BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043205
(207 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 254 bits (648), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 156/221 (70%), Gaps = 19/221 (8%)
Query: 1 MEGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60
M+ I+H++V VNG+NMH+AE G+GP ILF+HGFPELWYSWRHQ+ LA GYRAVAPDLR
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GY--------------TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPD 106
GY + H + D+V L++ +APN+EK+FVV HDWGA +AW LCLFRPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 107 RVKALVNMSVTFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIET 166
+VKALVN+SV F +P +V +E L+A YG+D+Y+ RFQ PGEIEAEFA IG ++
Sbjct: 128 KVKALVNLSVHFSKRNPKMNV-----VEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKS 182
Query: 167 IIKEFFTFWTPGLIILPKGKRFGHPPDVPIALPSWFSEEDV 207
++K+ T+ P PKGK PD P+AL SW SEE++
Sbjct: 183 VLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEEL 223
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 252 bits (644), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 156/221 (70%), Gaps = 19/221 (8%)
Query: 1 MEGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60
M+ I+H++V VNG+NMH+AE G+GP ILF+HGFPELWYSWRHQ+ LA GYRAVAPDLR
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GY--------------TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPD 106
GY + H + D+V L++ +APN+EK+FVV HDWGA +AW LCLFRPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 107 RVKALVNMSVTFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIET 166
+VKALVN+SV F +P +V +E L+A +G+D+Y+ RFQ PGEIEAEFA IG ++
Sbjct: 128 KVKALVNLSVHFSKRNPKMNV-----VEGLKAIFGEDHYISRFQVPGEIEAEFAPIGAKS 182
Query: 167 IIKEFFTFWTPGLIILPKGKRFGHPPDVPIALPSWFSEEDV 207
++K+ T+ P PKGK PD P+AL SW SEE++
Sbjct: 183 VLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEEL 223
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYT---------- 63
+ +H E G GP + HGFPE WYSWR+QI ALA GYR +A D++GY
Sbjct: 248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 307
Query: 64 -CFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHF 121
C + ++V +D + + + +GHDWG + W++ LF P+RV+A+ +++ F
Sbjct: 308 YCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPA 365
Query: 122 DPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIETIIKEFFTFWTPGLII 181
+PN S +E+++A DY + FQ+PG EAE Q + K F ++
Sbjct: 366 NPNMS-----PLESIKANPVFDYQL-YFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLS 418
Query: 182 LPK----GKRFGHPPDVPIALPSWFSEEDV 207
+ K G F + P+ P +L +EE++
Sbjct: 419 MHKVCEAGGLFVNSPEEP-SLSRMVTEEEI 447
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYT---------- 63
+ +H E G GP + HGFPE WYSWR+QI ALA GYR +A D++GY
Sbjct: 29 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 88
Query: 64 -CFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHF 121
C + ++V +D + + + +GHDWG + W++ LF P+RV+A+ +++ F
Sbjct: 89 YCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPA 146
Query: 122 DPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIETIIKEFFTFWTPGLII 181
+PN S +E+++A DY + FQ+PG EAE Q + K F ++
Sbjct: 147 NPNMS-----PLESIKANPVFDYQL-YFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLS 199
Query: 182 LPK----GKRFGHPPDVPIALPSWFSEEDV 207
+ K G F + P+ P +L +EE++
Sbjct: 200 MHKVCEAGGLFVNSPEEP-SLSRMVTEEEI 228
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYT---------- 63
+ +H E G GP + HGFPE WYSWR+QI ALA GYR +A D++GY
Sbjct: 44 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 103
Query: 64 -CFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHF 121
C + ++V +D + + + +GHDWG + W++ LF P+RV+A+ +++ F
Sbjct: 104 YCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPA 161
Query: 122 DPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIETIIKEFFTFWTPGLII 181
+PN S +E+++A DY + FQ+PG EAE Q + K F ++
Sbjct: 162 NPNMS-----PLESIKANPVFDYQL-YFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLS 214
Query: 182 LPK----GKRFGHPPDVPIALPSWFSEEDV 207
+ K G F + P+ P +L +EE++
Sbjct: 215 MHKVCEAGGLFVNSPEEP-SLSRMVTEEEI 243
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 98/204 (48%), Gaps = 35/204 (17%)
Query: 6 HRIVKVNGINMHVAEKG----QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
HRI+ G +H QGP+++ LHGFPE WYSWRHQI ALA GYR VA D RG
Sbjct: 11 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 70
Query: 62 YTCFHG------------IADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVK 109
Y + D+VG++D E+ FVVGHDWGA +AW PDR
Sbjct: 71 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGA--EQAFVVGHDWGAPVAWTFAWLHPDRCA 128
Query: 110 ALVNMSVTFDHFDPNTSVSNNKRIEALRAYYGD----DYYMCRFQKPGEI--EAEFA-QI 162
+V +SV F + I + +G+ DY++ PG + + FA Q
Sbjct: 129 GVVGISVPF---------AGRGVIGLPGSPFGERRPSDYHL-ELAGPGRVWYQDYFAVQD 178
Query: 163 GIETIIKEFFTFWTPGLIILPKGK 186
GI T I+E W GL G+
Sbjct: 179 GIITEIEEDLRGWLLGLTYTVSGE 202
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 98/204 (48%), Gaps = 35/204 (17%)
Query: 6 HRIVKVNGINMHVAEKG----QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
HRI+ G +H QGP+++ LHGFPE WYSWRHQI ALA GYR VA D RG
Sbjct: 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 64
Query: 62 YTCFHG------------IADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVK 109
Y + D+VG++D E+ FVVGHDWGA +AW PDR
Sbjct: 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGA--EQAFVVGHDWGAPVAWTFAWLHPDRCA 122
Query: 110 ALVNMSVTFDHFDPNTSVSNNKRIEALRAYYGD----DYYMCRFQKPGEI--EAEFA-QI 162
+V +SV F + I + +G+ DY++ PG + + FA Q
Sbjct: 123 GVVGISVPF---------AGRGVIGLPGSPFGERRPSDYHL-ELAGPGRVWYQDYFAVQD 172
Query: 163 GIETIIKEFFTFWTPGLIILPKGK 186
GI T I+E W GL G+
Sbjct: 173 GIITEIEEDLRGWLLGLTYTVSGE 196
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 4 IQHRIVKVN-GINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
+ H V V GI +H E G GP + HGFPE W+SWR+QI ALA G+R +A D++GY
Sbjct: 235 VSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGY 294
Query: 63 TCFHG------------IADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
++V +D + + +GHDW M W + LF P+RV+A
Sbjct: 295 GDSSSPPEIEEYAMELLCKEMVTFLDKLG--IPQAVFIGHDWAGVMVWNMALFYPERVRA 352
Query: 111 LVNMSVTFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEAEFAQIGIETIIKE 170
+ +++ F DP+ VS K I ++ + Y FQ+PG EAE + + K
Sbjct: 353 VASLNTPFMPPDPD--VSPMKVIRSIPVF----NYQLYFQEPGVAEAELEK-NMSRTFKS 405
Query: 171 FF 172
FF
Sbjct: 406 FF 407
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
Length = 309
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 7 RIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG----- 61
R V+V G + ++G G +LFLHG P Y WR+ I + + GYRAVAPDL G
Sbjct: 12 RTVEVEGATIAYVDEGSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDSA 71
Query: 62 -----YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALV 112
Y +A G ID + +D + + HDWG+ + PDRV A+
Sbjct: 72 KPDIEYRLQDHVAYXDGFIDALGLDDXVLVI--HDWGSVIGXRHARLNPDRVAAVA 125
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 2 EGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
E +H V++ + +H +G GP +L LHG+P W+ W I LA Y + PDLRG
Sbjct: 7 EDFKHYEVQLPDVKIHYVREGAGPTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRG 65
Query: 62 --------------YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDR 107
Y+ D L+D A EK +VVGHD+ A + DR
Sbjct: 66 FGDSEKPDLNDLSKYSLDKAADDQAALLD--ALGIEKAYVVGHDFAAIVLHKFIRKYSDR 123
Query: 108 V 108
V
Sbjct: 124 V 124
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---------TCFHGIADLVGLI 75
PV+L +HG E +W+ LA+ GYR VAPDL G+ T + + L +
Sbjct: 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQID 86
Query: 76 DIVAP-NDEKMFVVGHDWGAFMAWFLCLFRPDRVKALV 112
++ D+ + +VGH GA +A + RP ++K L+
Sbjct: 87 RVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELI 124
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTC 64
+ IV +++ + G G +L LHG+P+ W H+I L + + VA DLRGY
Sbjct: 6 EQTIVDTTEARINLVKAGHGAPLLLLHGYPQTHVMW-HKIAPLLANNFTVVATDLRGYGD 64
Query: 65 FHGIADLVGLID----IVAPND---------EKMFVVGHDWGAFMAWFLCLFRPDRVKAL 111
A + I+ ++A + E+ +VVGHD GA +A L L P RVK L
Sbjct: 65 SSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKL 124
Query: 112 VNMSVTFDH 120
+ + H
Sbjct: 125 ALLDIAPTH 133
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 1 MEGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60
+ G + + + + VA KG GP +L LHG+P+ +W H+I + Y V DLR
Sbjct: 8 LPGFDYLTLHTSAARLRVAVKGSGPPLLLLHGYPQTHLAW-HRIAPRLAEDYSVVLADLR 66
Query: 61 GYTCFHGIADLVGLIDIVAPND-----------EKMFVVGHDWGAFMAWFLCLFRPDRVK 109
GY + + A E+ V+GHD GA + + L L P V
Sbjct: 67 GYGESRALDEEGADYSKAALARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVA 126
Query: 110 ALVNMSVT 117
A V+++V
Sbjct: 127 AFVSLTVV 134
>pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|A Chain A, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|B Chain B, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|F Chain F, Crystal Structure Of Dbja (His-Dbja)
Length = 316
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 4 IQHRIVKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
I+ R V G +M E G PV+LFLHG P + WR+ I L S +APDL G
Sbjct: 7 IEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIG 65
Query: 62 Y------TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVN 113
+ + D V +D I ++V DWG +A+ L RPD V+ L
Sbjct: 66 FGQSGKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAF 125
Query: 114 MSV-----TFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEA 157
M T+ F EA RA + +F+ PGE EA
Sbjct: 126 MEFIRPMPTWQDFHHTEVAEEQDHAEAARAVF------RKFRTPGEGEA 168
>pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2M|B Chain B, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2N|A Chain A, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|B Chain B, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|E Chain E, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|F Chain F, Crystal Structure Of Dbja (Wild Type Type Ii P21)
Length = 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 4 IQHRIVKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
I+ R V G +M E G PV+LFLHG P + WR+ I L S +APDL G
Sbjct: 7 IEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIG 65
Query: 62 Y------TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVN 113
+ + D V +D I ++V DWG +A+ L RPD V+ L
Sbjct: 66 FGQSGKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAF 125
Query: 114 MSV-----TFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEA 157
M T+ F EA RA + +F+ PGE EA
Sbjct: 126 MEFIRPMPTWQDFHHTEVAEEQDHAEAARAVF------RKFRTPGEGEA 168
>pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
pdb|1Y37|B Chain B, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
Length = 304
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 2 EGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
EG + R+V V + ++ G GP +L LHGFP+ + W ++ L + Y V DLRG
Sbjct: 3 EGFERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWA-RVAPLLANEYTVVCADLRG 61
Query: 62 YTCFHGIADLVGLID-------IVAPND---------EKMFVVGHDWGAFMAWFLCLFRP 105
Y G + VG D +A + E+ +VGHD G + L P
Sbjct: 62 YG---GSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHP 118
Query: 106 DRVKALVNMSV 116
D V +L + +
Sbjct: 119 DSVLSLAVLDI 129
>pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta)
pdb|3A2L|B Chain B, Crystal Structure Of Dbja (Mutant Dbja Delta)
Length = 309
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 4 IQHRIVKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
I+ R V G +M E G PV+LFLHG P + WR+ I L S +APDL G
Sbjct: 7 IEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIG 65
Query: 62 Y------TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVN 113
+ + D V +D I ++V DWG +A+ L RPD V+ L
Sbjct: 66 FGQSGKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAF 125
Query: 114 MSVTFDHFDPNTSVSNNKRIEALRAYYGDDYYMCRFQKPGEIEA 157
M F P + EA RA + +F+ PGE EA
Sbjct: 126 ME--FIRPMPTWQDFHQDHAEAARAVF------RKFRTPGEGEA 161
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV-- 116
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIR 133
Query: 117 ---TFDHFDPNTSVSNNKRIEALRAYY 140
T+D F EA R +
Sbjct: 134 PIPTWDEFHHTEVAEEQDHAEAARETF 160
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV-- 116
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIR 133
Query: 117 ---TFDHFDPNTSVSNNKRIEALRAYY 140
T+D F EA R +
Sbjct: 134 PIPTWDEFHHTEVAEEQDHAEAARETF 160
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG-----------Y 62
IN + +EK ++FLHG Y WRH + + + R + PDL G Y
Sbjct: 33 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSGKSGNGSY 91
Query: 63 TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFD 119
L +++ +K+ VGHDWGA +A+ DR+KA+V+M D
Sbjct: 92 RLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVD 147
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 3 GIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
G + +V+G+ +H + GQGP+++ +HGF + WY W HQ+ + + +APDL G
Sbjct: 9 GFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEW-HQLMPELAKRFTVIAPDLPG 66
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG-----------Y 62
IN + +EK ++FLHG Y WRH + + + R + PDL G Y
Sbjct: 33 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSGKSGNGSY 91
Query: 63 TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFD 119
L +++ +K+ VGHDWGA +A+ DR+KA+V+M D
Sbjct: 92 RLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVD 147
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG-----------Y 62
IN + +EK ++FLHG Y WRH + + + R + PDL G Y
Sbjct: 34 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSGKSGNGSY 92
Query: 63 TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFD 119
L +++ +K+ VGHDWGA +A+ DR+KA+V+M D
Sbjct: 93 RLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVD 148
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 3 GIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
G + +V+G+ +H + GQGP+++ +HGF + WY W HQ+ + + +APDL G
Sbjct: 9 GFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEW-HQLMPELAKRFTVIAPDLPG 66
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 3 GIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
G + +V+G+ +H + GQGP+++ +HGF + WY W HQ+ + + +APDL G
Sbjct: 9 GFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEW-HQLMPELAKRFTVIAPDLPG 66
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG-----------Y 62
IN + +EK ++FLHG Y WRH + + + R + PDL G Y
Sbjct: 34 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGMGKSGKSGNGSY 92
Query: 63 TCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFD 119
L +++ +K+ VGHDWGA +A+ DR+KA+V+M D
Sbjct: 93 RLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVD 148
>pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
pdb|3B12|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
Length = 304
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 2 EGIQHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61
EG + R+V V + ++ G GP +L LHGFP+ + W ++ L + Y V DLRG
Sbjct: 3 EGFERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWA-RVAPLLANEYTVVCADLRG 61
Query: 62 YTCFHGIADLVGLID-------IVAPND---------EKMFVVGHDWGAFMAWFLCLFRP 105
Y G + VG D +A + E+ +VGH G + L P
Sbjct: 62 YG---GSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHP 118
Query: 106 DRVKALVNMSV 116
D V +L + +
Sbjct: 119 DSVLSLAVLDI 129
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEAVGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 71 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 127
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 74 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 130
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 9 VKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY---- 62
V+V G MH + G G +LFLHG P Y WR+ I +A +R +APDL G
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 63 --TCFHGIADLVGLID--IVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ D V +D I A E++ +V HDWG+ + + P+RVK + M
Sbjct: 71 KPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACME 127
>pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr
pdb|1BEZ|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr At Ph 5
Length = 310
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ LI+ + + + +V DWG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNA 149
>pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride
Length = 310
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ LI+ + + + +V DWG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNA 149
>pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDD|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDE|A Chain A, Refined X-Ray Structures Of Haloalkane Dehalogenase At Ph
6.2 And Ph 8.2 And Implications For The Reaction
Mechanism
pdb|2DHC|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2DHE|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2EDA|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2EDC|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2HAD|A Chain A, Crystal Structure Of Haloalkane Dehalogenase: An Enzyme To
Detoxify Halogenated Alkanes
pdb|2PKY|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
pdb|2YXP|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
Length = 310
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ LI+ + + + +V DWG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNA 149
>pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of
Bromide
pdb|1BE0|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Acetic Acid
Length = 310
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ LI+ + + + +V DWG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNA 149
>pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
pdb|1HDE|B Chain B, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
Length = 310
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT 117
D L+ LI+ + + + +V DWG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAC 150
Query: 118 F 118
Sbjct: 151 L 151
>pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3E3A|B Chain B, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3HSS|A Chain A, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HSS|B Chain B, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HYS|A Chain A, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HYS|B Chain B, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HZO|A Chain A, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
pdb|3HZO|B Chain B, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
Length = 293
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWR-HQITALASLGYRAVAPDLR---------GYT 63
IN+ + G G ++F+ G +W HQ+ A + GYR + D R G+T
Sbjct: 33 INLAYDDNGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFT 92
Query: 64 CFHGIADLVGLIDI--VAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
+AD LI+ +AP VVG GAF+A L + P+ V + V M+
Sbjct: 93 TQTMVADTAALIETLDIAPAR----VVGVSMGAFIAQELMVVAPELVSSAVLMAT 143
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
+G+ + + GQG ++F+HG+P +W+ Q+ A+ GYR +A D RG+
Sbjct: 7 DGVEIFYKDWGQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGH 57
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I+++ + G G ++ +HGFP +SW Q AL GYR + D RG+
Sbjct: 11 TSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGF 61
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I+++ + G G ++ +HGFP +SW Q AL GYR + D RG+
Sbjct: 11 TSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGF 61
>pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I
Length = 297
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 12 NGINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGI 68
G+ MH ++G L LHG P + +R + + G R VAPDL G+
Sbjct: 31 EGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKP 90
Query: 69 AD------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ +D + E++ +V DWG + L + RP V L+ M+
Sbjct: 91 TDDAVYTFGFHRRSLLAFLDAL--QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNT 148
Query: 117 TFDHFDPNTSVSNNKRIEALRAYYGD--DYYMCRFQK---PGEIEAEFA 160
+S K E+ R + + D + + + PG +AE A
Sbjct: 149 AL-----AVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVA 192
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I+++ + G G ++ +HGFP +SW Q AL GYR + D RG+
Sbjct: 11 TSIDLYYEDHGAGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGF 61
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I+++ + G G ++ +HGFP +SW Q AL GYR + D RG+
Sbjct: 12 TSIDLYYEDHGTGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGF 62
>pdb|2QVB|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
pdb|2QVB|B Chain B, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
Length = 297
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTC 64
Q + +++ G M ++G+G I+F HG P Y WR+ + L LG R VA DL G
Sbjct: 9 QPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGA 67
Query: 65 FHGIAD--------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
++ L L D + D + V+ HDWG+ + + DRV+
Sbjct: 68 SDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVL-HDWGSALGFDWANQHRDRVQG 126
Query: 111 LVNMSV 116
+ M
Sbjct: 127 IAFMEA 132
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 11/120 (9%)
Query: 7 RIVKVNGINMHVAEKGQGPVILFLHGFPE---------LWYSWRHQITALASLGYRAVAP 57
R V + I ++V EKG GP+ LF HG + S R A+ G+
Sbjct: 51 RRVDIGRITLNVREKGSGPLXLFFHGITSNSAVFEPLXIRLSDRFTTIAVDQRGHGLSDK 110
Query: 58 DLRGYTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT 117
GY D+ GLI +A +VGH GA + PD V+++V + T
Sbjct: 111 PETGYEANDYADDIAGLIRTLARG--HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFT 168
>pdb|2O2H|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With
1,2-Dichloroethane
pdb|2O2I|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With 1,3-Propandiol
Length = 300
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTC 64
Q + +++ G M ++G+G I+F HG P Y WR+ + L LG R VA DL G
Sbjct: 11 QPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGA 69
Query: 65 FHGIAD--------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
++ L L D + D + V+ HDWG+ + + DRV+
Sbjct: 70 SDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVL-HDWGSALGFDWANQHRDRVQG 128
Query: 111 LVNMSV 116
+ M
Sbjct: 129 IAFMEA 134
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In
P. Fluorescens Esterase
Length = 271
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
V +G ++ + G G +LF HG+P W +Q+ L+S GYR +A D RG+
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGF 57
>pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
Length = 310
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Query: 13 GINMHVAEKGQGP---VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIA 69
G+ H ++G V L LHG P Y +R I A G R +APD G+
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 D------------LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
D L+ LI+ + + + +V WG F+ L + P R K L+ M+
Sbjct: 93 DEEDYTFEFHRNFLLALIERL--DLRNITLVVQXWGGFLGLTLPMADPSRFKRLIIMNA 149
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS
ESTERASE
Length = 271
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
V +G ++ + G G +LF HG+P W +Q+ L+S GYR +A D RG+
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGF 57
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 13 GINMHVAEKGQGPVILFLHGFP---ELWYSWRHQITALASLGYRAVAPDLRG-------- 61
G+ + + G+G ++ +HG + +WR I AL+ YR +APD+ G
Sbjct: 14 GVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGFTDRPE 72
Query: 62 ---YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTF 118
Y+ + ++G++D A EK +VG+ +G +A L +RV +V M
Sbjct: 73 NYNYSKDSWVDHIIGIMD--ALEIEKAHIVGNSFGGGLAIATALRYSERVDRMVLMGAVG 130
Query: 119 DHFD 122
FD
Sbjct: 131 TRFD 134
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I ++ + G G ++ +HG+P SW +Q+ AL GYR + D RG+
Sbjct: 17 IEIYYEDHGTGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGF 65
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 17/121 (14%)
Query: 15 NMHVAEKGQGPVILFLHGFP--ELWYSWRHQITALASLGYRAVAPDLRG----------- 61
N H +GQ PVIL P + +WR I AL+ YR +APD+ G
Sbjct: 18 NYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGFTDRPENYN 75
Query: 62 YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHF 121
Y+ + ++G++D A EK +VG+ +G +A L +RV +V M F
Sbjct: 76 YSKDSWVDHIIGIMD--ALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRF 133
Query: 122 D 122
D
Sbjct: 134 D 134
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 12 NGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
+G ++ + G G I+F HG+P SW Q+ LA+ GYR +A D RG+
Sbjct: 7 DGTQIYYKDWGSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGH 57
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
Length = 279
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 14 INMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
I ++ ++G G ++ +HG+P +SW Q L + GYR + D RG+
Sbjct: 13 IELYYEDQGSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGF 61
>pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane
pdb|1G4H|A Chain A, Linb Complexed With Butan-1-Ol
pdb|1G42|A Chain A, Structure Of 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene
Hydrolase (Linb) From Sphingomonas Paucimobilis
Complexed With 1,2-Dichloropropane
Length = 296
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG--- 61
+ + +++ G M ++G G ILF HG P Y WR+ + A LG R +A DL G
Sbjct: 10 EKKFIEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGD 68
Query: 62 -----------YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
Y L L + + D + VV HDWG+ + + +RV+
Sbjct: 69 SDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVV-HDWGSALGFDWARRHRERVQG 127
Query: 111 LVNMSV 116
+ M
Sbjct: 128 IAYMEA 133
>pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At
1.6 A Resolution
pdb|1IZ8|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
With 1,3-Propanediol, A Product Of Debromidation Of
Dibrompropane, At 2.0a Resolution
pdb|1K5P|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.8a Resolution
pdb|1K63|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis With Ut26
2-Bromo-2-Propene-1-Ol At 1.8a Resolution
pdb|1K6E|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,2-Propanediol
(Product Of Dehalogenation Of 1,2-Dibromopropane) At
1.85a
Length = 295
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG--- 61
+ + +++ G M ++G G ILF HG P Y WR+ + A LG R +A DL G
Sbjct: 9 EKKFIEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGD 67
Query: 62 -----------YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
Y L L + + D + VV HDWG+ + + +RV+
Sbjct: 68 SDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVV-HDWGSALGFDWARRHRERVQG 126
Query: 111 LVNMSV 116
+ M
Sbjct: 127 IAYMEA 132
>pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas
Paucimobilis Ut26 At Atomic Resolution
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG--- 61
+ + +++ G M ++G G ILF HG P Y WR+ + A LG R +A DL G
Sbjct: 10 EKKFIEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGD 68
Query: 62 -----------YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
Y L L + + D + VV HDWG+ + + +RV+
Sbjct: 69 SDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVV-HDWGSALGFDWARRHRERVQG 127
Query: 111 LVNMSV 116
+ M
Sbjct: 128 IAYMEA 133
>pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.6 A Resolution
pdb|1D07|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 With 1,3-Propanediol, A Product Of
Debromidation Of Dibrompropane, At 2.0a Resolution
pdb|2BFN|A Chain A, The Crystal Structure Of The Complex Of The Haloalkane
Dehalogenase Linb With The Product Of Dehalogenation
Reaction 1,2-Dichloropropane
Length = 296
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 5 QHRIVKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG--- 61
+ + +++ G M ++G G ILF HG P Y WR+ + A LG R +A DL G
Sbjct: 10 EKKFIEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGD 68
Query: 62 -----------YTCFHGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKA 110
Y L L + + D + VV HDWG+ + + +RV+
Sbjct: 69 SDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVV-HDWGSALGFDWARRHRERVQG 127
Query: 111 LVNMSV 116
+ M
Sbjct: 128 IAYMEA 133
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY------------TCFHGIA 69
G GP +L LHGFP+ W H++ + ++ + DL GY T + A
Sbjct: 31 GDGPPLLLLHGFPQTHVMW-HRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 70 DLVGLIDIVAPNDEKMF-VVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
LI+ + F + GHD GA +++ L L P R+ L + +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY------------TCFHGIA 69
G GP +L LHGFP+ W H++ + ++ + DL GY T + A
Sbjct: 31 GDGPPLLLLHGFPQTHVMW-HRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 70 DLVGLIDIVAPNDEKMF-VVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
LI+ + F + GHD GA +++ L L P R+ L + +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3P2M|A Chain A, Crystal Structure Of A Novel Esterase Rv0045c From
Mycobacterium Tuberculosis
Length = 330
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 16/122 (13%)
Query: 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG-----------YTCFHGIAD 70
G P ++FLHG + ++W T + LG A+A DL G Y+
Sbjct: 79 GSAPRVIFLHGGGQNAHTWD---TVIVGLGEPALAVDLPGHGHSAWREDGNYSPQLNSET 135
Query: 71 LVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNTSVSNN 130
L ++ +AP E FVVG G A L PD V LV + VT + ++
Sbjct: 136 LAPVLRELAPGAE--FVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAE 193
Query: 131 KR 132
+R
Sbjct: 194 QR 195
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Query: 20 EKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIVA 79
+K G IL HG +W I LA GYR +A D G+ A +A
Sbjct: 42 KKANGRTILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLA 101
Query: 80 PNDEKMF---------VVGHDWGAFMAWFLCLFRPDRVKALV 112
N + V+GH G +A L P +V+ LV
Sbjct: 102 ANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLV 143
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
V +G ++ + G G +LF HG+ W +Q+ L+S GYR +A D RG+
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGF 57
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
V +G ++ + G G +LF HG+ W +Q+ L+S GYR +A D RG+
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGF 57
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
V +G ++ + G G +LF HG+ W +Q+ L+S GYR +A D RG+
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGF 57
>pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3V|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3W|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3W|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3X|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R3X|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R40|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
pdb|3R40|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
Length = 306
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY------------TCFHGIA 69
G GP +L LHGFP+ W H++ + ++ + DL GY T + A
Sbjct: 31 GDGPPLLLLHGFPQTHVMW-HRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 70 DLVGLIDIVAPNDEKMF-VVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
LI+ + F + GH+ GA +++ L L P R+ L + +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 6 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 65
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 66 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEY 125
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 126 PDRIGKLILM 135
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 6 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 65
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 66 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEY 125
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 126 PDRIGKLILM 135
>pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
pdb|3R3Y|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
Length = 306
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY------------TCFHGIA 69
G GP +L LHGFP+ W H++ + ++ + DL GY T + A
Sbjct: 31 GDGPPLLLLHGFPQTHVMW-HRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 70 DLVGLIDIVAPNDEKMF-VVGHDWGAFMAWFLCLFRPDRVKALVNMSV 116
LI+ + F + GH GA +++ L L P R+ L + +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHXRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
Length = 268
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 27/131 (20%)
Query: 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY-TCFHGIADLVGLIDIVAPN 81
+G + +HG +SW L + G++ A DL T I +L L D P
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 62
Query: 82 ---------DEKMFVVGHDWGA--------------FMAWFLCLFRPDRVKALVNMSVTF 118
DEK+ +VGH G + A FL F PD V N S
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVH---NSSFVL 119
Query: 119 DHFDPNTSVSN 129
+ ++ T N
Sbjct: 120 EQYNERTPAEN 130
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 27/131 (20%)
Query: 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY-TCFHGIADLVGLIDIVAPN 81
+G + +HG +SW L + G++ A DL T I +L L D P
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 62
Query: 82 ---------DEKMFVVGHDWGA--------------FMAWFLCLFRPDRVKALVNMSVTF 118
DEK+ +VGH G + A FL F PD V N S
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVH---NSSFVL 119
Query: 119 DHFDPNTSVSN 129
+ ++ T N
Sbjct: 120 EQYNERTPAEN 130
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 6 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 65
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 66 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY 125
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 126 PDRIGKLILM 135
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 6 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 65
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 66 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY 125
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 126 PDRIGKLILM 135
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 6 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 65
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 66 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY 125
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 126 PDRIGKLILM 135
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 2 EGIQHRIVKVN-----GINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYR 53
E + VK+N N+H E G G ++ LH W ++ + GYR
Sbjct: 3 ESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYR 62
Query: 54 AVAPDLRGYTCFHGIA--DLVGLID-------IVAPNDEKMFVVGHDWGAFMAWFLCLFR 104
+ D G+ + + GL++ + A + ++ +VG+ G A L
Sbjct: 63 VILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEY 122
Query: 105 PDRVKALVNM 114
PDR+ L+ M
Sbjct: 123 PDRIGKLILM 132
>pdb|3RM3|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257
pdb|3RLI|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257 In Complex With Pmsf
Length = 270
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 23 QGPV-ILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIVAPN 81
GPV +L +HGF +S R A A GY P L+G+ + + D VA
Sbjct: 38 NGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASV 97
Query: 82 DE----------KMFVVGHDWGAFMAWFLCLFRPD 106
+E +FV G G + +L PD
Sbjct: 98 EEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD 132
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
PVI F HG+P W Q+ + GYR VA D RG+
Sbjct: 23 PVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGH 60
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 36 LWYSWRHQITALASLGYRAVAPDL-------RGYTCFHGIADLVG-LIDIVA--PNDEKM 85
+WY + L S G++ A DL R H D L++++A P DEK+
Sbjct: 25 IWYKLK---PLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKV 81
Query: 86 FVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNTSVS 128
++GH +G P+++ V MS DPN S++
Sbjct: 82 VLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMP--DPNHSLT 122
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 36 LWYSWRHQITALASLGYRAVAPDL-------RGYTCFHGIADLVG-LIDIVA--PNDEKM 85
+WY + L S G++ A DL R H D L++++A P DEK+
Sbjct: 25 IWYKLK---PLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKV 81
Query: 86 FVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNTSVS 128
++GH +G P+++ V MS DPN S++
Sbjct: 82 VLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMP--DPNHSLT 122
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 36 LWYSWRHQITALASLGYRAVAPDL-------RGYTCFHGIADLVG-LIDIVA--PNDEKM 85
+WY + L S G++ A DL R H D L++++A P DEK+
Sbjct: 25 IWYKLK---PLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKV 81
Query: 86 FVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNTSVS 128
++GH +G P+++ V MS DPN S++
Sbjct: 82 VLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMP--DPNHSLT 122
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 15 NMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG------------- 61
N+ V G+ ++L HGF W+H + L YR V D G
Sbjct: 27 NVKVIGSGEATIVLG-HGFGTDQSVWKHLVPHLVD-DYRVVLYDNMGAGTTNPDYFDFDR 84
Query: 62 YTCFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT--- 117
Y+ G + DL+ +++ + E VGH A + L RPD +V +S +
Sbjct: 85 YSNLEGYSFDLIAILEDLKI--ESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRY 142
Query: 118 ---FDHFDPNTSVSNNKRIEALRAYY 140
D+ N+ EA+R+ Y
Sbjct: 143 VNDVDYQGGFEQEDLNQLFEAIRSNY 168
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 36 LWYSWRHQITALASLGYRAVAPDL-------RGYTCFHGIADLVG-LIDIVA--PNDEKM 85
+WY + L S G++ A DL R H D L++++A P DEK+
Sbjct: 19 IWYKLK---PLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKV 75
Query: 86 FVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNTSVS 128
++GH +G P+++ V MS DPN S++
Sbjct: 76 VLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMP--DPNHSLT 116
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 15 NMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG------------- 61
N+ V G+ ++L HGF W+H + L YR V D G
Sbjct: 11 NVKVIGSGEATIVLG-HGFGTDQSVWKHLVPHLVD-DYRVVLYDNMGAGTTNPDYFDFDR 68
Query: 62 YTCFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT--- 117
Y+ G + DL+ +++ + E VGH A + L RPD +V +S +
Sbjct: 69 YSNLEGYSFDLIAILEDLKI--ESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRY 126
Query: 118 ---FDHFDPNTSVSNNKRIEALRAYY 140
D+ N+ EA+R+ Y
Sbjct: 127 VNDVDYQGGFEQEDLNQLFEAIRSNY 152
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 15 NMHVAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG------------- 61
N+ V G+ ++L HGF W+H + L YR V D G
Sbjct: 9 NVKVIGSGEATIVLG-HGFGTDQSVWKHLVPHLVD-DYRVVLYDNMGAGTTNPDYFDFDR 66
Query: 62 YTCFHGIA-DLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT--- 117
Y+ G + DL+ +++ + E VGH A + L RPD +V +S +
Sbjct: 67 YSNLEGYSFDLIAILEDLKI--ESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRY 124
Query: 118 ---FDHFDPNTSVSNNKRIEALRAYY 140
D+ N+ EA+R+ Y
Sbjct: 125 VNDVDYQGGFEQEDLNQLFEAIRSNY 150
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 8 IVKVNGINMHVAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGYTCF 65
+ +G N+ + G G ++F HG+P W +Q+ S GYR +A D RG
Sbjct: 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRG---- 58
Query: 66 HGIAD 70
HG +D
Sbjct: 59 HGRSD 63
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 7 RIVKVNGINMHVAEKGQGPVILFLH---GFPELWYSWRHQITALASLGYRAVAPDLRG-- 61
R V G+ E G+G ++ +H E +WR+ I LA YR +A D+ G
Sbjct: 19 RFVNAGGVETRYLEAGKGQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFG 77
Query: 62 --------YTCFHGIADLVGLIDIVAPN-DEKMFVVGHDWGAFMAWFLCLFRPDRVKALV 112
YT I L I A N D K+ +VG+ G + + + V ALV
Sbjct: 78 KTAKPDIEYTQDRRIRHLHDFIK--AMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALV 135
Query: 113 NM 114
M
Sbjct: 136 LM 137
>pdb|3FIG|A Chain A, Crystal Structure Of Leucine-bound Leua From Mycobacterium
Tuberculosis
pdb|3FIG|B Chain B, Crystal Structure Of Leucine-bound Leua From Mycobacterium
Tuberculosis
Length = 646
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWY 38
VK+NG+ ++ G GP+ F+H ++ +
Sbjct: 520 VKINGVETEISGSGNGPLAAFVHALADVGF 549
>pdb|3HPS|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Ketoisocaproate (Kic)
pdb|3HPS|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Ketoisocaproate (Kic)
pdb|3HPZ|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Bromopyruvate
pdb|3HPZ|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Bromopyruvate
pdb|3HQ1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Citrate And Mn2+
pdb|3HQ1|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Leua
Complexed With Citrate And Mn2+
Length = 644
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWY 38
VK+NG+ ++ G GP+ F+H ++ +
Sbjct: 518 VKINGVETEISGSGNGPLAAFVHALADVGF 547
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGY 62
VI F HG+P W Q+ + G+R VA D RG+
Sbjct: 28 VIHFHHGWPLSSDDWDAQLLFFVNKGFRVVAHDRRGH 64
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 19/124 (15%)
Query: 9 VKVNG-INMHVAEKGQGPVILFLHGFPELWYSWRHQITA----LASLGYRAVAPDLRGY- 62
+K+N ++M + P+ + +HGF +S I A L +G + D+ G+
Sbjct: 11 IKLNAYLDMPKNNPEKCPLCIIIHGFT--GHSEERHIVAVQETLNEIGVATLRADMYGHG 68
Query: 63 ---------TCFHGIADLVGLIDIVAPND--EKMFVVGHDWGAFMAWFLCLFRPDRVKAL 111
T F + +++ ++D D +++ GH G D +KAL
Sbjct: 69 KSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKAL 128
Query: 112 VNMS 115
+ +S
Sbjct: 129 IPLS 132
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 21 KGQGPV-ILFLHGF---PELWYSWRHQITALASLGYRAVAPDLRGYTCFHG-----IADL 71
KGQG V ++ LHG+ E+W ++++ +L DL G+ G +AD
Sbjct: 9 KGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLV----DLPGFGRSRGFGALSLADX 64
Query: 72 VGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT 117
+ AP+ K +G G +A + L P+RV+ALV ++ +
Sbjct: 65 AEAVLQQAPD--KAIWLGWSLGGLVASQIALTHPERVRALVTVASS 108
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 21 KGQGPV-ILFLHGF---PELWYSWRHQITALASLGYRAVAPDLRGYTCFHG-----IADL 71
KGQG V ++ LHG+ E+W ++++ +L DL G+ G +AD+
Sbjct: 9 KGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLV----DLPGFGRSRGFGALSLADM 64
Query: 72 VGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVT 117
+ AP+ K +G G +A + L P+RV+ALV ++ +
Sbjct: 65 AEAVLQQAPD--KAIWLGWALGGLVASQIALTHPERVQALVTVASS 108
>pdb|1SR9|A Chain A, Crystal Structure Of Leua From Mycobacterium Tuberculosis
pdb|1SR9|B Chain B, Crystal Structure Of Leua From Mycobacterium Tuberculosis
Length = 644
Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 9 VKVNGINMHVAEKGQGPVILFLHGFPELWY 38
VK+NG+ ++ G GP+ F+H ++ +
Sbjct: 518 VKINGVETEISGSGNGPLAAFVHALADVGF 547
>pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase
From Serratia Marcescens
pdb|1WM1|A Chain A, Crystal Structure Of Prolyl Aminopeptidase, Complex With
Pro-tboda
pdb|1X2B|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Sar-Tboda
pdb|1X2E|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Ala-Tboda
Length = 317
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 23 QGPVILFLHGFP---------ELWYSWRHQITALASLGYRAVAP--DLRGYTCFHGIADL 71
G +F+HG P +L+ R+++ G P L T +H +AD+
Sbjct: 36 NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADI 95
Query: 72 VGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALV 112
L ++ E+ V G WG+ +A P+RV +V
Sbjct: 96 ERLREMAGV--EQWLVFGGSWGSTLALAYAQTHPERVSEMV 134
>pdb|3PBE|A Chain A, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
pdb|3PBE|B Chain B, Crystal Structure Of The Mutant W207f Of Human Secretory
Glutaminyl Cyclase
Length = 329
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHFSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|3SI0|A Chain A, Structure Of Glycosylated Human Glutaminyl Cyclase
Length = 330
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 173 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 223
>pdb|2ZEO|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
pdb|2ZEO|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305e At 1.66 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 23 QGPVILFLHGFPELWYSWRHQITALAS-LGYRAVAPDLRGY 62
+GPV+L LHG SW A+ S + R VA DLR +
Sbjct: 37 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSH 77
>pdb|2ZEN|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
pdb|2ZEN|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
D305a At 1.78 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 23 QGPVILFLHGFPELWYSWRHQITALAS-LGYRAVAPDLRGY 62
+GPV+L LHG SW A+ S + R VA DLR +
Sbjct: 41 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSH 81
>pdb|2AFU|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2AFU|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With Glutamine T-Butyl Ester
pdb|2ZEH|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
pdb|2ZEH|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201q At 1.8 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2ZEE|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
pdb|2ZEE|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160g At 1.99 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2AFM|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFM|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 6.5
pdb|2AFO|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFO|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase At Ph 8.0
pdb|2AFW|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFW|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With N-Acetylhistamine
pdb|2AFX|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFX|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Benzylimidazole
pdb|2AFZ|A Chain A, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|2AFZ|B Chain B, Crystal Structure Of Human Glutaminyl Cyclase In Complex
With 1- Vinylimidazole
pdb|3PBB|A Chain A, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
pdb|3PBB|B Chain B, Crystal Structure Of Human Secretory Glutaminyl Cyclase In
Complex With Pbd150
Length = 329
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2ZEP|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
pdb|2ZEP|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
H319l At 2.1 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2ZED|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
pdb|2ZED|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
S160a At 1.7 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2ZEF|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
pdb|2ZEF|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201d At 1.67 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2ZEG|A Chain A, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
pdb|2ZEG|B Chain B, Crystal Structure Of The Human Glutaminyl Cyclase Mutant
E201l At 2.08 Angstrom Resolution
Length = 329
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2AFS|A Chain A, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
pdb|2AFS|B Chain B, Crystal Structure Of The Genetic Mutant R54w Of Human
Glutaminyl Cyclase
Length = 329
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 29 FLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGYTCFHGIADLVGLIDIV-APN 81
FLH P+ Y RH +AS + P RG + HG+ DL+ L+D++ APN
Sbjct: 172 FLHWSPQDSLYGSRHLAAKMASTPH---PPGARGTSQLHGM-DLLVLLDLIGAPN 222
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 66 HGIADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMSVTFDHFDPNT 125
HG++ LVG D+ D+ + + H+WG + F + N+ T+ FD +
Sbjct: 124 HGLS-LVG--DLFVNQDDTILLPEHNWGNYKLVF-------NTRNGANLQ-TYPIFDKDG 172
Query: 126 SVSNNKRIEALRAYYGDDYYMC 147
+ + +EAL++Y D M
Sbjct: 173 HYTTDSLVEALQSYNKDKVIMI 194
>pdb|3S8Y|A Chain A, Bromide Soaked Structure Of An Esterase From The
Oil-Degrading Bacterium Oleispira Antarctica
Length = 280
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 68 IADLVGLIDIVAPNDEKMFVVGHDWGAFMAWFLCLFRPDRVKALVNMS 115
+ +L LI+ + P +K + GH G A + L P+R +++ S
Sbjct: 126 VNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFS 173
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 27 ILFLHGFPELWYSWRHQIT--ALASLGYRAVAPDLRG 61
+L LHG +W++ T LA GYRAVA DL G
Sbjct: 35 VLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.144 0.475
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,107,556
Number of Sequences: 62578
Number of extensions: 294544
Number of successful extensions: 797
Number of sequences better than 100.0: 117
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 651
Number of HSP's gapped (non-prelim): 121
length of query: 207
length of database: 14,973,337
effective HSP length: 94
effective length of query: 113
effective length of database: 9,091,005
effective search space: 1027283565
effective search space used: 1027283565
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)