Query 043219
Match_columns 591
No_of_seqs 287 out of 1657
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:02:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tf4_A T. fusca endo/EXO-cellu 100.0 1E-114 4E-119 969.4 39.2 477 22-537 2-500 (605)
2 2xfg_A Endoglucanase 1; hydrol 100.0 4E-114 1E-118 937.6 36.0 439 19-493 19-464 (466)
3 1ks8_A Endo-B-1,4-glucanase; c 100.0 3E-114 1E-118 933.4 33.8 430 23-491 2-431 (433)
4 1g87_A Endocellulase 9G; endog 100.0 5E-113 2E-117 957.2 41.7 474 23-537 3-496 (614)
5 1ia6_A Cellulase CEL9M; cellul 100.0 4E-113 1E-117 926.2 35.5 425 22-494 2-432 (441)
6 2yik_A Endoglucanase; hydrolas 100.0 4E-113 1E-117 958.0 29.7 442 19-493 33-517 (611)
7 1clc_A Endoglucanase CELD; EC: 100.0 2E-100 8E-105 859.9 34.4 425 15-492 118-565 (639)
8 3gzk_A Cellulase; fold from GH 100.0 3E-100 1E-104 843.6 29.8 424 14-492 76-535 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.1E-97 4E-102 835.7 29.8 447 15-490 90-606 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.5E-67 5.1E-72 580.3 22.6 400 16-483 86-559 (586)
11 3ndz_E Endoglucanase D; cellot 99.7 1.7E-18 5.6E-23 150.3 6.6 88 497-588 1-100 (107)
12 1exg_A EXO-1,4-beta-D-glycanas 99.7 2.6E-17 9E-22 144.0 7.2 89 496-589 5-104 (110)
13 3icg_A Endoglucanase D; cellul 99.5 1.3E-14 4.4E-19 160.4 6.6 90 495-588 379-480 (515)
14 2cwr_A Chitinase; chitin-bindi 99.4 7.3E-13 2.5E-17 113.9 8.3 71 499-581 10-86 (103)
15 1e5b_A Xylanase D; hydrolase, 99.2 1.9E-12 6.4E-17 107.9 2.0 69 498-581 2-74 (87)
16 1heh_C Endo-1,4-beta-xylanase 99.2 8.3E-12 2.8E-16 104.2 4.6 70 497-581 2-75 (88)
17 2gz6_A N-acetyl-D-glucosamine 96.2 0.53 1.8E-05 48.9 22.2 114 122-260 22-144 (388)
18 3k7x_A LIN0763 protein; Q92DQ0 95.8 0.22 7.4E-06 51.7 16.6 122 109-260 109-242 (349)
19 3gt5_A N-acetylglucosamine 2-e 95.4 0.042 1.4E-06 58.1 9.5 143 80-259 48-201 (402)
20 2gz6_A N-acetyl-D-glucosamine 95.3 0.07 2.4E-06 55.7 10.7 123 109-259 71-200 (388)
21 3gt5_A N-acetylglucosamine 2-e 93.5 0.94 3.2E-05 47.6 14.3 171 70-259 153-338 (402)
22 3k7x_A LIN0763 protein; Q92DQ0 92.3 2.4 8.2E-05 43.7 15.1 67 177-260 52-121 (349)
23 2zzr_A Unsaturated glucuronyl 91.7 1 3.5E-05 47.4 11.4 129 109-259 131-274 (397)
24 1fp3_A N-acyl-D-glucosamine 2- 91.5 1.2 4.1E-05 46.5 12.0 118 113-259 15-150 (402)
25 2ahf_A Unsaturated glucuronyl 90.2 1.1 3.8E-05 46.8 10.1 130 110-260 106-250 (377)
26 1nc5_A Hypothetical protein YT 89.6 8.9 0.0003 39.6 16.5 72 174-261 44-117 (373)
27 3k11_A Putative glycosyl hydro 88.1 3.1 0.00011 44.4 11.7 114 108-248 287-415 (445)
28 1nc5_A Hypothetical protein YT 87.2 10 0.00036 39.1 15.1 57 197-259 107-171 (373)
29 2zbl_A Putative isomerase; N-a 85.7 9.3 0.00032 40.1 13.9 136 109-259 189-344 (421)
30 1fp3_A N-acyl-D-glucosamine 2- 84.7 2.8 9.5E-05 43.7 9.2 84 168-259 246-342 (402)
31 3k11_A Putative glycosyl hydro 78.7 42 0.0014 35.6 15.6 79 174-259 148-232 (445)
32 2ahf_A Unsaturated glucuronyl 75.6 24 0.00081 36.6 12.4 145 90-259 154-313 (377)
33 2zbl_A Putative isomerase; N-a 73.8 13 0.00043 39.1 10.0 115 112-259 12-138 (421)
34 3pmm_A Putative cytoplasmic pr 72.1 24 0.00083 36.5 11.5 114 111-260 25-139 (382)
35 3pmm_A Putative cytoplasmic pr 67.7 19 0.00066 37.3 9.6 77 108-212 256-332 (382)
36 2zzr_A Unsaturated glucuronyl 61.4 63 0.0022 33.6 12.1 43 89-139 178-221 (397)
37 3e6u_A LANC-like protein 1; al 61.2 84 0.0029 32.6 13.2 114 109-259 248-363 (411)
38 2kut_A Uncharacterized protein 58.4 31 0.001 29.8 7.5 56 516-579 17-74 (122)
39 1w6k_A Lanosterol synthase; cy 54.5 1.4E+02 0.0049 33.5 14.4 92 114-213 480-571 (732)
40 2p0v_A Hypothetical protein BT 53.1 87 0.003 33.5 11.4 94 111-212 204-319 (489)
41 1gxm_A Pectate lyase; mechanis 52.9 1.1E+02 0.0036 31.1 11.5 83 110-213 92-182 (332)
42 1r76_A Pectate lyase; A-helica 44.8 1E+02 0.0036 32.1 10.3 85 109-213 169-258 (408)
43 1c7s_A Beta-N-acetylhexosamini 41.6 60 0.0021 37.3 8.6 70 507-580 34-111 (858)
44 1ifr_A Lamin A/C; immunoglobul 33.0 50 0.0017 28.4 4.7 44 521-574 21-66 (121)
45 2l0d_A Cell surface protein; s 32.9 1.1E+02 0.0037 25.9 6.8 25 516-540 20-44 (114)
46 2lll_A Lamin-B2; immunoglobuli 32.5 44 0.0015 29.5 4.4 44 521-574 36-81 (139)
47 1xq4_A Protein APAG; all beta 31.9 87 0.003 27.6 6.2 19 513-531 31-49 (139)
48 3idu_A Uncharacterized protein 31.5 90 0.0031 26.9 6.2 50 516-579 34-83 (127)
49 1xvs_A Protein APAG; MCSG APC2 30.9 76 0.0026 27.5 5.5 19 513-531 26-44 (126)
50 1tza_A APAG protein, SOR45; st 29.4 74 0.0025 27.9 5.3 19 513-531 26-44 (134)
51 2f1e_A Protein APAG; APAG prot 29.0 91 0.0031 27.0 5.7 19 513-531 27-45 (127)
52 1ufg_A Lamin A, nuclear lamin; 27.3 68 0.0023 28.7 4.7 44 521-574 52-97 (151)
53 3mnm_A ADP-ribosylation factor 26.5 2.3E+02 0.0078 24.1 7.9 47 497-549 17-63 (123)
54 2v8i_A Pectate lyase; periplas 26.2 43 0.0015 35.5 3.6 25 235-259 430-454 (543)
55 3o0l_A Uncharacterized protein 25.1 1.9E+02 0.0067 24.2 7.0 72 496-581 23-97 (112)
56 2g0d_A Nisin biosynthesis prot 23.8 3.6E+02 0.012 27.3 10.5 69 174-258 282-352 (409)
57 3hn9_A Lamin-B1; structural ge 23.6 68 0.0023 27.6 3.9 43 521-574 27-71 (123)
58 2xbt_A Cellulosomal scaffoldin 23.5 1.1E+02 0.0039 27.4 5.6 39 496-538 7-49 (160)
59 2kmg_A KLCA; ARDB, spectroscop 21.4 48 0.0016 29.4 2.5 87 122-214 40-133 (142)
60 3isy_A Bsupi, intracellular pr 20.8 2.3E+02 0.008 24.1 6.7 57 517-579 20-87 (120)
61 3jt0_A Lamin-B1; structural ge 20.3 84 0.0029 27.8 3.9 43 521-574 40-84 (144)
No 1
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=1.2e-114 Score=969.44 Aligned_cols=477 Identities=42% Similarity=0.712 Sum_probs=419.9
Q ss_pred chhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHhH
Q 043219 22 AEYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYR 101 (591)
Q Consensus 22 ~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~ 101 (591)
..++|.++|++||+||++||||++|+.+|++||++||+.||++.++||+|||||||||+||++|||+++++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHH
Q 043219 102 KEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALA 181 (591)
Q Consensus 102 ~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA 181 (591)
+.|+++|++||||||||||+|||||||++++.||+||||+..||.+|.+||+|+.+|++|.++.++|+|++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlA 161 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA 161 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CCchHHHHHHHHHHHHHcCchHHHHHHHHhh
Q 043219 182 ASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS-SGYSDDLLWAATWLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 182 ~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~-~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~ 260 (591)
+||||||++||+||++||++||++|+||++||+.|.++++ .+++|.+ +++.||++|||+|||+||||++|+++++++.
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 240 (605)
T 1tf4_A 162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240 (605)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred HHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988877 7889988 9999999999999999999999999999876
Q ss_pred hhcCCCCCC-----cccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceec
Q 043219 261 EYMGGTGWA-----VKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYV 335 (591)
Q Consensus 261 ~~~~~~~~~-----~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~ 335 (591)
..++...+. ...|+||++..|+++||+++. ++ +.|++.++.++|.++.+.+++++++||+|+.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~--------~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~ 310 (605)
T 1tf4_A 241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--GK--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVL 310 (605)
T ss_dssp GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCC
T ss_pred HhcccccccccccccccccccchHHHHHHHHHhcc--Ch--------HHHHHHHHHHHHHHhcccCCCccccCCCcceec
Confidence 554422111 136899999999999888753 11 357788888888776555678899999999998
Q ss_pred cccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccC
Q 043219 336 REWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGS 415 (591)
Q Consensus 336 ~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s 415 (591)
..||+++|++|.+||+++|++++... .+..+|+++|++|||||||+||+++|||||||+|+|++||||++
T Consensus 311 ~~WGs~~~~~n~a~l~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~s 380 (605)
T 1tf4_A 311 DTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA 380 (605)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCccccc
Confidence 99999999999999999999886311 13578999999999999999999999999999999999999999
Q ss_pred cccccccCCCCcccCcccccccccCCCCCCcccceeecCCCC-CCcccCCCCccccCcccccccchhhhhhhhhccCCCC
Q 043219 416 SMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQ-NDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSKT 494 (591)
Q Consensus 416 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~-~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~~ 494 (591)
+|+ |...++.|.++|++|+|+||||||. .|+|.|+|.+|++||||||||||||++||+|....++
T Consensus 381 s~~--------------~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 446 (605)
T 1tf4_A 381 HGS--------------WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446 (605)
T ss_dssp HTC--------------SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred ccC--------------ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 873 1223456778999999999999998 9999999999999999999999999999999876433
Q ss_pred --------CC----CCeeEEeeccccccCCCceEEEEEEEEEeCCCC---CCcceEEE
Q 043219 495 --------SE----NPVEFLHSIASTWNVGETTYYKHKVIIKNTSQK---PITDLKLT 537 (591)
Q Consensus 495 --------~~----~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~---~i~~w~~~ 537 (591)
++ ..+.|+.++. ..+..+.+.++.|.|++.. .+++.++.
T Consensus 447 ~p~~~~~~~~~~~~~e~~vea~~~----~~~~~~~~~~~~i~N~s~~p~~~l~~l~~R 500 (605)
T 1tf4_A 447 TPLADFPPTEEPDGPEIFVEAQIN----TPGTTFTEIKAMIRNQSGWPARMLDKGTFR 500 (605)
T ss_dssp CCCSSCSCCCCCSSCSEEEEEEEE----ECCSSEEEEEEEEEECCCTTCCCBCSEEEE
T ss_pred CcCCCCCCCCCCCCCceEEEEEec----cCCCCceeEEEEEEeCCCCCceecCCceEE
Confidence 11 2234444432 2234668999999997654 44566664
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=3.8e-114 Score=937.61 Aligned_cols=439 Identities=40% Similarity=0.694 Sum_probs=389.6
Q ss_pred cccchhhHHHHHHHHHHhHHHhcCCCC-CCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHH
Q 043219 19 ADAAEYNYDEALDKTFLFFEAQRSGKL-QENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGT 97 (591)
Q Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~l-p~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~ 97 (591)
.+.++++|.++|++||+||++||||++ |+.++++||++||++||++.++||+|||||||||+||++|||+++++|+|++
T Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~ 98 (466)
T 2xfg_A 19 PATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAV 98 (466)
T ss_dssp --CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHH
Confidence 356679999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHH
Q 043219 98 IEYRKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETA 177 (591)
Q Consensus 98 ~ef~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~A 177 (591)
+||++.|++++++||||||||||+|||||||+++|.||+|||++..||.+|.+||+++.+|++|.+++++|+|++++++|
T Consensus 99 ~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~A 178 (466)
T 2xfg_A 99 YEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETS 178 (466)
T ss_dssp HHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHH
T ss_pred HHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CCchHHHHHHHHHHHHHcCchHHHHHH
Q 043219 178 AALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS-SGYSDDLLWAATWLYRATNEEYYLKYV 256 (591)
Q Consensus 178 AalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~-~~~~De~~wAAaeLy~aTgd~~Yl~~~ 256 (591)
||||+||||||++||+||++||++||++|+||++||+.|.. +..+++|++ +++.||++|||+|||+||||++|++++
T Consensus 179 AAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a 256 (466)
T 2xfg_A 179 AALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--TAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKA 256 (466)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--CTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--CccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999999999999999999998843 446789998 999999999999999999999999999
Q ss_pred HHhhhhcCC----CCC-CcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCC
Q 043219 257 VDNAEYMGG----TGW-AVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGG 331 (591)
Q Consensus 257 ~~~~~~~~~----~~~-~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g 331 (591)
+.+...++. ..+ ....|+||+|..|+++||+++. ++...+ ++.++..++.++| +.+++++++||+|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~tp~G 327 (466)
T 2xfg_A 257 ESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDNGKY---KEAIERHLDWWTT----GYNGERITYTPKG 327 (466)
T ss_dssp HHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSSCHH---HHHHHHHHHHHTT----CBTTBCCCBCTTS
T ss_pred HHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCcHHH---HHHHHHHHHHHHh----ccCCCccccCCcc
Confidence 987654431 111 1136899999999999998764 222122 3344445555543 3456889999999
Q ss_pred ceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccc
Q 043219 332 LMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVH 411 (591)
Q Consensus 332 ~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pH 411 (591)
++|...|||++|++|.+||+++|++++. |. ..++.+|+++|++|||||||+| ++|||||||+|+|++||
T Consensus 328 l~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pH 396 (466)
T 2xfg_A 328 LAWLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPH 396 (466)
T ss_dssp CBCCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCS
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCc
Confidence 9999999999999999999999998752 11 1236789999999999999999 99999999999999999
Q ss_pred cccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccC
Q 043219 412 HRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGS 491 (591)
Q Consensus 412 HR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 491 (591)
||+|+|+.. .+.+.+.|+|++|+|+||||||..|+|.|+|.+|++||||||||||||++||+|...
T Consensus 397 HR~ss~~~~--------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~ 462 (466)
T 2xfg_A 397 HRTAHGSWA--------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKL 462 (466)
T ss_dssp CHHHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CchhccCcc--------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHH
Confidence 999988521 234567889999999999999999999999999999999999999999999999876
Q ss_pred CC
Q 043219 492 SK 493 (591)
Q Consensus 492 ~~ 493 (591)
.+
T Consensus 463 ~g 464 (466)
T 2xfg_A 463 YG 464 (466)
T ss_dssp HT
T ss_pred cC
Confidence 44
No 3
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=3.4e-114 Score=933.39 Aligned_cols=430 Identities=44% Similarity=0.797 Sum_probs=390.9
Q ss_pred hhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHhHH
Q 043219 23 EYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRK 102 (591)
Q Consensus 23 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~~ 102 (591)
.++|.++|++||+||++||||++|++++++||++||++||++.++||+|||||||||+||++|+|+++++|+|+++||++
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~ 81 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA 81 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHH
Q 043219 103 EITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAA 182 (591)
Q Consensus 103 ~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~ 182 (591)
.++++|++||||||||||+|||||||+.+|.||+|||++..||.+|.+||+++++|++|+++.++|+|++++++|||||+
T Consensus 82 ~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~ 161 (433)
T 1ks8_A 82 GYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAA 161 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhhhh
Q 043219 183 SAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNAEY 262 (591)
Q Consensus 183 As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~~~ 262 (591)
||||||++||+||++||++||++|+||++||+.|.++++..+++|+++++.||++|||+|||++|||++|+++++++...
T Consensus 162 as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~ 241 (433)
T 1ks8_A 162 ASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241 (433)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998777667789999999999999999999999999999999987665
Q ss_pred cCCCCCCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceeccccchHH
Q 043219 263 MGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYVREWNNMQ 342 (591)
Q Consensus 263 ~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~~~Wgs~~ 342 (591)
++...+ ...|+|+++..|++++|+++. .+ +++++.++.+++.++. .+..||+|++|...|||++
T Consensus 242 ~~~~~~-~~~~~Wd~~~~g~~~lla~~~--~~--------~~~~~~~~~~~~~~~~-----~~~~tp~Gl~~~~~WGs~~ 305 (433)
T 1ks8_A 242 FGLQNW-GGGLNWDSKVSGVQVLLAKLT--NK--------QAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLR 305 (433)
T ss_dssp TTGGGS-CCCCCSSCCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHHHH-----TSCBCTTSCBCCCSTTHHH
T ss_pred cCcCcC-cCCcCccchhhHHHHHHhhcc--Ch--------HHHHHHHHHHHHHHHh-----cCCcCCCCceeecCCchhH
Confidence 543222 347999999999999988763 11 2344455555554442 2467899999999999999
Q ss_pred HHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCccccccc
Q 043219 343 YASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYN 422 (591)
Q Consensus 343 ~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~ 422 (591)
|++|.+|++++++++. .++.+|+++|++|||||||+| ++|||||||+|+|++||||+|++|.
T Consensus 306 ~~~n~a~l~~~~~~~~-------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~--- 367 (433)
T 1ks8_A 306 HAANAAFIMLEAAELG-------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPP--- 367 (433)
T ss_dssp HHHHHHHHHHHHHHTT-------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCC---
T ss_pred HHHHHHHHHHHHHhcC-------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCC---
Confidence 9999999999998861 257899999999999999998 7899999999999999999999975
Q ss_pred CCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccC
Q 043219 423 LHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGS 491 (591)
Q Consensus 423 ~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 491 (591)
.+..|..+ +++++.|+|++|+|+||||||..|+|+|+|.+|++||||||||||||++||+|...
T Consensus 368 --~~~~c~~~---~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 368 --APATCDWN---TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp --TTSCCSHH---HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred --cccccccc---ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 24588765 47888999999999999999999999999999999999999999999999999754
No 4
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=4.6e-113 Score=957.22 Aligned_cols=474 Identities=37% Similarity=0.611 Sum_probs=412.5
Q ss_pred hhhHHHHHHHHHHhHHHhcCCCCCCCCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHhHH
Q 043219 23 EYNYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRK 102 (591)
Q Consensus 23 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~~ 102 (591)
.++|.++|++||+||++||||++|+.++++||++||++||++.++||+|||||||||+||++|||+++++|+|+++||++
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~~ 82 (614)
T 1g87_A 3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKD 82 (614)
T ss_dssp CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHH
Q 043219 103 EITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAA 182 (591)
Q Consensus 103 ~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~ 182 (591)
.|++++++||||||||||+|||||||+++|.||+||||+..||.+|.+||+|+.+|++|.+++++|+|++++++|||||+
T Consensus 83 ~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAa 162 (614)
T 1g87_A 83 AYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLAS 162 (614)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHhccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhhhh
Q 043219 183 SAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNAEY 262 (591)
Q Consensus 183 As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~~~ 262 (591)
||||||++||+||++||++||++|+||++||+.+. .+..+++|+++++.||++|||+|||+||||++|+++++++...
T Consensus 163 AS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~ 240 (614)
T 1g87_A 163 AAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAG--YTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPN 240 (614)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHTGGG
T ss_pred HHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999874 3446789999999999999999999999999999999987654
Q ss_pred cCC----CCC-CcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceeccc
Q 043219 263 MGG----TGW-AVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYVRE 337 (591)
Q Consensus 263 ~~~----~~~-~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 337 (591)
++. ..+ ....|+||++..|+++||+++.. + ..|++.++.+++.+++..+++++++||+|++|...
T Consensus 241 ~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~ 310 (614)
T 1g87_A 241 WGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTN--K--------QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQ 310 (614)
T ss_dssp SCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCS
T ss_pred hccccccccccccCCcCccchHHHHHHHHHhccC--c--------HHHHHHHHHHHHHhhhccCCCccccCCCCceeccC
Confidence 431 111 11368999999999999987642 2 13444555555444444567889999999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcc
Q 043219 338 WNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSM 417 (591)
Q Consensus 338 Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~ 417 (591)
|||+||++|.+||+++|++++. | +..++.+|+++|++|||||||+| ++|||||||+|+|++||||+|+|
T Consensus 311 Wgs~~~~~n~afl~~~y~~~~~-------~--~~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~ 379 (614)
T 1g87_A 311 WGSLRHATTQAFLAGVYAEWEG-------C--TPSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHG 379 (614)
T ss_dssp SSHHHHHHHHHHHHHHHHHSTT-------S--CHHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHHhhC-------C--CccCHHHHHHHHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhhcc
Confidence 9999999999999999999752 2 11236789999999999999998 78999999999999999999988
Q ss_pred cccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCCCC-C-
Q 043219 418 ASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSKT-S- 495 (591)
Q Consensus 418 ~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~~-~- 495 (591)
+.. .+.+.+.|+|++|+|+||||||..|+|.|+|.+|++||||||||||||++||+|....++ |
T Consensus 380 ~~~--------------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~~~~ 445 (614)
T 1g87_A 380 SWT--------------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGGDPI 445 (614)
T ss_dssp CSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred Ccc--------------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHHHHHHhcCCCcC
Confidence 531 234567889999999999999999999999999999999999999999999999876332 1
Q ss_pred ----------CCCeeEEeeccccccCCCceEEEEEEEEEeCCC-CCC--cceEEE
Q 043219 496 ----------ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQ-KPI--TDLKLT 537 (591)
Q Consensus 496 ----------~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~-~~i--~~w~~~ 537 (591)
...+.|+..+.++ +..+.+..+.|+|++. .++ ++++++
T Consensus 446 ~~~~~~~~~~~~e~~vea~in~s----~~~~~~~~~~i~N~s~~pa~~l~~l~~R 496 (614)
T 1g87_A 446 PNFKAIEKITNDEVIIKAGLNST----GPNYTEIKAVVYNQTGWPARVTDKISFK 496 (614)
T ss_dssp TTCCBCCCCCSCSEEEEEEEEEE----ETTEEEEEEEEEECCCTTCCCBCSEEEE
T ss_pred CCCCCCCCCCCCceEEEEEeccC----CCCceEEEEEEEECCCCCCeecCceEEE
Confidence 1224455544322 2346899999999988 455 677775
No 5
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=4e-113 Score=926.21 Aligned_cols=425 Identities=36% Similarity=0.652 Sum_probs=378.9
Q ss_pred chhhHHHHHHHHHHhHHHhcCCCCCC-CCCCcCCCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHh
Q 043219 22 AEYNYDEALDKTFLFFEAQRSGKLQE-NQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEY 100 (591)
Q Consensus 22 ~~~~Y~~~l~~sl~ff~~QRsG~lp~-~~~~~W~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef 100 (591)
+.++|.++|++||+||++||||++|+ .++++||++||++||++.++||+|||||||||+||++|+|+++++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 46899999999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcce-eecCCCCCChHHHHHHHHH
Q 043219 101 RKEITELNQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREA-FKLDQYHPGSDLAGETAAA 179 (591)
Q Consensus 101 ~~~~~s~~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~-~~~~~~~p~s~~a~~~AAa 179 (591)
++.|++.+++||||||||||+|||||||+++|.||+||||+..||.+|.+||+|+.+|++ |.+++++|+|++++++|||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa 161 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA 161 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 180 LAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 180 lA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
||+||||||++||+||++||++||++|+||++||+.+. ..++|+++++.||++|||+|||++|||++|++++++.
T Consensus 162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-----~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~ 236 (441)
T 1ia6_A 162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-----GQSFYQATSFGDDLAWAATWLYTATNDSTYITDAEQF 236 (441)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-----CTTTSCCCCSHHHHHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCchhHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998643 4689999999999999999999999999999999875
Q ss_pred hhhc---CCCC-CCcccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccCCCCceec
Q 043219 260 AEYM---GGTG-WAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLTPGGLMYV 335 (591)
Q Consensus 260 ~~~~---~~~~-~~~~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t~~g~~~~ 335 (591)
.... +... .....|+||++..|+++||+++. ++ . .+++.++.+++.++ .++++||+|+.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~-~-------~~~~~~~~~~~~~~-----~~~~~tp~Gl~~~ 301 (441)
T 1ia6_A 237 ITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQIT--GK-Q-------IYKDAIEFNFNYWK-----TQVTTTPGGLKWL 301 (441)
T ss_dssp TTC------CGGGCSSCSSSSCCHHHHHHHHHHHH--CC-H-------HHHHHHHHHHHHHH-----HTSCBCTTSCBCC
T ss_pred HhhhhhcccccccCCCcCCccchHHHHHHHHHhcc--Cc-H-------HHHHHHHHHHHHHH-----hhcccCCCCceec
Confidence 4321 0000 01236899999999999988763 21 1 23333333333322 2478899999999
Q ss_pred cccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccC
Q 043219 336 REWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGS 415 (591)
Q Consensus 336 ~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s 415 (591)
..|||++|++|++||+++|++++ .+++|+++|++|||||||+||+++|||||||+|+|++||||++
T Consensus 302 ~~WGs~~~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s 367 (441)
T 1ia6_A 302 SNWGVLRYAAAESMVMLVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAA 367 (441)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHH
T ss_pred CCcchHHHHHHHHHHHHHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhh
Confidence 99999999999999999999874 3679999999999999999999999999999999999999999
Q ss_pred cccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhccCCCC
Q 043219 416 SMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSKT 494 (591)
Q Consensus 416 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~~ 494 (591)
+|+.. .+++.+.|+|++|+|+||||||..|+|+|+|.+|++||||||||||||++||+|....++
T Consensus 368 ~~~~~--------------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~~ 432 (441)
T 1ia6_A 368 NGYTY--------------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFGG 432 (441)
T ss_dssp HCCCC--------------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC-
T ss_pred ccCCc--------------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcCC
Confidence 98531 245678889999999999999999999999999999999999999999999999987653
No 6
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=4.2e-113 Score=958.04 Aligned_cols=442 Identities=33% Similarity=0.568 Sum_probs=389.3
Q ss_pred cccchhhHHHHHHHHHHhHHHhcCCCCCC-CCCCcCCCCCCCCCC--------------------------CCCcccccc
Q 043219 19 ADAAEYNYDEALDKTFLFFEAQRSGKLQE-NQRVKWRGDSGLKDG--------------------------SLQGVDLVG 71 (591)
Q Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~-~~~~~W~~~s~l~Dg--------------------------~~~~~DlsG 71 (591)
.+.+.++|.++|++||+||++||||++|+ .++++||++||++|+ ++.++||+|
T Consensus 33 ~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsG 112 (611)
T 2yik_A 33 SAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSG 112 (611)
T ss_dssp -----CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCC
T ss_pred cccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCCCcccCCC
Confidence 35667999999999999999999999987 889999999999998 677899999
Q ss_pred ceecCCCCcccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhh-----ccCCCeEEEEeCCCCCCCC
Q 043219 72 GYYDAGDHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKA-----HTQPNVLWAQVGDGDSDHY 146 (591)
Q Consensus 72 GWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm-----~~~~g~~y~qVgd~~~dh~ 146 (591)
||||||||+||++|+|+++++|+|+++||++.|++++++||||||||||+|||||| |+++|.||+||||+..||.
T Consensus 113 GwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~ 192 (611)
T 2yik_A 113 GFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHA 192 (611)
T ss_dssp SBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTT
T ss_pred CceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999 7889999999999999999
Q ss_pred CCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCC
Q 043219 147 CWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQF 226 (591)
Q Consensus 147 ~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~ 226 (591)
+|.+||+++++|++|.+++++|+|++++++|||||+||||||++||+||++||++||++|+||++||+.|.++.+..+++
T Consensus 193 ~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~ 272 (611)
T 2yik_A 193 FWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGY 272 (611)
T ss_dssp CCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTT
T ss_pred CCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999998877778899
Q ss_pred CCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHHHhhcC-CCchhHHHHHHH
Q 043219 227 YTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEG-RGGAYTATLKQY 305 (591)
Q Consensus 227 Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a~~~~~~-~~~~~~~~~~~~ 305 (591)
|+++++.||++|||+|||++|||++|+++++++...++...| .|+||++..|+++||+++.... +.. ....+.|
T Consensus 273 Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~---~~~Wd~~~~g~~~lLa~~~~~~~~~~--~~~~~~y 347 (611)
T 2yik_A 273 YGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYAPPGW---IHCWNDVWSGTACILAEINDLYDKDS--QNFEDRY 347 (611)
T ss_dssp SCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTSTTTS---CSBTTBCHHHHHHHHHHHHHHHSTTS--SHHHHHH
T ss_pred CCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCc---cCccccchHHHHHHHHhccccccccc--cchhHHH
Confidence 999999999999999999999999999999887544443333 5899999999999988764311 100 0112334
Q ss_pred HHHHHHH----------HHHhhccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChH
Q 043219 306 KAKADYF----------ACACVQKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQ 375 (591)
Q Consensus 306 ~~~a~~~----------~~~~~~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (591)
++.++.. +|..+++.+++++++||+|+.|...||+++|++|++||+++|++++. ...+
T Consensus 348 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~~~afl~~~ya~~~~------------~~~~ 415 (611)
T 2yik_A 348 KRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHHG------------DTPS 415 (611)
T ss_dssp HHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCSTTHHHHHHHHHHHHHHHHHTTT------------SSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCCchHHHHHHHHHHHHHHHHhcC------------ccHH
Confidence 4443332 23333233567899999999999999999999999999999998752 2357
Q ss_pred HHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCC
Q 043219 376 QLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGP 455 (591)
Q Consensus 376 ~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGP 455 (591)
+|+++|++|||||||+||+++|||||||+|+|++||||+|+|+. +.+.+.|+|++|+|+|||||
T Consensus 416 ~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~----------------~~~~p~p~~~vl~GaLVGGP 479 (611)
T 2yik_A 416 KYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK----------------DANDSSPHKYVLYGALVGGP 479 (611)
T ss_dssp HHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS----------------CTTCCSCCSSCCTTCBCSCC
T ss_pred HHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc----------------cccCCCCCCCCCCceeecCC
Confidence 89999999999999999999999999999999999999998852 24467889999999999999
Q ss_pred CCCCcccCCCCccccCcccccccchhhhhhhhhccCCC
Q 043219 456 DQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSSK 493 (591)
Q Consensus 456 n~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~ 493 (591)
|..|+|.|+|++|++||||||||||||++||+|....+
T Consensus 480 d~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~ 517 (611)
T 2yik_A 480 DASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFG 517 (611)
T ss_dssp CTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHC
T ss_pred CcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999987644
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=2.3e-100 Score=859.92 Aligned_cols=425 Identities=19% Similarity=0.234 Sum_probs=368.7
Q ss_pred hhhccccchhhHHHHHHHHHHhHHHhcCC-CCCCCCCCc-CCCCCCCCCC--------CCCccccccceecCCCCccccc
Q 043219 15 FKAAADAAEYNYDEALDKTFLFFEAQRSG-KLQENQRVK-WRGDSGLKDG--------SLQGVDLVGGYYDAGDHVKFGL 84 (591)
Q Consensus 15 ~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG-~lp~~~~~~-W~~~s~l~Dg--------~~~~~DlsGGWyDAGD~~Ky~~ 84 (591)
.|..+.|++++|.++|++||+||++|||| .||+.++++ ||+++++.|+ ++.++||+|||||||||+||++
T Consensus 118 ~S~~F~I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~ 197 (639)
T 1clc_A 118 KSVNFKIAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVV 197 (639)
T ss_dssp ECCCEEECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHH
T ss_pred ccCCeeechhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCc
Confidence 45678899999999999999999999999 699999998 9888777665 5678999999999999999999
Q ss_pred chHHHHHHHHHHHHHhHHHHHh--------ccchHHHHHHHHHHHHHhhhhc-cCC-CeEEEEeCCCCCCCCCCCCCCCC
Q 043219 85 PAAFTVTMLAWGTIEYRKEITE--------LNQMGHALWAIRWGTDYFMKAH-TQP-NVLWAQVGDGDSDHYCWERAEDM 154 (591)
Q Consensus 85 ~~a~s~~~L~~a~~ef~~~~~s--------~~~~pdiLdE~kwglDwllkm~-~~~-g~~y~qVgd~~~dh~~W~~Pe~~ 154 (591)
|||+++++|+|+++||++.|+. +|++||||||||||+||||||| +++ |.+|||||++.+||. .+||+|
T Consensus 198 p~a~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~ 275 (639)
T 1clc_A 198 NAGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENE 275 (639)
T ss_dssp HHHHHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGC
T ss_pred cHHHHHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhc
Confidence 9999999999999999999976 8999999999999999999997 467 999999999988884 999999
Q ss_pred CCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCcccCCCCCCCCch
Q 043219 155 TTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGL-YDDSIKCAKQFYTSSGYS 233 (591)
Q Consensus 155 ~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~-y~~~~~~~~g~Y~~~~~~ 233 (591)
+.+|+++. ++|++++++|||||+||||||++||+||++||++||++|+||++||+. |.++.+..+++|+++++.
T Consensus 276 ~~~R~~~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~ 350 (639)
T 1clc_A 276 HDERFFVP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDA 350 (639)
T ss_dssp CSCCEEEE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSH
T ss_pred CCCceEec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcc
Confidence 99999887 679999999999999999999999999999999999999999999998 677766678999999999
Q ss_pred HHHHHHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHH-HHhhcCCCchhHHHHHHHHHHHHHH
Q 043219 234 DDLLWAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLS-KVLMEGRGGAYTATLKQYKAKADYF 312 (591)
Q Consensus 234 De~~wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l~a-~~~~~~~~~~~~~~~~~~~~~a~~~ 312 (591)
||++|||+|||+||||++|+++++++...++.. ....|+||++..+.+++++ +..........+..++.+++.++.+
T Consensus 351 DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~--~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~ 428 (639)
T 1clc_A 351 DDRLWAAAEMWETLGDEEYLRDFENRAAQFSKK--IEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSI 428 (639)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHTCSSS--CCSSCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccc--cCCCCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876544321 1123599999887777766 2111111112356677888899998
Q ss_pred HHHhhccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCC
Q 043219 313 ACACVQKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKN 392 (591)
Q Consensus 313 ~~~~~~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~N 392 (591)
++.. . ..+++++++ +...||++++++|.+|+++++.++. ++.+|+++|++|||||||+|
T Consensus 429 ~~~~-~-~~~~g~~~~-----~~~~WGsn~~~~~~a~~~~~a~~l~--------------~~~~~~~~A~~qidYiLG~N 487 (639)
T 1clc_A 429 VRTS-Q-NHGYGRTLG-----TTYYWGCNGTVVRQTMILQVANKIS--------------PNNDYVNAALDAISHVFGRN 487 (639)
T ss_dssp HHHH-H-TSTTCCTTT-----TCCCTTHHHHHHHTHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCS
T ss_pred HHhc-c-CCCCCcccC-----CCCCCchHHHHHHHHHHHHHHHhcC--------------CHHHHHHHHHHHHhhccCCC
Confidence 8653 3 356666654 3468999999999999998876642 46799999999999999999
Q ss_pred CCCCceEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCC-CCcccCCCCccccC
Q 043219 393 PNSMSYLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQ-NDKFIDDRSNYEQT 471 (591)
Q Consensus 393 p~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~-~d~y~D~~~~y~~N 471 (591)
|+++|||||||.|+|++||||.+++++ .+++++|+||||||. .|+|.|+|.+|++|
T Consensus 488 P~~~SyvvG~G~~~p~~pHHR~s~~~~-----------------------~~~~~~GalVGGP~~~~d~y~D~r~~y~~n 544 (639)
T 1clc_A 488 YYNRSYVTGLGINPPMNPHDRRSGADG-----------------------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTN 544 (639)
T ss_dssp TTCCCSBTTSSSSCCSSCBCHHHHHSS-----------------------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTS
T ss_pred CCCceEEEecCCCCCCCCcchhhccCC-----------------------CCCCCCeeeecCCCccccccccCcccceec
Confidence 999999999999999999999876531 246799999999999 99999999999999
Q ss_pred cccccccchhhhhhhhhccCC
Q 043219 472 EPTLTACAPLVGLFSKLQGSS 492 (591)
Q Consensus 472 EvaId~NA~lv~~la~l~~~~ 492 (591)
||+|||||+|+++++++....
T Consensus 545 E~~~~~nA~~v~~la~~~~~~ 565 (639)
T 1clc_A 545 EIAINWNAALIYALAGFVNYN 565 (639)
T ss_dssp BCCHHHHHHHHHHHHTTTTCC
T ss_pred cccccchHHHHHHHHHhhhcc
Confidence 999999999999999998654
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=2.9e-100 Score=843.59 Aligned_cols=424 Identities=19% Similarity=0.282 Sum_probs=362.8
Q ss_pred HhhhccccchhhHHHHHHHHHHhHHHhcCCC-CCCCCCCcCCCCCCC-CC----CCCCccccccceecCCCCcccccchH
Q 043219 14 AFKAAADAAEYNYDEALDKTFLFFEAQRSGK-LQENQRVKWRGDSGL-KD----GSLQGVDLVGGYYDAGDHVKFGLPAA 87 (591)
Q Consensus 14 ~~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~-lp~~~~~~W~~~s~l-~D----g~~~~~DlsGGWyDAGD~~Ky~~~~a 87 (591)
..|..+.|++++|.++|+++|+||++||||+ +|+.++++||+++++ +| |.+.++||+|||||||||+||++|||
T Consensus 76 ~~S~~F~I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a 155 (537)
T 3gzk_A 76 TLEARVVIHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAA 155 (537)
T ss_dssp TEEEEEEEETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHH
T ss_pred cccCCceeCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHH
Confidence 3556789999999999999999999999998 999999999887654 33 55678999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHH-------hccc--hHHHHHHHHHHHHHhhhhcc-CCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 043219 88 FTVTMLAWGTIEYRKEIT-------ELNQ--MGHALWAIRWGTDYFMKAHT-QPNVLWAQVGDGDSDHYCWERAEDMTTP 157 (591)
Q Consensus 88 ~s~~~L~~a~~ef~~~~~-------s~~~--~pdiLdE~kwglDwllkm~~-~~g~~y~qVgd~~~dh~~W~~Pe~~~~~ 157 (591)
+++++|+|++++|++.|+ ++|+ +||||||||||+|||||||+ ++|.+|||||+..+. ..|.+||+|+++
T Consensus 156 ~t~~~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~-g~~~~Pe~~~~~ 234 (537)
T 3gzk_A 156 KAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFP-PLDTRPEDDDAP 234 (537)
T ss_dssp HHHHHHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCC-CTTCCGGGCCSC
T ss_pred HHHHHHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcC-CCCcCcccCCCc
Confidence 999999999999999985 5788 99999999999999999997 669999999985321 123899999999
Q ss_pred cceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCcccCCCCCCCCchHHH
Q 043219 158 REAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGL-YDDSIKCAKQFYTSSGYSDDL 236 (591)
Q Consensus 158 R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~-y~~~~~~~~g~Y~~~~~~De~ 236 (591)
|+++.+ ++.+++++|||||+||||||++||+||++||++||++|+||++||+. |.++.+...++|+++++.||+
T Consensus 235 R~~~~~-----~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del 309 (537)
T 3gzk_A 235 LVLSPI-----SYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDEL 309 (537)
T ss_dssp EEECCB-----CHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHH
T ss_pred ceEeec-----CCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHH
Confidence 999874 47789999999999999999999999999999999999999999986 556666678999999999999
Q ss_pred HHHHHHHHHHcCchHHHHHHHHhhhhcCCCCCCcccccccchhHHHHH--HHHHHhhcCCCchhHHHHHHHHHHHHHHHH
Q 043219 237 LWAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQI--LLSKVLMEGRGGAYTATLKQYKAKADYFAC 314 (591)
Q Consensus 237 ~wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~--l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~ 314 (591)
+|||+|||++|||++|+++++++.... .. ..|+||++..+.++ |+++... .+....+.+++.+++.+|.++.
T Consensus 310 ~wAA~~Ly~aTgd~~Yl~~a~~~~~~~--~~---~~~~Wd~~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~ad~~~~ 383 (537)
T 3gzk_A 310 LWASCALLRMTGDSAWARVCEPLLDLD--LP---WELGWADVALYGVMDYLRTPRAA-VSDDVRNKVKSRLLRELDALAA 383 (537)
T ss_dssp HHHHHHHHHHHCCGGGHHHHHHHHHSC--CC---CCCSSSCCHHHHHHHHHTSCGGG-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHhhhcc--CC---CccchHHhHHHHHHHHHhCcccc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998876421 12 36899999876654 3333211 0112245667788888998863
Q ss_pred HhhccCCCcccccCCCCceeccccchHHHHHHHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHH-HhhhhhhcCCCC
Q 043219 315 ACVQKNAGYNVHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFA-KSQADYILGKNP 393 (591)
Q Consensus 315 ~~~~~~~~~~~~~t~~g~~~~~~Wgs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a-~~qldYiLG~Np 393 (591)
..+ .++++++++++++ .|||+++++|.+|++++++++. .+.+|+++| ++|||||||+||
T Consensus 384 -~~~-~~~~g~~~~~~~~----~WGsn~~~~n~a~~l~~a~~~~--------------~~~~y~~~aa~~qidYiLG~NP 443 (537)
T 3gzk_A 384 -MAE-SHPFGIPMRDDDF----IWGSNMVLLNRAMAFLLAEGVG--------------VLHPAAHTVAQRAADYLFGANP 443 (537)
T ss_dssp -HHH-HSTTCCSCCGGGC----CTTHHHHHHHHHHHHHHHGGGT--------------CCCTTHHHHHHHHHHHHBTCST
T ss_pred -hcc-CCCCceeecCCCC----cccchHHHHHHHHHHHHHhhcc--------------CCHHHHHHHHHHhHHHhcCCCC
Confidence 333 3678888888775 6899999999999998887653 345799999 999999999999
Q ss_pred CCCceEEeeCCCCccccccccCcccccccCCCCcccCcccccccccCCCCCCcccceeecCCCCC---------------
Q 043219 394 NSMSYLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQN--------------- 458 (591)
Q Consensus 394 ~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~--------------- 458 (591)
+++|||||||+|+|++||||++++++ .++|+||+||||||..
T Consensus 444 ~~~SyVvG~G~~~p~~pHHR~s~~~~-----------------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~ 500 (537)
T 3gzk_A 444 LGQCYVTGFGQRPVRHPHHRPSVADD-----------------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPA 500 (537)
T ss_dssp TCCBCBBTCSSSCBCSCBCHHHHHHC-----------------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCG
T ss_pred CCceeEecCCCCCCCCCcchhhhcCC-----------------------CCCCCCCCCccCCCcccccchhhhcccCCCc
Confidence 99999999999999999999987642 3468999999999976
Q ss_pred -CcccCCCCccccCcccccccchhhhhhhhhccCC
Q 043219 459 -DKFIDDRSNYEQTEPTLTACAPLVGLFSKLQGSS 492 (591)
Q Consensus 459 -d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~ 492 (591)
|+|.|+|.+|++||||||||||||++||+|.+..
T Consensus 501 ~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~ 535 (537)
T 3gzk_A 501 MEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEAR 535 (537)
T ss_dssp GGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCC
T ss_pred ccCcCCCCccccccccchHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999999998764
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.1e-97 Score=835.73 Aligned_cols=447 Identities=21% Similarity=0.293 Sum_probs=368.9
Q ss_pred hhhccccchhhHHHHHHHHHHhHHHhcCCC---CCCCCCCcCCCCCCC-C--------C--------------CCCCccc
Q 043219 15 FKAAADAAEYNYDEALDKTFLFFEAQRSGK---LQENQRVKWRGDSGL-K--------D--------------GSLQGVD 68 (591)
Q Consensus 15 ~~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~---lp~~~~~~W~~~s~l-~--------D--------------g~~~~~D 68 (591)
.|..+.|++++|.++|+++|+||++||||+ +|...++.||+++++ + | |.+.++|
T Consensus 90 ~S~~F~I~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~D 169 (609)
T 1ut9_A 90 YSHPFDIRKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKD 169 (609)
T ss_dssp BBCCEEECTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEEC
T ss_pred cccceEeCHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceec
Confidence 456788999999999999999999999996 566667789876444 3 3 3467899
Q ss_pred cccceecCCCCcccccchHHHHHHHHHHHHHhHHH-------H--------HhccchHHHHHHHHHHHHHhhhhccCCC-
Q 043219 69 LVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRKE-------I--------TELNQMGHALWAIRWGTDYFMKAHTQPN- 132 (591)
Q Consensus 69 lsGGWyDAGD~~Ky~~~~a~s~~~L~~a~~ef~~~-------~--------~s~~~~pdiLdE~kwglDwllkm~~~~g- 132 (591)
|+|||||||||+||++|||+++++|++.|++|+.. | |++|++||||||||||+|||||||..+|
T Consensus 170 l~GGwyDAGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g~ 249 (609)
T 1ut9_A 170 VTGGWYDAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKE 249 (609)
T ss_dssp CCCSBCCSSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTTT
T ss_pred CCCCeeeCCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999998888877531 2 5678999999999999999999997766
Q ss_pred --eEEEEeCCCCCCCCCC---CCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 043219 133 --VLWAQVGDGDSDHYCW---ERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFS 207 (591)
Q Consensus 133 --~~y~qVgd~~~dh~~W---~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~ 207 (591)
.+|.||+++..||..| .+||+|+++|++. .|+|++++++|||||+||||||++||+||++||++||++|+
T Consensus 250 ~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~ 324 (609)
T 1ut9_A 250 DPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQ 324 (609)
T ss_dssp CGGGTTCEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred cceEEEEecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH
Confidence 7778888888889666 4899999999874 38999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCC----cccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhhh------hcC------C-CCCCc
Q 043219 208 FADRFRGLYDDSI----KCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNAE------YMG------G-TGWAV 270 (591)
Q Consensus 208 ~a~~~~~~y~~~~----~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~~------~~~------~-~~~~~ 270 (591)
||++||+.|.+.+ ...+++|+++++.||++|||+|||+||||++|+++++++.. .++ . .....
T Consensus 325 fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (609)
T 1ut9_A 325 AALKHPDIYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLW 404 (609)
T ss_dssp HHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCB
T ss_pred HHHhCcccccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCc
Confidence 9999999987653 23578999999999999999999999999999999988643 111 0 01123
Q ss_pred ccccccchhHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHhhccCCCcccccC-----CCCceeccccchHHHHH
Q 043219 271 KEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYNVHLT-----PGGLMYVREWNNMQYAS 345 (591)
Q Consensus 271 ~~~~Wd~~~~g~~~l~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~t-----~~g~~~~~~Wgs~~~~~ 345 (591)
..|+||+|..+++++|+.+...-........++.+++.+|.++|.... ++++++++ |+|+ .|||++|++
T Consensus 405 ~~f~Wd~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~--~~~g~~~~~~~~t~gg~----~WGs~~~~~ 478 (609)
T 1ut9_A 405 GCFTWGTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEE--QGYRLPIKQAEDERGGY----PWGSNSFIL 478 (609)
T ss_dssp SSCCSSCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHT--CTTCCSCCCCSSSSCSC----CTTHHHHHH
T ss_pred cccchhhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhcc--CCCCccccccccCCCCc----ccccCHHHH
Confidence 479999999999998875421001112345677889999999987543 55666654 5665 689999999
Q ss_pred HHHHHHHHHHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCccccccc-CC
Q 043219 346 AAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYN-LH 424 (591)
Q Consensus 346 n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~-~~ 424 (591)
|.+|+++++.++. +..+|+++|++|||||||+||+++|||||||+|+|++||||+++.+.... +.
T Consensus 479 n~a~~~~~a~~~~--------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~ 544 (609)
T 1ut9_A 479 NQMIVMGYAYDFT--------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPA 544 (609)
T ss_dssp HHHHHHHHHHHHH--------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCC
T ss_pred HHHHHHHHHHHhc--------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCC
Confidence 9999998887764 35789999999999999999999999999999999999999865432221 22
Q ss_pred CCcccCcccccccccCCCCCCcccceeecCCCCCCcccCCCCccccCcccccccchhhhhhhhhcc
Q 043219 425 SPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLFSKLQG 490 (591)
Q Consensus 425 ~~~~c~~g~~~~~~~~~~~~~~l~GaLvGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~ 490 (591)
.+.+|..|. .++..++|++ .|+|||||+..|+|.|+|++|++||||||||||||++||+|.+
T Consensus 545 ~~~G~l~Gg---p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~ 606 (609)
T 1ut9_A 545 PPPGIISGG---PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQ 606 (609)
T ss_dssp CCSSCBCCC---CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC---CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHh
Confidence 567886653 3344556665 8999999999999999999999999999999999999999864
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.5e-67 Score=580.34 Aligned_cols=400 Identities=20% Similarity=0.219 Sum_probs=289.3
Q ss_pred hhccccchhhH-HHHHHHHHHhHHHhcCCCC--CCCCCCcCCCCCCCCCCCCCccccccceecC-CCCcccccchHHHH-
Q 043219 16 KAAADAAEYNY-DEALDKTFLFFEAQRSGKL--QENQRVKWRGDSGLKDGSLQGVDLVGGYYDA-GDHVKFGLPAAFTV- 90 (591)
Q Consensus 16 ~~~~~~~~~~Y-~~~l~~sl~ff~~QRsG~l--p~~~~~~W~~~s~l~Dg~~~~~DlsGGWyDA-GD~~Ky~~~~a~s~- 90 (591)
|..+.|++++| .++++++|+||++||||.+ |.+.+++|+++ +.++||+|||||| |||+||++|||||+
T Consensus 86 S~pF~I~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~ 158 (586)
T 3h7l_A 86 SSTFTVGEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANY 158 (586)
T ss_dssp CCCEEEETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSS
T ss_pred eCCeEEccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhh
Confidence 45688999997 8999999999999999974 56778899863 5689999999999 99999999999887
Q ss_pred ------HHHHHHHHHhHHHHHhc-----cchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcc
Q 043219 91 ------TMLAWGTIEYRKEITEL-----NQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPRE 159 (591)
Q Consensus 91 ------~~L~~a~~ef~~~~~s~-----~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~ 159 (591)
++|+|+++++.+.+... .++||||||||||+|||||||+.+|.||+||||+ |..+ +++|.
T Consensus 159 ~npqQ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qVgd~------W~~d---~~~R~ 229 (586)
T 3h7l_A 159 LNPQQTPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTVFDK------WSKD---TAQRE 229 (586)
T ss_dssp CCCCCHHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEEECT------TCCC---GGGCE
T ss_pred cccchhhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEecCC------CCCC---CCccc
Confidence 47778777766665432 2489999999999999999999999999999984 6432 44565
Q ss_pred e--eecCCCCC-------ChHHHHHHHHHHHHHHHhccCCCHHH-HHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC
Q 043219 160 A--FKLDQYHP-------GSDLAGETAAALAASAIAFKPYNSSY-SELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS 229 (591)
Q Consensus 160 ~--~~~~~~~p-------~s~~a~~~AAalA~As~vfk~~D~~y-A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~ 229 (591)
+ |.+...++ .+..++.+|||||+|||||+ |++| +++||++|+++|+||++||+.|.++ ++
T Consensus 230 ~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--------g~ 299 (586)
T 3h7l_A 230 ICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND--------GE 299 (586)
T ss_dssp EEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--------SC
T ss_pred cccccCCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC--------CC
Confidence 4 32211111 13456789999999999998 7889 9999999999999999998866432 24
Q ss_pred CCchHHH--HHHHHHHHHHcCchHHHHHHHHhhhhcCCCCC--Ccccccccc-----------hhHHH--HHHHHHHhhc
Q 043219 230 SGYSDDL--LWAATWLYRATNEEYYLKYVVDNAEYMGGTGW--AVKEFSWDN-----------KYAGV--QILLSKVLME 292 (591)
Q Consensus 230 ~~~~De~--~wAAaeLy~aTgd~~Yl~~~~~~~~~~~~~~~--~~~~~~Wd~-----------~~~g~--~~l~a~~~~~ 292 (591)
+++.||+ +|||+|||++|||.+||+++..+...+...-+ ....|.|.. ...++ ..|+......
T Consensus 300 ~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~ 379 (586)
T 3h7l_A 300 ENIIDEYCALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIE 379 (586)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHC
T ss_pred ccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhc
Confidence 6889999 99999999999999999999876543321101 112456763 12222 2222211122
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhhc------------------cCCCcccccCCCCceecccc-chHHHHHHHHHHHHH
Q 043219 293 GRGGAYTATLKQYKAKADYFACACVQ------------------KNAGYNVHLTPGGLMYVREW-NNMQYASAAAFLLSV 353 (591)
Q Consensus 293 ~~~~~~~~~~~~~~~~a~~~~~~~~~------------------~~~~~~~~~t~~g~~~~~~W-gs~~~~~n~a~l~~~ 353 (591)
++....+.+++.+++.++.++..... +..+|++++.+. .++.| |+|++++|.|+++++
T Consensus 380 ~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~---~~y~WqGsN~~~an~a~~~~~ 456 (586)
T 3h7l_A 380 DDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNE---SGYWWQGENARLGSLATMAYL 456 (586)
T ss_dssp CSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSST---TSSCCCCCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCC---CCCeeeChHHHHHHHHHHHHH
Confidence 22223455666677777754432211 123344444331 12479 999999999999999
Q ss_pred HHhhHHhhhcccCCCCCCCChHHHHHHHHhhhhhhcCCCCCCCceEEeeCCCCccccccccCcccccccCCCCcccCccc
Q 043219 354 YYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYNLHSPVGCVQGF 433 (591)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~~~~c~~g~ 433 (591)
+++++... ....+|+++|++|||||||+||+++|||||||+|+|+ ||.+..
T Consensus 457 a~~~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~~---------------- 507 (586)
T 3h7l_A 457 AQPHIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQYG---------------- 507 (586)
T ss_dssp SGGGCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGGT----------------
T ss_pred HHHhcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCcccC----------------
Confidence 98875210 0137899999999999999999999999999999876 786421
Q ss_pred ccccccCCCCCCcccceeecCCCCC--C----------cccCCCCccccCcccccccchhhh
Q 043219 434 ETWYRRNEGNPNVLHGALVGGPDQN--D----------KFIDDRSNYEQTEPTLTACAPLVG 483 (591)
Q Consensus 434 ~~~~~~~~~~~~~l~GaLvGGPn~~--d----------~y~D~~~~y~~NEvaId~NA~lv~ 483 (591)
.+ ++||.|+||||.. | ...|--.+|.-+|--|---|=|..
T Consensus 508 ---------~~-~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~ 559 (586)
T 3h7l_A 508 ---------FF-NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLL 559 (586)
T ss_dssp ---------BC-CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHH
T ss_pred ---------CC-CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHH
Confidence 12 2899999999864 1 223445678888877764443333
No 11
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=99.74 E-value=1.7e-18 Score=150.28 Aligned_cols=88 Identities=19% Similarity=0.288 Sum_probs=79.5
Q ss_pred CCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCC-C
Q 043219 497 NPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKP-G 569 (591)
Q Consensus 497 ~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~-G 569 (591)
++|+++|+++++|.+| ||++|+|+|+|+.+|++|+|+|++| |+++||++++++|+ ++++++||+.|+| |
T Consensus 1 ~gc~v~y~v~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G 76 (107)
T 3ndz_E 1 SAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANG 76 (107)
T ss_dssp CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTT
T ss_pred CccEEEEEEcccCCCC----EEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCC
Confidence 4799999999999999 9999999999999999999999997 89999999988884 5889999999999 9
Q ss_pred CeEEEEEEecCC-----Cceeeee
Q 043219 570 SQCTFVYVQGGP-----QAKVSVL 588 (591)
Q Consensus 570 ~s~~fG~i~~~~-----~a~~~v~ 588 (591)
++++|||++..+ |..++|.
T Consensus 77 ~s~~fGf~g~~~G~~~~P~~~~ln 100 (107)
T 3ndz_E 77 GTQSFGFNINYSGVLSKPTGFTVN 100 (107)
T ss_dssp EEEEEEEEEEECSSCCCCSCCEET
T ss_pred ccEEEEEEEeCCCCCCCCcEEEEC
Confidence 999999998742 6666654
No 12
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=99.69 E-value=2.6e-17 Score=143.97 Aligned_cols=89 Identities=22% Similarity=0.409 Sum_probs=79.4
Q ss_pred CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCCC
Q 043219 496 ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKPG 569 (591)
Q Consensus 496 ~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~G 569 (591)
...|+++|+ +++|.+| ||++|+|+|+|+++|++|+|+|+++ |++.||++++++|+ ++++++||+.|+||
T Consensus 5 ~~~c~v~y~-~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G 79 (110)
T 1exg_A 5 PAGCQVLWG-VNQWNTG----FTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAG 79 (110)
T ss_dssp CCCEEEECC-EEESSSE----EEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSS
T ss_pred CCcEEEEEE-eCCCCCC----EEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCC
Confidence 467999999 9999999 9999999999999999999999987 78999999988874 58999999999999
Q ss_pred CeEEEEEEecCC-----Cceeeeec
Q 043219 570 SQCTFVYVQGGP-----QAKVSVLS 589 (591)
Q Consensus 570 ~s~~fG~i~~~~-----~a~~~v~~ 589 (591)
++++|||++..+ |..++|.+
T Consensus 80 ~s~~fGf~~~~~g~~~~Pt~~~lnG 104 (110)
T 1exg_A 80 GTAQFGFNGSHTGTNAAPTAFSLNG 104 (110)
T ss_dssp EEEEEEEEEECSSSCCCCSCEEETT
T ss_pred cEEEEEEEEeCCCCCCCCceEEEcC
Confidence 999999998642 66666643
No 13
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=99.49 E-value=1.3e-14 Score=160.38 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=79.6
Q ss_pred CCCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCC
Q 043219 495 SENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKP 568 (591)
Q Consensus 495 ~~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~ 568 (591)
+.++|+++|+++++|++| ||++|+|+|+|+++|++|+|+|++| |+++||++++++|+ ++++++||+.|+|
T Consensus 379 ~~~~~~~~~~~~~~W~~g----~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~~~g~~~~~~~~~~n~~~~~ 454 (515)
T 3icg_A 379 PQSAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAA 454 (515)
T ss_dssp --CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECT
T ss_pred CCCceEEEEEEecCCCCc----cEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEEecCCeEEEecCccccccCC
Confidence 357899999999999999 9999999999999999999999987 89999999988884 6899999999999
Q ss_pred -CCeEEEEEEecCC-----Cceeeee
Q 043219 569 -GSQCTFVYVQGGP-----QAKVSVL 588 (591)
Q Consensus 569 -G~s~~fG~i~~~~-----~a~~~v~ 588 (591)
|+|++|||++..+ |+.++|.
T Consensus 455 ~g~s~~~gf~~~~~g~~~~p~~~~ln 480 (515)
T 3icg_A 455 NGGTQSFGFNINYSGVLSKPTGFTVN 480 (515)
T ss_dssp TTEEEEEEEEEEECSSCCCCSCCEET
T ss_pred CCceEEEEEEEeCCCCCCCCceEEEC
Confidence 9999999998642 5566554
No 14
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=99.38 E-value=7.3e-13 Score=113.90 Aligned_cols=71 Identities=23% Similarity=0.467 Sum_probs=62.7
Q ss_pred eeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCc--eeecCCCcCCCCCCCeE
Q 043219 499 VEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENR--TYQLPPWLKVLKPGSQC 572 (591)
Q Consensus 499 ~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~--~~~~psw~~~i~~G~s~ 572 (591)
+.++|+ +++|.+| ||++|+|+|++. ++|+|+|+++ |+++||++++++|+ ++++++||+ |+++
T Consensus 10 g~c~y~-~n~W~~G----f~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~s~sg~~vt~~n~~wN~----G~s~ 77 (103)
T 2cwr_A 10 GSLEVK-VNDWGSG----AEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANKQEGNGYVIFTPVSWNK----GPTA 77 (103)
T ss_dssp EEEEEE-EEECSSE----EEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEEEEETTEEEEEECTTCC----SSEE
T ss_pred ccEEEE-ECCCCCc----eEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEEecCCCEEEEEcCCcCC----Ccee
Confidence 334777 8999999 999999999964 8999999987 89999999988874 599999999 9999
Q ss_pred EEEEEecCC
Q 043219 573 TFVYVQGGP 581 (591)
Q Consensus 573 ~fG~i~~~~ 581 (591)
+|||++.++
T Consensus 78 sfGf~gs~~ 86 (103)
T 2cwr_A 78 TFGFIVNGP 86 (103)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEecC
Confidence 999998765
No 15
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=99.23 E-value=1.9e-12 Score=107.94 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=60.3
Q ss_pred CeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCceeecCCCcCCCCCCCeEE
Q 043219 498 PVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENRTYQLPPWLKVLKPGSQCT 573 (591)
Q Consensus 498 ~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~ 573 (591)
.|+++|+++++|++| ||++|+|+| +++|+|+|++| |++.||++++++|.+++.-. ||++.+
T Consensus 2 ~cta~y~v~~~W~~G----f~~~vtVtn-----~~gWtv~~~~~~g~~i~~~Wn~~~s~sg~~vt~~n------~G~s~s 66 (87)
T 1e5b_A 2 GCSVTATRAEEWSDG----FNVTYSVSG-----SSAWTVNLALNGSQTIQASWNANVTGSGSTRTVTP------NGSGNT 66 (87)
T ss_dssp CCCCBCCBCCCCSSE----EEEEEBCCS-----CSSCCCEEECCTTCCEEEEESBCCEESSSCEECCB------CSSCSS
T ss_pred ceEEEEEECccCCCC----EEEEEEEEc-----cCceEEEEEcCCCCEEeeeeceeEecCCCEEEEEC------CCceeE
Confidence 699999999999999 999999997 59999999988 88999999988886554332 899999
Q ss_pred EEEEecCC
Q 043219 574 FVYVQGGP 581 (591)
Q Consensus 574 fG~i~~~~ 581 (591)
|||++..+
T Consensus 67 fGf~g~~~ 74 (87)
T 1e5b_A 67 FGVTVMKN 74 (87)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 99998754
No 16
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=99.20 E-value=8.3e-12 Score=104.20 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=60.8
Q ss_pred CCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecC----CCCcccceeecCCceeecCCCcCCCCCCCeE
Q 043219 497 NPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENL----SGSLWGLSPTSENRTYQLPPWLKVLKPGSQC 572 (591)
Q Consensus 497 ~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~----~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~ 572 (591)
..|+++|+++++|++| ||++|+|+ | +++|+|+|++| |++.||++++++|.+++.. +||++.
T Consensus 2 g~Ctaty~~~n~W~~G----f~a~vtVt--g---~~gWtv~~~~~~gq~vt~~Wna~~s~sg~~vt~~------~~G~s~ 66 (88)
T 1heh_C 2 GSCSVSAVRGEEWADR----FNVTYSVS--G---SSSWVVTLGLNGGQSVQSSWNAALTGSSGTVTAR------PNGSGN 66 (88)
T ss_dssp CCCCCCCCCCSBCSSE----EEEEEECS--S---CCSCCCEEECCSSCCCCCEESSEEECSSSEEEEE------CSSSCS
T ss_pred CceEEEEEEcccCCCc----eEEEEEEe--c---cccEEEEEECCCCCEEEccccccCccCCCEEEEe------CCCcee
Confidence 4699999999999999 99999998 4 39999999988 8999999999988655443 389999
Q ss_pred EEEEEecCC
Q 043219 573 TFVYVQGGP 581 (591)
Q Consensus 573 ~fG~i~~~~ 581 (591)
+|||++..+
T Consensus 67 sfGf~g~~~ 75 (88)
T 1heh_C 67 SFGVTFYKN 75 (88)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEecC
Confidence 999998754
No 17
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.24 E-value=0.53 Score=48.89 Aligned_cols=114 Identities=10% Similarity=-0.052 Sum_probs=68.5
Q ss_pred HHh-hhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHh-ccCCCHHHHHHHH
Q 043219 122 DYF-MKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIA-FKPYNSSYSELLL 199 (591)
Q Consensus 122 Dwl-lkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~v-fk~~D~~yA~~~L 199 (591)
.|. ..+++..|+||+++.. |.. ..|. + +.....+.++.++|.|+++ +++ | .++
T Consensus 22 ~fw~~~~~D~~GGf~~~~~~---d~~--~~~~----e----------K~l~~nar~i~~~a~a~~~~~~~--~----~~~ 76 (388)
T 2gz6_A 22 PFWENHSLDSEGGYFTCLDR---QGK--VYDT----D----------KFIWLQNRQVWTFSMLCNQLEKR--E----NWL 76 (388)
T ss_dssp HHHHHHCBCTTSSBCCEEBT---TSC--EEEC----C----------EEHHHHHHHHHHHHHHHHHTCCC--H----HHH
T ss_pred HHHHhcCCCCCCCEEeEECC---CCC--cCCc----c----------hhHHHHHHHHHHHHHHHHHhcCC--H----HHH
Confidence 444 5576557788888853 321 1121 1 2244468999999999998 554 3 578
Q ss_pred HHHHHHHHHHHhc-C---CCCCCCCcccCCCCCCCCch-H--HHHHHHHHHHHHcCchHHHHHHHHhh
Q 043219 200 LHAKQLFSFADRF-R---GLYDDSIKCAKQFYTSSGYS-D--DLLWAATWLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 200 ~~A~~ay~~a~~~-~---~~y~~~~~~~~g~Y~~~~~~-D--e~~wAAaeLy~aTgd~~Yl~~~~~~~ 260 (591)
+.|++..+|..++ . |.+-......+..-...... | -+++|.+++|++||+++|++.+++..
T Consensus 77 ~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~ 144 (388)
T 2gz6_A 77 KIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQAY 144 (388)
T ss_dssp HHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8899999999886 1 22111100000000011221 2 33668889999999999999887644
No 18
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.83 E-value=0.22 Score=51.66 Aligned_cols=122 Identities=13% Similarity=0.040 Sum_probs=75.9
Q ss_pred chHHHHHHHHHHHHHh-hhhccC--CCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHH
Q 043219 109 QMGHALWAIRWGTDYF-MKAHTQ--PNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAI 185 (591)
Q Consensus 109 ~~pdiLdE~kwglDwl-lkm~~~--~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~ 185 (591)
+-|..|+.++-..++| .+-..+ .|+++-+.. +..|+. +-..+.++.++|..++
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------aisN~~~~~~la~l~~ 164 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------TPVNAPFIILSCWLYN 164 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------HHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------hhhHHHHHHHHHHHHH
Confidence 5688999999999998 444332 355544331 122431 2234667777777788
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhc---C-CCCCCCCcccCCCCCC--CCch---HHHHHHHHHHHHHcCchHHHHHH
Q 043219 186 AFKPYNSSYSELLLLHAKQLFSFADRF---R-GLYDDSIKCAKQFYTS--SGYS---DDLLWAATWLYRATNEEYYLKYV 256 (591)
Q Consensus 186 vfk~~D~~yA~~~L~~A~~ay~~a~~~---~-~~y~~~~~~~~g~Y~~--~~~~---De~~wAAaeLy~aTgd~~Yl~~~ 256 (591)
++.+ .++|+.|+++|+|..++ + +.+-|.......-+.+ ..+. --++.|+++||++||+++|++.+
T Consensus 165 ~tgd------~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a 238 (349)
T 3k7x_A 165 ELNE------TKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTA 238 (349)
T ss_dssp HHCC------HHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HhCC------HHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHH
Confidence 7754 46889999999999874 2 2233322110011111 1121 25788999999999999999988
Q ss_pred HHhh
Q 043219 257 VDNA 260 (591)
Q Consensus 257 ~~~~ 260 (591)
++..
T Consensus 239 ~~l~ 242 (349)
T 3k7x_A 239 NKTA 242 (349)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=95.45 E-value=0.042 Score=58.11 Aligned_cols=143 Identities=17% Similarity=0.160 Sum_probs=76.1
Q ss_pred cccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhh-ccCC-CeEEEEeCCCCCCCCCCCCCCCCCCC
Q 043219 80 VKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKA-HTQP-NVLWAQVGDGDSDHYCWERAEDMTTP 157 (591)
Q Consensus 80 ~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm-~~~~-g~~y~qVgd~~~dh~~W~~Pe~~~~~ 157 (591)
.|.+.-.+--++.++.++.. -+.|+.|+.++-+++||++- ...+ |++|+.+-++ .|.+. .
T Consensus 48 ~k~l~~n~r~i~~~a~a~~~--------~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG--------~~~~~--~ 109 (402)
T 3gt5_A 48 HRHLVSSTRFVFNYAMAYLQ--------FGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD--------RVEDD--T 109 (402)
T ss_dssp EEEHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT--------EEEEC--C
T ss_pred chhHHHHHHHHHHHHHHHHh--------hCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC--------CCCcC--C
Confidence 46554444444444433321 25699999999999999984 4444 7788777321 12110 1
Q ss_pred cceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCCccc--CCCCCCC
Q 043219 158 REAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRF---R--GLYDDSIKCA--KQFYTSS 230 (591)
Q Consensus 158 R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~---~--~~y~~~~~~~--~g~Y~~~ 230 (591)
+.+|. -+-++-||+. ..+.-|++ .|+.|+++++..+++ | |.|.+..... ...|.
T Consensus 110 ~~lyd----------~Af~i~al~~---~~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~-- 170 (402)
T 3gt5_A 110 NHCYG----------LAFVMLAYSC---GLKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYR-- 170 (402)
T ss_dssp EEHHH----------HHHHHHHHHH---HHHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCE--
T ss_pred cchHH----------HHHHHHHHHH---HHHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCC--
Confidence 22221 1222223333 22233544 566777788777765 1 2232111000 00111
Q ss_pred CchHH--HHHHHHHHHHHcCchHHHHHHHHh
Q 043219 231 GYSDD--LLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 231 ~~~De--~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
...+- ++-|.+.||++||++.|++.+++.
T Consensus 171 ~~n~~m~l~eall~L~~~tgd~~~~~~a~~l 201 (402)
T 3gt5_A 171 GQNANMHMCEAMLAAYEASGEQRYLERALVL 201 (402)
T ss_dssp EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 12222 455789999999999999987653
No 20
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.30 E-value=0.07 Score=55.68 Aligned_cols=123 Identities=12% Similarity=-0.008 Sum_probs=74.1
Q ss_pred chHHHHHHHHHHHHHhhhh-ccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhc
Q 043219 109 QMGHALWAIRWGTDYFMKA-HTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAF 187 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm-~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vf 187 (591)
+-|+.++.++-.++||++- +..+|++|+.+.. |. .|.+. .+. ...-+-++.+|+.++++.
T Consensus 71 ~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~---dg----~~~~~--~~~----------~~~~af~i~al~~~y~~t 131 (388)
T 2gz6_A 71 KRENWLKIARNGAKFLAQHGRDDEGNWYFALTR---GG----EPLVQ--PYN----------IFSDCFAAMAFSQYALAS 131 (388)
T ss_dssp CCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECT---TS----CBCCC--CCC----------HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC---CC----CcccC--Ccc----------hHHHHHHHHHHHHHHHHh
Confidence 4688999999999999997 5557888887731 21 12111 121 222355667777777776
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCcccCCCCCCCCchH--HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 188 KPYNSSYSELLLLHAKQLFSFADRFR----GLYDDSIKCAKQFYTSSGYSD--DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 188 k~~D~~yA~~~L~~A~~ay~~a~~~~----~~y~~~~~~~~g~Y~~~~~~D--e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
.+ + +.|+.|++++++..++- +.+....+.. ..+. +..+ -++.|.+.||++|+++.|++.+.+.
T Consensus 132 g~--~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~-~~~~--~~~~~~~~~~all~l~~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 132 GE--E----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGT-RPMK--ALAVPMILANLTLEMEWLLPQETLENVLAAT 200 (388)
T ss_dssp CC--H----HHHHHHHHHHHHHHTC--------------C-CCCE--ETHHHHHHHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred CC--H----HHHHHHHHHHHHHHHHhcCCCcccCcccCCC-CCCC--CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 43 4 56778888888877652 2221111000 0111 1222 3466789999999999999987654
No 21
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.48 E-value=0.94 Score=47.59 Aligned_cols=171 Identities=16% Similarity=0.109 Sum_probs=86.9
Q ss_pred ccceecC--CCCcccccchHHHHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc--cCCCeEEEEeCCC-CCC
Q 043219 70 VGGYYDA--GDHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH--TQPNVLWAQVGDG-DSD 144 (591)
Q Consensus 70 sGGWyDA--GD~~Ky~~~~a~s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~--~~~g~~y~qVgd~-~~d 144 (591)
.||++++ +|...-..+...+...|+.++.+.... -+-+..++.++.-++.+++-. +++|.+...+... ..+
T Consensus 153 ~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~----tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~ 228 (402)
T 3gt5_A 153 YGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEA----SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVD 228 (402)
T ss_dssp TTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBC
T ss_pred CCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHh----hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCc
Confidence 4788753 342211112344444444444433322 234778888999999888653 5556554444321 000
Q ss_pred CCC-CCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc------CCCCC
Q 043219 145 HYC-WERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRF------RGLYD 217 (591)
Q Consensus 145 h~~-W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~------~~~y~ 217 (591)
..+ ...|.+. -|+ +.+ +||-+ .+.+--|-.++++.. | .++++.|+++++++.++ .+.+.
T Consensus 229 ~~~~~~~~~~~--~~~-~~~---~pGH~--iE~awlLl~~~~~~~--~----~~~~~~A~~l~~~~~~~gwd~~~Gg~~~ 294 (402)
T 3gt5_A 229 WDYNRDNPKHL--FRP-WGF---QPGHQ--TEWAKLLLILDRYIE--V----EWLVPVARSLFDVAVARSWDAVRGGLCY 294 (402)
T ss_dssp TTTTTTSTTCS--SSC-SSB---CHHHH--HHHHHHHHHHHHHCC--C----TTHHHHHHHHHHHHHHHHBCTTTCSBCS
T ss_pred cccccCCcccc--cCc-CCC---CCChH--HHHHHHHHHHHHhhC--c----HHHHHHHHHHHHHHHHhcccCCCCcEEE
Confidence 000 0111111 122 122 36654 345555555666643 3 34777888888887653 22221
Q ss_pred CCCcccCCCC-CCCC--chHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 218 DSIKCAKQFY-TSSG--YSDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 218 ~~~~~~~g~Y-~~~~--~~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
.. ...+..- .... ..-|.+-|++.||+.|||++|++.+++.
T Consensus 295 ~~-d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~ 338 (402)
T 3gt5_A 295 GF-APDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRL 338 (402)
T ss_dssp EE-CTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred EE-cCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 00 0000000 0111 1348888999999999999999987654
No 22
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=92.28 E-value=2.4 Score=43.69 Aligned_cols=67 Identities=24% Similarity=0.247 Sum_probs=44.9
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHH---HHHHHHHHcCchHHH
Q 043219 177 AAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLW---AATWLYRATNEEYYL 253 (591)
Q Consensus 177 AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~w---AAaeLy~aTgd~~Yl 253 (591)
-.+|.-++++..+ + ++++.|+++..+.......+ . ..++.||..| |.+.+|++|++++||
T Consensus 52 ~~~l~d~~~~tgd--~----~y~~~a~~~~~~~~~~~~~~----------~-~~~~~DD~a~~~la~~~aye~t~~~~yL 114 (349)
T 3k7x_A 52 VEVRLDAYLRTKK--Q----ADLEVAEKTYLHNKNRNGGT----------L-IHDFYDDMLWNALAAYRLYKATGKSIYL 114 (349)
T ss_dssp HHHHHHHHHHHCC--H----HHHHHHHHHHHHHHHHTTSS----------S-CCSBHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhCC--H----HHHHHHHHHHHHHHhcCCCC----------C-CccCccHHHHHHHHHHHHHHHHCCchHH
Confidence 4888888888754 4 45666777666665432110 1 1234566655 889999999999999
Q ss_pred HHHHHhh
Q 043219 254 KYVVDNA 260 (591)
Q Consensus 254 ~~~~~~~ 260 (591)
+.+++..
T Consensus 115 ~~A~~l~ 121 (349)
T 3k7x_A 115 EDAQLVW 121 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887543
No 23
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=91.67 E-value=1 Score=47.44 Aligned_cols=129 Identities=15% Similarity=0.077 Sum_probs=71.3
Q ss_pred chHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 109 QMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
+-++.++.+.=..|+|+.-....+++... |+...+ ..+.+ ..|+ +.....+|+-|++++.
T Consensus 131 g~~~~~~~~~~aA~~L~~r~~~~~g~iqs----------w~~~~~-~~~~~-~iID--------~~mni~~L~~A~~~~g 190 (397)
T 2zzr_A 131 GDVKALEATIKAADKLMERYQEKGGFIQA----------WGELGY-KEHYR-LIID--------CLLNIQLLFFAYEQTG 190 (397)
T ss_dssp CCHHHHHHHHHHHHHHHTTEETTTTEECC----------SSSTTC-GGGCE-EETT--------HHHHTHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhCcCCCEEEe----------cccCCC-CCCCc-eeec--------hHhHHHHHHHHHHHhC
Confidence 34668888888899998654333332221 321111 11122 2333 3557788999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCC-CCC----CC-CcccCCCCCCCCchHH---------HHHHHHHHHHHcCchHHH
Q 043219 189 PYNSSYSELLLLHAKQLFSFADRFRG-LYD----DS-IKCAKQFYTSSGYSDD---------LLWAATWLYRATNEEYYL 253 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~~~~~-~y~----~~-~~~~~g~Y~~~~~~De---------~~wAAaeLy~aTgd~~Yl 253 (591)
||.|.+...+||...-+......+ .|+ ++ .+.......-.++.|+ +++|-++||++|+|.+||
T Consensus 191 --d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL 268 (397)
T 2zzr_A 191 --DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQI 268 (397)
T ss_dssp --CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred --CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 477666666666655544422111 121 11 1100000012234443 577889999999999999
Q ss_pred HHHHHh
Q 043219 254 KYVVDN 259 (591)
Q Consensus 254 ~~~~~~ 259 (591)
+.+++.
T Consensus 269 ~~A~~l 274 (397)
T 2zzr_A 269 ILFKGM 274 (397)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 24
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=91.50 E-value=1.2 Score=46.50 Aligned_cols=118 Identities=17% Similarity=0.050 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHhh-hhcc-CCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhc--c
Q 043219 113 ALWAIRWGTDYFM-KAHT-QPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAF--K 188 (591)
Q Consensus 113 iLdE~kwglDwll-km~~-~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vf--k 188 (591)
+..|+.--+.+++ .+.+ ..|+|++.+.. |. . |-. .+ +..-..+.+..++|.|++++ .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg---~-~~~--~~----------k~l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DG---R-VYD--DL----------KYVWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TS---C-BSC--CC----------EEHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CC---C-CCC--Cc----------cchhhhHHHHHHHHHHHHHhccc
Confidence 4445556677777 5664 46788887753 32 1 211 11 12344688899999999988 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccC-CCCC----CC-------CchH--HHHHHHHHHHHHcCchHHHH
Q 043219 189 PYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAK-QFYT----SS-------GYSD--DLLWAATWLYRATNEEYYLK 254 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~-g~Y~----~~-------~~~D--e~~wAAaeLy~aTgd~~Yl~ 254 (591)
. ++ ++++.|++..+|..++- ++. ..+ ++|. +. ...| -++||.++||++||+..|++
T Consensus 76 ~-~~----~~l~~A~~~~~fl~~~~--~d~---~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~ 145 (402)
T 1fp3_A 76 H-RP----ELLDAAKAGGEFLLRHA--RVA---PPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQS 145 (402)
T ss_dssp C-CH----HHHHHHHHHHHHHHHHT--BSS---TTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred C-CH----HHHHHHHHHHHHHHHhc--cCc---CCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 2 33 67889999999988752 111 011 2221 11 1112 45889999999999999998
Q ss_pred HHHHh
Q 043219 255 YVVDN 259 (591)
Q Consensus 255 ~~~~~ 259 (591)
.+.+.
T Consensus 146 ~A~~l 150 (402)
T 1fp3_A 146 EAVDM 150 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 25
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=90.21 E-value=1.1 Score=46.76 Aligned_cols=130 Identities=15% Similarity=0.036 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccC
Q 043219 110 MGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKP 189 (591)
Q Consensus 110 ~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~ 189 (591)
-+..++.+.=..++|+.-.+..+++... |+.-.+.....+ ..|+ +.....+|+-|++++.
T Consensus 106 ~~~~~~~~~~aA~~L~~r~~~~~g~i~s----------w~~~~~~~~~~~-~iID--------~mmni~~L~~A~~~~g- 165 (377)
T 2ahf_A 106 DESARKLALDAADVLMRRWRADAGIIQA----------WGPKGDPENGGR-IIID--------CLLNLPLLLWAGEQTG- 165 (377)
T ss_dssp CHHHHHHHHHHHHHHHTTEETTTTEECC----------BSSTTCTTTTTE-EEGG--------GGGGHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCCeEEe----------ccCCCCCCCCce-EEec--------hHHHHHHHHHHHHHhC-
Confidence 3567778888888888765443322211 432111011112 3343 3456788999999986
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC-C-----CCCCCcccCCCCCCCCchHH---------HHHHHHHHHHHcCchHHHH
Q 043219 190 YNSSYSELLLLHAKQLFSFADRFRG-L-----YDDSIKCAKQFYTSSGYSDD---------LLWAATWLYRATNEEYYLK 254 (591)
Q Consensus 190 ~D~~yA~~~L~~A~~ay~~a~~~~~-~-----y~~~~~~~~g~Y~~~~~~De---------~~wAAaeLy~aTgd~~Yl~ 254 (591)
||.|.+...++|+..-+......+ . |+...+..-....-.++.|+ +++|-++||+.|++++||+
T Consensus 166 -d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~ 244 (377)
T 2ahf_A 166 -DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLE 244 (377)
T ss_dssp -CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHH
Confidence 466666555555555443321111 1 11111100000022234444 5778899999999999999
Q ss_pred HHHHhh
Q 043219 255 YVVDNA 260 (591)
Q Consensus 255 ~~~~~~ 260 (591)
.+++..
T Consensus 245 ~A~~la 250 (377)
T 2ahf_A 245 TAKRMA 250 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 26
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=89.59 E-value=8.9 Score=39.62 Aligned_cols=72 Identities=17% Similarity=0.003 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHH--HHHHHHHHHHHcCchH
Q 043219 174 GETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDD--LLWAATWLYRATNEEY 251 (591)
Q Consensus 174 ~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De--~~wAAaeLy~aTgd~~ 251 (591)
|-+..+|+.++++.++ + ++++.|++..++.....+. .. |.... .|+ +.++.++||+.||+++
T Consensus 44 G~~~~gl~~~y~~tgd--~----~y~~~a~~~~~~~~~~~g~-------l~--~~~~~-lDd~~~g~~ll~lY~~Tgd~~ 107 (373)
T 1nc5_A 44 GVFLCGVLRLWEATGE--K----RYFEYAKAYADLLIDDNGN-------LL--FRRDE-LDAIQAGLILFPLYEQTKDER 107 (373)
T ss_dssp HHHHHHHHHHHHHHCC--H----HHHHHHHHHHHHHBCTTCC-------BC--CCTTC-GGGTGGGGGHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHhCC--H----HHHHHHHHHHHHHhCCCCc-------cc--CCCCC-cchHHHHHHHHHHHHHhCCHH
Confidence 5677778999998865 4 5566666666654321111 00 22111 222 4678899999999999
Q ss_pred HHHHHHHhhh
Q 043219 252 YLKYVVDNAE 261 (591)
Q Consensus 252 Yl~~~~~~~~ 261 (591)
|++.+....+
T Consensus 108 yl~~a~~la~ 117 (373)
T 1nc5_A 108 YVKAAKRLRS 117 (373)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHHHH
Confidence 9998876543
No 27
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.06 E-value=3.1 Score=44.36 Aligned_cols=114 Identities=14% Similarity=0.079 Sum_probs=74.1
Q ss_pred cchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhc
Q 043219 108 NQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAF 187 (591)
Q Consensus 108 ~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vf 187 (591)
.+.+++++.+|=-++.|++.|+++| ++++|=|. |+ .| +=|++++.+|.+|+-+.|.
T Consensus 287 ~~r~~l~~~~~~~a~~l~~~Q~~~G-~W~~vld~---------~~-------~y------~EsSaTAmfaygllkgvr~- 342 (445)
T 3k11_A 287 PQRPKVMDYFRAHVRGVTALQSGEG-FWHQLLDC---------ND-------SY------LETSATAIYVYCLAHAINK- 342 (445)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCTTS-CEESBTTC---------TT-------SC------EEHHHHHHHHHHHHHHHHH-
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCC-chhhccCC---------CC-------CC------CCccHHHHHHHHHHHHHHc-
Confidence 4678899999999999999998765 77776431 21 12 1267789999999998874
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhcC---CCCCCCC-c----ccCCCC-CCCC-c-----hHHHHHHHHHHHHHcC
Q 043219 188 KPYNSSYSELLLLHAKQLFSFADRFR---GLYDDSI-K----CAKQFY-TSSG-Y-----SDDLLWAATWLYRATN 248 (591)
Q Consensus 188 k~~D~~yA~~~L~~A~~ay~~a~~~~---~~y~~~~-~----~~~g~Y-~~~~-~-----~De~~wAAaeLy~aTg 248 (591)
.-.|+ ++++..|+++|+....+- |...... . ....+| ...- . .--++||++|+++..+
T Consensus 343 G~Ld~---~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g~d~~~Y~~~p~~~~d~~G~G~fllA~~E~~~l~~ 415 (445)
T 3k11_A 343 GWIDA---IAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLLN 415 (445)
T ss_dssp TSSCH---HHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCH---HHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCCCCchhhccCcccCCCCccHHHHHHHHHHHHHHhc
Confidence 23453 578999999999987652 2211110 0 001133 2111 1 1258999999999854
No 28
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=87.20 E-value=10 Score=39.08 Aligned_cols=57 Identities=18% Similarity=0.115 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcccCCCC-----CCCCchHHHHHHH---HHHHHHcCchHHHHHHHHh
Q 043219 197 LLLLHAKQLFSFADRFRGLYDDSIKCAKQFY-----TSSGYSDDLLWAA---TWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 197 ~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y-----~~~~~~De~~wAA---aeLy~aTgd~~Yl~~~~~~ 259 (591)
++++.|+++.++..++|.. ..++++ +...+.|.++++. ++|++.|||++|++.+.+.
T Consensus 107 ~yl~~a~~la~~l~~~~r~------~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~ 171 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT------SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQ 171 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC------TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC------CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 4677788888777666521 012333 2234678877655 6888999999999988663
No 29
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=85.67 E-value=9.3 Score=40.10 Aligned_cols=136 Identities=16% Similarity=0.073 Sum_probs=71.5
Q ss_pred chHHHHHHHHHHHHHhhhhcc--CCCeEEEEeCCCCCCCCCCCC-CC---CCCCCcc-eeecCCCCCChHHHHHHHHHHH
Q 043219 109 QMGHALWAIRWGTDYFMKAHT--QPNVLWAQVGDGDSDHYCWER-AE---DMTTPRE-AFKLDQYHPGSDLAGETAAALA 181 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~--~~g~~y~qVgd~~~dh~~W~~-Pe---~~~~~R~-~~~~~~~~p~s~~a~~~AAalA 181 (591)
+-++.++.++--++.+++... .++.+.....+ .|.+ ++ ++...|. -+.+ +||-+ .+.+=.|.
T Consensus 189 gd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~------~~~~~~~~~~dd~~~r~~~~~~---~pgh~--iE~~wlLl 257 (421)
T 2zbl_A 189 HDKKWLDRALRIASVIIHDVARNGDYRVNEHFDS------QWNPIRDYNKDNPAHRFRAYGG---TPGAW--IEWGRLML 257 (421)
T ss_dssp CCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECT------TSCBCTTTTTTSTTCSSSCSSB---CHHHH--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCC------ccccchhccCCCcccccccCCC---CCChH--HHHHHHHH
Confidence 345677777777888776532 23444333321 1322 12 1112221 0222 25554 34555667
Q ss_pred HHHHhccC-CC--HHHHHHHHHHHHHHHHHHHhc-------CCCCCCCCcccCCCC-CCCCc--hHHHHHHHHHHHHHcC
Q 043219 182 ASAIAFKP-YN--SSYSELLLLHAKQLFSFADRF-------RGLYDDSIKCAKQFY-TSSGY--SDDLLWAATWLYRATN 248 (591)
Q Consensus 182 ~As~vfk~-~D--~~yA~~~L~~A~~ay~~a~~~-------~~~y~~~~~~~~g~Y-~~~~~--~De~~wAAaeLy~aTg 248 (591)
.++++... .| + .++++.|+++++++.++ .|.+..... .+..- ....+ .-|.+-|++.||+.||
T Consensus 258 ~~~~~~~~~~~~~~---~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~-~g~~~~~~k~~w~~aea~~all~l~~~tg 333 (421)
T 2zbl_A 258 HLHAALEARFETPP---AWLLEDAKGLFHATIRDAWAPDGADGFVYSVDW-DGKPIVRERVRWPIVEAMGTAYALYTLTD 333 (421)
T ss_dssp HHHHHHHHTTCCCC---THHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCT-TSCBSCCCEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcccccccch---HHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecC-CCCccCCCcccHHHHHHHHHHHHHHHHhC
Confidence 77777632 13 2 15788888888887553 232211100 00000 01111 2388889999999999
Q ss_pred chHHHHHHHHh
Q 043219 249 EEYYLKYVVDN 259 (591)
Q Consensus 249 d~~Yl~~~~~~ 259 (591)
+++|++.+++.
T Consensus 334 d~~yl~~a~~~ 344 (421)
T 2zbl_A 334 DSQYEEWYQKW 344 (421)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999877653
No 30
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=84.68 E-value=2.8 Score=43.68 Aligned_cols=84 Identities=15% Similarity=0.058 Sum_probs=50.9
Q ss_pred CChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH-Hhc------CCCCCC--CCcccCCCCCCCC----chH
Q 043219 168 PGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFA-DRF------RGLYDD--SIKCAKQFYTSSG----YSD 234 (591)
Q Consensus 168 p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a-~~~------~~~y~~--~~~~~~g~Y~~~~----~~D 234 (591)
||-+ .+.+-.|+.+++++. |+ ++++.|+++++++ .++ .+.+.. .......++.+.. ..-
T Consensus 246 pgh~--ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qa 317 (402)
T 1fp3_A 246 PGHA--LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHS 317 (402)
T ss_dssp HHHH--HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHH
T ss_pred CCcH--HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHH
Confidence 6544 345556888999874 44 5677788888887 543 222211 0000111111111 112
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 235 DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 235 e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
|.+.|++.||++|||++|++.+++.
T Consensus 318 ea~~a~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 318 EAMIAFLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 7899999999999999999987664
No 31
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.70 E-value=42 Score=35.58 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCcccCCCCCCCCchHHHHHHH---HHHHHHcCc
Q 043219 174 GETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRF-RGLYDDSIKCAKQFYTSSGYSDDLLWAA---TWLYRATNE 249 (591)
Q Consensus 174 ~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~-~~~y~~~~~~~~g~Y~~~~~~De~~wAA---aeLy~aTgd 249 (591)
+-++.+|--+++. ..|+ ++++.|+++.++.... |.. .+..-.-...|...-+.|-++-+. +++.+.||+
T Consensus 148 g~~~~~Li~lY~~--T~d~----~yl~~a~~~ad~L~~~~pRt-~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd 220 (445)
T 3k11_A 148 GAVCTAMIKLRLK--DESL----PVDGLIQNYFDFIINKEYRL-ADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKE 220 (445)
T ss_dssp HHHHHHHHHHHHH--CTTC----CCHHHHHHHHHHHHHTSCBC-TTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHh--cCCH----HHHHHHHHHHHHHHHcCCCC-CCCceeecCCCCCceEecchhhHHHHHHHHHHHHCC
Confidence 3444445444442 2344 4555666666666553 211 010000001133345678775544 577788999
Q ss_pred hH--HHHHHHHh
Q 043219 250 EY--YLKYVVDN 259 (591)
Q Consensus 250 ~~--Yl~~~~~~ 259 (591)
++ |++.+.+.
T Consensus 221 ~~~~y~d~A~~q 232 (445)
T 3k11_A 221 AKNKYLAEAVKQ 232 (445)
T ss_dssp GHHHHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 99 99987653
No 32
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=75.61 E-value=24 Score=36.63 Aligned_cols=145 Identities=10% Similarity=-0.029 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc-cCCCeEEEEeC----CCCCCCCCCCCCCCCCCCcceeecC
Q 043219 90 VTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH-TQPNVLWAQVG----DGDSDHYCWERAEDMTTPREAFKLD 164 (591)
Q Consensus 90 ~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~-~~~g~~y~qVg----d~~~dh~~W~~Pe~~~~~R~~~~~~ 164 (591)
+..|+|+...+ +-|+.+++++-.++++++-+ .++|.+||.+- ++..-| .|..+.-..+..+
T Consensus 154 i~~L~~A~~~~--------gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~-~~t~qG~~dds~W----- 219 (377)
T 2ahf_A 154 LPLLLWAGEQT--------GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIR-GGTHQGNTDGSTW----- 219 (377)
T ss_dssp HHHHHHHHHHH--------CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEE-EECSSSSSTTSCB-----
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeee-CCCcCCcCCcchh-----
Confidence 56677765443 56889999999999999987 44678887764 221111 0111100000111
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc-CC---CCCC-CCcccCCCCCCCCchHHHHHH
Q 043219 165 QYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRF-RG---LYDD-SIKCAKQFYTSSGYSDDLLWA 239 (591)
Q Consensus 165 ~~~p~s~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~-~~---~y~~-~~~~~~g~Y~~~~~~De~~wA 239 (591)
+---+-++-+++..++.-+ | .++|+.|+++-++..++ |. .|-+ ..+.....+.++.-.-=.+.+
T Consensus 220 -----aRGqAw~i~gl~~ly~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~ 288 (377)
T 2ahf_A 220 -----TRGQAWGIYGFALNSRYLG--N----ADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACG 288 (377)
T ss_dssp -----HHHHHHHHHHHHHHHHHHT--C----HHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHC--C----hHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCCCHHHHHHHH
Confidence 1111334445555566543 3 56788999998888876 21 1211 101011111111111122344
Q ss_pred HHHHHHHcC-----chHHHHHHHHh
Q 043219 240 ATWLYRATN-----EEYYLKYVVDN 259 (591)
Q Consensus 240 AaeLy~aTg-----d~~Yl~~~~~~ 259 (591)
=.+|.+.|+ +++|++.+.+.
T Consensus 289 Ll~L~~~~~~~~~~~~~Y~~~A~~~ 313 (377)
T 2ahf_A 289 LLEIASQLDESDPERQRFIDAAKTT 313 (377)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCccccchHHHHHHHHHH
Confidence 467888896 67788876653
No 33
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=73.84 E-value=13 Score=39.09 Aligned_cols=115 Identities=10% Similarity=-0.083 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCC
Q 043219 112 HALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYN 191 (591)
Q Consensus 112 diLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D 191 (591)
-+.+++.--++|.+++.+.. +| +.+.. | |.+... .+ +..-+.+.++.++|.|++ +++
T Consensus 12 wl~~~~~~ll~f~~~~~d~~-GF-~~ld~---~---g~~~~~--~~----------k~~~~nar~i~~~a~a~~-~g~-- 68 (421)
T 2zbl_A 12 WLEQETDRIFNFGKNAVVPT-GF-GWLGN---K---GQIKEE--MG----------THLWITARMLHVYSVAAS-MGR-- 68 (421)
T ss_dssp HHHHHHHHHHHHHGGGEETT-EE-CCBCT---T---SCBCGG--GC----------EEHHHHHHHHHHHHHHHH-TTC--
T ss_pred HHHHHHHHHHHHHHhCcCCC-Cc-ceECC---C---CCCCCC--ch----------hhHHHHHHHHHHHHHHHH-cCC--
Confidence 35566777777777776444 55 33322 2 322111 01 224456899999999997 643
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCC---------CCc---hHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 192 SSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTS---------SGY---SDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 192 ~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~---------~~~---~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
+ ++++.|++..+|..++ .++.. .+|+|-+ ... .-.+++|.++ |++||++.|++.+++.
T Consensus 69 ~----~~l~~A~~~~~fl~~~--~~D~~---~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~ 138 (421)
T 2zbl_A 69 P----GAYDLVDHGIKAMNGA--LRDKK---YGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKLLDYT 138 (421)
T ss_dssp T----THHHHHHHHHHHHTTT--TBCTT---TSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHH
T ss_pred h----hHHHHHHHHHHHHHHh--ccCcC---CCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHHHHHH
Confidence 3 4678899999998876 33211 1244311 011 1266789999 9999999999987653
No 34
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=72.12 E-value=24 Score=36.55 Aligned_cols=114 Identities=11% Similarity=0.016 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHhhhhccCCCeEEEEeCCCC-CCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccC
Q 043219 111 GHALWAIRWGTDYFMKAHTQPNVLWAQVGDGD-SDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKP 189 (591)
Q Consensus 111 pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~-~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~ 189 (591)
++|.+.|+-.++-|+.+...++.|-.+..++. .|. ....++-+. .|-+..+|..++++.++
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~--------k~~~~W~Wt----------~G~~~~gl~~~ye~Tgd 86 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDT--------KGWAGWEWT----------HGVGLYGIYQYYQQTGD 86 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECS--------SSTTSCSHH----------HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhccCccccccccCCccccccC--------CCCcCcccc----------HHHHHHHHHHHHHHHCC
Confidence 45666666677777777666666655554321 111 111222221 25577788888888765
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHhh
Q 043219 190 YNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNA 260 (591)
Q Consensus 190 ~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~~ 260 (591)
+ ++++.|++.++.-....+...+ ..+. -...+.++||+.|||++|++.+....
T Consensus 87 --~----~y~~~a~~~~~~~~~~~~~~~n--------~D~~----~~~~~l~~lY~~Tgd~~Yl~~a~~~a 139 (382)
T 3pmm_A 87 --I----EMRDIIDRWFADRFAEGATTKN--------VNTM----APFLTLAYRFEETGRMAYLPWLESWA 139 (382)
T ss_dssp --H----HHHHHHHHHHHHHHHHCCCCCC--------TTTT----TTHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred --H----HHHHHHHHHHHHHHcCCCCcCc--------ccch----HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4 4444555444322221111000 0001 12346689999999999999886543
No 35
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=67.69 E-value=19 Score=37.27 Aligned_cols=77 Identities=6% Similarity=-0.000 Sum_probs=56.8
Q ss_pred cchHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhc
Q 043219 108 NQMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAF 187 (591)
Q Consensus 108 ~~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vf 187 (591)
.+.+++++.+|=-++.|++.|+++| ++++|=+ .|+ .| +=|++++.+|.+|+-+.|.
T Consensus 256 ~~~~~~~~~~~~~a~~~~~~q~~~G-~W~~~~d---------~~~-------~y------~EsSatA~~ay~ll~~~~~- 311 (382)
T 3pmm_A 256 AVRRYLITVLDAQIAALAECQDDSG-LWHTLLD---------DPH-------SY------LEASATAGFAYGILKAVRK- 311 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTS-CEESBTT---------CTT-------SC------EEHHHHHHHHHHHHHHHHT-
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCC-ChhhccC---------CCC-------CC------ccccHHHHHHHHHHHHHHc-
Confidence 3568899999999999999998765 6666633 122 12 1267789999999999882
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhc
Q 043219 188 KPYNSSYSELLLLHAKQLFSFADRF 212 (591)
Q Consensus 188 k~~D~~yA~~~L~~A~~ay~~a~~~ 212 (591)
.-.+ ++++..|+++|+-..++
T Consensus 312 g~l~----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 312 RYVG----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp TSSC----GGGHHHHHHHHHHHHHT
T ss_pred CCCc----HHHHHHHHHHHHHHHhh
Confidence 1124 36889999999998876
No 36
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=61.44 E-value=63 Score=33.64 Aligned_cols=43 Identities=2% Similarity=-0.181 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhHHHHHhccchHHHHHHHHHHHHHhhhhc-cCCCeEEEEeC
Q 043219 89 TVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYFMKAH-TQPNVLWAQVG 139 (591)
Q Consensus 89 s~~~L~~a~~ef~~~~~s~~~~pdiLdE~kwglDwllkm~-~~~g~~y~qVg 139 (591)
.+..|+|+... -+-|+.+++++--.+++++-+ .++|.+||.+-
T Consensus 178 ni~~L~~A~~~--------~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~ 221 (397)
T 2zzr_A 178 NIQLLFFAYEQ--------TGDEKYRQVAVNHFYASANNVVRDDSSAFHTFY 221 (397)
T ss_dssp HTHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEE
T ss_pred HHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEE
Confidence 44556665433 256889999999999999876 44688887764
No 37
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=61.19 E-value=84 Score=32.64 Aligned_cols=114 Identities=15% Similarity=0.101 Sum_probs=68.6
Q ss_pred chHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhcc
Q 043219 109 QMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFK 188 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk 188 (591)
+.+.+++.|+=.++|+++.+..+| .|........++.+.. +-|+ .-++-++..+++++.
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~g--------------~wp~~~~~~~~~~~~w----ChG~---~Gi~~~l~~~~~~~~ 306 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPSG--------------NYPPCIGDNRDLLVHW----CHGA---PGVIYMLIQAYKVFR 306 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTTS--------------CCCSBTTCCCCCCCSS----SSSH---HHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHhhccCC--------------CCCCCCCcccCccccc----cCCc---HHHHHHHHHHHHHcC
Confidence 457788899999999999863222 1321111111222222 2333 346666778888885
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 189 PYNSSYSELLLLHAKQLFSFAD--RFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 189 ~~D~~yA~~~L~~A~~ay~~a~--~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
|+++-+.+.+.++.+|+... +.++..+ +.. =....-..||+.|+++.|++.+.+.
T Consensus 307 --~~~~~~~a~~~~~~~~~~g~~~~~~~lCh----------G~a----G~~~~ll~~~~~t~~~~~~~~A~~~ 363 (411)
T 3e6u_A 307 --EEKYLCDAYQCADVIWQYGLLKKGYGLCH----------GSA----GNAYAFLTLYNLTQDMKYLYRACKF 363 (411)
T ss_dssp --CHHHHHHHHHHHHHHHHHCSBTTCSCSTT----------SHH----HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcCccCCCCceec----------ChH----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 58887777777777777421 1111111 111 2466778899999999999987654
No 38
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=58.42 E-value=31 Score=29.83 Aligned_cols=56 Identities=4% Similarity=-0.037 Sum_probs=34.7
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEE--EEEEec
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCT--FVYVQG 579 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~--fG~i~~ 579 (591)
-....++|+|.|+.+.....+.+... + - ...|..+..-. .+.|++|+|.+ |-+...
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~--~---p--~~gg~~vgt~t-v~~LaaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLG--N---P--AQGGVEIGRDT-ISRIPVGGTGLARVQWKAT 74 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSS--C---T--TTCCCCCBCCC-CSCBCTTCEEECCEEEECC
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeC--C---C--ccCCeEEeeEE-ccccCCCCeEEEEEEEecC
Confidence 47788999999999888877776542 1 0 11222122111 35799999988 555433
No 39
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=54.48 E-value=1.4e+02 Score=33.53 Aligned_cols=92 Identities=8% Similarity=-0.057 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHhccCCCHH
Q 043219 114 LWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSS 193 (591)
Q Consensus 114 LdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~vfk~~D~~ 193 (591)
.+.++=+++||++||.++|++-.--.+.......+.+|.+.-. +. .++ .+..+.|+.+..+|+.....+..+..+
T Consensus 480 ~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~fg-~~--~~d--~s~v~~Ta~vL~aL~~~~~~~~~~~~~ 554 (732)
T 1w6k_A 480 RERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFG-DI--MID--YTYVECTSAVMQALKYFHKRFPEHRAA 554 (732)
T ss_dssp HHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCS-SC--SSC--CCBHHHHHHHHHHHHHHHHHCTTSSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhccc-cc--ccC--CCcchHHHHHHHHHHHhccccccccch
Confidence 3457778999999998888762111100000001122322100 11 111 134566666777777666654333211
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 043219 194 YSELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 194 yA~~~L~~A~~ay~~a~~~~ 213 (591)
+.....+++-+|..++.
T Consensus 555 ---~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 555 ---EIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp ---HHHHHHHHHHHHHHHHS
T ss_pred ---hhHHHHHHHHHHHHhhc
Confidence 22334556667777764
No 40
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=53.08 E-value=87 Score=33.47 Aligned_cols=94 Identities=15% Similarity=0.061 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhhhhccCCC--eEEEE---------------eCCCCC-CCCCCC--CCCCCCCCcceeecCCCCCCh
Q 043219 111 GHALWAIRWGTDYFMKAHTQPN--VLWAQ---------------VGDGDS-DHYCWE--RAEDMTTPREAFKLDQYHPGS 170 (591)
Q Consensus 111 pdiLdE~kwglDwllkm~~~~g--~~y~q---------------Vgd~~~-dh~~W~--~Pe~~~~~R~~~~~~~~~p~s 170 (591)
+..++-++--+++|..+|..++ +.|.- .|.+.. -+..|. +|.+|.. |+-|.+ | |
T Consensus 204 ~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~-~yg~~i----p-S 277 (489)
T 2p0v_A 204 DEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDAT-TFQFLV----P-S 277 (489)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBC-SSSEEH----H-H
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcch-hcCcch----H-H
Confidence 3556788999999999876553 33321 111110 122333 4555542 222332 2 2
Q ss_pred HHHHHHHHHHHHHHHhccCC--CHHHHHHHHHHHHHHHHHHHhc
Q 043219 171 DLAGETAAALAASAIAFKPY--NSSYSELLLLHAKQLFSFADRF 212 (591)
Q Consensus 171 ~~a~~~AAalA~As~vfk~~--D~~yA~~~L~~A~~ay~~a~~~ 212 (591)
.+.+.++|-.++.+.+.+ |+++|++|.+.|+++-+..++|
T Consensus 278 --N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 278 --NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp --HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 466778888888887754 6789999999999988766654
No 41
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=52.86 E-value=1.1e+02 Score=31.14 Aligned_cols=83 Identities=6% Similarity=-0.048 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCC--CCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHh-
Q 043219 110 MGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWER--AEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIA- 186 (591)
Q Consensus 110 ~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~--Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~v- 186 (591)
-+...+.++=|++|||.||-.+|+ |.. |+.. -+.-.|+- .=|+++.+.-.|+....-
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~nGG--------------WpqFdpd~~---~Yl~~IpF---nDDvtarvLelL~~~~~~~ 151 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYSTGA--------------LPQFYPLKG---GYSDHATF---NDNGMAYALTVLDFAANKR 151 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTTSC--------------CBSEESCCS---GGGGSEEC---GGGHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHhccCCCCC--------------ccccCCCcc---cccccCCc---chHHHHHHHHHHHHHHhcc
Confidence 467889999999999999966653 211 1110 01111111 127888888888877542
Q ss_pred --cc---CCCHHHHHHHHHHHHHHHHHHHhcC
Q 043219 187 --FK---PYNSSYSELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 187 --fk---~~D~~yA~~~L~~A~~ay~~a~~~~ 213 (591)
|. -.|+.. .+...+.+++-+|..+.+
T Consensus 152 ~~~~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 152 APFDTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp TTSCSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred CCccccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 21 134556 777788888888887764
No 42
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=44.78 E-value=1e+02 Score=32.07 Aligned_cols=85 Identities=12% Similarity=0.032 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHHHHhhhhccCCCeEEEEeCCCCCCCCCCCC--CCCCCCCcceeecCCCCCChHHHHHHHHHHHHHHHh
Q 043219 109 QMGHALWAIRWGTDYFMKAHTQPNVLWAQVGDGDSDHYCWER--AEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIA 186 (591)
Q Consensus 109 ~~pdiLdE~kwglDwllkm~~~~g~~y~qVgd~~~dh~~W~~--Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~As~v 186 (591)
.-+...+.++=+++|||.||-.+|+ |.. |+.. -+.-.|+- .=|+++.+.-.|+....-
T Consensus 169 ~~~~y~~Ai~Rgl~wlL~mQ~~nGG--------------WpqFdpdn~---~y~~~IpF---nDDvt~rvle~L~~~~~~ 228 (408)
T 1r76_A 169 EAAPYRDAALKGIEYLLASQFPNGG--------------WPQVWPLEG---GYHDAITY---NDDALVHVAELLSDIAAG 228 (408)
T ss_dssp GCHHHHHHHHHHHHHHHHHSCTTSC--------------CBSBSSCCC---GGGGSEEC---GGGHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHccCCCCC--------------CcCcCcccc---ccccCCCc---CcHHHHHHHHHHHHHHhc
Confidence 3477889999999999999966653 211 2211 11111111 127888888888877662
Q ss_pred ---ccCCCHHHHHHHHHHHHHHHHHHHhcC
Q 043219 187 ---FKPYNSSYSELLLLHAKQLFSFADRFR 213 (591)
Q Consensus 187 ---fk~~D~~yA~~~L~~A~~ay~~a~~~~ 213 (591)
|.-+|+++..+...+.+++-+|..+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 229 RDGFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCcccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 334588899999999999999998764
No 43
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=41.65 E-value=60 Score=37.32 Aligned_cols=70 Identities=7% Similarity=-0.010 Sum_probs=44.8
Q ss_pred ccccCCCceEEEEEEEEEeC-CCCCCcceEEEEecC--C--CCcccceee-cCCce--eecCCCcCCCCCCCeEEEEEEe
Q 043219 507 STWNVGETTYYKHKVIIKNT-SQKPITDLKLTIENL--S--GSLWGLSPT-SENRT--YQLPPWLKVLKPGSQCTFVYVQ 578 (591)
Q Consensus 507 ~~W~~g~~~~~~~~vti~N~-g~~~i~~w~~~~~~~--~--~~~Wn~~~~-~~g~~--~~~psw~~~i~~G~s~~fG~i~ 578 (591)
..|..- |.+.+|++|. ...+.++|+|-|... | .+.=+.+.+ +.|.- +++..=-..|+||++.++=|++
T Consensus 34 ~~~~~~----~~~~~tl~n~~~~~~~~~w~iyf~~~r~i~~~~~~~~~i~~~~gd~~~l~P~~~f~~~~~g~~~~~~~~~ 109 (858)
T 1c7s_A 34 ADWASC----NRVLFTLSNDGQAIDGKDWVIYFHSPRQTLRVDNDQFKIAHLTGDLYKLEPTAKFSGFPAGKAVEIPVVA 109 (858)
T ss_dssp CGGGCE----EEEEEEEEECSSCBCCCCCEEEEECSSCEEEECSTTEEEEECSTTEEEEEECTTCCCBCTTEEEEEEEEE
T ss_pred ccccce----eEEEEEEEcCCCCcCCCCcEEEEecceeeecCCCCCeeEEEEeCeEEEEecCCCCCccCCCCEEEEEEEe
Confidence 345555 9999999999 555667999999864 1 111111222 45643 4432322469999999999976
Q ss_pred cC
Q 043219 579 GG 580 (591)
Q Consensus 579 ~~ 580 (591)
..
T Consensus 110 ~~ 111 (858)
T 1c7s_A 110 EY 111 (858)
T ss_dssp ES
T ss_pred cc
Confidence 54
No 44
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=33.00 E-value=50 Score=28.40 Aligned_cols=44 Identities=27% Similarity=0.403 Sum_probs=27.6
Q ss_pred EEEEeCCCCC--CcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEE
Q 043219 521 VIIKNTSQKP--ITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 521 vti~N~g~~~--i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~f 574 (591)
|+|+|++... |.+|+|.-... .+...+|++|.- -.|+||+++++
T Consensus 21 V~l~N~s~~~~~L~gW~l~r~v~---------~~~~~~y~Fp~~-~~L~pg~~vtI 66 (121)
T 1ifr_A 21 VRLRNKSNEDQSMGNWQIKRQNG---------DDPLLTYRFPPK-FTLKAGQVVTI 66 (121)
T ss_dssp EEEEECSSSCEECTTCEEEEEET---------TSCCEEEECCSS-CEECTTCEEEE
T ss_pred EEEEeCCCCccccCCCEEEEEcC---------CCccEEEEeCCC-cEECCCCEEEE
Confidence 7789988654 45666553211 012356999873 25899999874
No 45
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=32.89 E-value=1.1e+02 Score=25.90 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=20.3
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEec
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIEN 540 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~ 540 (591)
-....++|+|.|..+-.++++.+..
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~ 44 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLV 44 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEE
Confidence 3678899999999887888887653
No 46
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=32.53 E-value=44 Score=29.54 Aligned_cols=44 Identities=27% Similarity=0.472 Sum_probs=27.6
Q ss_pred EEEEeCCCCC--CcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEE
Q 043219 521 VIIKNTSQKP--ITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 521 vti~N~g~~~--i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~f 574 (591)
|+|+|+|... |.+|+|.-... .+...+|++|.- -.|+||+++++
T Consensus 36 V~L~N~s~~~~~L~GW~L~r~v~---------g~~~~~y~Fp~~-~~L~pg~~VtI 81 (139)
T 2lll_A 36 VQLKNNSDKDQSLGNWRIKRQVL---------EGEEIAYKFTPK-YILRAGQMVTV 81 (139)
T ss_dssp EEEEECSSSCEECSSCEEEEEET---------TSCEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCccccCCCEEEEecC---------CCccEEEEECCC-cEECCCCEEEE
Confidence 7799988654 45666653211 012246999873 25899999874
No 47
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=31.90 E-value=87 Score=27.61 Aligned_cols=19 Identities=26% Similarity=0.364 Sum_probs=15.0
Q ss_pred CceEEEEEEEEEeCCCCCC
Q 043219 513 ETTYYKHKVIIKNTSQKPI 531 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~i 531 (591)
+.-.|.+.|+|+|.|..++
T Consensus 31 ~~y~FaY~ItI~N~~~~~v 49 (139)
T 1xq4_A 31 QQYVFAYTVRITNTGSHPA 49 (139)
T ss_dssp TBEEEEEEEEEEECSSSCE
T ss_pred CEEEEEEEEEEEeCCCCCE
Confidence 4446999999999998653
No 48
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=31.51 E-value=90 Score=26.93 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=32.7
Q ss_pred EEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEec
Q 043219 516 YYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQG 579 (591)
Q Consensus 516 ~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~ 579 (591)
-.+..|+|+|.|..+..+.++.+-. |.+. .+. .+ -.|++|++.+|=|.-.
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyv------ng~~--v~t-~~-----v~La~G~s~tv~f~~~ 83 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYI------NGTL--YKN-WT-----VSLGPKEEKVLTFNWT 83 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEE------TTEE--EEE-EE-----EEECTTCEEEEEEEEC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEE------CCEE--Eee-EE-----eccCCCCeEEEEEEEE
Confidence 3788999999999999988887643 2211 111 11 1388888876666543
No 49
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=30.86 E-value=76 Score=27.48 Aligned_cols=19 Identities=21% Similarity=0.315 Sum_probs=15.2
Q ss_pred CceEEEEEEEEEeCCCCCC
Q 043219 513 ETTYYKHKVIIKNTSQKPI 531 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~i 531 (591)
+.-.|.+.|+|+|.|..++
T Consensus 26 ~~y~faY~I~I~N~~~~~v 44 (126)
T 1xvs_A 26 QRFVFAYLITIKNLSSQTV 44 (126)
T ss_dssp TBEEEEEEEEEEECSSSCE
T ss_pred CEEEEEEEEEEEECCCCCE
Confidence 4456999999999998664
No 50
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=29.42 E-value=74 Score=27.87 Aligned_cols=19 Identities=16% Similarity=0.263 Sum_probs=15.1
Q ss_pred CceEEEEEEEEEeCCCCCC
Q 043219 513 ETTYYKHKVIIKNTSQKPI 531 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~i 531 (591)
+.-.|.+.|+|+|.|..++
T Consensus 26 ~~y~faY~ItI~N~~~~~v 44 (134)
T 1tza_A 26 EKYLFSYTITIINLGEQAA 44 (134)
T ss_dssp CCEEEEEEEEEEECSSSCE
T ss_pred CEEEEEEEEEEEeCCCCCE
Confidence 4446999999999998653
No 51
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=29.02 E-value=91 Score=27.00 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=15.2
Q ss_pred CceEEEEEEEEEeCCCCCC
Q 043219 513 ETTYYKHKVIIKNTSQKPI 531 (591)
Q Consensus 513 ~~~~~~~~vti~N~g~~~i 531 (591)
+.-.|.+.|+|+|.|..++
T Consensus 27 ~~y~faY~I~I~N~~~~~v 45 (127)
T 2f1e_A 27 GRYAFAYSIRIQNAGAVPA 45 (127)
T ss_dssp TBEEEEEEEEEEECSSSCE
T ss_pred CEEEEEEEEEEEeCCCCCE
Confidence 3446999999999998664
No 52
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=27.31 E-value=68 Score=28.71 Aligned_cols=44 Identities=27% Similarity=0.405 Sum_probs=27.2
Q ss_pred EEEEeCCCCC--CcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEE
Q 043219 521 VIIKNTSQKP--ITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 521 vti~N~g~~~--i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~f 574 (591)
|+|+|++... |.+|+|.-... .....+|++|.- -.|+||+++++
T Consensus 52 V~L~N~s~~~~~L~GW~L~r~vd---------g~~~~~y~Fp~~-~~L~pg~tVtI 97 (151)
T 1ufg_A 52 VRLRNKSNEDQSMGNWQIRRQNG---------DDPLMTYRFPPK-FTLKAGQVVTI 97 (151)
T ss_dssp EEEEECSSSCEECSSCEEEEEET---------TSCCEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCccccCCCEEEEecC---------CCccEEEEECCC-cEECCCCEEEE
Confidence 7788987653 45666642211 012256999873 35899998874
No 53
>3mnm_A ADP-ribosylation factor-binding protein GGA2; IG-like, beta sandwich, protein transport; HET: MLY; 1.73A {Saccharomyces cerevisiae}
Probab=26.54 E-value=2.3e+02 Score=24.14 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=34.8
Q ss_pred CCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccce
Q 043219 497 NPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLS 549 (591)
Q Consensus 497 ~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~ 549 (591)
.++.|+......-.+- .+..++++|+++.+|++..|....| -.|.++
T Consensus 17 ~~l~I~~~~~~~~~~~----~~i~~~fsN~s~~~it~f~fqaAVP--Ks~kL~ 63 (123)
T 3mnm_A 17 PNLKIEFEISRESNSV----IRIXSFFTNLSSSPISNLVFLLAVP--KSMSLX 63 (123)
T ss_dssp SSEEEEEEEEECSSSC----EEEEEEEEECSSSCEEEEEEEEECC--TTSEEE
T ss_pred CCEEEEEEEEeCCCCe----EEEEEEEecCCCCccccEEEEEecC--cccEEE
Confidence 5677777665544433 7788889999999999999988866 445453
No 54
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=26.25 E-value=43 Score=35.50 Aligned_cols=25 Identities=28% Similarity=0.206 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHh
Q 043219 235 DLLWAATWLYRATNEEYYLKYVVDN 259 (591)
Q Consensus 235 e~~wAAaeLy~aTgd~~Yl~~~~~~ 259 (591)
-++.|.+|||++|+++.|++.+...
T Consensus 430 ~lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 430 YALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3577999999999999999988653
No 55
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=25.11 E-value=1.9e+02 Score=24.19 Aligned_cols=72 Identities=14% Similarity=0.165 Sum_probs=44.5
Q ss_pred CCCeeEEeeccccccCCCceEEEEEEEEEeCCCCCCcceEEEEecCCCCcccceeecCCceeec--CCCcC-CCCCCCeE
Q 043219 496 ENPVEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQL--PPWLK-VLKPGSQC 572 (591)
Q Consensus 496 ~~~~~~~~~~~~~W~~g~~~~~~~~vti~N~g~~~i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~--psw~~-~i~~G~s~ 572 (591)
...+.++.-.... .+| +-+++++|+|+...+++ ....|.+. +..|.++.. ..|.. .|.++++.
T Consensus 23 a~~i~v~~~~~~~-~~g---~l~~~~~l~N~~~~~~~-l~Yrf~Wy---------D~~Gl~v~~~~~~W~~l~l~~~~~~ 88 (112)
T 3o0l_A 23 HSDVDVSAVTTQA-EAG---FLRARGTIISKSPKDQR-LQYKFTWY---------DINGATVEDEGVSWKSLKLHGKQQM 88 (112)
T ss_dssp EEEEEEEEEEEEC-GGG---CEEEEEEEEECSSSCEE-EEEEEEEE---------CTTSCBCCCTTCCCEEEEECTTCEE
T ss_pred cCCEEEeCCEEEe-cCC---eEEEEEEEEeCCCCCEE-EEEEEEEE---------CCCCCCcCCCCCCcEEEEECCCCeE
Confidence 3456666554433 333 38999999999988764 33334332 334433332 36765 47888999
Q ss_pred EEEEEecCC
Q 043219 573 TFVYVQGGP 581 (591)
Q Consensus 573 ~fG~i~~~~ 581 (591)
++=-+...+
T Consensus 89 ~l~~vapn~ 97 (112)
T 3o0l_A 89 QVTALSPNA 97 (112)
T ss_dssp EEEEECSST
T ss_pred EEEEECCCC
Confidence 888876655
No 56
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=23.82 E-value=3.6e+02 Score=27.29 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH--HHhcCCCCCCCCcccCCCCCCCCchHHHHHHHHHHHHHcCchH
Q 043219 174 GETAAALAASAIAFKPYNSSYSELLLLHAKQLFSF--ADRFRGLYDDSIKCAKQFYTSSGYSDDLLWAATWLYRATNEEY 251 (591)
Q Consensus 174 ~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~--a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAaeLy~aTgd~~ 251 (591)
.-++-++..+++++. |++|.+.+.+.++.+++. ..+.|+..+ +. -=.+.....||+.|++++
T Consensus 282 ~Gi~~~l~~~~~~~~--d~~~~~~a~~~~~~~~~~~~~~~~~~LCH----------G~----aG~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 282 PGISLLYLYGGLALD--NDYFVDKAEKILESAMQRKLGIDSYMICH----------GY----SGLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHCTTCCSCCTTT----------SH----HHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhccCCCCCCCCC----------hH----HHHHHHHHHHHHHhCCHH
Confidence 446777788888774 677766666666666653 001111111 11 124667788999999999
Q ss_pred HHHHHHH
Q 043219 252 YLKYVVD 258 (591)
Q Consensus 252 Yl~~~~~ 258 (591)
|++.+.+
T Consensus 346 ~~~~a~~ 352 (409)
T 2g0d_A 346 FDSYMEE 352 (409)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 57
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=23.57 E-value=68 Score=27.60 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=26.0
Q ss_pred EEEEeCCCCC--CcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEE
Q 043219 521 VIIKNTSQKP--ITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 521 vti~N~g~~~--i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~f 574 (591)
|.|+|++... |.+|+|.-... . ....|++|+- -.|+||+++++
T Consensus 27 V~L~N~s~~~~~L~gW~l~r~v~--~--------~~~~y~Fp~~-~~L~pg~~vtV 71 (123)
T 3hn9_A 27 IRLKNTSEQDQPMGGWEMIRKIG--D--------TSVSYKYTSR-YVLKAGQTVTI 71 (123)
T ss_dssp EEEEECSSSCEECTTCEEEEEET--T--------EEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEEeC--C--------CceEEEcCCC-cEECCCCEEEE
Confidence 7788987543 45777753211 0 0124888852 25888888875
No 58
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=23.51 E-value=1.1e+02 Score=27.43 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=29.1
Q ss_pred CCCeeEEeecc--ccccCCCceEEEEEEEEEeCCCCCCc--ceEEEE
Q 043219 496 ENPVEFLHSIA--STWNVGETTYYKHKVIIKNTSQKPIT--DLKLTI 538 (591)
Q Consensus 496 ~~~~~~~~~~~--~~W~~g~~~~~~~~vti~N~g~~~i~--~w~~~~ 538 (591)
.+.+.|.++.. +..... .+..+.|+|+|..||+ +++|+.
T Consensus 7 ~~~l~V~y~~~~~~~~~n~----i~~~~~I~N~g~~~i~Ls~lkiRY 49 (160)
T 2xbt_A 7 NSDLKLLFSNNGAAASSNQ----IYMNMKLQNTGSSTYDLSKITIRY 49 (160)
T ss_dssp CCSEEEEEECTTCCSEESS----EEEEEEEEECSSCCEEGGGEEEEE
T ss_pred CCeEEEEEEeCCCCCCCCE----EEEEEEEEECCCCceecCcEEEEE
Confidence 56788888763 244444 8999999999998884 777763
No 59
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=21.36 E-value=48 Score=29.37 Aligned_cols=87 Identities=15% Similarity=0.193 Sum_probs=51.8
Q ss_pred HHhhhhccC-CCeE--EEEeCCCCCCCCCCCCCCCCCCCcceeecCCC----CCChHHHHHHHHHHHHHHHhccCCCHHH
Q 043219 122 DYFMKAHTQ-PNVL--WAQVGDGDSDHYCWERAEDMTTPREAFKLDQY----HPGSDLAGETAAALAASAIAFKPYNSSY 194 (591)
Q Consensus 122 Dwllkm~~~-~g~~--y~qVgd~~~dh~~W~~Pe~~~~~R~~~~~~~~----~p~s~~a~~~AAalA~As~vfk~~D~~y 194 (591)
.||.|+-++ +|++ |.++.++. .+..|+. .+|....+..+ .-+.+++|-++.-+|...+.++.-+..-
T Consensus 40 ~~~~rl~~dY~GG~W~f~~lsnGg----~ym~P~~--~~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~~ 113 (142)
T 2kmg_A 40 AWMRRLCERYNGAYWHYYALSDGG----FYMAPDL--AGRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTDA 113 (142)
T ss_dssp HHHHHHCTTCCCCCCEEEEETTSC----EEEECCC--CSCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCccCCCCeeEEEEecCCe----eEecCCC--CCcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhcccccc
Confidence 467777655 5665 45666542 2344653 22443322111 2357888888888888888887653222
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 043219 195 SELLLLHAKQLFSFADRFRG 214 (591)
Q Consensus 195 A~~~L~~A~~ay~~a~~~~~ 214 (591)
.+.+.++--+|.+||.+||.
T Consensus 114 ~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 114 ADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp TTTTHHHHHHHHHHGGGSTT
T ss_pred cHHHHHHHHHHHHHHHhCcc
Confidence 23444455799999999984
No 60
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=20.83 E-value=2.3e+02 Score=24.12 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=33.7
Q ss_pred EEEEEEEEeCCCCCCcceEEEEecC-----------CCCcccceeecCCceeecCCCcCCCCCCCeEEEEEEec
Q 043219 517 YKHKVIIKNTSQKPITDLKLTIENL-----------SGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQG 579 (591)
Q Consensus 517 ~~~~vti~N~g~~~i~~w~~~~~~~-----------~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~fG~i~~ 579 (591)
....++|+|.++.+ .+|.++.. -..+|.- + .+..++-+-=...|+||++.+|-..-.
T Consensus 20 v~~~ltv~N~s~~~---v~l~f~Sgq~~Df~v~d~~G~~Vwrw--S-~~~~FtQa~~~~tl~pGE~~~f~~~w~ 87 (120)
T 3isy_A 20 IKFNMSLKNQSERA---IEFQFSTGQKFELVVYDSEHKERYRY--S-KEKMFTQAFQNLTLESGETYDFSDVWK 87 (120)
T ss_dssp EEEEEEEEECSSSC---EEEEESSSCCEEEEEECTTCCEEEET--T-TTCCCCCCCEEEEECTTCEEEEEEEES
T ss_pred EEEEEEEEcCCCCc---EEEEeCCCCEEEEEEECCCCCEEEEc--c-ccchhhhhhceEEECCCCEEEEEEEeC
Confidence 88999999999876 44444322 1234422 1 111233322234689999999887766
No 61
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=20.27 E-value=84 Score=27.84 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=26.6
Q ss_pred EEEEeCCCCC--CcceEEEEecCCCCcccceeecCCceeecCCCcCCCCCCCeEEE
Q 043219 521 VIIKNTSQKP--ITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTF 574 (591)
Q Consensus 521 vti~N~g~~~--i~~w~~~~~~~~~~~Wn~~~~~~g~~~~~psw~~~i~~G~s~~f 574 (591)
|.|+|++... |.+|+|.-... . ...+|++|+- -.|+||+++++
T Consensus 40 V~L~N~s~~~~~LgGW~L~r~v~--g--------~~~~y~FP~~-~~L~pg~~VtV 84 (144)
T 3jt0_A 40 IRLKNTSEQDQPMGGWEMIRKIG--D--------TSVSYKYTSR-YVLKAGQTVTI 84 (144)
T ss_dssp EEEEECSSSCEECTTCEEEEEET--T--------EEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEEeC--C--------CceEEEcCCC-cEECCCCEEEE
Confidence 7789988544 45777753211 0 0124888863 25889998876
Done!