BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043209
(221 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 160/213 (75%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
IA D+TELIGNTP+VYLNN+ +GC R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI
Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PG++VLIE TSGNTG+G+A AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+ G
Sbjct: 65 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
+ EE+L K P + QF+NPANPK HYETTGPEIW+GT G++D F
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK++N +K+YGVEP ESAIL+GGK
Sbjct: 185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 273 bits (698), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 160/213 (75%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
IA D+TELIGNTP+VYLNN+ +GC R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI
Sbjct: 3 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PG++VLIE TSGNTG+G+A AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+ G
Sbjct: 63 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
+ EE+L K P + QF+NPANPK HYETTGPEIW+GT G++D F
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK++N +K+YGVEP ESAIL+GGK
Sbjct: 183 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 215
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 271 bits (694), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 159/213 (74%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
IA D+TELIGNTP+VYLNN+ +GC R+AAKLEMMEPCSSV DRI FSMI DAE+KGLI
Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVADRIGFSMISDAEKKGLIK 64
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PG++VLIE TSGNTG+G+A AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+ G
Sbjct: 65 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
+ EE+L K P + QF+NPANPK HYETTGPEIW+GT G++D F
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK++N +K+YGVEP ESAIL+GGK
Sbjct: 185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 163/219 (74%)
Query: 2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
G + IA+++++LIG TPMVYLN+I GC A IAAKLE+MEPC SVKDRI +SM+ DAE
Sbjct: 107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
+KG I+PGK+VL+E TSGNTGIG+A AA++GY+LIL MPA MS+E+R++L+A+GA+L+L
Sbjct: 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
T+ G+ + EE+L P ++ QF NPANPK HYETTGPEIW+ T+G+VDIF
Sbjct: 227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
F+K+KNP+ +V GVEP ES IL+GGK
Sbjct: 287 GIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 247 bits (630), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 149/219 (68%)
Query: 2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
G I +++LIG TP+VYLN + +GC A +A K EMM+P +S+KDR A++MI DAE
Sbjct: 19 GHASTNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAE 78
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
EK LITPGKT LIE TSGN GI MA AA KGYK++L MP++ SLE+R+ ++A+GA+LIL
Sbjct: 79 EKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELIL 138
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
T+ G+ + ELL P + QF NPAN + H+ETTGPEIWE T GQVDIF
Sbjct: 139 TDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVM 198
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK KNP +K+YGVEP+ES +LNGGK
Sbjct: 199 GIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 148/219 (67%)
Query: 2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
G I +++LIG TP+VYLN + +GC A +A K EMM+P +S+ DR A++MI DAE
Sbjct: 19 GHASTNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAE 78
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
EK LITPGKT LIE TSGN GI MA AA KGYK++L MP++ SLE+R+ ++A+GA+LIL
Sbjct: 79 EKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELIL 138
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
T+ G+ + ELL P + QF NPAN + H+ETTGPEIWE T GQVDIF
Sbjct: 139 TDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVM 198
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK KNP +K+YGVEP+ES +LNGGK
Sbjct: 199 GIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
N ITELIG+TP V LN IVD A + KLE M P SSVKDRIA +MI+ AE+ G + PG
Sbjct: 6 NSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG 65
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
T+ +E TSGNTGIG+A AAAKGYK +LVMP MSLE+R +L+AYGA+L+LT G+
Sbjct: 66 DTI-VEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMR 124
Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXX 189
EEL+ + F P QFKN ANP+ H TTG EI E Q+D F
Sbjct: 125 GAIAKAEELVRE-HGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTI 183
Query: 190 XXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
L++ P IK+Y VEPA+S +L+GGK
Sbjct: 184 TGAGKVLREAYPNIKIYAVEPADSPVLSGGK 214
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 194 bits (493), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
Query: 7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
+IA DIT+LIG TP+V L + DG A I AKLE P +SVKDRI +M++ AE+ GLI
Sbjct: 5 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64
Query: 67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
P T+++E TSGNTGI +A AA+GY+ +L MP MSLE+R++L+AYGA+LILT
Sbjct: 65 KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
G+ EEL F P QF+NPANP H TT E+W T G+VDI
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 187 XXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+K++ P + VEPA S +L+GG+
Sbjct: 184 GTITGVAQVIKERKPSARFVAVEPAASPVLSGGQ 217
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 130/219 (59%), Gaps = 1/219 (0%)
Query: 2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
G IA +IT+LIG TP+V L + DG A + AKLE P S+KDRI +MI AE
Sbjct: 1 GPGSMTIAENITQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAE 60
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
+ GLI P T+++E TSGNTGI +A +AA+GYK +L MP MS+E+R++L+AYGA+L+L
Sbjct: 61 KAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVL 119
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
T G+ EEL F P QF+NPANP H TT E+W T G+VDIF
Sbjct: 120 TPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVS 179
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+K++ P + VEPA S +L+GG+
Sbjct: 180 GVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQ 218
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
Query: 7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
+IA DIT+LIG TP+V L + DG A I AKLE P +SV DRI +M++ AE+ GLI
Sbjct: 5 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVXDRIGVAMLQAAEQAGLI 64
Query: 67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
P T+++E TSGNTGI +A AA+GY+ +L MP MSLE+R++L+AYGA+LILT
Sbjct: 65 KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
G+ EEL F P QF+NPANP H TT E+W T G+VDI
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 187 XXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+K++ P + VEPA S +L+GG+
Sbjct: 184 GTITGVAQVIKERKPSARFVAVEPAASPVLSGGQ 217
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 191 bits (484), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 129/219 (58%), Gaps = 1/219 (0%)
Query: 2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
G IA +I +LIG TP+V L + DG A + AKLE P S+KDRI +MI AE
Sbjct: 1 GPGSMTIAENIAQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAE 60
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
+ GLI P T+++E TSGNTGI +A +AA+GYK +L MP MS+E+R++L+AYGA+L+L
Sbjct: 61 KAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVL 119
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
T G+ EEL F P QF+NPANP H TT E+W T G+VDIF
Sbjct: 120 TPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVS 179
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+K++ P + VEPA S +L+GG+
Sbjct: 180 GVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQ 218
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 190 bits (483), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 10/210 (4%)
Query: 16 IGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK-TVLI 74
IG TP+V L +V+ A + KLE + P S+KDR A+ MIKDAEE+G++ PG V++
Sbjct: 7 IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIV 66
Query: 75 ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI----DE 130
E TSGNTGIG+A AA++GY+LIL MPA MS E++ +L+A+GA+L+LT+ E + +E
Sbjct: 67 EPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREE 126
Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXX 190
R+ EEL +F P QFKNPAN + HYETTGPE++E G++D F
Sbjct: 127 ALRLKEEL-----GAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181
Query: 191 XXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
+LK++ P +KV VEPA S +L+GGK
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGGK 211
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
+A I +LIG TP +YLN + + KA++ K+E P +SVKDR+ F++ AE++G +
Sbjct: 32 VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLI 90
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PGK+V++E +SGNTG+ +A A +GYK+I+ MP MSLE+R +L+ +GA++ILT A +G
Sbjct: 91 PGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 150
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
+ + ++++ P + QF N H ETTGPEIWE T VD F
Sbjct: 151 MKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 210
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
LKK ++ VEP ES +L+GGK
Sbjct: 211 TLTGVARALKKMGSHARIVAVEPMESPVLSGGK 243
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 126/213 (59%), Gaps = 1/213 (0%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
+A I +LIG TP +YLN + + KA++ K+E P +SV DR+ F++ AE++G +
Sbjct: 11 VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVXDRLGFAIYDKAEKEGKLI 69
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PGK++++E +SGNTG+ +A A +GYK+I+ MP MSLE+R +L+ +GA++ILT A +G
Sbjct: 70 PGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 129
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
+ + ++++ P + QF N H ETTGPEIWE T VD F
Sbjct: 130 MKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 189
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
LKK ++ VEP ES +L+GGK
Sbjct: 190 TLTGVARALKKMGSHARIVAVEPTESPVLSGGK 222
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 7/212 (3%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
I D + IG+TP+V LN I +G RI AK+E P SVK RI +MI DAE++G++
Sbjct: 3 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PG L+E T+GNTGI +A AAA+GYKL L MP MS+E+R +L+A GA L+LT G
Sbjct: 60 PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 128 IDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
+ + EE++ P + QF NPANP+ H +TTGPEIWE T GQVD+F
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 187 XXXXXXXNFLK--KKNPEIKVYGVEPAESAIL 216
++K K ++ VEP +S ++
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 7/212 (3%)
Query: 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
I D + IG+TP+V LN I +G RI AK+E P SV RI +MI DAE++G++
Sbjct: 3 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVACRIGANMIWDAEKRGVLK 59
Query: 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
PG L+E T+GNTGI +A AAA+GYKL L MP MS+E+R +L+A GA L+LT G
Sbjct: 60 PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 128 IDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
+ + EE++ P + QF NPANP+ H +TTGPEIWE T GQVD+F
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 187 XXXXXXXNFLK--KKNPEIKVYGVEPAESAIL 216
++K K ++ VEP +S ++
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
+ + IGNTP+V L + + + KLE P SV DR A SMI +AE++G I PG
Sbjct: 4 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGRIKPGD- 62
Query: 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
VLIE TSGNTGI +A AA KGY++ L+MP MS E+R ++AYGA+LIL E G++
Sbjct: 63 VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
+ E+ N+ QF NP NPK HY TTGPEIW+ T G++ F
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPKAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
F+++++ + + G++P E + + G
Sbjct: 182 VSEFMREQSKPVTIVGLQPEEGSSIPG 208
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 156 bits (395), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
+ + IGNTP+V L + + + KLE P SVKDR A SMI +AE++G I PG
Sbjct: 4 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD- 62
Query: 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
VLIE TSGNTGI +A AA KGY++ L+MP MS E+R ++AYGA+LIL E G++
Sbjct: 63 VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
+ E+ N+ QF NP NP HY TTGPEIW+ T G++ F
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
F+++++ + + G++P E + + G
Sbjct: 182 VSRFMREQSKPVTIVGLQPEEGSSIPG 208
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 156 bits (395), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
N + + IGNTP+V L I + I KLE P SVKDR A SMI +AE++G I PG
Sbjct: 2 NTLEQTIGNTPLVKLQRIGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 61
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
VLIE TSGNTGI +A AA KGY++ L+MP MS E+R ++AYGA+LIL E G+
Sbjct: 62 D-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGM- 119
Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXX 189
E R + +++ QF NP NP HY TTGPEIW T G++ F
Sbjct: 120 EGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGTI 179
Query: 190 XXXXNFLKKKNPEIKVYGVEPAESAILNG 218
FL+++ + + G++P E + + G
Sbjct: 180 TGVSRFLREQEKPVTIVGLQPEEGSSIPG 208
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 119/207 (57%), Gaps = 2/207 (0%)
Query: 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
+ + IGNTP+V L + + + KLE P SV DR A SMI +AE++G I PG
Sbjct: 4 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGEIKPGD- 62
Query: 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
VLIE TSGNTGI +A AA KGY++ L+MP MS E+R ++AYGA+LIL E G++
Sbjct: 63 VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
+ E+ N+ QF NP NP HY TTGPEIW+ T G++ F
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
F+++++ + + G++P E + + G
Sbjct: 182 VSRFMREQSKPVTIVGLQPEEGSSIPG 208
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 3 SEKCAIANDITELIGNTPMVYLNNI--VDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
+ + I +I E+IG TP+V LNNI DG + + AK E + P SVKDRI + M++DA
Sbjct: 45 AHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDA 104
Query: 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
EE+GL+ PG T+ IE TSGNTGIG+A A KGYK I+VMP MS EK L+ GA++I
Sbjct: 105 EEQGLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKII 163
Query: 121 LTNAEMGIDEE---FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVD 177
T E D + ++L + P S Q++N NP HY+ T EI +VD
Sbjct: 164 RTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD 223
Query: 178 IFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAI 215
+ +K++ P ++ GV+P S +
Sbjct: 224 MIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSIL 261
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 8 IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
I DI + IG+TPMV +N I G K + AK E SVKDRI+ MI+DAE G
Sbjct: 33 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 92
Query: 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
+ PG T+ IE TSGNTGIG+A AA +GY+ I+VMP MS EK +L+A GA+++ T
Sbjct: 93 LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 151
Query: 126 MGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
D + L N+IP S Q++N +NP HY+TT EI + G++D+
Sbjct: 152 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 211
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAIL 216
LK+K P ++ GV+P E +IL
Sbjct: 212 VGTGGTITGIARKLKEKCPGCRIIGVDP-EGSIL 244
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 8 IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
I DI + IG+TPMV +N I G K + AK E SVKDRI+ MI+DAE G
Sbjct: 98 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 157
Query: 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
+ PG T+ IE TSGNTGIG+A AA +GY+ I+VMP MS EK +L+A GA+++ T
Sbjct: 158 LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 216
Query: 126 MGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
D + L N+IP S Q++N +NP HY+TT EI + G++D+
Sbjct: 217 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 276
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAIL 216
LK+K P ++ GV+P E +IL
Sbjct: 277 VGTGGTITGIARKLKEKCPGCRIIGVDP-EGSIL 309
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 9/208 (4%)
Query: 10 NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
+ + + +GNTP+V L + DG R+ AKLE P S+KDR A MI+ AE
Sbjct: 7 DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEA 66
Query: 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
GL+ PG T+L E TSGNTGI +A A KGY+LI VMP S+E+R +L+ YGAQ+I +
Sbjct: 67 DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 125
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
AE G + +EL P+ +Q+ NPAN +HY TGPE+ ++ F
Sbjct: 126 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELL-ADLPEITHFVAG 184
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEP 210
FL++ +K+ EP
Sbjct: 185 LGTTGTLMGTGRFLREHVANVKIVAAEP 212
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 10 NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
+ + + +GNTP+V L + DG R+ AKLE P S+KDR A MI+ AE
Sbjct: 5 DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEA 64
Query: 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
GL+ PG T+L E TSGNTGI +A A KGY+LI VMP S+E+R +L+ YGAQ+I +
Sbjct: 65 DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 123
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI 168
AE G + +EL P+ +Q+ NPAN +HY TGPE+
Sbjct: 124 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL 169
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 110/208 (52%), Gaps = 9/208 (4%)
Query: 10 NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
+ + + +GNTP+V L + DG R+ AKLE P S+ DR A MI+ AE
Sbjct: 8 DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIXDRPAVRMIEQAEA 67
Query: 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
GL+ PG T+L E TSGNTGI +A A KGY+LI VMP S+E+R +L+ YGAQ+I +
Sbjct: 68 DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 126
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
AE G + +EL P+ +Q+ NPAN +HY TGPE+ ++ F
Sbjct: 127 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELL-ADLPEITHFVAG 185
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEP 210
FL++ +K+ EP
Sbjct: 186 LGTTGTLMGTGRFLREHVANVKIVAAEP 213
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 1 MGSEKCAIANDITELIGNTPMVYLNNIVDGCK----ARIAAKLEMMEPCSSVKDRIAFSM 56
+ S + I ++I E IG TP+V L+ + + + RI KLE P SSVKDR+ F++
Sbjct: 5 ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 64
Query: 57 IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116
+ A + G + PG + IE TSGNTGI + A GY++ + MP+ MS+E+++I++A+G
Sbjct: 65 VYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 123
Query: 117 AQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQ 175
A+LILT + G+ V +++ + P F +QF NP N H+ T EIWE T G+
Sbjct: 124 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGE 182
Query: 176 VDIFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNG 218
VDI LK+K IK+ VEP ESA+L G
Sbjct: 183 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 225
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 1 MGSEKCAIANDITELIGNTPMVYLNNIVDGCK----ARIAAKLEMMEPCSSVKDRIAFSM 56
+ S + I ++I E IG TP+V L+ + + + RI KLE P SSVKDR+ F++
Sbjct: 6 ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 65
Query: 57 IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116
+ A + G + PG + IE TSGNTGI + A GY++ + MP+ MS+E+++I++A+G
Sbjct: 66 VYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 124
Query: 117 AQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQ 175
A+LILT + G+ V +++ + P F +QF NP N H+ T EIWE T G+
Sbjct: 125 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGE 183
Query: 176 VDIFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNG 218
VDI LK+K IK+ VEP ESA+L G
Sbjct: 184 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 226
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 127/226 (56%), Gaps = 17/226 (7%)
Query: 1 MGSEKCAIAND--ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK 58
MGS+K + + LIG+TP+V L++I +RI KLE P SVKDR A MI
Sbjct: 1 MGSDKIHHHHHHMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMIL 56
Query: 59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ 118
DAE++GL+ G ++E TSGN GI +A A +G+++IL MP MS+E+R +L+ GA+
Sbjct: 57 DAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAE 113
Query: 119 LILTNAEMGIDEEFRIVEELLNKIPTSFNPH---QFKNPANPKTHYETTGPEIWEGTRGQ 175
L+LT E+G+ VE+ L +I H QF+NP N +H TTGPEI + Q
Sbjct: 114 LVLTPGELGMKGA---VEKAL-EISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQ 169
Query: 176 VDIFXXXXXXXXXXXXXXNFLKK-KNPEIKVYGVEPAESAILNGGK 220
+D F LK +K+ VEPA+S +L+GG+
Sbjct: 170 IDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQ 215
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 15/211 (7%)
Query: 14 ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVL 73
LIG+TP+V L++I +RI KLE P SVKDR A MI DAE++GL+ G +
Sbjct: 4 RLIGSTPIVRLDSI----DSRIXLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---I 56
Query: 74 IECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
+E TSGN GI +A A +G+++IL MP MS+E+R +L+ GA+L+LT E+G+
Sbjct: 57 VEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGA-- 114
Query: 134 IVEELLNKIPTSFNPH---QFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXX 190
VE+ L +I H QF+NP N +H TTGPEI + Q+D F
Sbjct: 115 -VEKAL-EISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTIS 172
Query: 191 XXXNFLKK-KNPEIKVYGVEPAESAILNGGK 220
LK +K+ VEPA+S +L+GG+
Sbjct: 173 GVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQ 203
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
AI D + IGNTP+V L + G + K+E P SV RI +M+ AE+ G +
Sbjct: 2 AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVXCRIGANMVWQAEKDGTL 59
Query: 67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
T GK + ++ TSGNTGI +A AAA+GYK+ L MP MSLE++ +L G L+LT
Sbjct: 60 TKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118
Query: 127 GIDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGT 172
G+ EE++ P+ + QF+NPANP+ H ETTGPEIW+ T
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDT 165
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|1WKV|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|3VSA|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
pdb|3VSA|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
Length = 389
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 34 RIAAKLEMMEPCS-SVKDRIAFSMIKDAE---EKGLITPGKTVLIECTSGNTGIGMACFA 89
R+ KLE P S SVKDR A +I EKG +++ + TS N G+ ++ A
Sbjct: 111 RVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKG------SLVADATSSNFGVALSAVA 164
Query: 90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILT-NAEMGIDEEFRIVEELLNKIPTSFNP 148
GY+ + +P +++ + GAQ+I+ A + R++++ N+ N
Sbjct: 165 RLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVN- 223
Query: 149 HQFKNPANPKTHYETTGPEIW-EGTRGQVDI--FXXXXXXXXXXXXXXNFLKKKNPEIKV 205
QF N AN + H T EI+ + RG + + +L+ +P I+
Sbjct: 224 -QFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRA 282
Query: 206 YGVEPAESAILNG 218
V+PA+ + G
Sbjct: 283 VLVQPAQGDSIPG 295
>pdb|1UIM|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Orthorhombic Crystal Form
pdb|1UIM|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Orthorhombic Crystal Form
pdb|1UIN|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Trigonal Crystal Form
pdb|1UIN|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Trigonal Crystal Form
pdb|1V7C|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|C Chain C, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|D Chain D, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|3AEX|A Chain A, Catalytic Intermediate Analogue Of Threonine Synthase From
Thermus Thermophilus Hb8
pdb|3AEX|B Chain B, Catalytic Intermediate Analogue Of Threonine Synthase From
Thermus Thermophilus Hb8
pdb|3AEY|A Chain A, Apo Form Of Threonine Synthase From Thermus Thermophilus
Hb8
pdb|3AEY|B Chain B, Apo Form Of Threonine Synthase From Thermus Thermophilus
Hb8
Length = 351
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKA--RIAAKLEMMEPCSSVKDRIAFSMIKDA 60
SEK + I+ L G+TP++ L + K R+ AK E + P S KDR + A
Sbjct: 16 SEKTPV---ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKA 72
Query: 61 EEKGLITPGKTVLIECTS-GNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQ 118
E G + C S GNT A +AA G I+V+PA +++L K +GA+
Sbjct: 73 VEGG------AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGAR 126
Query: 119 LILTNAEMGIDEEFRIVEELLNKIPT----SFNPHQFKN 153
++ E D+ R+ ++L P S NPH+ +
Sbjct: 127 IV--QVEGNFDDALRLTQKLTEAFPVALVNSVNPHRLEG 163
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSC|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSD|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
pdb|3VSD|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
Length = 389
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 34 RIAAKLEMMEPCS-SVKDRIAFSMIKDAE---EKGLITPGKTVLIECTSGNTGIGMACFA 89
R+ KLE P S SV DR A +I EKG +++ + TS N G+ ++ A
Sbjct: 111 RVWLKLEWYNPFSLSVADRPAVEIISRLSRRVEKG------SLVADATSSNFGVALSAVA 164
Query: 90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILT-NAEMGIDEEFRIVEELLNKIPTSFNP 148
GY+ + +P +++ + GAQ+I+ A + R++++ N+ N
Sbjct: 165 RLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVN- 223
Query: 149 HQFKNPANPKTHYETTGPEIW-EGTRGQVDI--FXXXXXXXXXXXXXXNFLKKKNPEIKV 205
QF N AN + H T EI+ + RG + + +L+ +P I+
Sbjct: 224 -QFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRA 282
Query: 206 YGVEPAESAILNG 218
V+PA+ + G
Sbjct: 283 VLVQPAQGDSIPG 295
>pdb|2ZSJ|A Chain A, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|B Chain B, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|C Chain C, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|D Chain D, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
Length = 352
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 12 ITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
+T GNTP++ +N+ G K +I K E + P S KDR I A E G
Sbjct: 24 VTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAG----- 78
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP----AFMSLEKRIILQAYGAQLILTNAE 125
K +I ++GNT A +AA G + +++P A L + +I YGA+++
Sbjct: 79 KRAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMI---YGAKVLAIQGT 135
Query: 126 MGIDEEFRIVEELLNKIPT----SFNPHQFK 152
D+ IV ++ P S NP++ +
Sbjct: 136 F--DDALNIVRKIGENFPVEIVNSVNPYRIE 164
>pdb|2D1F|A Chain A, Structure Of Mycobacterium Tuberculosis Threonine Synthase
pdb|2D1F|B Chain B, Structure Of Mycobacterium Tuberculosis Threonine Synthase
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
+T L G TP++ N+ I K+E + P S KDR + DA + G+
Sbjct: 32 VTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDA-----LAHGQR 86
Query: 72 VLIECTSGNTGIGMACFAAAKGYKLILVMP-AFMSLEKRIILQAYGAQLILTNAEMGIDE 130
++ ++GNT A +AA G +++P +++ K +GA++I ID
Sbjct: 87 AVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQ------IDG 140
Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANP 157
F EL K+ F N NP
Sbjct: 141 NFDDCLELARKMAADFPTISLVNSVNP 167
>pdb|1TDJ|A Chain A, Threonine Deaminase (Biosynthetic) From E. Coli
Length = 514
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTV-LIECT 77
TP+ + + I K E +P S K R A++M+ GL K +I +
Sbjct: 32 TPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMA-----GLTEEQKAHGVITAS 86
Query: 78 SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124
+GN G+A +A G K ++VMP + K ++ +G +++L A
Sbjct: 87 AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA 133
>pdb|1VE5|A Chain A, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|B Chain B, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|C Chain C, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|D Chain D, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
Length = 311
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 40 EMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILV 99
E ++ S K R A S K L L+ +SGN G+A A G K ++V
Sbjct: 42 EHLQKTGSFKARGALS-------KALALENPKGLLAVSSGNHAQGVAYAAQVLGVKALVV 94
Query: 100 MPAFMSLEKRIILQAYGAQLI 120
MP S K+ +AYGA+++
Sbjct: 95 MPEDASPYKKACARAYGAEVV 115
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL 119
+G + PG++VLI SG G A ++G + V S EKR LQA QL
Sbjct: 1662 RGRMQPGESVLIHSGSGGVGQAAIAIALSRGCR---VFTTVGSAEKRAYLQARFPQL 1715
>pdb|3L6B|A Chain A, X-Ray Crystal Structure Of Human Serine Racemase In
Complex Malonate A Potent Inhibitor
Length = 346
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 11 DITELIGNTPMVYLNNIVDGCKAR-IAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
+I + I TP V ++I++ R + K E+ + S K R A + ++ L
Sbjct: 18 NIRDSIHLTP-VLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKP 76
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
K V+ +SGN G + A +G +V+P K++ +QAYGA ++
Sbjct: 77 KAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIV 126
>pdb|3HMK|A Chain A, Crystal Structure Of Serine Racemase
pdb|3HMK|B Chain B, Crystal Structure Of Serine Racemase
pdb|3L6C|A Chain A, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
pdb|3L6C|B Chain B, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
Length = 339
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 38 KLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLI 97
K E+ + S K R A + I+ L K V+ +SGN G + A +G
Sbjct: 45 KCELFQKTGSFKIRGALNAIRGLIPDTLEGKPKAVVTH-SSGNHGQALTYAAKLEGIPAY 103
Query: 98 LVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEF--RIVEE 137
+V+P K++ +QAYGA ++ + E RI++E
Sbjct: 104 IVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRIIQE 145
>pdb|3L6R|A Chain A, The Structure Of Mammalian Serine Racemase: Evidence For
Conformational Changes Upon Inhibitor Binding
Length = 346
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 38 KLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLI 97
K E+ + S R A + ++ L K V+ +SGN G + A +G
Sbjct: 45 KCELFQKTGSFXIRGALNAVRSLVPDALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAY 103
Query: 98 LVMPAFMSLEKRIILQAYGAQLI 120
+V+P K++ +QAYGA ++
Sbjct: 104 IVVPQTAPDCKKLAIQAYGASIV 126
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 42 MEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF--AAAKGYKLILV 99
+ PC+ A+ M+ D E+ + PG +V+ + N+G+G A AAA G + I V
Sbjct: 150 VNPCT------AYRMLMDFEQ---LQPGDSVIQNAS--NSGVGQAVIQIAAALGLRTINV 198
Query: 100 M---PAFMSLEKRIILQAYGAQLILTNAEM 126
+ P L R L++ GA+ ++T E+
Sbjct: 199 VRDRPDIQKLSDR--LKSLGAEHVITEEEL 226
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 42 MEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF--AAAKGYKLILV 99
+ PC+ A+ M+ D E+ + PG +V+ + N+G+G A AAA G + I V
Sbjct: 137 VNPCT------AYRMLMDFEQ---LQPGDSVIQNAS--NSGVGQAVIQIAAALGLRTINV 185
Query: 100 M---PAFMSLEKRIILQAYGAQLILTNAEM 126
+ P L R L++ GA+ ++T E+
Sbjct: 186 VRDRPDIQKLSDR--LKSLGAEHVITEEEL 213
>pdb|2GN0|A Chain A, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 1.7 A
Resolution (Triclinic Form With One Complete Subunit
Built In Alternate Conformation)
pdb|2GN0|B Chain B, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 1.7 A
Resolution (Triclinic Form With One Complete Subunit
Built In Alternate Conformation)
pdb|2GN0|C Chain C, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 1.7 A
Resolution (Triclinic Form With One Complete Subunit
Built In Alternate Conformation)
pdb|2GN0|D Chain D, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 1.7 A
Resolution (Triclinic Form With One Complete Subunit
Built In Alternate Conformation)
pdb|2GN1|A Chain A, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 2.2a
Resolution (Triclinic Form With One Dimer Of Tdcb In The
Asymmetric Unit)
pdb|2GN1|B Chain B, Crystal Structure Of Dimeric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium At 2.2a
Resolution (Triclinic Form With One Dimer Of Tdcb In The
Asymmetric Unit)
pdb|2GN2|A Chain A, Crystal Structure Of Tetrameric Biodegradative Threonine
Deaminase (Tdcb) From Salmonella Typhimurium In Complex
With Cmp At 2.5a Resolution (Hexagonal Form)
Length = 342
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 16 IGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE 75
I T M N + CK I K E M+ S R AF+ + E + ++
Sbjct: 38 IYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFXIRGAFNKLSSLTE----AEKRKGVVA 93
Query: 76 CTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
C++GN G++ A G +VMP K Y A+++L
Sbjct: 94 CSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVL 139
>pdb|4D9K|A Chain A, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|D Chain D, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|B Chain B, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|C Chain C, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
Length = 398
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
K T GN G G+A A G ++ MP + E+ + GA+ I+T +M D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT--DMNYD 169
Query: 130 EEFRI 134
+ R+
Sbjct: 170 DTVRL 174
>pdb|4D9M|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
pdb|4D9M|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
Length = 398
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
K T GN G G+A A G ++ MP + E+ + GA+ I+T +M D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT--DMNYD 169
Query: 130 EEFRI 134
+ R+
Sbjct: 170 DTVRL 174
>pdb|4D9I|A Chain A, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9I|B Chain B, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9N|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
pdb|4D9N|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
Length = 398
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
K T GN G G+A A G ++ MP + E+ + GA+ I+T +M D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT--DMNYD 169
Query: 130 EEFRI 134
+ R+
Sbjct: 170 DTVRL 174
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAK 92
E G ++PG+ VLI +G G+GMA + AK
Sbjct: 32 EVGRLSPGERVLIHSATG--GVGMAAVSIAK 60
>pdb|1V71|A Chain A, Crystal Structure Of S.pombe Serine Racemase
pdb|1WTC|A Chain A, Crystal Structure Of S.ponbe Serine Racemase Complex With
Amppcp
pdb|2ZPU|A Chain A, Crystal Structure Of Modified Serine Racemase From
S.Pombe.
pdb|2ZR8|A Chain A, Crystal Structure Of Modified Serine Racemase Complexed
With Serine
Length = 323
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 74/204 (36%), Gaps = 19/204 (9%)
Query: 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
I + TP++ + + A + K E + + K R A + + E K
Sbjct: 20 IKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNE----AQRKA 75
Query: 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
++ +SGN +A A G ++MP K + YG Q+I+ + D+
Sbjct: 76 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYK--DDR 133
Query: 132 FRIVEEL-----LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
++ +E+ L IP +PH T E++E G +D
Sbjct: 134 EKMAKEISEREGLTIIPPYDHPHVLAGQG-------TAAKELFEEV-GPLDALFVCLGGG 185
Query: 187 XXXXXXXNFLKKKNPEIKVYGVEP 210
+ P +VYGVEP
Sbjct: 186 GLLSGSALAARHFAPNCEVYGVEP 209
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
+ G++VL+ SG G+G+A A+ Y L ++ A ++I+LQ GA + + E
Sbjct: 168 VKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEVFNHRE 224
Query: 126 M 126
+
Sbjct: 225 V 225
>pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase
Mechanism
pdb|1AMJ|A Chain A, Steric And Conformational Features Of The Aconitase
Mechanism
Length = 754
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 439 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 468
>pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And
Nitrocitrate Bound
pdb|1NIT|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And
Nitrocitrate Bound
Length = 754
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 439 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 468
>pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound
pdb|1FGH|A Chain A, Complex With 4-Hydroxy-Trans-Aconitate
pdb|8ACN|A Chain A, Crystal Structures Of Aconitase With Isocitrate And
Nitroisocitrate Bound
Length = 754
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 439 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 468
>pdb|4DEV|A Chain A, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|B Chain B, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|C Chain C, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|D Chain D, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|E Chain E, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|F Chain F, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|G Chain G, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|4DEV|H Chain H, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus
Length = 408
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 123 NAEMGIDEEFR--------IVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG 174
N E+G EE+ I+ L TSFN +F NP + KT+ T +GTR
Sbjct: 251 NEELGAQEEYDFASWQPDAIIVNLGTNDVTSFNQPEFLNPDDGKTYKMRTNT---DGTRN 307
Query: 175 QVD 177
+ D
Sbjct: 308 RED 310
>pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The
(4fe-4s) Cluster In The Crystal
pdb|6ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The
(4fe-4s) Cluster In The Crystal
pdb|7ACN|A Chain A, Crystal Structures Of Aconitase With Isocitrate And
Nitroisocitrate Bound
Length = 754
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 439 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 468
>pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase
pdb|1B0K|A Chain A, S642a:fluorocitrate Complex Of Aconitase
Length = 753
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 438 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 467
>pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate
Length = 754
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 439 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 468
>pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase
Length = 753
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 438 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 467
>pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex
Length = 753
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 140 NKIPTSFNPH-QFKNPANPKTHYETTGPEI 168
N I TS+N + +N ANP+TH T PEI
Sbjct: 438 NTIVTSYNRNFTGRNDANPETHAFVTSPEI 467
>pdb|3U37|A Chain A, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|B Chain B, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|C Chain C, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|D Chain D, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|E Chain E, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|F Chain F, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|G Chain G, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus.
pdb|3U37|H Chain H, An Acetyl Xylan Esterase (est2a) From The Rumen Bacterium
Butyrivibrio Proteoclasticus
Length = 408
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 123 NAEMGIDEEFR--------IVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG 174
N E+G EE+ I+ L TSFN +F NP + KT+ T +GTR
Sbjct: 251 NEELGAQEEYDFASWQPDAIIVNLGTNDVTSFNQPEFLNPDDGKTYKMRTNT---DGTRN 307
Query: 175 QVD 177
+ D
Sbjct: 308 RED 310
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,276,205
Number of Sequences: 62578
Number of extensions: 228573
Number of successful extensions: 711
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 601
Number of HSP's gapped (non-prelim): 72
length of query: 221
length of database: 14,973,337
effective HSP length: 95
effective length of query: 126
effective length of database: 9,028,427
effective search space: 1137581802
effective search space used: 1137581802
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)