Query 043219
Match_columns 591
No_of_seqs 287 out of 1657
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 02:41:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043219.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043219hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02340 endoglucanase 100.0 2E-145 3E-150 1199.1 54.6 591 1-591 3-614 (614)
2 PLN02171 endoglucanase 100.0 5E-144 1E-148 1189.9 57.6 574 15-591 20-627 (629)
3 PLN02420 endoglucanase 100.0 1E-125 3E-130 1024.7 48.9 477 17-493 33-511 (525)
4 PLN00119 endoglucanase 100.0 2E-125 5E-130 1015.2 47.5 479 3-489 11-489 (489)
5 PLN02613 endoglucanase 100.0 1E-122 2E-127 998.5 47.2 478 4-494 5-484 (498)
6 PLN02266 endoglucanase 100.0 6E-123 1E-127 1001.0 45.5 465 20-492 41-507 (510)
7 PLN02175 endoglucanase 100.0 2E-122 5E-127 989.2 46.7 479 1-492 1-482 (484)
8 PLN02909 Endoglucanase 100.0 2E-122 5E-127 991.3 46.5 457 19-490 28-485 (486)
9 PLN02308 endoglucanase 100.0 5E-122 1E-126 993.0 47.8 475 8-490 11-487 (492)
10 PLN03009 cellulase 100.0 2E-121 3E-126 994.2 48.2 486 1-493 4-493 (495)
11 PLN02345 endoglucanase 100.0 2E-120 5E-125 975.0 46.5 457 29-492 1-462 (469)
12 PF00759 Glyco_hydro_9: Glycos 100.0 8E-104 2E-108 862.2 33.7 435 25-486 1-444 (444)
13 PF09478 CBM49: Carbohydrate b 99.6 5.4E-16 1.2E-20 129.1 8.9 79 499-578 1-79 (80)
14 PF00553 CBM_2: Cellulose bind 99.6 1.6E-16 3.5E-21 138.3 5.9 79 499-581 1-85 (101)
15 smart00637 CBD_II CBD_II domai 99.4 2.1E-12 4.6E-17 110.5 8.7 72 506-581 1-79 (92)
16 COG5297 CelA Cellobiohydrolase 98.3 8.6E-07 1.9E-11 90.7 7.2 80 495-579 460-543 (544)
17 PF06483 ChiC: Chitinase C; I 97.7 0.00018 3.9E-09 67.5 9.0 92 495-588 32-153 (180)
18 cd00249 AGE AGE domain; N-acyl 97.2 0.014 3.1E-07 62.6 17.8 148 78-259 47-201 (384)
19 KOG2787 Lanthionine synthetase 94.5 0.53 1.1E-05 48.6 12.0 112 111-259 241-354 (403)
20 PF03663 Glyco_hydro_76: Glyco 94.4 0.63 1.4E-05 50.1 13.6 127 108-260 109-250 (370)
21 cd00249 AGE AGE domain; N-acyl 93.8 0.85 1.9E-05 48.8 13.2 118 117-259 16-143 (384)
22 COG1331 Highly conserved prote 93.8 0.26 5.6E-06 55.9 9.1 81 170-260 410-497 (667)
23 PF07944 DUF1680: Putative gly 92.8 1.2 2.6E-05 50.2 12.7 126 110-260 78-204 (520)
24 PF10633 NPCBM_assoc: NPCBM-as 92.1 0.41 8.8E-06 39.3 5.8 55 516-580 6-60 (78)
25 PF07221 GlcNAc_2-epim: N-acyl 90.7 1.1 2.4E-05 47.4 9.1 140 81-259 18-167 (346)
26 PF03173 CHB_HEX: Putative car 86.5 2.6 5.7E-05 39.9 7.4 79 507-589 26-120 (164)
27 PF03663 Glyco_hydro_76: Glyco 80.8 79 0.0017 33.9 16.9 31 231-261 85-123 (370)
28 COG2942 N-acyl-D-glucosamine 2 77.3 54 0.0012 35.3 13.7 125 110-260 73-203 (388)
29 PF09624 DUF2393: Protein of u 76.9 10 0.00022 35.1 7.4 73 517-590 64-147 (149)
30 TIGR03463 osq_cycl 2,3-oxidosq 71.8 1.4E+02 0.003 34.7 16.5 90 115-213 400-490 (634)
31 PF07470 Glyco_hydro_88: Glyco 70.6 1.4E+02 0.003 31.3 15.2 30 372-401 268-299 (336)
32 COG3533 Uncharacterized protei 67.5 39 0.00084 37.5 10.0 58 196-260 150-207 (589)
33 cd02892 SQCY_1 Squalene cyclas 65.0 1.7E+02 0.0037 33.9 15.5 160 24-214 325-490 (634)
34 PF07470 Glyco_hydro_88: Glyco 59.2 71 0.0015 33.5 10.4 80 108-212 208-287 (336)
35 PRK05461 apaG CO2+/MG2+ efflux 57.1 44 0.00096 30.3 7.1 18 513-530 27-44 (127)
36 PF07705 CARDB: CARDB; InterP 54.0 41 0.00088 27.9 6.2 52 516-580 20-71 (101)
37 cd04791 LanC_SerThrkinase Lant 52.1 2.8E+02 0.0061 28.4 16.9 25 235-259 143-167 (321)
38 COG1470 Predicted membrane pro 51.7 43 0.00093 36.8 7.0 53 517-579 399-451 (513)
39 TIGR01451 B_ant_repeat conserv 48.8 29 0.00064 26.2 3.9 26 516-541 13-38 (53)
40 PF07944 DUF1680: Putative gly 48.0 4.3E+02 0.0094 29.7 14.9 27 235-261 129-155 (520)
41 smart00809 Alpha_adaptinC2 Ada 45.4 1.9E+02 0.004 24.4 9.5 69 497-580 5-73 (104)
42 KOG1586 Protein required for f 44.2 33 0.00072 34.5 4.4 34 176-209 73-106 (288)
43 PF05753 TRAP_beta: Translocon 41.6 1.2E+02 0.0026 29.2 7.8 77 496-579 20-96 (181)
44 PF13249 Prenyltrans_2: Prenyl 39.2 37 0.0008 29.0 3.7 20 114-134 42-61 (113)
45 COG2967 ApaG Uncharacterized p 37.6 1.5E+02 0.0033 26.5 7.0 18 514-531 27-44 (126)
46 KOG4056 Translocase of outer m 37.0 59 0.0013 29.8 4.5 38 169-206 10-51 (143)
47 cd04794 euk_LANCL eukaryotic L 36.4 4.5E+02 0.0096 27.6 12.1 114 109-258 182-297 (343)
48 PF07221 GlcNAc_2-epim: N-acyl 35.9 97 0.0021 32.6 6.9 81 170-259 20-108 (346)
49 PF14796 AP3B1_C: Clathrin-ada 35.6 69 0.0015 29.7 4.9 68 496-574 66-134 (145)
50 COG4225 Predicted unsaturated 33.2 2E+02 0.0044 30.5 8.3 118 69-213 175-304 (357)
51 PF01345 DUF11: Domain of unkn 31.9 62 0.0013 25.9 3.6 27 515-541 41-67 (76)
52 PLN03012 Camelliol C synthase 29.2 8E+02 0.017 29.2 13.2 163 25-213 436-603 (759)
53 PLN02993 lupeol synthase 27.9 4.2E+02 0.009 31.6 10.7 165 25-213 436-603 (763)
54 PF06917 Pectate_lyase_2: Peri 27.2 60 0.0013 36.0 3.5 24 236-259 442-465 (557)
55 PF07233 DUF1425: Protein of u 27.0 1.8E+02 0.004 24.6 5.8 56 516-581 25-83 (94)
56 PF13598 DUF4139: Domain of un 27.0 1E+02 0.0022 32.0 5.2 84 495-579 216-314 (317)
57 TIGR01787 squalene_cyclas squa 26.6 2.7E+02 0.0058 32.3 8.9 25 112-136 457-481 (621)
58 cd04792 LanM-like LanM-like pr 26.5 1.1E+03 0.025 27.9 17.9 76 174-260 494-570 (825)
59 PF11906 DUF3426: Protein of u 25.8 2.4E+02 0.0053 25.7 6.9 66 513-581 66-137 (149)
60 cd02889 SQCY Squalene cyclase 25.6 3.9E+02 0.0084 27.8 9.4 158 24-213 42-204 (348)
61 TIGR02588 conserved hypothetic 23.0 5.6E+02 0.012 23.1 9.8 64 517-590 51-119 (122)
62 TIGR01507 hopene_cyclase squal 22.6 4.5E+02 0.0098 30.6 9.7 22 113-134 401-422 (635)
63 PF13243 Prenyltrans_1: Prenyl 22.1 19 0.0004 30.9 -1.3 22 112-133 43-64 (109)
64 cd02889 SQCY Squalene cyclase 21.8 3.9E+02 0.0085 27.8 8.5 24 112-135 188-211 (348)
65 PF04833 COBRA: COBRA-like pro 21.5 82 0.0018 30.0 2.8 35 517-551 1-42 (169)
66 COG4403 LcnDR2 Lantibiotic mod 20.2 4.4E+02 0.0096 31.6 8.7 83 170-259 738-821 (963)
No 1
>PLN02340 endoglucanase
Probab=100.00 E-value=1.5e-145 Score=1199.13 Aligned_cols=591 Identities=79% Similarity=1.326 Sum_probs=544.7
Q ss_pred CCccchHHHHHH---HHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCC
Q 043219 1 MRSLSFCIFIFL---VAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAG 77 (591)
Q Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAG 77 (591)
|++|+|..+.++ |+.-..++...++|.++|++||+||++||||+||++++++||++||++||...++||+|||||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nY~~aL~~Sl~Fy~aQRsG~Lp~~~~~~WR~ds~l~Dg~~~~~DlsGGwyDAG 82 (614)
T PLN02340 3 KTSLSLGGAALLLLVLAAAASAAAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAG 82 (614)
T ss_pred ccccchhHHHHHHHHHHhhhccccCCCcHHHHHHHHHHHHHHhcCcCCCccCCCcccccccCCCcccccCCCCCCceeCC
Confidence 456666444443 44446677788999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 043219 78 DHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTP 157 (591)
Q Consensus 78 D~~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~ 157 (591)
||+||++|||+|+++|+|+++||++.++++|++|||||||||++|||||||++++.||+||||++.||.+|.+||+|+.+
T Consensus 83 D~vKf~~p~a~t~t~L~w~~~ef~~~~~~~~~~~~~ldeirw~~Dyllk~~~~~~~~~~qVGdg~~DH~~W~~PE~~~~~ 162 (614)
T PLN02340 83 DHVKFGLPMAFAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTP 162 (614)
T ss_pred CcceecchhHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcccccCCChhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHH
Q 043219 158 REAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLL 237 (591)
Q Consensus 158 R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~ 237 (591)
|++|++++++|||++++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++.+.++|+++++.|||+
T Consensus 163 R~~y~i~~~~pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~a~~~Y~ss~~~DEl~ 242 (614)
T PLN02340 163 RTAYKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKKFYTSSGYSDELL 242 (614)
T ss_pred CceeecCCCCCccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCccccCCCCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888777788999999999999
Q ss_pred HHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhh
Q 043219 238 WAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACV 317 (591)
Q Consensus 238 wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 317 (591)
|||+|||+||||++|++++..+...++...|...+|+||+|++|+++|+++++..++...+...+++|++.+|.|+|.++
T Consensus 243 WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~ 322 (614)
T PLN02340 243 WAAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYFACACL 322 (614)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998876656656676668999999999999999887654444455667789999999999888
Q ss_pred ccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCc
Q 043219 318 QKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMS 397 (591)
Q Consensus 318 ~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~S 397 (591)
.+++++++++||+||+|+..|||+||+++++||+++|++++..+.+.++|+++..++.+|++||++|||||||+||+++|
T Consensus 323 ~~~~g~~v~~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~S 402 (614)
T PLN02340 323 QKNGGYNIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMS 402 (614)
T ss_pred ccCCCCccccCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCCCCCCc
Confidence 88788999999999999999999999999999999999999877778999988788999999999999999999999999
Q ss_pred eEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccc
Q 043219 398 YLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTA 477 (591)
Q Consensus 398 yV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~ 477 (591)
||||||+|+|+|||||+|+||.+..++.++.|.+|+++|++++.++|++|+||||||||.+|+|.|+|++|++|||||||
T Consensus 403 YVVGyG~n~P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~np~vL~GALVGGPd~~D~y~D~r~~y~~nEvAidy 482 (614)
T PLN02340 403 YMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTLSG 482 (614)
T ss_pred eEeccCCCCCCccccccccCCccccccccccCcccccccccCCCCCCCCCCCceeeCCCCCCCCCccccccccccceeeh
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhccC---C---C-C------C-----CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEe
Q 043219 478 CAPLVGLFSKLQGS---S---K-T------S-----ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIE 539 (591)
Q Consensus 478 NA~lv~~la~l~~~---~---~-~------~-----~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~ 539 (591)
|||||++||+|... . + + | ..++++.|+++++|..++++|||+.|+|+|++..||+..++.+.
T Consensus 483 NAplvg~lA~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~sw~~~g~~y~~~~v~i~N~s~~pi~~l~~~~~ 562 (614)
T PLN02340 483 NAPLVGLFAKLQSASETADAYGSYKPTPNTSSPKQSGAPVEFVHSITNTWTAGGTTYYRHKVIIKNKSQKPITDLKLVIE 562 (614)
T ss_pred hHHHHHHHHHHHhccccccccccCCCCCCCCCcccCCCchhhhhhheeeeecCCceEEEEEEEEEeCCCCCchhhhhhhh
Confidence 99999999999873 1 1 1 1 23346668999999999999999999999999999999999888
Q ss_pred cCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEecCCCceeeeeccC
Q 043219 540 NLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQGGPQAKVSVLSYN 591 (591)
Q Consensus 540 ~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~~~~a~~~v~~~~ 591 (591)
.....+|++..++..+.+++|+|..+|++|++.+|+||..++|++++|.+||
T Consensus 563 ~l~g~lwgl~~~~~~~~y~~p~~~~tl~~g~~~~f~yi~~~~~~~~~~~~y~ 614 (614)
T PLN02340 563 DLSGPIWGLNPTKEKNTYELPQWQKVLQPGSQLSFVYVQGGPQAKVSVLSYN 614 (614)
T ss_pred hcccchhcceeccccCCccCchhhhccCCCCeeEEEeccCCcchheeccccC
Confidence 6656999997665567899999999999999999999977789999999997
No 2
>PLN02171 endoglucanase
Probab=100.00 E-value=5e-144 Score=1189.88 Aligned_cols=574 Identities=52% Similarity=0.993 Sum_probs=534.8
Q ss_pred hhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHH
Q 043219 15 FKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLA 94 (591)
Q Consensus 15 ~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~ 94 (591)
++..++++.++|.++|++||+||++||||++|++++++||++|++.||++.++||+|||||||||+||++|+|+|+++|+
T Consensus 20 ~s~~~~~~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~vDlsGGwyDAGD~vKf~~p~a~s~t~L~ 99 (629)
T PLN02171 20 LCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMS 99 (629)
T ss_pred cccccccCchhHHHHHHHHHHHHHHccCCCCCcccCCCCccCCCCCCCCcCcccCCCCceeCCCCceeccchHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHH
Q 043219 95 WGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAG 174 (591)
Q Consensus 95 ~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~ 174 (591)
|+++||++.+++.++++|+||||||++|||||||+++++||+|||+++.||.+|.+||+|+.+|++|.|++++|||++++
T Consensus 100 w~~~e~~~~~~~~g~~~~~Ldeikw~~Dyllk~~~~~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~i~~~~pgSd~a~ 179 (629)
T PLN02171 100 WSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLAG 179 (629)
T ss_pred HHHHHhHHHHhhcCCcHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCccccCcCChhHccccceeEEecCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CCchHHHHHHHHHHHHHcCchHHH
Q 043219 175 ETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS-SGYSDDLLWAATWLYRATNEEYYL 253 (591)
Q Consensus 175 ~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~-~~~~De~~wAAaeLy~aTgd~~Yl 253 (591)
++|||||+||||||++||+||++||+|||++|+||+++|+.|+++++...++|++ ++|.|||+|||+|||+||||++|+
T Consensus 180 e~AAAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~Y~s~s~y~DEl~WAAawLy~ATgd~~Yl 259 (629)
T PLN02171 180 ETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGDELLWAAAWLYQATNNQYYL 259 (629)
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcccCCccCCCCCccHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999999999999999999998887778899976 689999999999999999999999
Q ss_pred HHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCce
Q 043219 254 KYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLM 333 (591)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~ 333 (591)
++++++...++...|...+|+||+|++|+++|++++++.++...+...+++|++.+|.|+|.++.+. ..++.+||+|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~~~l~~~-~~~~~~TpgGl~ 338 (629)
T PLN02171 260 DYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKG-ARNVQKTPGGLI 338 (629)
T ss_pred HHHHHHHHhhccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHhhccCC-CceeeecCCeeE
Confidence 9999877667666777778999999999999999887654444566788899999999999888763 357889999999
Q ss_pred eccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccc
Q 043219 334 YVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHR 413 (591)
Q Consensus 334 ~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR 413 (591)
|...|||+||++|++||+++|+|++....+.++|..+.....+|++||++|||||||+||+++|||||||+|+|++||||
T Consensus 339 ~~~~Wgs~~y~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR 418 (629)
T PLN02171 339 YRQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHR 418 (629)
T ss_pred EECCCChHHHHHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCcccc
Confidence 99999999999999999999999987666679998887889999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCCC
Q 043219 414 GSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSK 493 (591)
Q Consensus 414 ~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~ 493 (591)
+|+||.++.+|.+++|.+|+++|++++.++|++|+||||||||.+|+|.|+|.+|++||||||||||||++||+|....+
T Consensus 419 ~as~~~~~~~~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEva~d~NA~~vg~lA~l~~~~~ 498 (629)
T PLN02171 419 GSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHG 498 (629)
T ss_pred cccCCccccCccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCceeEecchHHHHHHHHHHhhcC
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999987321
Q ss_pred C---------------------C------------CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEec
Q 043219 494 T---------------------S------------ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIEN 540 (591)
Q Consensus 494 ~---------------------~------------~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~ 540 (591)
+ | ...++|+|+++++|..++++|+|++|+|+|++..+|++.+|..+.
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~i~q~v~~sW~~~g~~y~qy~v~I~N~s~~~ik~i~i~~~~ 578 (629)
T PLN02171 499 GYNQLLVVVPAPSEVAINRTPAPQRRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISK 578 (629)
T ss_pred CccccccccCCccccccccCCCCCCCcccCCCccCcceeEEEEEEEEEEEcCCceEEEEEEEEEECCCCceeeeeeeecc
Confidence 1 0 125789999999999999999999999999999999999998775
Q ss_pred CCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEecCCCceeeeeccC
Q 043219 541 LSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQGGPQAKVSVLSYN 591 (591)
Q Consensus 541 ~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~~~~a~~~v~~~~ 591 (591)
...++||+ .+.++.+++|+|..+|++|++++||||..+.||+++|++|.
T Consensus 579 ~~~~iW~v--~~~~ngytlPs~~~sL~aG~s~tFgyI~~~~pA~~~v~~y~ 627 (629)
T PLN02171 579 LYGPLWGL--TKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYK 627 (629)
T ss_pred ccccchhe--eecCCcccCchhhcccCCCCeeEEEeecCCCCceEEEEEEE
Confidence 56899999 45677799999999999999999999988669999999983
No 3
>PLN02420 endoglucanase
Probab=100.00 E-value=1.4e-125 Score=1024.67 Aligned_cols=477 Identities=60% Similarity=1.061 Sum_probs=444.1
Q ss_pred hccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHH
Q 043219 17 AAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWG 96 (591)
Q Consensus 17 ~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a 96 (591)
+.+.+++++|.++|++||+||++||||++|..++++||++|++.||.+.++||+|||||||||+||++|+|+|+++|+|+
T Consensus 33 ~~~~i~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~ 112 (525)
T PLN02420 33 SETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWS 112 (525)
T ss_pred ccccCCcccHHHHHHHHHHHHHHhcCCCCCcCCCCcccccCcCcCCCcCcccCCCcceecCccceecchHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHH
Q 043219 97 TIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGET 176 (591)
Q Consensus 97 ~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~ 176 (591)
++||++.++..+++|||||||||++|||||||++++.+|+||||++.||.+|++||+++.+|++|.|++++|+|++++++
T Consensus 113 ~~ef~d~~~~~g~~~d~Ldeikw~lD~llk~~~~~~~~~~qvGdg~~DH~~w~~Pe~~~~~R~~~~i~~~~pgsd~aa~~ 192 (525)
T PLN02420 113 VIEYGDQLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGET 192 (525)
T ss_pred HHHHHHhhhhcCCcHHHHHHHHHHHHHHHHhCcCCCceEEeeCCCCcccccccChhhccccCceEEecCCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CCchHHHHHHHHHHHHHcCchHHHHH
Q 043219 177 AAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS-SGYSDDLLWAATWLYRATNEEYYLKY 255 (591)
Q Consensus 177 AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~-~~~~De~~wAAaeLy~aTgd~~Yl~~ 255 (591)
|||||+||||||++||+||++||++||++|+||+++|+.|.++.+...++|++ +++.||++|||+|||++|||++|+++
T Consensus 193 AAALA~AS~vfk~~D~~YA~~~L~~Ak~ly~fA~~~~g~y~~~~~~~~g~Y~s~s~y~DEl~WAAawLY~ATgd~~Yl~~ 272 (525)
T PLN02420 193 AAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWGATWLYRATDNEHYMSY 272 (525)
T ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhcCCccCCCCcccCCCCCCcCcccHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999999999999998777677889975 88999999999999999999999999
Q ss_pred HHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccC-CCcccccCCCCcee
Q 043219 256 VVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKN-AGYNVHLTPGGLMY 334 (591)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~t~~g~~~ 334 (591)
+.++...++...|...+|+||+|..|+++|++++....+...++..++.|++.++.++|.++++. ++..+.+||+|++|
T Consensus 273 a~~~~~~~~~~~~~~~~~~WD~k~~G~~~Lla~~~~~~~~~~~~~~l~~y~~~ad~~~~~~~~~~~~~~~~~~TpgGl~~ 352 (525)
T PLN02420 273 VVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLY 352 (525)
T ss_pred HHHHHHhcCCccccCcccCCcccHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHhhccCCCCCCcccccCCeeEE
Confidence 98876666666777678999999999999999886543333345677889999999999877653 34578899999999
Q ss_pred ccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCcccccccc
Q 043219 335 VREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRG 414 (591)
Q Consensus 335 ~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~ 414 (591)
...|||+||++|++||+++|++++..+.++++|..+...+.+|++||++|||||||+||+++|||||||.|+|++||||.
T Consensus 353 ~~~Wgs~ryaan~afla~vya~~l~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~ 432 (525)
T PLN02420 353 VRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPTRVHHRG 432 (525)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHhhhhhccCCCCCCceEeccCCCCCCCccccc
Confidence 99999999999999999999999987777899988777889999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCCC
Q 043219 415 SSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSK 493 (591)
Q Consensus 415 s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~ 493 (591)
||||.++..+..++|.+|+.+|++.+.||||+|+||||||||.+|.|.|+|.+|++|||+|||||+||++||+|.....
T Consensus 433 As~p~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GALVGGPd~~D~y~D~r~~y~~nE~~~~~nA~~vg~lA~L~~~~~ 511 (525)
T PLN02420 433 ASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRGNYVQTEACTYNTAPLVGVFARLIELEE 511 (525)
T ss_pred cCCCccccccccccCcccccccccCCCCCcccccCceecCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHhcc
Confidence 9999877777888999999999999999999999999999999999999999999999999999999999999997643
No 4
>PLN00119 endoglucanase
Probab=100.00 E-value=2.4e-125 Score=1015.16 Aligned_cols=479 Identities=53% Similarity=0.987 Sum_probs=442.1
Q ss_pred ccchHHHHHHHHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCccc
Q 043219 3 SLSFCIFIFLVAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKF 82 (591)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky 82 (591)
.||+||++| -.+|......++|.++|++||+||++||||.+|+.+|++||++|++.||.+.++||+|||||||||+||
T Consensus 11 ~~~~~~~~~--~~~~~~~~~~~nY~~aL~~sl~Ff~aQRsG~lp~~~r~~WRgds~~~dg~~~~~DlsGGwyDAGD~~Kf 88 (489)
T PLN00119 11 TLSICIVLL--VMSMARGAVSTNYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKF 88 (489)
T ss_pred HHHHHHHHH--HHHHhcccccccHHHHHHHHHHHhHhcCCCCCCccCCCCCcCcccccCCCCCcccCCCCceeCCCCcee
Confidence 477887654 346888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceee
Q 043219 83 GLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFK 162 (591)
Q Consensus 83 ~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~ 162 (591)
++|+|+|+++|+|+++||++.|++.+++++||||||||+|||||||++++.||+|||++..||.+|++||+++.+|++|.
T Consensus 89 ~~p~a~s~t~L~w~~~ef~~~~~~~~~~~~~lde~kw~~Dyllk~~~~~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~ 168 (489)
T PLN00119 89 GFPLAFTTTMLAWSNIEMGSQLKAHHELGNALAALKWATDYLIKAHPQPNVLYGQVGDGNSDHACWMRPEDMTTPRTSYR 168 (489)
T ss_pred CcchHHHHHHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcccccCChhhCCCcCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHH
Q 043219 163 LDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATW 242 (591)
Q Consensus 163 ~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAae 242 (591)
|++++|+|++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++++..+++|+++++.||++|||+|
T Consensus 169 i~~~~pgSd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~~~g~Y~ss~~~DEl~WAAaw 248 (489)
T PLN00119 169 IDAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPNAGGFYASSGYEDELLWAAAW 248 (489)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCCCchhhHHHHHHHH
Confidence 99899999999999999999999999999999999999999999999999999988776678999999999999999999
Q ss_pred HHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCC
Q 043219 243 LYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAG 322 (591)
Q Consensus 243 Ly~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 322 (591)
||++|||++|+++++..... .. + ..+|+||+|++|+++||++++..++.. .+..++.|++.++.++|.++++ ..
T Consensus 249 LY~aTgd~~Yl~~~~~~~~~-~~--~-~~~f~Wd~k~~g~~vlLa~l~~~~~~~-~~~~~~~y~~~ae~~~~~~~~~-~~ 322 (489)
T PLN00119 249 LHRATNDQTYLDYLTQASNT-GG--P-RTVFAWDDKFVGAQVLVAKLALEGKVE-SNGKIVEYKSMAEQFICNCAQK-GS 322 (489)
T ss_pred HHHHhCCHHHHHHHHhcccc-CC--C-CcccChhhhHHHHHHHHHHHhccCCCc-chHHHHHHHHHHHHHHHhhccC-CC
Confidence 99999999999998764321 11 1 246999999999999999987654322 2344678999999999987654 23
Q ss_pred cccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEee
Q 043219 323 YNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGY 402 (591)
Q Consensus 323 ~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~ 402 (591)
..+.+||+||+|...||++||++|++||+++|++++..++..+.|+.......+|++||++|||||||+||+++||||||
T Consensus 323 ~~~~~TpgGl~~~~~wg~~ry~~~~afla~~ya~yl~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGy 402 (489)
T PLN00119 323 NNVKKTPGGLLWFLPWNNLQYTTAASFVLSAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMSYMVGY 402 (489)
T ss_pred ccceecCCeeEEecCCccHHHHHHHHHHHHHHHHHHhhcccccccCCCCcCHHHHHHHHHHHHHHhcCCCCCCCceEeec
Confidence 46789999999999999999999999999999999877777889988777889999999999999999999999999999
Q ss_pred CCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhh
Q 043219 403 GPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLV 482 (591)
Q Consensus 403 G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv 482 (591)
|+|+|++||||+||||.+..++.+++|.+|+..|++++.||||+|.||||||||.+|.|.|+|.+|++|||||||||+||
T Consensus 403 G~n~P~~pHHR~as~~~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~v 482 (489)
T PLN00119 403 GTNYPKKPHHRGASIVSIKKDKTPVTCSGGFDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNFQQAEPATVTVAPFV 482 (489)
T ss_pred CCCCCCccccccCCCCccccCCcccCCCCCccccccCCCCCcceecceeecCCCCCCCcCccccccccCcceeecchHHH
Confidence 99999999999999999888889999999998899999999999999999999999999999999999999999999999
Q ss_pred hhhhhhc
Q 043219 483 GLFSKLQ 489 (591)
Q Consensus 483 ~~la~l~ 489 (591)
++||+|.
T Consensus 483 galA~l~ 489 (489)
T PLN00119 483 GVLAAVA 489 (489)
T ss_pred HHhhhcC
Confidence 9999873
No 5
>PLN02613 endoglucanase
Probab=100.00 E-value=9.7e-123 Score=998.47 Aligned_cols=478 Identities=50% Similarity=0.897 Sum_probs=437.9
Q ss_pred cchHHHHHHHHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccc
Q 043219 4 LSFCIFIFLVAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFG 83 (591)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~ 83 (591)
|.+.|++..++.+..+++.+++|.++|++||+||++||||++|+.++++||++||+.|+.+.++||+|||||||||+||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~Fy~~QRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Ky~ 84 (498)
T PLN02613 5 LVLMLVGMFLAFESLVALESPDYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGKPENVNLTGGYYDAGDNVKFG 84 (498)
T ss_pred hHHHHHHHHHHhhceeecccchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccccCCCcccCcccCCCCceeCCCCceec
Confidence 44455566667779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeec
Q 043219 84 LPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKL 163 (591)
Q Consensus 84 ~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~ 163 (591)
+|+|+++++|+|+++||++.++++|++|||||||||++|||||||+++++||+||||+..||.+|++||+++.+|++|.+
T Consensus 85 ~p~a~s~t~L~w~~~e~~~~~~s~~~~~d~ldeikw~lD~llkm~~~~~~~~~QVGdg~~dH~~W~~Pe~~~~~R~~~~~ 164 (498)
T PLN02613 85 WPMAFTVTLLSWAAIEYQNEISSVNQLGYLRSAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKI 164 (498)
T ss_pred CchHHHHHHHHHHHHHhHHHHhhcCCchHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCccccccCCccccCCCCeeEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCC-CCCchHHHHHHHHH
Q 043219 164 DQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYT-SSGYSDDLLWAATW 242 (591)
Q Consensus 164 ~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~-~~~~~De~~wAAae 242 (591)
++++|+|++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++ .++|. .+++.||++|||+|
T Consensus 165 t~~~pgTd~a~~~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~~a~~~~g~y~~~----~~~y~s~s~~~DEl~WAAaw 240 (498)
T PLN02613 165 TSSSPGSEAAGEAAAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQAS----CPFYCSYSGYQDELLWAAAW 240 (498)
T ss_pred CCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCCcCCC----CCcccccCccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998753 35674 47899999999999
Q ss_pred HHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCC
Q 043219 243 LYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAG 322 (591)
Q Consensus 243 Ly~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 322 (591)
||++|||++|+++++.+..... ....|+||+|..|+++|++++.+.++ ...+.|++.++.++|.++.+...
T Consensus 241 Ly~aTGd~~Yl~~~~~~~~~~~----~~~~~~Wd~~~~G~~vLla~~~~~~~-----~~~~~yk~~~e~~~~~~~~~~~~ 311 (498)
T PLN02613 241 LYKATGEKKYLNYVISNKGWSQ----AVNEFSWDNKFAGAQALLASEFYGGA-----NDLAKFKTDVESFVCALMPGSSS 311 (498)
T ss_pred HHHHhCCHHHHHHHHhcccccc----CCCccCccchHHHHHHHHHHHHhcCc-----chHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999987532111 12468999999999999998755322 23467888999999988766444
Q ss_pred cccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhh-cccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEe
Q 043219 323 YNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAAN-AKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVG 401 (591)
Q Consensus 323 ~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G 401 (591)
..+.+||+|++|...||++||++|++||+++|++++.... +.+.|.....+..+|++||++|||||||+||+++|||||
T Consensus 312 ~~~~~TPgGL~~~~~wg~lry~~~~afla~~ya~~l~~~~~~~~~c~~~~~~~~~~~~~a~~Qi~yiLG~Np~~~syvvG 391 (498)
T PLN02613 312 VQIKTTPGGLLFTRDSSNLQYVTTATTVLFIYSKTLTKAGVGGIQCGSAQFSASQIRNFAKSQVDYILGNNPMKMSYMVG 391 (498)
T ss_pred cccccCCCceEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHhHHHhcCCCCCCCcceec
Confidence 5789999999999999999999999999999999986543 568888776778999999999999999999999999999
Q ss_pred eCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchh
Q 043219 402 YGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPL 481 (591)
Q Consensus 402 ~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~l 481 (591)
||.|+|++||||+||||.++..|.++.|.+|+++|++++.|+|+++.||||||||.+|.|.|+|.+|++|||||||||+|
T Consensus 392 ~G~n~P~~pHHR~as~p~~~~~~~~~~c~~g~~~~~~~~~Pnp~~l~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~ 471 (498)
T PLN02613 392 FGTKYPTQIHHRGSSIPSIQVLPEKVDCNGGFSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHAEPTTYINAAF 471 (498)
T ss_pred cCCCCCCcccccccCCCccccCccccCCCCCccccccCCCCCCceeeeeeecCCCcCCCccccccccccccceeecccHH
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCC
Q 043219 482 VGLFSKLQGSSKT 494 (591)
Q Consensus 482 v~~la~l~~~~~~ 494 (591)
|++||+|......
T Consensus 472 vgalA~l~~~~~~ 484 (498)
T PLN02613 472 VGSVAALIKQVSR 484 (498)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999987664
No 6
>PLN02266 endoglucanase
Probab=100.00 E-value=6.1e-123 Score=1000.97 Aligned_cols=465 Identities=49% Similarity=0.870 Sum_probs=427.2
Q ss_pred ccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHH
Q 043219 20 DAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIE 99 (591)
Q Consensus 20 ~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~e 99 (591)
.+.+++|.++|++||+||++||||++|++++++||++||+.||...++||+|||||||||+||++|+|+++++|+|+++|
T Consensus 41 ~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~e 120 (510)
T PLN02266 41 RLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIE 120 (510)
T ss_pred CCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCcceeCCCCceecchHHHHHHHHHHHHHh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHH
Q 043219 100 YRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAA 179 (591)
Q Consensus 100 f~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAa 179 (591)
|++.++ +++|||||||||++|||||||+.+|+||+|||+++.||.+|++||+++.+|++|.|+.++|||++++++|||
T Consensus 121 f~~~~~--~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAA 198 (510)
T PLN02266 121 FGGLMK--SELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAA 198 (510)
T ss_pred hhhccc--cccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHH
Confidence 999885 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cccCCCCC-CCCchHHHHHHHHHHHHHcCchHHHHHHH
Q 043219 180 LAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSI-KCAKQFYT-SSGYSDDLLWAATWLYRATNEEYYLKYVV 257 (591)
Q Consensus 180 lA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~-~~~~g~Y~-~~~~~De~~wAAaeLy~aTgd~~Yl~~~~ 257 (591)
||+||||||++||+||++||++||++|+||+++|+.|.+.+ +...++|. .+++.||++|||+|||++|||++|+++++
T Consensus 199 LAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~ 278 (510)
T PLN02266 199 LAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQ 278 (510)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999987754 23456775 47899999999999999999999999998
Q ss_pred HhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceeccc
Q 043219 258 DNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYVRE 337 (591)
Q Consensus 258 ~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 337 (591)
.....++... ....|+||+|..|+++||++++... ....+..|++.++.++|.++.+++...+++||+||+|...
T Consensus 279 ~~~~~~g~~~-~~~~~~WD~k~~ga~vLLa~~~~~~----~~~~~~~yk~~~d~~~~~~~~~~~~~~~~~TpGGL~~~~~ 353 (510)
T PLN02266 279 VNGQILGADE-FDNTFGWDNKHVGARILLSKAFLVQ----KVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMS 353 (510)
T ss_pred HHHhhccccc-cCCccCcchhHHHHHHHHHHHHhhc----chHHHHHHHHHHHHHHHhccCCCCCCccccCCCeeEEeCC
Confidence 7655444221 2347999999999999999876432 1345678999999999988766444467999999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcc
Q 043219 338 WNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSM 417 (591)
Q Consensus 338 Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~ 417 (591)
||++||++|++||+++|++++..+++.+.|......+.+|++||++|||||||+||+++|||||||.|+|++||||+|||
T Consensus 354 wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHHR~as~ 433 (510)
T PLN02266 354 DSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSL 433 (510)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccccCCCC
Confidence 99999999999999999999987777888887667889999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCC
Q 043219 418 ASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSS 492 (591)
Q Consensus 418 ~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~ 492 (591)
|.+...|.+++|.+|+. |++++.+|||+|.||||||||.+|.|.|+|.+|++|||||||||+||++||+|....
T Consensus 434 p~~~~~~~~~~C~~g~~-~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~y 507 (510)
T PLN02266 434 PSVAAHPAKIQCSQGFS-IMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSY 507 (510)
T ss_pred CCcccCccccCCCCCcc-ccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeecchHHHHHHHHHHHHh
Confidence 99888888999999986 889999999999999999999999999999999999999999999999999998654
No 7
>PLN02175 endoglucanase
Probab=100.00 E-value=2.4e-122 Score=989.23 Aligned_cols=479 Identities=44% Similarity=0.819 Sum_probs=432.2
Q ss_pred CCccchHHHHHHHHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCc
Q 043219 1 MRSLSFCIFIFLVAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHV 80 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~ 80 (591)
|.|-.|.+|++++.+++++.. ..+|.++|++||+||++||||+||+++|++||++||+.||.+.++||+|||||||||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~Y~~aL~kSl~Fy~aQrsG~Lp~~~r~~WRgds~l~Dg~~~~~DlsGGwyDAGD~v 79 (484)
T PLN02175 1 MTSPFFFVFLFSSLLIENTDA-NPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNV 79 (484)
T ss_pred CCCcchhHHHHHHHHHhhccc-cccHHHHHHHHHHHHHHhhCcCCCCcCCCCCccccccccCccCccCCCCCeeeCCCCC
Confidence 566677777777777777654 4799999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc-cCCCeEEEEeCCCCCCCCCCCCCCCCCCCcc
Q 043219 81 KFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH-TQPNVLWAQVGDGDSDHYCWERAEDMTTPRE 159 (591)
Q Consensus 81 Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~-~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~ 159 (591)
||++|+|+|+++|+|+++||++.+. ++++++||||||++||||||| +++|+||+|||++..||.+|++||+++.+|+
T Consensus 80 Kf~~p~A~t~t~LaW~~~e~~~~~~--~~~~~~l~~lkw~~Dyllk~~~~~~g~vy~qVG~~~~Dh~~W~~PE~~~~~R~ 157 (484)
T PLN02175 80 KFNFPMAFTTTMLSWSALEYGKRMG--PELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRT 157 (484)
T ss_pred eeCchHHHHHHHHHhhhhhcccccc--hHHHHHHHHHHHHHHHHHhCcCCCCCeEEEEeCCCCCCcccCCChhHccCccc
Confidence 9999999999999999999998874 578999999999999999998 5789999999999999999999999999999
Q ss_pred eeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc-cCCCCC-CCCchHHHH
Q 043219 160 AFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKC-AKQFYT-SSGYSDDLL 237 (591)
Q Consensus 160 ~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~-~~g~Y~-~~~~~De~~ 237 (591)
+|.|++++|||++++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++. ..++|. ++++.||++
T Consensus 158 ~~~is~~~PGSd~aae~AAALAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~~Y~s~s~y~DEl~ 237 (484)
T PLN02175 158 VYSVSPSNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELM 237 (484)
T ss_pred eEecCCCCCccHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCcccCccccccCccccCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876532 357885 488999999
Q ss_pred HHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhh
Q 043219 238 WAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACV 317 (591)
Q Consensus 238 wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 317 (591)
|||+|||+||||++|+++++... . .+...+|+||+|..|+++|++++.+.++. .-.+.|++.++.++|.++
T Consensus 238 WAAawLY~ATgd~~Yl~~~~~~~----~-~~~~~~~~Wd~k~~g~~vLla~~~~~~~~----~~~~~y~~~~~~~~~~~~ 308 (484)
T PLN02175 238 WGASWLLRATNDPYYANFIKSLG----G-GDQPDIFSWDNKYAGAYVLLSRRALLNKD----SNFEQYKQAAENFICKIL 308 (484)
T ss_pred HHHHHHHHHhCCHHHHHHHHHcC----C-CCCCCccCCcCHHHHHHHHHHHhhhcCCC----chHHHHHHHHHHHHHhcc
Confidence 99999999999999999887522 1 11234799999999999999986543322 224578899999999988
Q ss_pred ccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCc
Q 043219 318 QKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMS 397 (591)
Q Consensus 318 ~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~S 397 (591)
++.....+.+||+||+|...||++||++|++||+++|++++...+..+.|.+......+|++||++|||||||+||+++|
T Consensus 309 ~~~~~~~~~~TpgGL~~~~~wg~lrya~~~afla~~ya~~l~~~~~~~~cg~~~~~~~~~~~fA~~Q~~yiLG~np~~~s 388 (484)
T PLN02175 309 PDSPSSSTQYTQGGLMYKLPQSNLQYVTSITFLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMS 388 (484)
T ss_pred CCCCCccccccCCceEEECCCCcHHHHHHHHHHHHHHHHHHhhcccccccCCCccCHHHHHHHHHHhhhhhccCCCCCCc
Confidence 76545678999999999999999999999999999999998766677889887778899999999999999999999999
Q ss_pred eEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccc
Q 043219 398 YLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTA 477 (591)
Q Consensus 398 yV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~ 477 (591)
||||||.|+|++||||.||||.....+..++|.+|+. |++++.+|||+|.||||||||.+|.|.|+|.+|++|||||||
T Consensus 389 yvvG~g~n~p~~pHHR~AS~p~~~~~~~~~~C~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~dy~~nEva~dy 467 (484)
T PLN02175 389 YMVGFSSNFPKRIHHRASSLPSHALRSNSLGCNGGFQ-SFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYI 467 (484)
T ss_pred eEeecCCCCCCCccccccCCCcccccccccCCCCCcc-cccCCCCCcceecceeecCCCCCCCcCccccccccCcceeec
Confidence 9999999999999999999998776666789999986 566789999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhccCC
Q 043219 478 CAPLVGLFSKLQGSS 492 (591)
Q Consensus 478 NA~lv~~la~l~~~~ 492 (591)
||+||++||+|...-
T Consensus 468 NA~~vgalA~l~~~~ 482 (484)
T PLN02175 468 NAAFVGPLAYFAAGR 482 (484)
T ss_pred chHHHHHHHHHhcCC
Confidence 999999999998764
No 8
>PLN02909 Endoglucanase
Probab=100.00 E-value=2.3e-122 Score=991.33 Aligned_cols=457 Identities=50% Similarity=0.887 Sum_probs=418.4
Q ss_pred cccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHH
Q 043219 19 ADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTI 98 (591)
Q Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ 98 (591)
....+++|.++|++||+||++||||+||+.++++||++||++||...++||+|||||||||+||++|+|+++++|+|+++
T Consensus 28 ~~~~~~nY~~aL~~sl~Fy~aQRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~~~L~w~~~ 107 (486)
T PLN02909 28 AVGTHFNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAWSTL 107 (486)
T ss_pred ccCCCCcHHHHHHHHHHHHHHhcCcCCCCCCCCCCCcccccccCCccccCCCCCceeCCCCceeCCchHHHHHHHHHHHH
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHH
Q 043219 99 EYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAA 178 (591)
Q Consensus 99 ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AA 178 (591)
||++.|++.+++|||||||||++|||||||+.+|+||+|||++..||.+|++||+|+.+|++|.|++++|||++++++||
T Consensus 108 ~y~~~~~~~g~~~d~ldeikw~~D~llk~~~~~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~i~~~~pgtd~a~~~AA 187 (486)
T PLN02909 108 AYEKELRATGELENVRAAIRWGTDYFLKAASRKNRLYVQVGDPNLDHQCWVRPENMKTPRTVLEIDEKTPGTEIAAETAA 187 (486)
T ss_pred HhHHHHhhcCChHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhccCCceeEecCCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CCchHHHHHHHHHHHHHcCchHHHHHHH
Q 043219 179 ALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS-SGYSDDLLWAATWLYRATNEEYYLKYVV 257 (591)
Q Consensus 179 alA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~-~~~~De~~wAAaeLy~aTgd~~Yl~~~~ 257 (591)
|||+||||||++||+||++||++||++|+||+++|+.|... .+||.+ ++|.||++|||+|||++|||++|+++++
T Consensus 188 AlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~----~~~y~s~s~y~DEl~WAAawLy~aTgd~~Yl~~~~ 263 (486)
T PLN02909 188 AMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGE----CPFYCSYSGYNDELLWAATWLYKATKKQMYLKYIK 263 (486)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCcCCC----CCccccCCCcchHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999988643 357754 7899999999999999999999999987
Q ss_pred HhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceeccc
Q 043219 258 DNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYVRE 337 (591)
Q Consensus 258 ~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 337 (591)
.... . ....+|+||+|..|+++||+++....+ ..++.|++.+|.++|.++++.....+.+||+|++|...
T Consensus 264 ~~~~--~---~~~~~~sWD~k~~g~~~lLa~~~~~~~-----~~~~~y~~~ad~~~~~~~~~~~~~~~~~TpgGl~~~~~ 333 (486)
T PLN02909 264 HEAI--S---ASVAEFSWDLKYAGAQVLLSKLNFEGE-----KGLQSYKQQADSFVCSVLPGSPFHQVFITPGGMIHLRD 333 (486)
T ss_pred hccc--c---cCCCccCCcccccHHHHHHHHhhcccc-----hhHHHHHHHHHHHHHHhccCCCCcccccCCCceeEecC
Confidence 5321 1 112368999999999999988743221 23478999999999987665333456789999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcc
Q 043219 338 WNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSM 417 (591)
Q Consensus 338 Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~ 417 (591)
|||+||+++++||+++|++++.....++.|......+++|++||++|||||||+||+++|||||||+|+|++||||+|||
T Consensus 334 wgn~rya~~aafLa~~ya~~l~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~ 413 (486)
T PLN02909 334 GANSQYVTSTAFLFSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGASV 413 (486)
T ss_pred CChHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCceEeccCCCCcCCccccccCC
Confidence 99999999999999999999876667789987777889999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhcc
Q 043219 418 ASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQG 490 (591)
Q Consensus 418 ~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~ 490 (591)
|..+. +.+++|.+|+.+|++++.||||+|.||||||||.+|.|.|+|.+|++|||||||||+||++||+|..
T Consensus 414 ~~~~~-~~~~~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nE~a~dyNA~~vg~lA~l~~ 485 (486)
T PLN02909 414 PVLPA-NTPVNCGLSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEPCTYINSLAVGVLAKLAA 485 (486)
T ss_pred CCccc-CcccCCCCcccccccCCCCCcceeccceecCCCCCCCccccccccccCcceeecchHHHHHHHHHhc
Confidence 87544 5788999999889999999999999999999999999999999999999999999999999999975
No 9
>PLN02308 endoglucanase
Probab=100.00 E-value=5.2e-122 Score=993.00 Aligned_cols=475 Identities=46% Similarity=0.854 Sum_probs=430.5
Q ss_pred HHHHHHHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchH
Q 043219 8 IFIFLVAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAA 87 (591)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a 87 (591)
|++|++-++....+.+++|.++|++||+||++||||++|++++++||+++++.||++.++||+|||||||||+||++|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~Y~~al~~sl~fy~~QRsG~lp~~~~~~Wr~~s~~~dg~~~~~DlsGGWyDAGD~~Ky~~p~a 90 (492)
T PLN02308 11 IVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAGDNVKFGFPMA 90 (492)
T ss_pred HHHHHHHHccccccCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCcCCCCCCCeeeCCCCceeCCCcCeecCchH
Confidence 44444455567788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCC
Q 043219 88 FTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYH 167 (591)
Q Consensus 88 ~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~ 167 (591)
+|+++|+|+++||++.+. .+.+++|||||||+|||||||+.+|+||||||++..||.+|++||+++.+|++|.+++++
T Consensus 91 ~s~t~L~w~~~e~~~~~~--~e~~~~ldeikw~~D~llkm~~~~~~vy~qVg~~~~dh~~W~~Pe~~~~~R~~y~~~~~~ 168 (492)
T PLN02308 91 FTTTLMSWSIIDFGRTMG--PELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRTVYKIDPSH 168 (492)
T ss_pred HHHHHHHHHHHHhHhhhc--chhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCCCCCccCCCChhHcCCcceEEecCCCC
Confidence 999999999999999884 578999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc-cCCCCCC-CCchHHHHHHHHHHHH
Q 043219 168 PGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKC-AKQFYTS-SGYSDDLLWAATWLYR 245 (591)
Q Consensus 168 p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~-~~g~Y~~-~~~~De~~wAAaeLy~ 245 (591)
|+|++++++|||||+||||||++|++||++||++||++|+||+++|+.|.++.+. ..++|.+ +++.|||+|||+|||+
T Consensus 169 pgSd~a~~~AAAlA~as~vf~~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~~Y~~~s~~~DEl~WAAawLy~ 248 (492)
T PLN02308 169 PGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELLWGAAWLHK 248 (492)
T ss_pred CcchHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCcccCCCcCCCCcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876543 3467865 7899999999999999
Q ss_pred HcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCccc
Q 043219 246 ATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNV 325 (591)
Q Consensus 246 aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 325 (591)
||||++|+++++.+...++... ...+|+||+|.+|+++|++++.+.++ +..++.|++.+|.++|.++.+.+...+
T Consensus 249 ATgd~~Yl~~~~~~~~~~~~~~-~~~~f~WD~k~~G~~~Lla~~~~~~~----~~~~~~~~~~ad~~l~~~~~~~~~~~~ 323 (492)
T PLN02308 249 ASRRREYREYIVKNEVILGAGD-TINEFGWDNKHAGINVLISKEVLMGK----AEYFQSFKQNADGFICSLLPGISHPQV 323 (492)
T ss_pred HhCCHHHHHHHHHHHHHhCCCC-CCcccccccHHHHHHHHHHHHHhcCc----hhHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 9999999999987654444322 23579999999999999988654332 245678999999999988765333458
Q ss_pred ccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCC
Q 043219 326 HLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPK 405 (591)
Q Consensus 326 ~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~ 405 (591)
++||+|+.|...||++||++|++||+++|++++..+.+.+.|+.......+|++||++|||||||+||+++|||||||+|
T Consensus 324 ~~TpgGl~~~~~~snlrya~naafLa~~ya~~l~~~~~~~~cg~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n 403 (492)
T PLN02308 324 QYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSR 403 (492)
T ss_pred eeCCCeeEEeCCCchHHHHHHHHHHHHHHHHHHhhcCCccccCCCccCHHHHHHHHHhccceeccCCCCCCceEeccCCC
Confidence 99999999998999999999999999999999877666788887777889999999999999999999999999999999
Q ss_pred CccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhh
Q 043219 406 YPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLF 485 (591)
Q Consensus 406 ~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~l 485 (591)
+|++||||+||||.+...+..++|.+|+. |++++.|+||+|.||||||||.+|+|.|+|.+|++||||||||||||++|
T Consensus 404 ~P~~pHHR~as~p~~~~~~~~~~c~~~~~-~~~~~~pnp~vL~GAlVGGPd~~d~y~D~r~~y~~nEva~dyNA~~vg~l 482 (492)
T PLN02308 404 FPQRIHHRGSSLPSVAAHPARIGCKEGSR-YFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLL 482 (492)
T ss_pred CCCchhhcCCCCCCcccCccccCCCCCcc-ccCCCCCCcceeeceeecCCCCCCCCCccccccccCceeeehhhHHHHHH
Confidence 99999999999998877777889998875 89999999999999999999999999999999999999999999999999
Q ss_pred hhhcc
Q 043219 486 SKLQG 490 (591)
Q Consensus 486 a~l~~ 490 (591)
|+|..
T Consensus 483 a~l~~ 487 (492)
T PLN02308 483 AYFSA 487 (492)
T ss_pred HHHhc
Confidence 99984
No 10
>PLN03009 cellulase
Probab=100.00 E-value=1.6e-121 Score=994.19 Aligned_cols=486 Identities=45% Similarity=0.847 Sum_probs=441.7
Q ss_pred CCccchHHHHHHHHhhhccccchhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCc
Q 043219 1 MRSLSFCIFIFLVAFKAAADAAEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHV 80 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~ 80 (591)
+|-||+..+.|+|.-+-.+.+++++|.++|++||+||++||||++|++++++||++|++.|+.+.++||+|||||||||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~f~~~~~~Y~~al~~Sl~Fy~aQRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~ 83 (495)
T PLN03009 4 LRPLSLVFLFFLILRRPTMESNQHDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNV 83 (495)
T ss_pred cccHHHHHHHHHHHhCcccccCchhHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCcCCCCCcccccCCCcceeCCCCc
Confidence 47788888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcce
Q 043219 81 KFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREA 160 (591)
Q Consensus 81 Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~ 160 (591)
||++|+|+++++|+|+++||++.+.+ +++||||||||||+|||||||+++|+||||||++..||.+|++||+++.+|++
T Consensus 84 Ky~~p~a~s~~~L~w~~~~f~d~~~~-~~~~diLdeikw~~D~llkm~~~~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~ 162 (495)
T PLN03009 84 KFGFPMAFTTTMLAWSVIEFGDLMPS-SELRNSLVAIRWATDYLLKTVSQPNRIFVQVGDPIADHNCWERPEDMDTPRTV 162 (495)
T ss_pred eeccchHHHHHHHHHHHHHhHhhCCc-cccHHHHHHHHHHHHHHHHcccCcCeEEEEeCCCCCCcccCcChhhcCCCCeE
Confidence 99999999999999999999999974 68999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCC---cccCCCCCC-CCchHHH
Q 043219 161 FKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSI---KCAKQFYTS-SGYSDDL 236 (591)
Q Consensus 161 ~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~---~~~~g~Y~~-~~~~De~ 236 (591)
|.++.++|+|++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++. +...++|.+ +++.||+
T Consensus 163 ~~is~~~p~sd~a~~~AAalA~as~vfk~~D~~YA~~ll~~Ak~ly~~a~~~~g~y~~~~~~~~g~~~~Y~~~s~~~DE~ 242 (495)
T PLN03009 163 YAVNAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNDDIKDGVCPFYCDFDGYQDEL 242 (495)
T ss_pred EEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCccccCccccCcCCcccccHHH
Confidence 999999999999999999999999999999999999999999999999999999997653 223457865 6699999
Q ss_pred HHHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHh
Q 043219 237 LWAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACAC 316 (591)
Q Consensus 237 ~wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 316 (591)
+|||+|||++|||++|+++++.....++.. ....+|+||+|..|+++|+++..+.+. ...++.|++.||.++|.+
T Consensus 243 ~WAAawLy~aTgd~~Yl~~~~~~~~~~~~~-~~~~~~~Wd~~~~g~~~lla~~~~~~~----~~~~~~~~~~ad~~~~~~ 317 (495)
T PLN03009 243 LWGAAWLRRASGDDSYLNYIENNGETLGAN-DNINEFGWDNKHAGLNVLVSKEVLEGN----MYSLQSYKASADSFMCTL 317 (495)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHhhhhhcCC-CCCCCCCCccHHHHHHHHHHHhhhccc----hhHHHHHHHHHHHHHHHh
Confidence 999999999999999999998754434322 223469999999999998887644221 123578999999999987
Q ss_pred hccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCC
Q 043219 317 VQKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSM 396 (591)
Q Consensus 317 ~~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~ 396 (591)
..+..++++++||+|+.|...|+|++|+++++||+++|++.+...+..+.|..+..+..+|+++|++|||||||+||+++
T Consensus 318 ~~~~~~~~v~~t~~g~~~~~~~sn~~~a~~aafl~l~yA~~l~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYiLG~Np~~~ 397 (495)
T PLN03009 318 IPESSSSHVEYTPGGLIYKPGGSNLQHATTISFLLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQVDYILGDNPMGL 397 (495)
T ss_pred cccCCCCccccCCCCeEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccccCcCCHHHHHHHHHHHHHHhcCCCCCCC
Confidence 66667788999999999998999999999999999999998876666688888777889999999999999999999999
Q ss_pred ceEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCccccc
Q 043219 397 SYLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLT 476 (591)
Q Consensus 397 SyV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId 476 (591)
|||||||+|+|++||||.+++|.+...|..+.|.+|+. |++.+.|+|++|+|+||||||..|+|+|+|++|++||||||
T Consensus 398 SYVvGyG~~~p~~pHHR~as~~~~~~~~~~~~c~~g~~-~~~~~~p~p~vl~GaLVGGP~~~d~y~D~r~~y~~NEvaid 476 (495)
T PLN03009 398 SYMVGYSERYPQRIHHRGSSLPSIKDHPEAIACKEGSV-YFNSSNPNPNVLVGAVVGGPGEDDSYEDDRDDFRKSEPTTY 476 (495)
T ss_pred ceEecCCCCCcCchhhccccCCccccccccccCccCcc-ccCCCCCCCCcccceEeeCCCCCCCCCcccccccccchhhh
Confidence 99999999999999999999998777777899999986 89999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhccCCC
Q 043219 477 ACAPLVGLFSKLQGSSK 493 (591)
Q Consensus 477 ~NA~lv~~la~l~~~~~ 493 (591)
||||||++||+|...++
T Consensus 477 yNA~lv~~lA~l~~~~~ 493 (495)
T PLN03009 477 INAPFVGVLAYFAANPG 493 (495)
T ss_pred hhHHHHHHHHHHhcCCC
Confidence 99999999999997544
No 11
>PLN02345 endoglucanase
Probab=100.00 E-value=2.4e-120 Score=974.97 Aligned_cols=457 Identities=49% Similarity=0.857 Sum_probs=416.3
Q ss_pred HHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHhHHHHHhcc
Q 043219 29 ALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRKEITELN 108 (591)
Q Consensus 29 ~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~ 108 (591)
+|++||+||++||||++ +.++++||++||+.||.+.++||+|||||||||+||++|+|+++++|+|+++||++.|++.+
T Consensus 1 aL~~sl~Fy~aQrsG~l-~~~~~~Wrgds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~t~L~w~~~e~~~~~~~~~ 79 (469)
T PLN02345 1 ALKIALQFFDIQKSGKL-ENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAAN 79 (469)
T ss_pred CHHHHHHHHHHhcCCCC-ccCCCCccccccccccccccCcCCCCceeCCCCceeCchhHHHHHHHHHHHHHhhhhhhccc
Confidence 58999999999999999 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 109 QMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
++|||||||||++|||||||+++|+||+|||++..||.+|++||+++.+|++|.+++++|||++++++|||||+||||||
T Consensus 80 ~~~~~ldelkw~~Dyllk~~~~~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~~~~~~pgsd~a~~~AAAlA~as~vfk 159 (469)
T PLN02345 80 QLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFK 159 (469)
T ss_pred chHHHHHHHhHHHHHHHHhcCCCCeEEEEecCCCCCcccCCChhhcCCcceEEecCCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHh-hhhcCCCC
Q 043219 189 PYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDN-AEYMGGTG 267 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~-~~~~~~~~ 267 (591)
++||+||++||++||++|+||+++|+.|..+++...+||+++++.||++|||+|||+||||++|+++++.. ...+....
T Consensus 160 ~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~Y~s~~~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~ 239 (469)
T PLN02345 160 SSDSTYSDTLLKHAKQLFNFADKYRGSYSESIPEVQDYYNSTGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFADWG 239 (469)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCccCCCCCCcccccHHHHHHHHHHHHhCCHHHHHHHHhhhhhhhcccC
Confidence 99999999999999999999999999998776666789999999999999999999999999999998532 22222111
Q ss_pred CCcccccccchhHHHHHHHHHHhhcCCC---chhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceeccccchHHHH
Q 043219 268 WAVKEFSWDNKYAGVQILLSKVLMEGRG---GAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYVREWNNMQYA 344 (591)
Q Consensus 268 ~~~~~~~Wd~~~~g~~~l~a~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~~~Wgs~~~~ 344 (591)
. ...|+||+|.+|+++||++++..++. ...+..+..|++.++.++|.++.+.....+.+||+||+|+..||++||+
T Consensus 240 ~-~~~~~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGl~~~~~wgslrya 318 (469)
T PLN02345 240 S-PTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTATTSRTDGGLIWVSEWNALQHA 318 (469)
T ss_pred C-CceecCcchHHHHHHHHHHHhhccCccccchhhHHHHHHHHHHHHHHHHhcCCCCCccccccCCeeEEeCCCchHHHH
Confidence 1 23589999999999999998754332 1234567899999999999988764444678999999999999999999
Q ss_pred HHHHHHHHHHHhhHHhh-hcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcccccccC
Q 043219 345 SAAAFLLSVYYDYLSAA-NAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYNL 423 (591)
Q Consensus 345 ~n~a~l~~~~~~~~~~~-~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~ 423 (591)
++++||+++|++++... ++.+.|.....+..+|++||++|||||||+||+++|||||||.|+|++||||+||||.
T Consensus 319 ~~~afla~vya~~l~~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~---- 394 (469)
T PLN02345 319 VNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPA---- 394 (469)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCcceEeecCCCCCCCcccccCCCCC----
Confidence 99999999999987544 3567887777788999999999999999999999999999999999999999999975
Q ss_pred CCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCC
Q 043219 424 HSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSS 492 (591)
Q Consensus 424 ~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~ 492 (591)
+..++|.+|+. |++++.++||+|.||||||||.+|.|.|+|.+|++|||++++||+||++||+|....
T Consensus 395 ~~~~~c~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~y~nA~~vg~la~l~~~~ 462 (469)
T PLN02345 395 DAKTGCKDGFK-WLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTTS 462 (469)
T ss_pred CCCcCCCCCcc-cccCCCCCCceeccceecCCCccCCccccccccccccceeehhhHHHHHHHHHhcCC
Confidence 35689999985 899999999999999999999999999999999999999888899999999999643
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=7.9e-104 Score=862.22 Aligned_cols=435 Identities=42% Similarity=0.722 Sum_probs=360.4
Q ss_pred hHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCC-------CccccccceecCCCCcccccchHHHHHHHHHHH
Q 043219 25 NYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSL-------QGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGT 97 (591)
Q Consensus 25 ~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~-------~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~ 97 (591)
+|.++|++||+||++||||++|+.++++||+++|+.|+.. ..+||+|||||||||+||++|+++++++|+|++
T Consensus 1 ~Y~~~l~~sl~f~~~QR~G~~~~~~~~~w~~~s~~~d~~~~~~~~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~ 80 (444)
T PF00759_consen 1 NYKEALKKSLRFYYAQRSGTLPEDYAIPWRRDSCHTDGADSGPNNSGTTIDLSGGWYDAGDYGKYTFPMAYSVTMLAWSA 80 (444)
T ss_dssp -HHHHHHHHHHHHHHTBSBSTTTTTSGTTEB-BSTTTTCTCTSTTTSCEEB---SB-SSSSS-EEHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCcCCCcccccccCCcccCCCccccccccccccccccCceeecCCcceecccHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999887654 356999999999999999999999999999999
Q ss_pred HHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHH
Q 043219 98 IEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETA 177 (591)
Q Consensus 98 ~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~A 177 (591)
+|+.+.+|++|++||||||||||+|||||||+++|.||+||||+..||..|.+||.++.+|+.+.+...+|+|++++++|
T Consensus 81 ~e~~~~~e~~~~~~dllde~kwg~D~llkm~~~~~~~~~qvgdg~~~h~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~A 160 (444)
T PF00759_consen 81 YEFFPAYESGNGIPDLLDEAKWGLDWLLKMQDSDGTFYAQVGDGGVDHKVWGRPEIMPDDDPSYRYDAPNPGTDATAEFA 160 (444)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHHHTBSCTTEEEEEESTHHHHHTEESTGGGTGSGESEEEEETTB-EHHHHHHHH
T ss_pred HHhHHHhhcCCcHHHHHHHHHHHHHHHHhccCCCCceeeeccCccchhhcccCCCCCCCCCCcceEecCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899988777788999999999
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHH
Q 043219 178 AALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSI-KCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYV 256 (591)
Q Consensus 178 AalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~-~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~ 256 (591)
||||+||||||++||+||++||++||++|+||++||+.|.+.. +...++|+++++.||++|||+|||++|||++|++++
T Consensus 161 AalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~~~~~De~~wAA~~Ly~aTg~~~Y~~~a 240 (444)
T PF00759_consen 161 AALAAASRVFKDFDPAYAAQCLKAAKEAYAFAKKNPGVYSDNPQPNGGGFYNSSGYEDELAWAAAELYRATGDESYLDYA 240 (444)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSTTHGGGTSTCTTTTTSHCS-SHHHHHHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCcccccCCcccCCCcccHHHHHHHHHHHhcCcHHHHHHH
Confidence 9999999999999999999999999999999999999876654 567889999999999999999999999999999999
Q ss_pred HHhhhhcCCCCCCc-ccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceec
Q 043219 257 VDNAEYMGGTGWAV-KEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYV 335 (591)
Q Consensus 257 ~~~~~~~~~~~~~~-~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~ 335 (591)
+++...+....+.. ..++|+++..+++++++......+ ....+++++++.++.+++..... ....+.++|+|+.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~la~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 317 (444)
T PF00759_consen 241 KEYYDDLEASQWSNEWSFSWDNKAAGAQLLLAKLTNDDP--SRDAAREQYKSAADKFLNKWLND-GYGSVPYTPGGLAWI 317 (444)
T ss_dssp HHHCCTSSBSTTSSSSSSCTTBSHHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHHHHHS-TTTBSEBCTTSSBES
T ss_pred HHhHHhhcccccccccccchhhhhhhhhHHHHhcccchh--hhHHHHHHHHHHHHHHHHHHhhc-cCCCcccCccccccc
Confidence 98775443222222 368999999999998887743222 12336678888888888776543 223467899999999
Q ss_pred cccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccC
Q 043219 336 REWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGS 415 (591)
Q Consensus 336 ~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s 415 (591)
..||+++++.+.+||+++|.++. ..++.+|+++|++|||||||+||+++|||||+|+|+|++||||.+
T Consensus 318 ~~WGs~~~~~~~a~l~~~~~~~~------------~~~~~~y~~~a~~qldyiLG~Np~~~SyV~G~G~~~p~~pHHr~~ 385 (444)
T PF00759_consen 318 YEWGSNRYAANAAFLALAYAKYD------------LTGDQEYRDFAQSQLDYILGRNPFGQSYVTGYGENSPQHPHHRAS 385 (444)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHTC------------HCHHHHHHHHHHHHHHHHHTTSTT--BSBTTSSSSBBSS-B-HHC
T ss_pred cCCCccHHHHHHHHHHHHHHhcc------------cCChHHHHHHHHHHhhhhcCcCCCCceeeecCCCCCCCCCcCchh
Confidence 99999999999999999988541 034788999999999999999999999999999999999999997
Q ss_pred cccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhh
Q 043219 416 SMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFS 486 (591)
Q Consensus 416 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la 486 (591)
+.. | ++.++...+.|++++|+|+||||||..++|+|+|.+|++||||||||||||++||
T Consensus 386 s~~----------~--~~~~~~~~~~pn~~~l~GalvGGP~~~~~y~D~~~~~~~nEvaid~NA~l~~~lA 444 (444)
T PF00759_consen 386 SAH----------C--SWDDGINSPPPNPHVLYGALVGGPNSADSYVDDRSSYSTNEVAIDYNAPLVGALA 444 (444)
T ss_dssp HHH----------T--CCSSTSTSSSS-SS--TT-BBS-SSTTS----STT-TTTHBBBHHHHHHHHHHHH
T ss_pred hcc----------c--cccccCCCCCCCccCccccccCCCCccCCccCCCcccccchHHHHHHHHHHHHhC
Confidence 610 1 1223456678899999999999999999999999999999999999999999997
No 13
>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This domain is found at the C-terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose []. ; GO: 0030246 carbohydrate binding, 0005576 extracellular region
Probab=99.65 E-value=5.4e-16 Score=129.06 Aligned_cols=79 Identities=37% Similarity=0.760 Sum_probs=72.2
Q ss_pred eeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEe
Q 043219 499 VEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQ 578 (591)
Q Consensus 499 ~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~ 578 (591)
++++|+++++|.+++.+|+|++|+|+|+|..+|++.+|..+....++||++. .+++.+++|+|...|+||++++||||.
T Consensus 1 i~i~q~~~~sW~~~g~~y~qy~v~I~N~~~~~I~~~~i~~~~l~~~iW~l~~-~~~~~y~lPs~~~~i~pg~s~~FGYI~ 79 (80)
T PF09478_consen 1 ITITQTLVNSWTENGQTYTQYDVTITNNGSKPIKSLKISIDNLYGSIWGLDK-VSGNTYTLPSYQPTIKPGQSFTFGYIS 79 (80)
T ss_pred CEEEEEEEeEEEeCCEEEEEEEEEEEECCCCeEEEEEEEECccchhheeEEe-ccCCEEECCccccccCCCCEEEEEEEe
Confidence 5799999999999999999999999999999999999999833499999955 366789999999999999999999996
No 14
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....
Probab=99.64 E-value=1.6e-16 Score=138.34 Aligned_cols=79 Identities=22% Similarity=0.484 Sum_probs=74.1
Q ss_pred eeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCCCCeE
Q 043219 499 VEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKPGSQC 572 (591)
Q Consensus 499 ~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~G~s~ 572 (591)
|+++++++++|++| |+++|+|+|+++.+|++|+|+|+++ +.++||++.+++|+ ++++++||+.|+||++.
T Consensus 1 ctv~~~v~~~W~~G----f~~~v~v~N~~~~~i~~W~v~~~~~~~~~i~~~Wna~~s~~g~~~~v~~~~wn~~i~~G~s~ 76 (101)
T PF00553_consen 1 CTVTYTVTNSWGGG----FQGEVTVTNNGSSPINGWTVTFTFPSGQTITSSWNATVSQSGNTVTVTNPSWNGTIAPGGSV 76 (101)
T ss_dssp EEEEEEEEEESSSE----EEEEEEEEESSSSTEESEEEEEEESTTEEEEEEESCEEEEETTEEEEEESSTCSEEEESEEE
T ss_pred CEEEEEEecccCCC----eEEEEEEEECCCCccCCEEEEEEeCCCCEEeeeeccEEEecCCEEEEEcCCcCcccCCCCeE
Confidence 89999999999999 9999999999999999999999988 78999999888774 48899999999999999
Q ss_pred EEEEEecCC
Q 043219 573 TFVYVQGGP 581 (591)
Q Consensus 573 ~fG~i~~~~ 581 (591)
+|||++.++
T Consensus 77 ~~Gf~~~~~ 85 (101)
T PF00553_consen 77 TFGFQASGS 85 (101)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEeCC
Confidence 999998875
No 15
>smart00637 CBD_II CBD_II domain.
Probab=99.36 E-value=2.1e-12 Score=110.49 Aligned_cols=72 Identities=21% Similarity=0.456 Sum_probs=64.7
Q ss_pred cccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCCCCeEEEEEEe-
Q 043219 506 ASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKPGSQCTFVYVQ- 578 (591)
Q Consensus 506 ~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~G~s~~fG~i~- 578 (591)
.++|.+| |+++|+|+|+++.+|++|+|+++++ ++++||+++++.|. +++.++||+.|+||++.+|||+.
T Consensus 1 ~~~W~~G----~~~~v~vtN~~~~~~~~W~v~~~~~~~~~i~~~Wn~~~~~~g~~~~~~~~~wn~~i~~G~s~~~gf~~~ 76 (92)
T smart00637 1 TSDWGSG----FTANVTVTNTGSSAINGWTVTFDLPGGQTVTNSWNATVSQSGGHVTATNASWNGTIAPGGSVSFGFQGK 76 (92)
T ss_pred CCcCCCC----EEEEEEEEeCCCCcccCeEEEEEcCCCcEEeeeEEEEEEecCCEEEEecCccccccCCCCEEEEEEEec
Confidence 3789999 9999999999999999999999976 78999999877764 58888999999999999999999
Q ss_pred cCC
Q 043219 579 GGP 581 (591)
Q Consensus 579 ~~~ 581 (591)
.|+
T Consensus 77 ~G~ 79 (92)
T smart00637 77 TGS 79 (92)
T ss_pred CCC
Confidence 653
No 16
>COG5297 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase A) [Carbohydrate transport and metabolism]
Probab=98.35 E-value=8.6e-07 Score=90.67 Aligned_cols=80 Identities=20% Similarity=0.363 Sum_probs=70.2
Q ss_pred CCCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC--CCCcccceeecCCce--eecCCCcCCCCCCC
Q 043219 495 SENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL--SGSLWGLSPTSENRT--YQLPPWLKVLKPGS 570 (591)
Q Consensus 495 ~~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~--~~~~Wn~~~~~~g~~--~~~psw~~~i~~G~ 570 (591)
|.+.++.+.++.++|..| |+-+|.|+|+++++ +.|++++..- |+.+|+++++++|.+ ..--.||.+|+|.+
T Consensus 460 p~~ni~~~i~~~~~w~~g----~cerv~vtnt~ss~-s~w~~t~~~kg~iq~lw~a~ws~~gd~l~asg~d~nktl~png 534 (544)
T COG5297 460 PTKNITSSITVDSDWHTG----YCERVKVTNTGSSR-SSWTVTIPLKGTIQTLWSATWSLSGDKLIASGLDWNKTLEPNG 534 (544)
T ss_pred CccCceeEEEeccccccc----ceeEEEeeccCCCC-cceEEEEeeccchhhhhhccccccCCeeeeeccccccccCCCC
Confidence 355688888999999999 99999999999765 8999998865 899999999999854 66789999999999
Q ss_pred eEEEEEEec
Q 043219 571 QCTFVYVQG 579 (591)
Q Consensus 571 s~~fG~i~~ 579 (591)
+.+|||+..
T Consensus 535 ~~efgfc~~ 543 (544)
T COG5297 535 TTEFGFCAN 543 (544)
T ss_pred cceeecccc
Confidence 999999864
No 17
>PF06483 ChiC: Chitinase C; InterPro: IPR009470 This ~170 aa region is found at the C-terminal to the catalytic domain (IPR001223 from INTERPRO) found in members of glycoside hydrolase family 18.
Probab=97.71 E-value=0.00018 Score=67.52 Aligned_cols=92 Identities=22% Similarity=0.398 Sum_probs=69.3
Q ss_pred CCCCeeEEeeccccccCCCceE-EEEEEEEEeCCCCCC-cceEEEEecC--------CCCcccceeecCC----------
Q 043219 495 SENPVEFLHSIASTWNVGETTY-YKHKVIIKNTSQKPI-TDLKLTIENL--------SGSLWGLSPTSEN---------- 554 (591)
Q Consensus 495 ~~~~~~~~~~~~~~W~~g~~~~-~~~~vti~N~g~~~i-~~w~~~~~~~--------~~~~Wn~~~~~~g---------- 554 (591)
|...+-|+..+ ..|.-|..+| .+-+++|||++.+.| -+++|+|+.| -++.|++++..+|
T Consensus 32 P~~~ldv~v~~-~gf~~GD~NYPI~Pkl~iTNns~~~iPGGt~~~FD~ptSa~~~~kdqSG~g~~vi~sght~~g~NiGG 110 (180)
T PF06483_consen 32 PTEALDVSVSF-TGFKLGDSNYPINPKLTITNNSGQTIPGGTEFEFDYPTSAPDNAKDQSGFGLKVISSGHTAAGNNIGG 110 (180)
T ss_pred CCceEEEEEEe-CCcccCCCCCCcCCcEEEEcCCCcccCCccEEEEccccCCccccccccCCcEEEEecCCcccCCcccc
Confidence 56667777765 5577775555 478999999999999 6999999988 2466777754332
Q ss_pred -------ceeecCCCcCCCCCCCeEEEEEEec---CCCceeeee
Q 043219 555 -------RTYQLPPWLKVLKPGSQCTFVYVQG---GPQAKVSVL 588 (591)
Q Consensus 555 -------~~~~~psw~~~i~~G~s~~fG~i~~---~~~a~~~v~ 588 (591)
+.+++|+|+. |+||+|+++-++-- +.|+|++|.
T Consensus 111 L~gdfHrvs~tlp~wqs-lapG~s~~~~~~YyLPiSgPsN~tv~ 153 (180)
T PF06483_consen 111 LKGDFHRVSFTLPAWQS-LAPGASVELDMVYYLPISGPSNFTVN 153 (180)
T ss_pred cCCceEEEEEECCCccc-cCCCCEEEEeEEEEeccCCCceEEEE
Confidence 1399999975 99999999887622 229998885
No 18
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=97.24 E-value=0.014 Score=62.58 Aligned_cols=148 Identities=19% Similarity=0.045 Sum_probs=95.2
Q ss_pred CCcccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc-cCC-CeEEEEeCCCCCCCCCCCCCCCCC
Q 043219 78 DHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH-TQP-NVLWAQVGDGDSDHYCWERAEDMT 155 (591)
Q Consensus 78 D~~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~-~~~-g~~y~qVgd~~~dh~~W~~Pe~~~ 155 (591)
|..|++.-+|+.++.|+.++..+ +.++.|+.++-+++||++-. +.+ |++++.+.. | +.|.+.
T Consensus 47 ~~~k~~~~~ar~i~~~a~a~~~~--------~~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~~---~----g~~~~~- 110 (384)
T cd00249 47 DTDRRLWLQARQVYCFAVAYLLG--------WRPEWLEAAEHGLEYLDRHGRDPDHGGWYFALDQ---D----GRPVDA- 110 (384)
T ss_pred CCCCeEEEecHHHHHHHHHHHhc--------CChhHHHHHHHHHHHHHHhCcCCCCCCEEEEEcC---C----CCCccc-
Confidence 45799999999999998775432 56889999999999999954 445 888887731 1 112111
Q ss_pred CCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC----C-CCCCCCcccCCCCCCC
Q 043219 156 TPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFR----G-LYDDSIKCAKQFYTSS 230 (591)
Q Consensus 156 ~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~----~-~y~~~~~~~~g~Y~~~ 230 (591)
+ +....-+-++.|||.++++..+ + ++|+.|++++++..++- + .+....+. ...+...
T Consensus 111 --~---------~~l~~~a~~l~ala~~~~at~d--~----~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~ 172 (384)
T cd00249 111 --T---------KDLYSHAFALLAAAQAAKVGGD--P----EARALAEETIDLLERRFWEDHPGAFDEADPG-TPPYRGS 172 (384)
T ss_pred --c---------cchHHHHHHHHHHHHHHHhcCC--H----HHHHHHHHHHHHHHHHhccCCCcccCCCCCC-CCCCCCC
Confidence 1 1122345677788888888743 3 56677777777776641 2 22111110 1122222
Q ss_pred CchHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 231 GYSDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 231 ~~~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
+...-++.|..+|+.+|+++.|++.+++.
T Consensus 173 ~~~~h~~~all~l~~~tgd~~~~~~A~~l 201 (384)
T cd00249 173 NPHMHLLEAMLAAYEATGEQKYLDRADEI 201 (384)
T ss_pred ChhHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 22334467899999999999999987653
No 19
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms]
Probab=94.47 E-value=0.53 Score=48.61 Aligned_cols=112 Identities=21% Similarity=0.219 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCC
Q 043219 111 GHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPY 190 (591)
Q Consensus 111 pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~ 190 (591)
|.++..||=.+|||++-+..+|- +...+....+|-|.... ..|| +|-.||.|+.||+
T Consensus 241 ~~~~~dVK~sldym~~~rfpsGN--------------yP~s~~~~~drLVhWcH-GApG------v~~~L~kAy~VF~-- 297 (403)
T KOG2787|consen 241 PALLKDVKGSLDYMIQNRFPSGN--------------YPSSEGNKRDRLVHWCH-GAPG------VAYTLAKAYQVFK-- 297 (403)
T ss_pred hhHHHhhhhHHHHHHHccCCCCC--------------CCcccCCCcceeeeecc-CCch------HHHHHHHHHHHhh--
Confidence 44788899999999998633331 11124445567665432 1233 7788999999998
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 191 NSSYSELLLLHAKQLFSFADRFR--GLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 191 D~~yA~~~L~~A~~ay~~a~~~~--~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
..+|-+...++|+-.|+...-.+ |..+- .++..| +=.-|||+|+|.+|+-.+++.
T Consensus 298 Eekyl~aa~ecadvVW~rGlLkkg~GichG---vaGNaY-----------vFLsLyRLT~d~kYlyRA~kF 354 (403)
T KOG2787|consen 298 EEKYLEAAMECADVVWKRGLLKKGVGICHG---VAGNAY-----------VFLSLYRLTGDMKYLYRAKKF 354 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCccccc---ccCchh-----------hhHhHHHHcCcHHHHHHHHHH
Confidence 47899999999999999776554 44332 123223 345699999999999887653
No 20
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=94.44 E-value=0.63 Score=50.05 Aligned_cols=127 Identities=21% Similarity=0.267 Sum_probs=64.5
Q ss_pred cchHHHHHHHHHHHHHhhhhccCC---CeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHH
Q 043219 108 NQMGHALWAIRWGTDYFMKAHTQP---NVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASA 184 (591)
Q Consensus 108 ~~~pdiLdE~kwglDwllkm~~~~---g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As 184 (591)
...|..|+.++--.+++++-.++. |+++=++.+ .+ .-.-|+ +..| .+.+ +.+++
T Consensus 109 ~~~~~yL~~A~~i~~~~~~~wd~~~cgGGi~W~~~~-----------~~---~~~~~K----na~s--N~~~---~~laa 165 (370)
T PF03663_consen 109 SDNPKYLDLAKEIFDFLISGWDDTSCGGGIWWSIDD-----------TN---SGYDYK----NAIS--NGPA---AQLAA 165 (370)
T ss_dssp ----HHHHHHHHHHHHHHHTB-SGG-GS-BEEET------------------TEEEEE----EHHH--HHHH---HHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhcCCccCCCCccccccc-----------cC---CCCCcc----cccc--hHHH---HHHHH
Confidence 455699999999999999666443 555444321 00 112243 1222 2333 33344
Q ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHh----cC--CCCCCCCcccC--CCCCCCCc---hHHHHHHHHHHHHHcCch-HH
Q 043219 185 IAFKPYNSSYSELLLLHAKQLFSFADR----FR--GLYDDSIKCAK--QFYTSSGY---SDDLLWAATWLYRATNEE-YY 252 (591)
Q Consensus 185 ~vfk~~D~~yA~~~L~~A~~ay~~a~~----~~--~~y~~~~~~~~--g~Y~~~~~---~De~~wAAaeLy~aTgd~-~Y 252 (591)
|+++-.+.+ ++|+.|+++|+|..+ .+ +.+.|.+.... .......+ .--++-|+++||++|+++ +|
T Consensus 166 rL~~~t~~~---~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~~~~~~TYNqG~~l~a~~~Ly~~T~~~~~y 242 (370)
T PF03663_consen 166 RLYRITGDQ---TYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNINKTKWTYNQGVFLGAAAYLYNATNDEQTY 242 (370)
T ss_dssp HHHHHH--H---HHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-TT---HHHHHHHHHHHHHHHHHH--H-HH
T ss_pred HHHHhcCCh---HHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcCCCceechHHHHHHHHHHHHHHhcCCccHH
Confidence 555444333 699999999999998 23 33433321111 01111112 124577999999999766 99
Q ss_pred HHHHHHhh
Q 043219 253 LKYVVDNA 260 (591)
Q Consensus 253 l~~~~~~~ 260 (591)
++.+.+..
T Consensus 243 l~~A~~la 250 (370)
T PF03663_consen 243 LDRAEKLA 250 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887643
No 21
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=93.84 E-value=0.85 Score=48.79 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=73.9
Q ss_pred HHHHHHHhhh-hc-cCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Q 043219 117 IRWGTDYFMK-AH-TQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSY 194 (591)
Q Consensus 117 ~kwglDwllk-m~-~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~y 194 (591)
.+-.++|.+. +. ++.|+++..+.. | +.|.+ + .|.++. .+.+.-++|.+++++.+
T Consensus 16 ~~~~~~fw~~~~~d~~~gg~~~~l~~---~----g~~~~-~-~k~~~~----------~ar~i~~~a~a~~~~~~----- 71 (384)
T cd00249 16 LEDLLPFWLEAGLDREAGGFFECLDR---D----GQPFD-T-DRRLWL----------QARQVYCFAVAYLLGWR----- 71 (384)
T ss_pred HHHHHHHHHhcCCCCCCCCeEEEECC---C----CCCCC-C-CCeEEE----------ecHHHHHHHHHHHhcCC-----
Confidence 3456666666 43 456889998853 2 23442 2 344554 25788899999999854
Q ss_pred HHHHHHHHHHHHHHHHhcC-----CCCCCCCcccCCCC-CCCCchH--HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 195 SELLLLHAKQLFSFADRFR-----GLYDDSIKCAKQFY-TSSGYSD--DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 195 A~~~L~~A~~ay~~a~~~~-----~~y~~~~~~~~g~Y-~~~~~~D--e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
.++|+.|+++++|..++- |.|....+..+... ......| -+++|.++||++|+++.|++.+++.
T Consensus 72 -~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~~~g~~~~~~~~l~~~a~~l~ala~~~~at~d~~~l~~A~~~ 143 (384)
T cd00249 72 -PEWLEAAEHGLEYLDRHGRDPDHGGWYFALDQDGRPVDATKDLYSHAFALLAAAQAAKVGGDPEARALAEET 143 (384)
T ss_pred -hhHHHHHHHHHHHHHHhCcCCCCCCEEEEEcCCCCCcccccchHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 347889999999998862 32211111001111 1111223 3478999999999999999988764
No 22
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=93.78 E-value=0.26 Score=55.90 Aligned_cols=81 Identities=22% Similarity=0.125 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC--CC----CCCCCcccCCCC-CCCCchHHHHHHHHH
Q 043219 170 SDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFR--GL----YDDSIKCAKQFY-TSSGYSDDLLWAATW 242 (591)
Q Consensus 170 s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~--~~----y~~~~~~~~g~Y-~~~~~~De~~wAAae 242 (591)
|+-.+.+++|||.|+|++.+ .++++.|+++-+|..++- +. +-+... -| +...+.--++||.+.
T Consensus 410 t~wNglmi~aLa~a~~~~~d------~~~l~~A~~~~~fi~~~l~~~rl~~~~~~G~a----~~~g~leDYA~~i~gll~ 479 (667)
T COG1331 410 TDWNGLMIAALAEAGRVLGD------PEYLEAAERAADFILDNLYVDRLLRRYRGGEA----AVAGLLEDYAFLILGLLA 479 (667)
T ss_pred eccHHHHHHHHHHHHHHcCC------hHHHHHHHHHHHHHHHhhcccchheeeecCcc----cccccchhHHHHHHHHHH
Confidence 44578999999999999977 467888888888886641 11 111110 11 112223467999999
Q ss_pred HHHHcCchHHHHHHHHhh
Q 043219 243 LYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 243 Ly~aTgd~~Yl~~~~~~~ 260 (591)
||.+|++.+||+.+++..
T Consensus 480 lye~t~d~~yL~~A~~L~ 497 (667)
T COG1331 480 LYEATGDLAYLEKAIELA 497 (667)
T ss_pred HHHhhCcHHHHHHHHHHH
Confidence 999999999999987654
No 23
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=92.82 E-value=1.2 Score=50.18 Aligned_cols=126 Identities=18% Similarity=0.066 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCC-CCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 110 MGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGD-SDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 110 ~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~-~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
-+.+++.+..-+|+|+++|..+|-+-....... .....|.+ + + -..|. .+.+-.+|-..++.-.
T Consensus 78 D~~l~~~~d~~V~~l~~~Q~~dGYl~~~~~~~~~~~~~~w~~-~-~---he~Y~----------~~~ll~gl~~~y~~tG 142 (520)
T PF07944_consen 78 DPELKAKADEIVDELAAAQQPDGYLGTYPEERNFNPDDRWAP-D-M---HELYC----------LGKLLEGLIDYYEATG 142 (520)
T ss_pred CHHHHHHHHHHHHHHHHhccCCceecccccccccccccCCCC-C-c---cceeh----------HhHHHHHHHHHHHHHC
Confidence 467889999999999999988774322111100 00123433 1 1 11333 2344455555555433
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhh
Q 043219 189 PYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~ 260 (591)
+ +++|+.|+++-+|....-..+.+.. .....+. + .-++..+-++||+.|||++||+.++...
T Consensus 143 ~------~~~L~v~~k~ad~~~~~~~~~~~~~-~~~~~~~--~-~~~i~~~l~~LY~~Tgd~~yL~lA~~f~ 204 (520)
T PF07944_consen 143 N------ERALDVATKLADWVYRRLSRLGPEP-GQKMGYP--E-HGGINEALVRLYEITGDERYLDLAEYFV 204 (520)
T ss_pred c------HHHHHHHHHHHHHHHHHhccCCHHH-hhccccc--c-cchHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3 5889999998888833211111110 0000111 1 1356689999999999999999887644
No 24
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known. It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.
Probab=92.06 E-value=0.41 Score=39.27 Aligned_cols=55 Identities=20% Similarity=0.404 Sum_probs=34.2
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEecC
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQGG 580 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~~ 580 (591)
-....++|+|.|..++.+.++.++.| +-|.+ ..++. +.+ .|+||++.++-|.++-
T Consensus 6 ~~~~~~tv~N~g~~~~~~v~~~l~~P--~GW~~--~~~~~--~~~----~l~pG~s~~~~~~V~v 60 (78)
T PF10633_consen 6 TVTVTLTVTNTGTAPLTNVSLSLSLP--EGWTV--SASPA--SVP----SLPPGESVTVTFTVTV 60 (78)
T ss_dssp EEEEEEEEE--SSS-BSS-EEEEE----TTSE-----EEE--EE------B-TTSEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCceeeEEEEEeCC--CCccc--cCCcc--ccc----cCCCCCEEEEEEEEEC
Confidence 36788999999999999999999988 88974 22222 222 6999999988887654
No 25
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=90.72 E-value=1.1 Score=47.41 Aligned_cols=140 Identities=24% Similarity=0.218 Sum_probs=78.8
Q ss_pred ccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc--cCCCeEEEEeCCCCCCCCCCCCCCCCCCCc
Q 043219 81 KFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH--TQPNVLWAQVGDGDSDHYCWERAEDMTTPR 158 (591)
Q Consensus 81 Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~--~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R 158 (591)
|++.-++=-+++++.++ . - +.|+.|+-++.+++||.+.. ++.|++|+.+-++ + |.+. .+
T Consensus 18 k~~~~q~R~~~~fa~a~-------~-~-g~~~~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~~-------~-~~~~--~~ 78 (346)
T PF07221_consen 18 KRLWVQARQLYTFARAY-------R-L-GRPEYLELAEHGFDFLRKHFRDPEYGGWYRSLDDG-------G-PLDP--QK 78 (346)
T ss_dssp EEHHHHHHHHHHHHHHH-------H-T-TSHHHHHHHHHHHHHHHHTTBTTTTSSBSSEEETT-------E-EEE----E
T ss_pred ceeeeeHHHHHHHHHHH-------h-c-CchhHHHHHHHHHHHHHHhcccCCCCCEEEEeCCC-------C-CCcc--cc
Confidence 46555555555555443 2 1 48889999999999999885 4557777766321 1 2110 11
Q ss_pred ceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCCcccCCCCCC-CCc
Q 043219 159 EAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRF---R--GLYDDSIKCAKQFYTS-SGY 232 (591)
Q Consensus 159 ~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~---~--~~y~~~~~~~~g~Y~~-~~~ 232 (591)
..| .++-+.+|.|. ...--++ +.++.|++++++.+++ | +.|....+.. ... ...
T Consensus 79 ~~Y------------~~af~l~ala~-~~~tg~~----~~~~~A~~~~~~l~~~~~d~~~g~~~~~~~~~---~~~~r~~ 138 (346)
T PF07221_consen 79 DLY------------DQAFALLALAE-ARATGDP----EALELAEQTLEFLERRFWDPEGGGYRESFDPD---WSPPRGQ 138 (346)
T ss_dssp EHH------------HHHHHHHHHHH-HHCTT-T----THHHHHHHHHHHHHHHTEETTTTEE--EETTT---SSCBEEH
T ss_pred chH------------HHHHHHHHHHH-HHHhCCh----hHHHHHHHHHHHHHHHhcccccCcceeccCCc---cccCCCC
Confidence 222 22333444444 2222344 4477888888888775 2 2232211000 000 012
Q ss_pred hH--HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 233 SD--DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 233 ~D--e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
.+ -++-|.+.|+++|++..|++.+++.
T Consensus 139 n~~mhl~eA~l~l~~~~~~~~~~~~a~~l 167 (346)
T PF07221_consen 139 NPHMHLLEAFLALYEATGDPRYLDRAEEL 167 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 34 3466889999999999999988764
No 26
>PF03173 CHB_HEX: Putative carbohydrate binding domain; InterPro: IPR004866 This domain represents the N-terminal domain in chitobiases and beta-hexosaminidases 3.2.1.52 from EC. Chitobiases degrade chitin, which forms the exoskeleton in insects and crustaceans, and which is one of the most abundant polysaccharides on earth []. Beta-hexosaminidases are composed of either a HexA/HexB heterodimer or a HexB homodimer, and can hydrolyse diverse substrates, including GM(2)-gangliosides; mutations in this enzyme are associated with Tay-Sachs disease []. HexB is structurally similar to chitobiase, consisting of a beta sandwich structure; this structure is similar to that found in the cellulose-binding domain of cellulase from Cellulomonas fimi (IPR001919 from INTERPRO), suggesting that it may function as a carbohydrate-binding domain.; GO: 0030246 carbohydrate binding; PDB: 1C7T_A 1QBA_A 1QBB_A 1C7S_A.
Probab=86.47 E-value=2.6 Score=39.92 Aligned_cols=79 Identities=14% Similarity=0.234 Sum_probs=40.1
Q ss_pred ccccCCCceEEEEEEEEEeCCCCCCc--ceEEEEecC--CCCccc--ceee-cCCc--eeecCCCcCCCCCCCeEEEEEE
Q 043219 507 STWNVGETTYYKHKVIIKNTSQKPIT--DLKLTIENL--SGSLWG--LSPT-SENR--TYQLPPWLKVLKPGSQCTFVYV 577 (591)
Q Consensus 507 ~~W~~g~~~~~~~~vti~N~g~~~i~--~w~~~~~~~--~~~~Wn--~~~~-~~g~--~~~~psw~~~i~~G~s~~fG~i 577 (591)
..|... |.++++++|.|..++. +|+|-|... |.+.=+ ...+ .+|. .+++-.=-..|+||+|.++=|+
T Consensus 26 ~~~~~c----~~~~ltl~n~~~~~~~~~dW~IYf~~ir~i~~~~s~~f~i~hinGDl~kl~Pt~~F~gl~~Ges~~I~~~ 101 (164)
T PF03173_consen 26 ADWASC----FRAELTLTNPGDAPLPKSDWAIYFSSIRPILQVDSDQFKITHINGDLHKLTPTAGFKGLAPGESLEIPFV 101 (164)
T ss_dssp -GGG-E----EEEEEEEEE-SS-B------EEEEE-SS-EEEESSTTEEEEE-STTEEEEEE-TT---B-TTEEEEEEEE
T ss_pred CCcccc----eEEEEEEEcCCCccCCCCCeEEEEecceeeeccCCCCeEEEEEcCeEEEEeECCCCCccCCCCEEEEEEE
Confidence 678888 9999999999998875 599998864 211111 1112 3452 3443332246999999999998
Q ss_pred ecC------C-Cceeeeec
Q 043219 578 QGG------P-QAKVSVLS 589 (591)
Q Consensus 578 ~~~------~-~a~~~v~~ 589 (591)
+.+ . +++++|..
T Consensus 102 ~~~w~~~~tD~mp~~Yv~~ 120 (164)
T PF03173_consen 102 GEYWQVSETDAMPGWYVVA 120 (164)
T ss_dssp EES---SGGGS----EEE-
T ss_pred ccccEEEEccCCCceEEEe
Confidence 766 2 77777754
No 27
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=80.78 E-value=79 Score=33.94 Aligned_cols=31 Identities=29% Similarity=0.481 Sum_probs=22.5
Q ss_pred CchHHHHH---HHHHHHHHcCch-----HHHHHHHHhhh
Q 043219 231 GYSDDLLW---AATWLYRATNEE-----YYLKYVVDNAE 261 (591)
Q Consensus 231 ~~~De~~w---AAaeLy~aTgd~-----~Yl~~~~~~~~ 261 (591)
.+.||..| |.+.+|+.|+++ +||+.+++..+
T Consensus 85 ~~~DD~aw~~la~l~aye~t~~~~~~~~~yL~~A~~i~~ 123 (370)
T PF03663_consen 85 RYYDDNAWWALALLRAYELTGDQPSDNPKYLDLAKEIFD 123 (370)
T ss_dssp -BHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHH
T ss_pred CccChHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHH
Confidence 46677765 778899999999 99999887543
No 28
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=77.31 E-value=54 Score=35.32 Aligned_cols=125 Identities=21% Similarity=0.184 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHhhhhccC-CCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 110 MGHALWAIRWGTDYFMKAHTQ-PNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 110 ~pdiLdE~kwglDwllkm~~~-~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
.++.++.+.+|++||.+.+.. +|+-|.-+.. | +.|.+.+.+ +| ..+=+.||+|+..
T Consensus 73 ~~~~~~~v~hG~~y~~~~~R~~~gg~~~~~~~---d----g~~~Dat~d--~Y------------~haFallA~A~~a-- 129 (388)
T COG2942 73 RGPWLDAVAHGIAYLARVGRDPEGGWYFALDN---D----GGPVDATKD--LY------------GHAFALLAAAHAA-- 129 (388)
T ss_pred CccHHHHHHhHHHHHHhcCcCCCCCeEEEecC---C----CCcccccHh--HH------------HHHHHHHHHHHHH--
Confidence 566999999999999999743 3443333322 1 234443321 22 2333455555532
Q ss_pred CCCHHHHHHHHHHHHHHHHHH--H-hcCC-CCCCCCcccCCCCCCCCchHHHHHHHH-HHHHHcCchHHHHHHHHhh
Q 043219 189 PYNSSYSELLLLHAKQLFSFA--D-RFRG-LYDDSIKCAKQFYTSSGYSDDLLWAAT-WLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a--~-~~~~-~y~~~~~~~~g~Y~~~~~~De~~wAAa-eLy~aTgd~~Yl~~~~~~~ 260 (591)
...+.-|.++++.|-++++-- + +||- .|....+..... .+.- -..+..|. -=|.+|+++.|++.+.+..
T Consensus 130 ~a~~~~a~~~~~~a~~~l~~~~~~~~~pl~~~e~~~~~~~pl-~sNp--~MHl~EA~LA~~e~~~~~~~~~~A~~ia 203 (388)
T COG2942 130 TAGPPRADELLDEALDVLERRFWREEHPLGGFEEDNPGSAPL-GSNP--HMHLLEAMLAAYEATGEKTWLDRADRIA 203 (388)
T ss_pred hcCChhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCCcc-CCCc--chHHHHHHHHHHhccCchhHHHHHHHHH
Confidence 245677889999998888733 2 2331 232211111111 1111 12222222 1256799999999876543
No 29
>PF09624 DUF2393: Protein of unknown function (DUF2393); InterPro: IPR013417 The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416 from INTERPRO, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Anabaena sp. (strain PCC 7120), Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.
Probab=76.89 E-value=10 Score=35.15 Aligned_cols=73 Identities=25% Similarity=0.319 Sum_probs=47.3
Q ss_pred EEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCC-------CCCCCeEEEEEEecCC----Ccee
Q 043219 517 YKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKV-------LKPGSQCTFVYVQGGP----QAKV 585 (591)
Q Consensus 517 ~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~-------i~~G~s~~fG~i~~~~----~a~~ 585 (591)
+.++++|+|.|..++++-+++.+.. ...+...-............... |+||++.+|-++.... ..++
T Consensus 64 ~~v~g~V~N~g~~~i~~c~i~~~l~-~~~~~~~n~~~~~~~~~~~f~~~~~~i~~~L~~~e~~~f~~~~~~~p~~~~~~~ 142 (149)
T PF09624_consen 64 FYVDGTVTNTGKFTIKKCKITVKLY-NDKQVSGNKFKEIFYQQIPFVKKSIPIADNLKPGESKEFRFIFPYPPYFGNYNI 142 (149)
T ss_pred EEEEEEEEECCCCEeeEEEEEEEEE-eCCCccCchhhhhhccccchhccceeHHhhcCcccceeEEEEecCCccCCCceE
Confidence 8889999999999999999998864 33332200001111333334333 9999999999987754 4455
Q ss_pred eeecc
Q 043219 586 SVLSY 590 (591)
Q Consensus 586 ~v~~~ 590 (591)
.++++
T Consensus 143 ~~~~~ 147 (149)
T PF09624_consen 143 RVKSY 147 (149)
T ss_pred EEEEE
Confidence 55543
No 30
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=71.84 E-value=1.4e+02 Score=34.72 Aligned_cols=90 Identities=7% Similarity=-0.044 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Q 043219 115 WAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSY 194 (591)
Q Consensus 115 dE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~y 194 (591)
+.++=++|||+.||..+|++..--.+....-..+.+|.+.-.. ..+ +.+..+.|+.+.-+|+..... ++.+
T Consensus 400 ~~l~~av~~Ll~~Qn~dGGw~~y~~~~~~~~l~~~~~~~~f~~---~~~--d~~~~d~Ta~~l~aL~~~~~~----~~~~ 470 (634)
T TIGR03463 400 ARLQDAVEFILSRQNEDGGFGTYERQRGPRVLELLNPSEMFST---CMT--DVSYVECTSSCLQALAAWRKH----HPHV 470 (634)
T ss_pred HHHHHHHHHHHHhcCCCCCEeccCCCCcHHHHhcCChHHhhcc---ccc--CCCcCcHHHHHHHHHHHHhhc----Ccch
Confidence 4677899999999998887754322211110112344332100 011 123456666666667765432 2222
Q ss_pred -HHHHHHHHHHHHHHHHhcC
Q 043219 195 -SELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 195 -A~~~L~~A~~ay~~a~~~~ 213 (591)
+.++.++.+++-+|.++.+
T Consensus 471 ~~~~i~~ai~rav~~L~~~Q 490 (634)
T TIGR03463 471 PDGRITRAISRGVRFLRSRQ 490 (634)
T ss_pred hhhHHHHHHHHHHHHHHHhc
Confidence 3455556667777877754
No 31
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=70.60 E-value=1.4e+02 Score=31.32 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=22.7
Q ss_pred CChHHHHHHHHhhhhhhcCC--CCCCCceEEe
Q 043219 372 IQPQQLFDFAKSQADYILGK--NPNSMSYLVG 401 (591)
Q Consensus 372 ~~~~~y~~~a~~qldYiLG~--Np~g~SyV~G 401 (591)
.+..+|++.|.+.++.|+.. +|-|..-|.|
T Consensus 268 ~d~~~y~~~a~~a~~~l~~~~~~~dG~~~~~~ 299 (336)
T PF07470_consen 268 LDPEEYRPAAEKALEALLSNAIDPDGKLGLKG 299 (336)
T ss_dssp STHHHHHHHHHHHHHHHHHCEB-TTSSSBBTC
T ss_pred CccHHHHHHHHHHHHHHHhCccCCCCCeEEee
Confidence 35789999999999999998 7766643433
No 32
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.51 E-value=39 Score=37.49 Aligned_cols=58 Identities=22% Similarity=0.214 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhh
Q 043219 196 ELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 196 ~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~ 260 (591)
.++|+-+.++=+++.+-=+.-.+.. ..|.. .-|+-.|=++||+.|||++||+.++...
T Consensus 150 r~lldV~~rlADhi~tvfgp~~~q~----~g~~g---H~eielAl~~Ly~~Tg~~rYL~LA~~Fi 207 (589)
T COG3533 150 RRLLDVVCRLADHIATVFGPEEDQV----PGYCG---HPEIELALAELYRLTGDQRYLDLARRFI 207 (589)
T ss_pred chHHHHHHHHHHhhhhhcCcccccc----ccccC---CCchhHHHHHHHHHhcChHHHHHHHHHH
Confidence 3667777776666655322111110 11211 2478889999999999999999876543
No 33
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=64.99 E-value=1.7e+02 Score=33.92 Aligned_cols=160 Identities=12% Similarity=0.079 Sum_probs=78.5
Q ss_pred hhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcc-c--ccchHHHHHHHHHHHHHh
Q 043219 24 YNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVK-F--GLPAAFTVTMLAWGTIEY 100 (591)
Q Consensus 24 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~K-y--~~~~a~s~~~L~~a~~ef 100 (591)
..+.+.+++++.|...++. . .....|+.... .+ -.|||-=. +..+ | +--+|.++..|+- .
T Consensus 325 ~~~~~~l~ka~~wL~~~Q~-~---~~~gdw~~~~~-------~~-~~GGW~fs-~~~~~~pd~d~Ta~~l~AL~~----~ 387 (634)
T cd02892 325 PEFDPALKKALDWLLESQI-L---DNPGDWKVKYR-------HL-RKGGWAFS-TANQGYPDSDDTAEALKALLR----L 387 (634)
T ss_pred ccchHHHHHHHHHHHHHHc-C---CCCCchhhhCC-------CC-CCCCCCCC-CCCCCCCCcCchHHHHHHHHH----h
Confidence 3678899999999987776 1 11223432110 00 15666211 1111 1 1134555444432 1
Q ss_pred HHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCC---CCCCCCCCCcceeecCCCCCChHHHHHHH
Q 043219 101 RKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCW---ERAEDMTTPREAFKLDQYHPGSDLAGETA 177 (591)
Q Consensus 101 ~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W---~~Pe~~~~~R~~~~~~~~~p~s~~a~~~A 177 (591)
...... +.+...+.++=++|||++||..+|++..=-.+ ..+ .| .-|-++... . .++ .+..+.|+.+.
T Consensus 388 ~~~~~~--~~~~~~~~i~~Av~wLl~~Qn~dGgf~~y~~~--~~~-~~~~~~~p~e~~g~-~--~~d--~~~~~~Ta~~l 457 (634)
T cd02892 388 QELPPF--GEKVSRERLYDAVDWLLGMQNSNGGFAAFEPD--NTY-HWLENLNPFEDFGD-I--MID--PPYVECTGSVL 457 (634)
T ss_pred hccCCc--chhhHHHHHHHHHHHHHhccCCCCCEeeecCC--Cch-hhHhhcCchhhhcc-c--ccC--CCCcchHHHHH
Confidence 111101 22233467888999999999988887421111 001 11 113221110 0 011 24456666666
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 043219 178 AALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRG 214 (591)
Q Consensus 178 AalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~ 214 (591)
.+|+...+.+. .+-++..+..+++-+|..++..
T Consensus 458 ~aL~~~~~~~~----~~r~~i~~~i~rAv~~L~~~Q~ 490 (634)
T cd02892 458 EALGLFGKLYP----GHRREIDPAIRRAVKYLLREQE 490 (634)
T ss_pred HHHHHhcccCc----chHHHHHHHHHHHHHHHHHccC
Confidence 66665544332 2222566678888889888753
No 34
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=59.25 E-value=71 Score=33.55 Aligned_cols=80 Identities=13% Similarity=0.020 Sum_probs=51.8
Q ss_pred cchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhc
Q 043219 108 NQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAF 187 (591)
Q Consensus 108 ~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vf 187 (591)
...+.+++.++--++.|.+.|+++| +++++=+ .|+ . ..+ +-|++|+.+|.+|+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~~~l~~~q~~~G-~w~~~~~---------~~~-~----~~~------~etSatA~~a~~l~~gi~~- 265 (336)
T PF07470_consen 208 PERDELLEIAKKLADALARYQDEDG-LWYQDLD---------DPD-P----GNY------RETSATAMFAYGLLRGIRL- 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTTS-BEBSBTT---------TTT-T----TS-------BEHHHHHHHHHHHHHHHHT-
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCC-CcceecC---------CCC-C----CCc------ccHHHHHHHHHHHHHHHHc-
Confidence 4567888989989999999988555 3443321 122 0 111 2367778888888764332
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhc
Q 043219 188 KPYNSSYSELLLLHAKQLFSFADRF 212 (591)
Q Consensus 188 k~~D~~yA~~~L~~A~~ay~~a~~~ 212 (591)
.-.| .+++++.|+++|+...++
T Consensus 266 g~~d---~~~y~~~a~~a~~~l~~~ 287 (336)
T PF07470_consen 266 GLLD---PEEYRPAAEKALEALLSN 287 (336)
T ss_dssp TSST---HHHHHHHHHHHHHHHHHC
T ss_pred CCCc---cHHHHHHHHHHHHHHHhC
Confidence 1123 457888999999999887
No 35
>PRK05461 apaG CO2+/MG2+ efflux protein ApaG; Reviewed
Probab=57.07 E-value=44 Score=30.28 Aligned_cols=18 Identities=17% Similarity=0.309 Sum_probs=14.7
Q ss_pred CceEEEEEEEEEeCCCCC
Q 043219 513 ETTYYKHKVIIKNTSQKP 530 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~ 530 (591)
+.-.|.+.|+|+|.+..+
T Consensus 27 ~~y~f~Y~ItI~N~~~~~ 44 (127)
T PRK05461 27 GRYVFAYTITIENLGRVP 44 (127)
T ss_pred CEEEEEEEEEEEECCCCC
Confidence 455699999999998765
No 36
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins.; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.
Probab=53.98 E-value=41 Score=27.95 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=31.0
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEecC
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQGG 580 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~~ 580 (591)
-.+..++|+|.|.....+.++.+-..-..+ . +... ..|+||++.++-|....
T Consensus 20 ~~~i~~~V~N~G~~~~~~~~v~~~~~~~~~--~-------~~~i----~~L~~g~~~~v~~~~~~ 71 (101)
T PF07705_consen 20 PVTITVTVKNNGTADAENVTVRLYLDGNSV--S-------TVTI----PSLAPGESETVTFTWTP 71 (101)
T ss_dssp EEEEEEEEEE-SSS-BEEEEEEEEETTEEE--E-------EEEE----SEB-TTEEEEEEEEEE-
T ss_pred EEEEEEEEEECCCCCCCCEEEEEEECCcee--c-------cEEE----CCcCCCcEEEEEEEEEe
Confidence 478899999999999888888865431111 1 1111 45777777777766554
No 37
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=52.11 E-value=2.8e+02 Score=28.44 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 235 DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 235 e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
-.+|+-+.||++|++++|++.+++.
T Consensus 143 Gi~~~L~~l~~~t~d~~~l~~A~~~ 167 (321)
T cd04791 143 GIALFLLRLYKATGDSRYLELAEEA 167 (321)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 4689999999999999999987754
No 38
>COG1470 Predicted membrane protein [Function unknown]
Probab=51.74 E-value=43 Score=36.80 Aligned_cols=53 Identities=26% Similarity=0.508 Sum_probs=39.3
Q ss_pred EEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEec
Q 043219 517 YKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQG 579 (591)
Q Consensus 517 ~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~ 579 (591)
-...+.|.|.|..|+++.+|++..| |-|.+.++ +. +-|+ |.||++-+.-...+
T Consensus 399 ~~i~i~I~NsGna~LtdIkl~v~~P--qgWei~Vd--~~--~I~s----L~pge~~tV~ltI~ 451 (513)
T COG1470 399 KTIRISIENSGNAPLTDIKLTVNGP--QGWEIEVD--ES--TIPS----LEPGESKTVSLTIT 451 (513)
T ss_pred ceEEEEEEecCCCccceeeEEecCC--ccceEEEC--cc--cccc----cCCCCcceEEEEEE
Confidence 5788999999999999999999998 56998553 32 2233 67777666655444
No 39
>TIGR01451 B_ant_repeat conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.
Probab=48.82 E-value=29 Score=26.18 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=22.6
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecC
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENL 541 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~ 541 (591)
..++.++|+|+|..++++.+|+-.+|
T Consensus 13 ~v~Yti~v~N~g~~~a~~v~v~D~lP 38 (53)
T TIGR01451 13 TITYTITVTNNGNVPATNVVVTDILP 38 (53)
T ss_pred EEEEEEEEEECCCCceEeEEEEEcCC
Confidence 47889999999999999988887776
No 40
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=47.98 E-value=4.3e+02 Score=29.73 Aligned_cols=27 Identities=30% Similarity=0.222 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHhhh
Q 043219 235 DLLWAATWLYRATNEEYYLKYVVDNAE 261 (591)
Q Consensus 235 e~~wAAaeLy~aTgd~~Yl~~~~~~~~ 261 (591)
-++=|++--|++||+++-|+.+.+..+
T Consensus 129 ~ll~gl~~~y~~tG~~~~L~v~~k~ad 155 (520)
T PF07944_consen 129 KLLEGLIDYYEATGNERALDVATKLAD 155 (520)
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 456788999999999999998877543
No 41
>smart00809 Alpha_adaptinC2 Adaptin C-terminal domain. Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology PUBMED:10430869, PUBMED:12176391. The adaptor appendage contains an additional N-terminal strand.
Probab=45.44 E-value=1.9e+02 Score=24.45 Aligned_cols=69 Identities=23% Similarity=0.270 Sum_probs=43.9
Q ss_pred CCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEE
Q 043219 497 NPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVY 576 (591)
Q Consensus 497 ~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~ 576 (591)
..+.|.++++ +.++ -....+++.|.+..+|++..+.+..| ..|.+. +..++ ...|+||++.+-=+
T Consensus 5 ~~l~I~~~~~--~~~~---~~~i~~~~~N~s~~~it~f~~~~avp--k~~~l~-------l~~~s-~~~l~p~~~i~q~~ 69 (104)
T smart00809 5 NGLQIGFKFE--RRPG---LIRITLTFTNKSPSPITNFSFQAAVP--KSLKLQ-------LQPPS-SPTLPPGGQITQVL 69 (104)
T ss_pred CCEEEEEEEE--cCCC---eEEEEEEEEeCCCCeeeeEEEEEEcc--cceEEE-------EcCCC-CCccCCCCCEEEEE
Confidence 4577877653 4333 25778889999999999999998866 445442 22232 13466776655544
Q ss_pred EecC
Q 043219 577 VQGG 580 (591)
Q Consensus 577 i~~~ 580 (591)
....
T Consensus 70 ~i~~ 73 (104)
T smart00809 70 KVEN 73 (104)
T ss_pred EEEC
Confidence 4444
No 42
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.18 E-value=33 Score=34.53 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Q 043219 176 TAAALAASAIAFKPYNSSYSELLLLHAKQLFSFA 209 (591)
Q Consensus 176 ~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a 209 (591)
.|-+.+-|+..||..||.-|..||++|+++|.-.
T Consensus 73 aat~YveA~~cykk~~~~eAv~cL~~aieIyt~~ 106 (288)
T KOG1586|consen 73 AATTYVEAANCYKKVDPEEAVNCLEKAIEIYTDM 106 (288)
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHhh
Confidence 4556777889999999999999999999999844
No 43
>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins. The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=41.64 E-value=1.2e+02 Score=29.24 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEE
Q 043219 496 ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFV 575 (591)
Q Consensus 496 ~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG 575 (591)
..-+.++=.+.++-.-.| .-..++++|.|.|+.+..+-+|.-+....+.+.+ .+|. +..+| ..|+||++.+.=
T Consensus 20 ~a~llv~K~il~~~~v~g-~~v~V~~~iyN~G~~~A~dV~l~D~~fp~~~F~l---vsG~--~s~~~-~~i~pg~~vsh~ 92 (181)
T PF05753_consen 20 PARLLVSKQILNKYLVEG-EDVTVTYTIYNVGSSAAYDVKLTDDSFPPEDFEL---VSGS--LSASW-ERIPPGENVSHS 92 (181)
T ss_pred CcEEEEEEeeccccccCC-cEEEEEEEEEECCCCeEEEEEEECCCCCccccEe---ccCc--eEEEE-EEECCCCeEEEE
Confidence 345666666666665432 3377889999999999888888753223666665 4552 22234 469999988877
Q ss_pred EEec
Q 043219 576 YVQG 579 (591)
Q Consensus 576 ~i~~ 579 (591)
|+..
T Consensus 93 ~vv~ 96 (181)
T PF05753_consen 93 YVVR 96 (181)
T ss_pred EEEe
Confidence 7754
No 44
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=39.23 E-value=37 Score=29.00 Aligned_cols=20 Identities=0% Similarity=-0.001 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhhhhccCCCeE
Q 043219 114 LWAIRWGTDYFMKAHTQPNVL 134 (591)
Q Consensus 114 LdE~kwglDwllkm~~~~g~~ 134 (591)
.++++ +++||+++|..+|++
T Consensus 42 ~~~~~-~~~~L~~~q~~dGg~ 61 (113)
T PF13249_consen 42 RDRAA-AVEWLLSQQNPDGGW 61 (113)
T ss_dssp HHHHH-HHHHHHHHB-TTSGB
T ss_pred HHHHH-HHHHHHHhCCCCCCc
Confidence 55555 999999999766654
No 45
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=37.55 E-value=1.5e+02 Score=26.53 Aligned_cols=18 Identities=22% Similarity=0.418 Sum_probs=14.3
Q ss_pred ceEEEEEEEEEeCCCCCC
Q 043219 514 TTYYKHKVIIKNTSQKPI 531 (591)
Q Consensus 514 ~~~~~~~vti~N~g~~~i 531 (591)
.--|-+.|||.|+|..++
T Consensus 27 RyvfaYtitI~N~g~~~v 44 (126)
T COG2967 27 RYVFAYTVTIRNLGEVPV 44 (126)
T ss_pred eEEEEEEEEEecCCCccc
Confidence 344778999999998774
No 46
>KOG4056 consensus Translocase of outer mitochondrial membrane complex, subunit TOM20 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.02 E-value=59 Score=29.83 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHHHHHHHhccC----CCHHHHHHHHHHHHHHH
Q 043219 169 GSDLAGETAAALAASAIAFKP----YNSSYSELLLLHAKQLF 206 (591)
Q Consensus 169 ~s~~a~~~AAalA~As~vfk~----~D~~yA~~~L~~A~~ay 206 (591)
.+-+++.+|+++++++-+|-+ .||.|.+++.++.++-=
T Consensus 10 ~~vI~agiag~af~gYciYFd~KRrsdP~fk~~lr~rrk~q~ 51 (143)
T KOG4056|consen 10 TSVIAAGIAGLAFIGYCIYFDKKRRSDPDFKKKLRERRKKQA 51 (143)
T ss_pred hHHHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHh
Confidence 356778888889999999854 59999999999999853
No 47
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein. This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs.
Probab=36.41 E-value=4.5e+02 Score=27.59 Aligned_cols=114 Identities=18% Similarity=0.163 Sum_probs=64.3
Q ss_pred chHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 109 QMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
+-++++++++=.++|+.+.+.+.|.+.... ++.. ..+.+.. +-|+ .-++.++..++++++
T Consensus 182 ~~~~~~~~i~~~i~~~~~~~~~~g~w~~~~------------~~~~-~~~~~~w----ChG~---~Gi~~~l~~~~~~~~ 241 (343)
T cd04794 182 LKPSLAPLIKRSLDYLLSLQFPSGNFPSSL------------GNRK-RDRLVQW----CHGA---PGIVYLLAKAYLVFK 241 (343)
T ss_pred CCccHHHHHHHHHHHHHHhhccCCCCCCcc------------CCCC-CCccccc----cCCC---chHHHHHHHHHHHhC
Confidence 457888899999999998754333111111 1100 1121111 1222 235667778888875
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHH
Q 043219 189 PYNSSYSELLLLHAKQLFSFADRF--RGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVD 258 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~~~--~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~ 258 (591)
|+.+-+.+...++..|+..... ++..+ +..+ ..++=..||+.|++++|++.+..
T Consensus 242 --~~~~~~~~~~~~~~~~~~g~~~~~~~lCH----------G~~G----~~~~lL~~~~~~~~~~~~~~a~~ 297 (343)
T cd04794 242 --EEQYLEAAIKCGELIWKRGLLKKGPGLCH----------GIAG----NAYAFLLLYRLTGDLKYLYRACK 297 (343)
T ss_pred --CHHHHHHHHHHHHHHHHhCCccCCCcccc----------Cccc----hHHHHHHHHHHhCcHHHHHHHHH
Confidence 5667777766677666532211 22211 1223 25566788999999999987764
No 48
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=35.89 E-value=97 Score=32.59 Aligned_cols=81 Identities=17% Similarity=0.113 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCCCCCcccCCCC-C-CCCchHHH-HHHHH
Q 043219 170 SDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFR-----GLYDDSIKCAKQFY-T-SSGYSDDL-LWAAT 241 (591)
Q Consensus 170 s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~-----~~y~~~~~~~~g~Y-~-~~~~~De~-~wAAa 241 (591)
+-+.+...=++|.|++ +. +|+ +++.|++.++|..++- |.+.-... .++.- . ..-|.+-+ +.|.+
T Consensus 20 ~~~q~R~~~~fa~a~~-~g--~~~----~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~-~~~~~~~~~~~Y~~af~l~ala 91 (346)
T PF07221_consen 20 LWVQARQLYTFARAYR-LG--RPE----YLELAEHGFDFLRKHFRDPEYGGWYRSLD-DGGPLDPQKDLYDQAFALLALA 91 (346)
T ss_dssp HHHHHHHHHHHHHHHH-TT--SHH----HHHHHHHHHHHHHHTTBTTTTSSBSSEEE-TTEEEE--EEHHHHHHHHHHHH
T ss_pred eeeeHHHHHHHHHHHh-cC--chh----HHHHHHHHHHHHHHhcccCCCCCEEEEeC-CCCCCccccchHHHHHHHHHHH
Confidence 4456888999999999 54 554 7778999999998862 11110000 00000 0 01122233 55768
Q ss_pred HHHHHcCchHHHHHHHHh
Q 043219 242 WLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 242 eLy~aTgd~~Yl~~~~~~ 259 (591)
+ +++||++.|++.+++.
T Consensus 92 ~-~~~tg~~~~~~~A~~~ 108 (346)
T PF07221_consen 92 E-ARATGDPEALELAEQT 108 (346)
T ss_dssp H-HHCTT-TTHHHHHHHH
T ss_pred H-HHHhCChhHHHHHHHH
Confidence 8 9999999999987654
No 49
>PF14796 AP3B1_C: Clathrin-adaptor complex-3 beta-1 subunit C-terminal
Probab=35.55 E-value=69 Score=29.74 Aligned_cols=68 Identities=15% Similarity=0.285 Sum_probs=46.2
Q ss_pred CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCce-eecCCCcCCCCCCCeEEE
Q 043219 496 ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRT-YQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 496 ~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~-~~~psw~~~i~~G~s~~f 574 (591)
+.++.+.|+-..+=......+..++++++|++..+|++.++.-... +.|.. ..++. ...|+||++.+-
T Consensus 66 G~GL~v~Y~F~RqP~~~s~~mvsIql~ftN~s~~~i~~I~i~~k~l----------~~g~~i~~F~~-I~~L~pg~s~t~ 134 (145)
T PF14796_consen 66 GKGLSVEYRFSRQPSLYSPSMVSIQLTFTNNSDEPIKNIHIGEKKL----------PAGMRIHEFPE-IESLEPGASVTV 134 (145)
T ss_pred CCceeEEEEEccCCcCCCCCcEEEEEEEEecCCCeecceEECCCCC----------CCCcEeeccCc-ccccCCCCeEEE
Confidence 5779999987665444445578899999999999999999875432 22322 11222 245889987763
No 50
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=33.19 E-value=2e+02 Score=30.50 Aligned_cols=118 Identities=17% Similarity=0.154 Sum_probs=69.0
Q ss_pred cccceecCCCCcc----cc-cch--HHHHHHHHHHHHHhHHHHH----hccchHHHHHHHHHHHHHhhhhccCCCeEEEE
Q 043219 69 LVGGYYDAGDHVK----FG-LPA--AFTVTMLAWGTIEYRKEIT----ELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQ 137 (591)
Q Consensus 69 lsGGWyDAGD~~K----y~-~~~--a~s~~~L~~a~~ef~~~~~----s~~~~pdiLdE~kwglDwllkm~~~~g~~y~q 137 (591)
.||=||-+=|+.| -. .+. +|=.--..|.....++.++ ..+....+++-++=-++=|+|+|+++ +++||
T Consensus 175 ~TGL~YH~wd~~~~~~w~~~~sG~~~fWaRg~gW~~mal~d~le~lp~~~~~r~~l~~~l~d~v~al~r~Qde~-GlW~t 253 (357)
T COG4225 175 ETGLYYHGWDEDGTMPWANNESGEPAFWARGNGWYAMALADLLELLPEDHPDRRELLNVLRDLVDALIRYQDES-GLWHT 253 (357)
T ss_pred CcCceEEeeccCCCCccccccCCCceeeecccchHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHhhccc-cchhh
Confidence 4677888878887 22 222 1100111222222333332 22355667777777888899999854 45666
Q ss_pred eCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhcC
Q 043219 138 VGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKP-YNSSYSELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 138 Vgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~-~D~~yA~~~L~~A~~ay~~a~~~~ 213 (591)
|=|. ++|+ .| +-|++++.+|.+++.+-+ +. .+++++ ..|+++|+-...+-
T Consensus 254 iLDd-------~~~~-------sy------~EsSaSa~faYallkgi~--~G~l~~~~~----~~~~kA~~aLl~~i 304 (357)
T COG4225 254 ILDD-------GRPG-------SY------LESSASAGFAYALLKGIN--LGILDPEYA----PVAEKALDALLGHI 304 (357)
T ss_pred hhcc-------CCCC-------Cc------hhhhHHHHHHHHHHHHHh--cCCCCchhh----HHHHHHHHHHHhhc
Confidence 5331 0111 12 235667889998888766 33 367777 78899999887774
No 51
>PF01345 DUF11: Domain of unknown function DUF11; InterPro: IPR001434 This group of sequences is represented by a conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis (Streptococcus faecalis), and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydia trachomatis outer membrane proteins. In C. trachomatis, three cysteine-rich proteins (also believed to be lipoproteins), MOMP, OMP6 and OMP3, make up the extracellular matrix of the outer membrane []. They are involved in the essential structural integrity of both the elementary body (EB) and recticulate body (RB) phase. They are thought to be involved in porin formation and, as these bacteria lack the peptidoglycan layer common to most Gram-negative microbes, such proteins are highly important in the pathogenicity of the organism.; GO: 0005727 extrachromosomal circular DNA
Probab=31.87 E-value=62 Score=25.94 Aligned_cols=27 Identities=19% Similarity=0.169 Sum_probs=22.8
Q ss_pred eEEEEEEEEEeCCCCCCcceEEEEecC
Q 043219 515 TYYKHKVIIKNTSQKPITDLKLTIENL 541 (591)
Q Consensus 515 ~~~~~~vti~N~g~~~i~~w~~~~~~~ 541 (591)
.-..+.|+|+|.|+.++.+.+|.-.+|
T Consensus 41 d~v~ytitvtN~G~~~a~nv~v~D~lp 67 (76)
T PF01345_consen 41 DTVTYTITVTNTGPAPATNVVVTDTLP 67 (76)
T ss_pred CEEEEEEEEEECCCCeeEeEEEEEcCC
Confidence 347889999999999999988887666
No 52
>PLN03012 Camelliol C synthase
Probab=29.17 E-value=8e+02 Score=29.21 Aligned_cols=163 Identities=12% Similarity=0.166 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHhHHHhcCCCC-CCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHH-HHHHHHHHHhHH
Q 043219 25 NYDEALDKTFLFFEAQRSGKL-QENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTV-TMLAWGTIEYRK 102 (591)
Q Consensus 25 ~Y~~~l~~sl~ff~~QRsG~l-p~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~-~~L~~a~~ef~~ 102 (591)
.+...+++++.|...+..-.. |.+-....|+ ...|.=.=-+...||=|.=|. |.++ ..|+.+. .+.
T Consensus 436 ~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~---~~~GgW~Fs~~~~gyp~sD~T-------Ae~Lka~lll~~--~~~ 503 (759)
T PLN03012 436 EIPDVLRRGHDFIKNSQVGENPSGDFKNMYRH---ISKGAWTFSDRDHGWQASDCT-------AEGFKCCLLFSM--IAP 503 (759)
T ss_pred cchHHHHHHHHHHHHHhccCCCCChhhhhCCC---CCCCcccccCCCCCCCCCCcc-------HHHHHHHHHHHh--ccc
Confidence 688899999999988776542 2221222221 111110000123445444441 2222 1222222 111
Q ss_pred HHHhccchHHHHHHHHHHHHHhhhhccCCCeE--EEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHH
Q 043219 103 EITELNQMGHALWAIRWGTDYFMKAHTQPNVL--WAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAAL 180 (591)
Q Consensus 103 ~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~--y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAal 180 (591)
.. .+..++ -+-++=++||||.||..+|++ |-+-.+ ..-..+.+|-+.-.+ + .|+ .+.+|.|+.+.-||
T Consensus 504 ~~-~~~~~~--~~~l~~av~wlL~mQn~dGGwaafe~~~~--~~~le~lnp~E~F~d--~-mid--~~y~dcTa~~l~aL 573 (759)
T PLN03012 504 DI-VGPKMD--PEQLHDAVNILLSLQSKNGGMTAWEPAGA--PEWLELLNPTEMFAD--I-VIE--HEYNECTSSAIQAL 573 (759)
T ss_pred cc-cccccc--HHHHHHHHHHHHhccCCCCCEeeecCCcc--hHHHHhcChhhhhcC--e-ecC--CCcccHHHHHHHHH
Confidence 11 011111 256888999999999999877 332211 111112344221111 1 232 35567777777777
Q ss_pred HHHHHhccCCCHHH-HHHHHHHHHHHHHHHHhcC
Q 043219 181 AASAIAFKPYNSSY-SELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 181 A~As~vfk~~D~~y-A~~~L~~A~~ay~~a~~~~ 213 (591)
++-...+ |.+ .++.-..-+++-+|.++.+
T Consensus 574 ~~f~~~~----~~~r~~~i~~~i~rAv~~L~~~Q 603 (759)
T PLN03012 574 ILFKQLY----PDHRTEEINAFIKKAAEYIENIQ 603 (759)
T ss_pred HHHhhhC----cccchhhhHHHHHHHHHHHHHhc
Confidence 7644433 332 2222233444555666654
No 53
>PLN02993 lupeol synthase
Probab=27.90 E-value=4.2e+02 Score=31.55 Aligned_cols=165 Identities=7% Similarity=0.017 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHhHHHhcCCCCC-CCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHH-HHHHHHHHhHH
Q 043219 25 NYDEALDKTFLFFEAQRSGKLQ-ENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVT-MLAWGTIEYRK 102 (591)
Q Consensus 25 ~Y~~~l~~sl~ff~~QRsG~lp-~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~-~L~~a~~ef~~ 102 (591)
.+...++++..|...+..-..+ .+-.+..|+ ...|.=.=-+...||=|.-|. |.++- .|+. ...+.
T Consensus 436 ~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~---~~~GgW~Fs~~~~gyp~sDdT-------Ae~lka~l~l--~~~~~ 503 (763)
T PLN02993 436 ETDDVLRRGHNYIKKSQVRENPSGDFKSMYRH---ISKGAWTLSDRDHGWQVSDCT-------AEALKCCMLL--SMMPA 503 (763)
T ss_pred ccCHHHHHHHHHHHHHhccCCCCCchHhhCCC---CCCCcCcCccCCCCCCcCCch-------HHHHHHHHHH--hhCcc
Confidence 5778999999998877665322 221222221 111111111234566666662 22221 1121 11221
Q ss_pred HHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHH
Q 043219 103 EITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAA 182 (591)
Q Consensus 103 ~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~ 182 (591)
+.. +-+---+-++=++||||.||..+|++=.=-.+....-..+.+|.+.-.. + .++ .|..+.|+.+.-+|++
T Consensus 504 --~~~-~~~~~~~~l~~av~wlL~mQn~dGG~aafe~~~~~~~le~ln~ae~f~~--~-miD--~~~~dcT~~vl~aL~~ 575 (763)
T PLN02993 504 --DVV-GQKIDPEQLYDSVNLLLSLQSENGGVTAWEPVRAYKWLELLNPTDFFAN--T-MVE--REYVECTSAVIQALVL 575 (763)
T ss_pred --ccc-cccchHHHHHHHHHHHHhhccCCCCEEeeeCCCchhHHHcCCHHHhhcC--c-ccC--CCCcCHHHHHHHHHHH
Confidence 100 1111125688899999999999987633222211111112345432000 0 111 2445666666666664
Q ss_pred HHHhccCCCHHH-HHHHHHHHHHHHHHHHhcC
Q 043219 183 SAIAFKPYNSSY-SELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 183 As~vfk~~D~~y-A~~~L~~A~~ay~~a~~~~ 213 (591)
-.. ..|.+ .++.-+.-+++-+|..+.+
T Consensus 576 ~~~----~~p~~r~~ei~~~i~rAv~yL~~~Q 603 (763)
T PLN02993 576 FKQ----LYPDHRTKEIIKSIEKAVQFIESKQ 603 (763)
T ss_pred hcc----cCcchhhhhHHHHHHHHHHHHHHhc
Confidence 332 22332 2222333445555666654
No 54
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=27.22 E-value=60 Score=35.99 Aligned_cols=24 Identities=38% Similarity=0.499 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHcCchHHHHHHHHh
Q 043219 236 LLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 236 ~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
++.|++|||++|+++.|++.+...
T Consensus 442 ~L~allEL~~atq~~~~l~lA~~~ 465 (557)
T PF06917_consen 442 LLFALLELYQATQDARYLELADQV 465 (557)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 477999999999999999988653
No 55
>PF07233 DUF1425: Protein of unknown function (DUF1425); InterPro: IPR010824 This family consists of several hypothetical bacterial proteins of around 125 residues in length. Several members of this family are described as putative lipoproteins and are often known as YcfL. The function of this family is unknown.; PDB: 3O0L_A.
Probab=27.01 E-value=1.8e+02 Score=24.62 Aligned_cols=56 Identities=23% Similarity=0.393 Sum_probs=28.8
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeec--CCCcC-CCCCCCeEEEEEEecCC
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQL--PPWLK-VLKPGSQCTFVYVQGGP 581 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~--psw~~-~i~~G~s~~fG~i~~~~ 581 (591)
.-++.++|+|+...+++ ....|.+. +..|..+.. .+|.. .|.++++.++=-+...+
T Consensus 25 ~~~~~~~l~N~~~~~~~-l~Yrf~Wy---------D~~G~~v~~~~~~w~~~~l~~~~~~~l~~~ap~~ 83 (94)
T PF07233_consen 25 LLRAQATLSNKSSKPLT-LQYRFYWY---------DKQGLEVDPEQSPWQSLTLPGGQTVTLSAVAPNP 83 (94)
T ss_dssp EEEEEEEEEE-SSS-EE-EEEEEEEE----------TTS-EE--TT---EEEEE-TT-EEEEEEE-SST
T ss_pred eEEEEEEEEECCCCcEE-EEEEEEEE---------CCCCCCcCCCCCCCEEEEEcCCCEEEEEEECCCC
Confidence 37899999999987754 33333322 344433332 26754 57888999888876655
No 56
>PF13598 DUF4139: Domain of unknown function (DUF4139)
Probab=26.97 E-value=1e+02 Score=32.02 Aligned_cols=84 Identities=13% Similarity=0.200 Sum_probs=52.7
Q ss_pred CCCCeeEEeecccc-----ccCCC-ceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCC-------ceeecCC
Q 043219 495 SENPVEFLHSIAST-----WNVGE-TTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSEN-------RTYQLPP 561 (591)
Q Consensus 495 ~~~~~~~~~~~~~~-----W~~g~-~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g-------~~~~~ps 561 (591)
....++|+.+.... +.+.. ..-+.++++|+|....+++ .+|.-..|++.-+.+.+.... ..-....
T Consensus 216 ~d~~v~v~r~~~~~~~~~g~~~~~~~~~~~~~itv~N~~~~~v~-v~v~d~iPvs~~~~I~V~~~~~~~~~~~~~~g~~~ 294 (317)
T PF13598_consen 216 VDPDVRVERKLLKKEEERGFFGKSQRRTYEYTITVRNNKDEPVT-VTVEDQIPVSEDEDIKVELLEPPEPNEDEKDGILE 294 (317)
T ss_pred cCCCEEEEEEecceecccccccccEEEEEEEEEEEECCCCCCEE-EEEEeCCCCCCCceEEEEEcCCCCCcccCCCCEEE
Confidence 45667777776554 11221 3347899999999988865 555555677777777542111 1233446
Q ss_pred CcCCCCCCCeE--EEEEEec
Q 043219 562 WLKVLKPGSQC--TFVYVQG 579 (591)
Q Consensus 562 w~~~i~~G~s~--~fG~i~~ 579 (591)
|.-.|+||++. +|+|.++
T Consensus 295 W~~~l~~g~~~~l~~~y~v~ 314 (317)
T PF13598_consen 295 WKVTLPPGESRTLEFSYEVE 314 (317)
T ss_pred EEEEECCCCEEEEEEEEEEE
Confidence 88889999865 5666554
No 57
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol and isomultiflorenol.
Probab=26.58 E-value=2.7e+02 Score=32.25 Aligned_cols=25 Identities=4% Similarity=0.150 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhhhccCCCeEEE
Q 043219 112 HALWAIRWGTDYFMKAHTQPNVLWA 136 (591)
Q Consensus 112 diLdE~kwglDwllkm~~~~g~~y~ 136 (591)
++.+.|+=+++||+++|..+|.++.
T Consensus 457 ~~~~~i~rAl~~L~~~Q~~DGsw~g 481 (621)
T TIGR01787 457 EIRNVLERALEYLRREQRADGSWFG 481 (621)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcc
Confidence 4557899999999999988887753
No 58
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=26.49 E-value=1.1e+03 Score=27.89 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCC-CCCCchHHHHHHHHHHHHHcCchHH
Q 043219 174 GETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFY-TSSGYSDDLLWAATWLYRATNEEYY 252 (591)
Q Consensus 174 ~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y-~~~~~~De~~wAAaeLy~aTgd~~Y 252 (591)
+-+|-.|+..+++.. |+.|.+.+.+..+.+-+..+..+.. . ...+.| +.. -.+++...|++.|+++.|
T Consensus 494 aGIal~l~~l~~~t~--~~~~~~~a~~~l~~l~~~~~~~~~~--~---~~~gl~~G~a----Gi~~~L~~l~~~~~~~~~ 562 (825)
T cd04792 494 AGIALFLAYLGQLTG--DERYTRLARKILDSLVKSLSELKTD--D---TGIGAFSGLG----GILYALTHLGKLLKDDRL 562 (825)
T ss_pred HHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHhccccc--c---cCceeEechh----HHHHHHHHHHHHcCCHHH
Confidence 445556666666653 4445444444444444433332110 0 012233 222 457888899999999999
Q ss_pred HHHHHHhh
Q 043219 253 LKYVVDNA 260 (591)
Q Consensus 253 l~~~~~~~ 260 (591)
++.+.+..
T Consensus 563 ~~~a~~~~ 570 (825)
T cd04792 563 LNLAKEIL 570 (825)
T ss_pred HHHHHHHH
Confidence 98877643
No 59
>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.
Probab=25.82 E-value=2.4e+02 Score=25.67 Aligned_cols=66 Identities=17% Similarity=0.093 Sum_probs=42.4
Q ss_pred CceEEEEEEEEEeCCCCCCcceEEEEecC-----CCCcccceeecCC-ceeecCCCcCCCCCCCeEEEEEEecCC
Q 043219 513 ETTYYKHKVIIKNTSQKPITDLKLTIENL-----SGSLWGLSPTSEN-RTYQLPPWLKVLKPGSQCTFVYVQGGP 581 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~i~~w~~~~~~~-----~~~~Wn~~~~~~g-~~~~~psw~~~i~~G~s~~fG~i~~~~ 581 (591)
+..-++.+.+|+|++..+..=..|..++. +-.-|.+....-. .... =+..|+||++..|-.....+
T Consensus 66 ~~~~l~v~g~i~N~~~~~~~~P~l~l~L~D~~g~~l~~r~~~P~~yl~~~~~---~~~~l~pg~~~~~~~~~~~p 137 (149)
T PF11906_consen 66 GPGVLVVSGTIRNRADFPQALPALELSLLDAQGQPLARRVFTPADYLPPGLA---AQAGLPPGESVPFRLRLEDP 137 (149)
T ss_pred CCCEEEEEEEEEeCCCCcccCceEEEEEECCCCCEEEEEEEChHHhcccccc---cccccCCCCeEEEEEEeeCC
Confidence 46679999999999999888777776654 1122433211100 0001 14569999999999887755
No 60
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=25.56 E-value=3.9e+02 Score=27.79 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCC-CCCCCCCCCcccccccee--cCCCCcccccchHHHHHHHHHHHHHh
Q 043219 24 YNYDEALDKTFLFFEAQRSGKLQENQRVKWRGD-SGLKDGSLQGVDLVGGYY--DAGDHVKFGLPAAFTVTMLAWGTIEY 100 (591)
Q Consensus 24 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~-s~l~Dg~~~~~DlsGGWy--DAGD~~Ky~~~~a~s~~~L~~a~~ef 100 (591)
..|.+.+++++.|...+.--..+.. |... .+ .-.|||- +.+..-..+.-+++++..|+- +.++
T Consensus 42 ~~~~~~~~ka~~~l~~~q~~~~~~~----~~~~~~~---------~~~Ggw~y~~~~~~~~~~~~Ta~~l~al~~-~~~~ 107 (348)
T cd02889 42 PEFDPALKKALEWLLKSQIRDNPDD----WKVKYRH---------LRKGGWAFSTANQGYPDSDDTAEALKALLR-LQKK 107 (348)
T ss_pred CccCHHHHHHHHHHHhcCCCCCCCc----hhhcCCC---------CCCCcCcccCcCCCCCCCCChHHHHHHHHH-hhcc
Confidence 3688999999998877652112211 1100 11 1234432 111100112345666655542 2222
Q ss_pred HHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCC--CCCCCCCCcceeecCCCCCChHHHHHHHH
Q 043219 101 RKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWE--RAEDMTTPREAFKLDQYHPGSDLAGETAA 178 (591)
Q Consensus 101 ~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~--~Pe~~~~~R~~~~~~~~~p~s~~a~~~AA 178 (591)
.+ .+.+...+.++=+++||+++|..+|++..--.. . +..|. .|+.. .... .+ .+..+.|+.+..
T Consensus 108 ~~-----~~~~~~~~~i~~a~~~L~~~Q~~dG~f~~~~~~--~-~~~~~~~~~~~~-~~~~---~~--~~~~~~Ta~~l~ 173 (348)
T cd02889 108 PP-----DGKKVSRERLYDAVDWLLSMQNSNGGFAAFEPD--N-TYKYLELIPEVD-GDIM---ID--PPYVECTGSVLE 173 (348)
T ss_pred Cc-----ccchhhHHHHHHHHHHHHHhccCCCCEeeecCC--c-cHHHHhcCchhh-cCCc---cC--CCCcchHHHHHH
Confidence 11 134455678888999999999888877421110 0 00110 11111 0100 11 122344566666
Q ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Q 043219 179 ALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 179 alA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~ 213 (591)
+|+.+.+.... ..+++.+..+++-+|..+..
T Consensus 174 aL~~~~~~~~~----~~~~~~~~i~~a~~~L~~~q 204 (348)
T cd02889 174 ALGLFGKLYPE----HRREIDPAIRRAVKYLEREQ 204 (348)
T ss_pred HHHHhhhcCCc----hHHHHHHHHHHHHHHHHHhC
Confidence 66665554322 22356667777888877653
No 61
>TIGR02588 conserved hypothetical protein TIGR02588. The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.
Probab=22.98 E-value=5.6e+02 Score=23.09 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=42.7
Q ss_pred EEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCC-ceeecCCCcCCCCCCCeEEEEEEecCCCc----eeeeecc
Q 043219 517 YKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSEN-RTYQLPPWLKVLKPGSQCTFVYVQGGPQA----KVSVLSY 590 (591)
Q Consensus 517 ~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g-~~~~~psw~~~i~~G~s~~fG~i~~~~~a----~~~v~~~ 590 (591)
|.+.++|+|.|..+..+-++.-.+...+. + ...+ .++.+ |+-|+..+=+||-..+|. .+.|.||
T Consensus 51 yyVpF~V~N~gg~TAasV~V~geL~~~~~--v--~E~~e~tiDf------l~g~e~~~G~~IF~~dP~~g~L~irv~gY 119 (122)
T TIGR02588 51 YYVPFAIHNLGGTTAAAVNIRGELRQAGA--V--VENAEVTIDY------LASGSKENGTLIFRSDPRNGQLRLRVAGY 119 (122)
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEEccCCc--e--eEEeeEEEEE------cCCCCeEeEEEEEccCcccCeEEEEEEec
Confidence 88999999999999999888776552211 1 2232 34543 455777788888777643 4556666
No 62
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=22.65 E-value=4.5e+02 Score=30.55 Aligned_cols=22 Identities=5% Similarity=-0.115 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhhhhccCCCeE
Q 043219 113 ALWAIRWGTDYFMKAHTQPNVL 134 (591)
Q Consensus 113 iLdE~kwglDwllkm~~~~g~~ 134 (591)
.-+.++=++|||++||..+|++
T Consensus 401 ~~~~i~ra~~wLl~~Qn~dGgw 422 (635)
T TIGR01507 401 RRDAMTKAFRWIAGMQSSNGGW 422 (635)
T ss_pred chHHHHHHHHHHHHhcCCCCCE
Confidence 3467889999999999888876
No 63
>PF13243 Prenyltrans_1: Prenyltransferase-like; PDB: 3SDR_A 3SAE_A 3SDV_A 3SDT_A 3SDQ_A 3SDU_A.
Probab=22.06 E-value=19 Score=30.88 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhhhhccCCCe
Q 043219 112 HALWAIRWGTDYFMKAHTQPNV 133 (591)
Q Consensus 112 diLdE~kwglDwllkm~~~~g~ 133 (591)
...+-|+=+++||+++|.++|+
T Consensus 43 ~~~~ai~ka~~~l~~~Q~~dG~ 64 (109)
T PF13243_consen 43 AVDEAIKKAIDWLLSHQNPDGG 64 (109)
T ss_dssp -SSBSSHHHHHHHHH---TTS-
T ss_pred CcHHHHHHHHHHHHHhcCCCCC
Confidence 5666678899999999876664
No 64
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=21.76 E-value=3.9e+02 Score=27.77 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhhhccCCCeEE
Q 043219 112 HALWAIRWGTDYFMKAHTQPNVLW 135 (591)
Q Consensus 112 diLdE~kwglDwllkm~~~~g~~y 135 (591)
.+.+.++=.++||+++|..+|.++
T Consensus 188 ~~~~~i~~a~~~L~~~q~~dG~w~ 211 (348)
T cd02889 188 EIDPAIRRAVKYLEREQEPDGSWY 211 (348)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcc
Confidence 456678889999999997777654
No 65
>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []. The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].
Probab=21.46 E-value=82 Score=29.96 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=24.6
Q ss_pred EEEEEEEEeCCC-CCCcc--eEEEEecC----CCCcccceee
Q 043219 517 YKHKVIIKNTSQ-KPITD--LKLTIENL----SGSLWGLSPT 551 (591)
Q Consensus 517 ~~~~vti~N~g~-~~i~~--w~~~~~~~----~~~~Wn~~~~ 551 (591)
|.+.|||.|.-. +-|.. |+|+|+.. |-++.++..+
T Consensus 1 Y~A~VTi~N~~~yr~id~pgW~L~W~W~~~E~IwsM~GA~~t 42 (169)
T PF04833_consen 1 YVAQVTISNYQPYRHIDNPGWNLGWTWAKKEFIWSMKGAQTT 42 (169)
T ss_pred CEEEEEEecCCeecccCCCCceEeeEEcCCEEEEEeeCceec
Confidence 679999999732 34555 99999976 5566666544
No 66
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms]
Probab=20.21 E-value=4.4e+02 Score=31.65 Aligned_cols=83 Identities=19% Similarity=0.165 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcC
Q 043219 170 SDLAGETAAALAASAIAFKPYN-SSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATN 248 (591)
Q Consensus 170 s~~a~~~AAalA~As~vfk~~D-~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTg 248 (591)
+|.....|.++-.--++||.+| |.+=+..+.-++.+++-+...-. +. +-.++.+.-.+-.+.|=+.||.+||
T Consensus 738 ~d~i~Gl~g~i~~L~~iYk~~~epk~l~~ais~~~~l~~~~v~~d~----s~---~~l~gfshg~sgi~~tL~~ly~~T~ 810 (963)
T COG4403 738 PDFINGLAGVICVLVSIYKLTDEPKFLELAISLGRILMEKIVGNDS----SE---TVLLGFSHGASGIILTLLKLYEATG 810 (963)
T ss_pred cchhhccHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcccc----cc---ceecccccchHHHHHHHHHHHHhcC
Confidence 4545555566555556777776 55555555566666554433321 11 2234455556778999999999999
Q ss_pred chHHHHHHHHh
Q 043219 249 EEYYLKYVVDN 259 (591)
Q Consensus 249 d~~Yl~~~~~~ 259 (591)
|++|++.+++.
T Consensus 811 e~~l~~~i~e~ 821 (963)
T COG4403 811 EESLLKKIKEL 821 (963)
T ss_pred cHHHHHHHHHH
Confidence 99999998764
Done!