Query 043209
Match_columns 221
No_of_seqs 142 out of 1217
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:52:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 7.3E-56 2.5E-60 382.2 23.7 216 6-221 23-238 (344)
2 3tbh_A O-acetyl serine sulfhyd 100.0 8.3E-54 2.9E-58 368.1 25.3 217 3-220 6-222 (334)
3 4aec_A Cysteine synthase, mito 100.0 5.3E-54 1.8E-58 378.3 23.7 217 4-220 109-325 (430)
4 1z7w_A Cysteine synthase; tran 100.0 1.7E-53 5.7E-58 364.7 24.5 212 8-219 5-216 (322)
5 3dwg_A Cysteine synthase B; su 100.0 9.9E-53 3.4E-57 360.2 24.7 209 6-216 3-218 (325)
6 2v03_A Cysteine synthase B; py 100.0 4.5E-52 1.5E-56 353.0 26.1 206 10-217 2-207 (303)
7 2q3b_A Cysteine synthase A; py 100.0 6.4E-52 2.2E-56 353.5 25.7 212 7-219 5-216 (313)
8 2pqm_A Cysteine synthase; OASS 100.0 6E-52 2E-56 357.8 22.7 216 2-219 7-227 (343)
9 1y7l_A O-acetylserine sulfhydr 100.0 6E-52 2.1E-56 354.1 22.3 207 8-217 3-211 (316)
10 1ve1_A O-acetylserine sulfhydr 100.0 2E-51 6.9E-56 349.1 24.4 207 12-219 3-210 (304)
11 2egu_A Cysteine synthase; O-ac 100.0 5.8E-52 2E-56 353.0 21.1 210 8-219 4-213 (308)
12 1o58_A O-acetylserine sulfhydr 100.0 2.2E-50 7.5E-55 342.6 21.0 200 12-219 14-214 (303)
13 3l6b_A Serine racemase; pyrido 100.0 7.6E-51 2.6E-55 351.3 17.0 208 3-216 10-217 (346)
14 1jbq_A B, cystathionine beta-s 100.0 2.2E-49 7.5E-54 350.3 24.0 209 7-216 97-310 (435)
15 4h27_A L-serine dehydratase/L- 100.0 1.4E-49 4.7E-54 345.4 20.0 200 10-217 38-238 (364)
16 3pc3_A CG1753, isoform A; CBS, 100.0 6.3E-49 2.1E-53 356.2 24.4 211 5-216 47-262 (527)
17 2gn0_A Threonine dehydratase c 100.0 2.2E-50 7.4E-55 348.0 13.9 205 3-217 25-230 (342)
18 1v71_A Serine racemase, hypoth 100.0 3E-50 1E-54 344.6 12.3 204 3-216 11-215 (323)
19 1ve5_A Threonine deaminase; ri 100.0 4.7E-50 1.6E-54 341.6 13.2 203 3-216 5-210 (311)
20 1p5j_A L-serine dehydratase; l 100.0 3.6E-49 1.2E-53 343.6 18.8 202 8-217 36-238 (372)
21 2rkb_A Serine dehydratase-like 100.0 7.9E-49 2.7E-53 335.1 19.8 194 14-216 3-197 (318)
22 3aey_A Threonine synthase; PLP 100.0 2.8E-48 9.5E-53 335.9 18.1 199 9-217 19-226 (351)
23 2d1f_A Threonine synthase; ami 100.0 2E-48 6.8E-53 337.8 17.0 201 9-218 29-236 (360)
24 2zsj_A Threonine synthase; PLP 100.0 3.3E-48 1.1E-52 335.6 17.6 199 9-217 21-228 (352)
25 1tdj_A Biosynthetic threonine 100.0 2.5E-48 8.5E-53 348.4 15.9 198 11-217 24-221 (514)
26 3iau_A Threonine deaminase; py 100.0 3.8E-48 1.3E-52 336.7 13.7 198 11-217 53-250 (366)
27 1j0a_A 1-aminocyclopropane-1-c 100.0 3.9E-47 1.3E-51 325.5 19.3 205 7-217 10-223 (325)
28 1f2d_A 1-aminocyclopropane-1-c 100.0 2.1E-47 7.3E-52 329.1 15.9 205 7-217 4-234 (341)
29 4d9b_A D-cysteine desulfhydras 100.0 2.1E-46 7.3E-51 323.0 19.7 207 5-217 19-241 (342)
30 3ss7_X D-serine dehydratase; t 100.0 4.5E-46 1.5E-50 330.6 20.5 201 13-216 73-312 (442)
31 1wkv_A Cysteine synthase; homo 100.0 1.9E-45 6.6E-50 321.2 21.3 196 17-218 95-295 (389)
32 4d9i_A Diaminopropionate ammon 100.0 6.9E-46 2.4E-50 325.7 17.8 201 14-217 40-267 (398)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 1.6E-45 5.6E-50 316.9 15.9 202 7-217 4-231 (338)
34 1e5x_A Threonine synthase; thr 100.0 8E-43 2.7E-47 312.8 18.5 198 12-217 124-334 (486)
35 1x1q_A Tryptophan synthase bet 100.0 9.5E-43 3.3E-47 307.5 18.0 197 14-214 72-285 (418)
36 1v8z_A Tryptophan synthase bet 100.0 3.4E-42 1.1E-46 301.4 20.5 198 12-214 43-256 (388)
37 1qop_B Tryptophan synthase bet 100.0 2.7E-42 9.2E-47 302.8 17.6 196 13-214 49-260 (396)
38 2o2e_A Tryptophan synthase bet 100.0 3.3E-41 1.1E-45 297.7 18.4 196 13-213 75-286 (422)
39 1vb3_A Threonine synthase; PLP 100.0 1.4E-35 4.7E-40 262.4 16.8 179 17-212 82-276 (428)
40 1kl7_A Threonine synthase; thr 100.0 3.7E-33 1.3E-37 250.7 19.0 190 15-216 93-308 (514)
41 4f4f_A Threonine synthase; str 100.0 4.8E-33 1.7E-37 247.3 17.4 182 18-216 93-291 (468)
42 3v7n_A Threonine synthase; ssg 100.0 6.5E-32 2.2E-36 240.4 20.0 186 19-216 103-305 (487)
43 3fwz_A Inner membrane protein 94.9 0.69 2.4E-05 33.3 12.5 50 72-124 9-58 (140)
44 1vp8_A Hypothetical protein AF 93.5 0.94 3.2E-05 35.0 10.3 76 43-124 22-106 (201)
45 3jyn_A Quinone oxidoreductase; 92.9 1 3.6E-05 37.1 10.8 60 62-124 134-193 (325)
46 3qwb_A Probable quinone oxidor 92.6 1.5 5.1E-05 36.3 11.4 59 62-123 142-200 (334)
47 3krt_A Crotonyl COA reductase; 92.6 0.83 2.8E-05 39.8 10.2 57 64-123 224-280 (456)
48 4a2c_A Galactitol-1-phosphate 92.3 1.1 3.9E-05 37.1 10.4 63 60-125 152-214 (346)
49 4fn4_A Short chain dehydrogena 92.2 2.6 8.8E-05 33.9 11.9 74 69-142 7-82 (254)
50 4b7c_A Probable oxidoreductase 92.1 1.8 6.3E-05 35.7 11.4 58 62-122 143-201 (336)
51 4dup_A Quinone oxidoreductase; 92.0 1.7 5.8E-05 36.3 11.1 60 62-124 161-220 (353)
52 3s2e_A Zinc-containing alcohol 92.0 2.1 7.1E-05 35.5 11.6 62 59-124 157-218 (340)
53 4g81_D Putative hexonate dehyd 91.9 3.2 0.00011 33.4 12.2 74 69-142 9-84 (255)
54 1kol_A Formaldehyde dehydrogen 91.7 2 6.9E-05 36.5 11.4 58 61-121 178-235 (398)
55 3gqv_A Enoyl reductase; medium 91.2 0.92 3.1E-05 38.3 8.7 52 67-122 163-214 (371)
56 3tqh_A Quinone oxidoreductase; 91.2 1.8 6.2E-05 35.5 10.4 59 60-122 144-202 (321)
57 3uog_A Alcohol dehydrogenase; 91.1 2.6 8.9E-05 35.3 11.4 57 62-122 183-239 (363)
58 3gaz_A Alcohol dehydrogenase s 90.9 2.4 8.4E-05 35.2 11.0 54 62-119 144-197 (343)
59 2c0c_A Zinc binding alcohol de 90.9 2.5 8.6E-05 35.4 11.1 58 62-122 157-214 (362)
60 3e03_A Short chain dehydrogena 90.8 5.3 0.00018 31.9 12.7 56 69-124 6-69 (274)
61 3pi7_A NADH oxidoreductase; gr 90.7 1.4 4.7E-05 36.8 9.3 65 53-124 153-217 (349)
62 4ej6_A Putative zinc-binding d 90.6 2 7E-05 36.2 10.3 59 61-122 175-233 (370)
63 4eye_A Probable oxidoreductase 90.6 1.7 5.9E-05 36.1 9.7 58 62-122 153-210 (342)
64 3zu3_A Putative reductase YPO4 90.5 4.3 0.00015 35.0 12.2 101 40-142 19-135 (405)
65 3iup_A Putative NADPH:quinone 90.4 1.7 5.7E-05 36.8 9.6 63 53-123 160-223 (379)
66 3fpc_A NADP-dependent alcohol 90.1 2 7E-05 35.7 9.8 60 60-122 158-217 (352)
67 3gms_A Putative NADPH:quinone 90.0 1.9 6.4E-05 35.8 9.5 60 61-123 137-196 (340)
68 3qiv_A Short-chain dehydrogena 89.9 3.9 0.00013 32.0 10.9 55 69-123 9-64 (253)
69 3kvo_A Hydroxysteroid dehydrog 89.9 6.4 0.00022 32.9 12.7 55 69-123 45-107 (346)
70 3r1i_A Short-chain type dehydr 89.8 3.9 0.00013 32.8 11.0 54 70-123 33-87 (276)
71 3c85_A Putative glutathione-re 89.8 4.8 0.00016 29.9 12.3 49 73-124 42-91 (183)
72 3l9w_A Glutathione-regulated p 89.6 5.4 0.00019 34.3 12.3 50 72-124 6-55 (413)
73 3nrc_A Enoyl-[acyl-carrier-pro 89.6 4 0.00014 32.7 10.9 46 70-116 27-74 (280)
74 3o74_A Fructose transport syst 89.5 6.2 0.00021 30.7 17.2 48 163-212 168-218 (272)
75 3qk7_A Transcriptional regulat 89.5 6.8 0.00023 31.2 16.9 47 163-212 176-226 (294)
76 1zsy_A Mitochondrial 2-enoyl t 89.5 1.9 6.6E-05 36.0 9.2 60 62-121 161-221 (357)
77 4ibo_A Gluconate dehydrogenase 89.4 7.1 0.00024 31.2 12.2 54 70-123 27-81 (271)
78 4e3z_A Putative oxidoreductase 89.2 5 0.00017 31.9 11.2 55 70-124 27-83 (272)
79 3rkr_A Short chain oxidoreduct 89.1 4 0.00014 32.3 10.5 54 70-123 30-84 (262)
80 2j8z_A Quinone oxidoreductase; 89.1 4.4 0.00015 33.8 11.1 57 62-121 156-212 (354)
81 4gkb_A 3-oxoacyl-[acyl-carrier 89.0 2.5 8.6E-05 34.0 9.2 74 69-142 7-81 (258)
82 1v3u_A Leukotriene B4 12- hydr 88.9 5.6 0.00019 32.6 11.5 57 62-121 139-195 (333)
83 3ip1_A Alcohol dehydrogenase, 88.7 2.6 8.8E-05 35.9 9.5 57 64-123 209-265 (404)
84 3afn_B Carbonyl reductase; alp 88.6 7.1 0.00024 30.3 11.5 55 70-124 8-64 (258)
85 3tjr_A Short chain dehydrogena 88.6 4 0.00014 33.1 10.3 53 70-122 32-85 (301)
86 1pqw_A Polyketide synthase; ro 88.6 4.2 0.00014 30.6 9.8 57 62-121 32-88 (198)
87 3awd_A GOX2181, putative polyo 88.6 4.6 0.00016 31.5 10.4 53 70-122 14-67 (260)
88 3sc4_A Short chain dehydrogena 88.5 7.1 0.00024 31.3 11.7 55 69-123 9-71 (285)
89 1f8f_A Benzyl alcohol dehydrog 88.5 4.2 0.00014 34.0 10.7 59 62-123 184-242 (371)
90 2eih_A Alcohol dehydrogenase; 88.5 4.9 0.00017 33.3 10.9 55 64-121 162-216 (343)
91 3fbg_A Putative arginate lyase 88.5 4.1 0.00014 33.8 10.5 52 68-122 150-201 (346)
92 1yb5_A Quinone oxidoreductase; 88.4 6.6 0.00023 32.7 11.8 57 62-121 164-220 (351)
93 3oid_A Enoyl-[acyl-carrier-pro 88.3 5 0.00017 31.7 10.5 55 69-123 4-60 (258)
94 3ucx_A Short chain dehydrogena 88.3 4.9 0.00017 31.8 10.5 55 69-123 11-66 (264)
95 1gu7_A Enoyl-[acyl-carrier-pro 88.3 3.1 0.00011 34.7 9.7 58 64-121 162-221 (364)
96 1jvb_A NAD(H)-dependent alcoho 88.3 5.9 0.0002 32.8 11.3 58 62-122 164-222 (347)
97 3gaf_A 7-alpha-hydroxysteroid 88.2 4.1 0.00014 32.2 9.9 55 69-123 12-67 (256)
98 1yb1_A 17-beta-hydroxysteroid 88.1 5 0.00017 31.9 10.5 54 70-123 32-86 (272)
99 1wly_A CAAR, 2-haloacrylate re 88.1 5.1 0.00018 32.9 10.8 56 63-121 140-195 (333)
100 3tfo_A Putative 3-oxoacyl-(acy 88.1 5.2 0.00018 31.9 10.5 55 69-123 4-59 (264)
101 1qor_A Quinone oxidoreductase; 88.1 5.7 0.0002 32.5 11.0 56 63-121 135-190 (327)
102 3lyl_A 3-oxoacyl-(acyl-carrier 87.9 4.7 0.00016 31.4 10.0 54 70-123 6-60 (247)
103 1g0o_A Trihydroxynaphthalene r 87.9 5.4 0.00018 31.9 10.6 54 70-123 30-85 (283)
104 2ew8_A (S)-1-phenylethanol deh 87.9 8.3 0.00028 30.1 11.7 53 70-123 8-60 (249)
105 3grk_A Enoyl-(acyl-carrier-pro 87.9 3.5 0.00012 33.4 9.5 32 70-101 32-65 (293)
106 3v2g_A 3-oxoacyl-[acyl-carrier 87.8 6.9 0.00023 31.2 11.1 55 69-123 31-87 (271)
107 3sju_A Keto reductase; short-c 87.8 4.4 0.00015 32.5 10.0 54 70-123 25-79 (279)
108 3hcw_A Maltose operon transcri 87.8 9.1 0.00031 30.4 17.1 47 163-211 178-230 (295)
109 1t57_A Conserved protein MTH16 87.7 3.2 0.00011 32.1 8.3 75 43-124 30-113 (206)
110 4dmm_A 3-oxoacyl-[acyl-carrier 87.7 5.7 0.0002 31.6 10.5 54 70-123 29-84 (269)
111 3ijr_A Oxidoreductase, short c 87.7 5.8 0.0002 32.0 10.7 54 70-123 48-103 (291)
112 3i1j_A Oxidoreductase, short c 87.7 8.3 0.00028 29.9 11.7 32 69-100 14-45 (247)
113 4a0s_A Octenoyl-COA reductase/ 87.7 1.4 4.7E-05 38.2 7.2 55 64-121 216-270 (447)
114 1h2b_A Alcohol dehydrogenase; 87.4 7.3 0.00025 32.5 11.4 55 64-122 182-237 (359)
115 4da9_A Short-chain dehydrogena 87.4 3.4 0.00012 33.2 9.1 54 70-123 30-85 (280)
116 2jah_A Clavulanic acid dehydro 87.4 6.2 0.00021 30.9 10.4 32 70-101 8-39 (247)
117 4iin_A 3-ketoacyl-acyl carrier 87.3 6.1 0.00021 31.4 10.5 55 69-123 29-85 (271)
118 1e3j_A NADP(H)-dependent ketos 87.3 5.5 0.00019 33.1 10.5 56 62-121 162-217 (352)
119 1sby_A Alcohol dehydrogenase; 87.2 9.1 0.00031 29.9 11.9 52 70-122 6-60 (254)
120 3s55_A Putative short-chain de 87.2 4.6 0.00016 32.2 9.7 33 69-101 10-42 (281)
121 3qlj_A Short chain dehydrogena 87.1 6.1 0.00021 32.3 10.6 55 70-124 28-93 (322)
122 3a28_C L-2.3-butanediol dehydr 87.0 6 0.0002 31.1 10.2 32 70-101 3-34 (258)
123 3goh_A Alcohol dehydrogenase, 86.9 1.5 5E-05 36.0 6.7 58 59-121 133-190 (315)
124 3is3_A 17BETA-hydroxysteroid d 86.9 6.4 0.00022 31.3 10.4 73 69-141 18-93 (270)
125 1iy8_A Levodione reductase; ox 86.9 7.5 0.00026 30.7 10.8 31 70-100 14-44 (267)
126 3v8b_A Putative dehydrogenase, 86.7 4.9 0.00017 32.4 9.7 32 70-101 29-60 (283)
127 2rhc_B Actinorhodin polyketide 86.7 6.5 0.00022 31.4 10.4 53 70-122 23-76 (277)
128 3imf_A Short chain dehydrogena 86.7 3.4 0.00012 32.6 8.6 55 69-123 6-61 (257)
129 2hcy_A Alcohol dehydrogenase 1 86.6 7.6 0.00026 32.1 11.1 59 60-121 161-219 (347)
130 3osu_A 3-oxoacyl-[acyl-carrier 86.6 7.4 0.00025 30.4 10.5 55 69-123 4-60 (246)
131 2zb4_A Prostaglandin reductase 86.6 8.8 0.0003 31.8 11.5 57 62-121 152-212 (357)
132 4iiu_A 3-oxoacyl-[acyl-carrier 86.5 7.2 0.00025 30.8 10.5 54 70-123 27-82 (267)
133 1fmc_A 7 alpha-hydroxysteroid 86.5 5.2 0.00018 31.1 9.5 32 70-101 12-43 (255)
134 3t7c_A Carveol dehydrogenase; 86.4 7 0.00024 31.6 10.5 32 70-101 29-60 (299)
135 3o26_A Salutaridine reductase; 86.3 8.3 0.00028 30.8 10.9 31 70-100 13-43 (311)
136 1zem_A Xylitol dehydrogenase; 86.0 6.7 0.00023 30.9 10.1 32 69-100 7-38 (262)
137 2d8a_A PH0655, probable L-thre 86.0 6.7 0.00023 32.4 10.4 57 60-121 160-217 (348)
138 1geg_A Acetoin reductase; SDR 85.9 8 0.00027 30.3 10.4 32 70-101 3-34 (256)
139 1vj0_A Alcohol dehydrogenase, 85.8 5.1 0.00018 33.7 9.7 58 60-121 186-245 (380)
140 2uvd_A 3-oxoacyl-(acyl-carrier 85.8 6.8 0.00023 30.5 9.9 32 70-101 5-36 (246)
141 3l6u_A ABC-type sugar transpor 85.7 12 0.00039 29.5 16.1 46 163-211 184-230 (293)
142 3sx2_A Putative 3-ketoacyl-(ac 85.6 6.1 0.00021 31.4 9.6 32 69-100 13-44 (278)
143 1vl8_A Gluconate 5-dehydrogena 85.5 7.8 0.00027 30.7 10.2 33 69-101 21-53 (267)
144 3uf0_A Short-chain dehydrogena 85.4 5.7 0.00019 31.8 9.3 56 69-124 31-86 (273)
145 2j3h_A NADP-dependent oxidored 85.2 9.7 0.00033 31.3 11.0 57 62-121 149-206 (345)
146 3rih_A Short chain dehydrogena 85.2 7.5 0.00026 31.5 10.1 53 70-122 42-96 (293)
147 2vn8_A Reticulon-4-interacting 85.1 3.5 0.00012 34.6 8.3 54 66-123 181-234 (375)
148 3pgx_A Carveol dehydrogenase; 85.0 6.4 0.00022 31.4 9.5 33 69-101 15-47 (280)
149 3svt_A Short-chain type dehydr 84.9 9.6 0.00033 30.3 10.6 54 69-122 11-68 (281)
150 3uko_A Alcohol dehydrogenase c 84.9 3.5 0.00012 34.7 8.2 58 61-121 186-243 (378)
151 3uve_A Carveol dehydrogenase ( 84.8 6.4 0.00022 31.4 9.5 32 69-100 11-42 (286)
152 3cxt_A Dehydrogenase with diff 84.8 7.4 0.00025 31.4 9.9 32 70-101 35-66 (291)
153 3tpf_A Otcase, ornithine carba 84.7 5.6 0.00019 33.0 9.0 64 61-124 138-207 (307)
154 3h7a_A Short chain dehydrogena 84.7 9.4 0.00032 30.0 10.3 72 70-141 8-81 (252)
155 3ftp_A 3-oxoacyl-[acyl-carrier 84.6 5.7 0.0002 31.7 9.0 32 70-101 29-60 (270)
156 2q2v_A Beta-D-hydroxybutyrate 84.6 8.6 0.0003 30.1 10.0 71 70-141 5-76 (255)
157 3pk0_A Short-chain dehydrogena 84.5 6.8 0.00023 31.0 9.4 32 69-100 10-41 (262)
158 3two_A Mannitol dehydrogenase; 84.4 3.7 0.00013 34.0 8.1 57 61-121 169-225 (348)
159 1xg5_A ARPG836; short chain de 84.4 12 0.00041 29.6 10.9 32 70-101 33-64 (279)
160 3r3s_A Oxidoreductase; structu 84.3 8.3 0.00028 31.1 10.0 55 70-124 50-107 (294)
161 2c07_A 3-oxoacyl-(acyl-carrier 84.2 4.9 0.00017 32.2 8.5 54 70-123 45-99 (285)
162 3gk3_A Acetoacetyl-COA reducta 84.1 7.1 0.00024 30.9 9.4 31 70-100 26-56 (269)
163 3ged_A Short-chain dehydrogena 84.0 14 0.00047 29.4 10.9 70 70-142 3-73 (247)
164 3tsc_A Putative oxidoreductase 84.0 8.5 0.00029 30.6 9.8 33 69-101 11-43 (277)
165 3pxx_A Carveol dehydrogenase; 83.9 7.9 0.00027 30.7 9.6 33 69-101 10-42 (287)
166 1rjw_A ADH-HT, alcohol dehydro 83.9 9.6 0.00033 31.4 10.4 53 65-121 161-213 (339)
167 3rwb_A TPLDH, pyridoxal 4-dehy 83.9 14 0.00046 28.9 10.9 52 69-123 6-58 (247)
168 3ai3_A NADPH-sorbose reductase 83.8 10 0.00035 29.7 10.2 33 69-101 7-39 (263)
169 3tox_A Short chain dehydrogena 83.8 5.4 0.00018 32.1 8.6 31 69-99 8-38 (280)
170 3l77_A Short-chain alcohol deh 83.7 5.9 0.0002 30.5 8.5 32 70-101 3-34 (235)
171 2dph_A Formaldehyde dismutase; 83.6 11 0.00039 31.7 10.9 56 61-120 178-234 (398)
172 3k31_A Enoyl-(acyl-carrier-pro 83.6 9.4 0.00032 30.8 10.0 33 70-102 31-65 (296)
173 2cdc_A Glucose dehydrogenase g 83.6 6 0.00021 33.0 9.1 51 69-120 181-231 (366)
174 3oec_A Carveol dehydrogenase ( 83.5 7.2 0.00024 31.9 9.4 31 70-100 47-77 (317)
175 2b5w_A Glucose dehydrogenase; 83.2 4.6 0.00016 33.6 8.2 50 70-120 174-226 (357)
176 3gem_A Short chain dehydrogena 83.1 8.8 0.0003 30.4 9.5 70 70-142 28-97 (260)
177 1x1t_A D(-)-3-hydroxybutyrate 83.0 12 0.00042 29.3 10.3 32 69-100 4-35 (260)
178 1xa0_A Putative NADPH dependen 82.9 3 0.0001 34.3 6.8 57 62-121 142-199 (328)
179 1yxm_A Pecra, peroxisomal tran 82.7 13 0.00043 29.8 10.5 32 70-101 19-50 (303)
180 1p0f_A NADP-dependent alcohol 82.6 5.6 0.00019 33.3 8.5 57 62-121 185-241 (373)
181 1iz0_A Quinone oxidoreductase; 82.6 3.3 0.00011 33.6 6.8 54 63-120 121-174 (302)
182 1w6u_A 2,4-dienoyl-COA reducta 82.5 11 0.00039 30.0 10.1 32 70-101 27-58 (302)
183 3gdg_A Probable NADP-dependent 82.4 13 0.00044 29.1 10.3 54 70-123 21-79 (267)
184 3ek2_A Enoyl-(acyl-carrier-pro 82.4 7.8 0.00027 30.4 8.9 73 69-142 14-90 (271)
185 3grp_A 3-oxoacyl-(acyl carrier 82.4 16 0.00055 28.9 10.8 51 70-123 28-79 (266)
186 1tt7_A YHFP; alcohol dehydroge 81.8 3.2 0.00011 34.1 6.5 56 63-121 144-200 (330)
187 1e3i_A Alcohol dehydrogenase, 81.7 6.8 0.00023 32.8 8.7 57 62-121 189-245 (376)
188 2jhf_A Alcohol dehydrogenase E 81.6 7.1 0.00024 32.7 8.8 57 62-121 185-241 (374)
189 3s8m_A Enoyl-ACP reductase; ro 81.5 13 0.00044 32.2 10.4 100 41-142 34-149 (422)
190 1pl8_A Human sorbitol dehydrog 81.1 7.4 0.00025 32.3 8.7 57 61-121 164-221 (356)
191 1cdo_A Alcohol dehydrogenase; 81.1 7.9 0.00027 32.4 8.9 57 62-121 186-242 (374)
192 4eez_A Alcohol dehydrogenase 1 81.1 16 0.00053 30.0 10.6 61 61-125 156-217 (348)
193 1mxh_A Pteridine reductase 2; 81.1 14 0.00047 29.2 10.0 32 70-101 12-43 (276)
194 3nx4_A Putative oxidoreductase 81.0 4.5 0.00015 33.1 7.2 53 66-121 143-196 (324)
195 3oig_A Enoyl-[acyl-carrier-pro 80.7 16 0.00056 28.5 10.3 72 69-141 7-84 (266)
196 2bd0_A Sepiapterin reductase; 80.5 14 0.00049 28.3 9.8 25 70-94 3-27 (244)
197 1xkq_A Short-chain reductase f 80.5 11 0.00038 29.9 9.3 31 70-100 7-37 (280)
198 4ekn_B Aspartate carbamoyltran 80.4 9.2 0.00031 31.6 8.8 61 61-123 144-210 (306)
199 2cfc_A 2-(R)-hydroxypropyl-COM 80.4 9.2 0.00032 29.6 8.6 32 70-101 3-34 (250)
200 1xhl_A Short-chain dehydrogena 80.3 12 0.00043 30.1 9.6 32 70-101 27-58 (297)
201 1c1d_A L-phenylalanine dehydro 80.1 14 0.00048 31.2 10.0 66 51-120 155-222 (355)
202 3k9c_A Transcriptional regulat 80.1 20 0.00068 28.2 18.6 37 174-212 184-224 (289)
203 3ezl_A Acetoacetyl-COA reducta 80.0 10 0.00035 29.5 8.8 74 69-142 13-89 (256)
204 2gdz_A NAD+-dependent 15-hydro 79.8 15 0.00052 28.8 9.8 33 69-101 7-39 (267)
205 4imr_A 3-oxoacyl-(acyl-carrier 79.8 14 0.00049 29.4 9.7 71 70-140 34-106 (275)
206 4fc7_A Peroxisomal 2,4-dienoyl 79.6 21 0.00073 28.2 10.8 32 70-101 28-59 (277)
207 2x9g_A PTR1, pteridine reducta 79.6 17 0.00058 29.0 10.1 32 70-101 24-55 (288)
208 3u9l_A 3-oxoacyl-[acyl-carrier 79.4 24 0.00084 28.8 11.8 53 70-122 6-64 (324)
209 2pnf_A 3-oxoacyl-[acyl-carrier 79.4 15 0.00052 28.2 9.5 32 70-101 8-39 (248)
210 3l49_A ABC sugar (ribose) tran 79.3 21 0.00071 28.0 20.0 149 54-211 51-226 (291)
211 1piw_A Hypothetical zinc-type 79.1 9.3 0.00032 31.8 8.7 56 62-121 173-228 (360)
212 3jy6_A Transcriptional regulat 79.0 21 0.00072 27.8 14.2 37 174-212 180-220 (276)
213 3kzv_A Uncharacterized oxidore 79.0 12 0.0004 29.4 8.8 25 70-94 3-27 (254)
214 3lf2_A Short chain oxidoreduct 78.7 22 0.00075 27.9 11.1 32 69-100 8-39 (265)
215 2fzw_A Alcohol dehydrogenase c 78.4 8.5 0.00029 32.1 8.2 57 62-121 184-240 (373)
216 1sny_A Sniffer CG10964-PA; alp 78.4 9.7 0.00033 29.8 8.2 70 70-139 22-95 (267)
217 1pvv_A Otcase, ornithine carba 78.2 12 0.00041 31.1 8.8 62 62-124 149-216 (315)
218 3egc_A Putative ribose operon 78.1 23 0.00078 27.8 17.7 44 166-212 178-225 (291)
219 3tzq_B Short-chain type dehydr 77.9 24 0.00081 27.9 10.6 70 69-141 11-82 (271)
220 3gyb_A Transcriptional regulat 77.7 23 0.00078 27.6 10.3 98 110-211 111-214 (280)
221 3jv7_A ADH-A; dehydrogenase, n 77.6 13 0.00045 30.5 9.1 55 65-123 168-223 (345)
222 1uuf_A YAHK, zinc-type alcohol 77.6 9.8 0.00033 31.9 8.4 54 64-121 190-243 (369)
223 3i4f_A 3-oxoacyl-[acyl-carrier 77.5 11 0.00037 29.6 8.2 33 70-102 8-40 (264)
224 3k4h_A Putative transcriptiona 77.3 24 0.00082 27.6 18.9 45 164-211 182-230 (292)
225 2ae2_A Protein (tropinone redu 76.9 16 0.00055 28.6 9.1 73 69-141 9-83 (260)
226 1e7w_A Pteridine reductase; di 76.8 18 0.0006 29.0 9.4 103 70-186 10-116 (291)
227 3u0b_A Oxidoreductase, short c 76.3 14 0.00048 32.1 9.2 73 69-142 213-285 (454)
228 1hxh_A 3BETA/17BETA-hydroxyste 76.1 25 0.00087 27.3 10.6 31 70-100 7-37 (253)
229 3csu_A Protein (aspartate carb 75.8 10 0.00034 31.5 7.7 60 62-123 148-213 (310)
230 2qhx_A Pteridine reductase 1; 75.7 18 0.00061 29.7 9.3 103 70-186 47-153 (328)
231 3gv0_A Transcriptional regulat 75.5 27 0.00093 27.4 20.2 46 164-212 178-227 (288)
232 2ph3_A 3-oxoacyl-[acyl carrier 75.4 25 0.00085 26.8 10.9 31 70-100 2-32 (245)
233 1gud_A ALBP, D-allose-binding 75.4 16 0.00054 28.8 8.8 91 117-211 134-229 (288)
234 3h75_A Periplasmic sugar-bindi 75.1 32 0.0011 27.9 16.2 91 117-211 146-243 (350)
235 3llv_A Exopolyphosphatase-rela 75.0 15 0.00051 25.7 7.7 49 73-124 9-57 (141)
236 2r6j_A Eugenol synthase 1; phe 75.0 12 0.0004 30.2 8.0 54 71-124 13-67 (318)
237 3brq_A HTH-type transcriptiona 75.0 28 0.00095 27.2 20.0 37 174-212 199-239 (296)
238 3u5t_A 3-oxoacyl-[acyl-carrier 74.7 24 0.00082 27.9 9.6 73 70-142 28-103 (267)
239 3edm_A Short chain dehydrogena 74.7 19 0.00065 28.2 9.0 74 69-142 8-84 (259)
240 3huu_A Transcription regulator 74.5 30 0.001 27.4 18.3 158 47-211 40-240 (305)
241 3rku_A Oxidoreductase YMR226C; 74.4 13 0.00043 30.0 7.9 31 70-100 34-67 (287)
242 3dii_A Short-chain dehydrogena 74.3 28 0.00096 26.9 11.0 31 70-100 3-33 (247)
243 4ep1_A Otcase, ornithine carba 74.2 14 0.00046 31.1 8.1 62 62-124 173-240 (340)
244 3icc_A Putative 3-oxoacyl-(acy 74.1 28 0.00096 26.8 9.8 57 69-125 7-65 (255)
245 3tpc_A Short chain alcohol deh 74.1 24 0.00083 27.4 9.4 71 69-141 7-78 (257)
246 2h6e_A ADH-4, D-arabinose 1-de 74.0 15 0.0005 30.3 8.5 52 65-121 168-221 (344)
247 3ksu_A 3-oxoacyl-acyl carrier 74.0 21 0.00073 28.0 9.1 74 69-142 11-89 (262)
248 4fgs_A Probable dehydrogenase 74.0 18 0.00061 29.2 8.7 71 69-142 29-101 (273)
249 3ksm_A ABC-type sugar transpor 73.9 28 0.00097 26.8 17.2 148 55-211 49-223 (276)
250 2hq1_A Glucose/ribitol dehydro 73.9 21 0.0007 27.4 8.9 55 70-124 6-62 (247)
251 3kkj_A Amine oxidase, flavin-c 73.5 3.9 0.00013 30.9 4.5 29 73-101 5-33 (336)
252 3dbi_A Sugar-binding transcrip 73.4 34 0.0012 27.5 22.2 44 166-212 234-281 (338)
253 4eue_A Putative reductase CA_C 73.4 44 0.0015 28.7 13.2 100 41-142 34-149 (418)
254 3kke_A LACI family transcripti 73.1 33 0.0011 27.2 17.0 36 174-211 196-235 (303)
255 2i6u_A Otcase, ornithine carba 72.7 17 0.0006 29.9 8.4 61 62-124 142-210 (307)
256 3i6i_A Putative leucoanthocyan 72.5 18 0.00061 29.6 8.6 55 70-124 11-69 (346)
257 1vlv_A Otcase, ornithine carba 72.5 18 0.0006 30.2 8.4 61 62-124 161-229 (325)
258 4dvj_A Putative zinc-dependent 72.4 13 0.00045 30.9 7.8 58 62-122 160-223 (363)
259 2gk4_A Conserved hypothetical 72.3 5.7 0.0002 31.5 5.2 32 70-101 4-51 (232)
260 1zmt_A Haloalcohol dehalogenas 72.3 8.5 0.00029 30.1 6.3 52 71-122 3-54 (254)
261 1ae1_A Tropinone reductase-I; 72.2 21 0.0007 28.2 8.7 73 69-141 21-95 (273)
262 2gas_A Isoflavone reductase; N 72.2 8.8 0.0003 30.6 6.5 55 70-124 3-64 (307)
263 1ml4_A Aspartate transcarbamoy 72.1 8.6 0.00029 31.8 6.4 62 61-124 148-214 (308)
264 3m9w_A D-xylose-binding peripl 72.1 35 0.0012 27.0 17.3 46 163-210 176-223 (313)
265 3l6e_A Oxidoreductase, short-c 72.0 18 0.00061 28.0 8.1 68 70-141 4-74 (235)
266 3rot_A ABC sugar transporter, 72.0 34 0.0012 26.9 17.1 46 163-211 177-227 (297)
267 3e8x_A Putative NAD-dependent 71.8 12 0.00041 28.7 7.0 52 70-124 22-74 (236)
268 2qq5_A DHRS1, dehydrogenase/re 71.8 20 0.00068 28.0 8.4 71 70-140 6-78 (260)
269 3qp9_A Type I polyketide synth 71.6 24 0.00083 31.2 9.7 60 66-125 248-323 (525)
270 3m6i_A L-arabinitol 4-dehydrog 71.5 20 0.00069 29.6 8.7 57 61-120 172-228 (363)
271 2o23_A HADH2 protein; HSD17B10 71.4 33 0.0011 26.5 10.1 70 69-140 12-82 (265)
272 2zat_A Dehydrogenase/reductase 71.3 19 0.00066 28.0 8.2 72 69-140 14-87 (260)
273 3op4_A 3-oxoacyl-[acyl-carrier 71.2 16 0.00056 28.4 7.7 69 69-141 9-80 (248)
274 1ja9_A 4HNR, 1,3,6,8-tetrahydr 71.0 18 0.00063 28.2 8.1 72 70-141 22-96 (274)
275 1gee_A Glucose 1-dehydrogenase 70.9 22 0.00075 27.6 8.5 72 70-141 8-82 (261)
276 3v2h_A D-beta-hydroxybutyrate 70.7 38 0.0013 26.9 11.9 31 70-100 26-56 (281)
277 4e6p_A Probable sorbitol dehyd 70.5 21 0.00072 27.9 8.3 71 69-142 8-80 (259)
278 1dxh_A Ornithine carbamoyltran 70.2 18 0.00062 30.2 8.0 52 73-124 158-217 (335)
279 2fn9_A Ribose ABC transporter, 70.1 16 0.00055 28.7 7.6 46 163-211 180-226 (290)
280 1uls_A Putative 3-oxoacyl-acyl 70.1 35 0.0012 26.3 10.0 68 70-141 6-74 (245)
281 4a27_A Synaptic vesicle membra 70.0 19 0.00063 29.7 8.2 56 62-122 136-192 (349)
282 1duv_G Octase-1, ornithine tra 70.0 19 0.00064 30.1 8.0 52 73-124 158-217 (333)
283 2p91_A Enoyl-[acyl-carrier-pro 69.6 39 0.0013 26.7 9.8 72 70-142 22-97 (285)
284 3n74_A 3-ketoacyl-(acyl-carrie 69.5 20 0.0007 27.8 8.0 69 70-141 10-80 (261)
285 3ctm_A Carbonyl reductase; alc 69.4 27 0.00093 27.4 8.8 71 70-140 35-107 (279)
286 4hp8_A 2-deoxy-D-gluconate 3-d 69.4 20 0.00068 28.5 7.8 55 69-124 9-63 (247)
287 1xq1_A Putative tropinone redu 69.1 22 0.00074 27.7 8.1 54 70-123 15-69 (266)
288 1edo_A Beta-keto acyl carrier 69.0 30 0.001 26.3 8.8 73 70-142 2-77 (244)
289 3gxh_A Putative phosphatase (D 68.8 30 0.001 25.0 10.4 84 98-185 22-107 (157)
290 2fr1_A Erythromycin synthase, 68.5 33 0.0011 30.0 9.7 60 66-125 223-287 (486)
291 3e3m_A Transcriptional regulat 68.1 47 0.0016 27.0 18.6 42 166-210 242-287 (355)
292 2rjo_A Twin-arginine transloca 67.9 45 0.0016 26.7 14.8 47 163-211 185-233 (332)
293 4eso_A Putative oxidoreductase 67.7 24 0.00083 27.5 8.1 70 69-141 8-79 (255)
294 2z5l_A Tylkr1, tylactone synth 67.4 34 0.0012 30.2 9.6 60 66-125 256-320 (511)
295 2wyu_A Enoyl-[acyl carrier pro 67.3 42 0.0014 26.1 10.0 71 70-141 9-83 (261)
296 2cf5_A Atccad5, CAD, cinnamyl 66.8 24 0.00083 29.2 8.3 54 64-121 175-230 (357)
297 3gd5_A Otcase, ornithine carba 66.8 25 0.00085 29.3 8.1 62 62-124 151-218 (323)
298 1qsg_A Enoyl-[acyl-carrier-pro 66.7 43 0.0015 26.0 10.8 72 70-142 10-85 (265)
299 3ioy_A Short-chain dehydrogena 66.7 24 0.00081 28.7 8.1 74 69-142 8-85 (319)
300 1wma_A Carbonyl reductase [NAD 66.7 22 0.00074 27.6 7.6 73 69-141 4-79 (276)
301 1a3w_A Pyruvate kinase; allost 66.5 69 0.0024 28.3 11.3 123 85-213 283-428 (500)
302 3gvc_A Oxidoreductase, probabl 66.1 25 0.00085 28.0 7.9 68 70-141 30-100 (277)
303 3c3k_A Alanine racemase; struc 65.9 46 0.0016 26.0 12.9 42 168-212 178-223 (285)
304 2w37_A Ornithine carbamoyltran 65.8 31 0.0011 29.1 8.6 60 62-123 170-237 (359)
305 2pd4_A Enoyl-[acyl-carrier-pro 65.8 47 0.0016 26.1 11.2 72 70-142 7-82 (275)
306 3f1l_A Uncharacterized oxidore 65.8 45 0.0015 25.8 9.4 74 69-142 12-90 (252)
307 1xu9_A Corticosteroid 11-beta- 65.7 31 0.0011 27.3 8.5 54 70-123 29-84 (286)
308 4egf_A L-xylulose reductase; s 65.7 22 0.00074 28.0 7.4 72 70-141 21-95 (266)
309 3ic5_A Putative saccharopine d 65.7 26 0.00089 23.1 7.3 49 73-124 8-57 (118)
310 4a8t_A Putrescine carbamoyltra 65.6 29 0.00099 29.1 8.3 55 69-123 175-235 (339)
311 3slk_A Polyketide synthase ext 65.6 33 0.0011 32.1 9.6 59 67-125 528-592 (795)
312 4fs3_A Enoyl-[acyl-carrier-pro 65.5 18 0.00063 28.4 6.9 73 69-142 6-84 (256)
313 1yqd_A Sinapyl alcohol dehydro 65.4 28 0.00096 28.9 8.4 53 65-121 183-237 (366)
314 3m1a_A Putative dehydrogenase; 65.3 24 0.00083 27.8 7.7 70 70-141 6-76 (281)
315 4dqx_A Probable oxidoreductase 65.0 27 0.00094 27.7 8.0 69 70-141 28-98 (277)
316 3zv4_A CIS-2,3-dihydrobiphenyl 64.5 24 0.00081 28.1 7.5 70 69-141 5-76 (281)
317 2z1n_A Dehydrogenase; reductas 64.3 38 0.0013 26.3 8.6 33 69-101 7-39 (260)
318 4dyv_A Short-chain dehydrogena 64.2 31 0.001 27.3 8.1 68 70-141 29-99 (272)
319 2e7j_A SEP-tRNA:Cys-tRNA synth 64.0 29 0.001 28.1 8.2 51 72-123 71-121 (371)
320 2x7x_A Sensor protein; transfe 64.0 33 0.0011 27.5 8.4 148 56-212 54-225 (325)
321 3o38_A Short chain dehydrogena 64.0 47 0.0016 25.8 9.1 32 70-101 23-55 (266)
322 4a8p_A Putrescine carbamoyltra 63.9 31 0.0011 29.1 8.3 35 69-103 153-187 (355)
323 3cs3_A Sugar-binding transcrip 63.6 49 0.0017 25.6 14.4 45 165-211 167-215 (277)
324 1l7d_A Nicotinamide nucleotide 63.5 12 0.00042 31.6 5.8 49 68-120 171-219 (384)
325 1u7z_A Coenzyme A biosynthesis 63.1 12 0.00041 29.4 5.3 32 69-100 8-55 (226)
326 3c1o_A Eugenol synthase; pheny 62.9 18 0.00061 29.0 6.6 55 70-124 5-65 (321)
327 2fwm_X 2,3-dihydro-2,3-dihydro 62.4 52 0.0018 25.4 9.2 65 70-142 8-72 (250)
328 2ekp_A 2-deoxy-D-gluconate 3-d 62.0 33 0.0011 26.3 7.8 51 70-125 3-53 (239)
329 2bgk_A Rhizome secoisolaricire 62.0 54 0.0018 25.5 9.7 31 70-100 17-47 (278)
330 2b4q_A Rhamnolipids biosynthes 61.9 28 0.00096 27.6 7.5 72 70-142 30-103 (276)
331 1yde_A Retinal dehydrogenase/r 61.8 56 0.0019 25.6 9.5 69 69-141 9-79 (270)
332 2dq4_A L-threonine 3-dehydroge 61.7 30 0.001 28.4 7.8 52 63-120 160-212 (343)
333 3d8u_A PURR transcriptional re 61.3 53 0.0018 25.2 17.0 45 164-211 171-219 (275)
334 3p19_A BFPVVD8, putative blue 61.3 29 0.00099 27.3 7.4 68 70-141 17-84 (266)
335 1nff_A Putative oxidoreductase 61.3 31 0.0011 26.9 7.6 32 70-101 8-39 (260)
336 3h5t_A Transcriptional regulat 61.2 65 0.0022 26.2 14.9 44 165-211 259-306 (366)
337 3rss_A Putative uncharacterize 61.1 34 0.0012 30.2 8.4 51 70-120 53-110 (502)
338 3gg9_A D-3-phosphoglycerate de 61.1 40 0.0014 28.2 8.5 104 72-198 162-267 (352)
339 8abp_A L-arabinose-binding pro 60.8 58 0.002 25.5 14.1 49 163-212 184-235 (306)
340 1h5q_A NADP-dependent mannitol 60.7 53 0.0018 25.2 8.9 73 70-142 15-90 (265)
341 1wwk_A Phosphoglycerate dehydr 60.7 67 0.0023 26.1 10.3 103 72-198 144-248 (307)
342 3ppi_A 3-hydroxyacyl-COA dehyd 60.6 32 0.0011 27.1 7.6 66 70-138 31-98 (281)
343 1x13_A NAD(P) transhydrogenase 60.6 18 0.00061 30.9 6.4 49 69-121 172-220 (401)
344 4ggo_A Trans-2-enoyl-COA reduc 60.4 41 0.0014 28.8 8.4 74 69-142 50-138 (401)
345 4egf_A L-xylulose reductase; s 60.3 41 0.0014 26.3 8.2 74 106-186 34-109 (266)
346 2d1y_A Hypothetical protein TT 60.3 57 0.002 25.2 9.6 33 70-102 7-39 (256)
347 3get_A Histidinol-phosphate am 60.0 37 0.0013 27.5 8.1 81 73-155 85-166 (365)
348 3o1i_D Periplasmic protein TOR 59.8 60 0.002 25.3 15.0 42 163-209 184-227 (304)
349 4fcc_A Glutamate dehydrogenase 59.6 69 0.0024 27.9 9.9 50 51-100 216-265 (450)
350 3g85_A Transcriptional regulat 59.6 46 0.0016 25.9 8.4 43 164-209 178-224 (289)
351 3rd5_A Mypaa.01249.C; ssgcid, 59.1 55 0.0019 25.9 8.9 54 69-125 16-70 (291)
352 3f9t_A TDC, L-tyrosine decarbo 59.0 31 0.0011 28.0 7.5 54 72-125 88-153 (397)
353 2o20_A Catabolite control prot 59.0 68 0.0023 25.7 19.9 36 175-212 239-278 (332)
354 1hdc_A 3-alpha, 20 beta-hydrox 58.8 54 0.0018 25.4 8.6 70 69-141 5-76 (254)
355 4e4t_A Phosphoribosylaminoimid 58.8 22 0.00076 30.4 6.7 36 66-102 32-67 (419)
356 1qyc_A Phenylcoumaran benzylic 58.8 53 0.0018 25.9 8.7 54 70-123 5-64 (308)
357 2wm3_A NMRA-like family domain 58.8 41 0.0014 26.5 8.0 54 70-124 6-60 (299)
358 3cq5_A Histidinol-phosphate am 58.6 26 0.0009 28.6 7.0 80 73-154 95-176 (369)
359 3ly1_A Putative histidinol-pho 58.5 29 0.00099 28.0 7.2 82 73-155 71-154 (354)
360 1pg5_A Aspartate carbamoyltran 58.4 15 0.0005 30.3 5.2 60 62-124 143-206 (299)
361 4dry_A 3-oxoacyl-[acyl-carrier 58.3 33 0.0011 27.3 7.3 71 70-141 34-108 (281)
362 3ak4_A NADH-dependent quinucli 58.3 62 0.0021 25.0 10.3 68 70-141 13-83 (263)
363 1qyd_A Pinoresinol-lariciresin 58.2 28 0.00096 27.6 6.9 54 70-123 5-63 (313)
364 1tjy_A Sugar transport protein 57.9 70 0.0024 25.5 16.2 45 163-210 178-223 (316)
365 3f1l_A Uncharacterized oxidore 57.8 47 0.0016 25.7 8.0 86 95-185 13-102 (252)
366 3jtm_A Formate dehydrogenase, 57.7 70 0.0024 26.7 9.4 105 72-198 166-272 (351)
367 2et6_A (3R)-hydroxyacyl-COA de 57.6 84 0.0029 28.2 10.5 70 69-141 322-392 (604)
368 4g2n_A D-isomer specific 2-hyd 57.4 56 0.0019 27.2 8.8 103 72-198 175-279 (345)
369 3sds_A Ornithine carbamoyltran 57.4 85 0.0029 26.3 9.9 46 68-113 187-234 (353)
370 3oig_A Enoyl-[acyl-carrier-pro 57.4 42 0.0014 26.1 7.8 84 95-186 8-98 (266)
371 3mje_A AMPHB; rossmann fold, o 57.3 77 0.0026 27.8 10.0 56 70-125 240-300 (496)
372 2izz_A Pyrroline-5-carboxylate 57.0 77 0.0026 25.7 11.1 118 73-212 25-146 (322)
373 1leh_A Leucine dehydrogenase; 56.8 61 0.0021 27.3 8.9 65 52-120 153-221 (364)
374 3g1w_A Sugar ABC transporter; 56.8 69 0.0023 25.0 18.2 45 164-211 177-223 (305)
375 4fs3_A Enoyl-[acyl-carrier-pro 56.7 68 0.0023 25.0 10.1 40 55-99 23-63 (256)
376 2wsb_A Galactitol dehydrogenas 56.7 51 0.0017 25.2 8.1 32 70-101 12-43 (254)
377 3f9i_A 3-oxoacyl-[acyl-carrier 56.6 27 0.00093 26.9 6.4 34 68-101 13-46 (249)
378 2dwc_A PH0318, 433AA long hypo 56.6 89 0.0031 26.3 11.7 31 72-102 21-51 (433)
379 3hut_A Putative branched-chain 56.4 76 0.0026 25.4 10.9 131 71-211 74-229 (358)
380 2g76_A 3-PGDH, D-3-phosphoglyc 56.3 44 0.0015 27.7 7.9 103 72-198 167-271 (335)
381 3d3j_A Enhancer of mRNA-decapp 56.3 49 0.0017 27.1 8.1 49 71-119 134-190 (306)
382 3ce6_A Adenosylhomocysteinase; 56.3 44 0.0015 29.4 8.2 97 64-188 269-365 (494)
383 2nm0_A Probable 3-oxacyl-(acyl 56.3 60 0.0021 25.2 8.5 64 70-142 22-85 (253)
384 3nyw_A Putative oxidoreductase 55.7 69 0.0024 24.7 10.2 72 70-142 8-85 (250)
385 1jye_A Lactose operon represso 55.7 32 0.0011 28.0 7.0 45 165-212 229-277 (349)
386 4dry_A 3-oxoacyl-[acyl-carrier 55.6 46 0.0016 26.4 7.8 75 106-186 47-122 (281)
387 2rir_A Dipicolinate synthase, 55.6 51 0.0018 26.5 8.1 49 68-120 156-204 (300)
388 3h2s_A Putative NADH-flavin re 55.6 39 0.0013 25.2 7.1 50 72-124 3-52 (224)
389 3ffh_A Histidinol-phosphate am 55.5 22 0.00077 28.8 6.0 82 73-155 87-168 (363)
390 3tl3_A Short-chain type dehydr 55.4 47 0.0016 25.7 7.7 50 70-124 10-59 (257)
391 3q2o_A Phosphoribosylaminoimid 55.3 24 0.00082 29.5 6.2 36 66-102 11-46 (389)
392 3aoe_E Glutamate dehydrogenase 55.2 69 0.0024 27.6 9.1 50 51-101 199-249 (419)
393 1zq6_A Otcase, ornithine carba 55.2 60 0.002 27.4 8.5 45 80-124 207-258 (359)
394 3orq_A N5-carboxyaminoimidazol 54.9 22 0.00074 29.8 5.9 34 68-102 11-44 (377)
395 3d3k_A Enhancer of mRNA-decapp 54.7 43 0.0015 26.7 7.3 32 71-102 87-121 (259)
396 1yo6_A Putative carbonyl reduc 54.6 32 0.0011 26.2 6.5 33 70-102 4-38 (250)
397 1id1_A Putative potassium chan 54.6 40 0.0014 23.8 6.6 30 73-102 6-35 (153)
398 3nyw_A Putative oxidoreductase 54.4 48 0.0016 25.7 7.6 74 106-185 21-97 (250)
399 2pd6_A Estradiol 17-beta-dehyd 54.2 27 0.00091 27.1 6.0 32 70-101 8-39 (264)
400 4hy3_A Phosphoglycerate oxidor 54.2 97 0.0033 26.0 10.0 112 72-210 178-291 (365)
401 3oz2_A Digeranylgeranylglycero 53.6 14 0.00048 30.2 4.5 28 73-100 7-34 (397)
402 3d4o_A Dipicolinate synthase s 53.6 84 0.0029 25.1 10.2 64 53-120 138-202 (293)
403 3p2y_A Alanine dehydrogenase/p 53.5 26 0.00088 29.9 6.1 48 72-122 186-233 (381)
404 2fvy_A D-galactose-binding per 53.3 78 0.0027 24.7 15.3 47 163-211 190-238 (309)
405 2dtx_A Glucose 1-dehydrogenase 53.3 78 0.0027 24.6 9.4 33 70-102 9-41 (264)
406 1zk4_A R-specific alcohol dehy 53.0 52 0.0018 25.1 7.5 32 70-101 7-38 (251)
407 4hb9_A Similarities with proba 53.0 17 0.00057 30.0 4.8 28 73-100 4-31 (412)
408 1oaa_A Sepiapterin reductase; 52.2 54 0.0019 25.3 7.6 71 70-140 7-84 (259)
409 3tb6_A Arabinose metabolism tr 52.2 80 0.0027 24.4 18.4 156 48-211 29-239 (298)
410 3ipc_A ABC transporter, substr 51.9 63 0.0021 25.9 8.2 145 54-211 59-228 (356)
411 4hvk_A Probable cysteine desul 51.7 38 0.0013 27.3 6.8 84 72-155 62-151 (382)
412 3slk_A Polyketide synthase ext 51.6 10 0.00036 35.5 3.6 39 62-100 339-377 (795)
413 3grf_A Ornithine carbamoyltran 51.6 53 0.0018 27.3 7.6 46 79-124 172-227 (328)
414 3bbl_A Regulatory protein of L 51.3 84 0.0029 24.4 17.6 47 163-212 175-227 (287)
415 3t4x_A Oxidoreductase, short c 51.1 60 0.002 25.3 7.7 56 69-124 10-68 (267)
416 1oth_A Protein (ornithine tran 50.7 34 0.0012 28.4 6.2 61 62-123 149-215 (321)
417 2bma_A Glutamate dehydrogenase 50.4 67 0.0023 28.1 8.3 50 51-101 233-283 (470)
418 3ew7_A LMO0794 protein; Q8Y8U8 50.0 74 0.0025 23.4 9.8 49 72-124 3-51 (221)
419 3d3w_A L-xylulose reductase; u 49.9 66 0.0023 24.4 7.7 53 69-124 7-61 (244)
420 3aog_A Glutamate dehydrogenase 49.7 93 0.0032 27.0 9.0 50 51-101 216-266 (440)
421 4gkb_A 3-oxoacyl-[acyl-carrier 49.7 59 0.002 25.7 7.4 72 107-185 22-93 (258)
422 3l4b_C TRKA K+ channel protien 49.6 80 0.0027 23.7 12.7 49 73-124 3-52 (218)
423 2ekl_A D-3-phosphoglycerate de 49.4 1E+02 0.0036 25.0 10.9 106 68-198 141-248 (313)
424 2bkw_A Alanine-glyoxylate amin 49.0 44 0.0015 27.1 6.8 82 71-154 60-149 (385)
425 4dio_A NAD(P) transhydrogenase 48.9 39 0.0013 29.0 6.5 48 72-122 192-239 (405)
426 3ruf_A WBGU; rossmann fold, UD 48.8 1E+02 0.0035 24.7 9.9 33 70-102 26-58 (351)
427 2pi1_A D-lactate dehydrogenase 48.7 88 0.003 25.8 8.6 102 72-198 143-246 (334)
428 1cyd_A Carbonyl reductase; sho 48.6 63 0.0022 24.5 7.3 53 69-124 7-61 (244)
429 2ehd_A Oxidoreductase, oxidore 48.3 85 0.0029 23.6 10.2 67 70-140 6-74 (234)
430 1jx6_A LUXP protein; protein-l 48.2 1E+02 0.0035 24.5 15.3 45 164-211 224-269 (342)
431 4fgs_A Probable dehydrogenase 48.2 49 0.0017 26.6 6.7 86 92-186 27-114 (273)
432 4e5n_A Thermostable phosphite 48.2 70 0.0024 26.4 7.9 104 72-198 147-252 (330)
433 3clk_A Transcription regulator 47.9 95 0.0032 24.1 15.8 45 164-212 176-224 (290)
434 3tka_A Ribosomal RNA small sub 47.9 14 0.00048 31.1 3.4 49 160-211 41-91 (347)
435 2tmg_A Protein (glutamate dehy 47.8 1.3E+02 0.0046 25.7 9.8 50 51-101 190-241 (415)
436 2iks_A DNA-binding transcripti 47.8 96 0.0033 24.1 15.5 37 174-212 196-236 (293)
437 3o38_A Short chain dehydrogena 47.7 76 0.0026 24.5 7.8 12 201-212 195-206 (266)
438 1ek6_A UDP-galactose 4-epimera 47.6 81 0.0028 25.3 8.2 31 70-100 3-33 (348)
439 3snr_A Extracellular ligand-bi 47.4 1E+02 0.0036 24.4 11.8 142 55-210 59-224 (362)
440 2rgy_A Transcriptional regulat 47.3 98 0.0033 24.0 19.7 46 164-212 179-228 (290)
441 2o8n_A APOA-I binding protein; 47.3 28 0.00094 28.1 5.0 49 71-119 81-136 (265)
442 2gqw_A Ferredoxin reductase; f 47.2 54 0.0018 27.5 7.2 52 69-121 145-206 (408)
443 1eg5_A Aminotransferase; PLP-d 47.1 46 0.0016 26.9 6.6 53 73-125 64-122 (384)
444 2vz8_A Fatty acid synthase; tr 46.7 1.6E+02 0.0054 31.5 11.7 73 66-138 1881-1959(2512)
445 3un1_A Probable oxidoreductase 46.7 52 0.0018 25.7 6.7 33 70-102 29-61 (260)
446 2ywl_A Thioredoxin reductase r 46.6 34 0.0011 24.7 5.2 31 72-102 3-33 (180)
447 3fsl_A Aromatic-amino-acid ami 46.6 59 0.002 26.6 7.3 53 72-124 97-150 (397)
448 3r6d_A NAD-dependent epimerase 46.3 74 0.0025 23.7 7.3 50 70-122 6-57 (221)
449 1gtm_A Glutamate dehydrogenase 46.2 68 0.0023 27.6 7.6 51 51-102 192-245 (419)
450 2h7i_A Enoyl-[acyl-carrier-pro 46.2 69 0.0024 24.9 7.3 69 70-141 8-81 (269)
451 3ek2_A Enoyl-(acyl-carrier-pro 46.1 88 0.003 24.1 7.9 74 106-186 30-103 (271)
452 1spx_A Short-chain reductase f 46.0 44 0.0015 26.1 6.1 32 70-101 7-38 (278)
453 2x5d_A Probable aminotransfera 46.0 77 0.0026 26.2 8.0 81 73-154 102-184 (412)
454 2g1u_A Hypothetical protein TM 45.9 21 0.00073 25.5 3.9 47 72-121 21-68 (155)
455 4ffl_A PYLC; amino acid, biosy 45.7 30 0.001 28.5 5.2 109 72-187 3-137 (363)
456 3gbc_A Pyrazinamidase/nicotina 45.7 90 0.0031 23.2 7.8 59 58-120 118-183 (186)
457 3h5o_A Transcriptional regulat 45.4 1.2E+02 0.004 24.3 18.0 45 165-212 230-278 (339)
458 3oj0_A Glutr, glutamyl-tRNA re 45.4 60 0.0021 22.6 6.3 47 70-120 22-69 (144)
459 1lss_A TRK system potassium up 45.3 68 0.0023 21.7 7.3 48 73-123 7-55 (140)
460 2ioy_A Periplasmic sugar-bindi 45.3 1E+02 0.0036 23.8 18.0 147 56-211 49-218 (283)
461 2a4k_A 3-oxoacyl-[acyl carrier 45.2 1.1E+02 0.0036 23.8 9.4 69 70-141 7-77 (263)
462 2dri_A D-ribose-binding protei 45.2 1E+02 0.0035 23.6 17.6 52 156-211 165-217 (271)
463 2h3h_A Sugar ABC transporter, 45.1 1.1E+02 0.0038 24.0 17.2 46 163-211 171-218 (313)
464 3vtz_A Glucose 1-dehydrogenase 45.1 1E+02 0.0036 24.0 8.3 65 69-141 14-78 (269)
465 3k92_A NAD-GDH, NAD-specific g 45.0 60 0.0021 28.0 7.1 50 51-101 202-252 (424)
466 3gbv_A Putative LACI-family tr 45.0 1.1E+02 0.0036 23.7 14.3 45 163-211 189-234 (304)
467 1vp8_A Hypothetical protein AF 44.9 84 0.0029 24.1 7.1 43 162-210 32-74 (201)
468 1vjo_A Alanine--glyoxylate ami 44.9 50 0.0017 27.0 6.5 81 72-154 87-171 (393)
469 3nnk_A Ureidoglycine-glyoxylat 44.9 71 0.0024 26.1 7.5 81 73-154 67-150 (411)
470 2h78_A Hibadh, 3-hydroxyisobut 44.9 70 0.0024 25.4 7.3 44 72-118 5-48 (302)
471 3lvm_A Cysteine desulfurase; s 44.9 73 0.0025 26.3 7.6 83 73-155 88-176 (423)
472 1kjq_A GART 2, phosphoribosylg 44.9 1.3E+02 0.0044 24.7 9.4 54 72-125 13-83 (391)
473 3b8x_A WBDK, pyridoxamine 5-ph 44.8 50 0.0017 27.1 6.5 53 73-125 52-110 (390)
474 3e61_A Putative transcriptiona 44.5 1E+02 0.0036 23.5 15.7 37 174-212 176-216 (277)
475 4a5l_A Thioredoxin reductase; 44.5 21 0.00072 28.3 4.0 28 73-100 7-34 (314)
476 2cul_A Glucose-inhibited divis 44.5 26 0.0009 26.9 4.5 30 73-102 6-35 (232)
477 2vdc_G Glutamate synthase [NAD 44.4 86 0.0029 26.9 8.1 52 69-121 264-321 (456)
478 3kjx_A Transcriptional regulat 44.4 1.2E+02 0.0041 24.2 19.4 44 165-211 238-285 (344)
479 4gcm_A TRXR, thioredoxin reduc 44.3 25 0.00085 28.0 4.5 28 73-100 9-36 (312)
480 3dzz_A Putative pyridoxal 5'-p 44.2 58 0.002 26.4 6.8 51 73-124 88-138 (391)
481 1vlj_A NADH-dependent butanol 44.1 1.5E+02 0.005 25.1 10.6 43 166-212 94-153 (407)
482 3n58_A Adenosylhomocysteinase; 44.1 1.1E+02 0.0036 26.8 8.5 53 63-119 241-293 (464)
483 2vpq_A Acetyl-COA carboxylase; 44.0 71 0.0024 27.1 7.5 28 73-100 4-31 (451)
484 3enk_A UDP-glucose 4-epimerase 43.9 1.2E+02 0.0041 24.1 10.1 33 70-102 6-38 (341)
485 3q98_A Transcarbamylase; rossm 43.9 51 0.0018 28.2 6.4 44 80-123 209-258 (399)
486 2dgk_A GAD-beta, GADB, glutama 43.8 65 0.0022 27.2 7.3 52 73-125 106-169 (452)
487 4h15_A Short chain alcohol deh 43.8 83 0.0028 24.8 7.4 65 69-142 11-76 (261)
488 4fk1_A Putative thioredoxin re 43.7 26 0.00089 27.9 4.5 29 72-100 8-36 (304)
489 3g0o_A 3-hydroxyisobutyrate de 43.6 68 0.0023 25.7 7.0 45 72-119 9-53 (303)
490 3t37_A Probable dehydrogenase; 43.5 15 0.00053 31.9 3.2 37 174-213 16-52 (526)
491 3fbg_A Putative arginate lyase 43.0 78 0.0027 25.8 7.4 83 106-208 165-247 (346)
492 2eez_A Alanine dehydrogenase; 43.0 1.3E+02 0.0046 24.8 9.0 47 70-120 167-214 (369)
493 3guy_A Short-chain dehydrogena 42.9 80 0.0027 23.8 7.1 50 71-123 3-53 (230)
494 1lu9_A Methylene tetrahydromet 42.9 76 0.0026 25.2 7.2 54 44-99 95-149 (287)
495 3rp8_A Flavoprotein monooxygen 42.9 30 0.001 28.9 4.8 31 72-102 25-55 (407)
496 2hmt_A YUAA protein; RCK, KTN, 42.7 50 0.0017 22.5 5.4 48 73-123 9-56 (144)
497 3sg0_A Extracellular ligand-bi 42.7 1.3E+02 0.0045 24.1 11.8 148 54-211 78-249 (386)
498 2aef_A Calcium-gated potassium 42.5 1.1E+02 0.0037 23.2 10.0 48 72-124 11-58 (234)
499 1bgv_A Glutamate dehydrogenase 42.3 85 0.0029 27.3 7.7 50 51-101 211-261 (449)
500 2qu7_A Putative transcriptiona 42.1 56 0.0019 25.4 6.2 44 164-212 179-226 (288)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=7.3e-56 Score=382.18 Aligned_cols=216 Identities=58% Similarity=0.992 Sum_probs=201.7
Q ss_pred cchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHH
Q 043209 6 CAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGM 85 (221)
Q Consensus 6 ~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~al 85 (221)
..+++.+.+.+|+|||+++++|++.+|++||+|+|++|||||||||++.+++.+++++|.+.+|+++||++|+||||.|+
T Consensus 23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al 102 (344)
T 3vc3_A 23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM 102 (344)
T ss_dssp CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence 35778899999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209 86 ACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG 165 (221)
Q Consensus 86 A~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 165 (221)
|++|+.+|++|+||||++++..|++.++.+||+|+.++...++.+....+.++..+.++.+|+++|+||.++.+||.|++
T Consensus 103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g 182 (344)
T 3vc3_A 103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG 182 (344)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999998754455666666677777778999999999999988999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~~ 221 (221)
.||++|+++.+|+||+|+|+||+++|++.++|+.+|++|||+|||++|+.+.++.+
T Consensus 183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~ 238 (344)
T 3vc3_A 183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKP 238 (344)
T ss_dssp HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCC
T ss_pred HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCC
Confidence 99999998899999999999999999999999999999999999999999988753
No 2
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=8.3e-54 Score=368.13 Aligned_cols=217 Identities=42% Similarity=0.772 Sum_probs=202.4
Q ss_pred ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG 82 (221)
Q Consensus 3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~ 82 (221)
..+..+++++...+++|||+++++| +..|++||+|+|++|||||||||++.+++.+++++|.+.+|.+.||++|+||||
T Consensus 6 ~~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g 84 (334)
T 3tbh_A 6 DKSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTG 84 (334)
T ss_dssp CTTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHH
T ss_pred hhHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHH
Confidence 3456688899999999999999999 778899999999999999999999999999999999888886546999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209 83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE 162 (221)
Q Consensus 83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~ 162 (221)
+|+|++|+.+|++|+||||++.+..|++.++.+||+|+.++...+++++++.+++++++.++++|++||+||.|+.+||.
T Consensus 85 ~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~ 164 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEE 164 (334)
T ss_dssp HHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHH
Confidence 99999999999999999999999999999999999999998765588999999999988878999999999998888999
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~ 220 (221)
|++.||++|+++.+|+||+|+|+||+++|++.++|+.+|++|||||||++++++.+|.
T Consensus 165 t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~ 222 (334)
T 3tbh_A 165 TTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGK 222 (334)
T ss_dssp THHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCC
T ss_pred HHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCC
Confidence 9999999999778999999999999999999999999999999999999999987654
No 3
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=5.3e-54 Score=378.30 Aligned_cols=217 Identities=61% Similarity=1.079 Sum_probs=204.6
Q ss_pred cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209 4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI 83 (221)
Q Consensus 4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~ 83 (221)
+.+++++++.+.+++|||+++++|++.+|++||+|+|++||+||||||++.+++.+++++|.+.+|.++||++|+||||+
T Consensus 109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~ 188 (430)
T 4aec_A 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI 188 (430)
T ss_dssp SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence 44567899999999999999999999899999999999999999999999999999999999988877899999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209 84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET 163 (221)
Q Consensus 84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 163 (221)
|+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.+||.|
T Consensus 189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T 268 (430)
T 4aec_A 189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET 268 (430)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999986546889999999999987789999999999997779999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~ 220 (221)
++.||++|+++++|+||+|+|+||+++|++.++|+.+|++|||||||++++++.+|.
T Consensus 269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~ 325 (430)
T 4aec_A 269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325 (430)
T ss_dssp HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCC
T ss_pred HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCC
Confidence 999999999778999999999999999999999999999999999999999887764
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.7e-53 Score=364.66 Aligned_cols=212 Identities=67% Similarity=1.104 Sum_probs=199.7
Q ss_pred hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC 87 (221)
Q Consensus 8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~ 87 (221)
+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.|+..+||++|+||||.|+|+
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~ 84 (322)
T 1z7w_A 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF 84 (322)
T ss_dssp CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHH
Confidence 57889999999999999999988889999999999999999999999999999999988887667999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209 88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE 167 (221)
Q Consensus 88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 167 (221)
+|+.+|++|+||+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.++..||.|++.|
T Consensus 85 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E 164 (322)
T 1z7w_A 85 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE 164 (322)
T ss_dssp HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875457889999999999887899999999999987799999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209 168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~ 219 (221)
|++|+++++|+||+|+|+||+++|++.+||+.+|++|||+|||++++.+.+|
T Consensus 165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~ 216 (322)
T 1z7w_A 165 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGG 216 (322)
T ss_dssp HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTC
T ss_pred HHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCC
Confidence 9999976899999999999999999999999999999999999999888765
No 5
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=9.9e-53 Score=360.25 Aligned_cols=209 Identities=40% Similarity=0.619 Sum_probs=196.3
Q ss_pred cchhHHhhcccCCCceeecccccCC-------CCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 043209 6 CAIANDITELIGNTPMVYLNNIVDG-------CKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS 78 (221)
Q Consensus 6 ~~~~~~~~~~~~~TPl~~~~~l~~~-------~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~ass 78 (221)
+.+++++.+.+++|||+++++|++. .|.+||+|+|++|||||||||++.+++.++.++|.+.++. +||++|+
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~-~vv~aSs 81 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGA-TILEPTS 81 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTC-EEEEECS
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEeCC
Confidence 4578889999999999999999987 7789999999999999999999999999999999887764 5999999
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHH
Q 043209 79 GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPK 158 (221)
Q Consensus 79 GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~ 158 (221)
||||+|+|++|+.+|++|+||+|++.+..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.+++
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~ 161 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD 161 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999976568999999999999986699999999999997
Q ss_pred HHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 159 THYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 159 ~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
+||.|++.||++|++ .+|+||+|+|+||+++|++.++++.+|++|||+|||++++.+
T Consensus 162 ~g~~t~~~Ei~~q~~-~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~ 218 (325)
T 3dwg_A 162 SHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV 218 (325)
T ss_dssp HHHHTHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch
Confidence 799999999999996 499999999999999999999999999999999999999876
No 6
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=4.5e-52 Score=353.03 Aligned_cols=206 Identities=44% Similarity=0.732 Sum_probs=192.5
Q ss_pred HHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209 10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA 89 (221)
Q Consensus 10 ~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a 89 (221)
+++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.++ .+||++|+||||.|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence 467788999999999999988899999999999999999999999999999999977776 4599999999999999999
Q ss_pred HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209 90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW 169 (221)
Q Consensus 90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 169 (221)
+.+|++|+||+|++++..+++.++.+||+|+.++.+.+++++.+.+++++++.+++ |++||+|+.++++||.|++.||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997656899999999999885577 99999999998879999999999
Q ss_pred HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
+|++.++|+||+|+|+||+++|++.++|+.+|++|||+|||++++++.
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~ 207 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIP 207 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCT
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCcccc
Confidence 999767999999999999999999999999999999999999998875
No 7
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=6.4e-52 Score=353.50 Aligned_cols=212 Identities=50% Similarity=0.845 Sum_probs=196.8
Q ss_pred chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209 7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA 86 (221)
Q Consensus 7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA 86 (221)
.+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.++. +||++|+||||+|+|
T Consensus 5 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~-~vv~assGN~g~alA 83 (313)
T 2q3b_A 5 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDT-IILEPTSGNTGIALA 83 (313)
T ss_dssp CCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECSSHHHHHHH
T ss_pred chhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHHHH
Confidence 4678899999999999999999888899999999999999999999999999999998777764 599999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209 87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP 166 (221)
Q Consensus 87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 166 (221)
++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.+..+++++|+||.++++||.|++.
T Consensus 84 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~ 163 (313)
T 2q3b_A 84 MVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAE 163 (313)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999987545889999999999988545889999999999878999999
Q ss_pred HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209 167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219 (221)
Q Consensus 167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~ 219 (221)
||++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+..+
T Consensus 164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~ 216 (313)
T 2q3b_A 164 EVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGG 216 (313)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTC
T ss_pred HHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCC
Confidence 99999976799999999999999999999999999999999999999888653
No 8
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=6e-52 Score=357.80 Aligned_cols=216 Identities=44% Similarity=0.703 Sum_probs=198.5
Q ss_pred CccccchhHHhhcccCCCceeecccccC----CCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC
Q 043209 2 GSEKCAIANDITELIGNTPMVYLNNIVD----GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECT 77 (221)
Q Consensus 2 ~~~~~~~~~~~~~~~~~TPl~~~~~l~~----~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~as 77 (221)
.++...+++++.+.+++|||+++++|++ ..|++||+|+|++|||||||||++.+++.++.++|.+.++. +||++|
T Consensus 7 ~~~~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~-~vv~aS 85 (343)
T 2pqm_A 7 SSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGM-EIIEST 85 (343)
T ss_dssp CCCCCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTC-EEEEEC
T ss_pred CCCchhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEEC
Confidence 3445567889999999999999999988 78899999999999999999999999999999999777764 599999
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe-eecCCCCCCcc
Q 043209 78 SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPAN 156 (221)
Q Consensus 78 sGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~ 156 (221)
+||||+|+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.++. +++++|+|+.+
T Consensus 86 sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n 165 (343)
T 2pqm_A 86 SGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDN 165 (343)
T ss_dssp SSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHH
T ss_pred CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhH
Confidence 99999999999999999999999999999999999999999999987545789999999999987555 77899999999
Q ss_pred HHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209 157 PKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219 (221)
Q Consensus 157 ~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~ 219 (221)
+.+||.|++ ||++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.++
T Consensus 166 ~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~ 227 (343)
T 2pqm_A 166 TAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGK 227 (343)
T ss_dssp HHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTC
T ss_pred HHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccC
Confidence 877999999 99999976799999999999999999999999999999999999999888764
No 9
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=6e-52 Score=354.10 Aligned_cols=207 Identities=42% Similarity=0.697 Sum_probs=192.3
Q ss_pred hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC 87 (221)
Q Consensus 8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~ 87 (221)
+++++...+++|||+++++| + .|.+||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||.|+|+
T Consensus 3 ~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A~ 79 (316)
T 1y7l_A 3 IYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAY 79 (316)
T ss_dssp CCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHH
T ss_pred chhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHH
Confidence 57788999999999999999 6 889999999999999999999999999999999977766 45999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe-eecCCCCCCccHHHHHhhHHH
Q 043209 88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGP 166 (221)
Q Consensus 88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~~ 166 (221)
+|+.+|++|+||||++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++. +|++||+|+.++++||.|++.
T Consensus 80 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 159 (316)
T 1y7l_A 80 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP 159 (316)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987545889999999999987667 889999999999878999999
Q ss_pred HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209 167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN 217 (221)
Q Consensus 167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~ 217 (221)
||++|++.++|+||+|+|+||+++|++.+|++.+ |++|||+|||++++.+.
T Consensus 160 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~ 211 (316)
T 1y7l_A 160 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVIS 211 (316)
T ss_dssp HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHH
T ss_pred HHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCcccc
Confidence 9999997669999999999999999999999998 99999999999997654
No 10
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=2e-51 Score=349.11 Aligned_cols=207 Identities=50% Similarity=0.827 Sum_probs=191.6
Q ss_pred hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCChHHHHHHHHHH
Q 043209 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK-TVLIECTSGNTGIGMACFAA 90 (221)
Q Consensus 12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~-~~vv~assGN~~~alA~~a~ 90 (221)
+.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.++. .+||++|+||||+|+|++|+
T Consensus 3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH
T ss_pred hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHH
Confidence 46779999999999999888999999999999999999999999999999998777664 15999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209 91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE 170 (221)
Q Consensus 91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 170 (221)
.+|++|+||+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++ ++++|+++|+|+.++.+||.|++.||++
T Consensus 83 ~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~ 161 (304)
T 1ve1_A 83 SRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYE 161 (304)
T ss_dssp HHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999765588999999999888 4789999999999998558999999999
Q ss_pred hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209 171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219 (221)
Q Consensus 171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~ 219 (221)
|++.++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.+|
T Consensus 162 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g 210 (304)
T 1ve1_A 162 ALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGG 210 (304)
T ss_dssp HTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTC
T ss_pred HcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCC
Confidence 9976799999999999999999999999999999999999999888765
No 11
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.8e-52 Score=353.02 Aligned_cols=210 Identities=55% Similarity=0.842 Sum_probs=176.9
Q ss_pred hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC 87 (221)
Q Consensus 8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~ 87 (221)
+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||+|+|+
T Consensus 4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~ 82 (308)
T 2egu_A 4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAM 82 (308)
T ss_dssp CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHH
Confidence 57788999999999999999988899999999999999999999999999999999877766 45999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209 88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE 167 (221)
Q Consensus 88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 167 (221)
+|+.+|++|+||||++++..|++.++.+||+|+.++.+.+++++.+.+++++++. +++++++|+|+.++.+||.|++.|
T Consensus 83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~E 161 (308)
T 2egu_A 83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKE 161 (308)
T ss_dssp HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987545789999999998887 458889999999886799999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209 168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~ 219 (221)
|++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.++
T Consensus 162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~ 213 (308)
T 2egu_A 162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGG 213 (308)
T ss_dssp HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-------
T ss_pred HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCC
Confidence 9999976799999999999999999999999999999999999999887654
No 12
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=2.2e-50 Score=342.64 Aligned_cols=200 Identities=46% Similarity=0.700 Sum_probs=185.8
Q ss_pred hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209 12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA 91 (221)
Q Consensus 12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~ 91 (221)
+...+++|||+++++|+ .+||+|+|++|||||||||++.+++.+++++|.+.++ ||++|+||||.|+|++|+.
T Consensus 14 ~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa~~ 86 (303)
T 1o58_A 14 MERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAK 86 (303)
T ss_dssp HHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHHHH
T ss_pred hhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHHHHHH
Confidence 67889999999998876 5899999999999999999999999999998865544 9999999999999999999
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209 92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG 171 (221)
Q Consensus 92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q 171 (221)
+|++|+||+|++++..|++.++.+||+|+.++.+.+|+++.+.+++++++. +++|++||+|+.++.+||.|++.||++|
T Consensus 87 ~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q 165 (303)
T 1o58_A 87 RGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQ 165 (303)
T ss_dssp HTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHH
T ss_pred cCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987545889999999998887 7888999999999987999999999999
Q ss_pred hCCCCCEEEEccCchhHHHHHHHHHHhcCCC-cEEEEEeCCCCccCCCC
Q 043209 172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPE-IKVYGVEPAESAILNGG 219 (221)
Q Consensus 172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~-~kvigVe~~~s~~~~~~ 219 (221)
++..+|+||+|+|+||+++|++.++|+.+|+ +|||+|||++++.+.+|
T Consensus 166 ~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g 214 (303)
T 1o58_A 166 MDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGG 214 (303)
T ss_dssp TTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTC
T ss_pred cCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCC
Confidence 9766999999999999999999999999999 99999999999988765
No 13
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=7.6e-51 Score=351.26 Aligned_cols=208 Identities=21% Similarity=0.294 Sum_probs=188.8
Q ss_pred ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG 82 (221)
Q Consensus 3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~ 82 (221)
.++..+++++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|.... ..+||++|+||||
T Consensus 10 ~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~-~~~vv~~SsGNhg 88 (346)
T 3l6b_A 10 ADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERK-PKAVVTHSSGNHG 88 (346)
T ss_dssp HHHHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CC-CSCEEEECSSHHH
T ss_pred HHHHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccC-CCEEEEeCCCHHH
Confidence 356678999999999999999999998889999999999999999999999999999988654323 2459999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209 83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE 162 (221)
Q Consensus 83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~ 162 (221)
+|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+ ++++.+.+++++++. +.+|+++++|+.++. ||.
T Consensus 89 ~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~i~~~~np~~~~-g~~ 164 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--DESRENVAKRVTEET-EGIMVHPNQEPAVIA-GQG 164 (346)
T ss_dssp HHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSS--HHHHHHHHHHHHHHH-TCEECCSSSCHHHHH-HHH
T ss_pred HHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCChHHHH-HHH
Confidence 9999999999999999999999999999999999999999875 889999999999887 789999999999885 999
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
|++.||++|+ +.+|+||+|+|+||+++|++.++|+.+|++|||||||++++++
T Consensus 165 t~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~ 217 (346)
T 3l6b_A 165 TIALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDC 217 (346)
T ss_dssp HHHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHH
T ss_pred HHHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHH
Confidence 9999999999 5799999999999999999999999999999999999998643
No 14
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=2.2e-49 Score=350.27 Aligned_cols=209 Identities=43% Similarity=0.676 Sum_probs=188.7
Q ss_pred chhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 043209 7 AIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG 84 (221)
Q Consensus 7 ~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a 84 (221)
.+++++...+++|||+++++|++.+| ++||+|+|++|||||||||++.+++.+++++|.+.++. +||++|+||||+|
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~-tVV~aSsGN~G~A 175 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGD-TIIEPTSGNTGIG 175 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTC-EEEEECSSHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHH
Confidence 46778899999999999999988777 69999999999999999999999999999999887764 5999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhH---HHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209 85 MACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE---EFRIVEELLNKIPTSFNPHQFKNPANPKTHY 161 (221)
Q Consensus 85 lA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~ 161 (221)
+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+|++ ..+.+++++++.++.+|++||+|+.|+.+||
T Consensus 176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~ 255 (435)
T 1jbq_A 176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255 (435)
T ss_dssp HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence 9999999999999999999999999999999999999986534554 4677888888876789999999999888899
Q ss_pred hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
.+++.||++|+++++|+||+|+|+||+++|++.+||+..|++|||||||++++.+
T Consensus 256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~ 310 (435)
T 1jbq_A 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILA 310 (435)
T ss_dssp HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCS
T ss_pred HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhh
Confidence 9999999999976799999999999999999999999999999999999999754
No 15
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.4e-49 Score=345.44 Aligned_cols=200 Identities=20% Similarity=0.198 Sum_probs=185.2
Q ss_pred HHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209 10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA 89 (221)
Q Consensus 10 ~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a 89 (221)
.+....+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++| ..+||++|+||||+|+|++|
T Consensus 38 ~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g-----~~~vv~aSsGN~g~alA~aa 112 (364)
T 4h27_A 38 MSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG-----CAHFVCSSSGNAGMAAAYAA 112 (364)
T ss_dssp ---CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHHHHH
T ss_pred hhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcC-----CCEEEEeCCChHHHHHHHHH
Confidence 4456778999999999999888999999999999999999999999999999887 45699999999999999999
Q ss_pred HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209 90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW 169 (221)
Q Consensus 90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 169 (221)
+.+|++|+||||++.+..+++.++.+||+|+.++.+ ++++.+.+++++++.++++|++||+|+.+++ ||.|++.||+
T Consensus 113 ~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~l~~~~~~~~~~~~~~np~~~~-G~~t~~~Ei~ 189 (364)
T 4h27_A 113 RQLGVPATIVVPGTTPALTIERLKNEGATVKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKELK 189 (364)
T ss_dssp HHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSS--TTHHHHHHHHHHHHSTTEEEECSSCSHHHHH-HHTHHHHHHH
T ss_pred HHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhCCCeEEeCCCCCHHHHH-HHHHHHHHHH
Confidence 999999999999999999999999999999999874 8899999999999877899999999999997 8999999999
Q ss_pred HhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209 170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN 217 (221)
Q Consensus 170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~ 217 (221)
+|++..+|+||+|+|+||+++|++.++|+.+ |+++||+|||++++++.
T Consensus 190 ~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~ 238 (364)
T 4h27_A 190 ETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFH 238 (364)
T ss_dssp HHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHH
T ss_pred HHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHH
Confidence 9997679999999999999999999999886 88999999999998764
No 16
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=6.3e-49 Score=356.23 Aligned_cols=211 Identities=43% Similarity=0.652 Sum_probs=195.0
Q ss_pred ccchhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209 5 KCAIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG 82 (221)
Q Consensus 5 ~~~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~ 82 (221)
+.++++.+.+.+++|||+++++|++.+| ++||+|+|++|||||||+|++.+++.+++++|.+.+|. +||++|+||||
T Consensus 47 ~~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~-~vv~~ssGN~g 125 (527)
T 3pc3_A 47 RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGY-TIIEPTSGNTG 125 (527)
T ss_dssp CCSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTC-EEEEECSSHHH
T ss_pred hhhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHH
Confidence 4567888999999999999999988777 79999999999999999999999999999999888875 49999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHH
Q 043209 83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKT 159 (221)
Q Consensus 83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~ 159 (221)
+|+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+|+ .+.+.+++++++.++.+|++||+||.++.+
T Consensus 126 ~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~ 205 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA 205 (527)
T ss_dssp HHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHH
T ss_pred HHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHH
Confidence 99999999999999999999999999999999999999998754454 367888999988877899999999998888
Q ss_pred HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
||.+++.||++|+++.+|+||+|+|+||+++|++.++++.+|++|||||||++++.+
T Consensus 206 g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~ 262 (527)
T 3pc3_A 206 HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILA 262 (527)
T ss_dssp HHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccc
Confidence 999999999999977899999999999999999999999999999999999999754
No 17
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=2.2e-50 Score=347.96 Aligned_cols=205 Identities=25% Similarity=0.334 Sum_probs=189.0
Q ss_pred ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChH
Q 043209 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE-KGLITPGKTVLIECTSGNT 81 (221)
Q Consensus 3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~ 81 (221)
.++..+++++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.+ .+ ..+||++|+|||
T Consensus 25 ~~i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~-----~~~vv~~ssGN~ 99 (342)
T 2gn0_A 25 EDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEK-----RKGVVACSAGNH 99 (342)
T ss_dssp HHHHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHH-----HTCEEEECSSHH
T ss_pred HHHHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcC-----CCEEEEECCChH
Confidence 345678889999999999999999988888999999999999999999999999998853 33 335999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209 82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY 161 (221)
Q Consensus 82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~ 161 (221)
|.|+|++|+.+|++|+||||++.+..|++.++.+||+|+.++.+ ++++.+.+++++++. +++|++||+|+.++. ||
T Consensus 100 g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~-g~ 175 (342)
T 2gn0_A 100 AQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDN--FNDTIAKVSEIVETE-GRIFIPPYDDPKVIA-GQ 175 (342)
T ss_dssp HHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCSS--HHHHHHHHHHHHHHH-CCEECCSSSSHHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCHHHHH-HH
Confidence 99999999999999999999999999999999999999999875 899999999998886 789999999999986 99
Q ss_pred hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
.|++.||++|++ .+|+||+|+|+||+++|++.+||+.+|++|||+|||++++++.
T Consensus 176 ~t~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~ 230 (342)
T 2gn0_A 176 GTIGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMA 230 (342)
T ss_dssp HHHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHH
T ss_pred HHHHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHH
Confidence 999999999994 7999999999999999999999999999999999999987763
No 18
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=3e-50 Score=344.63 Aligned_cols=204 Identities=21% Similarity=0.284 Sum_probs=186.5
Q ss_pred ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChH
Q 043209 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE-KGLITPGKTVLIECTSGNT 81 (221)
Q Consensus 3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~ 81 (221)
+++..+++++...+++|||+++++|++..|++||+|+|++||+||||||++.+++.++.+ ++ ..+||++|+|||
T Consensus 11 ~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~-----~~~vv~~ssGN~ 85 (323)
T 1v71_A 11 DDVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR-----KAGVLTFSSGNH 85 (323)
T ss_dssp HHHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH-----HHCEEECCSSHH
T ss_pred HHHHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcC-----CCeEEEeCCCcH
Confidence 345678889999999999999999988888999999999999999999999999986543 22 345999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209 82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY 161 (221)
Q Consensus 82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~ 161 (221)
|+|+|++|+.+|++|++|||++.+..+++.++.+||+|+.++.+ ++++.+.+++++++. +++|++||+|+.++. ||
T Consensus 86 g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~~~-g~ 161 (323)
T 1v71_A 86 AQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHVLA-GQ 161 (323)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcchhh-hH
Confidence 99999999999999999999999999999999999999999886 678889999998886 688899999999986 99
Q ss_pred hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
.|++.||++|++ .+|+||+|+|||||++|++.++|+.+|++|||+|||++++++
T Consensus 162 ~t~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~ 215 (323)
T 1v71_A 162 GTAAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDG 215 (323)
T ss_dssp THHHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHH
T ss_pred hHHHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchH
Confidence 999999999995 799999999999999999999999999999999999998755
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=4.7e-50 Score=341.64 Aligned_cols=203 Identities=24% Similarity=0.274 Sum_probs=186.5
Q ss_pred ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209 3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG 82 (221)
Q Consensus 3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~ 82 (221)
+++..+++++.+.+++|||+++++|++..|++||+|+|++|||||||||++.+++.++. + ..+||++|+||||
T Consensus 5 ~~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g 77 (311)
T 1ve5_A 5 QDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHA 77 (311)
T ss_dssp HHHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHH
T ss_pred HHHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHH
Confidence 45677899999999999999999998888899999999999999999999999999876 2 3459999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209 83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE 162 (221)
Q Consensus 83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~ 162 (221)
.|+|++|+.+|++|++|||++++..|++.++.+||+|+.++.+ ++++.+.+++++++. +++|++||+|+.+++ ||.
T Consensus 78 ~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~-g~~ 153 (311)
T 1ve5_A 78 QGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLVIA-GQG 153 (311)
T ss_dssp HHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHHHH-HHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcchhh-hcc
Confidence 9999999999999999999998899999999999999999876 788999999998886 789999999999996 999
Q ss_pred hHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 163 TTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 163 t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
|++.||++|++ +++|+||+|+|+||+++|++.++|+.+|++|||+|||++++++
T Consensus 154 t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~ 210 (311)
T 1ve5_A 154 TAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDA 210 (311)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHH
Confidence 99999999995 6799999999999999999999999999999999999998765
No 20
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=3.6e-49 Score=343.65 Aligned_cols=202 Identities=19% Similarity=0.187 Sum_probs=184.9
Q ss_pred hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209 8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC 87 (221)
Q Consensus 8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~ 87 (221)
.++++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.++| ..+||++|+||||+|+|+
T Consensus 36 ~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g-----~~~vv~aSsGN~g~alA~ 110 (372)
T 1p5j_A 36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG-----CAHFVCSSAGNAGMAAAY 110 (372)
T ss_dssp ----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHHH
T ss_pred hcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcC-----CCEEEEeCCCHHHHHHHH
Confidence 344566789999999999998888899999999999999999999999999998876 456999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209 88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE 167 (221)
Q Consensus 88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 167 (221)
+|+.+|++|+||||++++..|++.++.+||+|+.++.+ ++++.+.+++++++.++++|++||+|+.+++ ||.|++.|
T Consensus 111 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~a~~~a~~l~~~~~~~~~v~~~~n~~~~~-G~~t~~~E 187 (372)
T 1p5j_A 111 AARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKE 187 (372)
T ss_dssp HHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHHSTTEEECCSSCCHHHHH-HHTHHHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhcCCcEEeCCCCCHHHHh-hHHHHHHH
Confidence 99999999999999999999999999999999999874 8999999999998866899999999999997 88999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209 168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN 217 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~ 217 (221)
|++|++..+|+||+|+|+||+++|++.+||+.+ |++|||+|||++++++.
T Consensus 188 i~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~ 238 (372)
T 1p5j_A 188 LKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFH 238 (372)
T ss_dssp HHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHH
T ss_pred HHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHH
Confidence 999996669999999999999999999999986 89999999999988764
No 21
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.9e-49 Score=335.08 Aligned_cols=194 Identities=24% Similarity=0.212 Sum_probs=181.0
Q ss_pred cccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC
Q 043209 14 ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKG 93 (221)
Q Consensus 14 ~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g 93 (221)
+.+.+|||+++++|++..|++||+|+|++|||||||||++.+++.++.++| ..+||++|+||||.|+|++|+.+|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g-----~~~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKG-----CRHLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CCEEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcC-----CCEEEEECCchHHHHHHHHHHHcC
Confidence 456899999999998888889999999999999999999999999998876 456999999999999999999999
Q ss_pred CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhC
Q 043209 94 YKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR 173 (221)
Q Consensus 94 ~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~ 173 (221)
++|++|||++.+..+++.++.+||+|+.++.+ ++++.+.+++++++. +++|++|++|+.+++ ||.|++.||++|++
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~-g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGKV--WDEANLRAQELAKRD-GWENVPPFDHPLIWK-GHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCSS--HHHHHHHHHHHHHST-TEEECCSSCSHHHHH-HHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCChhhcc-chhHHHHHHHHhcC
Confidence 99999999999999999999999999999875 899999999998886 899999999999997 88999999999997
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAIL 216 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~ 216 (221)
..+|+||+|+|+||+++|++.+|++.+ |++|||+|||++++++
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~ 197 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCF 197 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHH
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHH
Confidence 679999999999999999999999986 8899999999998765
No 22
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=2.8e-48 Score=335.90 Aligned_cols=199 Identities=24% Similarity=0.271 Sum_probs=183.8
Q ss_pred hHHhhcccCCCceeec--ccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209 9 ANDITELIGNTPMVYL--NNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA 86 (221)
Q Consensus 9 ~~~~~~~~~~TPl~~~--~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA 86 (221)
.+++.+.+++|||+++ ++|++..|++||+|+|++|||||||||++.+++.++.++| ..+||++|+||||.|+|
T Consensus 19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g-----~~~vv~~SsGN~g~alA 93 (351)
T 3aey_A 19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGG-----AQAVACASTGNTAASAA 93 (351)
T ss_dssp SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CSEEEESCSSHHHHHHH
T ss_pred CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcC-----CCEEEEeCCCHHHHHHH
Confidence 3568899999999999 8998888999999999999999999999999999999887 45699999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209 87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG 165 (221)
Q Consensus 87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 165 (221)
++|+.+|++|++|+|++ .+..|+++++.+||+|+.++.+ ++++.+.+++++++. +.+|+++ +|+.+++ ||.|++
T Consensus 94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~~-g~~t~~ 168 (351)
T 3aey_A 94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALVNS-VNPHRLE-GQKTLA 168 (351)
T ss_dssp HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SEEECST-TCHHHHH-HHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCC-CCcccee-eeeeHH
Confidence 99999999999999998 9999999999999999999985 899999999999887 5888987 8999986 999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN 217 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~ 217 (221)
.||++|++..+|+||+|+|+||+++|++.+|++.+| .+|||+|||++++++.
T Consensus 169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~ 226 (351)
T 3aey_A 169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLV 226 (351)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHH
T ss_pred HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhh
Confidence 999999976699999999999999999999998754 7999999999987654
No 23
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-48 Score=337.82 Aligned_cols=201 Identities=22% Similarity=0.284 Sum_probs=184.5
Q ss_pred hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209 9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF 88 (221)
Q Consensus 9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~ 88 (221)
.+++.+.+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++| ..+||++|+||||.|+|++
T Consensus 29 ~~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g-----~~~vv~aSsGN~g~alA~~ 103 (360)
T 2d1f_A 29 WTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHG-----QRAVLCASTGNTSASAAAY 103 (360)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CSEEEECCSSHHHHHHHHH
T ss_pred CCccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCC-----CCEEEEeCCcHHHHHHHHH
Confidence 35678899999999999998888899999999999999999999999999999887 4569999999999999999
Q ss_pred HHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209 89 AAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE 167 (221)
Q Consensus 89 a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 167 (221)
|+.+|++|+||+|++ .+..|+++++.+||+|+.++.+ ++++.+.+++++++.++.+|+++ +|+.+++ ||.|++.|
T Consensus 104 a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~~~~~~i~~-~n~~~~~-g~~t~~~E 179 (360)
T 2d1f_A 104 AARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGN--FDDCLELARKMAADFPTISLVNS-VNPVRIE-GQKTAAFE 179 (360)
T ss_dssp HHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSC--HHHHHHHHHHHHHHCTTEEECST-TCHHHHH-HHTHHHHH
T ss_pred HHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCeEEcCC-CChhhhh-hHHHHHHH
Confidence 999999999999998 9999999999999999999985 89999999999988855888887 8999986 99999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCCC
Q 043209 168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILNG 218 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~~ 218 (221)
|++|++..+|+||+|+|+||+++|++.+|++.++ .+|||+|||++++++..
T Consensus 180 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~ 236 (360)
T 2d1f_A 180 IVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVL 236 (360)
T ss_dssp HHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHH
T ss_pred HHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhc
Confidence 9999976699999999999999999999998753 69999999999876643
No 24
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=3.3e-48 Score=335.56 Aligned_cols=199 Identities=23% Similarity=0.286 Sum_probs=183.5
Q ss_pred hHHhhcccCCCceeecccccCCCCCe--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209 9 ANDITELIGNTPMVYLNNIVDGCKAR--IAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA 86 (221)
Q Consensus 9 ~~~~~~~~~~TPl~~~~~l~~~~g~~--i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA 86 (221)
.+++.+.+++|||+++++|++..|++ ||+|+|++|||||||||++.+++.++.++| ..+||++|+||||.|+|
T Consensus 21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g-----~~~vv~~SsGN~g~alA 95 (352)
T 2zsj_A 21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAG-----KRAVICASTGNTSASAA 95 (352)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHH
T ss_pred CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcC-----CCEEEEeCCchHHHHHH
Confidence 45688999999999999998878888 999999999999999999999999999888 45699999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209 87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG 165 (221)
Q Consensus 87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 165 (221)
++|+.+|++|++|+|++ .+..|++.++.+||+|+.++.+ ++++.+.+++++++. +.+|+++ +|+.+++ ||.|++
T Consensus 96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~~-g~~t~~ 170 (352)
T 2zsj_A 96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGT--FDDALNIVRKIGENF-PVEIVNS-VNPYRIE-GQKTAA 170 (352)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHHS-SEEECST-TCTHHHH-HHTHHH
T ss_pred HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CcEECCC-CCcchhh-hHhHHH
Confidence 99999999999999997 9999999999999999999985 899999999999887 5888887 8999986 999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN 217 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~ 217 (221)
.||++|++..+|+||+|+|+||+++|++.+|++.++ .+|||+|||++++++.
T Consensus 171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~ 228 (352)
T 2zsj_A 171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIV 228 (352)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHH
T ss_pred HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHh
Confidence 999999976699999999999999999999998754 6999999999987654
No 25
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=2.5e-48 Score=348.38 Aligned_cols=198 Identities=26% Similarity=0.316 Sum_probs=184.1
Q ss_pred HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209 11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA 90 (221)
Q Consensus 11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~ 90 (221)
++...+++|||+++++|++..|++||+|+|++|||||||||++.+++..+.+++. ..+||++|+||||.++|++|+
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~ 99 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA 99 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence 5778899999999999998899999999999999999999999999998765432 345999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209 91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE 170 (221)
Q Consensus 91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 170 (221)
++|++|+||||.+++..|++.++.+||+|+.++.+ |+++.+.+++++++. +++|++||+|+.++. |+.|++.||++
T Consensus 100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~~--~dda~~~a~ela~e~-g~~~v~pfdnp~~ia-GqgTig~EI~e 175 (514)
T 1tdj_A 100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMVIA-GQGTLALELLQ 175 (514)
T ss_dssp HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHHHH-HHHHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEeeCCCCCHHHHH-HHHHHHHHHHH
Confidence 99999999999999999999999999999999864 999999999999887 789999999999985 99999999999
Q ss_pred hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
|++. +|+||+|+|+||+++|++.++|+.+|++|||||||+++++|.
T Consensus 176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~ 221 (514)
T 1tdj_A 176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLK 221 (514)
T ss_dssp HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHH
T ss_pred HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHH
Confidence 9954 999999999999999999999999999999999999988775
No 26
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=3.8e-48 Score=336.73 Aligned_cols=198 Identities=24% Similarity=0.300 Sum_probs=182.8
Q ss_pred HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209 11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA 90 (221)
Q Consensus 11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~ 90 (221)
++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.+++. ..+||++|+||||+|+|++|+
T Consensus 53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~ 128 (366)
T 3iau_A 53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQ 128 (366)
T ss_dssp CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHH
T ss_pred HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHH
Confidence 4678889999999999998889999999999999999999999999987643321 345999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209 91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE 170 (221)
Q Consensus 91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 170 (221)
++|++|++|+|++.+..++++++.+||+|+.++. +|+++++.+++++++. +++|+++|+|+.++. ||.|++.||++
T Consensus 129 ~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~i~-g~~t~~~Ei~~ 204 (366)
T 3iau_A 129 RLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGVIK-GQGTIGTEINR 204 (366)
T ss_dssp HTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHHHH-HHHHHHHHHHH
T ss_pred HhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHHHH-HHHHHHHHHHH
Confidence 9999999999999999999999999999999986 4999999999999887 899999999999885 99999999999
Q ss_pred hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
|+ +.+|+||+|+|+||+++|++.++|+.+|++||++|||.+++++.
T Consensus 205 q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~ 250 (366)
T 3iau_A 205 QL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMT 250 (366)
T ss_dssp HC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHH
T ss_pred hc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHH
Confidence 99 78999999999999999999999999999999999999987664
No 27
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=3.9e-47 Score=325.54 Aligned_cols=205 Identities=22% Similarity=0.198 Sum_probs=184.3
Q ss_pred chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChHH
Q 043209 7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEP--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGNTG 82 (221)
Q Consensus 7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN~~ 82 (221)
+.++++.+.+++|||+++++|++..|++||+|+|++|| +||||||.+.+++.+++++|. .+||++ |+||||
T Consensus 10 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~g 84 (325)
T 1j0a_A 10 AKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNHA 84 (325)
T ss_dssp TTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHHH
T ss_pred ccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHH
Confidence 46678899999999999999988788999999999999 999999999999999999984 458886 999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHhhCCCee-ecCCCCCCccH
Q 043209 83 IGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAEMGI---DEEFRIVEELLNKIPTSF-NPHQFKNPANP 157 (221)
Q Consensus 83 ~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~n~~~~ 157 (221)
+|+|++|+.+|++|++|||++. +..|++.++.+||+|+.++...+. +++.+.+++++++.+..| +..+++|+.++
T Consensus 85 ~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~ 164 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGT 164 (325)
T ss_dssp HHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHH
T ss_pred HHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHHH
Confidence 9999999999999999999999 999999999999999999986332 267888889988774433 45677899888
Q ss_pred HHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 158 KTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 158 ~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
+ ||.|++.||++|++..+|+||+|+|||||++|++.++++.+|++|||||||++++.+.
T Consensus 165 ~-g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~ 223 (325)
T 1j0a_A 165 L-GYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVM 223 (325)
T ss_dssp T-HHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSH
T ss_pred H-HHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 6 8999999999999768999999999999999999999999999999999999998764
No 28
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=2.1e-47 Score=329.13 Aligned_cols=205 Identities=17% Similarity=0.134 Sum_probs=182.5
Q ss_pred chhHHhhcccCCCceeecccccCCC-C-CeEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 043209 7 AIANDITELIGNTPMVYLNNIVDGC-K-ARIAAKLEMME-P--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIE--CTSG 79 (221)
Q Consensus 7 ~~~~~~~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~--assG 79 (221)
+.++++...+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG 78 (341)
T 1f2d_A 4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS 78 (341)
T ss_dssp TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence 3466788999999999999998887 7 89999999998 9 999999999999999998884 46999 9999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCC-----H------HHHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHhhCCCe
Q 043209 80 NTGIGMACFAAAKGYKLILVMPAFMS-----L------EKRIILQAYGAQLILTNAEMGI---DEEFRIVEELLNKIPTS 145 (221)
Q Consensus 80 N~~~alA~~a~~~g~~~~ivvp~~~~-----~------~~~~~l~~~Ga~V~~v~~~~~~---~~~~~~a~~~~~~~~~~ 145 (221)
|||+|+|++|+.+|++|++|||.+.+ . .|++.++.+||+|+.++...+. +++.+.+++++++.+..
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 158 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP 158 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999877 3 3999999999999999876322 36778888888886434
Q ss_pred e-ecCC-CCCCccHHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 146 F-NPHQ-FKNPANPKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 146 ~-~~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
+ ++++ |+||.+++ ||.|++.||++|++ ..+|+||+|+|||||++|++.+|++.+|++|||||||++++.+.
T Consensus 159 ~~i~~~~~~np~~~~-G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~ 234 (341)
T 1f2d_A 159 YPIPAGCSEHKYGGL-GFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT 234 (341)
T ss_dssp EEECGGGTTSTTTTT-HHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHH
T ss_pred EEeCCCcCCCCccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 4 4578 99999997 89999999999995 47999999999999999999999999999999999999997653
No 29
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=2.1e-46 Score=323.02 Aligned_cols=207 Identities=18% Similarity=0.196 Sum_probs=179.8
Q ss_pred ccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCh
Q 043209 5 KCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEP--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECT--SGN 80 (221)
Q Consensus 5 ~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~as--sGN 80 (221)
....++++...+++|||+++++|++.+|++||+|+|++|| +||||+|++.+++.+++++|. ++||++| +||
T Consensus 19 ~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN 93 (342)
T 4d9b_A 19 HLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSN 93 (342)
T ss_dssp GGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCH
T ss_pred hhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccH
Confidence 4567788999999999999999988888999999999999 999999999999999999884 5588886 799
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEEEEeCCCCChhHHH-HHHHHHHhhCCCeeec-CC
Q 043209 81 TGIGMACFAAAKGYKLILVMPAFMSL--------EKRIILQAYGAQLILTNAEMGIDEEF-RIVEELLNKIPTSFNP-HQ 150 (221)
Q Consensus 81 ~~~alA~~a~~~g~~~~ivvp~~~~~--------~~~~~l~~~Ga~V~~v~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~ 150 (221)
||+|+|++|+.+|++|++|||++.+. .|++.++.+||+|+.++...+++++. +.++++.++.+..|++ .+
T Consensus 94 ~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~ 173 (342)
T 4d9b_A 94 HVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVG 173 (342)
T ss_dssp HHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence 99999999999999999999998763 58999999999999998864455555 4567777766334433 45
Q ss_pred CCCCccHHHHHhhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209 151 FKNPANPKTHYETTGPEIWEGTR--GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217 (221)
Q Consensus 151 ~~n~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~ 217 (221)
+.|+.+++ ||.|++.||++|++ ..+|+||+|+|||||++|++.++|+.+|++|||||||++++.+.
T Consensus 174 ~~n~~~~~-G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~ 241 (342)
T 4d9b_A 174 GSSALGAM-GYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQ 241 (342)
T ss_dssp GCSHHHHH-HHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHH
T ss_pred CCChHHHH-HHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHH
Confidence 56777764 99999999999996 47999999999999999999999999999999999999997653
No 30
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=4.5e-46 Score=330.58 Aligned_cols=201 Identities=19% Similarity=0.207 Sum_probs=179.9
Q ss_pred hcccCCCceeeccccc----CCC----CCeEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC--------
Q 043209 13 TELIGNTPMVYLNNIV----DGC----KARIAAKLEMMEP-CSSVKDRIAFSMIKD-----AEEKGLITPGK-------- 70 (221)
Q Consensus 13 ~~~~~~TPl~~~~~l~----~~~----g~~i~~K~E~~~p-tGs~K~R~a~~~~~~-----a~~~g~~~~g~-------- 70 (221)
+.++++|||+++++|+ +.+ +++||+|+|++|| |||||+|++.+++.. ++++|.+.+|.
T Consensus 73 ~~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~ 152 (442)
T 3ss7_X 73 TGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSP 152 (442)
T ss_dssp GTTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSH
T ss_pred cCCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhh
Confidence 3456799999999876 554 4799999999999 999999999999986 78899887765
Q ss_pred --------eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 71 --------TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 71 --------~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
.+|+++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+.++.+ |+++.+.+++++++.
T Consensus 153 ~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~--~~~a~~~a~~~a~~~ 230 (442)
T 3ss7_X 153 EFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQD--YGVAVEEGRKAAQSD 230 (442)
T ss_dssp HHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHTC
T ss_pred hhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhC
Confidence 4799999999999999999999999999999999999999999999999999985 999999999999887
Q ss_pred CCeeecCCCCCCccHHHHHhhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCC
Q 043209 143 PTSFNPHQFKNPANPKTHYETTGPEIWEGTRG--------QVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAES 213 (221)
Q Consensus 143 ~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s 213 (221)
++++|++++ |+.++..||.|++.||++|++. .||+||+|+|+||+++|++.+||+. +|++|||||||+++
T Consensus 231 ~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~ 309 (442)
T 3ss7_X 231 PNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHS 309 (442)
T ss_dssp TTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTC
T ss_pred CCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCc
Confidence 678999885 5555556999999999999842 2569999999999999999999997 89999999999999
Q ss_pred ccC
Q 043209 214 AIL 216 (221)
Q Consensus 214 ~~~ 216 (221)
+++
T Consensus 310 ~~~ 312 (442)
T 3ss7_X 310 PCM 312 (442)
T ss_dssp CHH
T ss_pred hHH
Confidence 875
No 31
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.9e-45 Score=321.22 Aligned_cols=196 Identities=26% Similarity=0.340 Sum_probs=176.9
Q ss_pred CCCceeecccccCCCCCeEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe
Q 043209 17 GNTPMVYLNNIVDGCKARIAAKLEMMEP-CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYK 95 (221)
Q Consensus 17 ~~TPl~~~~~l~~~~g~~i~~K~E~~~p-tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~ 95 (221)
.+|||+++++|++. |++||+|+|++|| |||||+|++.+++..+. +.+.++ .+|+++|+||||.|+|++|+++|++
T Consensus 95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~ 170 (389)
T 1wkv_A 95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYR 170 (389)
T ss_dssp CSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred CCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCe
Confidence 57999999999876 8899999999999 99999999999999854 333345 5699999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHHHHcCCEEE-EeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhC-
Q 043209 96 LILVMPAFMSLEKRIILQAYGAQLI-LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR- 173 (221)
Q Consensus 96 ~~ivvp~~~~~~~~~~l~~~Ga~V~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~- 173 (221)
|+||||+.++..++..++.+||+|+ .++.. +++++++.+++++++. +.+|++||+|+.++.+||.+++.||++|+.
T Consensus 171 ~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~~-~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~ 248 (389)
T 1wkv_A 171 ARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP-STVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRR 248 (389)
T ss_dssp EEEEEETTSCHHHHHHHHHTTCEEEEETTCS-SSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHcCCEEEEEcCCC-CHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 77732 5889999999988775 789999999999988899999999999994
Q ss_pred --CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209 174 --GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG 218 (221)
Q Consensus 174 --~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~ 218 (221)
..||+||+|+|+||+++|++.+|++.+|++|||||||++++++.|
T Consensus 249 ~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~G 295 (389)
T 1wkv_A 249 GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG 295 (389)
T ss_dssp TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTT
T ss_pred cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCcccc
Confidence 369999999999999999999999999999999999999877653
No 32
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=6.9e-46 Score=325.74 Aligned_cols=201 Identities=20% Similarity=0.203 Sum_probs=176.8
Q ss_pred cccCCCceeecccccCCCC-CeEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 043209 14 ELIGNTPMVYLNNIVDGCK-ARIAAKLEMME-PCSSVKDRIAFSMIKDAE--EKGL----IT-------PGKT-VLIECT 77 (221)
Q Consensus 14 ~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~-ptGs~K~R~a~~~~~~a~--~~g~----~~-------~g~~-~vv~as 77 (221)
..+++|||+++++|++.+| .+||+|+|++| |+||||||++.+++.++. +.|. +. .+.+ +||++|
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS 119 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT 119 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence 4678999999999998888 59999999999 999999999999999884 2231 00 1134 699999
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCC-----CC
Q 043209 78 SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQ-----FK 152 (221)
Q Consensus 78 sGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~ 152 (221)
+||||+|+|++|+.+|++|+||||++++..+++.++.+||+|+.++.+ |+++.+.+++++++. +++|+++ |+
T Consensus 120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~ 196 (398)
T 4d9i_A 120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMN--YDDTVRLTMQHAQQH-GWEVVQDTAWEGYT 196 (398)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSC--HHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence 999999999999999999999999999999999999999999999985 899999999999887 8899986 65
Q ss_pred -CCccHHHHHhhHHHHHHHhhCCC---CCEEEEccCchhHHHHHHHHHHhc--CCCcEEEEEeCCCCccCC
Q 043209 153 -NPANPKTHYETTGPEIWEGTRGQ---VDIFVSGIGTGGTVSGVGNFLKKK--NPEIKVYGVEPAESAILN 217 (221)
Q Consensus 153 -n~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~p~G~Gg~~~Gi~~~~~~~--~~~~kvigVe~~~s~~~~ 217 (221)
|+.+...||.|++.||++|++.. ||+||+|+|+||+++|++.++++. .|++|||+|||++++++.
T Consensus 197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~ 267 (398)
T 4d9i_A 197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIY 267 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHH
T ss_pred CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHH
Confidence 34555569999999999999544 999999999999999999999876 478999999999998875
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=1.6e-45 Score=316.87 Aligned_cols=202 Identities=19% Similarity=0.166 Sum_probs=176.1
Q ss_pred chhHHhhcccCCCceeecccccCCC-C-CeEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 043209 7 AIANDITELIGNTPMVYLNNIVDGC-K-ARIAAKLEMME-P--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIE--CTSG 79 (221)
Q Consensus 7 ~~~~~~~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~--assG 79 (221)
..++++...+++|||+++++|++.+ | .+||+|+|++| | +||||||++.+++.+++++|. .+||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~GassG 78 (338)
T 1tzj_A 4 QRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQS 78 (338)
T ss_dssp GGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETTC
T ss_pred ccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCchh
Confidence 4567789999999999999998877 7 89999999997 8 999999999999999998884 45888 7999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEEEeCCCCChhH-----HHHHHHHHHhhCCCee
Q 043209 80 NTGIGMACFAAAKGYKLILVMPAFMSLE--------KRIILQAYGAQLILTNAEMGIDE-----EFRIVEELLNKIPTSF 146 (221)
Q Consensus 80 N~~~alA~~a~~~g~~~~ivvp~~~~~~--------~~~~l~~~Ga~V~~v~~~~~~~~-----~~~~a~~~~~~~~~~~ 146 (221)
|||+|+|++|+.+|++|++|||++.+.. |++.++.+||+|+.++.+ +++ +.+.+++++++.+..+
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~~~~~~a~~l~~~~~~~~ 156 (338)
T 1tzj_A 79 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG--FDIGFRRSWEDALESVRAAGGKPY 156 (338)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc--chhhHHHHHHHHHHHHHhcCCceE
Confidence 9999999999999999999999987654 999999999999999875 333 4777888888764445
Q ss_pred e-cCC-CCCCccHHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCccCC
Q 043209 147 N-PHQ-FKNPANPKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAILN 217 (221)
Q Consensus 147 ~-~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~~~~ 217 (221)
+ .++ ++|+.+++ ||.+++.||++|++ ..+|+||+|+|||||++|++.+|++. +|+ |||+|||++++.+.
T Consensus 157 ~~p~~~~~n~~~~~-g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~ 231 (338)
T 1tzj_A 157 AIPAGCSDHPLGGL-GFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQT 231 (338)
T ss_dssp ECCGGGTSSTTTTT-HHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHH
T ss_pred EeCCCcCCCcccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHH
Confidence 4 456 89999997 89999999999995 47999999999999999999999998 888 99999999987653
No 34
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=8e-43 Score=312.76 Aligned_cols=198 Identities=15% Similarity=0.169 Sum_probs=176.6
Q ss_pred hhcccCCCceeecccccCC-CC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCChHHHHHH
Q 043209 12 ITELIGNTPMVYLNNIVDG-CK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEE---KGLITPGKTVLIECTSGNTGIGMA 86 (221)
Q Consensus 12 ~~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~---~g~~~~g~~~vv~assGN~~~alA 86 (221)
+...+++|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+ ++ .+..+||++|+||||.|+|
T Consensus 124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~---~g~~~Vv~aSsGNtG~AlA 200 (486)
T 1e5x_A 124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMK---RPVVGVGCASTGDTSAALS 200 (486)
T ss_dssp CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTT---CCCCEEEECCCSHHHHHHH
T ss_pred ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCCCHHHHHHH
Confidence 3556889999999999887 77 489999999999999999999888876554 33 1245699999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209 87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG 165 (221)
Q Consensus 87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 165 (221)
++|+++|++|+||+|.+ ++..|+++++.+||+|+.++++ |+++.+.+++++++. ++++++++ |+.+++ ||.|++
T Consensus 201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~--~dd~~~~a~~l~~~~-~~~~vns~-N~~~i~-gq~t~~ 275 (486)
T 1e5x_A 201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-PIYLANSL-NSLRLE-GQKTAA 275 (486)
T ss_dssp HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-CEEEGGGS-HHHHHH-HHTHHH
T ss_pred HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CEEEeCCC-CHHHHH-HHHHHH
Confidence 99999999999999996 9999999999999999999986 999999999999887 78889887 899997 899999
Q ss_pred HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccCC
Q 043209 166 PEIWEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAILN 217 (221)
Q Consensus 166 ~Ei~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~~ 217 (221)
+||++|+++ .+|+||+|+|+||+++|++.+|++.. |.+|||+|||++++++.
T Consensus 276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~ 334 (486)
T 1e5x_A 276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLY 334 (486)
T ss_dssp HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHH
T ss_pred HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHH
Confidence 999999965 58999999999999999999998864 78999999999987764
No 35
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=9.5e-43 Score=307.46 Aligned_cols=197 Identities=18% Similarity=0.197 Sum_probs=164.1
Q ss_pred cccC-CCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209 14 ELIG-NTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA 91 (221)
Q Consensus 14 ~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~ 91 (221)
..++ +|||+++++|++.+ +++||+|+|++|||||||+|++.+++..+.++|. ...|+++|+||||.|+|++|+.
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~ 147 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL 147 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence 4564 59999999998887 5899999999999999999999999998888874 3445568999999999999999
Q ss_pred cCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCCCc----cHHHHH
Q 043209 92 KGYKLILVMPAFM---SLEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKNPA----NPKTHY 161 (221)
Q Consensus 92 ~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~----~~~~g~ 161 (221)
+|++|+||||... ...|+..++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+. ++..||
T Consensus 148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq 227 (418)
T 1x1q_A 148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ 227 (418)
T ss_dssp HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence 9999999999852 23678899999999999984 3368888887754 4665445555 45554432 233499
Q ss_pred hhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCc
Q 043209 162 ETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESA 214 (221)
Q Consensus 162 ~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~ 214 (221)
.|++.||++|+. ..+|+||+|+|+||+++|++.+||+. +|++|||||||++++
T Consensus 228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~ 285 (418)
T 1x1q_A 228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEG 285 (418)
T ss_dssp THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcc
Confidence 999999999983 35999999999999999999999987 899999999999984
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=3.4e-42 Score=301.36 Aligned_cols=198 Identities=19% Similarity=0.218 Sum_probs=164.8
Q ss_pred hhcccCC-CceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209 12 ITELIGN-TPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA 89 (221)
Q Consensus 12 ~~~~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a 89 (221)
+...+++ |||+++++|++.+| ++||+|+|++|||||||||++.+++..++++|. ...|+++|+||||+|+|++|
T Consensus 43 ~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~----~~vv~~~ssGN~g~a~A~aa 118 (388)
T 1v8z_A 43 LKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TRLIAETGAGQHGVATAMAG 118 (388)
T ss_dssp HHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHH
T ss_pred HHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHH
Confidence 3457765 99999999988876 899999999999999999999999999888874 34344589999999999999
Q ss_pred HHcCCeEEEEecCC-C--CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCCCc----cHHH
Q 043209 90 AAKGYKLILVMPAF-M--SLEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKNPA----NPKT 159 (221)
Q Consensus 90 ~~~g~~~~ivvp~~-~--~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~----~~~~ 159 (221)
+.+|++|+||||+. . ...|++.++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+. ++..
T Consensus 119 ~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~ 198 (388)
T 1v8z_A 119 ALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRD 198 (388)
T ss_dssp HHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHH
T ss_pred HHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHH
Confidence 99999999999974 2 24668899999999999985 3358888888854 5666545444 56665543 2344
Q ss_pred HHhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209 160 HYETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214 (221)
Q Consensus 160 g~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~ 214 (221)
||.|++.||++|+ +..+|+||+|+|+||+++|++.+++. +|++|||||||++++
T Consensus 199 ~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~ 256 (388)
T 1v8z_A 199 FQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKG 256 (388)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETB
T ss_pred HhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccc
Confidence 8999999999999 44699999999999999999999884 899999999999864
No 37
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=2.7e-42 Score=302.77 Aligned_cols=196 Identities=17% Similarity=0.184 Sum_probs=164.4
Q ss_pred hcccCC-CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHHHHH
Q 043209 13 TELIGN-TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE-CTSGNTGIGMACFAA 90 (221)
Q Consensus 13 ~~~~~~-TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~-assGN~~~alA~~a~ 90 (221)
...+++ |||+++++|++.+|++||+|+|++|||||||+|++.+++..++++|. . .+|+ +|+||||.|+|++|+
T Consensus 49 ~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~----~-~vi~e~ssGNhg~a~A~aa~ 123 (396)
T 1qop_B 49 KNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----S-EIIAETGAGQHGVASALASA 123 (396)
T ss_dssp HHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----C-EEEEEESSSHHHHHHHHHHH
T ss_pred HHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc----C-EEEEecCchHHHHHHHHHHH
Confidence 356765 99999999999899999999999999999999999999999988884 3 4665 899999999999999
Q ss_pred HcCCeEEEEecCC-CCH--HHHHHHHHcCCEEEEeCC-CCChhHHHHHHHHH-HhhCCCeee-cCCCCCCc----cHHHH
Q 043209 91 AKGYKLILVMPAF-MSL--EKRIILQAYGAQLILTNA-EMGIDEEFRIVEEL-LNKIPTSFN-PHQFKNPA----NPKTH 160 (221)
Q Consensus 91 ~~g~~~~ivvp~~-~~~--~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~n~~----~~~~g 160 (221)
++|++|+||||+. .+. .|++.++.+||+|+.++. ..+++++.+.+.+. +++.++.+| ++++.|+. ++..|
T Consensus 124 ~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g 203 (396)
T 1qop_B 124 LLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREF 203 (396)
T ss_dssp HHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHT
T ss_pred HCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHH
Confidence 9999999999985 333 457889999999999985 44588888888764 565445544 45554432 33448
Q ss_pred HhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209 161 YETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214 (221)
Q Consensus 161 ~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~ 214 (221)
|.|++.||++|+ +..+|+||+|+|+||+++|++.+++ .+|++|||||||++++
T Consensus 204 ~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~ 260 (396)
T 1qop_B 204 QRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHG 260 (396)
T ss_dssp TTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETB
T ss_pred HhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCcc
Confidence 999999999999 5579999999999999999999998 4899999999999874
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=3.3e-41 Score=297.74 Aligned_cols=196 Identities=17% Similarity=0.208 Sum_probs=161.6
Q ss_pred hcccCC-CceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209 13 TELIGN-TPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA 90 (221)
Q Consensus 13 ~~~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~ 90 (221)
...+++ |||+++++|++.+| .+||+|+|++|||||||+|++.+++..++++|. ...|+++|+||||.|+|++|+
T Consensus 75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa 150 (422)
T 2o2e_A 75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA 150 (422)
T ss_dssp TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence 345554 99999999999884 899999999999999999999999999888874 444667999999999999999
Q ss_pred HcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCC--Cc--cHHHH
Q 043209 91 AKGYKLILVMPAFMS---LEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKN--PA--NPKTH 160 (221)
Q Consensus 91 ~~g~~~~ivvp~~~~---~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n--~~--~~~~g 160 (221)
++|++|+||||.... ..|+.+++.+||+|+.++. +.+++++.+.+.+ ++++.++.+| ++++.| |. ++..|
T Consensus 151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~ 230 (422)
T 2o2e_A 151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF 230 (422)
T ss_dssp HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence 999999999998522 4577899999999999985 3468889888754 5666445555 455443 22 34458
Q ss_pred HhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209 161 YETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES 213 (221)
Q Consensus 161 ~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s 213 (221)
|.+++.||.+|+ +..||+||+|+|+||+++|++.+++. .|.+|||||||+++
T Consensus 231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~ 286 (422)
T 2o2e_A 231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGD 286 (422)
T ss_dssp TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC-
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCC
Confidence 999999999998 34599999999999999999888864 78999999999997
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-35 Score=262.35 Aligned_cols=179 Identities=14% Similarity=0.119 Sum_probs=152.6
Q ss_pred CCCceeecccccCCCCCeEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCChHHHHHH-HHHHH
Q 043209 17 GNTPMVYLNNIVDGCKARIAAKLEMM-EPCSSVKDRIAFSMI---KDAEEKGLITPGKTVLIECTSGNTGIGMA-CFAAA 91 (221)
Q Consensus 17 ~~TPl~~~~~l~~~~g~~i~~K~E~~-~ptGs~K~R~a~~~~---~~a~~~g~~~~g~~~vv~assGN~~~alA-~~a~~ 91 (221)
++|||+++++ +||+ +|++ |||||||||++.+++ .++ +++. ..+|+++|+||||.|+| .+|+.
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~~ 148 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYGL 148 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTTC
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhhh
Confidence 7899999863 6999 7888 699999999999885 444 2232 56799999999999999 59999
Q ss_pred cCCeEEEEecC-CCCHHHHHHHHHcCCEE--EEeCCCCChhHHHHHHHHHHhh-----CCCeeecCCCCCCccHHHHHhh
Q 043209 92 KGYKLILVMPA-FMSLEKRIILQAYGAQL--ILTNAEMGIDEEFRIVEELLNK-----IPTSFNPHQFKNPANPKTHYET 163 (221)
Q Consensus 92 ~g~~~~ivvp~-~~~~~~~~~l~~~Ga~V--~~v~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~n~~~~~~g~~t 163 (221)
+|++|+||+|+ +++..++++|+.+||+| +.+++ +++++.+.+++++++ ..+++++++ .|+.++. ||.+
T Consensus 149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~-~n~~~~~-gq~t 224 (428)
T 1vb3_A 149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANS-INISRLL-AQIC 224 (428)
T ss_dssp TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCST-TSHHHHH-HTTH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCC-CCHHHHH-HHHH
Confidence 99999999999 59999999999999999 56665 499999999888753 125666766 4788876 8999
Q ss_pred HHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209 164 TGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE 212 (221)
Q Consensus 164 ~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~ 212 (221)
++.||++|+.. .+|+||+|+|+||+++|++.+++...|.+|||+|++++
T Consensus 225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~ 276 (428)
T 1vb3_A 225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN 276 (428)
T ss_dssp HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSC
T ss_pred HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCC
Confidence 99999999964 59999999999999999999998877888999999886
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=3.7e-33 Score=250.75 Aligned_cols=190 Identities=16% Similarity=0.046 Sum_probs=148.4
Q ss_pred ccCCCceee--cccccCCCCCeEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEeeCCChHHH
Q 043209 15 LIGNTPMVY--LNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI---KDAE-EKGL-----ITPGKTVLIECTSGNTGI 83 (221)
Q Consensus 15 ~~~~TPl~~--~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~---~~a~-~~g~-----~~~g~~~vv~assGN~~~ 83 (221)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++ .+++ ++|. +.+ ..+||++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~-~~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKK-QITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCC-CEEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCC-CCEEEECCCCcHHH
Confidence 477899999 7655 4799999999999999999999994 4443 3441 333 35699999999999
Q ss_pred HHHHHH--HHcCCeEEEEecCC-CCHHHHHHHH---HcCCEEEEeCCCCChhHHHHHHHHHHhhCC-----CeeecCCCC
Q 043209 84 GMACFA--AAKGYKLILVMPAF-MSLEKRIILQ---AYGAQLILTNAEMGIDEEFRIVEELLNKIP-----TSFNPHQFK 152 (221)
Q Consensus 84 alA~~a--~~~g~~~~ivvp~~-~~~~~~~~l~---~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~ 152 (221)
| |.+| +..|++++||+|++ ++..++.++. ..|++|+.+++ +|+++++.+++++++.+ +.++.++.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~- 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNVGAVNSI- 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCBCCCCSC-
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhcccccccceeEeeCCC-
Confidence 9 5555 78899999999997 8888777773 44556666666 49999999999988752 23333332
Q ss_pred CCccHHHHHhhHHHHHHHhh-C---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 153 NPANPKTHYETTGPEIWEGT-R---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 153 n~~~~~~g~~t~~~Ei~~q~-~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
|+..++ |+.+.+.|+++|+ + +.+|+||+|+|+||++.|++.+.+.-.|.+|+|+|||++ +++
T Consensus 243 N~~ri~-gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n-~~l 308 (514)
T 1kl7_A 243 NWARIL-AQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN-DIL 308 (514)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC-CHH
T ss_pred CHhHHh-hHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCc-chH
Confidence 555554 9999999999998 4 358999999999999999887554445888999999998 444
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=4.8e-33 Score=247.27 Aligned_cols=182 Identities=15% Similarity=0.133 Sum_probs=150.9
Q ss_pred CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHH-HHHHHHHHc
Q 043209 18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSM---IKDAE-EKGLITPGKTVLIECTSGNTGI-GMACFAAAK 92 (221)
Q Consensus 18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~assGN~~~-alA~~a~~~ 92 (221)
-|||+++.. ++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||. +++++|+++
T Consensus 93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~ 161 (468)
T 4f4f_A 93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD 161 (468)
T ss_dssp SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence 389998642 69999999999999999999999 66664 5553 35799999999995 556778889
Q ss_pred CCeEEEEecCC-CCHHHHHHHHHcC-CEE--EEeCCCCChhHHHHHHHHHHhhCC-----CeeecCCCCCCccHHHHHhh
Q 043209 93 GYKLILVMPAF-MSLEKRIILQAYG-AQL--ILTNAEMGIDEEFRIVEELLNKIP-----TSFNPHQFKNPANPKTHYET 163 (221)
Q Consensus 93 g~~~~ivvp~~-~~~~~~~~l~~~G-a~V--~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~n~~~~~~g~~t 163 (221)
|++++||+|++ ++..++++++.+| ++| +.++++ |+++.+.+++++++.+ +++++++ .|+..++ |+.|
T Consensus 162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g~--fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~ri~-GQ~T 237 (468)
T 4f4f_A 162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEGN--FDDCQNLVKGMFNDLEFCDALSLSGVNS-INWARIM-PQVV 237 (468)
T ss_dssp SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEESC--HHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHHHG-GGHH
T ss_pred CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCCC--HHHHHHHHHHHHhccccccccceEeCCC-CCHHHHH-hHHH
Confidence 99999999998 9999999999997 465 566664 9999999999887642 3566665 5787775 9999
Q ss_pred HHHHHHHhhCCCCCE---EEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 164 TGPEIWEGTRGQVDI---FVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~---vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
++.||++|++ .+|. |+||+|+||+++|++.+.+.-.|..|+|+| +.++++|
T Consensus 238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l 291 (468)
T 4f4f_A 238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDIL 291 (468)
T ss_dssp HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHH
T ss_pred HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHH
Confidence 9999999994 7899 999999999999999884443478899999 7777665
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=6.5e-32 Score=240.35 Aligned_cols=186 Identities=17% Similarity=0.075 Sum_probs=152.4
Q ss_pred CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHH-HcC
Q 043209 19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSM---IKDAE-EKGLITPGKTVLIECTSGNTGIGMACFAA-AKG 93 (221)
Q Consensus 19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~assGN~~~alA~~a~-~~g 93 (221)
|||+++..- .+.++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||.|.+++++ ..|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 799887520 01239999999999999999999998 77775 4553 456999999999999777776 789
Q ss_pred CeEEEEecCC-CCHHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHhhC-----CCeeecCCCCCCccHHHHHhhH
Q 043209 94 YKLILVMPAF-MSLEKRIILQAYGA---QLILTNAEMGIDEEFRIVEELLNKI-----PTSFNPHQFKNPANPKTHYETT 164 (221)
Q Consensus 94 ~~~~ivvp~~-~~~~~~~~l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~ 164 (221)
++++||+|++ ++..|+++|+.+|+ +|+.++++ |++|++.+++++++. -+..+++++ |+..++ |+.+.
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G~--fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~ri~-gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNGV--FDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWARVV-AQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEESC--HHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHHHH-HHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECCC--HHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHHHH-hHHHH
Confidence 9999999997 99999999999998 67778775 999999999887631 156677664 787775 99988
Q ss_pred HHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209 165 GPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL 216 (221)
Q Consensus 165 ~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~ 216 (221)
++|+..|+. +.+|+|+||+|+||+++|++.+.+.-.|..|+|+||+++ +++
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l 305 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVL 305 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHH
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHH
Confidence 888888873 359999999999999999988765545878999999998 443
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.92 E-value=0.69 Score=33.25 Aligned_cols=50 Identities=20% Similarity=0.163 Sum_probs=40.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.++..+.|..|..++...+..|.+++++-. +..+.+.++..|..++.-+.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~ 58 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNA 58 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCT
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCC
Confidence 378888999999999999999998887764 46677777788888766544
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=93.50 E-value=0.94 Score=35.01 Aligned_cols=76 Identities=20% Similarity=0.323 Sum_probs=57.0
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209 43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ 113 (221)
Q Consensus 43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~ 113 (221)
+|.--+=+......+++|.+.|. +..||.+++|.++..+.-.. -|++.++|- |. ..+++..+.|+
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 44446667788888899999885 56555556699987666533 688888887 43 35788999999
Q ss_pred HcCCEEEEeCC
Q 043209 114 AYGAQLILTNA 124 (221)
Q Consensus 114 ~~Ga~V~~v~~ 124 (221)
..|.+|+.-..
T Consensus 96 ~~G~~V~t~tH 106 (201)
T 1vp8_A 96 KRGAKIVRQSH 106 (201)
T ss_dssp HTTCEEEECCC
T ss_pred hCCCEEEEEec
Confidence 99999998654
No 45
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.86 E-value=1 Score=37.12 Aligned_cols=60 Identities=28% Similarity=0.335 Sum_probs=46.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+...+.+|++.+|...+|..|.+++..++..|.+++++.. +..+++.++.+|++.+....
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~ 193 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDYS 193 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeCC
Confidence 4456788888666666899999999999999997665543 56788888899997665433
No 46
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.57 E-value=1.5 Score=36.27 Aligned_cols=59 Identities=27% Similarity=0.378 Sum_probs=45.8
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+...+.+|++.+|...+|..|.+++..++.+|.+++++.. +..+++.++.+|++.+...
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 3456788888666666899999999999999997665543 5678888899999866543
No 47
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.56 E-value=0.83 Score=39.78 Aligned_cols=57 Identities=35% Similarity=0.357 Sum_probs=46.1
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
..+.+|.+.+|...+|..|.+.+..|+.+|.+.+++. .+..+++.++.+|++.+...
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~---~~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV---SSPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE---CCHHHHHHHHhhCCcEEEec
Confidence 4678888766666669999999999999999877776 36788999999999876543
No 48
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.30 E-value=1.1 Score=37.08 Aligned_cols=63 Identities=24% Similarity=0.238 Sum_probs=48.0
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
+.....+.+|++ |+..++|..|...+..|+.+|.+.++.+. .+..|++.++.+||+.+....+
T Consensus 152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCCC
Confidence 344556778877 45556688999999999999998877773 4678899999999987765544
No 49
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.15 E-value=2.6 Score=33.87 Aligned_cols=74 Identities=14% Similarity=0.067 Sum_probs=47.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
|+..+|+.+++--|+++|......|.+++++-... ......+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36778999999999999998888898866643321 1123345677788877765432 23445555555555554
No 50
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.10 E-value=1.8 Score=35.69 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=45.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL-QAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l-~~~Ga~V~~v 122 (221)
+...+.+|++.+|...+|..|.+++..++..|.+++++. .+..+++.+ +.+|++.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA---GGAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHHcCCCEEEE
Confidence 566788888877777779999999999999999766554 346778877 8899976554
No 51
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.01 E-value=1.7 Score=36.33 Aligned_cols=60 Identities=22% Similarity=0.160 Sum_probs=46.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+...+.+|++.+|...+|..|.+++..++..|.+++++. .+..+++.++.+|++.+....
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~~ 220 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATA---GSTGKCEACERLGAKRGINYR 220 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCSEEEETT
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEEeCC
Confidence 556788888867776889999999999999999855554 356788888889998765433
No 52
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.99 E-value=2.1 Score=35.48 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=46.2
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 59 ~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.+.+...+.+|++.+| .++|..|.+.+..|+.+|.+++++. .+..+++.++.+|++.+.-..
T Consensus 157 ~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~i~~~ 218 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVD---IDDAKLNLARRLGAEVAVNAR 218 (340)
T ss_dssp HHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEe---CCHHHHHHHHHcCCCEEEeCC
Confidence 3445566788887555 4568899999999999999765543 357888889999998765443
No 53
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.90 E-value=3.2 Score=33.38 Aligned_cols=74 Identities=20% Similarity=0.048 Sum_probs=44.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~ 142 (221)
|+..+|+.+++--|+++|......|.++++.-... ......+.++..|.+++.+..+- +.++..+..++..++.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46778888889999999998888888755542211 11223455666777777654331 2334444445555544
No 54
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.73 E-value=2 Score=36.45 Aligned_cols=58 Identities=21% Similarity=0.280 Sum_probs=43.1
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+...+.+|.+.+| .++|..|......|+.+|.+.++.+. .+..+++.++.+|++++.
T Consensus 178 l~~~~~~~g~~VlV-~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i~ 235 (398)
T 1kol_A 178 AVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIAD 235 (398)
T ss_dssp HHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEEE
T ss_pred HHHcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEEc
Confidence 34456788877555 55799999999999999985444442 357888889999998543
No 55
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.24 E-value=0.92 Score=38.32 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=40.8
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 67 ~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
.+|.+.+|...+|..|.+.+..|+.+|.+++++. +..+++.++.+|++.++-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFD 214 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEE
Confidence 5677766666779999999999999999866554 356788889999976553
No 56
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.23 E-value=1.8 Score=35.54 Aligned_cols=59 Identities=27% Similarity=0.352 Sum_probs=45.1
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+.+...+.+|.+.+|...+|..|.+....|+.+|.+++++. +..+++.++.+|++.+.-
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~ 202 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCIN 202 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEe
Confidence 44567788888756655689999999999999999766554 345678889999986543
No 57
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.10 E-value=2.6 Score=35.32 Aligned_cols=57 Identities=28% Similarity=0.285 Sum_probs=44.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+...+.+|++.+|.. +|..|.+.+..|+.+|.+++++. .+..+++.++.+|++.+..
T Consensus 183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS---SSREKLDRAFALGADHGIN 239 (363)
T ss_dssp TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHHHHcCCCEEEc
Confidence 556788888755555 89999999999999999766554 3567888899999976654
No 58
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.95 E-value=2.4 Score=35.19 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=44.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL 119 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V 119 (221)
+...+.+|++.+|...+|..|.+++..|+..|.+++++ .+..+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56678888886666668999999999999999976555 2567788889999998
No 59
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.93 E-value=2.5 Score=35.43 Aligned_cols=58 Identities=26% Similarity=0.318 Sum_probs=44.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+.+.+.+|++.+|...+|..|.+++..|+.+|.+++++.. +..+++.++.+|++.+..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 214 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPIN 214 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEe
Confidence 4456778877666666899999999999999997555543 467788888899986553
No 60
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=90.79 E-value=5.3 Score=31.86 Aligned_cols=56 Identities=23% Similarity=0.294 Sum_probs=38.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~ 124 (221)
++..+|+.+++--|.++|......|.+++++...... ......++..|.++..+..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC 69 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeC
Confidence 3677889899999999999988899987776544221 2234445566777665543
No 61
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=90.74 E-value=1.4 Score=36.76 Aligned_cols=65 Identities=18% Similarity=0.309 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 53 AFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 53 a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++.++..+.+.| ++..+|.+.+|..|.+.+..|+.+|.+++++.. +..+++.++.+|++.+....
T Consensus 153 a~~~~~~~~~~g----~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~ 217 (349)
T 3pi7_A 153 AIAMFDIVKQEG----EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNEK 217 (349)
T ss_dssp HHHHHHHHHHHC----CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEETT
T ss_pred HHHHHHHHhhCC----CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEECC
Confidence 455555554333 145566678899999999999999997666653 34567777889997665443
No 62
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.64 E-value=2 Score=36.16 Aligned_cols=59 Identities=22% Similarity=0.229 Sum_probs=43.8
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
.+...+.+|.+.+|. ++|..|.+....|+.+|.+-++.+ +.+..+++.++.+|++.+..
T Consensus 175 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 175 VDLSGIKAGSTVAIL-GGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEC
Confidence 345567788775555 569999999999999999555554 33577888889999986654
No 63
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.56 E-value=1.7 Score=36.12 Aligned_cols=58 Identities=26% Similarity=0.433 Sum_probs=44.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+...+.+|++.+|...+|..|.+++..|+.+|.+++++... ..+++.++.+|++.+..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~ 210 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLP 210 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEec
Confidence 56678888886777777999999999999999977666543 44566777889886653
No 64
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=90.51 E-value=4.3 Score=34.99 Aligned_cols=101 Identities=15% Similarity=0.068 Sum_probs=65.9
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-H----------
Q 043209 40 EMMEPCSSVKDRIAFSMIKDAEEKGLI-TPGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPAFMS-L---------- 106 (221)
Q Consensus 40 E~~~ptGs~K~R~a~~~~~~a~~~g~~-~~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~~-~---------- 106 (221)
=+.+|.|+-+. ....+...++++.+ ..++..+|+.+++..|+|+|..... .|.+++++-..... .
T Consensus 19 ~~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn 96 (405)
T 3zu3_A 19 VTAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYN 96 (405)
T ss_dssp CCCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHH
T ss_pred cCCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchh
Confidence 35678887554 55667777777776 4457778888888999999999888 99988776433211 1
Q ss_pred --HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 107 --EKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 107 --~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
...+.++..|.++..+..+ .+.++..+.+.+..++.
T Consensus 97 ~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 97 SAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 1233566788877665433 23445555666666665
No 65
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=90.44 E-value=1.7 Score=36.84 Aligned_cols=63 Identities=22% Similarity=0.347 Sum_probs=44.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 53 AFSMIKDAEEKGLITPGKTVLIEC-TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 53 a~~~~~~a~~~g~~~~g~~~vv~a-ssGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
++..+..+.+. |.+.+|.. .+|..|.+....|+.+|.+++++. .+..+++.++.+|++.+...
T Consensus 160 a~~~~~~~~~~-----g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 160 ALGMVETMRLE-----GHSALVHTAAASNLGQMLNQICLKDGIKLVNIV---RKQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp HHHHHHHHHHT-----TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE---SSHHHHHHHHHTTCSCEEET
T ss_pred HHHHHHHhccC-----CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHhCCCcEEEeC
Confidence 44555554433 35556653 789999999999999999866654 35788888999999865543
No 66
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.07 E-value=2 Score=35.75 Aligned_cols=60 Identities=25% Similarity=0.157 Sum_probs=44.0
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+.+...+.+|.+.+|. ++|..|.+....|+.+|.+-++.+ +.+..+++.++.+|++.+.-
T Consensus 158 al~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~ 217 (352)
T 3fpc_A 158 GAELANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFAV--GSRKHCCDIALEYGATDIIN 217 (352)
T ss_dssp HHHHTTCCTTCCEEEE-CCSHHHHHHHHHHHTTTCSSEEEE--CCCHHHHHHHHHHTCCEEEC
T ss_pred HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEE--CCCHHHHHHHHHhCCceEEc
Confidence 3455667888775555 579999999999999998434444 34577888899999976543
No 67
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.04 E-value=1.9 Score=35.79 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=44.2
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
.+...+.+|++.+|...+|..|.+++..|+.+|.+++++.... .+++.++.+|++.+...
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~ 196 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDT 196 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEET
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeC
Confidence 3556788888877777777999999999999999876665433 35566667898766543
No 68
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.90 E-value=3.9 Score=32.02 Aligned_cols=55 Identities=16% Similarity=0.107 Sum_probs=36.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|.-|.++|......|.+++++-..... ....+.++..+.++..+.
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA 64 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3667888889999999999988889886665432111 122334455566665544
No 69
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=89.85 E-value=6.4 Score=32.87 Aligned_cols=55 Identities=22% Similarity=0.241 Sum_probs=39.1
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.+++--|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~ 107 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE
Confidence 3677888888999999999988899987777644321 233455666777766554
No 70
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.85 E-value=3.9 Score=32.80 Aligned_cols=54 Identities=17% Similarity=0.076 Sum_probs=37.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|.-|.++|......|.+++++.... ......+.++..|.++..+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 6778899999999999999888999877766442 22333455566665555443
No 71
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.83 E-value=4.8 Score=29.87 Aligned_cols=49 Identities=18% Similarity=0.104 Sum_probs=38.1
Q ss_pred EEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 73 LIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++..+.|..|..++...+.. |.+++++-. +..+.+.++..|.+++..+.
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~ 91 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDA 91 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCT
T ss_pred EEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCC
Confidence 66667899999999999888 998777743 45677777788888766544
No 72
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.64 E-value=5.4 Score=34.34 Aligned_cols=50 Identities=16% Similarity=0.233 Sum_probs=40.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.|+..+.|..|..++......|++++++- .+..+++.++..|..++.-+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId---~d~~~v~~~~~~g~~vi~GDa 55 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLD---HDPDHIETLRKFGMKVFYGDA 55 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEE---CCHHHHHHHHHTTCCCEESCT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEE---CCHHHHHHHHhCCCeEEEcCC
Confidence 37888899999999999999999988774 346777888888887766554
No 73
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=89.61 E-value=4 Score=32.66 Aligned_cols=46 Identities=22% Similarity=0.106 Sum_probs=32.3
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcC
Q 043209 70 KTVLIECTSGN--TGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116 (221)
Q Consensus 70 ~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~G 116 (221)
+..+|+..+|+ -|.++|......|.+++++.... ....++.+...+
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~ 74 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF 74 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc
Confidence 56678877777 89999988888898876665444 455555554433
No 74
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=89.54 E-value=6.2 Score=30.73 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=36.3
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC---CCcEEEEEeCCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN---PEIKVYGVEPAE 212 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~---~~~kvigVe~~~ 212 (221)
....+++++-+.++|+||+. +...+.|+..++++.+ .++.|+|++...
T Consensus 168 ~~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~~ 218 (272)
T 3o74_A 168 RLMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDNQ 218 (272)
T ss_dssp HHHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCCG
T ss_pred HHHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCChH
Confidence 45566666652269999984 6678889999999987 579999997653
No 75
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=89.53 E-value=6.8 Score=31.18 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=35.4
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
....+++++- ++||+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 176 ~~~~~~l~~~-~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~~ 226 (294)
T 3qk7_A 176 LAASRLLALE-VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGLP 226 (294)
T ss_dssp HHHHHHHHSS-SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred HHHHHHHcCC-CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence 3445565553 579999974 6678889999999987 378999998654
No 76
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.47 E-value=1.9 Score=36.01 Aligned_cols=60 Identities=22% Similarity=0.293 Sum_probs=45.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~ 121 (221)
+.+.+.+|.+.+|...+|..|.+....|+.+|.+.++++.... ...+++.++.+|++.+.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 4466788888666666799999999999999998887775543 34567788899997654
No 77
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=89.38 E-value=7.1 Score=31.16 Aligned_cols=54 Identities=17% Similarity=0.107 Sum_probs=33.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~ 123 (221)
+..+|+.++|--|.++|......|.+++++-.... .....+.++..|.++..+.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 81 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA 81 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 66788888899999999888888887554432211 1122334455566665544
No 78
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=89.21 E-value=5 Score=31.86 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=37.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~ 124 (221)
+..+|+.++|.-|.++|......|.++++....... ....+.++..|.++..+..
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEc
Confidence 567888888999999999999899987666433211 2223445566777665543
No 79
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.14 E-value=4 Score=32.26 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=35.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|--|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence 567888888999999999988889986665433211 122344555666665544
No 80
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.13 E-value=4.4 Score=33.79 Aligned_cols=57 Identities=19% Similarity=0.189 Sum_probs=43.8
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|+..+|..|.+++..++..|.+++++.. +..+++.++.+|++.+.
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF 212 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence 4556788888677666899999999999999997655543 46777777889987654
No 81
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=89.05 E-value=2.5 Score=33.98 Aligned_cols=74 Identities=9% Similarity=-0.040 Sum_probs=52.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
|+..+|+.+++--|+++|......|.+++++-.........+.+...|.++..+..+ .+.++..+...+..++.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 477799999999999999999999998888776555566667777778776655432 13445555555555554
No 82
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.91 E-value=5.6 Score=32.64 Aligned_cols=57 Identities=28% Similarity=0.302 Sum_probs=43.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|+..+|..|.+++..++..|.+++++.. +..+++.++.+|++.+.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF 195 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 4556778888777777899999999999999997665542 45677777888986544
No 83
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.72 E-value=2.6 Score=35.95 Aligned_cols=57 Identities=23% Similarity=0.356 Sum_probs=42.9
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+.+.+|.+.+|. ++|..|.+....|+.+|.+-++.+ +.+..+++.++.+|++.+.-.
T Consensus 209 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 209 GGIRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVIDP 265 (404)
T ss_dssp CCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECT
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEcC
Confidence 357888775555 559999999999999999544444 246788899999999866543
No 84
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=88.61 E-value=7.1 Score=30.29 Aligned_cols=55 Identities=27% Similarity=0.227 Sum_probs=37.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCCH-HHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-FMSL-EKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-~~~~-~~~~~l~~~Ga~V~~v~~ 124 (221)
++.+|+..+|..|.+++......|.+++++... .... ...+.++..|.++..+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence 566888888999999999988889987776654 2222 223445555666655543
No 85
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.57 E-value=4 Score=33.14 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=35.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v 122 (221)
+..+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE
Confidence 677888889999999999998899886665433211 12233445556555544
No 86
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=88.56 E-value=4.2 Score=30.57 Aligned_cols=57 Identities=28% Similarity=0.459 Sum_probs=42.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|+..+|..|.+++..++..|.+++++.. +..+.+.++.+|++.+.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 88 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVG 88 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEe
Confidence 3456778877666666899999999999999987655542 45666677788986543
No 87
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.56 E-value=4.6 Score=31.54 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=34.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v 122 (221)
++.+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 67 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSV 67 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 567888899999999999988889886666533111 11223444445555444
No 88
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=88.49 E-value=7.1 Score=31.33 Aligned_cols=55 Identities=25% Similarity=0.271 Sum_probs=37.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~ 123 (221)
++..+|+.+++.-|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV 71 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEE
Confidence 3677888888999999999988889987776644321 223444555666666554
No 89
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.49 E-value=4.2 Score=34.04 Aligned_cols=59 Identities=15% Similarity=0.257 Sum_probs=43.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+...+.+|++.+|. ++|..|.+.+..|+.+|.+.++.+. .+..+++.++.+|++.+.-.
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEET
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecC
Confidence 45567888775555 5799999999999999985444442 35778888899999765543
No 90
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.48 E-value=4.9 Score=33.26 Aligned_cols=55 Identities=22% Similarity=0.225 Sum_probs=42.7
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
..+.++++.+|...+|..|.+++..++.+|.+++++.. +..+++.++.+|++.+.
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~~ 216 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADETV 216 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 46778888777777799999999999999997655543 46777778888987543
No 91
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.46 E-value=4.1 Score=33.77 Aligned_cols=52 Identities=29% Similarity=0.325 Sum_probs=40.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+|.+.+|.+.+|..|.+.+..|+.+|.+++++. .+..+++.++.+|++.+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 201 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA---SRNETIEWTKKMGADIVLN 201 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCcEEEE
Confidence 677767776889999999999999999655543 3567888888899876553
No 92
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.42 E-value=6.6 Score=32.67 Aligned_cols=57 Identities=25% Similarity=0.386 Sum_probs=44.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.++++.+|...+|..|.+++..++..|.+++++.. +..+++.++.+|++.+.
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 3566788888777777799999999999999987655542 46677788889987554
No 93
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=88.35 E-value=5 Score=31.73 Aligned_cols=55 Identities=20% Similarity=0.329 Sum_probs=37.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.+++......|.++++....+.. ....+.++..|.++..+.
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3677888888999999999988899988776433211 122344555666665554
No 94
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.32 E-value=4.9 Score=31.83 Aligned_cols=55 Identities=18% Similarity=0.176 Sum_probs=36.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 66 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVG 66 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 467788889999999999998889998766543211 1122334555566665543
No 95
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=88.30 E-value=3.1 Score=34.69 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=43.1
Q ss_pred CCCCCC-CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 043209 64 GLITPG-KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLIL 121 (221)
Q Consensus 64 g~~~~g-~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~ 121 (221)
+.+.+| .+.+|...+|..|.+....|+.+|.+.++++..... ..+.+.++.+|++.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 567888 776666667999999999999999987777754333 3445667889987654
No 96
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.29 E-value=5.9 Score=32.78 Aligned_cols=58 Identities=26% Similarity=0.265 Sum_probs=43.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+...+.++++.+|+..+|..|.+++..++.. |.+++++.. +..+++.++.+|++.+..
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN 222 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence 3456778888777777779999999999999 997554432 467777788899876543
No 97
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.18 E-value=4.1 Score=32.18 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=36.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~ 123 (221)
++..+|+.++|--|.++|......|.+++++-.... .....+.++..|.++..+.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 367788888899999999988888988666543321 1122344555666665544
No 98
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=88.12 E-value=5 Score=31.87 Aligned_cols=54 Identities=22% Similarity=0.033 Sum_probs=35.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|-.|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 86 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEE
Confidence 567888899999999999988889886666533211 112233444565555443
No 99
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.09 E-value=5.1 Score=32.92 Aligned_cols=56 Identities=25% Similarity=0.327 Sum_probs=42.8
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
...+.++++.+|+..+|..|.+++..++..|.+++++.. +..+++.++.+|++.+.
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI 195 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 556788888677666799999999999999987665543 45677777788987554
No 100
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=88.09 E-value=5.2 Score=31.94 Aligned_cols=55 Identities=22% Similarity=0.212 Sum_probs=36.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 356788888899999999998888988666543311 1122344555677666543
No 101
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.08 E-value=5.7 Score=32.48 Aligned_cols=56 Identities=25% Similarity=0.278 Sum_probs=43.1
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
...+.++++.+|+..+|..|.+++..++..|.+++++.. +..+++.++.+|++.+.
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI 190 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 566788888677777899999999999999987665543 46677777788987554
No 102
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.93 E-value=4.7 Score=31.39 Aligned_cols=54 Identities=19% Similarity=0.091 Sum_probs=36.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|.-|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 567888888999999999988889987766543211 222344555666665543
No 103
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=87.91 E-value=5.4 Score=31.90 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=35.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+..+|-.|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence 567888888999999999988889887766543211 112344555666655443
No 104
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=87.90 E-value=8.3 Score=30.12 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=35.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+..+|+.++|.-|.+++......|.+++++.... .....+.++..|.++..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVK 60 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEE
Confidence 5678899999999999999888998876664332 1222224555666665543
No 105
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.85 E-value=3.5 Score=33.42 Aligned_cols=32 Identities=28% Similarity=0.257 Sum_probs=25.3
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGN--TGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|. -|.++|......|.+++++..
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r 65 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ 65 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 66788888877 999999988888988666543
No 106
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.81 E-value=6.9 Score=31.23 Aligned_cols=55 Identities=18% Similarity=0.171 Sum_probs=37.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
++..+|+.++|--|.++|......|.++++...... .....+.++..|.++..+.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 87 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 367788888999999999998889998776643321 1223344556676666554
No 107
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.76 E-value=4.4 Score=32.47 Aligned_cols=54 Identities=19% Similarity=0.104 Sum_probs=35.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 56789999999999999998888988666543311 1122344555566665543
No 108
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=87.76 E-value=9.1 Score=30.43 Aligned_cols=47 Identities=6% Similarity=-0.030 Sum_probs=35.0
Q ss_pred hHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 163 TTGPEIWEGTR--GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~--~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
....+++++.+ ..||+||| .+..++.|+..++++.+ .++.|+|.+..
T Consensus 178 ~~~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 230 (295)
T 3hcw_A 178 NYMQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFNDS 230 (295)
T ss_dssp HHHHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEECCS
T ss_pred HHHHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence 34556666552 36899986 56778899999999987 37889998753
No 109
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=87.74 E-value=3.2 Score=32.13 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=53.6
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209 43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ 113 (221)
Q Consensus 43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~ 113 (221)
+|.--+=+......+++|.+.+. +..||.+++|.++..+.-.. -| +.++|- |. ..+++..+.|+
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556677788888899999885 56555556699876655422 34 666665 33 35788999999
Q ss_pred HcCCEEEEeCC
Q 043209 114 AYGAQLILTNA 124 (221)
Q Consensus 114 ~~Ga~V~~v~~ 124 (221)
..|.+|+.-..
T Consensus 103 ~~G~~V~t~tH 113 (206)
T 1t57_A 103 ERGVNVYAGSH 113 (206)
T ss_dssp HHTCEEECCSC
T ss_pred hCCCEEEEeec
Confidence 99999997654
No 110
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.68 E-value=5.7 Score=31.64 Aligned_cols=54 Identities=20% Similarity=0.178 Sum_probs=37.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
+..+|+.++|--|.++|......|.++++...... .....+.++..|.++..+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 66788888899999999998889998877654321 1223344556676666554
No 111
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.68 E-value=5.8 Score=32.01 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=37.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 67788999999999999998889998776654421 1122334555666666554
No 112
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.67 E-value=8.3 Score=29.87 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=25.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+++.+|+.++|.-|.+++......|.+++++.
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~ 45 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLG 45 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 36678888889999999988888888766554
No 113
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=87.67 E-value=1.4 Score=38.17 Aligned_cols=55 Identities=27% Similarity=0.338 Sum_probs=45.1
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
..+.+|++.+|...+|..|.+++..|+.+|.+.+++. .+..+++.++.+|++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEE
Confidence 5678888866666679999999999999999877766 367888889999997654
No 114
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=87.41 E-value=7.3 Score=32.47 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=41.1
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
..+.+|.+.+|.. .|..|......|+.+ |.+++++. .+..+++.++.+||+.+.-
T Consensus 182 ~~~~~g~~VlV~G-aG~vG~~avqlak~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 237 (359)
T 1h2b_A 182 RTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALD---VKEEKLKLAERLGADHVVD 237 (359)
T ss_dssp TTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEE---SSHHHHHHHHHTTCSEEEE
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCEEEe
Confidence 5677887755554 489999999999999 98744443 2577888899999976553
No 115
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.37 E-value=3.4 Score=33.20 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=37.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
+..+|+.++|--|.++|......|.+++++...+. .....+.++..|.++..+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 56788888999999999998889998777653321 1222344556676666554
No 116
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=87.36 E-value=6.2 Score=30.87 Aligned_cols=32 Identities=28% Similarity=0.262 Sum_probs=26.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 56789999999999999998888988666543
No 117
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=87.32 E-value=6.1 Score=31.37 Aligned_cols=55 Identities=24% Similarity=0.210 Sum_probs=37.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|.-|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIK 85 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 3667888888999999999988899987776653321 122344556666665554
No 118
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.25 E-value=5.5 Score=33.05 Aligned_cols=56 Identities=23% Similarity=0.265 Sum_probs=41.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|.. +|..|.+++..|+.+|.+ ++.+. .+..+++.++.+|++.+.
T Consensus 162 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~-Vi~~~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAF-VVCTA--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCE-EEEEE--SCHHHHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCE-EEEEc--CCHHHHHHHHHhCCCEEE
Confidence 444577887755554 699999999999999998 44332 357788888999997544
No 119
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=87.24 E-value=9.1 Score=29.86 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=33.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHc--CCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYK-LILVMPAFMSLEKRIILQAY--GAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~-~~ivvp~~~~~~~~~~l~~~--Ga~V~~v 122 (221)
++.+|+.++|--|.+++......|.+ ++++. .+.....++.++.. +.++..+
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~~~~~~~~~l~~~~~~~~~~~~ 60 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITFH 60 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCTTSEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cCchHHHHHHHHHhCCCceEEEE
Confidence 56788888899999999998888987 44443 33333444444433 4454443
No 120
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=87.17 E-value=4.6 Score=32.24 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=27.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+++.+|+.++|--|.++|......|.+++++-.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 367788888999999999999999998776654
No 121
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=87.10 E-value=6.1 Score=32.34 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=37.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------CCCHHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-----------FMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-----------~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+..+|+.++|--|.++|......|.+++++... .......+.++..|.++..+..
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS 93 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC
Confidence 667888888999999999988889987776432 1112334556666777766544
No 122
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=87.01 E-value=6 Score=31.11 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=26.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.++|.-|.+++......|.+++++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888999999999988888988666543
No 123
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.93 E-value=1.5 Score=36.01 Aligned_cols=58 Identities=22% Similarity=0.191 Sum_probs=43.3
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 59 ~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+.+...+.+|.+.+|... |..|.+....|+.+|.+++++. +..+++.++.+|++.+.
T Consensus 133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 3446677888887555555 9999999999999999766665 33466677889987654
No 124
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.92 E-value=6.4 Score=31.25 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=45.7
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+.++|--|.++|......|.++++...... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 366788888899999999998889998877654321 122344566677777665433 1233344444444443
No 125
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=86.91 E-value=7.5 Score=30.70 Aligned_cols=31 Identities=39% Similarity=0.357 Sum_probs=25.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+..+|+..+|.-|.+++......|.+++++.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 5678888899999999998888888766654
No 126
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=86.73 E-value=4.9 Score=32.36 Aligned_cols=32 Identities=22% Similarity=0.132 Sum_probs=26.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.++|--|.++|......|.+++++-.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788888999999999988888987766543
No 127
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.70 E-value=6.5 Score=31.39 Aligned_cols=53 Identities=11% Similarity=0.109 Sum_probs=34.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v 122 (221)
++.+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 76 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR 76 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 567888899999999999988889887665433111 11123344445555443
No 128
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.68 E-value=3.4 Score=32.62 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=34.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3567888888999999999988889886665432111 112233344455555443
No 129
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=86.64 E-value=7.6 Score=32.11 Aligned_cols=59 Identities=20% Similarity=0.321 Sum_probs=42.7
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+.+...+.+|++.+|...+|..|.+++..++..|.+++++... ..+++.++.+|++.+.
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI 219 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence 3444457788887777777999999999999999976665533 3345666778987543
No 130
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=86.62 E-value=7.4 Score=30.36 Aligned_cols=55 Identities=18% Similarity=0.181 Sum_probs=37.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.+++......|.++++...... .....+.++..|.++..+.
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 356688888899999999998889998877654321 1222344566676665554
No 131
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=86.62 E-value=8.8 Score=31.81 Aligned_cols=57 Identities=28% Similarity=0.411 Sum_probs=43.0
Q ss_pred HcCCCCCC--CeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH-cCCEEEE
Q 043209 62 EKGLITPG--KTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQA-YGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g--~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~-~Ga~V~~ 121 (221)
+.+.+.+| ++.+|+..+|..|.+++..++..|. +++++.. +..+++.++. +|++.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 45667788 8877777779999999999999998 6655543 3567777766 8986544
No 132
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=86.49 E-value=7.2 Score=30.80 Aligned_cols=54 Identities=22% Similarity=0.192 Sum_probs=37.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|--|.+++......|.++++....+. .....+.++..|.++..+.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEE
Confidence 56688888899999999999889998877664432 1223445556666665543
No 133
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.48 E-value=5.2 Score=31.09 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=25.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|..|.+++......|.+++++..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence 56688888899999999988888887666553
No 134
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.45 E-value=7 Score=31.62 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=27.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.+++--|.++|......|.+++++-.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 67788889999999999999889998877653
No 135
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.30 E-value=8.3 Score=30.80 Aligned_cols=31 Identities=10% Similarity=0.242 Sum_probs=22.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|--|.++|......|.+++++.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence 5667888888888888888777777655544
No 136
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=86.05 E-value=6.7 Score=30.92 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=26.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+++.+|+..+|..|.+++......|.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLD 38 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 35678888999999999998888898866654
No 137
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.98 E-value=6.7 Score=32.44 Aligned_cols=57 Identities=32% Similarity=0.399 Sum_probs=42.1
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+.+...+ +|++.+|... |..|.+++..|+.+|. +++++.. +..+++.++.+|++.+.
T Consensus 160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI 217 (348)
T ss_dssp HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 3455566 8877566555 9999999999999998 6555432 47788888899997554
No 138
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=85.90 E-value=8 Score=30.32 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|.-|.+++......|.+++++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888999999999988888987666543
No 139
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.78 E-value=5.1 Score=33.73 Aligned_cols=58 Identities=28% Similarity=0.311 Sum_probs=43.5
Q ss_pred HHHcCC-CCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 60 AEEKGL-ITPGKTVLIECTSGNTGIGMACFAAAKG-YKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 60 a~~~g~-~~~g~~~vv~assGN~~~alA~~a~~~g-~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+.+... +.+|.+.+|.. +|..|.+.+..|+.+| .+++++.+ +..+++.++.+|++.+.
T Consensus 186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 344556 77887766666 8999999999999999 46655543 56788888999997554
No 140
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=85.75 E-value=6.8 Score=30.51 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=26.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999988888988776654
No 141
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=85.66 E-value=12 Score=29.53 Aligned_cols=46 Identities=17% Similarity=0.121 Sum_probs=35.3
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP-EIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-~~kvigVe~~ 211 (221)
....+++++- +++|+||+. +..++.|+..++++.+. ++.|+|++..
T Consensus 184 ~~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~ 230 (293)
T 3l6u_A 184 RVMRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDGN 230 (293)
T ss_dssp HHHHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 3455666554 579999975 66778899999999875 8999999754
No 142
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.57 E-value=6.1 Score=31.41 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.1
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++..+|+.++|--|.++|......|.+++++-
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 36778998999999999999988999877765
No 143
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=85.50 E-value=7.8 Score=30.74 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=26.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++..+|+..+|..|.+++......|.+++++..
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 366788889999999999998888988666553
No 144
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=85.36 E-value=5.7 Score=31.77 Aligned_cols=56 Identities=16% Similarity=0.030 Sum_probs=40.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+++.+|+.++|--|.++|......|.+++++-.........+.++..|.++..+..
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEe
Confidence 36778888999999999999999999877766332223445566777888876644
No 145
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.20 E-value=9.7 Score=31.29 Aligned_cols=57 Identities=25% Similarity=0.230 Sum_probs=42.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~ 121 (221)
+...+.+|++.+|...+|..|.+++..++..|.+++++. .+..+++.++ .+|++.+.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~---~~~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA---GSKEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTSCCSEEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHHcCCceEE
Confidence 445677888867777779999999999999998755544 2467777777 68986544
No 146
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=85.20 E-value=7.5 Score=31.48 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=34.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcC-CEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYG-AQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~G-a~V~~v 122 (221)
++.+|+.++|--|.++|......|.+++++..... .....+.++..| .++..+
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 96 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE
Confidence 56788888899999999988888988777654321 223334444444 344433
No 147
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=85.09 E-value=3.5 Score=34.63 Aligned_cols=54 Identities=24% Similarity=0.216 Sum_probs=41.0
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+.+|++.+|...+|..|.+++..|+.+|.+++++. +..+++.++.+|++.+.-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDY 234 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEEC
Confidence 67888766666689999999999999998765543 2356777889999866543
No 148
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.02 E-value=6.4 Score=31.39 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=27.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++..+|+.++|--|.++|......|.+++++-.
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 367788889999999999999889998777653
No 149
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.90 E-value=9.6 Score=30.34 Aligned_cols=54 Identities=22% Similarity=0.185 Sum_probs=35.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCC---EEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGA---QLILT 122 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga---~V~~v 122 (221)
+++.+|+.++|--|.++|......|.+++++-.... .....+.++..|. ++..+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 68 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEE
Confidence 367788889999999999998888998766543211 1122344555554 55444
No 150
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.90 E-value=3.5 Score=34.72 Aligned_cols=58 Identities=21% Similarity=0.273 Sum_probs=41.8
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+...+.+|.+.+|. +.|..|.+.+..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 186 ~~~~~~~~g~~VlV~-GaG~vG~~a~q~a~~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 186 WNTAKVEPGSNVAIF-GLGTVGLAVAEGAKTAGASRIIGID--IDSKKYETAKKFGVNEFV 243 (378)
T ss_dssp HTTTCCCTTCCEEEE-CCSHHHHHHHHHHHHHTCSCEEEEC--SCTTHHHHHHTTTCCEEE
T ss_pred HhhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCcEEE
Confidence 355667888775555 5699999999999999994444442 245677788899997654
No 151
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=84.82 E-value=6.4 Score=31.45 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=27.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++..+|+.+++--|.++|......|.+++++-
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 36778999999999999999999999877764
No 152
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=84.79 E-value=7.4 Score=31.44 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=26.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.++|..|.+++......|.+++++..
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788999999999999998888988766543
No 153
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=84.73 E-value=5.6 Score=32.97 Aligned_cols=64 Identities=22% Similarity=0.113 Sum_probs=43.5
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
++.|.+.+|.+..+..-.+|.++|+..++.++|++++++.|+.. +...++.++ ..|+.+..+..
T Consensus 138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d 207 (307)
T 3tpf_A 138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYD 207 (307)
T ss_dssp HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 34565543555445555689999999999999999999999863 333333333 66777766543
No 154
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.67 E-value=9.4 Score=29.96 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=49.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|.-|.++|......|.+++++-... ......+.++..|.++..+..+ .+.++..+..++..++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 6678888999999999999999999877766442 2344456677778888766543 1334444555555444
No 155
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=84.59 E-value=5.7 Score=31.69 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=25.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.++|--|.++|......|.+++++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788888899999999988888987766553
No 156
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=84.57 E-value=8.6 Score=30.09 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=46.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~ 141 (221)
++.+|+..+|..|.+++......|.+++++.... .....+.++..|.++..+..+- +.++..+..++..++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5678888899999999999988999876665433 3445566666787777665431 233334444444433
No 157
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.52 E-value=6.8 Score=30.95 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=25.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+++.+|+.++|--|.++|......|.+++++.
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 41 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAG 41 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 36678888889999999998888898776654
No 158
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.38 E-value=3.7 Score=34.05 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=40.7
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.++..+.+|.+.+| .++|..|.+.+..|+.+|.+++++.. +..+++.++.+|++.+.
T Consensus 169 l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 169 LKFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHTTCCTTCEEEE-ESCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence 33345778877555 45699999999999999997555543 34466677889987654
No 159
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.37 E-value=12 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 56788989999999999998888988766653
No 160
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.35 E-value=8.3 Score=31.11 Aligned_cols=55 Identities=13% Similarity=0.191 Sum_probs=35.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM---SLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++.+|+.++|--|.++|......|.++++...... .....+.++..|.++..+..
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG 107 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEe
Confidence 67788889999999999988888988666543211 11122334455666655543
No 161
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=84.18 E-value=4.9 Score=32.22 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=33.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 99 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEE
Confidence 567888899999999998888888877764322111 111233444466555443
No 162
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=84.13 E-value=7.1 Score=30.93 Aligned_cols=31 Identities=10% Similarity=0.188 Sum_probs=25.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+..+|+..+|.-|.+++......|.+++++.
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 5668888889999999998888898876655
No 163
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=83.99 E-value=14 Score=29.39 Aligned_cols=70 Identities=11% Similarity=0.103 Sum_probs=44.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
++.|||.+++--|+++|......|.++++.- .+..+...+...+.++..+..+ .+.++..+..++..++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID---IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5668888999999999999999998876653 2455556666566655544322 12344444444444443
No 164
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=83.97 E-value=8.5 Score=30.60 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=27.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++..+|+.+++--|.++|......|.+++++-.
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence 367788889999999999998889998777643
No 165
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.95 E-value=7.9 Score=30.74 Aligned_cols=33 Identities=27% Similarity=0.265 Sum_probs=27.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+++.+|+.++|--|.++|......|.+++++-.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcc
Confidence 367789999999999999999999998777653
No 166
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=83.93 E-value=9.6 Score=31.38 Aligned_cols=53 Identities=28% Similarity=0.340 Sum_probs=39.1
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 65 LITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 65 ~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+.+|++.+|... |..|.+++..++.+|.+++++. .+..+++.++.+|++.+.
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~ 213 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD---IGDEKLELAKELGADLVV 213 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHCCCCEEe
Confidence 4667777555555 7799999999999998654443 357788888889997543
No 167
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=83.89 E-value=14 Score=28.88 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=33.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~ 123 (221)
+++.+|+.++|--|.+++......|.+++++-. +..+.+ ..+.+|.++..+.
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~ 58 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDI---NAEGAKAAAASIGKKARAIA 58 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHHCTTEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEE
Confidence 367788888899999999998888987665432 223222 2233455555543
No 168
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=83.84 E-value=10 Score=29.75 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=26.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+++.+|+.++|.-|.+++......|.+++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 356788889999999999998888987666543
No 169
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=83.84 E-value=5.4 Score=32.08 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=24.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILV 99 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~iv 99 (221)
+++.+|+.++|--|.++|......|.+++++
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~ 38 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVT 38 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 3667888888999999998888888875544
No 170
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=83.67 E-value=5.9 Score=30.52 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=26.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|..|.+++......|.++++...
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999999889988666543
No 171
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=83.63 E-value=11 Score=31.75 Aligned_cols=56 Identities=25% Similarity=0.210 Sum_probs=41.4
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
.+...+.+|.+.+|. ++|..|...+..|+.+|. +++++. .+..+++.++.+|++++
T Consensus 178 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 178 CVSAGVKPGSHVYIA-GAGPVGRCAAAGARLLGAACVIVGD---QNPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHTTTCEEE
T ss_pred HHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCcEE
Confidence 345567888775554 569999999999999998 544443 35778888899999744
No 172
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.56 E-value=9.4 Score=30.82 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=24.6
Q ss_pred CeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSG--NTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assG--N~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++| .-|.++|......|.+++++...
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 5667777776 78888888888889886665543
No 173
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=83.55 E-value=6 Score=33.03 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=38.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
|++.+|... |..|.+++..++.+|.+++++........+++.++.+|++.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 777566665 999999999999999976666543223367778888999876
No 174
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.54 E-value=7.2 Score=31.92 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|--|.++|......|.+++++-
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 6778888889999999999888999887764
No 175
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.20 E-value=4.6 Score=33.64 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=36.2
Q ss_pred CeEEEeeCCChHHHHH-HHHH-HHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 70 KTVLIECTSGNTGIGM-ACFA-AAKGYK-LILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 70 ~~~vv~assGN~~~al-A~~a-~~~g~~-~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
.+.+|... |..|... ...| +.+|.+ ++++.+......+++.++.+|++.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 66455554 9999999 8999 889997 6665544322337777889999876
No 176
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=83.13 E-value=8.8 Score=30.37 Aligned_cols=70 Identities=16% Similarity=0.139 Sum_probs=48.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+.++|--|.++|......|.+++++.... .. ..+.++..++..+.++-. +.++..+...+..++.
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~-~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTE-HA-SVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC-CH-HHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh-HH-HHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 5668888899999999999888999877766443 22 244556677777777654 3455555666665554
No 177
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=82.95 E-value=12 Score=29.26 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=25.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+++.+|+..+|--|.+++......|.+++++.
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 35 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNG 35 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 35668888889999999998888888766554
No 178
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.92 E-value=3 Score=34.26 Aligned_cols=57 Identities=25% Similarity=0.362 Sum_probs=40.3
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
++..+.++. +.+|...+|..|.+++..|+.+|.+++++... ..+++.++.+|++.+.
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence 334566765 65666666999999999999999986665543 3455666779987554
No 179
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.71 E-value=13 Score=29.84 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=26.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|..|.+++......|.+++++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788889999999999998888987666543
No 180
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=82.59 E-value=5.6 Score=33.31 Aligned_cols=57 Identities=23% Similarity=0.200 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|.+.+|. ++|..|.+.+..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 185 NTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECL 241 (373)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEE
Confidence 45567888775555 5799999999999999984343332 245677778889997544
No 181
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=82.56 E-value=3.3 Score=33.61 Aligned_cols=54 Identities=26% Similarity=0.376 Sum_probs=39.8
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
.+ +.+|++.+|...+|..|.+++..++.+|.+++++... ..+++.++.+|++.+
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA 174 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence 55 7788886666667999999999999999976665542 345555667887654
No 182
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.53 E-value=11 Score=30.04 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=26.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|..|.+++......|.+++++..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 56788889999999999998888988666543
No 183
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=82.45 E-value=13 Score=29.13 Aligned_cols=54 Identities=22% Similarity=0.201 Sum_probs=34.3
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHH-HHcCCEEEEeC
Q 043209 70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIIL-QAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l-~~~Ga~V~~v~ 123 (221)
++.+|+.++ +-.|.++|......|.+++++...... ...++.+ +.+|.++..+.
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 79 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYK 79 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCB
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEe
Confidence 566777777 788999998888889887776544332 2333333 23465655544
No 184
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=82.42 E-value=7.8 Score=30.39 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=47.3
Q ss_pred CCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YG-AQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~G-a~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+..+ |.-|.++|......|.+++++.........++.+.. .| ..++.+|-. +.++..+...++.++.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 4677888866 889999999999999988777655444555555533 33 233444433 3455566666666654
No 185
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=82.40 E-value=16 Score=28.90 Aligned_cols=51 Identities=20% Similarity=0.217 Sum_probs=34.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|--|.++|......|.+++++-. +..+++ ..+.+|.++..+.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~ 79 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGT---REDKLKEIAADLGKDVFVFS 79 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCSSEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEE
Confidence 67788888899999999998888987666542 233332 2344566655543
No 186
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.76 E-value=3.2 Score=34.12 Aligned_cols=56 Identities=21% Similarity=0.346 Sum_probs=39.3
Q ss_pred cCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 63 KGLITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 63 ~g~~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+..+.++. +.+|...+|..|.+++..|+.+|.+++++.... .+++.++.+|++.+.
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI 200 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence 34466764 656666679999999999999999866665442 345566678886543
No 187
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.75 E-value=6.8 Score=32.80 Aligned_cols=57 Identities=25% Similarity=0.246 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|.+.+|. ++|..|.+.+..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 189 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 189 NTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCL 245 (376)
T ss_dssp TTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEE
Confidence 45667888775555 4799999999999999984333332 245677778889997554
No 188
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=81.57 E-value=7.1 Score=32.68 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|.. +|..|.+++..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceEe
Confidence 456678887755554 799999999999999984333332 245667777889987543
No 189
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=81.46 E-value=13 Score=32.23 Aligned_cols=100 Identities=16% Similarity=0.131 Sum_probs=63.2
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCC-CH-----------
Q 043209 41 MMEPCSSVKDRIAFSMIKDAEEKGLIT-PGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPAFM-SL----------- 106 (221)
Q Consensus 41 ~~~ptGs~K~R~a~~~~~~a~~~g~~~-~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~-~~----------- 106 (221)
+.+|.|+++. ....+.+.++++.+. .++..+|+.+++-.|+|+|..... .|.+++++-.+.. ..
T Consensus 34 ~a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~ 111 (422)
T 3s8m_A 34 TTHPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNS 111 (422)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHH
T ss_pred cCCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchh
Confidence 4556676553 334466666777763 457778888888899999999888 9998877653321 11
Q ss_pred -HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 107 -EKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 107 -~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
...+.++..|.++..+..+ .+.++..+.+.+..++.
T Consensus 112 ~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 112 AAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 1235667789877765433 13344555555665554
No 190
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=81.13 E-value=7.4 Score=32.35 Aligned_cols=57 Identities=26% Similarity=0.361 Sum_probs=41.3
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+...+.+|.+.+|. ++|..|.+.+..|+.+|. +++++. .+..+++.++.+|++.+.
T Consensus 164 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD---LSATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEE
Confidence 344457788775554 569999999999999998 444443 357788888999997443
No 191
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=81.08 E-value=7.9 Score=32.35 Aligned_cols=57 Identities=19% Similarity=0.292 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|++.+|. ++|..|.+.+..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 186 ~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 186 NTAKVEPGSTCAVF-GLGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFV 242 (374)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEE
Confidence 45567788775555 4699999999999999984333332 245677778889997544
No 192
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.05 E-value=16 Score=30.01 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=39.9
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
.+...+.+|.+ |+..++|..|...+..++.+ |.+++++. .+..|++..+.+|++.+.-..+
T Consensus 156 l~~~~~~~g~~-VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~---~~~~r~~~~~~~Ga~~~i~~~~ 217 (348)
T 4eez_A 156 IKVSGVKPGDW-QVIFGAGGLGNLAIQYAKNVFGAKVIAVD---INQDKLNLAKKIGADVTINSGD 217 (348)
T ss_dssp HHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTSCCEEEEEE---SCHHHHHHHHHTTCSEEEEC-C
T ss_pred ecccCCCCCCE-EEEEcCCCccHHHHHHHHHhCCCEEEEEE---CcHHHhhhhhhcCCeEEEeCCC
Confidence 34445678877 44456677776666667665 66655543 3577888999999987765443
No 193
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=81.05 E-value=14 Score=29.16 Aligned_cols=32 Identities=13% Similarity=0.276 Sum_probs=26.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|-.|.+++......|.+++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999988888887766654
No 194
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=81.02 E-value=4.5 Score=33.05 Aligned_cols=53 Identities=26% Similarity=0.369 Sum_probs=39.0
Q ss_pred CCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 66 ITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 66 ~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+.++. +.+|...+|..|.+....|+.+|.+++++... ..+++.++.+|++-+.
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRIL 196 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 44432 44555566999999999999999987766643 4577778889997654
No 195
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=80.66 E-value=16 Score=28.53 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=44.2
Q ss_pred CCeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCC---EEEEeCCCCChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGN--TGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGA---QLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+..+|. -|.++|......|.+++++.........+.. .+..+. .++.+|-. +.++..+..+++.++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence 356688888877 9999999988899997776544333344333 334443 44444443 344555555555544
No 196
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=80.54 E-value=14 Score=28.33 Aligned_cols=25 Identities=20% Similarity=0.127 Sum_probs=21.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGY 94 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~ 94 (221)
+..+|+..+|..|.+++......|.
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAAR 27 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHhcC
Confidence 4568888889999999988887887
No 197
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.47 E-value=11 Score=29.91 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=25.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+..+|..|.+++......|.+++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 5678888889999999998888888766654
No 198
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=80.41 E-value=9.2 Score=31.63 Aligned_cols=61 Identities=16% Similarity=0.118 Sum_probs=43.8
Q ss_pred HHcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeC
Q 043209 61 EEKGLITPGKTVLIECTS---GNTGIGMACFAAAK-GYKLILVMPAF--MSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~ass---GN~~~alA~~a~~~-g~~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~ 123 (221)
++.|.+. |.+ |+..+- +|.++|+..++.++ |++++++.|+. .+..-++.++..|+++..+.
T Consensus 144 e~~g~l~-glk-va~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 144 REIGRID-GIK-IAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp HHHSCST-TCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HHhCCcC-CCE-EEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 3445443 344 444433 68999999999999 99999999985 45566667777888886654
No 199
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=80.39 E-value=9.2 Score=29.55 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=25.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888999999999988888987666543
No 200
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.35 E-value=12 Score=30.11 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=25.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999888888887666543
No 201
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=80.13 E-value=14 Score=31.20 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 51 RIAFSMIKDAEE-KGL-ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~-~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
|+..+.+..+.+ .|. -..|++ |+..+.||-|..+|..++.+|.+++ +... +..+.+..+.+|++.+
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~Gkt-V~I~G~GnVG~~~A~~l~~~GakVv-vsD~--~~~~~~~a~~~ga~~v 222 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLT-VLVQGLGAVGGSLASLAAEAGAQLL-VADT--DTERVAHAVALGHTAV 222 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCE-EEEECcCHHHHHHHHHHHHCCCEEE-EEeC--CccHHHHHHhcCCEEe
Confidence 466666666654 343 235555 8888999999999999999999877 4432 2333444455777644
No 202
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=80.08 E-value=20 Score=28.24 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
++||+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~~ 224 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDSR 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence 579999975 5677889999999987 379999998654
No 203
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=80.00 E-value=10 Score=29.53 Aligned_cols=74 Identities=9% Similarity=0.140 Sum_probs=49.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM-PAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-p~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+.++|-.|.++|......|.++++.. .... .......++..+.++..+..+ .+.++..+..+++.++.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 36678888889999999999988999887766 3332 234456677778777655432 23445555666666554
No 204
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.80 E-value=15 Score=28.80 Aligned_cols=33 Identities=30% Similarity=0.268 Sum_probs=26.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+++.+|+.++|..|.+++......|.+++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence 356788989999999999998888988766543
No 205
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=79.79 E-value=14 Score=29.36 Aligned_cols=71 Identities=17% Similarity=0.089 Sum_probs=47.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLN 140 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~ 140 (221)
++.+|+.++|--|.++|......|.+++++-... ......+.++..|.++..+..+ .+.++..+..++..+
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 6778888889999999999999999877766442 3445556677778877765433 123344444444433
No 206
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=79.57 E-value=21 Score=28.25 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=26.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+.++|.-|.+++......|.+++++..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 56788888899999999998888987766543
No 207
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=79.55 E-value=17 Score=28.96 Aligned_cols=32 Identities=13% Similarity=0.303 Sum_probs=25.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+..+|--|.++|......|.+++++..
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 56688888899999999888888887666553
No 208
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=79.40 E-value=24 Score=28.84 Aligned_cols=53 Identities=19% Similarity=0.070 Sum_probs=36.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC--CCCHHHHHHH----HHcCCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA--FMSLEKRIIL----QAYGAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~--~~~~~~~~~l----~~~Ga~V~~v 122 (221)
++.+|+.++|-.|.+++......|.++++.+.. ..+..+++.+ +..|.++..+
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~ 64 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEE
Confidence 567888889999999999999999988777643 3344443332 3345555444
No 209
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=79.36 E-value=15 Score=28.18 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=26.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+..+|..|.+++......|.+++++..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999988888887666653
No 210
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=79.31 E-value=21 Score=27.96 Aligned_cols=149 Identities=15% Similarity=0.116 Sum_probs=80.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCC-hHHHHHHHHHHHcCCeEEEEecCC---C-----CH-----HHHHHHHH--cCC
Q 043209 54 FSMIKDAEEKGLITPGKTVLIECTSG-NTGIGMACFAAAKGYKLILVMPAF---M-----SL-----EKRIILQA--YGA 117 (221)
Q Consensus 54 ~~~~~~a~~~g~~~~g~~~vv~assG-N~~~alA~~a~~~g~~~~ivvp~~---~-----~~-----~~~~~l~~--~Ga 117 (221)
...+..+.+++. ..||..... .........+...|++++.+-... . .. .-.+.+.. .|-
T Consensus 51 ~~~~~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~ 125 (291)
T 3l49_A 51 VSQIQTLIAQKP-----DAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGK 125 (291)
T ss_dssp HHHHHHHHHHCC-----SEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC-----CEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCC
Confidence 334555556653 335554432 344445555666788877663221 1 01 11233444 554
Q ss_pred -EEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCC---CCCccHHHHHhhHHHHHHHhhCC---CCCEEEEccCchh
Q 043209 118 -QLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQF---KNPANPKTHYETTGPEIWEGTRG---QVDIFVSGIGTGG 187 (221)
Q Consensus 118 -~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~---~n~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~p~G~Gg 187 (221)
+|.++.+..+.. ++.+-.++..++.++.-.+... ......+.+ .....+++++- + ++|+|||. +..
T Consensus 126 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~~~~~ai~~~--~d~ 201 (291)
T 3l49_A 126 GNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSA-YSNVTDMLTKY-PNEGDVGAIWAC--WDV 201 (291)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHH-HHHHHHHHHHC-CSTTSCCEEEES--SHH
T ss_pred ceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHH-HHHHHHHHHhC-CCcCCcCEEEEC--CCc
Confidence 555564432222 2333334555555333222211 112233323 34566677665 4 79999864 667
Q ss_pred HHHHHHHHHHhcCC-CcEEEEEeCC
Q 043209 188 TVSGVGNFLKKKNP-EIKVYGVEPA 211 (221)
Q Consensus 188 ~~~Gi~~~~~~~~~-~~kvigVe~~ 211 (221)
.+.|+..++++.+. ++.|+|++..
T Consensus 202 ~a~g~~~al~~~g~~di~vvg~d~~ 226 (291)
T 3l49_A 202 PMIGATQALQAAGRTDIRTYGVDGS 226 (291)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEECC
T ss_pred hHHHHHHHHHHcCCCCeEEEEecCC
Confidence 88999999999875 8999999754
No 211
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=79.12 E-value=9.3 Score=31.76 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=38.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
....+.+|++.+|... |..|..++..|+.+|.+++++... ..+++.++.+|++.+.
T Consensus 173 ~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 173 VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI 228 (360)
T ss_dssp HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence 3356778877555555 999999999999999985555433 3345566678887554
No 212
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=78.97 E-value=21 Score=27.82 Aligned_cols=37 Identities=8% Similarity=-0.051 Sum_probs=30.0
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
+++|+||| .+..++.|+..++++.+ .++.|+|.+...
T Consensus 180 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d~~~ 220 (276)
T 3jy6_A 180 DQKTVAFA--LKERWLLEFFPNLIISGLIDNQTVTATGFADTD 220 (276)
T ss_dssp SSCEEEEE--SSHHHHHHHSHHHHHSSSCCSSSEEEEEBCCCS
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHHcCCCCCCcEEEEEECChH
Confidence 67999997 56778889999999987 368899987654
No 213
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=78.97 E-value=12 Score=29.38 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=19.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGY 94 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~ 94 (221)
+..+|+.++|--|.++|......|.
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~ 27 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDK 27 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCchHHHHHHHHHHhcCC
Confidence 5668888889899999887766653
No 214
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=78.67 E-value=22 Score=27.91 Aligned_cols=32 Identities=9% Similarity=0.157 Sum_probs=26.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++..+|+.+++--|.++|......|.+++++-
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCA 39 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 36678888889999999999888898866554
No 215
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=78.42 E-value=8.5 Score=32.12 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=40.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+...+.+|.+.+|.. +|..|...+..|+.+|.+-++.+. .+..+++.++.+|++.+.
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVD--INKDKFARAKEFGATECI 240 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHHTCSEEE
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCceEe
Confidence 455677887755554 699999999999999984333332 245667777889987544
No 216
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=78.41 E-value=9.7 Score=29.79 Aligned_cols=70 Identities=11% Similarity=0.104 Sum_probs=43.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHH
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKG---YKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELL 139 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g---~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~ 139 (221)
++.+|+..+|..|.+++......| .+++++.........++.+...+.++..+..+ .+.++..+...++.
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 567888888999999999998888 88777765543333455555446566554332 12334444444443
No 217
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=78.22 E-value=12 Score=31.08 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=42.4
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
+.|.+. |.+..+..-.+|.++|+..++.++|++++++.|+.. +...++.++ ..|+++..+..
T Consensus 149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d 216 (315)
T 1pvv_A 149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHD 216 (315)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 445443 444333344499999999999999999999999863 333334343 78888877643
No 218
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=78.06 E-value=23 Score=27.78 Aligned_cols=44 Identities=9% Similarity=0.233 Sum_probs=32.2
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
.+++++ .+++|+||| .+..++.|+..++++.+ .++.|+|++...
T Consensus 178 ~~~l~~-~~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 225 (291)
T 3egc_A 178 IKVLTG-ADRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNLP 225 (291)
T ss_dssp HHHHTC--CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCCG
T ss_pred HHHHhC-CCCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCch
Confidence 344433 257999996 56677889999999987 379999997543
No 219
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=77.89 E-value=24 Score=27.86 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=43.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE--EeCCCCChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI--LTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~--~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++..+|+.++|--|.++|......|.+++++-.......... +.+|.++. .+|-. +.++..+...+..++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA--ASVGRGAVHHVVDLT-NEVSVRALIDFTIDT 82 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH--HHHCTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--HHhCCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 367789999999999999999999998777654433333222 23354444 44433 344455555555444
No 220
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=77.72 E-value=23 Score=27.56 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=55.4
Q ss_pred HHHHHcCC-EEEEeCCCCCh-hHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchh
Q 043209 110 IILQAYGA-QLILTNAEMGI-DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187 (221)
Q Consensus 110 ~~l~~~Ga-~V~~v~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg 187 (221)
+.+...|. +|.++...... .++.+-.++..++.+-.............+.++ ....+++++- +++|+||+. +..
T Consensus 111 ~~L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~ai~~~--~d~ 186 (280)
T 3gyb_A 111 KHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGY-TETLALLKEH-PEVTAIFSS--NDI 186 (280)
T ss_dssp HHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHH-HHHHHHHHHC-TTCCEEEES--SHH
T ss_pred HHHHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHH-HHHHHHHhCC-CCCCEEEEC--ChH
Confidence 34555564 46566554222 223333344445542111111122233344343 4556666664 679999975 567
Q ss_pred HHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 188 TVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 188 ~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
++.|+..++++.+ .++.|+|.+-.
T Consensus 187 ~a~g~~~al~~~g~~vP~di~vvg~d~~ 214 (280)
T 3gyb_A 187 TAIGALGAARELGLRVPEDLSIIGYDNT 214 (280)
T ss_dssp HHHHHHHHHHHHTCCTTTTCEEEEESCC
T ss_pred HHHHHHHHHHHcCCCCCCeeEEEEECCc
Confidence 8889999999987 37899998754
No 221
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=77.63 E-value=13 Score=30.52 Aligned_cols=55 Identities=20% Similarity=0.263 Sum_probs=40.3
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 65 LITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 65 ~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
.+.+|.+.+|. ++|..|.+....|+.+ +.+++++. .+..+++.++.+|++.+...
T Consensus 168 ~~~~g~~vlv~-GaG~vG~~a~qla~~~g~~~Vi~~~---~~~~~~~~~~~lGa~~~i~~ 223 (345)
T 3jv7_A 168 LLGPGSTAVVI-GVGGLGHVGIQILRAVSAARVIAVD---LDDDRLALAREVGADAAVKS 223 (345)
T ss_dssp GCCTTCEEEEE-CCSHHHHHHHHHHHHHCCCEEEEEE---SCHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCCEEEcC
Confidence 46677775555 5599999999999998 55554443 36788899999999876543
No 222
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.62 E-value=9.8 Score=31.88 Aligned_cols=54 Identities=28% Similarity=0.238 Sum_probs=38.6
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
..+.+|.+.+|. ++|..|.+++..|+.+|.+++++.. +..+++.++.+|++.+.
T Consensus 190 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 190 WQAGPGKKVGVV-GIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV 243 (369)
T ss_dssp TTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence 357788775555 5688999999999999998544443 34566677778987554
No 223
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=77.53 E-value=11 Score=29.55 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++|--|.+++..-...|.+++++...
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 566888888999999998888889887776543
No 224
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=77.31 E-value=24 Score=27.59 Aligned_cols=45 Identities=16% Similarity=0.082 Sum_probs=32.9
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
...+++++- +++|+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 182 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~~ 230 (292)
T 3k4h_A 182 AVEELMGLQ-QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFNNA 230 (292)
T ss_dssp HHHHHHTSS-SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred HHHHHHcCC-CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEecCc
Confidence 334444442 579999965 5677889999999987 46889998754
No 225
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=76.88 E-value=16 Score=28.56 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=45.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+..+|..|.+++......|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3667889999999999999998899987766533211 12234455567777665433 1333444444554444
No 226
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=76.75 E-value=18 Score=29.02 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=55.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCCC-HHHHHHHH-HcCCEEEEeCCCC-ChhHHHHHHHHHHhhCCCe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM-PAFMS-LEKRIILQ-AYGAQLILTNAEM-GIDEEFRIVEELLNKIPTS 145 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv-p~~~~-~~~~~~l~-~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~~~~ 145 (221)
+..+|+..+|-.|.+++......|.+++++. ..... ....+.++ ..|.++..+..+- +.++....+ .+ +
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~----~~--~- 82 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG----AD--G- 82 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-----------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccc----cc--c-
Confidence 5668888889999999999888898877665 32111 11122333 4566665543221 111000000 00 1
Q ss_pred eecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCch
Q 043209 146 FNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186 (221)
Q Consensus 146 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~G 186 (221)
..+.........+..++.+++ +.+|.+|..+|..
T Consensus 83 ------~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 116 (291)
T 1e7w_A 83 ------SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF 116 (291)
T ss_dssp ------CCCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred ------ccccchHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 111111113345556677777 5799999999853
No 227
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=76.31 E-value=14 Score=32.07 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=48.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+.++|-.|.++|..-...|.+++++-.........+..+..+.+++.++-. +.++..+...+..++.
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 367788888899999999998888998665543322233334456678888887754 3445555555555554
No 228
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=76.13 E-value=25 Score=27.28 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=24.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+..+|..|.+++......|.+++++.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 37 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSD 37 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5668888889999999998888888765553
No 229
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=75.82 E-value=10 Score=31.48 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=43.3
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeC
Q 043209 62 EKGLITPGKTVLIECTS---GNTGIGMACFAAAK-GYKLILVMPAF--MSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 62 ~~g~~~~g~~~vv~ass---GN~~~alA~~a~~~-g~~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~ 123 (221)
+.|.+. |.+ |+..+- +|.++|++.++.++ |++++++.|+. .+...++.++..|+++..+.
T Consensus 148 ~~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 148 TQGRLD-NLH-VAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HHSCSS-SCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred HhCCcC-CcE-EEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 345443 344 444444 69999999999999 99999999985 34455567778888876654
No 230
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=75.67 E-value=18 Score=29.69 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=55.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCCC-HHHHHHHH-HcCCEEEEeCCCC-ChhHHHHHHHHHHhhCCCe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM-PAFMS-LEKRIILQ-AYGAQLILTNAEM-GIDEEFRIVEELLNKIPTS 145 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv-p~~~~-~~~~~~l~-~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~~~~ 145 (221)
+..+|+.++|-.|.+++......|.+++++. ..... ....+.++ ..|.++..+..+- +.+...... .+ +
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~----~~--~- 119 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG----AD--G- 119 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc----cc--c-
Confidence 5678888889999999999888999877765 32111 11122333 4566665543321 111000000 00 1
Q ss_pred eecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCch
Q 043209 146 FNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186 (221)
Q Consensus 146 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~G 186 (221)
+ .+.........+..++.+++ +.+|.+|..+|..
T Consensus 120 ----~--~~~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 120 ----S--APVTLFTRCAELVAACYTHW-GRCDVLVNNASSF 153 (328)
T ss_dssp -------CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred ----c--cccccHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 0 11111113445666777777 5799999999853
No 231
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=75.55 E-value=27 Score=27.37 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=34.1
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
...+++++- +++|+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 178 ~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~~~ 227 (288)
T 3gv0_A 178 FGQRLMQSS-DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQSAE 227 (288)
T ss_dssp HHHHHTTSS-SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEESST
T ss_pred HHHHHHhCC-CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecChH
Confidence 444555443 569999964 5677889999999987 478999998654
No 232
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=75.44 E-value=25 Score=26.84 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=25.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+..+|..|.+++......|.+++++.
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 4568888889999999988888888776663
No 233
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=75.38 E-value=16 Score=28.85 Aligned_cols=91 Identities=8% Similarity=0.068 Sum_probs=52.1
Q ss_pred CEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHH
Q 043209 117 AQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193 (221)
Q Consensus 117 a~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~ 193 (221)
-+|.++.+..+.. ++.+-.++..++.++.-........+..+.++ ....+++++- ++||+|||. +..++.|+.
T Consensus 134 ~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~g~~~~~~~~~~~~~~~~~-~~~~~ll~~~-~~~~ai~~~--nD~~A~g~~ 209 (288)
T 1gud_A 134 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKAL-DVATNVLQRN-PNIKAIYCA--NDTMAMGVA 209 (288)
T ss_dssp EEEEEEECSTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC-TTCCEEEES--SHHHHHHHH
T ss_pred CEEEEEeCCCCCchHhHHHHHHHHHHHhCCCcEEEEeecCCccHHHHH-HHHHHHHHhC-CCceEEEEC--CCchHHHHH
Confidence 4666665432222 23333344445443432111111223344354 3456666654 569999975 567889999
Q ss_pred HHHHhcC--CCcEEEEEeCC
Q 043209 194 NFLKKKN--PEIKVYGVEPA 211 (221)
Q Consensus 194 ~~~~~~~--~~~kvigVe~~ 211 (221)
.++++.+ .++.|+|.+-.
T Consensus 210 ~al~~~G~~~dv~vvGfD~~ 229 (288)
T 1gud_A 210 QAVANAGKTGKVLVVGTDGI 229 (288)
T ss_dssp HHHHHTTCTTTSEEEEESCC
T ss_pred HHHHhcCCCCCeEEEEeCCC
Confidence 9999886 36999999754
No 234
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=75.13 E-value=32 Score=27.91 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=51.4
Q ss_pred CEEEEeCCCCCh---hHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHH
Q 043209 117 AQLILTNAEMGI---DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193 (221)
Q Consensus 117 a~V~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~ 193 (221)
.+|..+.+..+. .++.+-.++..++.+...........+..+.++ ....+++++- +++|+||+. +...+.|+.
T Consensus 146 ~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~~~-~~~~aI~~~--~d~~a~g~~ 221 (350)
T 3h75_A 146 IELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYGEWNRERAY-RQAQQLLKRY-PKTQLVWSA--NDEMALGAM 221 (350)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC-TTEEEEEES--SHHHHHHHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeCCCcHHHHH-HHHHHHHHhC-CCcCEEEEC--ChHHHHHHH
Confidence 467666543222 233333455555653211110111122344343 4556666664 578998874 567788999
Q ss_pred HHHHhcC----CCcEEEEEeCC
Q 043209 194 NFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 194 ~~~~~~~----~~~kvigVe~~ 211 (221)
.++++.+ .++.|+|++..
T Consensus 222 ~al~~~G~~vP~di~vvg~d~~ 243 (350)
T 3h75_A 222 QAARELGRKPGTDLLFSGVNSS 243 (350)
T ss_dssp HHHHHTTCCBTTTBEEEEESCC
T ss_pred HHHHHcCCCCCCCeEEEecCCC
Confidence 9999987 26999998754
No 235
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.03 E-value=15 Score=25.72 Aligned_cols=49 Identities=27% Similarity=0.323 Sum_probs=38.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++..+.|..|.+++......|.+++++-. +..+.+.++..|.+++..+.
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd~ 57 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIADP 57 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECCT
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECCC
Confidence 66677799999999999999998877753 46677777778887776554
No 236
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=75.00 E-value=12 Score=30.17 Aligned_cols=54 Identities=17% Similarity=0.050 Sum_probs=39.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCC
Q 043209 71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+.+|+..+|..|.+++......|.+++++..... ....+..+...|++++..+-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 4578888899999999998888998888875532 33444445566777766553
No 237
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=74.98 E-value=28 Score=27.17 Aligned_cols=37 Identities=14% Similarity=0.296 Sum_probs=29.0
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
+++|+|||. +...+.|+..++++.+ .++.|+|.+...
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 239 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDDIA 239 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESCCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecCch
Confidence 568999975 5677889999999876 368899998654
No 238
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=74.74 E-value=24 Score=27.87 Aligned_cols=73 Identities=15% Similarity=0.196 Sum_probs=48.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+..+|+.++|--|.++|......|.++++....... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 677899999999999999998899988876544322 23345567778877765433 13444555555555543
No 239
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=74.73 E-value=19 Score=28.22 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=48.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+.++|--|.++|......|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3677888899999999999999999988777544322 23345566677766655432 13444555555555543
No 240
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=74.53 E-value=30 Score=27.37 Aligned_cols=158 Identities=5% Similarity=0.035 Sum_probs=84.0
Q ss_pred chhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH--HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 47 SVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG--MACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 47 s~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a--lA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.|=.+....+-..+.+.|. ..++..+..+.... +.......++..+|++|...+...++.++..|--|+.++.
T Consensus 40 ~~~~~~~~gi~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 114 (305)
T 3huu_A 40 PFNSDVLNGINQACNVRGY-----STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGK 114 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTC-----EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESC
T ss_pred cHHHHHHHHHHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECC
Confidence 3444555555566677773 43443333433322 2222344578888888765555667777888888888764
Q ss_pred CC----------ChhHHHH-HHHHHHhhCC-CeeecCCCCCCcc---HHHHHhhH------------------HHHHHHh
Q 043209 125 EM----------GIDEEFR-IVEELLNKIP-TSFNPHQFKNPAN---PKTHYETT------------------GPEIWEG 171 (221)
Q Consensus 125 ~~----------~~~~~~~-~a~~~~~~~~-~~~~~~~~~n~~~---~~~g~~t~------------------~~Ei~~q 171 (221)
.. +...... .++.+.+... ...++....+... ...||... +.+..++
T Consensus 115 ~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 194 (305)
T 3huu_A 115 SLNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQ 194 (305)
T ss_dssp CCSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC--
T ss_pred CCcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHH
Confidence 31 1112223 3333333221 1223322111110 01122211 3333333
Q ss_pred h----CCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 172 T----RGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 172 ~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
+ .++||+||| .+..++.|+..++++.+ .++.|+|.+..
T Consensus 195 ~~l~~~~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D~~ 240 (305)
T 3huu_A 195 YCIDASHMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFNTS 240 (305)
T ss_dssp ------CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESCS
T ss_pred hhhcCCCCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEECCc
Confidence 3 357999997 46778889999999987 36899999754
No 241
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=74.37 E-value=13 Score=29.99 Aligned_cols=31 Identities=39% Similarity=0.317 Sum_probs=22.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCC---eEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGY---KLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~---~~~ivv 100 (221)
++.+|+.++|.-|.++|......|. ++++..
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEE
Confidence 5678888889999999887766665 444443
No 242
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=74.35 E-value=28 Score=26.94 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=25.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|--|.+++......|.+++++-
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 33 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID 33 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 5668888899999999988888888766653
No 243
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=74.19 E-value=14 Score=31.10 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=41.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHH----HHcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIIL----QAYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l----~~~Ga~V~~v~~ 124 (221)
+.|.+. |.+..++.-.+|.++|+..++.++|++++++.|+. .+..-++.+ +..|+.+..+..
T Consensus 173 ~~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d 240 (340)
T 4ep1_A 173 ETNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHN 240 (340)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESC
T ss_pred HhCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 445443 44544445558999999999999999999999985 233333333 367777766543
No 244
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=74.10 E-value=28 Score=26.81 Aligned_cols=57 Identities=21% Similarity=0.165 Sum_probs=41.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~ 125 (221)
+++.+|+.++|--|.+++......|.+++++...... ....+.++..+.++..+..+
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 65 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecC
Confidence 4677888888999999999999999988776544322 23455677788888776543
No 245
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=74.05 E-value=24 Score=27.43 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=38.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++..+|+.++|--|.++|......|.+++++......... ..+.++.++..+..+ .+.++..+..++..++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE--PAAELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3677889999999999999999999987776644322211 122335555544322 1344445555555444
No 246
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=74.04 E-value=15 Score=30.26 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=37.9
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 65 LITPGKTVLIECTSGNTGIGMACFAAAK--GYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 65 ~~~~g~~~vv~assGN~~~alA~~a~~~--g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
.+ +|.+.+|... |..|.+.+..|+.+ |.+++++. .+..+++.++.+|++.+.
T Consensus 168 ~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGIS---RSKKHRDFALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEEC---SCHHHHHHHHHHTCSEEE
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEe---CCHHHHHHHHHhCCCEEe
Confidence 45 7777555554 99999999999999 98743332 357788888889986543
No 247
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=74.01 E-value=21 Score=27.99 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=48.7
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH----HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEK----RIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~----~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
++..+|+.+++--|.++|......|.+++++.....+..+ .+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667888888999999999988889988776543333332 34556668888766543 23445555555555553
No 248
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=73.95 E-value=18 Score=29.22 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=47.7
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKR-IILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~-~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
|+..||+.+++--|+++|......|.++++.-. +..++ +..+.+|.++..+..+ .+.++..+...+..++.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r---~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGR---RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467799999999999999999999998766543 23333 3345667766654332 24556666666666654
No 249
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=73.90 E-value=28 Score=26.78 Aligned_cols=148 Identities=10% Similarity=0.006 Sum_probs=77.4
Q ss_pred HHHHHHHHcC-CCCCCCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecC---C-C------CH-----HHHHHHHHc--
Q 043209 55 SMIKDAEEKG-LITPGKTVLIECTS-GNTGIGMACFAAAKGYKLILVMPA---F-M------SL-----EKRIILQAY-- 115 (221)
Q Consensus 55 ~~~~~a~~~g-~~~~g~~~vv~ass-GN~~~alA~~a~~~g~~~~ivvp~---~-~------~~-----~~~~~l~~~-- 115 (221)
..+..+.+++ . . .|+..+. ..........+...|++++.+-.. . . .. .-.+.+...
T Consensus 49 ~~i~~l~~~~~v----d-gii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~ 123 (276)
T 3ksm_A 49 QILSYHLSQAPP----D-ALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLD 123 (276)
T ss_dssp HHHHHHHHHSCC----S-EEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCC----C-EEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcC
Confidence 3445555555 3 2 2454442 223334444556678888776311 1 0 11 112334444
Q ss_pred --CC-EEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH
Q 043209 116 --GA-QLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV 189 (221)
Q Consensus 116 --Ga-~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~ 189 (221)
|- +|.++....+.. ++.+-.++..++.++.-........+..+.++ ....+++++- +++|+||+. +..++
T Consensus 124 ~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~ai~~~--~d~~a 199 (276)
T 3ksm_A 124 LSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAAR-SEMLRLLKET-PTIDGLFTP--NESTT 199 (276)
T ss_dssp TTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHH-HHHHHHHHHC-SCCCEEECC--SHHHH
T ss_pred cCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEEEEecCCCcHHHHH-HHHHHHHHhC-CCceEEEEC--Cchhh
Confidence 44 455554332222 23333344455543433222222223343343 4555666654 579999875 56788
Q ss_pred HHHHHHHHhcC--CCcEEEEEeCC
Q 043209 190 SGVGNFLKKKN--PEIKVYGVEPA 211 (221)
Q Consensus 190 ~Gi~~~~~~~~--~~~kvigVe~~ 211 (221)
.|+..++++.+ .++.|+|.+..
T Consensus 200 ~g~~~al~~~g~p~di~vig~d~~ 223 (276)
T 3ksm_A 200 IGALVAIRQSGMSKQFGFIGFDQT 223 (276)
T ss_dssp HHHHHHHHHTTCTTSSEEEEESCC
T ss_pred hHHHHHHHHcCCCCCeEEEEeCCC
Confidence 89999999987 47999998764
No 250
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=73.87 E-value=21 Score=27.42 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=38.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~ 124 (221)
++.+|+.++|..|.+++......|.+++++...+.. ....+.++..|.++..+..
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 62 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEES
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 567888899999999999999999987776433222 2234456667877766543
No 251
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=73.50 E-value=3.9 Score=30.90 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=26.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|+.-++|-.|.++|+..++.|++++||=.
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 88889999999999999999999988853
No 252
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=73.44 E-value=34 Score=27.54 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=32.9
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
.+++++ .++||+||| .+..++.|+..++++.+ .++.|+|.+...
T Consensus 234 ~~ll~~-~~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vvg~D~~~ 281 (338)
T 3dbi_A 234 EMLLER-GAKFSALVA--SNDDMAIGAMKALHERGVAVPEQVSVIGFDDIA 281 (338)
T ss_dssp HHHHHT-TCCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESCCT
T ss_pred HHHHcC-CCCCeEEEE--CChHHHHHHHHHHHHcCCCCCCCeEEEEECChH
Confidence 344443 357999997 45677889999999987 378999998553
No 253
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=73.41 E-value=44 Score=28.73 Aligned_cols=100 Identities=11% Similarity=0.053 Sum_probs=58.5
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH--HHHHHHHcCCeEEEEecCCCC-------------
Q 043209 41 MMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG--MACFAAAKGYKLILVMPAFMS------------- 105 (221)
Q Consensus 41 ~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a--lA~~a~~~g~~~~ivvp~~~~------------- 105 (221)
..+|.|+.+.. ...+....+++.+..++..+|+.+++-.|.+ ++......|.+++++......
T Consensus 34 ~~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~ 111 (418)
T 4eue_A 34 DVHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN 111 (418)
T ss_dssp CCCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred cCCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence 45666765432 2334455566666667887888888888888 444444448887776533211
Q ss_pred HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 106 LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
....+.++..|.++..+..+ .+.++..+.++++.++.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 22233456788877665433 13445555666666655
No 254
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=73.09 E-value=33 Score=27.16 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=29.1
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
+++|+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~ 235 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGINTT 235 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEcCh
Confidence 569999975 5677889999999987 37899998754
No 255
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=72.66 E-value=17 Score=29.95 Aligned_cols=61 Identities=18% Similarity=0.205 Sum_probs=41.7
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
+.|.+. |.+ |+..+- +|.++|+..++.++|++++++.|+.. +...++.++ ..|+++..+..
T Consensus 142 ~~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d 210 (307)
T 2i6u_A 142 RKGALR-GLR-LSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTAD 210 (307)
T ss_dssp HHSCCT-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HhCCcC-CeE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEEC
Confidence 445443 344 444444 69999999999999999999999863 333333333 77888776643
No 256
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.50 E-value=18 Score=29.56 Aligned_cols=55 Identities=20% Similarity=0.092 Sum_probs=38.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHH---HHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRI---ILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~---~l~~~Ga~V~~v~~ 124 (221)
++.+|+.++|..|.+++......|.+++++.... ....+.. .++..|.+++..+-
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl 69 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence 3568888899999999999988899988888543 2333332 34445666655543
No 257
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=72.49 E-value=18 Score=30.20 Aligned_cols=61 Identities=13% Similarity=0.105 Sum_probs=41.8
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHH----HcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
+.|.+. |.+ |+..+- +|.+.|+..++.++|++++++.|+. .+...++.++ ..|+++..+..
T Consensus 161 ~~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 229 (325)
T 1vlv_A 161 NFGRLK-GVK-VVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSN 229 (325)
T ss_dssp HHSCST-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESC
T ss_pred HhCCcC-CcE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 445443 344 444444 6999999999999999999999985 2333334343 78888877654
No 258
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=72.36 E-value=13 Score=30.95 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=41.9
Q ss_pred HcCCCC-----CCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLIT-----PGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~-----~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+...+. +|.+.+|...+|..|.+.+..|+.+ |.+++++. .+..+++.++.+|++.+..
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~---~~~~~~~~~~~lGad~vi~ 223 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATA---SRPETQEWVKSLGAHHVID 223 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEEC---SSHHHHHHHHHTTCSEEEC
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEe---CCHHHHHHHHHcCCCEEEe
Confidence 444555 6666566666899999999999974 77655554 3467888889999976653
No 259
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=72.34 E-value=5.7 Score=31.51 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=27.7
Q ss_pred CeEEEeeC----------------CChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECT----------------SGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~as----------------sGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+++ ||-.|.++|.++...|.+++++..
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~ 51 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITT 51 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56677777 899999999999999999988873
No 260
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=72.33 E-value=8.5 Score=30.14 Aligned_cols=52 Identities=15% Similarity=0.079 Sum_probs=37.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+.+|+.++|--|.+++......|.+++++............++..|.++..+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 54 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM 54 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE
Confidence 4588888899999999999999998776654333333333366667777766
No 261
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=72.17 E-value=21 Score=28.23 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=44.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++..+|+..+|..|.+++......|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3667889999999999999999999987666533211 12234455567766654332 1334444444444444
No 262
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=72.17 E-value=8.8 Score=30.62 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=37.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CH-HHH---HHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-M--SL-EKR---IILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~--~~-~~~---~~l~~~Ga~V~~v~~ 124 (221)
++.+|+..+|..|.+++......|.+++++.... . .+ .+. ..+...|++++..+-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 3457888889999999998888898888877543 1 12 332 234456777776654
No 263
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=72.10 E-value=8.6 Score=31.84 Aligned_cols=62 Identities=23% Similarity=0.194 Sum_probs=44.3
Q ss_pred HHcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHHHcCCEEEEeCC
Q 043209 61 EEKGLITPGKTVLIECTS---GNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~ass---GN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++.|.+. |.+ |+..+- +|.++|+..++.++|++++++.|+. .+...++.++..|+++..+..
T Consensus 148 e~~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d 214 (308)
T 1ml4_A 148 KEFGRID-GLK-IGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTT 214 (308)
T ss_dssp HHSSCSS-SEE-EEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC
T ss_pred HHhCCCC-CeE-EEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcC
Confidence 3456443 333 555544 6899999999999999999999985 344456667788888766543
No 264
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=72.08 E-value=35 Score=27.05 Aligned_cols=46 Identities=13% Similarity=0.228 Sum_probs=34.6
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC--CcEEEEEeC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP--EIKVYGVEP 210 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~--~~kvigVe~ 210 (221)
....+++++.++++|+|||. +..++.|+..++++.+. ++.|+|++.
T Consensus 176 ~~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 176 KIMENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp HHHHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred HHHHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecCC
Confidence 45556666543579999986 56778899999999874 688998874
No 265
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=72.00 E-value=18 Score=27.96 Aligned_cols=68 Identities=6% Similarity=0.074 Sum_probs=40.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEE--EeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL-QAYGAQLI--LTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l-~~~Ga~V~--~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|--|.++|......|.+++++... ..+++.+ +.++.++. .+|-. +.++..+..++..++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 74 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR---YQRLQQQELLLGNAVIGIVADLA-HHEDVDVAFAAAVEW 74 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCceEEECCCC-CHHHHHHHHHHHHHh
Confidence 566889999999999999999999987666433 2332222 22233344 44433 344444445555443
No 266
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=71.97 E-value=34 Score=26.90 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=34.6
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-----CCcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-----PEIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-----~~~kvigVe~~ 211 (221)
....+++++- +++|+||+. +..++.|+..++++.+ .++.|+|++..
T Consensus 177 ~~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D~~ 227 (297)
T 3rot_A 177 SRVKSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFDKT 227 (297)
T ss_dssp HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEECCC
T ss_pred HHHHHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeCCC
Confidence 4455666654 679999974 4677889999999876 37999999763
No 267
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=71.83 E-value=12 Score=28.67 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=39.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC-EEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGA-QLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga-~V~~v~~ 124 (221)
++.+|+..+|..|.+++......|.+++++.... .+...+...+. +++..+-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 5678888999999999999999999988887543 23444555677 7766554
No 268
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=71.80 E-value=20 Score=28.00 Aligned_cols=71 Identities=14% Similarity=0.103 Sum_probs=43.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLN 140 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~ 140 (221)
+..+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 567888888999999999998899887766533111 122344555677776654331 23344444444443
No 269
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=71.61 E-value=24 Score=31.18 Aligned_cols=60 Identities=17% Similarity=0.067 Sum_probs=44.1
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCC---------------CHHHHHHHHHcCCEEEEeCCC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-PAFM---------------SLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-p~~~---------------~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
+.++++.+|+.++|-.|.++|..-...|.+.++++ ..+. ....++.++..|++|..+..+
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D 323 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD 323 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence 44567778888899999999988888899866665 4331 234566788889999876544
No 270
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=71.46 E-value=20 Score=29.64 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=39.6
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
.+...+.+|++.+|. ++|..|.+....|+.+|.+.++.+. .+..+++.++.++.+++
T Consensus 172 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 172 LQRAGVRLGDPVLIC-GAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEICPEVV 228 (363)
T ss_dssp HHHHTCCTTCCEEEE-CCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHHCTTCE
T ss_pred HHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhchhcc
Confidence 344557788775565 5599999999999999998454442 35677777777743444
No 271
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=71.41 E-value=33 Score=26.51 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=42.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLN 140 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~ 140 (221)
+++.+|+.++|..|.+++......|.+++++.......... .+.++.++..+..+- +.++..+...++.+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--AKKLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--HHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH--HHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 36778888999999999999988999877776543332222 233466565544321 23333444444433
No 272
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=71.31 E-value=19 Score=28.03 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=43.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLN 140 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~ 140 (221)
+++.+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3667888889999999999998899987766543211 12234455567766654332 123334444444433
No 273
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.25 E-value=16 Score=28.42 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=42.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEE--EEeCCCCChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQL--ILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V--~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++..+|+.++|--|.++|......|.+++++... ..+.+. .+.++.++ +.++-. +.++..+..++..++
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATS---ESGAQAISDYLGDNGKGMALNVT-NPESIEAVLKAITDE 80 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHGGGEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcccceEEEEeCC-CHHHHHHHHHHHHHH
Confidence 3677888888999999999998999987766533 222222 22333333 444433 344555555555554
No 274
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=71.03 E-value=18 Score=28.16 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=44.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|..|.+++......|.+++++...+.. ....+.++..|.++..+..+- +.++..+..++..++
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567888889999999999998899987776652211 122344566687776654431 233333344444433
No 275
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=70.94 E-value=22 Score=27.55 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=44.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|..|.+++......|.+++++...+.. ....+.++..+.++..+..+- +.++..+..+++.++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 566888888999999999988899987776542211 122344556687776654331 233444444444443
No 276
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=70.75 E-value=38 Score=26.87 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=25.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|--|.++|......|.++++.-
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~ 56 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNG 56 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5678888889999999999888898766553
No 277
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=70.50 E-value=21 Score=27.87 Aligned_cols=71 Identities=14% Similarity=0.144 Sum_probs=44.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKR-IILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~-~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+.++|--|.+++......|.+++++-.. ..+. +..+.++.++..+..+ .+.++..+...+..++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3667888899999999999999999987665432 3332 2334456655554332 13444555555555554
No 278
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=70.20 E-value=18 Score=30.23 Aligned_cols=52 Identities=21% Similarity=0.163 Sum_probs=37.6
Q ss_pred EEeeCC--ChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHH----HcCCEEEEeCC
Q 043209 73 LIECTS--GNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 73 vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
|+..+- .|.+.|+..++.++|++++++.|+. .+...++.++ ..|+++..+..
T Consensus 158 va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 217 (335)
T 1dxh_A 158 YAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED 217 (335)
T ss_dssp EEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred EEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 444444 5999999999999999999999985 3333334333 67887776643
No 279
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=70.13 E-value=16 Score=28.66 Aligned_cols=46 Identities=13% Similarity=0.263 Sum_probs=34.2
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~ 211 (221)
....+++++- +++|+||+. +..++.|+..++++.+ .++.|+|++..
T Consensus 180 ~~~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d~~ 226 (290)
T 2fn9_A 180 KVTEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFDGA 226 (290)
T ss_dssp HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCBCC
T ss_pred HHHHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeCCC
Confidence 3455666653 579999974 5667889999999887 48899988753
No 280
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=70.09 E-value=35 Score=26.30 Aligned_cols=68 Identities=21% Similarity=0.133 Sum_probs=43.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL-QAYGAQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l-~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|..|.+++......|.+++++... ..+.+.+ +..|+.++.++-. +.++..+..++..++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALAH 74 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC-CHHHHHHHHHHHHHH
Confidence 567899999999999999998899987776533 3343332 3347666666654 334444444444443
No 281
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=69.99 E-value=19 Score=29.75 Aligned_cols=56 Identities=16% Similarity=0.203 Sum_probs=39.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKG-YKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g-~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+...+.+|.+.+|...+|..|.+.+..|+.+| .+++... +..+.+.++ +|++.+..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 55678888886666666999999999999885 4444443 234566666 88876554
No 282
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=69.99 E-value=19 Score=30.15 Aligned_cols=52 Identities=27% Similarity=0.250 Sum_probs=37.7
Q ss_pred EEeeCC--ChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHH----HcCCEEEEeCC
Q 043209 73 LIECTS--GNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 73 vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
|+..+- .|.+.|+..++.++|++++++.|+. .+...++.++ ..|+++..+..
T Consensus 158 ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 217 (333)
T 1duv_G 158 LVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED 217 (333)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred EEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEEC
Confidence 444444 5999999999999999999999985 3333334333 78888877643
No 283
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=69.61 E-value=39 Score=26.70 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=43.9
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YG-AQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~G-a~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+ |.-|.+++......|.+++++.........++.+.. .| ..++.++-. +.++..+.+++..++.
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVS-LDEDIKNLKKFLEENW 97 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 566788776 789999999988899987776644322334444443 33 344444443 3444555555555543
No 284
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=69.50 E-value=20 Score=27.84 Aligned_cols=69 Identities=25% Similarity=0.202 Sum_probs=43.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++.+|+..+|..|.+++......|.+++++... ..+.+ ..+.++.++..+..+ .+.++..+..++..++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 567888888999999999999999986666433 33332 233456666655432 1334445555555444
No 285
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=69.41 E-value=27 Score=27.39 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=44.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEK-RIILQAYGAQLILTNAE-MGIDEEFRIVEELLN 140 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~-~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~ 140 (221)
++.+|+..+|..|.+++......|.+++++......... .+.++..|.++..+..+ .+.++..+...+..+
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 566888889999999999988889987777654433333 34455567776655433 123333344444433
No 286
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=69.40 E-value=20 Score=28.52 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=43.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
|+..+||.+++--|+++|..-...|.++++.-. +......+.++..|.++..+..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR-RAPDETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCCHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeC-CcHHHHHHHHHHhCCcEEEEEc
Confidence 477789999999999999999999998766543 3456677888899988876543
No 287
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=69.12 E-value=22 Score=27.74 Aligned_cols=54 Identities=20% Similarity=0.012 Sum_probs=36.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~ 123 (221)
++.+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 69 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEE
Confidence 567888888999999999988899987776543211 122334555676665544
No 288
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=68.96 E-value=30 Score=26.35 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=45.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~ 142 (221)
++.+|+.++|-.|.+++......|.++++....+.. ....+.++..|.++..+..+- +.++..+..++..++.
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 456888888999999999999999988775433211 112234556687777664431 2333444444444443
No 289
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=68.77 E-value=30 Score=25.00 Aligned_cols=84 Identities=10% Similarity=0.095 Sum_probs=40.6
Q ss_pred EEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHH-HHHHHHHHhhCCCeeecCCCCCCcc-HHHHHhhHHHHHHHhhCCC
Q 043209 98 LVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE-FRIVEELLNKIPTSFNPHQFKNPAN-PKTHYETTGPEIWEGTRGQ 175 (221)
Q Consensus 98 ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~n~~~-~~~g~~t~~~Ei~~q~~~~ 175 (221)
+++.........+.+...|++|+....+..-... .+..+ ..++.+..+..-+.+-..- .+ ....+..++.+++ +.
T Consensus 22 l~~s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~-~~~~~G~~~~~i~~Dv~~~~~~-~v~~~~~~i~~~~-G~ 98 (157)
T 3gxh_A 22 LLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGK-LVTQAGMDYVYIPVDWQNPKVE-DVEAFFAAMDQHK-GK 98 (157)
T ss_dssp EEEEBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHH-HHHHTTCEEEECCCCTTSCCHH-HHHHHHHHHHHTT-TS
T ss_pred eeEcCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHH-HHHHcCCeEEEecCCCCCCCHH-HHHHHHHHHHhcC-CC
Confidence 3444445566677777888888776432111100 01122 2223323232223322111 12 3445555666666 45
Q ss_pred CCEEEEccCc
Q 043209 176 VDIFVSGIGT 185 (221)
Q Consensus 176 ~d~vv~p~G~ 185 (221)
|.+|-+.|+
T Consensus 99 -dVLVnnAgg 107 (157)
T 3gxh_A 99 -DVLVHCLAN 107 (157)
T ss_dssp -CEEEECSBS
T ss_pred -CEEEECCCC
Confidence 888888875
No 290
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=68.45 E-value=33 Score=29.97 Aligned_cols=60 Identities=28% Similarity=0.312 Sum_probs=41.7
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC---C-HHHHHHHHHcCCEEEEeCCC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYK-LILVMPAFM---S-LEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~-~~ivvp~~~---~-~~~~~~l~~~Ga~V~~v~~~ 125 (221)
+.++++.+|+.++|..|.+++......|.+ ++++..... . ....+.++..|++|..+..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 287 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeC
Confidence 445677899999999999999988888986 444433221 1 23445678889988776543
No 291
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=68.09 E-value=47 Score=26.97 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=31.2
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEP 210 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~ 210 (221)
.+++++ .++||+||| .+..++.|+..++++.+ .++.|+|.+.
T Consensus 242 ~~ll~~-~~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvigfD~ 287 (355)
T 3e3m_A 242 ELILQE-YPDTDCIFC--VSDMPAFGLLSRLKSIGVAVPEQVSVVGFGN 287 (355)
T ss_dssp HHHHHH-CTTCCEEEE--SSHHHHHHHHHHHHHHTCCTTTTCEEECSSC
T ss_pred HHHHcC-CCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 344444 357999997 46678889999999987 3788998764
No 292
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=67.92 E-value=45 Score=26.70 Aligned_cols=47 Identities=11% Similarity=0.081 Sum_probs=34.1
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC--CcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP--EIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~--~~kvigVe~~ 211 (221)
....+++++..+++|+||+ .+..++.|+..++++.+- ++.|+|++..
T Consensus 185 ~~~~~ll~~~~~~~~aI~~--~nd~~A~g~~~al~~~G~~~di~vvg~D~~ 233 (332)
T 2rjo_A 185 PIMQAWMTRFNSKIKGVWA--ANDDMALGAIEALRAEGLAGQIPVTGMDGT 233 (332)
T ss_dssp HHHHHHHHHHGGGEEEEEE--SSHHHHHHHHHHHHHTTCBTTBCEECSBCC
T ss_pred HHHHHHHHhcCCCeeEEEE--CCCchHHHHHHHHHHcCCCCCCEEEeecCC
Confidence 3455666651256899987 456788899999998774 7889988754
No 293
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=67.74 E-value=24 Score=27.54 Aligned_cols=70 Identities=10% Similarity=0.116 Sum_probs=43.7
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+.++|--|.++|......|.+++++-.. ..+++. .+.+|.++..+..+ .+.++..+...+..++
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 3677888899999999999999999987666532 333333 23446666554432 1344444555555444
No 294
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=67.37 E-value=34 Score=30.16 Aligned_cols=60 Identities=23% Similarity=0.250 Sum_probs=42.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHcCCEEEEeCCC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-----SLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-----~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
+.++++.+|+.++|..|.+++......|.+.++++..+. .....+.++..|++|..+..+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 320 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACD 320 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeC
Confidence 445677899999999999999988888986444443221 133456677889988776543
No 295
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=67.30 E-value=42 Score=26.10 Aligned_cols=71 Identities=17% Similarity=0.117 Sum_probs=42.8
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YG-AQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~G-a~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++.+|+..+ |.-|.+++......|.+++++.........++.+.. .| ..++.++-. +.++..+..++..++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT-QDEELDALFAGVKEA 83 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHHHHHH
Confidence 566888877 889999999988889987776544322334444443 34 344444443 334444444554444
No 296
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=66.83 E-value=24 Score=29.16 Aligned_cols=54 Identities=22% Similarity=0.107 Sum_probs=37.0
Q ss_pred CCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 043209 64 GLIT-PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLIL 121 (221)
Q Consensus 64 g~~~-~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~ 121 (221)
..+. +|.+.+|. ++|..|...+..|+.+|.+++++... ..+++.++ .+|++.+.
T Consensus 175 ~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 175 FGLKQPGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp TSTTSTTCEEEEE-CCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred cCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 3455 77775555 46999999999999999876555533 34555555 78886443
No 297
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=66.76 E-value=25 Score=29.26 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=41.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIIL----QAYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l----~~~Ga~V~~v~~ 124 (221)
+.|.+. |.+..+..-.+|.+.|+..++.++|++++++.|+.. +..-++.+ +..|+.+..+..
T Consensus 151 ~~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 218 (323)
T 3gd5_A 151 NFGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRD 218 (323)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HhCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 445443 345444445599999999999999999999999853 33333332 346777766543
No 298
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=66.74 E-value=43 Score=26.05 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=44.4
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc-C-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAY-G-AQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~-G-a~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+ |--|.+++......|.+++++.........++.+... | ..++.++-. +.++..+..++..++.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVA-EDASIDTMFAELGKVW 85 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCC-CHHHHHHHHHHHHHHc
Confidence 566888877 8899999999888999877766443334455555432 3 234444443 3444455555555554
No 299
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=66.73 E-value=24 Score=28.75 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=45.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC--EEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGA--QLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga--~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+++.+|+..+|--|.+++......|.++++....... ......++..|. ++..+..+ .+.++..+.+.+..++.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 3577888899999999999999999987766544211 222344555554 55544332 13344455555555554
No 300
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=66.67 E-value=22 Score=27.60 Aligned_cols=73 Identities=11% Similarity=0.030 Sum_probs=43.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+.++|..|.+++..... .|.+++++..... .....+.++..|.++..+..+ .+.++..+...++.++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 35678888889999999998888 8998777654321 122234455556555444322 1334444444555444
No 301
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=66.47 E-value=69 Score=28.28 Aligned_cols=123 Identities=11% Similarity=0.014 Sum_probs=71.7
Q ss_pred HHHHHHHcCCeEEE---------EecCCCCH--HHHHHHHHcCCEEEEeCCCC----ChhHHHHHHHHHHhhCCCeee-c
Q 043209 85 MACFAAAKGYKLIL---------VMPAFMSL--EKRIILQAYGAQLILTNAEM----GIDEEFRIVEELLNKIPTSFN-P 148 (221)
Q Consensus 85 lA~~a~~~g~~~~i---------vvp~~~~~--~~~~~l~~~Ga~V~~v~~~~----~~~~~~~~a~~~~~~~~~~~~-~ 148 (221)
+...|+..|.++++ ..|..+.. .........|++.+.++.+. ...++.+...+.+++-...++ -
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 55678889999764 33332212 24455566899999887652 223455544444333222111 0
Q ss_pred ------CC-CCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209 149 ------HQ-FKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES 213 (221)
Q Consensus 149 ------~~-~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s 213 (221)
.. ...+..........+.++.++++ ..+||+.+-+|.|+-= +.+..|...|+++.|...
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta~~----isr~RP~~pI~a~t~~~~ 428 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTPRL----VSKYRPNCPIILVTRCPR 428 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHHHH----HHHTCCSSCEEEEESCTT
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHHHH----HHhhCCCCCEEEEcCCHH
Confidence 00 01111222134455667778873 5699999999998544 455578999999998753
No 302
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=66.06 E-value=25 Score=27.98 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=42.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEe--CCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILT--NAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v--~~~~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|--|.++|......|.+++++-.. ..+.+ ..+.+|.++..+ |-. +.++..+..++..++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGAAACRVDVS-DEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCSSCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCcceEEEecCC-CHHHHHHHHHHHHHH
Confidence 667888888999999999998899987766532 23322 233446555444 433 344445555555444
No 303
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=65.88 E-value=46 Score=25.96 Aligned_cols=42 Identities=12% Similarity=0.191 Sum_probs=31.1
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
++++ .+++|+|||. +..++.|+..++++.+ .++.|+|++...
T Consensus 178 ~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vvg~d~~~ 223 (285)
T 3c3k_A 178 LLKS-AVKPDAIFAI--SDVLAAGAIQALTESGLSIPQDVAVVGFDGVD 223 (285)
T ss_dssp HHSS-SSCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSBCCG
T ss_pred HHcC-CCCCeEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEeCChH
Confidence 4443 3569999974 5677889999999876 368899987643
No 304
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=65.80 E-value=31 Score=29.10 Aligned_cols=60 Identities=25% Similarity=0.305 Sum_probs=39.8
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHH----HcCCEEEEeC
Q 043209 62 EKGLITPGKTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAF--MSLEKRIILQ----AYGAQLILTN 123 (221)
Q Consensus 62 ~~g~~~~g~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~l~----~~Ga~V~~v~ 123 (221)
+.|.+. |.+ |+..+- .|.+.|+..++.++|++++++.|+. .+...++.++ ..|+++..+.
T Consensus 170 ~~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 170 NFGKLQ-GLT-LTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HHSCCT-TCE-EEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-CeE-EEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 345443 344 444444 6999999999999999999999985 3333333333 6677666553
No 305
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=65.79 E-value=47 Score=26.06 Aligned_cols=72 Identities=10% Similarity=0.016 Sum_probs=45.6
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YG-AQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~G-a~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+ |.-|.+++......|.+++++.........++.++. .| ..++.++-. +.++..+..++..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 566888877 889999999988899987776654333445555543 34 344445543 3445555555555554
No 306
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=65.75 E-value=45 Score=25.83 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=44.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc---CCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAY---GAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~---Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
++..+|+.++|--|.++|......|.+++++...... ....+.++.. ...++.++-. .+.++..+...+..++.
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 3677888889999999999988899987666533211 1112233332 3455555541 13445555666665554
No 307
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=65.74 E-value=31 Score=27.30 Aligned_cols=54 Identities=20% Similarity=0.172 Sum_probs=35.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC-EEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL-EKRIILQAYGA-QLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~-~~~~~l~~~Ga-~V~~v~ 123 (221)
++.+|+..+|-.|.+++......|.+++++....... ...+.++..|. ++..+.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEe
Confidence 5668888889999999999888999877665432111 12233444554 555443
No 308
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=65.69 E-value=22 Score=28.00 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=44.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHH-cCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQA-YGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~-~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|--|.++|......|.+++++...... ....+.++. .|.++..+..+ .+.++..+.+++..++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 667888888999999999998999987665543211 112233333 67777655432 1334555555555444
No 309
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.68 E-value=26 Score=23.11 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=33.9
Q ss_pred EEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 73 LIECTSGNTGIGMACFAAAKG-YKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g-~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++..+.|..|.+++......| .+++++.. +..+.+.++..|.+++..+.
T Consensus 8 v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d~ 57 (118)
T 3ic5_A 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVDA 57 (118)
T ss_dssp EEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEecC
Confidence 444445999999999999899 66555443 45666666667777766554
No 310
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=65.63 E-value=29 Score=29.06 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=36.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRII----LQAYGAQLILTN 123 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~----l~~~Ga~V~~v~ 123 (221)
|.+..+..-.+|.+.|+..++.++|++++++.|+.. +..-++. .+..|+.+..+.
T Consensus 175 glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 175 DCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp GCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 344344444589999999999999999999999852 3333332 244566665543
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=65.56 E-value=33 Score=32.08 Aligned_cols=59 Identities=24% Similarity=0.351 Sum_probs=43.0
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCCC
Q 043209 67 TPGKTVLIECTSGNTGIGMACFAA-AKGYKLILVMPAF---M--SLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 67 ~~g~~~vv~assGN~~~alA~~a~-~~g~~~~ivvp~~---~--~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
.++++.+|+.++|-.|.++|..-. ..|.+.++++..+ . ....++.++..|+++..+..+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D 592 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD 592 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence 456677888888999999998876 7899866666443 1 234567788899999876543
No 312
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=65.46 E-value=18 Score=28.40 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=38.7
Q ss_pred CCeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcC-CEE--EEeCCCCChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSG--NTGIGMACFAAAKGYKLILVMPAFMSLEK-RIILQAYG-AQL--ILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assG--N~~~alA~~a~~~g~~~~ivvp~~~~~~~-~~~l~~~G-a~V--~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
|++.||+..+| --|.++|......|.++++.-........ .+.++..+ .++ +.+|-. +.++..+..++..++.
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQ-SDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCC-CHHHHHHHHHHHHHHh
Confidence 46767777555 47778888878888887666543322222 23333333 233 333432 2344444444444443
No 313
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=65.36 E-value=28 Score=28.89 Aligned_cols=53 Identities=28% Similarity=0.326 Sum_probs=36.2
Q ss_pred CCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 043209 65 LIT-PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLIL 121 (221)
Q Consensus 65 ~~~-~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~ 121 (221)
.+. +|++.+|. ++|..|.+++..|+.+|.+++++... ..+++.++ .+|++.+.
T Consensus 183 ~~~~~g~~VlV~-GaG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 183 GLDEPGKHIGIV-GLGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp TCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred CcCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 355 77775555 46999999999999999976555433 34444444 78886543
No 314
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=65.28 E-value=24 Score=27.78 Aligned_cols=70 Identities=19% Similarity=0.157 Sum_probs=42.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|.-|.+++......|.+++++........ +..+.++.++..+..+ .+.++..+...+..++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD--DLVAAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH--HHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 56788888899999999998889998777764432222 2233455555544332 1233444444444443
No 315
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=65.02 E-value=27 Score=27.69 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=43.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|--|.++|......|.+++++-.. ..+.+ ..+.+|.++..+..+ .+.++..+..++..++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567888899999999999999999987766533 33322 234457666655432 1344445555555444
No 316
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=64.46 E-value=24 Score=28.08 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=44.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++..+|+.+++--|.++|......|.+++++-. +..+++. .+.+|.++..+..+ .+.++..+..++..++
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDK---SAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC---CHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 367788889999999999999999998776643 2333333 34566666655432 1344555555555444
No 317
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=64.28 E-value=38 Score=26.33 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=27.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+++.+|+.++|.-|.+++......|.+++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 356788999999999999999889998776653
No 318
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=64.17 E-value=31 Score=27.34 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=41.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEe--CCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILT--NAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v--~~~~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|--|.++|......|.+++++-.. ..+++ ..+.++.++..+ |-. +.++..+..++..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVT-DPDSVRALFTATVEK 99 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHH
Confidence 566888888999999999998899987665432 33332 233445555444 433 344455555555444
No 319
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=64.04 E-value=29 Score=28.08 Aligned_cols=51 Identities=10% Similarity=-0.006 Sum_probs=33.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
.++..++|..+..++..+- +.-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 4666666666666665554 32234566666555666666889999999988
No 320
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=63.98 E-value=33 Score=27.50 Aligned_cols=148 Identities=13% Similarity=0.067 Sum_probs=75.3
Q ss_pred HHHHHHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--C---C-----CHH-----HHHHHHHc--CC
Q 043209 56 MIKDAEEKGLITPGKTVLIECTSGNTG-IGMACFAAAKGYKLILVMPA--F---M-----SLE-----KRIILQAY--GA 117 (221)
Q Consensus 56 ~~~~a~~~g~~~~g~~~vv~assGN~~-~alA~~a~~~g~~~~ivvp~--~---~-----~~~-----~~~~l~~~--Ga 117 (221)
.+..+.+++. ..|+..+..... ......+...|++++.+-.. . . ... -.+.+... |.
T Consensus 54 ~i~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~~G~ 128 (325)
T 2x7x_A 54 DVHYFMDEGV-----DLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILSDKYTAYIGADNYEIGRSVGNYIASSLKGK 128 (325)
T ss_dssp HHHHHHHTTC-----SEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCCSSSCSSEEEEECHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHcCC-----CEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCCCCCcceeEEEecCHHHHHHHHHHHHHHHcCCC
Confidence 4455555553 336665543322 23333455679998776421 1 1 011 12333332 54
Q ss_pred -EEEEeCCCCCh---hHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHH
Q 043209 118 -QLILTNAEMGI---DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193 (221)
Q Consensus 118 -~V~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~ 193 (221)
+|.++.+..+. .++.+-.++..++.++.-+.......+..+.++ ....+++++- +++|+|||. +...+.|+.
T Consensus 129 ~~I~~i~~~~~~~~~~~R~~Gf~~al~~~pg~~~~~~~~~~~~~~~~~-~~~~~ll~~~-~~~~aI~~~--nd~~A~g~~ 204 (325)
T 2x7x_A 129 GNIVELTGLSGSTPAMERHQGFMAAISKFPDIKLIDKADAAWERGPAE-IEMDSMLRRH-PKIDAVYAH--NDRIAPGAY 204 (325)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTEEEEEEEEECTTSHHHHH-HHHHHHHHHC-SCCCEEEES--STTHHHHHH
T ss_pred ceEEEEECCCCCccHHHHHHHHHHHHHhCCCCEEEeeecCCCCHHHHH-HHHHHHHHhC-CCCCEEEEC--CCchHHHHH
Confidence 45455433222 233333344455543432211111122333243 3455666553 579999975 456788999
Q ss_pred HHHHhcC--CCcEEEEEeCCC
Q 043209 194 NFLKKKN--PEIKVYGVEPAE 212 (221)
Q Consensus 194 ~~~~~~~--~~~kvigVe~~~ 212 (221)
.++++.+ .++.|+|++...
T Consensus 205 ~al~~~Gip~dv~vig~D~~~ 225 (325)
T 2x7x_A 205 QAAKMAGREKEMIFVGIDALP 225 (325)
T ss_dssp HHHHHTTCTTSSEEEEEECCC
T ss_pred HHHHHcCCCCCeEEEEECCCc
Confidence 9998876 378999998654
No 321
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=63.97 E-value=47 Score=25.79 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=23.6
Q ss_pred CeEEEeeCCC-hHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSG-NTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assG-N~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++| .-|.+++......|.+++++..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 5556666666 5999999988888988666543
No 322
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=63.92 E-value=31 Score=29.05 Aligned_cols=35 Identities=9% Similarity=0.111 Sum_probs=28.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF 103 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~ 103 (221)
|.+..+..-.+|.+.|+..++.++|++++++.|+.
T Consensus 153 glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~ 187 (355)
T 4a8p_A 153 DCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEG 187 (355)
T ss_dssp GCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCc
Confidence 34434444459999999999999999999999985
No 323
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=63.65 E-value=49 Score=25.58 Aligned_cols=45 Identities=13% Similarity=0.225 Sum_probs=30.9
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
..+++++..+++|+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 167 ~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 215 (277)
T 3cs3_A 167 AKKILSQPQTEPVDVFAF--NDEMAIGVYKYVAETNYQMGKDIRIIGFDNS 215 (277)
T ss_dssp HHHHTTSCCCSSEEEEES--SHHHHHHHHHHHTTSSCCBTTTEEEECSSCC
T ss_pred HHHHHhcCCCCCcEEEEc--ChHHHHHHHHHHHHcCCCCCCcEEEEEeCCc
Confidence 344444312468999874 5677889999999876 35778887643
No 324
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=63.49 E-value=12 Score=31.56 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=34.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
++.+ |+.-+.|..|.+++..++.+|.+++++-+ +..+.+.++.+|++++
T Consensus 171 ~g~~-V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~---~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPAR-VLVFGVGVAGLQAIATAKRLGAVVMATDV---RAATKEQVESLGGKFI 219 (384)
T ss_dssp CCCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---CSTTHHHHHHTTCEEC
T ss_pred CCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCeEE
Confidence 3444 77777899999999999999997333322 2334555667999865
No 325
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=63.07 E-value=12 Score=29.44 Aligned_cols=32 Identities=31% Similarity=0.477 Sum_probs=27.5
Q ss_pred CCeEEEeeC----------------CChHHHHHHHHHHHcCCeEEEEe
Q 043209 69 GKTVLIECT----------------SGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 69 g~~~vv~as----------------sGN~~~alA~~a~~~g~~~~ivv 100 (221)
|++.+|+++ ||-.|.++|.++...|.+++++.
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 366688887 69999999999999999988875
No 326
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=62.86 E-value=18 Score=29.05 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=37.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CHHHHH---HHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-M--SLEKRI---ILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~--~~~~~~---~l~~~Ga~V~~v~~ 124 (221)
++.+|+..+|..|.+++......|.+++++.... . ...+.+ .+...|.+++..+-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 3457888889999999999888899888877543 1 122322 23456777766553
No 327
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=62.37 E-value=52 Score=25.38 Aligned_cols=65 Identities=17% Similarity=0.183 Sum_probs=43.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+|..|.+++......|.+++++...... +..|...+.++-. +.++..+..++..++.
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQYPFATEVMDVA-DAAQVAQVCQRLLAET 72 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SCCSSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hcCCceEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 567889999999999999999999988777644221 2245555665544 3444455555555543
No 328
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=62.05 E-value=33 Score=26.30 Aligned_cols=51 Identities=25% Similarity=0.309 Sum_probs=35.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
++.+|+..+|..|.+++......|.+++++.... .... +.+|+..+.++-.
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--~~~~---~~~~~~~~~~D~~ 53 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP--EEAA---QSLGAVPLPTDLE 53 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHH---HHHTCEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHH---HhhCcEEEecCCc
Confidence 5668999999999999999998999877665432 2222 2236666666543
No 329
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=61.95 E-value=54 Score=25.46 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|..|.+++......|.+++++.
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 5678899999999999999988999877664
No 330
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=61.90 E-value=28 Score=27.58 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=41.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
+..+|+..+|..|.+++......|.+++++...... ....+.++..| ++..+..+ .+.++..+..++..++.
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 567888899999999999999899886665432111 11122333345 56555433 12334444445554443
No 331
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=61.78 E-value=56 Score=25.61 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=41.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc-CCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AY-GAQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~-Ga~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++..+|+..+|..|.+++......|.+++++.. +..+.+.+. .. ++..+.++-. +.++..+..++..++
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---DESGGRALEQELPGAVFILCDVT-QEDDVKTLVSETIRR 79 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCTTEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhcCCeEEEcCCC-CHHHHHHHHHHHHHH
Confidence 366788889999999999999999998766543 233333332 22 3344444443 334444444444443
No 332
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.67 E-value=30 Score=28.36 Aligned_cols=52 Identities=25% Similarity=0.368 Sum_probs=36.8
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
...+ +|.+.+|... |..|.+++..|+.+|. +++++.+ +..+++.++.+ ++.+
T Consensus 160 ~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~~v 212 (343)
T 2dq4_A 160 GSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-ADRL 212 (343)
T ss_dssp TTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CSEE
T ss_pred hCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HHhc
Confidence 5556 8877566655 9999999999999998 6655542 45666666666 6544
No 333
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=61.34 E-value=53 Score=25.21 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=32.9
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
...+++++- +++|+||+. +..++.|+..++++.+ .++.|+|.+..
T Consensus 171 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 219 (275)
T 3d8u_A 171 GLAKLLLRD-SSLNALVCS--HEEIAIGALFECHRRVLKVPTDIAIICLEGS 219 (275)
T ss_dssp HHHHHHTTC-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEESSCC
T ss_pred HHHHHHhCC-CCCCEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEecCCc
Confidence 445555543 569999974 5677889999999876 36789998754
No 334
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=61.27 E-value=29 Score=27.35 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=43.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|--|.++|......|.+++++.. +..+++.+.......+.++-. +.++..+...+..++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLAR---RVERLKALNLPNTLCAQVDVT-DKYTFDTAITRAEKI 84 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEES---CHHHHHTTCCTTEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHhhcCCceEEEecCC-CHHHHHHHHHHHHHH
Confidence 56788899999999999999889998777653 244444333223444445443 344455555555444
No 335
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=61.26 E-value=31 Score=26.93 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=26.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|.-|.+++......|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788999999999999998889998776643
No 336
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=61.23 E-value=65 Score=26.19 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=32.8
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
..+++++ .++||+|||. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 259 ~~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~~ 306 (366)
T 3h5t_A 259 AKELLET-HPDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDGT 306 (366)
T ss_dssp HHHHHHH-CTTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred HHHHHcC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECCC
Confidence 3444444 3579999984 5678889999999987 37999999753
No 337
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=61.12 E-value=34 Score=30.23 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=33.3
Q ss_pred CeEEEeeCCChHHH---HHHHHHHHcCCeEEEEecCC-CCH---HHHHHHHHcCCEEE
Q 043209 70 KTVLIECTSGNTGI---GMACFAAAKGYKLILVMPAF-MSL---EKRIILQAYGAQLI 120 (221)
Q Consensus 70 ~~~vv~assGN~~~---alA~~a~~~g~~~~ivvp~~-~~~---~~~~~l~~~Ga~V~ 120 (221)
.+.+|.++.||.|- .+|...+..|+++.++++.. .+. .+.+.++.+|..+.
T Consensus 53 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 53 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 45677888888873 33333444589999998654 232 34566778887664
No 338
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=61.06 E-value=40 Score=28.18 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=65.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++++-+. .+.......|++. ++ +.+ ++.++. +...+.-.
T Consensus 162 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~-------ell~~a-DiV~l~~P 224 (352)
T 3gg9_A 162 TLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKD-------ALFEQS-DVLSVHLR 224 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHH-------HHHHHC-SEEEECCC
T ss_pred EEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHH-------HHHhhC-CEEEEecc
Confidence 4788889999999999999999988777543 2334455677752 21 122 333444 45544332
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV--SGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~--~Gi~~~~~~ 198 (221)
.++.+. ..+..+.+.++ +++.+++-+|.|+.. ..+..+++.
T Consensus 225 lt~~t~----~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 225 LNDETR----SIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNR 267 (352)
T ss_dssp CSTTTT----TCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHH
T ss_pred CcHHHH----HhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHh
Confidence 232221 22345677777 578999999988853 455666665
No 339
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=60.82 E-value=58 Score=25.46 Aligned_cols=49 Identities=12% Similarity=0.038 Sum_probs=36.2
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC---CcEEEEEeCCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP---EIKVYGVEPAE 212 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~---~~kvigVe~~~ 212 (221)
....+++++- +++|++++-+.+-..+.|+..++++.+- ++.|+|++-..
T Consensus 184 ~~~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~~ 235 (306)
T 8abp_A 184 DAANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVD 235 (306)
T ss_dssp HHHHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGG
T ss_pred HHHHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcHH
Confidence 4556666654 6789855556677788899999999874 78899987554
No 340
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=60.74 E-value=53 Score=25.22 Aligned_cols=73 Identities=12% Similarity=0.222 Sum_probs=44.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL-EKRIIL-QAYGAQLILTNAE-MGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~-~~~~~l-~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+|..|.+++......|.+++++....... ..++.+ +..+.++..+..+ .+.++..+..++..++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 5668888899999999999888998877776533222 223333 2346666554432 13344444455555444
No 341
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=60.68 E-value=67 Score=26.12 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=65.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++++-+.. .. ...+.+|++. + + .+ ++.++. +...+.-.
T Consensus 144 ~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~--~--l~-------ell~~a-DvV~l~~p 205 (307)
T 1wwk_A 144 TIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V--D--LE-------TLLKES-DVVTIHVP 205 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C--C--HH-------HHHHHC-SEEEECCC
T ss_pred eEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c--C--HH-------HHHhhC-CEEEEecC
Confidence 47777899999999999999999877665543 22 2345677653 1 1 22 233343 45544332
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV--SGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~--~Gi~~~~~~ 198 (221)
.++... ..+..+.++++ +++.+++-+|.|+.. ..+..+++.
T Consensus 206 ~~~~t~----~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 206 LVESTY----HLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKE 248 (307)
T ss_dssp CSTTTT----TCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CChHHh----hhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHh
Confidence 222211 12335677777 468999999999864 477777765
No 342
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=60.62 E-value=32 Score=27.10 Aligned_cols=66 Identities=14% Similarity=0.210 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHH
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTNAEM-GIDEEFRIVEEL 138 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~ 138 (221)
++.+|+.++|--|.++|......|.+++++.. +..+.+ ..+.++.++..+..+- +.++..+.+++.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADL---AAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 56788888899999999998889998666543 233333 2344566665554331 334444444444
No 343
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=60.62 E-value=18 Score=30.89 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=35.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~ 121 (221)
+.+ |+..+.|+.|.+++..++.+|.+++++- .+..+++.++.+|++.+.
T Consensus 172 g~~-V~ViGaG~iG~~aa~~a~~~Ga~V~v~D---~~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 172 PAK-VMVIGAGVAGLAAIGAANSLGAIVRAFD---TRPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CCE-EEEECCSHHHHHHHHHHHHTTCEEEEEC---SCGGGHHHHHHTTCEECC
T ss_pred CCE-EEEECCCHHHHHHHHHHHHCCCEEEEEc---CCHHHHHHHHHcCCEEEE
Confidence 344 7777789999999999999998644432 234455566778998653
No 344
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=60.38 E-value=41 Score=28.85 Aligned_cols=74 Identities=20% Similarity=0.072 Sum_probs=47.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCC-------------HHHHHHHHHcCCEEEEeCCCCC-hhHHHH
Q 043209 69 GKTVLIECTSGNTGIGMACFAA-AKGYKLILVMPAFMS-------------LEKRIILQAYGAQLILTNAEMG-IDEEFR 133 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~-~~g~~~~ivvp~~~~-------------~~~~~~l~~~Ga~V~~v~~~~~-~~~~~~ 133 (221)
+++.+|+.+|+..|+|.|.+.+ ..|-.++++.-+... ....+.++..|.+.+.+..+-. -+...+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 3677888888889988887765 678887776633211 1234677888988887765432 233444
Q ss_pred HHHHHHhhC
Q 043209 134 IVEELLNKI 142 (221)
Q Consensus 134 ~a~~~~~~~ 142 (221)
...++.++.
T Consensus 130 vi~~i~~~~ 138 (401)
T 4ggo_A 130 VIEEAKKKG 138 (401)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 555555554
No 345
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=60.29 E-value=41 Score=26.30 Aligned_cols=74 Identities=18% Similarity=0.198 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh-CCCeeec-CCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEcc
Q 043209 106 LEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK-IPTSFNP-HQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~-~~~~~~~-~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~ 183 (221)
....+.+...|++|+.++.+ .+...+.+.++.+. .....++ ....++. ....+..++.+++ +.+|.+|..+
T Consensus 34 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~----~v~~~~~~~~~~~-g~id~lv~nA 106 (266)
T 4egf_A 34 ADIARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTVAIDLAEPD----APAELARRAAEAF-GGLDVLVNNA 106 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEECCTTSTT----HHHHHHHHHHHHH-TSCSEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEEEecCCCHH----HHHHHHHHHHHHc-CCCCEEEECC
Confidence 34567778899999999875 33444444455442 2222222 2222332 3345667788887 6799999999
Q ss_pred Cch
Q 043209 184 GTG 186 (221)
Q Consensus 184 G~G 186 (221)
|..
T Consensus 107 g~~ 109 (266)
T 4egf_A 107 GIS 109 (266)
T ss_dssp CCC
T ss_pred CcC
Confidence 854
No 346
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=60.27 E-value=57 Score=25.21 Aligned_cols=33 Identities=24% Similarity=0.167 Sum_probs=27.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+..+|.-|.+++......|.+++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567889999999999999998899987766543
No 347
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=59.96 E-value=37 Score=27.52 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=45.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA-EMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++. +.++ -..+..++..++....+++...
T Consensus 85 v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p 162 (365)
T 3get_A 85 IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLP 162 (365)
T ss_dssp EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESS
T ss_pred EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCC
Confidence 777777777666655543 222234555554444556677889999999985 3233 3333333333333356666433
Q ss_pred CCCc
Q 043209 152 KNPA 155 (221)
Q Consensus 152 ~n~~ 155 (221)
.||.
T Consensus 163 ~npt 166 (365)
T 3get_A 163 NNPL 166 (365)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 4443
No 348
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=59.83 E-value=60 Score=25.30 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=31.0
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC--CcEEEEEe
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP--EIKVYGVE 209 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~--~~kvigVe 209 (221)
....+++ +- +++|+ ||. +...+.|+..++++.+- ++.|+|..
T Consensus 184 ~~~~~~l-~~-~~~~a-i~~--~d~~a~g~~~al~~~g~~~di~vvg~d 227 (304)
T 3o1i_D 184 NLVQRVI-DM-GNIDY-IVG--SAVAIEAAISELRSADKTHDIGLVSVY 227 (304)
T ss_dssp HHHHHHH-HH-SCCSE-EEE--CHHHHHHHHHHHTTTTCGGGSEEBCSS
T ss_pred HHHHHHH-cC-CCCCE-EEe--cCcchHHHHHHHHhcCCCCCeEEEEeC
Confidence 3445566 44 57999 654 66889999999999875 78888863
No 349
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=59.63 E-value=69 Score=27.87 Aligned_cols=50 Identities=12% Similarity=-0.094 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 51 RIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 51 R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++..+.+..+.+.........+|+..+.||-|..+|.....+|.+++.+.
T Consensus 216 ~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 216 YGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 46677777665532222223458889999999999999999999987654
No 350
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=59.57 E-value=46 Score=25.88 Aligned_cols=43 Identities=12% Similarity=0.239 Sum_probs=32.8
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEe
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVE 209 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe 209 (221)
...+++++- +++|+|||. +..++.|+..++++.+ .++.|+|.+
T Consensus 178 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 178 AAKKLMKLK-NTPKALFCN--SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp HHHHHTTSS-SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred HHHHHHcCC-CCCcEEEEc--CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 445555542 579999974 6778889999999987 378899998
No 351
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=59.13 E-value=55 Score=25.86 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=37.7
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTNAE 125 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~~~ 125 (221)
+++.+|+.++|--|.+++......|.+++++... ..+.+ ..+.++.++..+..+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D 70 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVRELD 70 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEEEcC
Confidence 3677899999999999999999999887666533 33333 334457777766543
No 352
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=59.02 E-value=31 Score=28.00 Aligned_cols=54 Identities=9% Similarity=-0.058 Sum_probs=33.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcC------------CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKG------------YKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g------------~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
.++..++|..+..++..+.... -.-.|+++...-......++.+|++++.++.+
T Consensus 88 ~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 88 YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 3667777777666555443211 12355555544555667778889999998754
No 353
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=59.01 E-value=68 Score=25.66 Aligned_cols=36 Identities=8% Similarity=0.070 Sum_probs=28.7
Q ss_pred CCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 175 QVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 175 ~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
+||+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 239 ~~~ai~~~--~d~~A~g~~~al~~~G~~vP~disvig~D~~~ 278 (332)
T 2o20_A 239 GATSAVVS--HDTVAVGLLSAMMDKGVKVPEDFEIISGANSP 278 (332)
T ss_dssp TCCEEEES--CHHHHHHHHHHHHHTTCCTTTTCEEEESSCCG
T ss_pred CCCEEEEC--ChHHHHHHHHHHHHcCCCCccCEEEEEeCChH
Confidence 68999984 6678889999999887 368899987543
No 354
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=58.85 E-value=54 Score=25.36 Aligned_cols=70 Identities=21% Similarity=0.176 Sum_probs=42.1
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+..+|-.|.+++......|.+++++... ..+.+. .+.+|.++..+..+ .+.++..+..++..++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 3667888899999999999999999987766533 333332 23345555544322 1233444444444443
No 355
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=58.83 E-value=22 Score=30.37 Aligned_cols=36 Identities=28% Similarity=0.403 Sum_probs=30.0
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
+.|+++ |...++|..|+.++.+|+.+|++++++-|.
T Consensus 32 ~~~~~~-IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPGAW-LGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 456655 777889999999999999999998887654
No 356
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=58.83 E-value=53 Score=25.88 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=36.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHH---HHHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM---SLEKRI---ILQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~---~~~~~~---~l~~~Ga~V~~v~ 123 (221)
++.+|+..+|+.|.+++......|.+++++..... ...+.+ .+...|.+++..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D 64 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEec
Confidence 35588888899999999998888988888775432 133333 2334566666554
No 357
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=58.80 E-value=41 Score=26.53 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=38.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKG-YKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g-~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
++.+|+..+|..|.+++......| .+++++...... .....+...|.+++..+-
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~-~~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRK-KAAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTS-HHHHHHHHTTCEEEECCT
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCC-HHHHHHHHCCCEEEEecC
Confidence 466888889999999999887778 888888755332 223445567888777654
No 358
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=58.56 E-value=26 Score=28.62 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=40.5
Q ss_pred EEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh-CCCeeecCC
Q 043209 73 LIECTSGNTGIGMACFAAA-KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK-IPTSFNPHQ 150 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~-~~~~~~~~~ 150 (221)
|+..+++..+..++..+-. -|- .|+++...-......++..|++++.++.+.++.-..+..++..++ ....+++..
T Consensus 95 v~~~~G~~~al~~~~~~l~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (369)
T 3cq5_A 95 LWAANGSNEILQQLLQAFGGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTT 172 (369)
T ss_dssp EEEESHHHHHHHHHHHHHCSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred EEECCChHHHHHHHHHHhcCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 6666666666655544431 232 334433223344556788999999887542221111222222222 446677655
Q ss_pred CCCC
Q 043209 151 FKNP 154 (221)
Q Consensus 151 ~~n~ 154 (221)
..||
T Consensus 173 ~~np 176 (369)
T 3cq5_A 173 PNNP 176 (369)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 4554
No 359
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=58.46 E-value=29 Score=27.97 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=43.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHh--hCCCeeecCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLN--KIPTSFNPHQ 150 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~--~~~~~~~~~~ 150 (221)
++..++|..+..++..+- .+-.-.|+++...-......++..|++++.++.+.++.-..+..++..+ .....+++..
T Consensus 71 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~ 149 (354)
T 3ly1_A 71 ILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVN 149 (354)
T ss_dssp EEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEES
T ss_pred EEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeC
Confidence 677777777666665543 2222234454443445567778899999998754222111222223333 3345666644
Q ss_pred CCCCc
Q 043209 151 FKNPA 155 (221)
Q Consensus 151 ~~n~~ 155 (221)
..||.
T Consensus 150 p~npt 154 (354)
T 3ly1_A 150 PNNPT 154 (354)
T ss_dssp SCTTT
T ss_pred CCCCc
Confidence 44543
No 360
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=58.38 E-value=15 Score=30.30 Aligned_cols=60 Identities=10% Similarity=0.033 Sum_probs=40.3
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHc-CCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCC
Q 043209 62 EKGLITPGKTVLIECTS--GNTGIGMACFAAAK-GYKLILVMPAFM-SLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 62 ~~g~~~~g~~~vv~ass--GN~~~alA~~a~~~-g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+.|.+. |.+..+..-. +|.++|++.++.++ |++++++.|+.. +...+ ++..|+++..+..
T Consensus 143 ~~g~l~-gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~d 206 (299)
T 1pg5_A 143 HFNTID-GLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVEN 206 (299)
T ss_dssp HHSCST-TCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEESC
T ss_pred HhCCcC-CcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeCC
Confidence 345443 3443333333 79999999999999 999999999853 33333 4577887766543
No 361
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=58.31 E-value=33 Score=27.27 Aligned_cols=71 Identities=11% Similarity=0.125 Sum_probs=41.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGA---QLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
+..+|+.++|--|.++|......|.+++++-..... ....+.+...+. ..+.+|-. +.++..+..++..++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVG-DPDQVAALFAAVRAE 108 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 567888888999999999988899987666533211 122233333332 33444443 344555555555444
No 362
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=58.25 E-value=62 Score=25.02 Aligned_cols=68 Identities=7% Similarity=0.072 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHc--CCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL-QAY--GAQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l-~~~--Ga~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++.+|+..+|.-|.+++......|.+++++... ..+.+.+ +.+ ...++.++-. +.++..+..++..++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLD---VMAAQAVVAGLENGGFAVEVDVT-KRASVDAAMQKAIDA 83 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHhcCCeEEEEeCC-CHHHHHHHHHHHHHH
Confidence 567899999999999999999999987766432 3333332 223 3445555543 233444444444433
No 363
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=58.17 E-value=28 Score=27.63 Aligned_cols=54 Identities=20% Similarity=0.277 Sum_probs=35.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHH---HHHcCCEEEEeC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRII---LQAYGAQLILTN 123 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~---l~~~Ga~V~~v~ 123 (221)
++.+|+..+|..|.+++......|.+++++...... ..+.+. +...|.+++..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCC
Confidence 345788888999999999988889888887754321 333332 233465555443
No 364
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=57.92 E-value=70 Score=25.46 Aligned_cols=45 Identities=9% Similarity=0.197 Sum_probs=34.1
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEP 210 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~ 210 (221)
....+++++- +++|+||++ +..++.|+..++++.+ .++.|+|.+.
T Consensus 178 ~~~~~ll~~~-~~~~aI~~~--nD~~A~g~~~al~~~G~~dv~VvG~D~ 223 (316)
T 1tjy_A 178 QTAEGIIKAY-PDLDAIIAP--DANALPAAAQAAENLKRNNLAIVGFST 223 (316)
T ss_dssp HHHHHHHHHC-SSCCEEEEC--STTHHHHHHHHHHHTTCCSCEEEEBCC
T ss_pred HHHHHHHHhC-CCCCEEEEC--CCccHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4556666664 579999986 4567889999999887 5688999865
No 365
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=57.82 E-value=47 Score=25.71 Aligned_cols=86 Identities=15% Similarity=0.205 Sum_probs=48.4
Q ss_pred eEEEEecCC--CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCC-Ce-eecCCCCCCccHHHHHhhHHHHHHH
Q 043209 95 KLILVMPAF--MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIP-TS-FNPHQFKNPANPKTHYETTGPEIWE 170 (221)
Q Consensus 95 ~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~-~~-~~~~~~~n~~~~~~g~~t~~~Ei~~ 170 (221)
+.++|.-.. .-....+.+...|++|+.++.+ .+...+.+.++.+... .. ++....++ ...+ ....+..++.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~-~~~~~~~~~~~ 88 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRN--EEKLRQVASHINEETGRQPQWFILDLLT-CTSE-NCQQLAQRIAV 88 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSCCCEEEECCTTT-CCHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCCceEEEEeccc-CCHH-HHHHHHHHHHH
Confidence 444554332 1234566777899999998875 3333444444443321 12 22222210 2232 44566677777
Q ss_pred hhCCCCCEEEEccCc
Q 043209 171 GTRGQVDIFVSGIGT 185 (221)
Q Consensus 171 q~~~~~d~vv~p~G~ 185 (221)
.+ +.+|.+|..+|.
T Consensus 89 ~~-g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NY-PRLDGVLHNAGL 102 (252)
T ss_dssp HC-SCCSEEEECCCC
T ss_pred hC-CCCCEEEECCcc
Confidence 77 679999999985
No 366
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=57.70 E-value=70 Score=26.70 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=66.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++.+-+...+.... +..|++. ++ +. .++.++. +...+.--
T Consensus 166 tvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~~~g~~~--~~---~l-------~ell~~a-DvV~l~~P 229 (351)
T 3jtm_A 166 TIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE---KETGAKF--VE---DL-------NEMLPKC-DVIVINMP 229 (351)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH---HHHCCEE--CS---CH-------HHHGGGC-SEEEECSC
T ss_pred EEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH---HhCCCeE--cC---CH-------HHHHhcC-CEEEECCC
Confidence 48888999999999999999999966665544343333 3456532 21 12 2344544 45554333
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT--VSGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~--~~Gi~~~~~~ 198 (221)
.++.+. ..+..+.++++ +++.+++-++.|+. -..+..+++.
T Consensus 230 lt~~t~----~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 230 LTEKTR----GMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVES 272 (351)
T ss_dssp CCTTTT----TCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHHH----HhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHh
Confidence 233221 23456778888 57899999999886 4556666665
No 367
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=57.65 E-value=84 Score=28.23 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=47.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCCh-hHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI-DEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~-~~~~~~a~~~~~~ 141 (221)
++..+|+.+++-.|+++|......|.++++.-. .......+.++..|.+++.+..+ . .+..+.+++..++
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~-~~~~~~~~~i~~~g~~~~~~~~D--v~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF-KDATKTVDEIKAAGGEAWPDQHD--VAKDSEAIIKNVIDK 392 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS-SCCHHHHHHHHHTTCEEEEECCC--HHHHHHHHHHHHHHH
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC-ccHHHHHHHHHhcCCeEEEEEcC--hHHHHHHHHHHHHHh
Confidence 466788888888999999999999998666422 23445566777788888776654 5 4444444444444
No 368
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=57.43 E-value=56 Score=27.24 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=65.1
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+-|+.|.++|..++.+|++++.+-+...+.... .|++. ++ +.+ ++.++. +...+.-.
T Consensus 175 tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l~-------ell~~s-DvV~l~~P 236 (345)
T 4g2n_A 175 RLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TLD-------SLLGAS-DIFLIAAP 236 (345)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SHH-------HHHHTC-SEEEECSC
T ss_pred EEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CHH-------HHHhhC-CEEEEecC
Confidence 48888899999999999999999987776654333221 15432 21 122 344444 45554333
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV--SGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~--~Gi~~~~~~ 198 (221)
.++.+ ...+..+.++++ +++.+++-++.|+.. ..+..+++.
T Consensus 237 lt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 237 GRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp CCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 33322 233456778888 478999999998864 556666654
No 369
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=57.39 E-value=85 Score=26.32 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=32.6
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ 113 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~ 113 (221)
.|.+..+..-.-|.++|++.++.++|++++++.|+.. +..-++.++
T Consensus 187 ~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~ 234 (353)
T 3sds_A 187 EGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQ 234 (353)
T ss_dssp TTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 3445334444468899999999999999999999863 454444444
No 370
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=57.37 E-value=42 Score=26.06 Aligned_cols=84 Identities=26% Similarity=0.242 Sum_probs=49.3
Q ss_pred eEEEEecCC----CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCC--ee-ecCCCCCCccHHHHHhhHHHH
Q 043209 95 KLILVMPAF----MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPT--SF-NPHQFKNPANPKTHYETTGPE 167 (221)
Q Consensus 95 ~~~ivvp~~----~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~--~~-~~~~~~n~~~~~~g~~t~~~E 167 (221)
+.++|.-.. .-....+.+...|++|+.++.+ ....+.+.++.++.++ .. +.....++ + ....+..+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~-~v~~~~~~ 80 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG---ERLEKSVHELAGTLDRNDSIILPCDVTND---A-EIETCFAS 80 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHHHTSSSCCCEEEECCCSSS---H-HHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc---hHHHHHHHHHHHhcCCCCceEEeCCCCCH---H-HHHHHHHH
Confidence 344555433 2344567788899999998765 2233344444444322 22 22222232 2 34567778
Q ss_pred HHHhhCCCCCEEEEccCch
Q 043209 168 IWEGTRGQVDIFVSGIGTG 186 (221)
Q Consensus 168 i~~q~~~~~d~vv~p~G~G 186 (221)
+.+++ +.+|.+|..+|..
T Consensus 81 ~~~~~-g~id~li~~Ag~~ 98 (266)
T 3oig_A 81 IKEQV-GVIHGIAHCIAFA 98 (266)
T ss_dssp HHHHH-SCCCEEEECCCCC
T ss_pred HHHHh-CCeeEEEEccccc
Confidence 88887 5799999999864
No 371
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=57.32 E-value=77 Score=27.79 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=41.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-----CCHHHHHHHHHcCCEEEEeCCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-----MSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-----~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
++.+|+.++|-.|.++|..-...|.+.++++... ......+.++..|++|..+..+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 300 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACD 300 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEcc
Confidence 6778888899999999998888898655555332 1234566788899999876543
No 372
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=56.97 E-value=77 Score=25.68 Aligned_cols=118 Identities=18% Similarity=0.115 Sum_probs=68.0
Q ss_pred EEeeCCChHHHHHHHHHHHcC----CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeec
Q 043209 73 LIECTSGNTGIGMACFAAAKG----YKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNP 148 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g----~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 148 (221)
|..-+.|+.|.++|......| .+++++-+.. ...+.+.++.+|..+. .. .. +..++. +.+++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~-~~~~~~~l~~~G~~~~--~~---~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM-DLATVSALRKMGVKLT--PH---NK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT-TSHHHHHHHHHTCEEE--SC---HH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc-cHHHHHHHHHcCCEEe--CC---hH-------HHhccC-CEEEE
Confidence 667788999999999988888 5665553332 2135555667786642 21 11 222333 45555
Q ss_pred CCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209 149 HQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE 212 (221)
Q Consensus 149 ~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~ 212 (221)
.-- +. ....+..+|...+ .++.+|+.+.+|....-+...+.+..+..+++..-|..
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~ 146 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNT 146 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCc
Confidence 321 21 2233445565444 35677777766655555555565544566788777743
No 373
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=56.81 E-value=61 Score=27.25 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHc--CC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEE
Q 043209 52 IAFSMIKDAEEK--GL-ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLI 120 (221)
Q Consensus 52 ~a~~~~~~a~~~--g~-~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~ 120 (221)
+..+.+..+.++ |. --.|++ |+..+.||.|..+|.....+|.+++ +.. .+..+++. .+.+|++.+
T Consensus 153 GV~~~~~~~~~~~~G~~~L~Gkt-V~V~G~G~VG~~~A~~L~~~GakVv-v~D--~~~~~l~~~a~~~ga~~v 221 (364)
T 1leh_A 153 GVYRGMKAAAKEAFGSDSLEGLA-VSVQGLGNVAKALCKKLNTEGAKLV-VTD--VNKAAVSAAVAEEGADAV 221 (364)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EEC--SCHHHHHHHHHHHCCEEC
T ss_pred HHHHHHHHHHHhhccccCCCcCE-EEEECchHHHHHHHHHHHHCCCEEE-EEc--CCHHHHHHHHHHcCCEEE
Confidence 444444444332 42 224554 7888889999999999999999866 442 34555543 344576543
No 374
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=56.78 E-value=69 Score=25.04 Aligned_cols=45 Identities=13% Similarity=0.240 Sum_probs=32.5
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC--CcEEEEEeCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP--EIKVYGVEPA 211 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~--~~kvigVe~~ 211 (221)
...+++++- +++|+||+ .+...+.|+..++++.+. ++.|+|++..
T Consensus 177 ~~~~~l~~~-~~~~ai~~--~~d~~a~g~~~al~~~g~~~di~vig~d~~ 223 (305)
T 3g1w_A 177 VAHQLLEDY-PNLAGIFA--TEANGGVGVGDAVRLESRAGEIQIISFDTD 223 (305)
T ss_dssp HHHHHHHHC-TTEEEEEE--SSHHHHHHHHHHHHHTTCTTTSEEEEESCC
T ss_pred HHHHHHHhC-CCceEEEE--CCCcchhhHHHHHHhcCCCCCeEEEEeCCC
Confidence 344454443 56888886 455677899999999874 7999999764
No 375
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=56.71 E-value=68 Score=24.97 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=19.5
Q ss_pred HHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEE
Q 043209 55 SMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKG-YKLILV 99 (221)
Q Consensus 55 ~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g-~~~~iv 99 (221)
.+...+.++| .+.++++-.......++...+..+ -++..+
T Consensus 23 aiA~~la~~G-----a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~ 63 (256)
T 4fs3_A 23 GVAKVLDQLG-----AKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63 (256)
T ss_dssp HHHHHHHHTT-----CEEEEEESSGGGHHHHHHHHGGGTCSSCEEE
T ss_pred HHHHHHHHCC-----CEEEEEECCHHHHHHHHHHHHhcCCCcEEEE
Confidence 3344445566 454555554444455555555544 344443
No 376
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=56.71 E-value=51 Score=25.20 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=27.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+.++|..|.+++......|.+++++..
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 56788989999999999999999998776654
No 377
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=56.57 E-value=27 Score=26.87 Aligned_cols=34 Identities=32% Similarity=0.376 Sum_probs=27.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++++.+|+.++|--|.+++......|.+++++..
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 3467788888899999999999899988776653
No 378
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=56.56 E-value=89 Score=26.29 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=22.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
+|+..++|..++.++.+++.+|++++++-+.
T Consensus 21 ~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 21 KILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3666666777888888888888887776643
No 379
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=56.37 E-value=76 Score=25.42 Aligned_cols=131 Identities=8% Similarity=0.010 Sum_probs=70.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec-----------------CCCCH--HHHHHHHHcCC-EEEEeCCCCCh-h
Q 043209 71 TVLIECTSGNTGIGMACFAAAKGYKLILVMP-----------------AFMSL--EKRIILQAYGA-QLILTNAEMGI-D 129 (221)
Q Consensus 71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp-----------------~~~~~--~~~~~l~~~Ga-~V~~v~~~~~~-~ 129 (221)
..|+...++....+++-.+...+++++.+.. .+... .-.+.+...|. +|..+..+..+ .
T Consensus 74 ~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~ 153 (358)
T 3hut_A 74 VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGL 153 (358)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHH
Confidence 4455555566667777788888999876521 10001 12344555575 44444332122 2
Q ss_pred HHHHHHHHHHhhCCCee----ecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEE
Q 043209 130 EEFRIVEELLNKIPTSF----NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKV 205 (221)
Q Consensus 130 ~~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kv 205 (221)
++.+..++..++.+..+ ..... . .. +.....+|.+ .++|.||++ +.+..+.++.+.+++.+-++.+
T Consensus 154 ~~~~~~~~~l~~~g~~v~~~~~~~~~-~-~~----~~~~~~~l~~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~ 223 (358)
T 3hut_A 154 SSAQAFRKAFELRGGAVVVNEEVPPG-N-RR----FDDVIDEIED---EAPQAIYLA-MAYEDAAPFLRALRARGSALPV 223 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECTT-C-CC----CHHHHHHHHH---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCCC-C-cc----HHHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcE
Confidence 33444445555552222 11111 1 11 1222333433 258988876 5566888999999998877888
Q ss_pred EEEeCC
Q 043209 206 YGVEPA 211 (221)
Q Consensus 206 igVe~~ 211 (221)
++....
T Consensus 224 ~~~~~~ 229 (358)
T 3hut_A 224 YGSSAL 229 (358)
T ss_dssp EECGGG
T ss_pred EecCcc
Confidence 876543
No 380
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=56.35 E-value=44 Score=27.70 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=65.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++++-|.. +.. ..+.+|++. + + .+ ++.++. +...+.-.
T Consensus 167 tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~--~--l~-------ell~~a-DvV~l~~P 228 (335)
T 2g76_A 167 TLGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L--P--LE-------EIWPLC-DFITVHTP 228 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C--C--HH-------HHGGGC-SEEEECCC
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C--C--HH-------HHHhcC-CEEEEecC
Confidence 47777899999999999999999877766543 232 345678753 1 1 22 344444 45544332
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHH--HHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS--GVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~--Gi~~~~~~ 198 (221)
.++... ..+..++++++ +++.+++-+|.|+..- .+..+++.
T Consensus 229 ~t~~t~----~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 229 LLPSTT----GLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCTTTT----TSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCHHHH----HhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 232221 12335677777 4689999999998644 66777765
No 381
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=56.31 E-value=49 Score=27.11 Aligned_cols=49 Identities=24% Similarity=0.342 Sum_probs=30.1
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecCC--CCH---HHHHHHHHcCCEE
Q 043209 71 TVLIECTSGNTG---IGMACFAAAKGYKLILVMPAF--MSL---EKRIILQAYGAQL 119 (221)
Q Consensus 71 ~~vv~assGN~~---~alA~~a~~~g~~~~ivvp~~--~~~---~~~~~l~~~Ga~V 119 (221)
+.+|.++.||.| .++|...+..|+++.++++.. ... ...+.++..|..+
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCcc
Confidence 567778888876 444445555699999987652 222 2344455556554
No 382
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=56.27 E-value=44 Score=29.44 Aligned_cols=97 Identities=14% Similarity=0.183 Sum_probs=59.0
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCC
Q 043209 64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIP 143 (221)
Q Consensus 64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~ 143 (221)
+...+|++ |+..+.|+-|..+|..++.+|.+++++- .+..+....+.+|+++ + ++++ ..++.
T Consensus 269 ~~~l~Gkt-V~IiG~G~IG~~~A~~lka~Ga~Viv~d---~~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGGKK-VLICGYGDVGKGCAEAMKGQGARVSVTE---IDPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCcCE-EEEEccCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 33556665 7777889999999999999998655443 2456666677789874 1 1222 22333
Q ss_pred CeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhH
Q 043209 144 TSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT 188 (221)
Q Consensus 144 ~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~ 188 (221)
+.++... .+.. .+..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~at-gt~~-------~i~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTAT-GNKD-------IIMLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECS-SSSC-------SBCHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECC-CCHH-------HHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 4444432 1221 1223555666 45778888887764
No 383
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=56.26 E-value=60 Score=25.21 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=41.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
++.+|+..+|..|.+++......|.+++++........ ....+.++-. +.++..+..++..++.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~-d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDIT-DTEQVEQAYKEIEETH 85 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCC-CHHHHHHHHHHHHHHc
Confidence 56788889999999999999899998877764321111 1455555543 3444444555554443
No 384
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=55.68 E-value=69 Score=24.73 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=42.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc--C-CEE--EEeCCCCChhHHHHHHHHHHhhC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAY--G-AQL--ILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~--G-a~V--~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
+..+|+.++|--|.++|......|.+++++...... ....+.++.. + .++ +.+|-. +.++..+...+..++.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT-DCTKADTEIKDIHQKY 85 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC-CHHHHHHHHHHHHHhc
Confidence 567888899999999999988889987666533211 1122333332 2 344 444443 3445555555555543
No 385
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=55.67 E-value=32 Score=27.96 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=33.0
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
..+++++ .+.||+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 229 ~~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvGfD~~~ 277 (349)
T 1jye_A 229 TMQMLNE-GIVPTAMLVA--NDQMALGAMRAITESGLRVGADISVVGYDDTE 277 (349)
T ss_dssp HHHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEECSBCCG
T ss_pred HHHHHhC-CCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCcEEEEEECCcH
Confidence 3445544 3569999975 5678899999999987 368899987543
No 386
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=55.62 E-value=46 Score=26.36 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe-eecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccC
Q 043209 106 LEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIG 184 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G 184 (221)
....+.+...|++|+.++.+ .+...+.+.++.+..... .++ +. |....+ ....+..++.+++ +.+|.+|..+|
T Consensus 47 ~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~-g~iD~lvnnAG 120 (281)
T 4dry_A 47 RGIAQALSAEGYSVVITGRR--PDVLDAAAGEIGGRTGNIVRAV-VC-DVGDPD-QVAALFAAVRAEF-ARLDLLVNNAG 120 (281)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEE-EC-CTTCHH-HHHHHHHHHHHHH-SCCSEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCeEEEE-Ec-CCCCHH-HHHHHHHHHHHHc-CCCCEEEECCC
Confidence 34567777899999999875 333344444444332222 222 22 222333 4556777888888 67999999998
Q ss_pred ch
Q 043209 185 TG 186 (221)
Q Consensus 185 ~G 186 (221)
..
T Consensus 121 ~~ 122 (281)
T 4dry_A 121 SN 122 (281)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 387
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=55.61 E-value=51 Score=26.48 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=34.6
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
.+++ +..-+.|+.|.+++..++.+|.+++++-+. ..+.+.+..+|++++
T Consensus 156 ~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~~ 204 (300)
T 2rir_A 156 HGSQ-VAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVPF 204 (300)
T ss_dssp TTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEEE
T ss_pred CCCE-EEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeEE
Confidence 4454 777778999999999999999976666543 344444555676643
No 388
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=55.56 E-value=39 Score=25.21 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=36.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.+|+..+|..|.+++......|.+++++... ..+...+...+.+++..+-
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D~ 52 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKEP 52 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECCG
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEeccc
Confidence 5788889999999999998899988888643 4444444445666666553
No 389
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=55.53 E-value=22 Score=28.84 Aligned_cols=82 Identities=13% Similarity=-0.029 Sum_probs=44.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFK 152 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 152 (221)
|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.+.++.-..+..++...+....+++....
T Consensus 87 v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~ 165 (363)
T 3ffh_A 87 LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPN 165 (363)
T ss_dssp EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSC
T ss_pred EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCC
Confidence 777777777766665543 2222244444444556667788899999988754212111222222223333556664444
Q ss_pred CCc
Q 043209 153 NPA 155 (221)
Q Consensus 153 n~~ 155 (221)
||.
T Consensus 166 npt 168 (363)
T 3ffh_A 166 NPT 168 (363)
T ss_dssp TTT
T ss_pred CCc
Confidence 443
No 390
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=55.42 E-value=47 Score=25.68 Aligned_cols=50 Identities=8% Similarity=0.166 Sum_probs=34.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
+..+|+.++|--|.++|......|.+++++... ... ..+.++.++..+..
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~---~~~~~~~~~~~~~~ 59 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GED---VVADLGDRARFAAA 59 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS--CHH---HHHHTCTTEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc--hHH---HHHhcCCceEEEEC
Confidence 567888888999999999988899987776542 222 22345666665543
No 391
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=55.35 E-value=24 Score=29.55 Aligned_cols=36 Identities=39% Similarity=0.510 Sum_probs=29.9
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
+.++++ |..-++|..|+.++.+++.+|++++++-|.
T Consensus 11 ~~~~k~-IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 11 ILPGKT-IGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CCTTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 345554 788889999999999999999999988754
No 392
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=55.24 E-value=69 Score=27.58 Aligned_cols=50 Identities=20% Similarity=0.276 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 51 RIAFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|++.+.+..+.+ .|.--.|+ +|+..+.||-|..+|.....+|.+++.+..
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~gk-~vaVqG~GnVG~~~a~~L~~~GakVVavsD 249 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRGA-RVVVQGLGQVGAAVALHAERLGMRVVAVAT 249 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTTC-EEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCccCC-EEEEECcCHHHHHHHHHHHHCCCEEEEEEc
Confidence 577767766544 44322344 488888999999999999999998885553
No 393
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=55.21 E-value=60 Score=27.38 Aligned_cols=45 Identities=13% Similarity=0.120 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHcCCeEEEEecC-C--CCHHHHHHHH----HcCCEEEEeCC
Q 043209 80 NTGIGMACFAAAKGYKLILVMPA-F--MSLEKRIILQ----AYGAQLILTNA 124 (221)
Q Consensus 80 N~~~alA~~a~~~g~~~~ivvp~-~--~~~~~~~~l~----~~Ga~V~~v~~ 124 (221)
|.+.|++.++.++|++++++.|+ . .+..-++.++ ..|..+..+..
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 258 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHD 258 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 89999999999999999999998 4 3333333333 66777766543
No 394
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=54.89 E-value=22 Score=29.81 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=29.0
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++++ |...++|..|+.++.+|+.+|++++++-|.
T Consensus 11 ~~~~-IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 11 FGAT-IGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp TTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4444 888889999999999999999999988764
No 395
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=54.69 E-value=43 Score=26.72 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=22.7
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 043209 71 TVLIECTSGNTG---IGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 71 ~~vv~assGN~~---~alA~~a~~~g~~~~ivvp~ 102 (221)
+.+|.++.||.| .++|...+..|+++.++++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 567888888876 34444455569999998754
No 396
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.57 E-value=32 Score=26.18 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=26.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcC--CeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKG--YKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g--~~~~ivvp~ 102 (221)
++.+|+.++|..|.+++......| .+++++...
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 566888888999999999988889 877776643
No 397
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.57 E-value=40 Score=23.84 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=25.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++..+.|..|..++......|.+++++-+.
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 566678999999999988899998888764
No 398
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=54.37 E-value=48 Score=25.67 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCC---CeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEc
Q 043209 106 LEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIP---TSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p 182 (221)
....+.+...|++|+.++.+ .+...+.+.++.+..+ ...++ +. |....+ ....+..++.+++ +.+|.+|..
T Consensus 21 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~~~-~v~~~~~~~~~~~-g~iD~lvnn 94 (250)
T 3nyw_A 21 AVIAAGLATDGYRVVLIARS--KQNLEKVHDEIMRSNKHVQEPIVL-PL-DITDCT-KADTEIKDIHQKY-GAVDILVNA 94 (250)
T ss_dssp HHHHHHHHHHTCEEEEEESC--HHHHHHHHHHHHHHCTTSCCCEEE-EC-CTTCHH-HHHHHHHHHHHHH-CCEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHHhccccCcceEE-ec-cCCCHH-HHHHHHHHHHHhc-CCCCEEEEC
Confidence 34566777889999999875 3344444455544321 22222 12 222333 4456777888887 679999999
Q ss_pred cCc
Q 043209 183 IGT 185 (221)
Q Consensus 183 ~G~ 185 (221)
+|.
T Consensus 95 Ag~ 97 (250)
T 3nyw_A 95 AAM 97 (250)
T ss_dssp CCC
T ss_pred CCc
Confidence 986
No 399
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=54.21 E-value=27 Score=27.06 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=27.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 56788889999999999999889998776653
No 400
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=54.17 E-value=97 Score=26.00 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=69.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+-|+.|.++|..++.+|++++.+-|.. +. ......|++. . + . .++.++. +...+.-.
T Consensus 178 tvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~--~--l-------~ell~~a-DvV~l~~P 239 (365)
T 4hy3_A 178 EIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A--S--L-------EDVLTKS-DFIFVVAA 239 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C--C--H-------HHHHHSC-SEEEECSC
T ss_pred EEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C--C--H-------HHHHhcC-CEEEEcCc
Confidence 48888999999999999999999887776552 32 2334567652 1 1 2 2344444 45554333
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHhcCCCcEEEEEeC
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV--SGVGNFLKKKNPEIKVYGVEP 210 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~--~Gi~~~~~~~~~~~kvigVe~ 210 (221)
.++.+. ..+..+.++++ +++.+++-++.|+.. ..++.+++. ..+. -+.+.
T Consensus 240 lt~~T~----~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV 291 (365)
T 4hy3_A 240 VTSENK----RFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDV 291 (365)
T ss_dssp SSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESC
T ss_pred CCHHHH----hhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeC
Confidence 333221 23456778887 568999999998864 556666654 3344 44443
No 401
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=53.62 E-value=14 Score=30.23 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=26.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
|+..++|-.|.++|+..++.|++++++=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 8888999999999999999999998885
No 402
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=53.60 E-value=84 Score=25.09 Aligned_cols=64 Identities=19% Similarity=0.115 Sum_probs=40.4
Q ss_pred HHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209 53 AFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120 (221)
Q Consensus 53 a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~ 120 (221)
+.+.+..+.+ .+.-..+++ +..-+.|+.|.++|..++.+|.+++++-+. ..+.+.++.+|++++
T Consensus 138 ae~a~~~~l~~~~~~l~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 138 AEGTIMMAIQHTDFTIHGAN-VAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp HHHHHHHHHHHCSSCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHhcCCCCCCCE-EEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 3444444433 232234444 777788999999999999999976665443 334444556787653
No 403
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=53.46 E-value=26 Score=29.85 Aligned_cols=48 Identities=19% Similarity=0.065 Sum_probs=37.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+|+.-+.|..|..++..++.+|.+++++- .+..+++.++.+|++.+.+
T Consensus 186 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D---~~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 186 SALVLGVGVAGLQALATAKRLGAKTTGYD---VRPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEEEC---SSGGGHHHHHHTTCEECCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHcCCeEEec
Confidence 47778889999999999999999755443 3455677777899987643
No 404
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=53.33 E-value=78 Score=24.66 Aligned_cols=47 Identities=19% Similarity=0.369 Sum_probs=34.9
Q ss_pred hHHHHHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCC-CcEEEEEeCC
Q 043209 163 TTGPEIWEGTR-GQVDIFVSGIGTGGTVSGVGNFLKKKNP-EIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~-~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-~~kvigVe~~ 211 (221)
....+++++.+ .++|+|||. +..++.|+..++++.+. ++.|+|++..
T Consensus 190 ~~~~~~l~~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~ 238 (309)
T 2fvy_A 190 DKMDAWLSGPNANKIEVVIAN--NDAMAMGAVEALKAHNKSSIPVFGVDAL 238 (309)
T ss_dssp HHHHHHHTSTTGGGCCEEEES--SHHHHHHHHHHHHHTTCTTSCEECSBCC
T ss_pred HHHHHHHHhCCCCCccEEEEC--CchhHHHHHHHHHHcCCCCceEEecCCC
Confidence 34556665532 268999974 56778899999999887 8999988653
No 405
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=53.30 E-value=78 Score=24.64 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=28.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++|.-|.+++......|.+++++...
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 567899999999999999999999987777644
No 406
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=53.03 E-value=52 Score=25.11 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
++.+|+..+|..|.+++......|.+++++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 56788888899999999998889998776653
No 407
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=52.97 E-value=17 Score=30.04 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=26.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
|+..++|-.|.++|...++.|++++||=
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 8888999999999999999999999883
No 408
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=52.24 E-value=54 Score=25.32 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=41.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeCCCC-ChhHHHHHHHHHHh
Q 043209 70 KTVLIECTSGNTGIGMACFAAA---KGYKLILVMPAFMS-LEKRIILQAY--GAQLILTNAEM-GIDEEFRIVEELLN 140 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~---~g~~~~ivvp~~~~-~~~~~~l~~~--Ga~V~~v~~~~-~~~~~~~~a~~~~~ 140 (221)
+..+|+..+|-.|.+++..... .|.+++++...... ....+.++.. |.++..+..+- +.++..+...+..+
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 5668888889999999988877 78887766533111 1112233332 66776554331 23344444555544
No 409
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=52.21 E-value=80 Score=24.41 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=80.5
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH--HHHHcCCeEEEEecCC-----CCHHHHHHHHHcCCEEE
Q 043209 48 VKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC--FAAAKGYKLILVMPAF-----MSLEKRIILQAYGAQLI 120 (221)
Q Consensus 48 ~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~--~a~~~g~~~~ivvp~~-----~~~~~~~~l~~~Ga~V~ 120 (221)
|=.+....+-..+.+.|. ..++..+..+....... .....++..+|++|.. .....++.++..|-.|+
T Consensus 29 ~~~~~~~gi~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV 103 (298)
T 3tb6_A 29 IFPSIIRGIESYLSEQGY-----SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFA 103 (298)
T ss_dssp THHHHHHHHHHHHHHTTC-----EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEE
Confidence 444555555566666663 43444444444333222 2334578888887753 23455667777788887
Q ss_pred EeCCCC----------ChhHHHH-HHHHHHhhCCC-eeecCCCCCCcc--HHHHH-------------------------
Q 043209 121 LTNAEM----------GIDEEFR-IVEELLNKIPT-SFNPHQFKNPAN--PKTHY------------------------- 161 (221)
Q Consensus 121 ~v~~~~----------~~~~~~~-~a~~~~~~~~~-~~~~~~~~n~~~--~~~g~------------------------- 161 (221)
.++... +...... .++.+.+.... ..++....+... ...|+
T Consensus 104 ~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~ 183 (298)
T 3tb6_A 104 MINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKE 183 (298)
T ss_dssp EESSCCTTCSSCEEEECHHHHHHHHHHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHTTCCCCGGGEEEECHHHHT
T ss_pred EEecCcCCCCCCEEEeCcHHHHHHHHHHHHHCCCCcEEEEcCCCCccHHHHHHHHHHHHHHcCCCCCcceEEEecccchh
Confidence 775421 1112222 22333332211 122221111100 00111
Q ss_pred ---hhHHHHHHHhhCCC--CCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 162 ---ETTGPEIWEGTRGQ--VDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 162 ---~t~~~Ei~~q~~~~--~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
.....+++++. ++ +|+|||. +..++.|+..++++.+ .++.|+|++..
T Consensus 184 ~~~~~~~~~~l~~~-~~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 239 (298)
T 3tb6_A 184 SKLLEKVKATLEKN-SKHMPTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYDDS 239 (298)
T ss_dssp THHHHHHHHHHHHT-TTSCCSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSBCC
T ss_pred hhHHHHHHHHHhcC-CCCCCeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecCCc
Confidence 12233444443 45 8999965 5677889999999987 36889988754
No 410
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=51.89 E-value=63 Score=25.93 Aligned_cols=145 Identities=10% Similarity=0.037 Sum_probs=74.1
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC---------------CCCHH-----HHHHH-
Q 043209 54 FSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA---------------FMSLE-----KRIIL- 112 (221)
Q Consensus 54 ~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~---------------~~~~~-----~~~~l- 112 (221)
...+..+.+++. ..|+...++....+++-.+...+++++..... ..+.. -.+.+
T Consensus 59 ~~~~~~l~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (356)
T 3ipc_A 59 ISVANKFVADGV-----KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLA 133 (356)
T ss_dssp HHHHHHHHHTTC-----CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-----cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHH
Confidence 334444455553 33666666666677778888899987653210 01111 12223
Q ss_pred HHcCC-EEEEeCCCCChh-HHHHHHHHHHhhCCCee-ecCCCC-CCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhH
Q 043209 113 QAYGA-QLILTNAEMGID-EEFRIVEELLNKIPTSF-NPHQFK-NPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT 188 (221)
Q Consensus 113 ~~~Ga-~V~~v~~~~~~~-~~~~~a~~~~~~~~~~~-~~~~~~-n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~ 188 (221)
+.+|. +|..+..+..+. +..+..++..++.+..+ ....+. +.. .+.....+|.+ .++|.||++ +++..
T Consensus 134 ~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~----d~~~~~~~l~~---~~~d~v~~~-~~~~~ 205 (356)
T 3ipc_A 134 DHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDK----DFSALISKMKE---AGVSIIYWG-GLHTE 205 (356)
T ss_dssp HHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECCTTCC----CCHHHHHHHHH---TTCCEEEEE-SCHHH
T ss_pred HhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeCCCCC----CHHHHHHHHHh---cCCCEEEEc-cCchH
Confidence 34475 454444332222 23333444455542211 101111 111 11222333333 358988865 45667
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCC
Q 043209 189 VSGVGNFLKKKNPEIKVYGVEPA 211 (221)
Q Consensus 189 ~~Gi~~~~~~~~~~~kvigVe~~ 211 (221)
+.++.+.+++.+-.+++++....
T Consensus 206 a~~~~~~~~~~g~~~~~~~~~~~ 228 (356)
T 3ipc_A 206 AGLIIRQAADQGLKAKLVSGDGI 228 (356)
T ss_dssp HHHHHHHHHHHTCCCEEEECGGG
T ss_pred HHHHHHHHHHCCCCCcEEEeccc
Confidence 78999999998888888876543
No 411
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=51.68 E-value=38 Score=27.33 Aligned_cols=84 Identities=10% Similarity=0.051 Sum_probs=42.3
Q ss_pred EEEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHH---HHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe
Q 043209 72 VLIECTSGNTGIGMACFAAAK---GYKLILVMPAFMSLEK---RIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS 145 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~---g~~~~ivvp~~~~~~~---~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~ 145 (221)
.++..++|..+..++..+-.. +-.-.|+++...-... ...++..|++++.++.+.+..-..+..++..++....
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 141 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTIL 141 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEE
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceE
Confidence 477777777666666554321 2223455555433433 3345567999999875422211112222222333345
Q ss_pred eecCCCCCCc
Q 043209 146 FNPHQFKNPA 155 (221)
Q Consensus 146 ~~~~~~~n~~ 155 (221)
+++....||.
T Consensus 142 v~~~~~~npt 151 (382)
T 4hvk_A 142 VSVQHANNEI 151 (382)
T ss_dssp EECCSBCTTT
T ss_pred EEEECCCCCc
Confidence 6665555554
No 412
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=51.59 E-value=10 Score=35.49 Aligned_cols=39 Identities=18% Similarity=0.392 Sum_probs=31.8
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
+.+.+.+|++.+|.+.+|..|.+....|+.+|.++++..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~ 377 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 446788888867777789999999999999999876654
No 413
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=51.57 E-value=53 Score=27.26 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC----CHHHHHHHHH------cCCEEEEeCC
Q 043209 79 GNTGIGMACFAAAKGYKLILVMPAFM----SLEKRIILQA------YGAQLILTNA 124 (221)
Q Consensus 79 GN~~~alA~~a~~~g~~~~ivvp~~~----~~~~~~~l~~------~Ga~V~~v~~ 124 (221)
.|.++|+..++.++|++++++.|+.. +..-++.++. .|+.+..+..
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d 227 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHD 227 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESS
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcC
Confidence 69999999999999999999999853 2333333332 5887776643
No 414
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=51.31 E-value=84 Score=24.39 Aligned_cols=47 Identities=6% Similarity=0.157 Sum_probs=35.1
Q ss_pred hHHHHHHH-hhCC-CCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 163 TTGPEIWE-GTRG-QVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 163 t~~~Ei~~-q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
....++++ +- + ++|+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 175 ~~~~~~l~~~~-~~~~~ai~~~--~d~~a~g~~~al~~~G~~vP~di~vig~d~~~ 227 (287)
T 3bbl_A 175 AMTLHLLDLSP-ERRPTAIMTL--NDTMAIGAMAAARERGLTIGTDLAIIGFDDAP 227 (287)
T ss_dssp HHHHHHHTSCT-TTSCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCCT
T ss_pred HHHHHHHhhCC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCCEEEEEECCch
Confidence 34556665 43 5 68999974 5678889999999876 368899998754
No 415
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=51.07 E-value=60 Score=25.33 Aligned_cols=56 Identities=23% Similarity=0.165 Sum_probs=36.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHc--CCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAY--GAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~--Ga~V~~v~~ 124 (221)
+++.+|+.++|--|.++|......|.+++++-.... .....+.++.. +..+..+..
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 68 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEec
Confidence 366788888899999999998889998776653321 11223344443 466665543
No 416
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=50.67 E-value=34 Score=28.40 Aligned_cols=61 Identities=21% Similarity=0.161 Sum_probs=38.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 043209 62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ----AYGAQLILTN 123 (221)
Q Consensus 62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~----~~Ga~V~~v~ 123 (221)
+.|.+. |.+..+..-..|.++|+..++.++|++++++.|+.. +...++.++ ..|+.+..+.
T Consensus 149 ~~g~l~-gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 149 HYSSLK-GLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HHSCCT-TCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-CcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 345443 344333333367999999999999999999999863 443333333 4676666553
No 417
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=50.42 E-value=67 Score=28.12 Aligned_cols=50 Identities=10% Similarity=-0.025 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 51 RIAFSMIKDAEEKGLIT-PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~~g~~~-~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|++.+.+..+.+.-... .|+ +|+..+.||-|..+|.....+|.+++.+..
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g~-~vaVqG~GnVG~~~a~~L~~~GakvVavsD 283 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEKQ-TAVVSGSGNVALYCVQKLLHLNVKVLTLSD 283 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGGC-EEEEECSSHHHHHHHHHHHHTTCEECEEEE
T ss_pred HHHHHHHHHHHHhccCCcCCC-EEEEECCcHHHHHHHHHHHHCCCEEEEEEe
Confidence 57777777765532222 344 488888999999999999999998885543
No 418
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=49.98 E-value=74 Score=23.42 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=35.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.+|+..+|..|.+++......|.+++++.... .+...+. .+.+++..+-
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~-~~~~~~~~D~ 51 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA---GKITQTH-KDINILQKDI 51 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS---HHHHHHC-SSSEEEECCG
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc---hhhhhcc-CCCeEEeccc
Confidence 47888899999999999999999888887542 3333333 5677766653
No 419
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=49.94 E-value=66 Score=24.37 Aligned_cols=53 Identities=19% Similarity=0.216 Sum_probs=36.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-H-cCCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-A-YGAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~-~Ga~V~~v~~ 124 (221)
+++.+|+..+|..|.+++......|.+++++... ..+.+.+. . .+.+++.++-
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIEPVCVDL 61 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCCCEEEEeC
Confidence 3667888899999999999998899987766532 33333322 2 2667665554
No 420
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=49.75 E-value=93 Score=26.98 Aligned_cols=50 Identities=26% Similarity=0.236 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 51 RIAFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|++.+.+..+.+ .|.--.|++ |+..+.||-|..++.....+|.+++.+..
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g~~-vaVqGfGnVG~~~a~~L~e~GakvVavsD 266 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEGAR-VAIQGFGNVGNAAARAFHDHGARVVAVQD 266 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCccCCE-EEEeccCHHHHHHHHHHHHCCCEEEEEEc
Confidence 567767666554 443223444 77888999999999999999998886653
No 421
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=49.72 E-value=59 Score=25.72 Aligned_cols=72 Identities=11% Similarity=0.075 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCc
Q 043209 107 EKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185 (221)
Q Consensus 107 ~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~ 185 (221)
...+.+...|++|+.++.+..- ...++++.+..+...++ +.| -.... ....+..++.+++ +.+|.+|-.+|.
T Consensus 22 aia~~la~~Ga~Vv~~~r~~~~---~~~~~~~~~~~~~~~~~-~~D-v~~~~-~v~~~v~~~~~~~-G~iDiLVNnAGi 93 (258)
T 4gkb_A 22 AISMRLAEERAIPVVFARHAPD---GAFLDALAQRQPRATYL-PVE-LQDDA-QCRDAVAQTIATF-GRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHHHHTTCEEEEEESSCCC---HHHHHHHHHHCTTCEEE-ECC-TTCHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHcCCEEEEEECCccc---HHHHHHHHhcCCCEEEE-Eee-cCCHH-HHHHHHHHHHHHh-CCCCEEEECCCC
Confidence 4456777899999998875321 23344454544334333 222 22232 4456778888888 689999999984
No 422
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=49.65 E-value=80 Score=23.71 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=35.5
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEeCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLILTNA 124 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~v~~ 124 (221)
|+..+.|+.|..++......|.+++++-. +..+.+.+. ..|..++.-+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 56666899999999999989998887753 455555543 46777765544
No 423
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=49.41 E-value=1e+02 Score=24.98 Aligned_cols=106 Identities=18% Similarity=0.176 Sum_probs=65.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeee
Q 043209 68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFN 147 (221)
Q Consensus 68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~ 147 (221)
.|++ |..-+.|+.|.++|..++.+|++++++-+.. ... ..+.+|++. + + .+ ++.++. +...
T Consensus 141 ~g~~-vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~--~--l~-------ell~~a-DvVv 201 (313)
T 2ekl_A 141 AGKT-IGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V--S--LE-------ELLKNS-DVIS 201 (313)
T ss_dssp TTCE-EEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C--C--HH-------HHHHHC-SEEE
T ss_pred CCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c--C--HH-------HHHhhC-CEEE
Confidence 3444 7777899999999999999999877665543 222 245678763 2 1 22 233343 4454
Q ss_pred cCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHH--HHHHHHHh
Q 043209 148 PHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS--GVGNFLKK 198 (221)
Q Consensus 148 ~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~--Gi~~~~~~ 198 (221)
+.-..++... ..+..+.++++ +++.+++-+++|+..- .+..+++.
T Consensus 202 l~~P~~~~t~----~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 202 LHVTVSKDAK----PIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp ECCCCCTTSC----CSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred EeccCChHHH----HhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 4332222211 12234666777 4689999999998655 66777764
No 424
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=49.02 E-value=44 Score=27.11 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=42.2
Q ss_pred eEEEeeCCChHHHHHHHHHHH----cCCeEEEEecCC-CCHHH-HHHHHHcCCEEEEeCC-CCChh-HHHHHHHHHHhhC
Q 043209 71 TVLIECTSGNTGIGMACFAAA----KGYKLILVMPAF-MSLEK-RIILQAYGAQLILTNA-EMGID-EEFRIVEELLNKI 142 (221)
Q Consensus 71 ~~vv~assGN~~~alA~~a~~----~g~~~~ivvp~~-~~~~~-~~~l~~~Ga~V~~v~~-~~~~~-~~~~~a~~~~~~~ 142 (221)
..++..++|..+..++..+-. -|- .|+++.. ..... ...++..|++++.++. +.++. +..+..+.+.++.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd--~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 137 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNK--NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS 137 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCC--EEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCC--eEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCC
Confidence 347777777777776666542 232 3333322 22222 3567889999999875 32221 1222222222223
Q ss_pred CCeeecCCCCCC
Q 043209 143 PTSFNPHQFKNP 154 (221)
Q Consensus 143 ~~~~~~~~~~n~ 154 (221)
...+++....|+
T Consensus 138 ~~~v~~~~~~np 149 (385)
T 2bkw_A 138 YGAVTVTHVDTS 149 (385)
T ss_dssp CSEEEEESEETT
T ss_pred CCEEEEEccCCC
Confidence 456666544444
No 425
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=48.90 E-value=39 Score=28.97 Aligned_cols=48 Identities=15% Similarity=0.154 Sum_probs=36.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v 122 (221)
+|+.-+.|..|..++..++.+|.+++++- ....+++.++.+|++.+.+
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D---~~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSATD---VRPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC---SSTTHHHHHHHTTCEECCC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEc---CCHHHHHHHHHcCCceeec
Confidence 47888889999999999999999755443 2345677777899986544
No 426
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=48.77 E-value=1e+02 Score=24.69 Aligned_cols=33 Identities=21% Similarity=0.029 Sum_probs=28.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++|..|.+++......|.+++++...
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567888899999999999998899998888754
No 427
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=48.68 E-value=88 Score=25.81 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=64.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++++-+... ... ...|++. ++ . .++.++. +.+.+.-.
T Consensus 143 tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~----~~~g~~~--~~----l-------~ell~~a-DvV~l~~P 203 (334)
T 2pi1_A 143 TLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR-EDL----KEKGCVY--TS----L-------DELLKES-DVISLHVP 203 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-HHH----HHTTCEE--CC----H-------HHHHHHC-SEEEECCC
T ss_pred eEEEECcCHHHHHHHHHHHHCcCEEEEECCCcc-hhh----HhcCcee--cC----H-------HHHHhhC-CEEEEeCC
Confidence 477888999999999999999999887766532 221 1345542 11 1 2334444 45554333
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT--VSGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~--~~Gi~~~~~~ 198 (221)
.++.+. ..+..+.++++ ++..+++-+|.|+. -..+..+++.
T Consensus 204 ~t~~t~----~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 204 YTKETH----HMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp CCTTTT----TCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CChHHH----HhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 233221 23445777887 57899999999885 4556666654
No 428
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=48.60 E-value=63 Score=24.46 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=36.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH--HcCCEEEEeCC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ--AYGAQLILTNA 124 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~--~~Ga~V~~v~~ 124 (221)
+++.+|+..+|..|.+++......|.+++++... ..+.+.+. ..+.+++.++-
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKECPGIEPVCVDL 61 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhccCCCcEEecC
Confidence 3567889999999999999998899987666543 23333222 23667765554
No 429
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=48.35 E-value=85 Score=23.60 Aligned_cols=67 Identities=24% Similarity=0.232 Sum_probs=41.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc-CCEEEEeCCCCChhHHHHHHHHHHh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AY-GAQLILTNAEMGIDEEFRIVEELLN 140 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~-Ga~V~~v~~~~~~~~~~~~a~~~~~ 140 (221)
++.+|+..+|..|.+++......|.+++++... ..+.+.+. .+ ...++.++-. +.++..+...+..+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARD---EKRLQALAAELEGALPLPGDVR-EEGDWARAVAAMEE 74 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhhhceEEEecCC-CHHHHHHHHHHHHH
Confidence 566888889999999999988899987766543 33333322 22 4556655543 23344444444433
No 430
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=48.22 E-value=1e+02 Score=24.54 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=32.8
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPA 211 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~ 211 (221)
...+++++ .+++|+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 224 ~~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~D~~ 269 (342)
T 1jx6_A 224 AAKASLAK-HPDVDFIYAC--STDVALGAVDALAELGREDIMINGWGGG 269 (342)
T ss_dssp HHHHHHHH-CCCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSBCC
T ss_pred HHHHHHHh-CCCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEeCCC
Confidence 34455554 3579999974 5677889999999877 47888887654
No 431
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=48.20 E-value=49 Score=26.55 Aligned_cols=86 Identities=19% Similarity=0.211 Sum_probs=51.6
Q ss_pred cCCeEEEEecCC--CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209 92 KGYKLILVMPAF--MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW 169 (221)
Q Consensus 92 ~g~~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 169 (221)
+.=|+.+|.-.. .-..-.+.+...||+|+.++.+ -+...+.++++ ....+++ +. |....+ ....+..++.
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~--~~~l~~~~~~~---g~~~~~~-~~-Dv~~~~-~v~~~~~~~~ 98 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR--KDVLDAAIAEI---GGGAVGI-QA-DSANLA-ELDRLYEKVK 98 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHH---CTTCEEE-EC-CTTCHH-HHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHc---CCCeEEE-Ee-cCCCHH-HHHHHHHHHH
Confidence 434566665432 2245567788999999999875 22333333333 1122322 22 222333 4566778888
Q ss_pred HhhCCCCCEEEEccCch
Q 043209 170 EGTRGQVDIFVSGIGTG 186 (221)
Q Consensus 170 ~q~~~~~d~vv~p~G~G 186 (221)
+++ +.+|.+|..+|.+
T Consensus 99 ~~~-G~iDiLVNNAG~~ 114 (273)
T 4fgs_A 99 AEA-GRIDVLFVNAGGG 114 (273)
T ss_dssp HHH-SCEEEEEECCCCC
T ss_pred HHc-CCCCEEEECCCCC
Confidence 888 6899999999864
No 432
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=48.18 E-value=70 Score=26.35 Aligned_cols=104 Identities=14% Similarity=0.050 Sum_probs=64.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQF 151 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 151 (221)
+|..-+.|+.|.++|..++.+|++++++-+....... ...+|++ .+ + .+ ++.++. +...+.-.
T Consensus 147 tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~---~~~~g~~--~~--~--l~-------ell~~a-DvV~l~~P 209 (330)
T 4e5n_A 147 TVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQT---EQRLGLR--QV--A--CS-------ELFASS-DFILLALP 209 (330)
T ss_dssp EEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHH---HHHHTEE--EC--C--HH-------HHHHHC-SEEEECCC
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhH---HHhcCce--eC--C--HH-------HHHhhC-CEEEEcCC
Confidence 4888889999999999999999987777655323322 2345642 11 1 22 233444 45554332
Q ss_pred CCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 043209 152 KNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT--VSGVGNFLKK 198 (221)
Q Consensus 152 ~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~--~~Gi~~~~~~ 198 (221)
.++.. ...+..+.++++ +++.+++-+|.|+. -..+..+++.
T Consensus 210 ~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 210 LNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 23222 123446778887 47899999999885 4556666655
No 433
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=47.92 E-value=95 Score=24.05 Aligned_cols=45 Identities=9% Similarity=0.114 Sum_probs=33.3
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
...++++ .+++|+|||. +...+.|+..++++.+ .++.|+|.+...
T Consensus 176 ~~~~~l~--~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 224 (290)
T 3clk_A 176 AMKAFGK--NTDLTGIIAA--SDMTAIGILNQASSFGIEVPKDLSIVSIDGTE 224 (290)
T ss_dssp HHHHHCT--TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred HHHHHhc--cCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCChH
Confidence 3344444 4679999974 5668889999999876 368899998654
No 434
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=47.87 E-value=14 Score=31.10 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=35.2
Q ss_pred HHhhHHHHHHHhhCCCCCEEE--EccCchhHHHHHHHHHHhcCCCcEEEEEeCC
Q 043209 160 HYETTGPEIWEGTRGQVDIFV--SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPA 211 (221)
Q Consensus 160 g~~t~~~Ei~~q~~~~~d~vv--~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~ 211 (221)
|...+-.|+++.+..+++.++ +.+|+||....+ ++...|+-+|+|++-.
T Consensus 41 H~pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~i---L~~lg~~GrVig~D~D 91 (347)
T 3tka_A 41 HTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLI---LSQLGEEGRLLAIDRD 91 (347)
T ss_dssp -CCTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHH---HTTCCTTCEEEEEESC
T ss_pred cccccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHH---HHhCCCCCEEEEEECC
Confidence 556677899999976776444 678999987665 3444678899998754
No 435
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=47.83 E-value=1.3e+02 Score=25.73 Aligned_cols=50 Identities=20% Similarity=0.066 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEec
Q 043209 51 RIAFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp 101 (221)
|++.+.+..+.+ .|.--.++ +|+..+.||-|..++..... +|.+++.+..
T Consensus 190 ~Gv~~~~~~~~~~~g~~l~g~-~vaVqG~GnVG~~~a~~L~e~~GakvVavsD 241 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGIDPKKA-TVAVQGFGNVGQFAALLISQELGSKVVAVSD 241 (415)
T ss_dssp HHHHHHHHHHHHHTTCCTTTC-EEEEECCSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcCCC-EEEEECCcHHHHHHHHHHHHhcCCEEEEEEe
Confidence 577777776654 44322344 48888899999999988777 8888886653
No 436
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=47.76 E-value=96 Score=24.07 Aligned_cols=37 Identities=8% Similarity=0.145 Sum_probs=29.2
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
+++|+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 196 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 236 (293)
T 2iks_A 196 PMPQALFTT--SFALLQGVMDVTLRRDGKLPSDLAIATFGDNE 236 (293)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHHHSSCCSSCEEEEESCCG
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence 468999974 5677889999998875 368899998654
No 437
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=47.65 E-value=76 Score=24.54 Aligned_cols=12 Identities=17% Similarity=0.362 Sum_probs=9.2
Q ss_pred CCcEEEEEeCCC
Q 043209 201 PEIKVYGVEPAE 212 (221)
Q Consensus 201 ~~~kvigVe~~~ 212 (221)
..++|..|.|..
T Consensus 195 ~gi~v~~v~PG~ 206 (266)
T 3o38_A 195 FGVRINAVSPSI 206 (266)
T ss_dssp GTEEEEEEEECC
T ss_pred cCcEEEEEeCCc
Confidence 468999998853
No 438
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=47.59 E-value=81 Score=25.26 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=25.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
++.+|+.++|..|.+++......|.+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID 33 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4567888889999999988888888887775
No 439
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=47.43 E-value=1e+02 Score=24.41 Aligned_cols=142 Identities=8% Similarity=0.038 Sum_probs=75.9
Q ss_pred HHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-------------CCH-----HHHHHHHHcC
Q 043209 55 SMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-------------MSL-----EKRIILQAYG 116 (221)
Q Consensus 55 ~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-------------~~~-----~~~~~l~~~G 116 (221)
..+..+.++.. -..|+...+.....+++-.+...+++++.+.... .+. .-.+.+..+|
T Consensus 59 ~~~~~l~~~~~----v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 134 (362)
T 3snr_A 59 TNARRFVTESK----ADVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKNN 134 (362)
T ss_dssp HHHHHHHHTSC----CSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccC----ceEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhcC
Confidence 34445555521 2336655556666677778888899887643110 011 1234566677
Q ss_pred C-EEEEeCCCCCh-hHHHHHHHHHHhhCCCee----ecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHH
Q 043209 117 A-QLILTNAEMGI-DEEFRIVEELLNKIPTSF----NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS 190 (221)
Q Consensus 117 a-~V~~v~~~~~~-~~~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~ 190 (221)
. +|..+..+..+ .++.+..++..++.+..+ +.... .. .. .....+|.+ .++|+||+. +.+..+.
T Consensus 135 ~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~-~~-~~----~~~~~~l~~---~~~dav~~~-~~~~~a~ 204 (362)
T 3snr_A 135 VKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFARP-DT-SV----AGQALKLVA---ANPDAILVG-ASGTAAA 204 (362)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTT-CS-CC----HHHHHHHHH---HCCSEEEEE-CCHHHHH
T ss_pred CCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecCCC-CC-CH----HHHHHHHHh---cCCCEEEEe-cCcchHH
Confidence 5 44445333222 233444455555553321 11111 11 11 122233333 258998875 4677889
Q ss_pred HHHHHHHhcCCCcEEEEEeC
Q 043209 191 GVGNFLKKKNPEIKVYGVEP 210 (221)
Q Consensus 191 Gi~~~~~~~~~~~kvigVe~ 210 (221)
++.+.+++.+-.++++++..
T Consensus 205 ~~~~~~~~~g~~~p~i~~~g 224 (362)
T 3snr_A 205 LPQTTLRERGYNGLIYQTHG 224 (362)
T ss_dssp HHHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHHcCCCccEEeccC
Confidence 99999999887777776643
No 440
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=47.33 E-value=98 Score=24.02 Aligned_cols=46 Identities=7% Similarity=0.062 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
...+++++- +++|+||| .+..++.|+..++++.+ .++.|+|++...
T Consensus 179 ~~~~~l~~~-~~~~ai~~--~~d~~A~g~~~al~~~G~~vP~di~vvg~D~~~ 228 (290)
T 2rgy_A 179 ATCQLLESK-APFTGLFC--ANDTMAVSALARFQQLGISVPGDVSVIGYDDDY 228 (290)
T ss_dssp HHHHHHHHT-CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred HHHHHHhCC-CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEeCCch
Confidence 445666553 57999996 46677889999999887 368899998654
No 441
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=47.31 E-value=28 Score=28.07 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=30.4
Q ss_pred eEEEeeCCChHHH---HHHHHHHHcCCeEEEEecCC-CCH---HHHHHHHHcCCEE
Q 043209 71 TVLIECTSGNTGI---GMACFAAAKGYKLILVMPAF-MSL---EKRIILQAYGAQL 119 (221)
Q Consensus 71 ~~vv~assGN~~~---alA~~a~~~g~~~~ivvp~~-~~~---~~~~~l~~~Ga~V 119 (221)
+.+|.++.||.|- .+|...+..|+++.++++.. .+. ...+.++.+|..+
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSCCSSHHHHHHHHHHHHTTCCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCCCCCHHHHHHHHHHHHcCCcE
Confidence 5677888888763 44444555699999988653 222 2344556666554
No 442
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=47.18 E-value=54 Score=27.52 Aligned_cols=52 Identities=21% Similarity=0.167 Sum_probs=38.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC------CH----HHHHHHHHcCCEEEE
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM------SL----EKRIILQAYGAQLIL 121 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~------~~----~~~~~l~~~Ga~V~~ 121 (221)
+++ ++.-++|+.|.-+|...+.+|.+++++.+... +. ...+.++..|.+++.
T Consensus 145 ~~~-vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 145 QSR-LLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCe-EEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 344 77789999999999999999999999876531 11 124456778877654
No 443
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=47.10 E-value=46 Score=26.90 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=31.0
Q ss_pred EEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHH---HHHHHHcCCEEEEeCCC
Q 043209 73 LIECTSGNTGIGMACFAAAK---GYKLILVMPAFMSLEK---RIILQAYGAQLILTNAE 125 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~---g~~~~ivvp~~~~~~~---~~~l~~~Ga~V~~v~~~ 125 (221)
++..++|..+..++..+-.. .-.-.|+++...-... ...++..|++++.++.+
T Consensus 64 v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (384)
T 1eg5_A 64 IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD 122 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC
T ss_pred EEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC
Confidence 67777777777666655431 1122455555433333 33347789999988753
No 444
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=46.74 E-value=1.6e+02 Score=31.53 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=48.5
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C-C---HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHH
Q 043209 66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-M-S---LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEEL 138 (221)
Q Consensus 66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~-~---~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~ 138 (221)
+.++++.+|+.++|-.|+++|......|.+.++++..+ . . ...++.++..|.+++.+..+ .+.++..+...+.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHH
Confidence 34567778888899999999999999999866666443 2 2 23355667789998876543 1233444444444
No 445
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=46.71 E-value=52 Score=25.67 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=28.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++|--|.+++......|.+++++...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567888888999999999998899988877644
No 446
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=46.64 E-value=34 Score=24.75 Aligned_cols=31 Identities=26% Similarity=0.416 Sum_probs=27.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
.++.-++|..|..+|...++.|.+++++-+.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3788899999999999999999999998754
No 447
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=46.60 E-value=59 Score=26.57 Aligned_cols=53 Identities=8% Similarity=-0.102 Sum_probs=33.6
Q ss_pred EEEeeCCChHHHHHHHH-HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACF-AAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~-a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.|+..++|..+..++.- ...++-.-.|+++...-..-...++..|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 37777777777776632 222222223455554456667778889999999875
No 448
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=46.35 E-value=74 Score=23.70 Aligned_cols=50 Identities=8% Similarity=-0.015 Sum_probs=33.6
Q ss_pred CeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEe
Q 043209 70 KTVLIECTSGNTGIGMACFAA-AKGYKLILVMPAFMSLE-KRIILQAYGAQLILT 122 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~-~~g~~~~ivvp~~~~~~-~~~~l~~~Ga~V~~v 122 (221)
++.+|+..+|..|.+++.... ..|.+++++... .. +.+.+...+.++..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ---LKTRIPPEIIDHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS---HHHHSCHHHHTSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC---ccccchhhccCCCceEEE
Confidence 345888889999999999988 899988877643 33 444442234444443
No 449
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=46.17 E-value=68 Score=27.56 Aligned_cols=51 Identities=27% Similarity=0.271 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHH-cCCC-CCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 043209 51 RIAFSMIKDAEE-KGLI-TPGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPA 102 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~-~~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~ 102 (221)
|++.+.+..+.+ .|.- -.|+ +|...+.||-|..+|..++. +|++++.+.+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~gk-tvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKGK-TIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTTC-EEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCCC-EEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 577767666554 4532 2354 48888999999999999999 99998877643
No 450
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=46.16 E-value=69 Score=24.93 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=40.4
Q ss_pred CeEEEeeC--CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEE--EeCCCCChhHHHHHHHHHHhh
Q 043209 70 KTVLIECT--SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLI--LTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~as--sGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~--~v~~~~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.+ +|.-|.+++......|.+++++.... ...++ ..+.++.++. .++-. +.++..+...+..++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR--LRLIQRITDRLPAKAPLLELDVQ-NEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC--HHHHHHHHTTSSSCCCEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh--HHHHHHHHHhcCCCceEEEccCC-CHHHHHHHHHHHHHH
Confidence 56677776 78899999999888999866654332 22122 2234454443 34433 344445555555444
No 451
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=46.06 E-value=88 Score=24.06 Aligned_cols=74 Identities=15% Similarity=0.088 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCc
Q 043209 106 LEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~ 185 (221)
....+.+...|++|+.++.+ ....+..+++.++.+...++ +. |....+ ....+..++.+++ +.+|.+|..+|.
T Consensus 30 ~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~-~~-Dv~~~~-~v~~~~~~~~~~~-g~id~lv~nAg~ 102 (271)
T 3ek2_A 30 YGIAKACKREGAELAFTYVG---DRFKDRITEFAAEFGSELVF-PC-DVADDA-QIDALFASLKTHW-DSLDGLVHSIGF 102 (271)
T ss_dssp HHHHHHHHHTTCEEEEEESS---GGGHHHHHHHHHHTTCCCEE-EC-CTTCHH-HHHHHHHHHHHHC-SCEEEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEecc---hhhHHHHHHHHHHcCCcEEE-EC-CCCCHH-HHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 34567778899999998765 22334455555555332222 22 222333 4556777888887 679999999986
Q ss_pred h
Q 043209 186 G 186 (221)
Q Consensus 186 G 186 (221)
.
T Consensus 103 ~ 103 (271)
T 3ek2_A 103 A 103 (271)
T ss_dssp C
T ss_pred C
Confidence 4
No 452
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.99 E-value=44 Score=26.15 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
+..+|+..+|..|.+++......|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 56688888899999999998889998777653
No 453
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=45.99 E-value=77 Score=26.16 Aligned_cols=81 Identities=14% Similarity=-0.043 Sum_probs=43.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC--ChhHHHHHHHHHHhhCCCeeecCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM--GIDEEFRIVEELLNKIPTSFNPHQ 150 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~--~~~~~~~~a~~~~~~~~~~~~~~~ 150 (221)
|+..++|..+..++..+- .+-.-.|+++...-......++..|++++.++.+. ++.-..+..++..++....+++..
T Consensus 102 v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~ 180 (412)
T 2x5d_A 102 AIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGF 180 (412)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEES
T ss_pred EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECC
Confidence 677777777766665543 22212444444444556667788999999886542 232122233333223345666643
Q ss_pred CCCC
Q 043209 151 FKNP 154 (221)
Q Consensus 151 ~~n~ 154 (221)
..||
T Consensus 181 p~np 184 (412)
T 2x5d_A 181 PSNP 184 (412)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 3454
No 454
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=45.90 E-value=21 Score=25.48 Aligned_cols=47 Identities=15% Similarity=0.178 Sum_probs=32.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLIL 121 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~ 121 (221)
.|+..+.|..|..++...+..|.+++++-+. ..+.+.++ ..|..++.
T Consensus 21 ~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~ 68 (155)
T 2g1u_A 21 YIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVV 68 (155)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEE
T ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEE
Confidence 3666678999999999999999987777543 23333444 45666544
No 455
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=45.75 E-value=30 Score=28.53 Aligned_cols=109 Identities=12% Similarity=0.050 Sum_probs=60.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C----------------CHHHHHHHHHcCCEEEEeCCCCChhHHHHH
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAF-M----------------SLEKRIILQAYGAQLILTNAEMGIDEEFRI 134 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~----------------~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~ 134 (221)
+|+.-++|-.|..++.+|+++|++++++-+.. . ....+. ....+.+++..... .......
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~--~~~~~~~ 79 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLL-ELSKRVDAVLPVNE--NLACIEF 79 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHH-HHHTSSSEEEECCC--CHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHH-HHhcCCCEEEECCC--ChhHHHH
Confidence 36777889999999999999999998885431 1 111111 12345666655443 2334445
Q ss_pred HHHHHhhCCCeeecCCCCCCccH-HHHHhhHHHHHHHhhCC--------CCCEEEEccCchh
Q 043209 135 VEELLNKIPTSFNPHQFKNPANP-KTHYETTGPEIWEGTRG--------QVDIFVSGIGTGG 187 (221)
Q Consensus 135 a~~~~~~~~~~~~~~~~~n~~~~-~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg 187 (221)
+.+++++. +..+. + ++... ..+-+....+++++.+- .+-.|+=|..++|
T Consensus 80 ~~~~~~~~-~~~~g-~--~~~a~~~~~dK~~~k~~l~~~gip~~~~~~ig~P~vvKp~~g~g 137 (363)
T 4ffl_A 80 LNSIKEKF-SCPVL-F--DFEAYRISRDKKKSKDYFKSIGVPTPQDRPSKPPYFVKPPCESS 137 (363)
T ss_dssp HHHHGGGC-SSCBC-C--CHHHHHHHTSHHHHHHHHHHTTCCCCCBSCSSSCEEEECSSCCT
T ss_pred HHHHHHHC-CCccC-C--CHHHHHHhhCHHHHHHHHHhcCCCCCCceecCCCEEEEECCCCC
Confidence 55555554 33221 1 22211 12445666777777631 1335666665544
No 456
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=45.75 E-value=90 Score=23.18 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=38.6
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHH-HHHHHHHHcCCeEEEEecCC--CCHH----HHHHHHHcCCEEE
Q 043209 58 KDAEEKGLITPGKTVLIECTSGNTGI-GMACFAAAKGYKLILVMPAF--MSLE----KRIILQAYGAQLI 120 (221)
Q Consensus 58 ~~a~~~g~~~~g~~~vv~assGN~~~-alA~~a~~~g~~~~ivvp~~--~~~~----~~~~l~~~Ga~V~ 120 (221)
..++++|. .+.+|+.-..+.+. +.|.-|..+|++++++.... .+.. -++.|+..|++++
T Consensus 118 ~~L~~~gi----~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 118 NWLRQRGV----DEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCC----CEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 33355664 55566666666665 45556788899999887542 2332 4677889999875
No 457
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=45.40 E-value=1.2e+02 Score=24.31 Aligned_cols=45 Identities=7% Similarity=0.021 Sum_probs=33.0
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
..+++++- ++||+||| .+...+.|+..++++.+ .++.|+|.+...
T Consensus 230 ~~~ll~~~-~~~~ai~~--~nD~~A~g~~~al~~~G~~vP~disvvgfD~~~ 278 (339)
T 3h5o_A 230 LDRALAER-PDCDALFC--CNDDLAIGALARSQQLGIAVPERLAIAGFNDLQ 278 (339)
T ss_dssp HHHHHHHC-TTCCEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEECSBCCG
T ss_pred HHHHHcCC-CCCcEEEE--CChHHHHHHHHHHHHcCCCCCCCEEEEEECCHH
Confidence 33444442 57999997 45678899999999987 368999987543
No 458
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=45.36 E-value=60 Score=22.62 Aligned_cols=47 Identities=13% Similarity=0.223 Sum_probs=30.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEE
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLI 120 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~ 120 (221)
++ +..-++|+.|.+++......|.+ +.+... +..+.+. .+.+|.++.
T Consensus 22 ~~-v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r--~~~~~~~~a~~~~~~~~ 69 (144)
T 3oj0_A 22 NK-ILLVGNGMLASEIAPYFSYPQYK-VTVAGR--NIDHVRAFAEKYEYEYV 69 (144)
T ss_dssp CE-EEEECCSHHHHHHGGGCCTTTCE-EEEEES--CHHHHHHHHHHHTCEEE
T ss_pred CE-EEEECCCHHHHHHHHHHHhCCCE-EEEEcC--CHHHHHHHHHHhCCceE
Confidence 44 66667899999999888878988 444433 3444333 445665544
No 459
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.34 E-value=68 Score=21.66 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=33.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEeC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLILTN 123 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~v~ 123 (221)
++..+.|+.|..++......|.+++++-+ +..+.+.++ .+|..++..+
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~~d 55 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVINGD 55 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEEESC
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEEEcC
Confidence 55557799999999998888988776643 344555554 3577655443
No 460
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=45.25 E-value=1e+02 Score=23.75 Aligned_cols=147 Identities=12% Similarity=0.077 Sum_probs=75.2
Q ss_pred HHHHHHHcCCCCCCCeEEEeeCCC-hHHHHHHHHHHHcCCeEEEEec---CC--C-----CHH-----HHHHHHHc-C--
Q 043209 56 MIKDAEEKGLITPGKTVLIECTSG-NTGIGMACFAAAKGYKLILVMP---AF--M-----SLE-----KRIILQAY-G-- 116 (221)
Q Consensus 56 ~~~~a~~~g~~~~g~~~vv~assG-N~~~alA~~a~~~g~~~~ivvp---~~--~-----~~~-----~~~~l~~~-G-- 116 (221)
.+..+.+++. ..++..+.. +........++..|++++.+-. .. . ... -.+.|... |
T Consensus 49 ~i~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~gg~ 123 (283)
T 2ioy_A 49 NVEDLIQQKV-----DVLLINPVDSDAVVTAIKEANSKNIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGK 123 (283)
T ss_dssp HHHHHHHTTC-----SEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHcCC-----CEEEEeCCchhhhHHHHHHHHHCCCeEEEecCCCCCcceeEEEecChHHHHHHHHHHHHHHcCCC
Confidence 3455555553 335554432 2212223345667999877632 11 1 111 12333333 5
Q ss_pred CEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHH
Q 043209 117 AQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193 (221)
Q Consensus 117 a~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~ 193 (221)
.+|..+.+..+.. ++.+-.++..++.++.-+.......+..+.++ ....+++++- +++|+|||. +-.++.|+.
T Consensus 124 ~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~-~~~~ai~~~--nD~~A~g~~ 199 (283)
T 2ioy_A 124 GNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQAADFDRSKGL-SVMENILQAQ-PKIDAVFAQ--NDEMALGAI 199 (283)
T ss_dssp EEEEEEECCTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECTTCHHHHH-HHHHHHHHHC-SCCCEEEES--SHHHHHHHH
T ss_pred ceEEEEECCCCCccHHHHHHHHHHHHHhCCCCEEEeeccCCCCHHHHH-HHHHHHHHhC-CCccEEEEC--CchHHHHHH
Confidence 4666664432222 33333344455543432221111122344343 3455666653 578999875 456788999
Q ss_pred HHHHhcCC-CcEEEEEeCC
Q 043209 194 NFLKKKNP-EIKVYGVEPA 211 (221)
Q Consensus 194 ~~~~~~~~-~~kvigVe~~ 211 (221)
.++++.+- ++.|+|.+..
T Consensus 200 ~al~~~G~~di~viG~D~~ 218 (283)
T 2ioy_A 200 KAIEAANRQGIIVVGFDGT 218 (283)
T ss_dssp HHHHHTTCCCCEEEEEECC
T ss_pred HHHHHCCCCCcEEEEeCCC
Confidence 99998774 8999999853
No 461
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.20 E-value=1.1e+02 Score=23.85 Aligned_cols=69 Identities=20% Similarity=0.154 Sum_probs=41.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLILTNAE-MGIDEEFRIVEELLNK 141 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~ 141 (221)
++.+|+.++|-.|.+++......|.+++++... ..+.+. .+.++.++..+..+ .+.++..+..++..++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999987766533 333333 23344445444322 1334444444444443
No 462
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=45.16 E-value=1e+02 Score=23.62 Aligned_cols=52 Identities=10% Similarity=0.127 Sum_probs=37.0
Q ss_pred cHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCC
Q 043209 156 NPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPA 211 (221)
Q Consensus 156 ~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~ 211 (221)
..+.++ ....+++++- ++||+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 165 ~~~~~~-~~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~g~~dv~vvGfD~~ 217 (271)
T 2dri_A 165 DRIKGL-NVMQNLLTAH-PDVQAVFAQ--NDEMALGALRALQTAGKSDVMVVGFDGT 217 (271)
T ss_dssp CHHHHH-HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCSCEEEEEECC
T ss_pred CHHHHH-HHHHHHHHhC-CCccEEEEC--CCcHHHHHHHHHHHcCCCCcEEEEecCC
Confidence 344343 3445666553 579999976 5667889999999887 48999999854
No 463
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=45.10 E-value=1.1e+02 Score=24.01 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=34.2
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-C-CcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-P-EIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~-~~kvigVe~~ 211 (221)
....+++++- +++|+||+.. ...+.|+..++++.+ | ++.|+|.+..
T Consensus 171 ~~~~~~l~~~-~~~~ai~~~~--d~~a~g~~~al~~~G~p~dv~vvg~d~~ 218 (313)
T 2h3h_A 171 SLAEAALNAH-PDLDAFFGVY--AYNGPAQALVVKNAGKVGKVKIVCFDTT 218 (313)
T ss_dssp HHHHHHHHHC-TTCCEEEECS--TTHHHHHHHHHHHTTCTTTSEEEEECCC
T ss_pred HHHHHHHHHC-cCceEEEEcC--CCccHHHHHHHHHcCCCCCeEEEEeCCC
Confidence 4556666654 5789999864 456779999999886 3 6899999754
No 464
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=45.08 E-value=1e+02 Score=23.98 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK 141 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~ 141 (221)
+++.+|+.++|--|.++|......|.+++++....... .-.++.+.++-. +.++..+...+..++
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------VNVSDHFKIDVT-NEEEVKEAVEKTTKK 78 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------TTSSEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------cCceeEEEecCC-CHHHHHHHHHHHHHH
Confidence 46778888889999999999888999877765432111 013444555543 344555555555444
No 465
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=44.96 E-value=60 Score=28.02 Aligned_cols=50 Identities=26% Similarity=0.238 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 51 RIAFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|+..+.+..+.+ .|.--.| .+|+..+.||-|..+|.....+|.+++.+..
T Consensus 202 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqG~GnVG~~aa~~l~e~GakVVavsD 252 (424)
T 3k92_A 202 QGVTICIEEAVKKKGIKLQN-ARIIIQGFGNAGSFLAKFMHDAGAKVIGISD 252 (424)
T ss_dssp HHHHHHHHHHHHHTTCCGGG-CEEEEECCSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCccc-CEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 366666666544 3432223 4588888999999999999999998876654
No 466
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=44.96 E-value=1.1e+02 Score=23.75 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=33.4
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCC
Q 043209 163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPA 211 (221)
Q Consensus 163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~ 211 (221)
....+++++- +++|+|||.... +.|+..++++.+ .++.|+|.+-.
T Consensus 189 ~~~~~~l~~~-~~~~ai~~~~d~---a~g~~~al~~~g~~di~vig~d~~ 234 (304)
T 3gbv_A 189 RMLDDFFREH-PDVKHGITFNSK---VYIIGEYLQQRRKSDFSLIGYDLL 234 (304)
T ss_dssp HHHHHHHHHC-TTCCEEEESSSC---THHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHHHHHhC-CCeEEEEEcCcc---hHHHHHHHHHcCCCCcEEEEeCCC
Confidence 3445566553 579999987754 568999999988 48999998754
No 467
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=44.94 E-value=84 Score=24.12 Aligned_cols=43 Identities=14% Similarity=-0.007 Sum_probs=32.5
Q ss_pred hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeC
Q 043209 162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEP 210 (221)
Q Consensus 162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~ 210 (221)
-.++.|-.+++ .+++||++..+|-|+.-.+..+ .+++||.|.=
T Consensus 32 l~la~era~e~--~Ik~iVVAS~sG~TA~k~~e~~----~~i~lVvVTh 74 (201)
T 1vp8_A 32 LRLAVERAKEL--GIKHLVVASSYGDTAMKALEMA----EGLEVVVVTY 74 (201)
T ss_dssp HHHHHHHHHHH--TCCEEEEECSSSHHHHHHHHHC----TTCEEEEEEC
T ss_pred HHHHHHHHHHc--CCCEEEEEeCCChHHHHHHHHh----cCCeEEEEeC
Confidence 45666777776 4899999999999986655544 5589999873
No 468
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=44.93 E-value=50 Score=26.99 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=41.3
Q ss_pred EEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHH--HHHHHHHcCCEEEEeCCCCCh-hHHHHHHHHHHhhCCCeee
Q 043209 72 VLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLE--KRIILQAYGAQLILTNAEMGI-DEEFRIVEELLNKIPTSFN 147 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~--~~~~l~~~Ga~V~~v~~~~~~-~~~~~~a~~~~~~~~~~~~ 147 (221)
.++..++|..+..++..+-.. |- .|+++...-.. -...++..|++++.++.+.++ .+.....+.+.+.....++
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd--~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~ 164 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGD--VVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILA 164 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEE
T ss_pred EEEEeCchHHHHHHHHHhccCCCC--EEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEE
Confidence 377777777776666655422 33 33443322222 456678899999988753221 1122222222221335666
Q ss_pred cCCCCCC
Q 043209 148 PHQFKNP 154 (221)
Q Consensus 148 ~~~~~n~ 154 (221)
+....||
T Consensus 165 ~~~~~np 171 (393)
T 1vjo_A 165 LVHAETS 171 (393)
T ss_dssp EESEETT
T ss_pred EeccCCC
Confidence 6544444
No 469
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=44.92 E-value=71 Score=26.11 Aligned_cols=81 Identities=12% Similarity=0.040 Sum_probs=40.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCCCChh-HHHHHHHHHHhhCCCeeecC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL--EKRIILQAYGAQLILTNAEMGID-EEFRIVEELLNKIPTSFNPH 149 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~--~~~~~l~~~Ga~V~~v~~~~~~~-~~~~~a~~~~~~~~~~~~~~ 149 (221)
++..++|..+..++..+- +.-.-.|+++...-. .-...++..|++++.++.+.++. +..+..+.+.+.....+++.
T Consensus 67 v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 145 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTV 145 (411)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred EEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEe
Confidence 566666666666555544 322223333332222 24566788999999887542222 22222233333244666665
Q ss_pred CCCCC
Q 043209 150 QFKNP 154 (221)
Q Consensus 150 ~~~n~ 154 (221)
...|+
T Consensus 146 ~~~np 150 (411)
T 3nnk_A 146 QGDTS 150 (411)
T ss_dssp SEETT
T ss_pred CCCCC
Confidence 43443
No 470
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=44.92 E-value=70 Score=25.44 Aligned_cols=44 Identities=25% Similarity=0.135 Sum_probs=33.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ 118 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~ 118 (221)
+|..-+.|+.|.++|......|.+++++- .+..+.+.+...|..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d---~~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFD---LVQSAVDGLVAAGAS 48 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCE
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCCe
Confidence 36667899999999999999999877773 345666666655543
No 471
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=44.90 E-value=73 Score=26.26 Aligned_cols=83 Identities=8% Similarity=-0.017 Sum_probs=42.6
Q ss_pred EEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCCHHHHH---HHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCee
Q 043209 73 LIECTSGNTGIGMACFAAA---KGYKLILVMPAFMSLEKRI---ILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSF 146 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~---~g~~~~ivvp~~~~~~~~~---~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~ 146 (221)
|+..++|..+..++..+-. .+-.-.|+++...-..... .++..|++++.++.+.++.-..+..++..++....+
T Consensus 88 v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v 167 (423)
T 3lvm_A 88 IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILV 167 (423)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEE
T ss_pred EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEE
Confidence 6767777777666655433 1212345555544444333 336679999998754222211222233333333456
Q ss_pred ecCCCCCCc
Q 043209 147 NPHQFKNPA 155 (221)
Q Consensus 147 ~~~~~~n~~ 155 (221)
++....||.
T Consensus 168 ~~~~~~npt 176 (423)
T 3lvm_A 168 SIMHVNNEI 176 (423)
T ss_dssp ECCSBCTTT
T ss_pred EEeCCCCCC
Confidence 665545543
No 472
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=44.86 E-value=1.3e+02 Score=24.71 Aligned_cols=54 Identities=19% Similarity=0.113 Sum_probs=34.9
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC----------------CH-HHHHHHHHcCCEEEEeCCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFM----------------SL-EKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~----------------~~-~~~~~l~~~Ga~V~~v~~~ 125 (221)
+|+..++|..++.++.+++.+|++++++-+... .. ..++.++..+.+++....+
T Consensus 13 ~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e 83 (391)
T 1kjq_A 13 RVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIE 83 (391)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECCC
Confidence 466667788888888888889988777654311 11 2234455567777766543
No 473
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=44.76 E-value=50 Score=27.13 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=32.7
Q ss_pred EEeeCCChHHHHHHHHHHH------cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 73 LIECTSGNTGIGMACFAAA------KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~------~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
.+..++|..+..++..+.. .+-.-.|+++...-......++..|++++.++.+
T Consensus 52 ~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~ 110 (390)
T 3b8x_A 52 AVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDID 110 (390)
T ss_dssp EEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC
T ss_pred EEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 5666666655554444331 2112356666665667777788899999888754
No 474
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=44.52 E-value=1e+02 Score=23.53 Aligned_cols=37 Identities=14% Similarity=0.212 Sum_probs=29.5
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
+++|+|||. +...+.|+..++++.+ .++.|+|.+...
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~~~ 216 (277)
T 3e61_A 176 LSIDSIICS--NDLLAINVLGIVQRYHFKVPAEIQIIGYDNIP 216 (277)
T ss_dssp HTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSBCCG
T ss_pred CCCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeCCch
Confidence 468999976 5678889999999987 368899987543
No 475
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=44.50 E-value=21 Score=28.31 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=25.4
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
|+.-++|..|.+.|..++++|+++++|=
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 7888999999999999999999988873
No 476
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=44.46 E-value=26 Score=26.85 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=27.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
|+.-++|..|.++|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 888999999999999999999999988754
No 477
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=44.36 E-value=86 Score=26.95 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=37.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC-----CHHHHHHHHHcCCEEEE
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYK-LILVMPAFM-----SLEKRIILQAYGAQLIL 121 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~-~~ivvp~~~-----~~~~~~~l~~~Ga~V~~ 121 (221)
+++ |+.-++||+|.-+|..+.++|.+ ++++..... ....++.++..|.+++.
T Consensus 264 gk~-VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 264 GKH-VVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp CSE-EEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEEC
T ss_pred CCE-EEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEe
Confidence 444 78889999999999999999985 777764421 23345567777877664
No 478
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=44.36 E-value=1.2e+02 Score=24.25 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=32.2
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209 165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA 211 (221)
Q Consensus 165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~ 211 (221)
..+++++- ++||+|||. +..++.|+..++++.+ .++.|+|.+..
T Consensus 238 ~~~ll~~~-~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~disvvg~D~~ 285 (344)
T 3kjx_A 238 TQAMLERS-PDLDFLYYS--NDMIAAGGLLYLLEQGIDIPGQIGLAGFNNV 285 (344)
T ss_dssp HHHHHHHS-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSBCC
T ss_pred HHHHHhcC-CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEECCh
Confidence 34444443 579999954 5678899999999987 36889998754
No 479
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=44.34 E-value=25 Score=28.02 Aligned_cols=28 Identities=18% Similarity=0.372 Sum_probs=25.5
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
|+.-++|..|.+.|..++++|+++++|=
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~liE 36 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMIE 36 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 7888999999999999999999998883
No 480
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=44.17 E-value=58 Score=26.45 Aligned_cols=51 Identities=6% Similarity=-0.041 Sum_probs=35.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
|+..++|..+..++..+- .+-.-.|+++...-......++..|++++.++.
T Consensus 88 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 88 CVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNMFYSVIEGNGRRVISSDL 138 (391)
T ss_dssp EEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred EEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHHHHHHHHHcCCEEEEeee
Confidence 777777777776666554 222235666665566677788899999998875
No 481
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=44.07 E-value=1.5e+02 Score=25.07 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=23.3
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhc-----------------CCCcEEEEEeCCC
Q 043209 166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKK-----------------NPEIKVYGVEPAE 212 (221)
Q Consensus 166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~-----------------~~~~kvigVe~~~ 212 (221)
.+.+.+. ++|. |+++|+|+. .=++++.... .+.+++|.|-+..
T Consensus 94 ~~~~~~~--~~D~-IIavGGGsv-iD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 94 VEVAKKE--KVEA-VLGVGGGSV-VDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHHHHHT--TCSE-EEEEESHHH-HHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHHHHhc--CCCE-EEEeCChhH-HHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 3444443 4664 558887764 2333333322 1567888887664
No 482
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=44.06 E-value=1.1e+02 Score=26.82 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=35.8
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 043209 63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL 119 (221)
Q Consensus 63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V 119 (221)
.+....|++ ++..+.|+-|+++|..++.+|.+++++-+ .+.+..+....|.++
T Consensus 241 tg~~L~GKT-VgVIG~G~IGr~vA~~lrafGa~Viv~d~---dp~~a~~A~~~G~~v 293 (464)
T 3n58_A 241 TDVMMAGKV-AVVCGYGDVGKGSAQSLAGAGARVKVTEV---DPICALQAAMDGFEV 293 (464)
T ss_dssp HCCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCEE
T ss_pred cCCcccCCE-EEEECcCHHHHHHHHHHHHCCCEEEEEeC---CcchhhHHHhcCcee
Confidence 344555655 88889999999999999999998665532 233333334456554
No 483
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=43.96 E-value=71 Score=27.11 Aligned_cols=28 Identities=7% Similarity=0.214 Sum_probs=20.4
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
|+..++|..+..++.+++.+|++++++.
T Consensus 4 ilI~g~g~~~~~i~~a~~~~G~~vv~v~ 31 (451)
T 2vpq_A 4 VLIANRGEIAVRIIRACRDLGIQTVAIY 31 (451)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 5566677777777777777888777665
No 484
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.93 E-value=1.2e+02 Score=24.10 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=28.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
++.+|+.++|.-|.+++......|.+++++...
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 567888899999999999998899998887643
No 485
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=43.92 E-value=51 Score=28.20 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHH----HHHcCCEEEEeC
Q 043209 80 NTGIGMACFAAAKGYKLILVMPAF--MSLEKRII----LQAYGAQLILTN 123 (221)
Q Consensus 80 N~~~alA~~a~~~g~~~~ivvp~~--~~~~~~~~----l~~~Ga~V~~v~ 123 (221)
|.++|+..++.++|++++++.|+. ..+..+.. .+..|+.+..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 788999999999999999999985 34444433 345677776554
No 486
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=43.85 E-value=65 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.019 Sum_probs=35.6
Q ss_pred EEeeCCChHHHHHHHHHHH---------cCC---eEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209 73 LIECTSGNTGIGMACFAAA---------KGY---KLILVMPAFMSLEKRIILQAYGAQLILTNAE 125 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~---------~g~---~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~ 125 (221)
++..++|..+..++..+.. -|+ +-.|++|. .-..-.+.++.+|++++.++.+
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 5666666666666654432 353 24677788 7777777888999999998754
No 487
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=43.78 E-value=83 Score=24.84 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=42.1
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE-EEEeCCCCChhHHHHHHHHHHhhC
Q 043209 69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ-LILTNAEMGIDEEFRIVEELLNKI 142 (221)
Q Consensus 69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~-V~~v~~~~~~~~~~~~a~~~~~~~ 142 (221)
|+..+|+.+++--|+++|......|.++++.-..... ..... .+.++-. +.++..+..++..++.
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--------GLPEELFVEADLT-TKEGCAIVAEATRQRL 76 (261)
T ss_dssp TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--------TSCTTTEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--------CCCcEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 4777888888999999999999999988776543221 11111 2334433 3556666666666665
No 488
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=43.72 E-value=26 Score=27.93 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=25.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVM 100 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivv 100 (221)
.|+.-++|..|.+.|..+++.|+++++|=
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 37888999999999999999999998883
No 489
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=43.63 E-value=68 Score=25.69 Aligned_cols=45 Identities=20% Similarity=0.025 Sum_probs=35.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL 119 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V 119 (221)
+|..-+.|+.|.++|......|.+++++ +.+..+.+.+...|+..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGA---DLNPQACANLLAEGACG 53 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHHHHcCCcc
Confidence 3666789999999999999999987777 34567777777777654
No 490
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=43.52 E-value=15 Score=31.90 Aligned_cols=37 Identities=27% Similarity=0.492 Sum_probs=25.3
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209 174 GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES 213 (221)
Q Consensus 174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s 213 (221)
+++|+|||..|++|...+ .=|.+ .+..+|..+|.-..
T Consensus 16 ~~yD~IIVGsG~aG~v~A--~rLse-~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLA--ARLSE-DPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHH--HHHTT-STTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHH--HHHHh-CCCCeEEEEcCCCC
Confidence 578999999998776433 11222 47789999997653
No 491
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=43.01 E-value=78 Score=25.81 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCc
Q 043209 106 LEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185 (221)
Q Consensus 106 ~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~ 185 (221)
..-++.++.+|++|+.+..+ .+..+.++++-. ...++. .+ . ...++.+..+..+|.||-++|+
T Consensus 165 ~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa----~~vi~~-~~--~-------~~~~~~~~~~~g~Dvv~d~~g~ 227 (346)
T 3fbg_A 165 SIATQIAKAYGLRVITTASR---NETIEWTKKMGA----DIVLNH-KE--S-------LLNQFKTQGIELVDYVFCTFNT 227 (346)
T ss_dssp HHHHHHHHHTTCEEEEECCS---HHHHHHHHHHTC----SEEECT-TS--C-------HHHHHHHHTCCCEEEEEESSCH
T ss_pred HHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCC----cEEEEC-Cc--c-------HHHHHHHhCCCCccEEEECCCc
Confidence 34567788999999998774 355555555421 122322 11 1 1222322223469999999998
Q ss_pred hhHHHHHHHHHHhcCCCcEEEEE
Q 043209 186 GGTVSGVGNFLKKKNPEIKVYGV 208 (221)
Q Consensus 186 Gg~~~Gi~~~~~~~~~~~kvigV 208 (221)
..++.-....++. .=+++.+
T Consensus 228 ~~~~~~~~~~l~~---~G~iv~~ 247 (346)
T 3fbg_A 228 DMYYDDMIQLVKP---RGHIATI 247 (346)
T ss_dssp HHHHHHHHHHEEE---EEEEEES
T ss_pred hHHHHHHHHHhcc---CCEEEEE
Confidence 6655444444443 3355443
No 492
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=42.96 E-value=1.3e+02 Score=24.81 Aligned_cols=47 Identities=17% Similarity=0.313 Sum_probs=33.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEEE
Q 043209 70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YGAQLI 120 (221)
Q Consensus 70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~Ga~V~ 120 (221)
++ |+..+.|..|.+++..++.+|.+++++-+ +..+++.++. +|+.+.
T Consensus 167 ~~-V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~~~~~~g~~~~ 214 (369)
T 2eez_A 167 AS-VVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQYLDDVFGGRVI 214 (369)
T ss_dssp CE-EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSEE
T ss_pred CE-EEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHhcCceEE
Confidence 44 55555699999999999999997665543 3456555544 787753
No 493
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=42.94 E-value=80 Score=23.81 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=33.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeC
Q 043209 71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGAQLILTN 123 (221)
Q Consensus 71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga~V~~v~ 123 (221)
+.+|+.++|.-|.+++......|.+++++.. +..+++. .+.++.++..+.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~ 53 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGR---SESKLSTVTNCLSNNVGYRA 53 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTCSSCCCEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHHhhccCeEe
Confidence 4588889999999999999999998666543 2344333 334455554443
No 494
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=42.93 E-value=76 Score=25.18 Aligned_cols=54 Identities=20% Similarity=0.264 Sum_probs=34.7
Q ss_pred CCCchhhHHHHHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 043209 44 PCSSVKDRIAFSMIKDAEEK-GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILV 99 (221)
Q Consensus 44 ptGs~K~R~a~~~~~~a~~~-g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~iv 99 (221)
+.|.+=|-...... +.+. +.--.+++.+|+.++|-.|++++......|.+++++
T Consensus 95 ~~G~nTd~~g~~~~--l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~ 149 (287)
T 1lu9_A 95 SNGSNTTAAAGVAL--VVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC 149 (287)
T ss_dssp STTHHHHHHHHHHH--HHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcCCchHHHHHHH--HHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence 67877766443322 2222 222234666777768999999999999999884444
No 495
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=42.92 E-value=30 Score=28.87 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=27.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPA 102 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~ 102 (221)
.|+..++|-.|.++|+..++.|++++|+=..
T Consensus 25 dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 25 KAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4889999999999999999999998888644
No 496
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=42.71 E-value=50 Score=22.47 Aligned_cols=48 Identities=17% Similarity=0.143 Sum_probs=33.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209 73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123 (221)
Q Consensus 73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~ 123 (221)
++..+.|..|..++......|.+++++-. +..+.+.++..|..++..+
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~d 56 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHAVIAN 56 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEEEEeC
Confidence 45555699999999999999988776643 3455555555676655433
No 497
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=42.69 E-value=1.3e+02 Score=24.14 Aligned_cols=148 Identities=11% Similarity=0.068 Sum_probs=75.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------------CCCH-----HHHHH
Q 043209 54 FSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-----------------FMSL-----EKRII 111 (221)
Q Consensus 54 ~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-----------------~~~~-----~~~~~ 111 (221)
...+.++.++.. -..|+...++....+++-.+...+++.+..... ..+. .-.+.
T Consensus 78 ~~~~~~l~~~~~----v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (386)
T 3sg0_A 78 AQNARKLLSEEK----VDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKY 153 (386)
T ss_dssp HHHHHHHHHTSC----CSEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcC----ceEEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHH
Confidence 334455555521 233665555666677788888899998765320 0111 12345
Q ss_pred HHHcCC-EEEEeCCCCCh-hHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHH
Q 043209 112 LQAYGA-QLILTNAEMGI-DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV 189 (221)
Q Consensus 112 l~~~Ga-~V~~v~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~ 189 (221)
+..+|. +|..+..+..+ .+..+..++..++.+..+......+.... -+.....+|.+ .++|.||++ +.+..+
T Consensus 154 l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~--d~~~~~~~~~~---~~~dav~~~-~~~~~a 227 (386)
T 3sg0_A 154 IAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSDA--SVTGQVLKIIA---TKPDAVFIA-SAGTPA 227 (386)
T ss_dssp HHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHHTCEECCCEEECTTCS--CCHHHHHHHHH---TCCSEEEEE-CCSGGG
T ss_pred HHhcCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEEeeCCCCC--cHHHHHHHHHh---cCCCEEEEe-cCcchH
Confidence 566775 44444333122 23333444444444222210110000000 11122223333 368998875 456678
Q ss_pred HHHHHHHHhcCCCcEEEEEeCC
Q 043209 190 SGVGNFLKKKNPEIKVYGVEPA 211 (221)
Q Consensus 190 ~Gi~~~~~~~~~~~kvigVe~~ 211 (221)
.++.+.+++.+-.+++++....
T Consensus 228 ~~~~~~~~~~g~~~~~~~~~~~ 249 (386)
T 3sg0_A 228 VLPQKALRERGFKGAIYQTHGV 249 (386)
T ss_dssp HHHHHHHHHTTCCSEEECCGGG
T ss_pred HHHHHHHHHcCCCCcEEecccc
Confidence 8999999998877888776543
No 498
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=42.47 E-value=1.1e+02 Score=23.19 Aligned_cols=48 Identities=8% Similarity=0.173 Sum_probs=32.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209 72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124 (221)
Q Consensus 72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~ 124 (221)
.++..+.|..|..++......|. ++ ++.. +..+.+.++ .|.+++.-+.
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~-vid~--~~~~~~~~~-~~~~~i~gd~ 58 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FV-LAED--ENVRKKVLR-SGANFVHGDP 58 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EE-EESC--GGGHHHHHH-TTCEEEESCT
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EE-EEEC--CHHHHHHHh-cCCeEEEcCC
Confidence 37777889999999988777777 44 4433 344555556 7777765544
No 499
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=42.28 E-value=85 Score=27.28 Aligned_cols=50 Identities=18% Similarity=0.082 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209 51 RIAFSMIKDAEE-KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMP 101 (221)
Q Consensus 51 R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp 101 (221)
|++.+.+..+.+ .|.--.|+ +|+..+.||-|..++.....+|.+++.+..
T Consensus 211 ~Gv~~~~~~~~~~~G~~l~g~-~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHENDTLVGK-TVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTTCCSTTC-EEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHccCCcCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 677777776654 45222344 488888999999999988889999887654
No 500
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=42.12 E-value=56 Score=25.38 Aligned_cols=44 Identities=9% Similarity=0.129 Sum_probs=32.8
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209 164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE 212 (221)
Q Consensus 164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~ 212 (221)
...+++++ ++|+|||. +...+.|+..++++.+ .++.|+|++...
T Consensus 179 ~~~~~l~~---~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 226 (288)
T 2qu7_A 179 ATKTLLSK---GIKGIVAT--NHLLLLGALQAIKESEKEIKKDVIIVGFDDSY 226 (288)
T ss_dssp HHHHHHHT---TCCEEEEC--SHHHHHHHHHHHHHSSCCBTTTBEEEEESCCT
T ss_pred HHHHHHhc---CCCEEEEC--CcHHHHHHHHHHHHhCCCCCCceEEEEeCChH
Confidence 44555554 68999975 5667889999999876 368899997653
Done!