ ALC+ + DA+ + ++ KG++ + + C CN G A L++
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR-WSDASRLLS 315
Query: 286 EALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
+ + R P++ ++SA+ EG++VE +K+ DEM + P + Y + +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGET 405
+DEA + E + K F P V YN L+KG C A + ++MS Q G V N T
Sbjct: 376 RLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVT 433
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y L+ G + A V ++M+ P + TY++L+ GLC+ GK A++ E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 466 SQAKLPDISVWSSLVASVC 484
PDI ++ ++ +C
Sbjct: 494 RSKMEPDIYTYNIMIEGMC 512
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 205/431 (47%), Gaps = 8/431 (1%)
Query: 50 SMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQF 109
S++ NRI++ ++ QM + F T I R + +EAV+L +
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
C ++ ++ + K ++ A + L+ +++ + N ++D LC + +
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLA-LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
AL++F EMD +G P+ +Y+ L++ LCN R ++A+ LL M ++ ++V +
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI----ERKINPNVVTFS 330
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMIS 389
Query: 290 RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDE 349
+ P++ +Y+ + R+ EG ++ EM +G + V Y + F+ D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 350 ALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGIL 409
A +++ ++MV +P + Y+ILL GLC+ G A++ + + + + TY I+
Sbjct: 450 A-QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIM 507
Query: 410 VDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAK 469
++G+C+ G+ + + + ++ P V TY ++ G C G + EA EM +
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 470 LPDISVWSSLV 480
LPD +++L+
Sbjct: 568 LPDSGTYNTLI 578
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 192/407 (47%), Gaps = 14/407 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ + A+ + + +SL + + + +++ L+ + S+L A + +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +LN L++ C R A+ + +M G PD +++ L+ GL R
Sbjct: 144 KLGYE--PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ KG D+V Y ++ LC +G I A+ +L+K+ + ++
Sbjct: 202 ASEAVALV----DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ I CN +++ A +L E +G P++ +Y+++ L N GR + ++L +
Sbjct: 258 IYNTIIDALCN-YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC--D 379
M + P++V + A + A K+G + EA E + +EM+K + P + Y+ L+ G C D
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
+ A M+ +SK C N TY L+ G C+ R E + EM R
Sbjct: 376 RLDEA-KHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G + A + ++M+S LPDI +S L+ +C N
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 12/348 (3%)
Query: 137 LFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGL 196
++R G R S+N L D+ + D A+++F +M +P + L+ +
Sbjct: 37 FWVRDFSGVRYDYRKISINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAI 91
Query: 197 CNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGL 256
+ + L+ S+ ++ G ++ Y L+ C + ++ A+ +L K+++ G
Sbjct: 92 AKMNKFD----LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY 147
Query: 257 KAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGD 316
+ + + C+ G I A SL+ + + G P +++ + L+ R E
Sbjct: 148 EPDIVTLNSLLNGFCH-GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
++D M KG P LV Y + L K G +D AL ++++ M +G P V +YN ++
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK-MEQGKIEPGVVIYNTIIDA 265
Query: 377 LCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWP 436
LC+ N A+ +M + G N TY L+ LC GR+ +ASR+L +M+ R P
Sbjct: 266 LCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 437 CVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
V T++ LI GK EA +EMI ++ PDI +SSL+ C
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 176/386 (45%), Gaps = 23/386 (5%)
Query: 110 NCVNWTQSFNTLLKEMVKES-------KLEAAHILFLRSCYGWEVKSR----IQSLNLLM 158
+C W + F+ + + K S KL+ A LF G VKSR I + L+
Sbjct: 34 HCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLF-----GDMVKSRPFPSIVEFSKLL 88
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ + + DL + + ++M G + +Y IL+ C +L+ A +L M +
Sbjct: 89 SAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM----K 144
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
G DIV +LL C +I DA+ ++ +++ G + P S +
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ-PDSFTFNTLIHGLFRHNRAS 203
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A +L++ +++G P L +Y + L G I +L +M P +V+Y +
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
AL V++AL + E KG P V YN L++ LC+ G + A L M ++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-K 321
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
N T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C + EA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 459 MWLEEMISQAKLPDISVWSSLVASVC 484
E MIS+ P++ +++L+ C
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFC 407
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 41/313 (13%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N ++++I + ++ E +++ D+M S + +++ I + +L+EA +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + +C ++NTL+K K +++ LF V + + L+ Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-Q 443
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
R D A VF++M G PD +Y IL+ GLCN+ ++ A +F + +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA----LVVFEYLQRSKMEP 499
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
DI Y ++ +C GK++D + + KG+K
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK-------------------------- 533
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
P++ +Y+ M +G E D + EM+ +G P Y + A +
Sbjct: 534 ----------PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 344 DGMVDEALEVIEE 356
DG + E+I E
Sbjct: 584 DGDKAASAELIRE 596
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 195/428 (45%), Gaps = 49/428 (11%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV LF+++ Q + FN L + K + E L L C E K I +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE----LVLALCKQMESKGIAHSIYT 125
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ A ++ G PD ++ L+ GLC + R++EA L+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV---- 181
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G ++ TL+ LC GK+ DA+ ++++++ G
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R ++D C DG ++ A +L NE I+G + +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS-LDNAFNLFNEMEIKGFKADIIT 300
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + N GR +G K+L +M + P++V + + + K+G + EA ++++E M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 359 VKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGR 418
+G P YN L+ G C A+ + M + GC + T+ IL++G C+ R
Sbjct: 361 QRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANR 418
Query: 419 FLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSS 478
+ + EM +R TYN L++G C GK A +EM+S+ PDI +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 479 LVASVCCN 486
L+ +C N
Sbjct: 479 LLDGLCDN 486
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 190/404 (47%), Gaps = 45/404 (11%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F T + +++EA+ L + + + NTL+ + K+ A +L R
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
+ + + +++V+C+ ++ LA+ + ++M+ + D Y I++ GLC D
Sbjct: 220 VETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L+ A +++F + KG DI+ Y TL+ C+ G+ D ++L ++++ +
Sbjct: 279 LDNA----FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS---- 330
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
P++ ++S + EG++ E D++L E
Sbjct: 331 --------------------------------PNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P+ + Y + + K+ ++EA+++++ + KG P + +NIL+ G C A
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC-DPDIMTFNILINGYCKAN 417
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ ++MS + G +AN TY LV G C+ G+ A ++ +EM+ R P + +Y
Sbjct: 418 RIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLP-DISVWSSLVASVC 484
+L+ GLC G + E + + I ++K+ DI ++ ++ +C
Sbjct: 477 KILLDGLCDNG-ELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 202/443 (45%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + ++ +++ L R++E E++D+M + T + G++++AV
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + + ++ +L M K + A L LR +K ++++D
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL-LRKMEERNIKLDAVKYSIIIDG 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A ++F EM+ +G D +Y+ L+ G CN R ++ LL M R
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR----K 328
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V + L+ + +GK+++A Q+L++++++G+ AP + + ID C N +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFCKENR---L 384
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
E A +++ + +G P + +++ + RI +G ++ EM +G + V Y
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A ++ +E MV P + Y ILL GLCD G A+ K+ K
Sbjct: 445 VQGFCQSGKLEVAKKLFQE-MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + ++ YN++I LC +A
Sbjct: 504 MELDIG-IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+ +M + PD ++ L+
Sbjct: 563 DILFRKMTEEGHAPDELTYNILI 585
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 181/410 (44%), Gaps = 8/410 (1%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
++ N Y ++ ++ +S + E++ +M+ + + ++ I + G L+ A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+LF + ++NTL+ + + L LR ++ + + ++L+D
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL-LRDMIKRKISPNVVTFSVLIDS 342
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + A + +EM +G P+ +Y+ L+ G C + RL EA ++ M KG
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI----SKG 398
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
DI+ + L+ C +I D +++ ++ +G+ A + + C G+ +E A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK-LEVA 457
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L E + R P + SY + L + G + + ++ ++ + +Y +
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ VD+A ++ +KG + R YNI++ LC + + A + +KM+++ G
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDA-RAYNIMISELCRKDSLSKADILFRKMTEE-GHA 575
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+ TY IL+ D A+ ++EEM + V T ++I L S
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L K+ A ++ KE ++ N Y S+I + NR+ E
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C+ F I Y +A ++++ + LF+ +S + T ++NTL++
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KLE A LF + V+ I S +L+D LC + AL +F +++ D
Sbjct: 449 CQSGKLEVAKKLF-QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y I++ G+CN ++++A + +F + KG D Y ++ LC + + A
Sbjct: 508 IGIYMIIIHGMCNASKVDDA----WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ +G AP + I L + G+D + + E + G P+ S M I+
Sbjct: 564 ILFRKMTEEG-HAPDELTYNI-LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 306 LYNEGRI 312
+ + G +
Sbjct: 622 MLSSGEL 628
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 213/443 (48%), Gaps = 10/443 (2%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y+ +I +++ V+ +M E ++ + Y + +++EAV+L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ T +FNTL+ + +K A L R + + + ++++ LC
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLC 232
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ +DLA ++ +M+ P Y+ ++ GLC + +++A +L F + KG
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL----FKEMETKGIR 288
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++V Y +L+ LC+ G+ DA ++L ++ + + + +G+ +E A+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE-AEK 347
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L +E + R PS+ +YS++ R+ E ++ + M +K +P +V Y +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K V+E +EV E +G TV YNIL++GL AG+ +A K+M G N
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPN 465
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEAVMWL 461
TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 466 IMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 462 EEMISQAKLPDISVWSSLVASVC 484
+ + PD+ ++++++ C
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFC 547
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 201/437 (45%), Gaps = 8/437 (1%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL A+++ +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + ++LL ++ A + + + + + N L+ L ++
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEA-VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A+ + M +GC PD +Y +++ GLC T L +++ ++ Q ++I
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCK----RGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y T++ LC + DA+ + +++ KG++ + C CN G A L+++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDM 317
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ R P + ++SA+ EG++VE +K+ DEM + PS+V Y + + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA ++ E + K F P V YN L+KG C + ++MS Q G V N TY
Sbjct: 378 DEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYN 435
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL+ GL + G A + +EM+ P + TYN L+ GLC GK +A++ E +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 468 AKLPDISVWSSLVASVC 484
P I ++ ++ +C
Sbjct: 496 KMEPTIYTYNIMIEGMC 512
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 205/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N +S++ S RI+E ++DQM + F T I + +EA+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+L + C ++ ++ + K + A L + G +++ + N ++D
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDG 265
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ + D AL++F+EM+ +G P+ +Y L+ LCN R ++A+ LL M ++
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI----ERK 321
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+ + L+ A +GK+ +A ++ ++++++ + + C + ++ A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH-DRLDEA 380
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K + + + P + +Y+ + R+ EG +V EM +G + V Y +
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQV 397
LF+ G D A E+ +E MV P + YN LL GLC G + V YL++ SK
Sbjct: 441 LFQAGDCDMAQEIFKE-MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKME 498
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ TY I+++G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 499 PTIY---TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
+EM LP+ +++L+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLI 578
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRS 141
F+ + A+ + + +SL + + + +++ L+ + S+L A +L
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G P+ +++ L+ GL +
Sbjct: 144 KLGYE--PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ KG D+V Y ++ LC +G A +L K+ + L+
Sbjct: 202 ASEAMALI----DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I LC +D A +L E +G P++ +YS++ L N GR + ++L
Sbjct: 258 IYNTIIDGLCKYKHMDD---ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC- 378
+M + P + + A + A K+G + EA E + +EMVK + P++ Y+ L+ G C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D + A M+ +SK C + TY L+ G C+ R E V EM R
Sbjct: 374 HDRLDEA-KQMFEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TYN+LI+GL G A +EM+S P+I +++L+ +C N
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 170/392 (43%), Gaps = 47/392 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++AV+LF + + F+ LL + K +K + I + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTY 119
Query: 155 NLLMDVLCQCRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
++L++ C CRRS L AL V +M G P+ + L+ G C+ +R++EA L+ M
Sbjct: 120 SILIN--CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
F G + V + TL+ L K +AM
Sbjct: 178 FV----TGYQPNTVTFNTLIHGLFLHNKASEAM--------------------------- 206
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
+LI+ + +G P L +Y + L G +L++M P ++
Sbjct: 207 ---------ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
+Y + L K +D+AL + +E KG P V Y+ L+ LC+ G + A L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 393 MSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIG 452
M ++ + T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C
Sbjct: 317 MIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 453 KQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA E M+S+ PD+ +++L+ C
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 9/403 (2%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ + I Y + L+ A +F + C ++ L+ + +++ A LF++
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
E +++ +L+ LC R AL++ +EM+ G P+ +Y +L+ LC+ +
Sbjct: 315 -KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+A LL M +KG +++ Y L+ C +G I+DA+ ++E + + L +P +
Sbjct: 374 FEKARELLGQML----EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL-SPNT 428
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
R + +L ++ A ++N+ L R +P + +Y+++ G ++L
Sbjct: 429 RTYN-ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G P Y + + +L K V+EA ++ + KG P V +Y L+ G C AG
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV-NPNVVMYTALIDGYCKAG 546
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A + L+KM + C+ N T+ L+ GLC DG+ EA+ + E+M+ P V T
Sbjct: 547 KVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+LI L G A ++M+S PD +++ + + C
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 228/503 (45%), Gaps = 35/503 (6%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESN--------R 60
++P+++S + P TAL F + P Y+H+ YAS++ +L + R
Sbjct: 88 ISPSHVSSLFSLDLDPKTALN-FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 61 ITEMKE---------VID----QMKGDSCECKDSV----FATAIRTYARAGQLNEAVSLF 103
+ +K V+D K + E K + + T + + AR G ++E ++
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ + ++N ++ K +E A+ + +L+M CQ
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY-CQ 265
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
+ D A VF EM +GC + +Y L+ GLC RR++EA L F ++
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL----FVKMKDDECFP 321
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+ Y L+ +LC + +A+ +++++ G+K P + + + E A+ L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ + L +G +P++ +Y+A+ G I + V++ M ++ P+ Y + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
V +A+ V+ + M++ +P V YN L+ G C +GN A L M+ + G V +
Sbjct: 441 SN-VHKAMGVLNK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQ 497
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
TY ++D LC+ R EA + + + + P V Y LI G C GK EA + LE+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 464 MISQAKLPDISVWSSLVASVCCN 486
M+S+ LP+ +++L+ +C +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCAD 580
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 197/437 (45%), Gaps = 17/437 (3%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y +++ L+ + EMK+V +M D + + Y + G + EA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ ++ +L+ + L++A +F L+ C EV + L+ LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV-----AYTHLIHGLCV 300
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
RR D A+ +F +M C+P +Y +L+K LC R +EA +L+ M + G
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGIKP 356
Query: 224 DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSL 283
+I Y L+ +LC Q K + A ++L ++L KGL + + C G IE A +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM-IEDAVDV 415
Query: 284 INEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFK 343
+ R P+ +Y+ + I Y + + + VL++M + P +V Y + + +
Sbjct: 416 VELMESRKLSPNTRTYNEL-IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 344 DGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANG 403
G D A ++ +G VP Y ++ LC + A + +Q G N
Sbjct: 475 SGNFDSAYRLLSLMNDRG-LVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNV 532
Query: 404 ETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEE 463
Y L+DG C+ G+ EA +LE+ML ++ P T+N LI GLC+ GK EA + E+
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 464 MISQAKLPDISVWSSLV 480
M+ P +S + L+
Sbjct: 593 MVKIGLQPTVSTDTILI 609
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 225/528 (42%), Gaps = 42/528 (7%)
Query: 5 WPRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEM 64
+P + T T L + + + AL + KE +E + N Y +I L + +
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 65 KEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKE 124
+E++ QM + I Y + G + +AV + + + T+++N L+K
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 125 MVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYP 184
K + +A +L +V + + N L+D C+ D A + M+ +G P
Sbjct: 438 YCKSNVHKAMGVL--NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 185 DRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDA 244
D+ +Y ++ LC +R+ EA L F + QKG ++V+Y L+ C GK+ +A
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDL----FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 245 MQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGI-PSLASYSAMA 303
+LEK+L K + + C DG+ E +L+ E +++ G+ P++++ + +
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA--TLLEEKMVKIGLQPTVSTDTILI 609
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
L +G +M + G P Y + ++G + +A E + +M +
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA-EDMMAKMRENGV 668
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL---------- 413
P + Y+ L+KG D G + A LK+M + GC + T+ L+ L
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 414 -----CRDGRFLEASRV---LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
C +E V LE+M+ S P ++Y LI G+C +G A + M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 466 SQAKL-PDISVWSSLVASVCCNTADLN---------VCRKTLEQLSSC 503
+ P V+++L+ S CC N +C L QL SC
Sbjct: 788 RNEGISPSELVFNALL-SCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 5/274 (1%)
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TLL +L G + + Q+ ++L + +++ C G ++E A +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG-NVEEANQYVSKI 244
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ G P +Y+++ + + KV +EM KG + V Y + L +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
DEA+++ + M PTVR Y +L+K LC + + A+ +K+M ++ G N TY
Sbjct: 305 DEAMDLFVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYT 362
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
+L+D LC +F +A +L +ML + P V TYN LI G C G +AV +E M S+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 468 AKLPDISVWSSLVASVCCNTAD--LNVCRKTLEQ 499
P+ ++ L+ C + + V K LE+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 172/418 (41%), Gaps = 58/418 (13%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y SMI L +S R+ E ++ D ++ ++ I Y +AG+++EA + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
NC+ + +FN L+ + + KL+ A L ++ + + +L+ L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A FQ+M G PD +Y ++ C + RL +A M ++ + G D+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE----DMMAKMRENGVSPDLF 673
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG-----------------LKAPKSRRHRIDLC 269
Y +L+ D G+ A +L+++ G +K K + +LC
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFW 328
++ + + L+ + + P+ SY + + + G + +KV D M R +G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG------- 381
PS +++ A L+ K +EA +V+++ + G +P + +L+ GL G
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVG-HLPQLESCKVLICGLYKKGEKERGTS 852
Query: 382 --------------------------NSAVAVMY-LKKMSKQVGCVANGETYGILVDG 412
V Y L + ++ GC + +TY +L++G
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 194/437 (44%), Gaps = 17/437 (3%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
++ +L +S + + V + M F T + + +AG L ++ + + N
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 111 CVNWTQSFNTLLKEMVKESKLEAA---HILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ K K+E A H RS G+ V S N L++ C+
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS--GFAVTP--YSFNPLIEGYCKQGLF 324
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A V EM G YP +Y+I + LC+ R+++A LL SM + D+V
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--------AAPDVVS 376
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ GK +A + + LR G P + + + ++EGA+ L E
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDD-LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
+ P + +Y+ + G + +V DEM KG P Y + + G
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
D+A + EE + P + +YN+ + GLC GN A+ + +K+ + VG V + TY
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR-VGLVPDHVTYT 554
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
++ G +G+F A + +EML + +P V TY VLI G G+ +A + EM +
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 468 AKLPDISVWSSLVASVC 484
P++ ++L+ +C
Sbjct: 615 GVRPNVMTHNALLYGMC 631
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
EK++RKG P R I L D + A ++ + G +P++ +++ M +
Sbjct: 191 FEKMIRKGF-LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV-------------- 353
G + DK+ EM+ + S V Y + K+G ++EA
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 354 --------------------IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ +EM+ PT YNI + LCD G A L M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ + +Y L+ G + G+F+EAS + +++ P + TYN LI GLC G
Sbjct: 370 A-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A EEM +Q PD+ +++LV N
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 189/410 (46%), Gaps = 20/410 (4%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
S + +R R +L++++ LF ++ Q + F+ LL + K K +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV------ 100
Query: 141 SCYGWE------VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMK 194
Y WE + + + N+L++ C+C + LAL +M G P ++ L+
Sbjct: 101 -IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
G C R+ +A + MF ++ G ++VIY T++ LC ++ +A+ +L ++ +
Sbjct: 160 GFCRGDRVYDALY----MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G+ + + C+ G A +++ R P + +++A+ EGR+ E
Sbjct: 216 GIGPDVVTYNSLISGLCSSGR-WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
++ +EM + P +V Y + L +DEA E+ + KG F P V Y+IL+
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILI 333
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
G C + + +MS Q G V N TY IL+ G CR G+ A + M+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
P + TYNVL+ GLC GK +A++ L +M DI ++ ++ +C
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 8/398 (2%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F+ + ++ + + + L++ + + + N LL + S+L A + FL
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA-LSFLGKM 142
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ I + L++ C+ R AL++F +M G P+ Y+ ++ GLC +++
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL R+ + G G D+V Y +L+ LC G+ DA +++ + ++ + P
Sbjct: 203 DNALDLLN----RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI-YPDVF 257
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ C + A+ E + R P + +YS + L R+ E +++ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+KG +P +V Y + K V+ +++ E +G TV Y IL++G C AG
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV-TYTILIQGYCRAGK 376
Query: 383 SAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYN 442
VA ++M G N TY +L+ GLC +G+ +A +L +M + TYN
Sbjct: 377 LNVAEEIFRRMV-FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 443 VLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
++IRG+C G+ +A + Q +PDI +++++
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 176/386 (45%), Gaps = 8/386 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+ + R QL+ A+S + + +F +LL + ++ A +F G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF-DQMVGMG 181
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
K + N ++D LC+ ++ D AL + M+ G PD +Y+ L+ GLC+ R ++AT
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
++ M +++ D+ + L+ A +G++ +A + E+++R+ L P + +
Sbjct: 242 RMVSCM----TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD-PDIVTYSL 296
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
+ ++ A+ + + +G P + +YS + ++ G K+ EM +G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
+ V Y + + G ++ A E+ + G P + YN+LL GLCD G A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH-PNIITYNVLLHGLCDNGKIEKA 415
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
++ L M K G A+ TY I++ G+C+ G +A + + + P + TY ++
Sbjct: 416 LVILADMQKN-GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 447 GLCSIGKQYEAVMWLEEMISQAKLPD 472
GL G + EA +M LP+
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPN 500
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 33/321 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ N +Y ++I L +S ++ +++++M+ D + + I +G+ ++A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ +++ +FN L+ VKE ++ A F + I + +LL+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE-EFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM-------- 212
LC R D A +F M +GC+PD +Y IL+ G C +++ L M
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 213 -----------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILE 249
F R+ G +I+ Y LL LCD GKI+ A+ IL
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 250 KILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNE 309
+ + G+ A + I C GE + A + +G +P + +Y+ M + LY +
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGE-VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 310 GRIVEGDKVLDEMRTKGFWPS 330
G E D + +M+ G P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 200/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A L L ++++ + N ++D LC+ R D
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 258
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH-DRLDKAKQMFEFMV 317
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P L +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 378 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 435
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 469 KLPDISVWSSLV 480
LPD +++L+
Sbjct: 496 PLPDSGTYNTLI 507
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 197/442 (44%), Gaps = 43/442 (9%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y +I ++I+ ++ +M E ++ + Y ++++AV+L
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLC 162
+ + T +F TL+ H LFL +
Sbjct: 103 VDQMVEMGYRPDTITFTTLI------------HGLFLHN--------------------- 129
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
++ A+ + M +GC P+ +Y +++ GLC ++ A +LL M
Sbjct: 130 ---KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM----EAAKIE 182
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
D+VI+ T++ +LC + DA+ + +++ KG++ + C C+ G A
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSDASQ 241
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L+++ + + P+L +++A+ EG+ VE +K+ D+M + P + Y + +
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
+D+A ++ E + K F P + YN L+KG C + ++MS + G V +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGD 359
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
TY L+ GL DG A +V ++M+ P + TY++L+ GLC+ GK +A+ +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 463 EMISQAKLPDISVWSSLVASVC 484
M DI ++++++ +C
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMC 441
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 187/407 (45%), Gaps = 14/407 (3%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + + ++N L+ + S++ A L +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 73 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ Q+G ++V Y ++ LC +G I A +L K+ ++A
Sbjct: 131 ASEAVALV----DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ I LC +D A +L E +G P++ +YS++ L + GR + ++L
Sbjct: 187 IFNTIIDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M K P+LV + A + A K+G EA E + ++M+K + P + YN L+ G C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + M + C + +TY L+ G C+ R + + + EM R
Sbjct: 303 HDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI+GL G A ++M+S PDI +S L+ +C N
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 13/343 (3%)
Query: 147 VKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
VKSR I N L+ + + ++ DL + + ++M G + +Y+IL+ C ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
+ A LL M + G IV +LL C +I DA+ ++++++ G + P +
Sbjct: 62 SLALALLGKMM----KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTI 116
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
+ A +L++ + RG P+L +Y + L G I +L++M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 323 RTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN 382
+V++ + +L K VD+AL + +E KG P V Y+ L+ LC G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGR 235
Query: 383 SAVAVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
+ A L M K++ N T+ L+D ++G+F+EA ++ ++M+ RS P + TY
Sbjct: 236 WSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
N LI G C + +A E M+S+ PD+ +++L+ C
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I +R+ + K++ + M C + T I+ + ++ ++ + LF+ +
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
S V T ++ TL++ + + + A +F + V I + ++L+D LC +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF-KQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ AL VF M D Y +++G+C ++++ + +F +S KG ++V
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG----WDLFCSLSLKGVKPNVV 466
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKG 255
Y T++ LC + +Q+A +L+K+ G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDG 495
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 206/470 (43%), Gaps = 44/470 (9%)
Query: 17 IIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSC 76
++K+++ P L IF +A ++ + HN Y+ ++ L + + ++ QMK ++C
Sbjct: 62 LMKRERDPQGVLDIFNKASQQ-KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC 120
Query: 77 ECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWT-QSFNTLLKEMVKESKLEAAH 135
++S+F +R ++R+ ++ + +F + V + + +T L ++ ++ +
Sbjct: 121 RFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSR 180
Query: 136 ILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG-CYPDRESYHILMK 194
L L + + ++ N+L+ C+ + A V +EM G YP+ +Y LM
Sbjct: 181 KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 195 GLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRK 254
L R EA L M IS++G D V + ++ C G+++ A +IL+ + +
Sbjct: 241 CLFAHSRSKEAVELFEDM---ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 297
Query: 255 GLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVE 314
G CN P++ +YSA+ G+I E
Sbjct: 298 G---------------CN---------------------PNVYNYSALMNGFCKVGKIQE 321
Query: 315 GDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILL 374
+ DE++ G V Y + ++G DEA++++ E T+ YN++L
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL-TYNVIL 380
Query: 375 KGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSY 434
+GL G S A+ L + + G N +Y I+++ LC +G +A + L M R
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSE-GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 435 WPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
WP T+N L+ LC G V L + +P W ++V S+C
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
Query: 271 CNDGEDIEGAKSLINEALIRGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GF 327
C +G DI A L+ E + R GI P+ +YS + L+ R E ++ ++M +K G
Sbjct: 207 CKNG-DINFA-FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGI 264
Query: 328 WPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV 387
P V + + + G V+ A ++++ M K P V Y+ L+ G C G A
Sbjct: 265 SPDPVTFNVMINGFCRAGEVERAKKILDF-MKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRG 447
++ K+ G + Y L++ CR+G EA ++L EM TYNV++RG
Sbjct: 324 QTFDEV-KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382
Query: 448 LCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
L S G+ EA+ L++ S+ + + ++ ++CCN
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 32 KEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSV-FATAIRTY 90
K + YPN Y++++ L +R E E+ + M D V F I +
Sbjct: 223 KRSGISYPN----SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGF 278
Query: 91 ARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSR 150
RAG++ A + + + C +++ L+ K K++ A F +K
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF-DEVKKTGLKLD 337
Query: 151 IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLY 210
LM+ C+ +D A+ + EM C D +Y+++++GL ++ R EA +L
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 211 SMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP 270
W +G + YR +L ALC G+++ A++ L + +G+ + + + +
Sbjct: 398 Q--W--GSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM 322
C G G + LI I G IP S+ A+ + E ++V ++LD +
Sbjct: 454 CESGYTEIGVRVLIGFLRI-GLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK-GFWPSLVMYEAKLAALFKDGMVDEALE 352
PSL + S L + G + K+L + G P+ ++ + K+G ++ A
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFL 217
Query: 353 VIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDG 412
V+EE G P Y+ L+ L S AV + M + G + T+ ++++G
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 413 LCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPD 472
CR G A ++L+ M P V Y+ L+ G C +GK EA +E+ D
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 473 ISVWSSLVASVCCN 486
+++L+ C N
Sbjct: 338 TVGYTTLMNCFCRN 351
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 204/443 (46%), Gaps = 14/443 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +++++ R++E ++D+M +T I G+++EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ ++ +L + K A LF R +K+ + ++++D
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKMEERNIKASVVQYSIVIDS 254
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D AL +F EM+ +G D +Y L+ GLCND + ++ +L M R
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR----N 310
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
D+V + L+ +GK+ +A ++ +++ +G+ AP + + ID C N +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI-APDTITYNSLIDGFCKENC---L 366
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
A + + + +G P + +YS + R+ +G ++ E+ +KG P+ + Y
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E + +G P+V Y ILL GLCD G A+ +KM K
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + + P V TYNV+I GLC G EA
Sbjct: 486 MTLGIG-IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 458 VMWLEEMISQAKLPDISVWSSLV 480
M +M PD ++ L+
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILI 567
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I Y R +L A S+ + T +F+TL+ E ++ A L R E
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV---E 168
Query: 147 VKSR--IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNE 204
+K R + +++ L++ LC R AL + M G PD +Y ++ LC + N
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC--KSGNS 226
Query: 205 ATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRH 264
A L +F ++ ++ +V Y ++ +LC G DA+ + ++ KG+KA
Sbjct: 227 ALAL--DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
+ CNDG+ +GAK ++ E + R IP + ++SA+ EG+++E ++ +EM T
Sbjct: 285 SLIGGLCNDGKWDDGAK-MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
+G P + Y + + K+ + EA ++ + + KG P + Y+IL+ C A
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVD 402
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +++S + G + N TY LV G C+ G+ A + +EM+ R P V TY +L
Sbjct: 403 DGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ GLC G+ +A+ E+M I +++ ++ +C
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 42/440 (9%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRI 151
++N+A+ LF+++ Q + FN L + + + + L L C G E ++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYD----LVLGFCKGMELNGIEHDM 105
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
++ ++++ C+ ++ A V G PD ++ L+ G C + R++EA L+
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 212 MFW-------------------------------RISQKGSGEDIVIYRTLLFALCDQGK 240
M R+ + G D V Y +L LC G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
A+ + K+ + +KA + + C DG + A SL NE ++G + +YS
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS-FDDALSLFNEMEMKGIKADVVTYS 284
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
++ L N+G+ +G K+L EM + P +V + A + K+G + EA E+ E + +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G P YN L+ G C A M + GC + TY IL++ C+ R
Sbjct: 345 G-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVD 402
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ R+ E+ + P TYN L+ G C GK A +EM+S+ P + + L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 481 ASVCCNTADLNVCRKTLEQL 500
+C N +LN + E++
Sbjct: 463 DGLCDN-GELNKALEIFEKM 481
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T + L + K+ L A +++ E + + Y S+I + N + E
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ D M CE ++ I +Y +A ++++ + LF+ +S + T ++NTL+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ KL AA LF + V + + +L+D LC + AL +F++M
Sbjct: 431 CQSGKLNAAKELF-QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y+I++ G+CN ++++A +S+F +S KG D+V Y ++ LC +G + +A
Sbjct: 490 IGIYNIIIHGMCNASKVDDA----WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
+ K+ G P + I + G + + LI E + G + +S M ID
Sbjct: 546 MLFRKMKEDGC-TPDDFTYNILIRAHLGGSGLISSVELIEEMKV-CGFSADSSTIKMVID 603
Query: 306 LYNEGRI 312
+ ++ R+
Sbjct: 604 MLSDRRL 610
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 208/432 (48%), Gaps = 11/432 (2%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ S RI++ ++DQM + F T I + +EAV+L + Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ T++ + K ++ A + L +K+ + N ++D LC+ R +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLA-LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
+A+ +F EM+ +G P+ +Y+ L+ LCN R ++A+ LL +M +K ++V +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML----EKKINPNVVTF 331
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ E+++++ + P + + + + ++ AK + +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ +P++ +Y+ + R+ +G ++ EM +G + V Y + F+ G D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +++ ++MV + Y+ILL GLC G A++ K + K N Y
Sbjct: 451 SA-QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNT 508
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ EA + + I+ P V TYN +I GLCS EA +M
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 566 TLPNSGTYNTLI 577
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 190/430 (44%), Gaps = 53/430 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
++++AV LF ++ + FN LL + K +K E + ++Q+L
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV----------ISLGEQMQTL 112
Query: 155 NLLMDVL-------CQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ D+ C CRRS LAL V +M G PD + L+ G C+ +R+++A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 206 -------------------THLLYSMFW------------RISQKGSGEDIVIYRTLLFA 234
T L++ +F ++ Q+G D+V Y T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 235 LCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIP 294
LC +G I A+ +L K+ +KA + I C +E A L E +G P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK-YRHVEVAVDLFTEMETKGIRP 291
Query: 295 SLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVI 354
++ +Y+++ L N GR + ++L M K P++V + A + A FK+G + EA E +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA-EKL 350
Query: 355 EEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC 414
EEM++ + P YN+L+ G C A K M + C+ N +TY L++G C
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNTLINGFC 409
Query: 415 RDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDIS 474
+ R + + EM R TY +I+G G A M ++M+S DI
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 475 VWSSLVASVC 484
+S L+ +C
Sbjct: 470 TYSILLHGLC 479
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 18/394 (4%)
Query: 99 AVSLFKNLSQFNCVNWTQSFNTL---LKEMVKESKLEAAHILFLRSCYGWEVKSR----I 151
V F NL C W +SF + +E+++ + + +G VKSR I
Sbjct: 26 TVPSFFNLCGSGC--WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSI 83
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
N L+ + + + +L + + ++M G D +Y I + C +L+ A +L
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC 271
M + G DIV +LL C +I DA+ ++++++ G K P + +
Sbjct: 144 MM----KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-PDTFTFTTLIHGL 198
Query: 272 NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSL 331
A +L+++ + RG P L +Y + L G I +L++M ++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V++ + +L K V+ A+++ E KG P V YN L+ LC+ G + A L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 392 KM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
M K++ N T+ L+D ++G+ +EA ++ EEM+ RS P TYN+LI G C
Sbjct: 318 NMLEKKIN--PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ EA + M+S+ LP+I +++L+ C
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 11/285 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N + ++I + ++ E +++ ++M S + + I + +L+EA +F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ 163
K + +C+ Q++NTL+ K ++E LF V + + ++ Q
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF-Q 445
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE 223
D A VF++M D +Y IL+ GLC+ +L+ A + ++ QK E
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL-----VIFKYLQKSEME 500
Query: 224 -DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
+I IY T++ +C GK+ +A + + K P + + ++ A
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADD 556
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGF 327
L + G +P+ +Y+ + + +++ EMR+ GF
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 217/467 (46%), Gaps = 15/467 (3%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y N ++++I L R++E E++D+M + T + +G+ EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
L + ++ C ++ +L M K + A L LR +K ++++D
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL-LRKMEERNIKLDAVKYSIIIDG 272
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
LC+ D A ++F EM+ +G + +Y+IL+ G CN R ++ LL M R
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR----K 328
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR--ID-LCPCNDGEDI 277
++V + L+ + +GK+++A ++ ++++ +G+ AP + + ID C N +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENH---L 384
Query: 278 EGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAK 337
+ A +++ + +G P++ +++ + RI +G ++ +M +G V Y
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 338 LAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQV 397
+ + G ++ A E+ +E MV P + Y ILL GLCD G S A+ +K+ K
Sbjct: 445 IQGFCELGKLNVAKELFQE-MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 398 GCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEA 457
+ G Y I++ G+C + +A + + ++ P V+TYN++I GLC G EA
Sbjct: 504 MELDIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
+ +M PD ++ L+ + D K +E+L C
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAH-LGDGDATKSVKLIEELKRCG 608
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 206/461 (44%), Gaps = 66/461 (14%)
Query: 76 CECKDSVFAT---AIRTYARAG----QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
CE S F+ + R R+G + ++A+ LF+++ + F+ L + K
Sbjct: 42 CERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKT 101
Query: 129 SKLEAAHILFLRSCYGWEVKS---RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + L L C E+K + +L+++++ C+CR+ LA ++ G P+
Sbjct: 102 KQYD----LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++ L+ GLC + R++EA L+ R+ + G D++ TL+ LC GK +AM
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVD----RMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 246 QILEKILRKG---------------------------LKAPKSRRHRIDLCP-------- 270
+++K++ G L+ + R ++D
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 271 CNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
C G ++ A +L NE ++G ++ +Y+ + N GR +G K+L +M + P+
Sbjct: 274 CKHGS-LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC-----DAGNSAV 385
+V + + + K+G + EA E + +EM+ P Y L+ G C D N V
Sbjct: 333 VVTFSVLIDSFVKEGKLREA-EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+M K GC N T+ IL++G C+ R + + +M +R TYN LI
Sbjct: 392 DLMVSK------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
+G C +GK A +EM+S+ P+I + L+ +C N
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 14/288 (4%)
Query: 31 FKEAKEKYPNYRHNG--P---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
+EA+E + H G P Y S+I + N + + +++D M C+ F
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I Y +A ++++ + LF+ +S V T ++NTL++ + KL A LF +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF-QEMVSR 467
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+V I + +L+D LC S+ AL +F++++ D Y+I++ G+CN ++++A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ +F + KG + Y ++ LC +G + +A + K+ G AP +
Sbjct: 528 ----WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HAPDGWTYN 582
Query: 266 IDL-CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRI 312
I + DG+ + K + E L R G AS M ID+ ++GR+
Sbjct: 583 ILIRAHLGDGDATKSVKLI--EELKRCGFSVDASTIKMVIDMLSDGRL 628
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 192/437 (43%), Gaps = 45/437 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y ++I + NRI + V+D+M+ + I + G+L+ A+ + L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
NC ++ L++ + E ++ A + + +K + + N ++ +C+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEA-LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
D A + + ++ +GC PD SY+IL++ L N + E L+ MF S+K ++V
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF---SEK-CDPNVVT 335
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y L+ LC GKI++AM +L+ + KGL
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLT------------------------------ 365
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
P SY + EGR+ + L+ M + G P +V Y LA L K+G
Sbjct: 366 ------PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGETY 406
D+ALE+ + G P YN + L +G+ A+ M L+ MS G + TY
Sbjct: 420 DQALEIFGKLGEVGC-SPNSSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDEITY 476
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++ LCR+G EA +L +M + P V TYN+++ G C + +A+ LE M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 467 QAKLPDISVWSSLVASV 483
P+ + ++ L+ +
Sbjct: 537 NGCRPNETTYTVLIEGI 553
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 12/326 (3%)
Query: 164 CRRSDL--ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
CR + +LH+ + M +G PD L+KG R + +A ++ I +K
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-----EILEKFG 154
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCP-CNDGEDIEGA 280
D+ Y L+ C +I DA ++L+++ K +P + + I + C+ G+ ++ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGK-LDLA 212
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
++N+ L P++ +Y+ + EG + E K++DEM ++G P + Y +
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+ K+GMVD A E++ +KG P V YNILL+ L + G + KM + C
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCD 330
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
N TY IL+ LCRDG+ EA +L+ M + P +Y+ LI C G+ A+ +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 461 LEEMISQAKLPDISVWSSLVASVCCN 486
LE MIS LPDI +++++A++C N
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKN 416
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 7/319 (2%)
Query: 184 PDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQD 243
PD +Y+ L+ G C R+++AT +L R+ K D V Y ++ +LC +GK+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVL----DRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 244 AMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMA 303
A+++L ++L + P + I + ++ A L++E L RG P + +Y+ +
Sbjct: 212 ALKVLNQLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 304 IDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTF 363
+ EG + +++ + KG P ++ Y L AL G +E E + +M
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG-EKLMTKMFSEKC 329
Query: 364 VPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEAS 423
P V Y+IL+ LC G A M L K+ K+ G + +Y L+ CR+GR A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA-MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 424 RVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
LE M+ P + YN ++ LC GK +A+ ++ P+ S ++++ +++
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 484 CCNTADLNVCRKTLEQLSS 502
+ + LE +S+
Sbjct: 449 WSSGDKIRALHMILEMMSN 467
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 199/432 (46%), Gaps = 8/432 (1%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K + A + L ++++ + N ++D LC+ R D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLA-LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F+EM+ +G P+ +Y L+ LC+ R ++A+ LL M +K ++V +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI----EKKINPNLVTF 333
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK +A ++ + ++++ + + + C + ++ AK + +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH-DRLDKAKQMFEFMV 392
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P + +Y+ + R+ +G ++ EM +G V Y + LF DG D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
A +V ++ MV P + Y+ILL GLC+ G A+ M K + Y
Sbjct: 453 NAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 510
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
+++G+C+ G+ + + + ++ P V TYN +I GLCS EA L++M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 469 KLPDISVWSSLV 480
LP+ +++L+
Sbjct: 571 PLPNSGTYNTLI 582
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 198/434 (45%), Gaps = 37/434 (8%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + V+ ++N L+ + S++ A L +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 148 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 202 LNEATHLLYSMFWR---------------ISQKGSGE----------------DIVIYRT 230
+EA L+ M R + ++G + D+VI+ T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
++ +LC + DA+ + +++ KG++ + C C+ G A L+++ + +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSDASQLLSDMIEK 324
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
P+L +++A+ EG+ VE +K+ D+M + P + Y + + +D+A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
++ E + K F P V YN L+KG C + ++MS + G V + TY L+
Sbjct: 385 KQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLI 442
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
GL DG A +V ++M+ P + TY++L+ GLC+ GK +A+ + M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 471 PDISVWSSLVASVC 484
DI ++++++ +C
Sbjct: 503 LDIYIYTTMIEGMC 516
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 175/393 (44%), Gaps = 49/393 (12%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSL 154
+L++A+ LF + + + FN LL + K K + I E+ + +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTY 123
Query: 155 NLLMDVLCQCRRS--DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
N+L++ C CRRS LAL + +M G P + L+ G C+ +R+++A L+ M
Sbjct: 124 NILIN--CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D + + TL+ L K +A+ ++++++++G +
Sbjct: 182 V----EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--------------- 222
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLV 332
P+L +Y + L G +L++M +V
Sbjct: 223 ---------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 333 MYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKK 392
++ + +L K VD+AL + +E KG P V Y+ L+ LC G + A L
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 393 M-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
M K++ N T+ L+D ++G+F+EA ++ ++M+ RS P + TYN L+ G C
Sbjct: 321 MIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ +A E M+S+ PD+ +++L+ C
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 31 FKEAKEKYPNY--RHNGP---VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFAT 85
F EA++ Y + R P Y S++ +R+ + K++ + M C + T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 86 AIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGW 145
I+ + ++ ++ + LF+ +S V T ++ TL++ + + + A +F +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF-KQMVSD 464
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
V I + ++L+D LC + + AL VF M D Y +++G+C ++++
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
+ +F +S KG ++V Y T++ LC + +Q+A +L+K+ G
Sbjct: 525 ----WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 180/403 (44%), Gaps = 11/403 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
+R + Q NEA+ LF ++ + + F LL + K K + I
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV-INLCDHLQIMG 102
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
V + + NLLM+ CQ + LA +M G PD ++ L+ G C R+ EA
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 207 HLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRI 266
SM ++ + G D+V+Y T++ +LC G + A+ + +++ G++ +
Sbjct: 163 ----SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 267 DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKG 326
CN G A SL+ R P + +++A+ EG+ ++ +++ +EM
Sbjct: 219 VNGLCNSGR-WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
P++ Y + + +G VDEA ++ KG F P V Y L+ G C A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDA 336
Query: 387 VMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIR 446
+ +MS Q G N TY L+ G + G+ A V M+ R P + TYNVL+
Sbjct: 337 MKIFYEMS-QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 447 GLCSIGKQYEAVMWLEEMISQ---AKLPDISVWSSLVASVCCN 486
LC GK +A+M E+M + P+I ++ L+ +C N
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 52/424 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+ S+I NR+ E +++QM + ++ T I + + G +N A+SLF +
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
+ + +L+ + + A L LR ++K + + N L+D + +
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSL-LRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A ++ EM P+ +Y L+ G C + ++EA MF+ + KG D+V
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ----MFYLMETKGCFPDVV 318
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y +L+ C K+ DAM+I ++ +KGL ++
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG----------------------NTITYT 356
Query: 287 ALIRG----GIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
LI+G G P++A +V M ++G P++ Y L L
Sbjct: 357 TLIQGFGQVGKPNVAQ------------------EVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 343 KDGMVDEALEVIEEEMVK--GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
+G V +AL + E+ + P + YN+LL GLC G A+M + M K+
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR-EMD 457
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMW 460
TY I++ G+C+ G+ A + + + P V TY +I GL G ++EA +
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 461 LEEM 464
+M
Sbjct: 518 FRKM 521
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S + + + G P + +++++ R+ E ++++M G P +VMY +
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
+L K+G V+ AL + ++ M P V +Y L+ GLC++G A L+ M+K+
Sbjct: 186 SLCKNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KI 243
Query: 400 VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVM 459
+ T+ L+D ++G+FL+A + EM+ S P + TY LI G C G EA
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 460 WLEEMISQAKLPDISVWSSLVASVC-CNTAD 489
M ++ PD+ ++SL+ C C D
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 157/353 (44%), Gaps = 12/353 (3%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
+Y ++I L ++ + + DQM+ ++ + + +G+ +A SL + +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
++ +FN L+ VKE K A L+ + I + L++ C
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELY-NEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
D A +F M+ +GC+PD +Y L+ G C +++++A + Y M SQKG + +
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM----SQKGLTGNTI 353
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLIN 285
Y TL+ GK A ++ ++ +G+ P R + + L C C +G+ ++ A +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV-PPNIRTYNVLLHCLCYNGK-VKKALMIFE 411
Query: 286 EALIR---GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
+ R G P++ +Y+ + L G++ + V ++MR + ++ Y + +
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSK 395
K G V A+ + KG P V Y ++ GL G A + +KM +
Sbjct: 472 KAGKVKNAVNLFCSLPSKGV-KPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S+I + E +++ M+ C + + I + + ++++A+ +F +
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
SQ T ++ TL++ + K A +F V I++ N+L+ LC +
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF-SHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 167 SDLALHVFQEM---DFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM----------- 212
AL +F++M + G P+ +Y++L+ GLC + +L +A + M
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 213 --------------------FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL 252
F + KG ++V Y T++ L +G +A + K+
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 253 RKGL 256
G+
Sbjct: 523 EDGV 526
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 209/442 (47%), Gaps = 17/442 (3%)
Query: 45 GPVYASMIGILS---ESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
GP ++ +L+ NRI+E ++DQM + F T + + + +EAV+
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
L + + C ++ ++ + K + + A L + G ++++ + + ++D L
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSL 250
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
C+ R D AL++F EMD +G PD +Y L+ LCN R ++A+ LL M R
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER----KI 306
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V + +L+ A +GK+ +A ++ ++++++ + + + C + ++ A+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEAQ 365
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ + + +P + +Y+ + ++V+G ++ +M +G + V Y +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVG 398
F+ D A +++ ++MV P + YN LL GLC G + V YL+K +
Sbjct: 426 FQASDCDNA-QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME-- 482
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAV 458
+ TY I+ +G+C+ G+ + + + ++ P V YN +I G C G + EA
Sbjct: 483 --PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 459 MWLEEMISQAKLPDISVWSSLV 480
+M LPD +++L+
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLI 562
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 10/399 (2%)
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE 146
I R QL+ A+++ + + + N+LL +++ A + +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA-VALVDQMVEMG 165
Query: 147 VKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEAT 206
+ + L+ L Q ++ A+ + + M +GC PD +Y ++ GLC + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 207 HLLYSMFWRISQKGSGE-DIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+LL M +KG E D+VIY T++ +LC + DA+ + ++ KG++
Sbjct: 226 NLLNKM-----EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C CN G A L+++ L R P++ +++++ EG+++E +K+ DEM +
Sbjct: 281 LISCLCNYGR-WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
P++V Y + + +DEA ++ MV +P V YN L+ G C A
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTL-MVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
+ + MS++ G V N TY L+ G + A V ++M+ P + TYN L+
Sbjct: 399 GMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
GLC GK +A++ E + PDI ++ + +C
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 11/346 (3%)
Query: 143 YGWEVKSR----IQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCN 198
+G VKSR I + L+ + + ++ DL + ++M+ G + +Y+I++ LC
Sbjct: 53 FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112
Query: 199 DRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKA 258
+L+ A +L M + G G IV +LL C +I +A+ ++++++ G +
Sbjct: 113 RSQLSFALAILGKMM----KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ- 167
Query: 259 PKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKV 318
P + + A +L+ +++G P L +Y A+ L G +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L++M +V+Y + +L K VD+AL + E KG P V Y+ L+ LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLC 286
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G + A L M ++ N T+ L+D ++G+ +EA ++ +EM+ RS P +
Sbjct: 287 NYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TYN LI G C + EA M+S+ LPD+ +++L+ C
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 41/423 (9%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y+ + + +++ L + N+ +E ++++M C+ + I + G+ + A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF-----------------LRSC- 142
+L + + ++T++ + K ++ A LF L SC
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 143 --YG-WEVKSRIQS-------------LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDR 186
YG W SR+ S N L+D + + A +F EM + P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 187 ESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQ 246
+Y+ L+ G C RL+EA + F + K D+V Y TL+ C K+ D M+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQI----FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 247 ILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDL 306
+ + R+GL + + + D + A+ + + + G P++ +Y+ + L
Sbjct: 402 LFRDMSRRGL-VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 307 YNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPT 366
G++ + V + ++ P + Y + K G V++ ++ +KG P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV-KPD 519
Query: 367 VRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVL 426
V YN ++ G C G A KM K+ G + + TY L+ RDG ++ ++
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 427 EEM 429
+EM
Sbjct: 579 KEM 581
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 45/408 (11%)
Query: 10 TPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVID 69
+PT + ++I Q PL A +IF A ++ PN+RH+ + +I L + +V+
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 70 QMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE- 128
+ + +F I+ YA A + +S F + +FN + N +L +V
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 129 SKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRES 188
L+ A LF +S V +S NLLM C +A +F +M + PD +S
Sbjct: 169 GYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y IL++G C ++N A LL M KG D + Y TLL +LC + ++++A ++L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDML----NKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
++ KG CN P L Y+ M +
Sbjct: 284 CRMKLKG---------------CN---------------------PDLVHYNTMILGFCR 307
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
E R ++ KVLD+M + G P+ V Y + L GM DE + +EE + KG F P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFS 366
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
V N L+KG C G A ++ + K G + +T+ +++ +C +
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVEVVMKN-GETLHSDTWEMVIPLICNE 413
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
R L + +G +Q A ++ + G+ P +R + + + +D+ A L + L
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGV-MPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R +P + SY + +G++ ++LD+M KGF P + Y L +L + +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EA +++ +KG P + YN ++ G C + A L M GC N +Y
Sbjct: 278 EAYKLLCRMKLKGC-NPDLVHYNTMILGFCREDRAMDARKVLDDMLSN-GCSPNSVSYRT 335
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ GLC G F E + LEEM+ + + P N L++G CS GK EA +E ++
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 469 KLPDISVWSSLVASVC 484
+ W ++ +C
Sbjct: 396 ETLHSDTWEMVIPLIC 411
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
D VL + R+ G +P L ++ + + E + +M++ F P + N +L
Sbjct: 104 DDVLAKHRSSG-YPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
L L K S+ G + N +Y +L+ C + A ++ +ML R
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
P V++Y +LI+G C G+ A+ L++M+++ +PD +++L+ S+C T
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 34/434 (7%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
VF + G L EA +F+ + + V S N L + K+ A I+ R
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + S N+++ +CQ R A H+ M+ +G PD SY ++ G C
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 202 LNEATHLLYSM-------------------------------FWRISQKGSGEDIVIYRT 230
L++ L+ M F + ++G D V+Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
L+ C +G I+ A + ++ + + I C G+ +E K L +E +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMFCK 415
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P +++ + G + + +V + M G P++V Y + L K+G +D A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
E++ EM K P + YN ++ GLC +GN AV + + + G A+ TY L+
Sbjct: 476 NELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLM 533
Query: 411 DGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKL 470
D C+ G +A +L+EML + P + T+NVL+ G C G + L M+++
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 471 PDISVWSSLVASVC 484
P+ + ++SLV C
Sbjct: 594 PNATTFNSLVKQYC 607
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 151 IQSLNLLMDVLCQ-CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
+ S N+ + L + C ++ A+ VF+E G + SY+I++ +C R+ EA HLL
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
M KG D++ Y T++ C G++ +++E + RKGLK I
Sbjct: 270 LLM----ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 270 PCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWP 329
C + E A+ +E + +G +P Y+ + G I K EM ++ P
Sbjct: 326 LCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 330 SLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMY 389
++ Y A ++ + G + EA ++ E KG P + L+ G C AG+ A
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 390 LKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLC 449
M Q GC N TY L+DGLC++G A+ +L EM P + TYN ++ GLC
Sbjct: 444 HNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 450 SIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
G EAV + E + D +++L+ + C + +++ ++ L+++
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY-CKSGEMDKAQEILKEM 552
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 201/472 (42%), Gaps = 18/472 (3%)
Query: 13 YLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMK 72
YL+++ K TA+ +F+E E + N Y +I + + RI E ++ M+
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 73 GDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLE 132
++T + Y R G+L++ L + + + + + +++ + + KL
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 133 AAHILFLRSCYGWEVKSRIQSLNLLMDVLCQ--CRRSDL--ALHVFQEMDFQGCYPDRES 188
A + ++ I ++ L C+R D+ A F EM + PD +
Sbjct: 334 EAE-----EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 189 YHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQIL 248
Y ++ G C + EA L + MF KG D V + L+ C G ++DA ++
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFC----KGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 249 EKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN 308
+++ G + C +G D++ A L++E G P++ +Y+++ L
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
G I E K++ E G V Y + A K G +D+A E+++E + KG PT+
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIV 562
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
+N+L+ G C G L M + G N T+ LV C A+ + ++
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
M R P +TY L++G C EA +EM + +S +S L+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 186/430 (43%), Gaps = 10/430 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
Y++++ + ++ ++I+ MK + ++ + I R +L EA F +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + T + TL+ K + AA F + ++ + + ++ CQ
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A +F EM +G PD ++ L+ G C + +A + M Q G ++V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI----QAGCSPNVVT 458
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ LC +G + A ++L ++ + GL+ + I C G +IE A L+ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG-NIEEAVKLVGEF 517
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G +Y+ + G + + ++L EM KG P++V + + GM+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM-SKQVGCVANGETY 406
++ +++ + KG P +N L+K C N A K M S+ VG +G+TY
Sbjct: 578 EDGEKLLNWMLAKG-IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG--PDGKTY 634
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
LV G C+ EA + +EM + + V TY+VLI+G K EA ++M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 467 QAKLPDISVW 476
+ D ++
Sbjct: 695 EGLAADKEIF 704
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 14/274 (5%)
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPC----- 271
+ K G D ++ L D G +++A ++ EK+L GL +D C
Sbjct: 167 TYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS------VDSCNVYLTRL 220
Query: 272 -NDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPS 330
D A + E G ++ASY+ + + GRI E +L M KG+ P
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 331 LVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYL 390
++ Y + + G +D+ ++IE KG P +Y ++ LC A A
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 391 KKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCS 450
+M +Q G + + Y L+DG C+ G AS+ EM R P V TY +I G C
Sbjct: 340 SEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 451 IGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
IG EA EM + PD ++ L+ C
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 143/352 (40%), Gaps = 45/352 (12%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + + E ++ +M E F I Y +AG + +A + ++
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
Q C ++ TL+ + KE L++A+ L L + ++ I + N +++ LC+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANEL-LHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
+ A+ + E + G D +Y LM C +++A +L M KG IV
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML----GKGLQPTIV 562
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR-----------RHRI--------D 267
+ L+ C G ++D ++L +L KG+ AP + R+ + D
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-APNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 268 LCPCNDGED----------------IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGR 311
+C G D ++ A L E +G S+++YS + +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 312 IVEGDKVLDEMRTKGFWPSLVMY----EAKLAALFKDGMVDEALEVIEEEMV 359
+E +V D+MR +G ++ + K D +VD E+IE +V
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 206/472 (43%), Gaps = 50/472 (10%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
++ ++ +++ N+ + + +QM+ ++ I + R QL+ A+++ +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
+ + N+LL +++ A + + + + L+ L Q ++
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEA-VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGE-DIV 226
A+ + + M +GC PD +Y ++ GLC + A +LL M +KG E D+V
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-----EKGKIEADVV 251
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
IY T++ LC + DA + K+ KG+K + + C CN G A L+++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR-WSDASRLLSD 310
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEM-RTKGFWPSLVMYEAKLAALFKDG 345
L + P L ++A+ EG++VE +K+ DEM ++K +P +V Y + K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 346 MVDEALEVIEE----------------------------------EMVKGTFVPTVRVYN 371
V+E +EV E +MV P + YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 372 ILLKGLCDAGNSAVAVM---YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
ILL GLC+ GN A++ Y++K ++ V TY +++ LC+ G+ + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIV----TYTTMIEALCKAGKVEDGWDLFCS 486
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ ++ P V TY ++ G C G + EA EM LP+ +++L+
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 168/409 (41%), Gaps = 52/409 (12%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF---L 139
F+ + A+ + + +SL + + + +++ + + S+L A + +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 140 RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCND 199
+ YG I +LN L++ C R A+ + +M G PD ++ L+ GL
Sbjct: 138 KLGYG----PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 200 RRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
+ +EA L+ R+ KG D+V Y ++ LC +G+ A+ +L K+ + ++A
Sbjct: 194 NKASEAVALV----ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 260 KSRRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
+ I LC +D A L N+ +G P + +Y+ + L N GR + +
Sbjct: 250 VVIYNTIIDGLCKYKHMDD---AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
+L +M K P LV + A + A K+G + EA E + +EMVK
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA-EKLYDEMVK----------------- 348
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
SK C + Y L+ G C+ R E V EM R
Sbjct: 349 ----------------SKH--CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G A M ++M+S PDI ++ L+ +C N
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 214/481 (44%), Gaps = 60/481 (12%)
Query: 9 LTPTYLSQIIKK-QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P +++KK +P + ++ ++ K N RH+ Y + L ++ ++
Sbjct: 67 LNPFISFEVVKKLDNNPHIGFRFWEFSRFKL-NIRHSFWTYNLLTRSLCKAGLHDLAGQM 125
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
+ MK D + + + ++A G+L+ A +L L F N+LL +VK
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVK 183
Query: 128 ESKLEAAHILF-----LRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGC 182
++E A LF +SC + ++ N+L+ LC +++ AL + M GC
Sbjct: 184 LDRVEDAMKLFDEHLRFQSC------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 183 YPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS--GEDIVIYRTLLFALCDQGK 240
PD +Y+ L++G C LN+A+ + ++ + GS D+V Y +++ C GK
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEM-----FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 241 IQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+++A +L+ +LR G+ P+ +++
Sbjct: 293 MREASSLLDDMLRLGI------------------------------------YPTNVTFN 316
Query: 301 AMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVK 360
+ G ++ +++ +M + G +P +V + + + + G V + + EE +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 361 GTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFL 420
G F P Y+IL+ LC+ A L +++ + + Y ++DG C+ G+
Sbjct: 377 GMF-PNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVN 434
Query: 421 EASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
EA+ ++EEM + P T+ +LI G C G+ +EAV +M++ PD SSL+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 481 A 481
+
Sbjct: 495 S 495
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 43/377 (11%)
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ ++ + NLL LC+ DLA +F+ M G P+ L+ +L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILR--------- 253
+ AT LL F +G ++ +LL L +++DAM++ ++ LR
Sbjct: 155 HFATALLLQSF---EVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 254 -----KGLKAPKSRRHRIDLCPCNDG----EDIEGAKSLI---------NEA------LI 289
+GL ++L G DI +LI N+A +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 290 RGGI--PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
G + P + +Y++M G++ E +LD+M G +P+ V + + K G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYG 407
A E+ + + G F P V + L+ G C G + ++M+ + G N TY
Sbjct: 329 LTAEEIRGKMISFGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYS 386
Query: 408 ILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQ 467
IL++ LC + R L+A +L ++ + P YN +I G C GK EA + +EEM +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 468 AKLPDISVWSSLVASVC 484
PD ++ L+ C
Sbjct: 447 KCKPDKITFTILIIGHC 463
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 20/300 (6%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMK-GDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
Y ++I +SN + + E+ +K G C + + I Y +AG++ EA SL +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 106 LSQFNCVNWTQSFNTLLK------EMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + +FN L+ EM+ ++ I F C+ + + L+D
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF--GCF-----PDVVTFTSLID 355
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
C+ + +++EM+ +G +P+ +Y IL+ LCN+ RL +A LL +++ K
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL----GQLASK 411
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
+Y ++ C GK+ +A I+E++ +K K K + + C G E
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE- 470
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A S+ ++ + G P + S++ L G E L+++ KG ++V E K A
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLETKTA 529
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 327 FWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVA 386
FW Y +L K G+ D A ++ E G P R+ L+ + G A
Sbjct: 103 FW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGV-SPNNRLLGFLVSSFAEKGKLHFA 157
Query: 387 VMYLKKMSKQVGC--VANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
L + + GC V N L++ L + R +A ++ +E L +T+N+L
Sbjct: 158 TALLLQSFEVEGCCMVVNS-----LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLSSCS 504
IRGLC +GK +A+ L M PDI +++L+ C + +LN + + + S S
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF-CKSNELNKASEMFKDVKSGS 271
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 171/376 (45%), Gaps = 14/376 (3%)
Query: 110 NCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDL 169
+ V++T N KE + H + R + + + N ++ LC+ + D
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRG-----ILPDVVTYNSIIAALCKAQAMDK 249
Query: 170 ALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYR 229
A+ V M G PD +Y+ ++ G C+ + EA L M G D+V Y
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM----RSDGVEPDVVTYS 305
Query: 230 TLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI 289
L+ LC G+ +A +I + + ++GLK + + G +E L + ++
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL--DLMV 363
Query: 290 RGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
R GI P +S + +G++ + V +MR +G P+ V Y A + L K G V+
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
+A+ + E+M+ P VYN L+ GLC A + +M + C+ N +
Sbjct: 424 DAM-LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNS 481
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
++D C++GR +E+ ++ E M+ P V TYN LI G C GK EA+ L M+S
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 469 KLPDISVWSSLVASVC 484
P+ +S+L+ C
Sbjct: 542 LKPNTVTYSTLINGYC 557
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 38/337 (11%)
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
EV + + +L+ C+ R DL + +G D ++ L+KGLC D+R ++A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
++ R+++ G ++ Y LL LCD+ + Q+A+++L +
Sbjct: 142 MDIV---LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM-------------- 184
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+D G G P + SY+ + + EG + EM +
Sbjct: 185 --------ADDRGG-----------GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P +V Y + +AAL K +D+A+EV+ MVK +P YN +L G C +G
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A+ +LKKM + G + TY +L+D LC++GR +EA ++ + M R P + TY L+
Sbjct: 285 AIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVAS 482
+G + G E L+ M+ PD V+S L+ +
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 174/396 (43%), Gaps = 10/396 (2%)
Query: 92 RAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRI 151
RAG+L+ + N+ + +F LLK + + + A + LR +
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 152 QSLNLLMDVLCQCRRSDLA---LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHL 208
S N+L+ LC RS A LH+ + G PD SY ++ G + ++A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA--- 215
Query: 209 LYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL 268
YS + + +G D+V Y +++ ALC + AM++L +++ G+ + I
Sbjct: 216 -YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C+ G+ E A + + G P + +YS + L GR +E K+ D M +G
Sbjct: 275 GYCSSGQPKE-AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
P + Y L G + E + + + MV+ P V++IL+ G A++
Sbjct: 334 PEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
KM +Q G N TYG ++ LC+ GR +A E+M+ P YN LI GL
Sbjct: 393 VFSKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
C+ K A + EM+ + + ++S++ S C
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 178/405 (43%), Gaps = 8/405 (1%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+ + I +A +++A+ + + + + ++N++L + + A I FL+
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA-IGFLKK 291
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V+ + + +LLMD LC+ R A +F M +G P+ +Y L++G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
L E LL M + G D ++ L+ A QGK+ AM + K+ ++GL
Sbjct: 352 LVEMHGLLDLMV----RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ C G +E A + + G P Y+++ L + ++++ E
Sbjct: 408 TYGAVIGILCKSGR-VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M +G + + + + + + K+G V E+ E + E MV+ P V YN L+ G C AG
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A+ L M VG N TY L++G C+ R +A + +EM P + TY
Sbjct: 526 KMDEAMKLLSGMV-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
N++++GL + A + ++S ++ ++ +C N
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 195/431 (45%), Gaps = 18/431 (4%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y S++ S + E + +M+ D E ++ + + G+ EA +F ++
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL----C 162
++ ++ TLL+ + L H L V++ I + + +L
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLL-----DLMVRNGIHPDHYVFSILICAYA 382
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ + D A+ VF +M QG P+ +Y ++ LC R+ +A +LY F ++ +G
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA--MLY--FEQMIDEGLS 438
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
++Y +L+ LC K + A +++ ++L +G+ + I C +G IE K
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK- 497
Query: 283 LINEALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+ E ++R G+ P++ +Y+ + G++ E K+L M + G P+ V Y +
Sbjct: 498 -LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 342 FKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVA 401
K +++AL V+ +EM P + YNI+L+GL +A A ++++ G
Sbjct: 557 CKISRMEDAL-VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES-GTQI 614
Query: 402 NGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWL 461
TY I++ GLC++ +A ++ + + + T+N++I L +G+ EA
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 462 EEMISQAKLPD 472
S +P+
Sbjct: 675 VAFSSNGLVPN 685
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 34/404 (8%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y+ ++ L ++ R E +++ D M + + + + T ++ YA G L E L +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLN-------LLMD 159
+ F+ L+ K+ K++ A ++F K R Q LN ++
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVF--------SKMRQQGLNPNAVTYGAVIG 414
Query: 160 VLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK 219
+LC+ R + A+ F++M +G P Y+ L+ GLC + A L+ M R
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---- 470
Query: 220 GSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEG 279
G + + + +++ + C +G++ ++ ++ E ++R G+K + + C G+ ++
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK-MDE 529
Query: 280 AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLA 339
A L++ + G P+ +YS + R+ + + EM + G P ++ Y L
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 340 ALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGC 399
LF+ A E+ GT + + YNI+L GLC + A+ + + C
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIE-LSTYNIILHGLCKNKLTDDALQMFQNL-----C 643
Query: 400 VAN----GETYGILVDGLCRDGRFLEASRVL----EEMLIRSYW 435
+ + T+ I++D L + GR EA + L+ +YW
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGG----IPSLA 297
+DA + +++LR+G A +R + D A + R G P L
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNR---ALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + GR+ G L + KGF + + L L D +A++++
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGE--TYGILVDGLCR 415
M + +P V YNILLKGLCD S A+ L M+ G + + +Y +++G +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 416 DGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISV 475
+G +A EML R P V TYN +I LC +A+ L M+ +PD
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 476 WSSLVASVC 484
++S++ C
Sbjct: 269 YNSILHGYC 277
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 46/376 (12%)
Query: 20 KQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDS---- 75
KQ A+ +F + +++ N N Y ++IGIL +S R+ + +QM +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 76 -----------CEC--------------------KDSVFATAIRTYARAGQLNEAVSLFK 104
C C F + I ++ + G++ E+ LF+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 105 NLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQC 164
+ + ++NTL+ K++ A L L +K + + L++ C+
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL-LSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 165 RRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGED 224
R + AL +F+EM+ G PD +Y+I+++GL RR A L + RI++ G+ +
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL----YVRITESGTQIE 615
Query: 225 IVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLI 284
+ Y +L LC DA+Q+ + + LK + + G + E AK L
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE-AKDLF 674
Query: 285 NEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
G +P+ +Y MA ++ +G + E D++ M G M + L +
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 345 GMVDEA---LEVIEEE 357
G + A L +I+E+
Sbjct: 735 GEITRAGTYLSMIDEK 750
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 211/479 (44%), Gaps = 45/479 (9%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
PRL+ + L ++ + K L + K+ + K HN + MI +++
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELK--GIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++ E F+T I G+++EA+ L + + + N L+ +
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K+ A +L R + + + ++ V+C+ ++ LA+ + ++M+ + D
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
Y I++ GLC D L+ A +++F + KG DI+IY TL+ C G+ D
Sbjct: 247 AVKYSIIIDGLCKDGSLDNA----FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++L ++++ + P + ++SA+
Sbjct: 303 KLLRDMIKRKIT------------------------------------PDVVAFSALIDC 326
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
EG++ E +++ EM +G P V Y + + K+ +D+A +++ + KG P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG-P 385
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
+R +NIL+ G C A + +KMS + G VA+ TY L+ G C G+ A +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+EM+ R P + +Y +L+ GLC G+ +A+ E++ DI +++ ++ +C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 59/433 (13%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS---RIQS 153
++AV LF+ +++ F+ L + + + + L L C E+K + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD----LVLDLCKQMELKGIAHNLYT 109
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
L+++++ C+CR+ LA ++ G PD ++ L+ GLC + R++EA L+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV---- 165
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG------------------ 255
R+ + G ++ L+ LC GK+ DA+ ++++++ G
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 256 ---------LKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIPSLAS 298
L+ + R+ ++D C DG ++ A +L NE I+G +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS-LDNAFNLFNEMEIKGFKADIII 284
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEM 358
Y+ + GR +G K+L +M + P +V + A + K+G + EA E + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA-EELHKEM 343
Query: 359 VKGTFVPTVRVYNILLKGLC-----DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++ P Y L+ G C D N + +M K GC N T+ IL++G
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK------GCGPNIRTFNILINGY 397
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
C+ + + +M +R TYN LI+G C +GK A +EM+S+ PDI
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 474 SVWSSLVASVCCN 486
+ L+ +C N
Sbjct: 458 VSYKILLDGLCDN 470
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 191/423 (45%), Gaps = 29/423 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P +T + +++ K A+++ ++ +E+ + + Y+ +I L + +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ ++M+ + ++ T IR + AG+ ++ L +++ + +F+ L+
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
VKE KL A L + + + L+D C+ + D A H+ M +GC P+
Sbjct: 328 VKEGKLREAEELH-KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+++IL+ G C +++ L F ++S +G D V Y TL+ C+ GK++ A
Sbjct: 387 IRTFNILINGYCKANLIDDGLEL----FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 246 QILEKILRKGLKAPKSRRHRIDLCP--------CNDGEDIEGAKSLINEALIRGGIP-SL 296
++ ++++ SRR R D+ C++GE + + I E + + + +
Sbjct: 443 ELFQEMV--------SRRVRPDIVSYKILLDGLCDNGEPEKALE--IFEKIEKSKMELDI 492
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + + N ++ + + + KG P + Y + L K G + EA +++
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFR 551
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
+M + P YNIL++ G++ + ++++ K+ G + T ++VD L D
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI-KRCGFSVDASTVKMVVDML-SD 609
Query: 417 GRF 419
GR
Sbjct: 610 GRL 612
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 332 VMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLK 391
V Y +L + D D+A+++ +E M + P + ++ L + + + K
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQE-MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 392 KMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSI 451
+M + G N T I+++ CR + A + +++ Y P T++ LI GLC
Sbjct: 97 QMELK-GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 452 GKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
G+ EA+ ++ M+ P + ++LV +C N
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 18/479 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L+T + L + + + K A + KE +K + N VY ++I E+ + +
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL----SQFNCVNWTQSFNTL 121
E+ D M S + T I+ Y + GQ + A L K + N ++T L
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 122 LKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
++ +S L + LR+ + L L+ LC+ + AL ++ + +G
Sbjct: 459 CSHLMFDSALRFVGEMLLRN-----MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
D + + L+ GLC +L+EA + + R G D V Y TL+ C + K+
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 569
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+A L++++++GLK P + + I +C + +E A ++ G +P + +YS
Sbjct: 570 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKG 361
M R EG + DEM +K P+ V+Y + A + G + ALE+ E+ KG
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 362 TFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLE 421
P Y L+KG+ A + ++M + G N Y L+DG + G+ ++
Sbjct: 689 -ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVK 746
Query: 422 ASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+L EM ++ P TY V+I G G EA L EM + +PD + +
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 82 VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRS 141
+F TAI + + G++ EAV LF SK+E A
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLF-------------------------SKMEEAG------ 303
Query: 142 CYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
V + + N ++D L C R D A ++M +G P +Y IL+KGL +R
Sbjct: 304 -----VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+ +A +L M ++KG ++++Y L+ + + G + A++I + ++ KGL S
Sbjct: 359 IGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414
Query: 262 RRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDE 321
+ + C +G+ + A+ L+ E L G + S++++ L + + + E
Sbjct: 415 TYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 322 MRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAG 381
M + P + ++ L K G +ALE+ + + KG FV R N LL GLC+AG
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAG 532
Query: 382 NSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETY 441
A K++ + GCV + +Y L+ G C + EA L+EM+ R P TY
Sbjct: 533 KLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 442 NVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
++LI GL ++ K EA+ + ++ LPD+ +S ++ C
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 27/356 (7%)
Query: 139 LRSCYGWEVKSRIQSLNLLMDVLCQCRRSD---LALHVFQEMDFQGCYPDRESYHILMKG 195
L C+ E++ ++ +LL++V C + D LAL VF + +G +P + + +IL+
Sbjct: 191 LSLCFDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 248
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
L R NE + + + KG D+ ++ T + A C GK+++A+++ K+ G
Sbjct: 249 LV---RANEFQKCCEA--FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALI-------RGGIPSLASYSAMAIDLYN 308
+ AP ++ N D G +EA + RG P+L +YS + L
Sbjct: 304 V-AP-------NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 309 EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVR 368
RI + VL EM KGF P++++Y + + + G +++A+E I++ MV T
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSS 414
Query: 369 VYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEE 428
YN L+KG C G + A LK+M +G N ++ ++ LC F A R + E
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 429 MLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
ML+R+ P LI GLC GK +A+ + +++ + D ++L+ +C
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 14/456 (3%)
Query: 27 ALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
A+K+F + +E N + ++I L R E ++M E ++
Sbjct: 292 AVKLFSKMEE--AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKL-EAAHILFLRSCYGW 145
++ RA ++ +A + K +++ +N L+ ++ L +A I L G
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 146 EVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEA 205
+ S + N L+ C+ ++D A + +EM G ++ S+ ++ LC+ + A
Sbjct: 410 SLTS--STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 206 THLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHR 265
+ M R G G + TL+ LC GK A+++ + L KG +
Sbjct: 468 LRFVGEMLLRNMSPGGG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 266 IDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
+ C G+ ++ A + E L RG + SY+ + + ++ E LDEM +
Sbjct: 524 LLHGLCEAGK-LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P Y + LF V+EA++ ++ G +P V Y++++ G C A +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG-MLPDVYTYSVMIDGCCKAERTEE 641
Query: 386 AVMYLKKM-SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
+ +M SK V N Y L+ CR GR A + E+M + P TY L
Sbjct: 642 GQEFFDEMMSKNVQ--PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
I+G+ I + EA + EEM + P++ +++L+
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 93 AGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQ 152
AG+L+EA + K + CV S+NTL+ + KL+ A +FL +K
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNY 589
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
+ ++L+ L + + A+ + + G PD +Y +++ G C R E M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ Q + V+Y L+ A C G++ A+++ E + KG+ +P S + + +
Sbjct: 650 MSKNVQPNT----VVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMS 704
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYN------------------------ 308
+E AK L E + G P++ Y+A+ ID Y
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL-IDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Query: 309 ------------EGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
+G + E ++L+EMR KG P + Y+ + K G V EA + +E
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Query: 357 E 357
E
Sbjct: 824 E 824
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
KG P + ++ + A K G V+EA+++ + M + P V +N ++ GL G
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
A M+ +KM ++ G TY ILV GL R R +A VL+EM + + P V YN L
Sbjct: 326 EAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQLS 501
I G +A+ + M+S+ S +++L+ C N N R E LS
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 189/427 (44%), Gaps = 50/427 (11%)
Query: 95 QLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQ 152
L E + LF + Q + F+ +L ++ K + LF + C + +
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC---GIGHDLY 105
Query: 153 SLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM 212
S N++++ LC+C R +AL V +M G PD + L+ G C R+ +A L+ M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 213 FWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCN 272
+ G D+VIY T++ C G + DA+++ +++ R G++A + + C
Sbjct: 166 ----EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 273 DGEDIEGAKSLINEALIRGGIPSLASYSAM------------AIDLYNE----------- 309
G + A+ L+ + ++R +P++ +++A+ A+ LY E
Sbjct: 222 SGRWSDAAR-LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 310 ------------GRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
GR+ E ++LD M TKG P +V Y + K VDE ++ E
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+G T+ YN +++G AG A +M + N TY IL+ GLC +
Sbjct: 341 AQRGLVGDTI-TYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNW 395
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
R +A + E M + TYN++I G+C IG +A + + PD+ ++
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 478 SLVASVC 484
++++ C
Sbjct: 456 TMISGFC 462
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 46/375 (12%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
Y + +S+I + NR+ + +++ +M+ ++ T I + G +N+AV
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
LF + + ++N+L+ + + A L +R ++ + + ++DV
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL-MRDMVMRDIVPNVITFTAVIDV 253
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
+ + A+ +++EM + PD +Y+ L+ GLC R++EA +L M KG
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV----TKG 309
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
D+V Y TL+ C + R+D EG
Sbjct: 310 CLPDVVTYNTLINGFC-------------------------KSKRVD----------EGT 334
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
K L E RG + +Y+ + + GR ++ M ++ P++ Y L
Sbjct: 335 K-LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 390
Query: 341 LFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
L + V++AL V+ E M K + YNI++ G+C GN A + +S + G
Sbjct: 391 LCMNWRVEKAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLK 448
Query: 401 ANGETYGILVDGLCR 415
+ +Y ++ G CR
Sbjct: 449 PDVVSYTTMISGFCR 463
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T + + K+ A+K+++E + + + Y S+I L R+ E K
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEAK 299
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+++D M C + T I + ++ +++E LF+ ++Q V T ++NT+++
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
+ + +AA +F R + + I++ ++L+ LC R + AL +F+ M D
Sbjct: 360 FQAGRPDAAQEIFSR----MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+I++ G+C + +A + +F +S KG D+V Y T++ C + + +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDA----WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 246 QILEKILRKGL 256
+ K+ GL
Sbjct: 472 LLYRKMQEDGL 482
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVM 388
PS+V + L+ + K D + + V G + YNI++ LC +A+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG-IGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 389 YLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGL 448
+ KM K G + T L++G C+ R +A ++ +M + P V YN +I G
Sbjct: 126 VVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 449 CSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
C IG +AV + M D ++SLVA +CC+
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 209/500 (41%), Gaps = 59/500 (11%)
Query: 32 KEAKEKYPNYRHNGPV-----YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATA 86
+EAK+ + + G V Y M+ S+ I E +++ +M + CE V +
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 87 IRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSC 142
I T +A +++EA +F + + ++NTLL + K K++ A LF + C
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 143 YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRL 202
+ N L D LC+ LAL + +M GC PD +Y+ ++ GL + ++
Sbjct: 605 -----PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKIL---------- 252
EA + M +K D V TLL + I+DA +I+ L
Sbjct: 660 KEAMCFFHQM-----KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 253 -----------RKGLKAPKSRRHR-IDLCPCNDGE--------------DIEGAKSLINE 286
G+ S R + C DG+ ++ GA++L +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 287 ALIRGGI-PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDG 345
G+ P L +Y+ + L I V ++++ G P + Y L A K G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 346 MVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAV-MYLKKMSKQVGCVANGE 404
+DE E+ +E T+ +NI++ GL AGN A+ +Y MS +
Sbjct: 835 KIDELFELYKEMSTHECEANTI-THNIVISGLVKAGNVDDALDLYYDLMSDR-DFSPTAC 892
Query: 405 TYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEM 464
TYG L+DGL + GR EA ++ E ML P YN+LI G G+ A + M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 465 ISQAKLPDISVWSSLVASVC 484
+ + PD+ +S LV +C
Sbjct: 953 VKEGVRPDLKTYSVLVDCLC 972
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 195/478 (40%), Gaps = 44/478 (9%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAV 100
+R + Y+S++ L + I + ++ +M+ + F IR RAG++NEA
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 101 SLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDV 160
+ K + C ++ L+ + KL+ A +F + G R+ + LL D
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL-DR 337
Query: 161 LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKG 220
R D + EM+ G PD ++ IL+ LC EA L M +G
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM----RDQG 393
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP--------------------- 259
++ Y TL+ L ++ DA+++ + G+K
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 260 ------KSRRHRIDLCPCN--------DGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
K++ ++ CN G D E AK + G +P +Y+ M
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE-AKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
G I E K+L EM G P +++ + + L+K VDEA ++ M + P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF-MRMKEMKLKP 571
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
TV YN LL GL G A+ + M Q GC N T+ L D LC++ A ++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 426 LEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
L +M+ P V TYN +I GL G+ EA+ + +M + PD +L+ V
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGV 687
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 7/329 (2%)
Query: 46 PVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKN 105
P Y +IG L E++ I ++V Q+K C + + + Y ++G+++E L+K
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 106 LSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCR 165
+S C T + N ++ +VK ++ A L+ + + L+D L +
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 166 RSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDI 225
R A +F+ M GC P+ Y+IL+ G + A ++F R+ ++G D+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC----ALFKRMVKEGVRPDL 961
Query: 226 VIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLIN 285
Y L+ LC G++ + + +++ GL P + + + +E A L N
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLN-PDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 286 EALI-RGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKD 344
E RG P L +Y+++ ++L G + E K+ +E++ G P++ + A +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 345 GMVDEALEVIEEEMVKGTFVPTVRVYNIL 373
G + A V + MV G F P Y L
Sbjct: 1081 GKPEHAYAVY-QTMVTGGFSPNTGTYEQL 1108
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 160/394 (40%), Gaps = 15/394 (3%)
Query: 91 ARAGQLNEAVSLFKNL-SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKS 149
A AG ++ AVS + L + C + +++ K + + A LF + V+
Sbjct: 725 AEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 150 RIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ + NLL+ L + ++A VF ++ GC PD +Y+ L+ +++E L
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE----L 839
Query: 210 YSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLC 269
+ ++ +S + + + ++ L G + DA+ + ++ +P + +
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG---- 895
Query: 270 PCNDGEDIEG----AKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTK 325
P DG G AK L L G P+ A Y+ + G + M +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P L Y + L G VDE L +E G P V YN+++ GL +
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG-LNPDVVCYNLIINGLGKSHRLEE 1014
Query: 386 AVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLI 445
A++ +M G + TY L+ L G EA ++ E+ P V T+N LI
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSL 479
RG GK A + M++ P+ + L
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G + + SY+ + L E +V M +GF PSL Y + + L K +D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILV 410
+ +++E G P V + I ++ L AG A LK+M + GC + TY +L+
Sbjct: 243 MGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLI 300
Query: 411 DGLCRDGRFLEASRVLEEM--------------------------LIRSYW--------- 435
D LC + A V E+M ++ +W
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
P V T+ +L+ LC G EA L+ M Q LP++ +++L+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 298 SYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEE 357
+Y + L +G + + L +MR GF + Y + L K EA+EV
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 358 MVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDG 417
+++G F P+++ Y+ L+ GL +VM L K + +G N T+ I + L R G
Sbjct: 215 ILEG-FRPSLQTYSSLMVGL-GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 418 RFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWS 477
+ EA +L+ M P V TY VLI LC+ K A E+M + PD +
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 478 SLV 480
+L+
Sbjct: 333 TLL 335
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 197/427 (46%), Gaps = 14/427 (3%)
Query: 49 ASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQ 108
+S++ RI++ ++DQM F T I + +EAV+L + Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 109 FNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSD 168
C ++ ++ + K ++ A L L ++++ + + ++D LC+ R D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 169 LALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIY 228
AL++F EM+ +G P+ +Y L+ LCN R ++A+ LL M ++ ++V +
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI----ERKINPNVVTF 333
Query: 229 RTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEAL 288
L+ A +GK+ +A ++ ++++++ + + C + ++ AK + +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELMI 392
Query: 289 IRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
+ P++ +Y+ + RI EG ++ EM +G + V Y + F+ D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGN---SAVAVMYLKKMSKQVGCVANGET 405
A +++ ++MV P + YN LL GLC G + V YL++ SK + T
Sbjct: 453 NA-QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIY---T 507
Query: 406 YGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMI 465
Y I+++G+C+ G+ + + + ++ P V YN +I G C G + EA +M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 466 SQAKLPD 472
LPD
Sbjct: 568 EDGPLPD 574
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 204/447 (45%), Gaps = 18/447 (4%)
Query: 43 HNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSL 102
HN Y +I ++I+ ++ +M E ++ + Y ++++AV+L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 103 FKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF----LRSCYGWEVKSRIQSLNLLM 158
+ + T +F TL+ + +K A L R C + + + +++
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-----QPNLVTYGVVV 232
Query: 159 DVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQ 218
+ LC+ DLA ++ +M+ + Y ++ LC R ++A +L F +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL----FTEMEN 288
Query: 219 KGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIE 278
KG +++ Y +L+ LC+ + DA ++L ++ + + + + +G+ +E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 279 GAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKL 338
A+ L +E + R P + +YS++ R+ E + + M +K +P++V Y +
Sbjct: 349 -AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 339 AALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVG 398
K +DE +E+ E +G TV Y L+ G A + A M K+M G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSD-G 465
Query: 399 CVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW-PCVETYNVLIRGLCSIGKQYEA 457
N TY L+DGLC++G+ LE + V+ E L RS P + TYN++I G+C GK +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 458 VMWLEEMISQAKLPDISVWSSLVASVC 484
+ + PD+ +++++++ C
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 18/409 (4%)
Query: 83 FATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSC 142
F + A+ + + +SL + + + + ++N L+ + S++ A L +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 143 -YGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRR 201
G+E I +L+ L++ C +R A+ + +M G PD ++ L+ GL +
Sbjct: 148 KLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 202 LNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS 261
+EA L+ R+ Q+G ++V Y ++ LC +G I A +L K+ ++A
Sbjct: 206 ASEAVALV----DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 262 RRHRI--DLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ LC +D A +L E +G P++ +YS++ L N R + ++L
Sbjct: 262 IYSTVIDSLCKYRHEDD---ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC- 378
+M + P++V + A + A K+G + EA E + +EM+K + P + Y+ L+ G C
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 379 -DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
D + A M+ +SK C N TY L++G C+ R E + EM R
Sbjct: 378 HDRLDEA-KHMFELMISKD--CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
TY LI G A M ++M+S P+I +++L+ +C N
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 23/382 (6%)
Query: 114 WTQSFNT-------LLKEMVKESKLEAAHILFLRSCYGWEVKSR----IQSLNLLMDVLC 162
W ++F++ +L+ + KL+ A LF G VKSR I N L+ +
Sbjct: 42 WGRAFSSGSGDYREILRNGLHSMKLDDAIGLF-----GGMVKSRPLPSIFEFNKLLSAIA 96
Query: 163 QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSG 222
+ ++ DL + + ++M G + +Y+IL+ C +++ A LL M + G
Sbjct: 97 KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM----KLGYE 152
Query: 223 EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKS 282
IV +LL C +I DA+ ++++++ G + P + + A +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTITFTTLIHGLFLHNKASEAVA 211
Query: 283 LINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALF 342
L++ + RG P+L +Y + L G I +L++M ++V+Y + +L
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 343 KDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVAN 402
K D+AL + E KG P V Y+ L+ LC+ + A L M ++ N
Sbjct: 272 KYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPN 329
Query: 403 GETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLE 462
T+ L+D ++G+ +EA ++ +EM+ RS P + TY+ LI G C + EA E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 463 EMISQAKLPDISVWSSLVASVC 484
MIS+ P++ +++L+ C
Sbjct: 390 LMISKDCFPNVVTYNTLINGFC 411
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 199/450 (44%), Gaps = 50/450 (11%)
Query: 10 TPTYLSQIIKK--QKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
TP ++ ++K+ P AL+ F + Y H+ + I I + + + +
Sbjct: 55 TPNLVNSVLKRLWNHGP-KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 68 IDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVK 127
I +M+ FA YA AG+ ++AV LF N+ + C SFNT+L + K
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 128 ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRE 187
++E A+ LF R+ G + N++++ C +R+ AL V +EM +G P+
Sbjct: 174 SKRVEKAYELF-RALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 188 SYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQI 247
+Y+ ++KG ++ A + F + ++ D+V Y T++ G+I+ A +
Sbjct: 232 TYNTMLKGFFRAGQIRHA----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 248 LEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY 307
++++R+G+ +PS+A+Y+AM L
Sbjct: 288 FDEMIREGV------------------------------------LPSVATYNAMIQVLC 311
Query: 308 NEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTV 367
+ + + +EM +G+ P++ Y + LF G E+++ +G P
Sbjct: 312 KKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC-EPNF 370
Query: 368 RVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLC---RDGRFLEASR 424
+ YN++++ + A+ +KM C+ N +TY IL+ G+ R + A +
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSG-DCLPNLDTYNILISGMFVRKRSEDMVVAGK 429
Query: 425 VLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
+L EM+ R + P T+N ++ GL G Q
Sbjct: 430 LLLEMVERGFIPRKFTFNRVLNGLLLTGNQ 459
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 52/348 (14%)
Query: 145 WEVKSRIQSLNL---------LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKG 195
W + R++SL + + + + D A+ +F M GC+ D S++ ++
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 196 LCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKG 255
LC +R+ +A L ++ R S D V Y +L C + A+++L++++ +G
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSV-----DTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 256 LKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEG 315
+ P+L +Y+ M + G+I
Sbjct: 226 IN------------------------------------PNLTTYNTMLKGFFRAGQIRHA 249
Query: 316 DKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ EM+ + +V Y + G + A V +E M++ +P+V YN +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE-MIREGVLPSVATYNAMIQ 308
Query: 376 GLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYW 435
LC N AV+ ++M ++ G N TY +L+ GL G F +++ M
Sbjct: 309 VLCKKDNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 436 PCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASV 483
P +TYN++IR + +A+ E+M S LP++ ++ L++ +
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 294 PSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEV 353
PS +++ +A + G+ + K+ M G + L + L L K V++A E+
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 354 IEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGL 413
++G F YN++L G C + A+ LK+M ++ G N TY ++ G
Sbjct: 184 FRA--LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-GINPNLTTYNTMLKGF 240
Query: 414 CRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDI 473
R G+ A EM R V TY ++ G G+ A +EMI + LP +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 474 SVWSSLVASVC 484
+ +++++ +C
Sbjct: 301 ATYNAMIQVLC 311
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 28/417 (6%)
Query: 84 ATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCY 143
++ R AG+ +A S+ + + + T +++ +L + SK+E A +LF
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 144 GWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLN 203
G V + + + +++D C+ + A F EM GC P+ +Y L+ ++++
Sbjct: 512 GGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 204 EATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRR 263
A L +M +G +IV Y L+ C G+++ A QI E+
Sbjct: 571 YANELFETML----SEGCLPNIVTYSALIDGHCKAGQVEKACQIFER------------- 613
Query: 264 HRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMR 323
+C D D++ ++ R P++ +Y A+ R+ E K+LD M
Sbjct: 614 ----MCGSKDVPDVDMYFKQYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 324 TKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNS 383
+G P+ ++Y+A + L K G +DEA EV + EM + F T+ Y+ L+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 384 AVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNV 443
+A L KM + C N Y ++DGLC+ G+ EA ++++ M + P V TY
Sbjct: 726 DLASKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 444 LIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLEQL 500
+I G IGK + LE M S+ P+ + L+ CC L+V LE++
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH-CCKNGALDVAHNLLEEM 840
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 227/590 (38%), Gaps = 121/590 (20%)
Query: 9 LTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVI 68
L+ + + ++++ P + F A + Y+H PVY +++ ++ + +E +
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQI-GYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 69 DQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKE 128
Q++ D E +R + R G + A+ L F ++N L++ +K
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 129 SKLEAAHIL-------------FLRSCYGW---------EVKSRIQSLNLLMDV------ 160
+L++A ++ F C+ + E + +++ N + D
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKL 308
Query: 161 ---LCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------- 209
LC+ + A+ M C P+ +Y L+ G N ++L +L
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 210 -----------------------YSMFWRISQKGSGEDIVIYRTLLFALC-DQGKIQ-DA 244
Y + ++ + G V+Y L+ ++C D+ + D
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 245 MQILEK----ILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYS 300
+ + EK +L G+ K C C+ G+ E A S+I E + +G IP ++YS
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYS 487
Query: 301 -------------------------AMAIDLYN----------EGRIVEGDKVLDEMRTK 325
+ D+Y G I + K +EMR
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 326 GFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAV 385
G P++V Y A + A K V A E+ E + +G +P + Y+ L+ G C AG
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEK 606
Query: 386 AVMYLKKM--SKQVGCV-------------ANGETYGILVDGLCRDGRFLEASRVLEEML 430
A ++M SK V V N TYG L+DG C+ R EA ++L+ M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 431 IRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLV 480
+ P Y+ LI GLC +GK EA EM + +SSL+
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 193/466 (41%), Gaps = 28/466 (6%)
Query: 40 NYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEA 99
N+ + Y +I L E++ E + +++M+ SC ++T + QL
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 100 VSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMD 159
+ + C + FN+L+ A+ L + + + N+L+
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV-VYNILIG 415
Query: 160 VLC------QCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
+C C DLA + EM G ++ + + LC+ + +A +S+
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA----FSVI 471
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
+ +G D Y +L LC+ K++ A + E++ R GL A + C
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G IE A+ NE G P++ +Y+A+ ++ +++ + M ++G P++V
Sbjct: 532 GL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 334 YEAKLAALFKDGMVDEALEVIE---------------EEMVKGTFVPTVRVYNILLKGLC 378
Y A + K G V++A ++ E ++ + P V Y LL G C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ A L MS + GC N Y L+DGLC+ G+ EA V EM + +
Sbjct: 651 KSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
TY+ LI + +Q A L +M+ + P++ +++ ++ +C
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 34/462 (7%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y M+ ++ I + ++ ++M+ C + I Y +A +++ A LF+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV---------------KSRI 151
C+ +++ L+ K ++E A +F R C +V + +
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 152 QSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYS 211
+ L+D C+ R + A + M +GC P++ Y L+ GLC +L+EA +
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 212 MFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKS--RRHRID-L 268
M S+ G + Y +L+ + A ++L K+L AP ID L
Sbjct: 700 M----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEMIDGL 754
Query: 269 CPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFW 328
C ++ ++ E +G P++ +Y+AM G+I ++L+ M +KG
Sbjct: 755 CKVGKTDEAYKLMQMMEE---KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 329 PSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRV-YNILLKGLCDAGNSAVAV 387
P+ V Y + K+G +D A ++EE +K T PT Y +++G +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEE--MKQTHWPTHTAGYRKVIEGF---NKEFIES 866
Query: 388 MYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS--YWPCVETYNVLI 445
+ L Q Y +L+D L + R A R+LEE+ S TYN LI
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926
Query: 446 RGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNT 487
LC K A EM + +P++ + SL+ + N+
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 42 RHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVS 101
R N Y +++ +S+R+ E ++++D M + CE V+ I + G+L+EA
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-- 693
Query: 102 LFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVL 161
+E K E + F + Y + + L+D
Sbjct: 694 -------------------------QEVKTEMSEHGFPATLYTY---------SSLIDRY 719
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGS 221
+ +R DLA V +M C P+ Y ++ GLC + +EA Y + + +KG
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA----YKLMQMMEEKGC 775
Query: 222 GEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAK 281
++V Y ++ GKI+ +++LE++ KG+ AP +R+ + C ++ A
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAH 834
Query: 282 SLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAAL 341
+L+ E + + P+ + I+ +N+ +E +LDE+ P L +Y + L
Sbjct: 835 NLLEE-MKQTHWPTHTAGYRKVIEGFNK-EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 342 FKDGMVDEALEVIEE-EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCV 400
K ++ AL ++EE T V YN L++ LC A A +M+K+ G +
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK-GVI 951
Query: 401 ANGETYGILVDGLCRDGRFLEASRVLE 427
+++ L+ GL R+ + EA +L+
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 294 PSLASYSAM-----AIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVD 348
PS ++Y+ + D + ++ + L +R GF Y +L K G
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-----SLCKVGKWR 287
Query: 349 EALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGI 408
EAL ++E E FVP Y L+ GLC+A A+ +L +M + C+ N TY
Sbjct: 288 EALTLVETE----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRM-RATSCLPNVVTYST 342
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G + RVL M++ +P + +N L+ C+ G A L++M+
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 469 KLPDISVWSSLVASVCCNTADLN 491
+P V++ L+ S+C + LN
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLN 425
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 39 PNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNE 98
PNY Y +I ++ + ++++MK + + I + + + E
Sbjct: 812 PNY----VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIE 865
Query: 99 AVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAA-HILFLRSCYGWEVKSRIQSLNLL 157
++ L + Q + + + L+ ++K +LE A +L + + + + N L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 158 MDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL 209
++ LC + + A +F EM +G P+ +S+ L+KGL + +++EA LL
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 193/467 (41%), Gaps = 80/467 (17%)
Query: 18 IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE 77
+K+ + P AL +F + +E +RH+ P Y+S+I L++S + +++ ++ +
Sbjct: 56 LKEIEDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR 113
Query: 78 CKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHIL 137
C++S+F I+ Y +AG +++A+ +F ++ F+CV
Sbjct: 114 CRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVR------------------------ 149
Query: 138 FLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLC 197
IQSLN L++VL + A F P+ S++IL+KG
Sbjct: 150 ------------TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 198 NDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLK 257
+ A + M Q +V Y +L+ LC + A +LE +++K ++
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPS----VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR 253
Query: 258 APKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDK 317
P+ ++ + L +G E K
Sbjct: 254 ------------------------------------PNAVTFGLLMKGLCCKGEYNEAKK 277
Query: 318 VLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGL 377
++ +M +G P LV Y ++ L K G +DEA +++ EM K P V +YNIL+ L
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA-KLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 378 CDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPC 437
C A L +M + GC N TY +++DG CR F VL ML + P
Sbjct: 337 CTECRVPEAYRVLTEMQMK-GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 438 VETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
T+ ++ GL G A LE M + W +L++ +C
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 275 EDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMY 334
ED E A SL ++ G SYS++ L D++L +R + ++
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 335 EAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMS 394
+ K G VD+A++V + + V T++ N L+ L D G A + +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHK-ITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 395 KQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQ 454
K + N ++ IL+ G + A +V +EML P V TYN LI LC
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 455 YEAVMWLEEMISQAKLPDISVWSSLVASVCC 485
+A LE+MI + P+ + L+ +CC
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 184/393 (46%), Gaps = 14/393 (3%)
Query: 97 NEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWE---VKSRIQS 153
++A++LF+ + + + F+ + + + L L C E + I +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN----LVLDFCKQLELNGIAHNIYT 125
Query: 154 LNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMF 213
LN++++ C+C ++ A V ++ G PD +++ L+KGL + +++EA L+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV---- 181
Query: 214 WRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCND 273
R+ + G D+V Y +++ +C G A+ +L K+ + +KA I C D
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 274 GEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVM 333
G I+ A SL E +G S+ +Y+++ L G+ +G +L +M ++ P+++
Sbjct: 242 GC-IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 334 YEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKM 393
+ L K+G + EA E+ +E + +G P + YN L+ G C + A L M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 394 SKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGK 453
+ C + T+ L+ G C R + +V + R TY++L++G C GK
Sbjct: 360 VRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 454 QYEAVMWLEEMISQAKLPDISVWSSLVASVCCN 486
A +EM+S LPD+ + L+ +C N
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 201/430 (46%), Gaps = 23/430 (5%)
Query: 81 SVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLR 140
+ F T I+ G+++EAV L + + C ++N+++ + + A L LR
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL-LR 217
Query: 141 SCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDR 200
VK+ + + + ++D LC+ D A+ +F+EM+ +G +Y+ L++GLC
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 201 RLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPK 260
+ N+ LL M R +++ + LL +GK+Q+A ++ ++++ +G+ +P
Sbjct: 278 KWNDGALLLKDMVSR----EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPN 332
Query: 261 SRRHRIDLCPCNDGEDIEGAKSLINEAL---IRGGI-PSLASYSAMAIDLYNEGRIVEGD 316
+ + DG ++ S N L +R P + +++++ R+ +G
Sbjct: 333 IITYNTLM----DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 KVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKG 376
KV + +G + V Y + + G + A E+ +E MV +P V Y ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGILLDG 447
Query: 377 LCDAGNSAVAVMYLKKMSKQ---VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRS 433
LCD G A+ + + K +G V Y +++G+C+ G+ +A + + +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 434 YWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVC 493
P V TY V+I GLC G EA + L +M P+ +++L+ + DL
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTAS 562
Query: 494 RKTLEQLSSC 503
K +E++ SC
Sbjct: 563 AKLIEEMKSC 572
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 192/424 (45%), Gaps = 43/424 (10%)
Query: 41 YRHNGPVYASMIGILSESNRITEMKEVIDQMKGDSCE-------------CKDS------ 81
Y + + ++I L +++E ++D+M + C+ C+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 82 ----------------VFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++T I + R G ++ A+SLFK + + ++N+L++ +
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K +L L+ E+ + + N+L+DV + + A +++EM +G P+
Sbjct: 274 CKAGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
+Y+ LM G C RL+EA ++L M + DIV + +L+ C ++ D M
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAID 305
++ I ++GL A + C G+ I+ A+ L E + G +P + +Y +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGK-IKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 306 LYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVP 365
L + G++ + ++ ++++ +VMY + + K G V++A + KG P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KP 506
Query: 366 TVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRV 425
V Y +++ GLC G+ + A + L+KM + G N TY L+ RDG ++++
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 426 LEEM 429
+EEM
Sbjct: 566 IEEM 569
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 15/378 (3%)
Query: 114 WTQSFNT---LLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLA 170
W ++F++ +L+ + + A LF R + + S I L+ V+ + R D+
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVV 102
Query: 171 LHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRT 230
+ +F++M G P + +I+M +C + A+ L M + G D+V + +
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM----KLGFEPDLVTFTS 158
Query: 231 LLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIR 290
LL C +I+DA+ + ++IL G K + C C + + A L N+
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN-RHLNHAVELFNQMGTN 217
Query: 291 GGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEA 350
G P++ +Y+A+ L GR + +L +M + P+++ + A + A K G + EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 351 LEVIEEEMVKGTFVPTVRVYNILLKGLCDAG--NSAVAVMYLKKMSKQVGCVANGETYGI 408
E + M++ + P V Y L+ GLC G + A + YL + + GC N Y
Sbjct: 278 KE-LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN---GCYPNEVIYTT 333
Query: 409 LVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQA 468
L+ G C+ R + ++ EM + TY VLI+G C +G+ A +M S+
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 469 KLPDISVWSSLVASVCCN 486
PDI ++ L+ +CCN
Sbjct: 394 APPDIRTYNVLLDGLCCN 411
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 158/328 (48%), Gaps = 7/328 (2%)
Query: 157 LMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRI 216
L++ C R + A+ +F ++ G P+ +Y L++ LC +R LN A L F ++
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL----FNQM 214
Query: 217 SQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGED 276
GS ++V Y L+ LC+ G+ DA +L ++++ ++ + G+
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E AK L N + P + +Y ++ L G + E ++ M G +P+ V+Y
Sbjct: 275 ME-AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQ 396
+ K V++ +++ E KG T+ Y +L++G C G VA +MS +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 397 VGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYE 456
+ TY +L+DGLC +G+ +A + E M R + TY ++I+G+C +GK +
Sbjct: 393 RA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 457 AVMWLEEMISQAKLPDISVWSSLVASVC 484
A + S+ P++ ++++++ C
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFC 479
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 8/360 (2%)
Query: 117 SFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQE 176
+F +LL +++E A LF G K + + L+ LC+ R + A+ +F +
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALF-DQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 177 MDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALC 236
M G P+ +Y+ L+ GLC R +A LL M R + +++ + L+ A
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE----PNVITFTALIDAFV 269
Query: 237 DQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSL 296
GK+ +A ++ +++ + + C G ++ A+ + G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL-LDEARQMFYLMERNGCYPNE 328
Query: 297 ASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEE 356
Y+ + R+ +G K+ EM KG + + Y + G D A EV +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 357 EMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRD 416
M P +R YN+LL GLC G A+M + M K+ + N TY I++ G+C+
Sbjct: 389 -MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI-NIVTYTIIIQGMCKL 446
Query: 417 GRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVW 476
G+ +A + + + P V TY +I G C G +EA ++M LP+ SV+
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 8/359 (2%)
Query: 48 YASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLS 107
+ S++ NRI + + DQ+ G + + T IR + LN AV LF +
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 108 QFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
++N L+ + + + A L LR ++ + + L+D + +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWL-LRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
A ++ M YPD +Y L+ GLC L+EA MF+ + + G + VI
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ----MFYLMERNGCYPNEVI 330
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEA 287
Y TL+ C +++D M+I ++ +KG+ A + C G + A+ + N+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP-DVAQEVFNQM 389
Query: 288 LIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGMV 347
R P + +Y+ + L G++ + + + MR + ++V Y + + K G V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 348 DEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
++A ++ KG P V Y ++ G C G A KKM K+ G + N Y
Sbjct: 450 EDAFDLFCSLFSKG-MKPNVITYTTMISGFCRRGLIHEADSLFKKM-KEDGFLPNESVY 506
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 16/334 (4%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P ++T T L + + K + A+++F + R N Y +++ L E R +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN--GSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
++ M E F I + + G+L EA L+ + Q + ++ +L+ +
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 126 VKESKLEAAHILFL----RSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQG 181
L+ A +F CY EV L+ C+ +R + + +F EM +G
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEV-----IYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 182 CYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKI 241
+ +Y +L++G C R + A + F ++S + + DI Y LL LC GK+
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEV----FNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 242 QDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSA 301
+ A+ I E + ++ + I C G+ +E A L +G P++ +Y+
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK-VEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 302 MAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYE 335
M G I E D + +M+ GF P+ +Y+
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 196/400 (49%), Gaps = 15/400 (3%)
Query: 90 YARAGQLNEAVSLFKNLSQFN--CVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEV 147
+ R G ++ S+F +S + CVN + + L+ S+ E F RS Y
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 148 KSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATH 207
S + L++ +L + R +D+ +V++EM + P+ ++++++ LC ++N+A
Sbjct: 186 LSALSCKPLMIALLKENRSADVE-YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 208 LLYSMFWRISQKGSGEDIVIYRTLLFALCD---QGKIQDAMQILEKILRKGLKAPKSRRH 264
++ M G ++V Y TL+ C GK+ A +L++++ + +P
Sbjct: 245 VMEDM----KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV-SPNLTTF 299
Query: 265 RIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRT 324
I + +++ G+ + E L + P++ SY+++ L N G+I E + D+M +
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 325 KGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSA 384
G P+L+ Y A + K+ M+ EAL++ +G VPT R+YN+L+ C G
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA-VPTTRMYNMLIDAYCKLGKID 418
Query: 385 VAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVL 444
++M ++ G V + TY L+ GLCR+G +EA++ L + L P + T+++L
Sbjct: 419 DGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGN-IEAAKKLFDQLTSKGLPDLVTFHIL 476
Query: 445 IRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVC 484
+ G C G+ +A M L+EM P ++ ++ C
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 30/427 (7%)
Query: 51 MIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFN 110
MI +L E NR +++ V +M + F I + G++N+A + +++ +
Sbjct: 195 MIALLKE-NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 111 CVNWTQSFNTLLKEMVK---ESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRS 167
C S+NTL+ K K+ A + L+ +V + + N+L+D +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAV-LKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 168 DLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVI 227
++ VF+EM Q P+ SY+ L+ GLCN +++EA SM ++ G +++
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI----SMRDKMVSAGVQPNLIT 368
Query: 228 YRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDL-CPCNDGEDIEGAKSLINE 286
Y L+ C +++A+ + + +G P +R + + + C G+ I+ +L E
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQG-AVPTTRMYNMLIDAYCKLGK-IDDGFALKEE 426
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
G +P + +Y+ + L G I K+ D++ +KG P LV + + + G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
+A +++E M K P YNI++KG C GN A +M K+ N +Y
Sbjct: 486 SRKAAMLLKE-MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
+L+ G + G+ +A+ +L EML + P TY ++ EEM+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV----------------KEEMVD 588
Query: 467 QAKLPDI 473
Q +PDI
Sbjct: 589 QGFVPDI 595
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 9/304 (2%)
Query: 203 NEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSR 262
N L + F R G + + L+ AL + + D + ++++R+ ++
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225
Query: 263 RHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLY----NEGRIVEGDKV 318
+ + C G+ + A+ ++ + + G P++ SY+ + ID Y G++ + D V
Sbjct: 226 FNVVINALCKTGK-MNKARDVMEDMKVYGCSPNVVSYNTL-IDGYCKLGGNGKMYKADAV 283
Query: 319 LDEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLC 378
L EM P+L + + +KD + +++V +E M+ P V YN L+ GLC
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE-MLDQDVKPNVISYNSLINGLC 342
Query: 379 DAGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCV 438
+ G + A+ KM G N TY L++G C++ EA + + + P
Sbjct: 343 NGGKISEAISMRDKMV-SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 439 ETYNVLIRGLCSIGKQYEAVMWLEEMISQAKLPDISVWSSLVASVCCNTADLNVCRKTLE 498
YN+LI C +GK + EEM + +PD+ ++ L+A +C N ++ +K +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-GNIEAAKKLFD 460
Query: 499 QLSS 502
QL+S
Sbjct: 461 QLTS 464
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L T L K + ++K+FKE ++ + + N Y S+I L +I+E
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ--DVKPNVISYNSLINGLCNGGKISEAI 351
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
+ D+M + + I + + L EA+ +F ++ V T+ +N L+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K K++ L + + + N L+ LC+ + A +F ++ +G PD
Sbjct: 412 CKLGKIDDGFAL-KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PD 469
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
++HILM+G C +A LL M S+ G + Y ++ C +G ++ A
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEM----SKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 246 QILEKILRKGLKAPKSRRHRIDLCPCN-------DGEDIEGAKSLINEALIRGGIPSLAS 298
+ ++ K RR R+++ N +E A L+NE L +G +P+ +
Sbjct: 526 NMRTQM-------EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 299 YSAMAIDLYNEGRIVEGDKVLDEMRTK 325
Y + ++ ++G + + + L + TK
Sbjct: 579 YEIVKEEMVDQGFVPDIEGHLFNVSTK 605
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 200/455 (43%), Gaps = 10/455 (2%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y MI + + + + + ++MK + + I + + G+L++ V F+ +
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRR 166
C ++N L+ K KL + F R G +K + S + L+D C+
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIG-LEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 167 SDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIV 226
A+ + +M G P+ +Y L+ C L++A L M Q G ++V
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML----QVGVEWNVV 438
Query: 227 IYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGAKSLINE 286
Y L+ LCD ++++A ++ K+ G+ P + + ++++ A L+NE
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGV-IPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 287 ALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAALFKDGM 346
RG P L Y L + +I V++EM+ G + ++Y + A FK G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 347 VDEALEVIEEEMVKGTFVPTVRVYNILLKGLCDAGNSAVAVMYLKKMSKQVGCVANGETY 406
E L +++E M + TV + +L+ GLC + AV Y ++S G AN +
Sbjct: 558 PTEGLHLLDE-MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 407 GILVDGLCRDGRFLEASRVLEEMLIRSYWPCVETYNVLIRGLCSIGKQYEAVMWLEEMIS 466
++DGLC+D + A+ + E+M+ + P Y L+ G G EA+ ++M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 467 QAKLPDISVWSSLVASVC-CNTADLNVCRKTLEQL 500
D+ ++SLV + CN L R LE++
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCN--QLQKARSFLEEM 709
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 224/526 (42%), Gaps = 57/526 (10%)
Query: 9 LTPTYLSQI-IKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMKEV 67
L P ++ ++ ++ ++ P A K FK + + ++H+ Y + IL + + V
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 68 IDQM---KGDSCECKD-------------SVFATAIRTYARAGQLNEAVSLFKNLSQFNC 111
+ +M K D C+ D VF G L EA+ F + +F
Sbjct: 165 LKEMVLSKAD-CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 112 VNWTQSFNTLLKEMVKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLAL 171
T+S N LL K K + F + G + + + N+++D +C+ + A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVK-RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 172 HVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSM------------------- 212
+F+EM F+G PD +Y+ ++ G RL++ M
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 213 -----------FWRISQKGSG--EDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAP 259
F+R KG+G ++V Y TL+ A C +G +Q A++ + R GL
Sbjct: 343 CKFGKLPIGLEFYR-EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 260 KSRRHRIDLCPCNDGEDIEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVL 319
+ + C G ++ A L NE L G ++ +Y+A+ L + R+ E +++
Sbjct: 402 EYTYTSLIDANCKIG-NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 320 DEMRTKGFWPSLVMYEAKLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLKGLCD 379
+M T G P+L Y A + K +D ALE++ E +G P + +Y + GLC
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCS 519
Query: 380 AGNSAVAVMYLKKMSKQVGCVANGETYGILVDGLCRDGRFLEASRVLEEMLIRSYWPCVE 439
A + + +M K+ G AN Y L+D + G E +L+EM V
Sbjct: 520 LEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 440 TYNVLIRGLCSIGKQYEAVMWLEEMISQAKL-PDISVWSSLVASVC 484
T+ VLI GLC +AV + + + L + +++++++ +C
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 6 PRLLTPTYLSQIIKKQKSPLTALKIFKEAKEKYPNYRHNGPVYASMIGILSESNRITEMK 65
P L + L K K+ AL++ E K + + + +Y + I L +I K
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGR--GIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 66 EVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNLSQFNCVNWTQSFNTLLKEM 125
V+++MK + ++ T + Y ++G E + L + + + +F L+ +
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 126 VKESKLEAAHILFLRSCYGWEVKSRIQSLNLLMDVLCQCRRSDLALHVFQEMDFQGCYPD 185
K + A F R + +++ ++D LC+ + + A +F++M +G PD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 186 RESYHILMKGLCNDRRLNEATHLLYSMFWRISQKGSGEDIVIYRTLLFALCDQGKIQDAM 245
R +Y LM G + EA L M ++ G D++ Y +L++ L ++Q A
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKM----AEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 246 QILEKILRKGL 256
LE+++ +G+
Sbjct: 704 SFLEEMIGEGI 714
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 139/313 (44%), Gaps = 11/313 (3%)
Query: 44 NGPVYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLF 103
N Y ++I L ++ R+ E +E+ +M + + I + +A ++ A+ L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 104 KNLSQFNCVNWTQSFNTLLKEMVKESKLEAAHILF--LRSCYGWEVKSRIQSLNLLMDVL 161
L + T + + K+EAA ++ ++ C G + S I + LMD
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTT--LMDAY 552
Query: 162 CQCRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLLYSMFWRISQK-G 220
+ LH+ EM ++ +L+ GLC ++ +++A F RIS G
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV----DYFNRISNDFG 608
Query: 221 SGEDIVIYRTLLFALCDQGKIQDAMQILEKILRKGLKAPKSRRHRIDLCPCNDGEDIEGA 280
+ I+ ++ LC +++ A + E++++KGL ++ + G +E A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE-A 667
Query: 281 KSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEAKLAA 340
+L ++ G L +Y+++ L + ++ + L+EM +G P V+ + L
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 341 LFKDGMVDEALEV 353
++ G +DEA+E+
Sbjct: 728 HYELGCIDEAVEL 740
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 149/399 (37%), Gaps = 75/399 (18%)
Query: 47 VYASMIGILSESNRITEMKEVIDQMKGDSCECKDSVFATAIRTYARAGQLNEAVSLFKNL 106
Y ++I + ++ E +MKG+ + ++T + + + G + +A+ + ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 107 SQFNCVNWTQSFNTLLKEMVKESKLEAAHIL---FLRSCYGWEVKSRIQSLNLLMDVLCQ 163
+ V ++ +L+ K L A L L+ W V + L+D LC
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV----VTYTALIDGLCD 449
Query: 164 CRRSDLALHVFQEMDFQGCYPDRESYHILMKGLCNDRRLNEATHLL-------------- 209
R A +F +MD G P+ SY+ L+ G + ++ A LL
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 210 YSMF-W----------------RISQKGSGEDIVIYRTLLFALCDQGKIQDAMQILEK-- 250
Y F W + + G + +IY TL+ A G + + +L++
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 251 ------------ILRKGLKAPKSRRHRIDLCP----------------------CNDGED 276
+L GL K +D C D +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ- 628
Query: 277 IEGAKSLINEALIRGGIPSLASYSAMAIDLYNEGRIVEGDKVLDEMRTKGFWPSLVMYEA 336
+E A +L + + +G +P +Y+++ + +G ++E + D+M G L+ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 337 KLAALFKDGMVDEALEVIEEEMVKGTFVPTVRVYNILLK 375
+ L + +A +EE + +G V ++L K
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,370,318
Number of Sequences: 539616
Number of extensions: 7102874
Number of successful extensions: 24771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 16930
Number of HSP's gapped (non-prelim): 2302
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)