Query 043224
Match_columns 516
No_of_seqs 358 out of 1491
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 04:08:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043224.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043224hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wd2a_ g.44.1.1 (A:) Ariadne- 99.8 3.9E-20 2.9E-24 139.2 1.6 42 277-318 1-45 (60)
2 d1wima_ g.44.1.1 (A:) UbcM4-in 99.6 3E-16 2.2E-20 129.3 6.7 87 120-209 3-92 (94)
3 d2ct7a1 g.44.1.4 (A:8-80) Ring 99.3 1.9E-13 1.4E-17 106.9 -0.2 67 197-267 2-72 (73)
4 d2ct7a1 g.44.1.4 (A:8-80) Ring 98.9 1.3E-10 9.4E-15 90.4 3.0 38 280-317 16-54 (73)
5 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.2 1.7E-07 1.3E-11 67.3 2.4 49 123-180 1-51 (52)
6 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.2 5.1E-07 3.7E-11 71.7 3.7 51 121-182 22-72 (86)
7 d2c2la2 g.44.1.2 (A:225-304) S 98.1 7.9E-07 5.8E-11 69.6 3.5 71 121-212 6-76 (80)
8 d1jm7a_ g.44.1.1 (A:) brca1 RI 98.0 1.3E-06 9.6E-11 71.7 4.3 54 121-183 20-73 (103)
9 d1fbva4 g.44.1.1 (A:356-434) C 98.0 2E-06 1.4E-10 67.1 4.8 47 122-179 23-69 (79)
10 d1g25a_ g.44.1.1 (A:) TFIIH Ma 98.0 1.9E-06 1.4E-10 64.6 4.4 50 122-180 3-55 (65)
11 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.0 1.1E-06 8.4E-11 68.3 2.1 51 120-181 6-56 (78)
12 d1chca_ g.44.1.1 (A:) Immediat 97.9 2.5E-06 1.8E-10 64.6 3.5 47 122-179 5-51 (68)
13 d1v87a_ g.44.1.1 (A:) Deltex p 97.9 4.8E-06 3.5E-10 69.4 5.5 55 121-180 24-94 (114)
14 d1iyma_ g.44.1.1 (A:) EL5 RING 97.8 3.4E-06 2.5E-10 61.0 2.1 48 121-178 4-53 (55)
15 d1jm7b_ g.44.1.1 (B:) bard1 RI 97.7 4.9E-06 3.6E-10 67.4 2.0 46 121-180 21-67 (97)
16 d2baya1 g.44.1.2 (A:1-56) Pre- 97.6 1.2E-05 8.7E-10 58.3 2.9 48 124-183 2-50 (56)
17 d1bora_ g.44.1.1 (A:) Acute pr 97.6 7.3E-06 5.3E-10 59.4 1.5 44 122-180 6-49 (56)
18 d1vyxa_ g.44.1.3 (A:) IE1B pro 97.0 0.0004 2.9E-08 50.5 4.7 51 121-179 5-58 (60)
19 d3dplr1 g.44.1.1 (R:19-106) RI 96.7 0.00065 4.7E-08 53.4 4.5 48 122-179 21-84 (88)
20 d1wgma_ g.44.1.2 (A:) Ubiquiti 96.2 0.0026 1.9E-07 50.9 5.3 51 119-181 19-70 (98)
21 d1v92a_ a.5.2.3 (A:) NSFL1 (p9 96.1 0.0061 4.5E-07 41.6 6.1 41 54-94 4-44 (46)
22 d1g25a_ g.44.1.1 (A:) TFIIH Ma 94.6 0.0079 5.8E-07 44.1 2.5 52 216-296 6-57 (65)
23 d1wd2a_ g.44.1.1 (A:) Ariadne- 94.0 0.012 8.7E-07 42.5 2.4 37 212-252 5-44 (60)
24 d1ur6b_ g.44.1.1 (B:) Not-4 N- 93.3 0.012 9E-07 41.0 1.4 34 236-294 18-51 (52)
25 d2cs3a1 g.44.1.3 (A:8-87) Prot 93.2 0.12 8.9E-06 37.7 6.6 54 119-175 5-61 (80)
26 d1rmda2 g.44.1.1 (A:1-86) V(D) 92.5 0.023 1.7E-06 43.9 2.1 47 215-295 25-71 (86)
27 d1fbva4 g.44.1.1 (A:356-434) C 92.5 0.082 6E-06 39.9 5.2 55 207-295 17-71 (79)
28 d1chca_ g.44.1.1 (A:) Immediat 88.3 0.051 3.7E-06 39.8 0.4 34 280-318 3-37 (68)
29 d1jm7a_ g.44.1.1 (A:) brca1 RI 87.6 0.092 6.7E-06 41.6 1.6 48 215-294 23-70 (103)
30 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 87.2 0.14 9.9E-06 38.3 2.4 46 215-294 10-55 (78)
31 d2di0a1 a.5.2.4 (A:8-70) Activ 87.0 0.76 5.5E-05 32.7 6.1 40 54-93 5-45 (63)
32 d1bora_ g.44.1.1 (A:) Acute pr 86.9 0.16 1.2E-05 35.6 2.5 32 236-296 20-51 (56)
33 d2c2la2 g.44.1.2 (A:225-304) S 86.2 0.22 1.6E-05 37.3 3.2 46 215-294 9-54 (80)
34 d1jm7b_ g.44.1.1 (B:) bard1 RI 83.4 0.43 3.1E-05 36.9 3.8 31 283-318 23-54 (97)
35 d1wffa_ g.80.1.1 (A:) ANUBL1 ( 82.3 0.37 2.7E-05 36.6 2.8 40 282-324 25-68 (85)
36 d2k4xa1 g.41.8.8 (A:1-55) Ribo 81.6 0.26 1.9E-05 34.1 1.5 28 282-309 18-46 (55)
37 d2akla2 g.41.3.5 (A:3-40) Hypo 79.9 0.45 3.3E-05 30.4 2.1 26 283-309 4-30 (38)
38 d1weoa_ g.44.1.1 (A:) Cellulos 79.9 0.78 5.6E-05 34.5 3.8 59 215-301 18-77 (93)
39 d1iyma_ g.44.1.1 (A:) EL5 RING 79.8 0.21 1.5E-05 34.8 0.5 35 282-318 5-40 (55)
40 d1wfha_ g.80.1.1 (A:) Zinc fin 79.4 0.56 4.1E-05 33.6 2.7 39 281-323 14-56 (64)
41 d2baya1 g.44.1.2 (A:1-56) Pre- 78.0 0.27 2E-05 34.2 0.6 34 236-295 14-48 (56)
42 d1wfla_ g.80.1.1 (A:) Zinc fin 76.6 0.71 5.2E-05 34.0 2.7 39 282-324 25-67 (74)
43 d1wfpa_ g.80.1.1 (A:) Zinc fin 72.5 1.1 7.9E-05 33.0 2.7 39 281-323 24-66 (74)
44 d1oqya1 a.5.2.1 (A:160-200) DN 68.1 2.3 0.00017 27.5 3.4 36 56-92 5-40 (41)
45 d1v87a_ g.44.1.1 (A:) Deltex p 66.4 1.4 0.00011 34.7 2.6 11 239-249 60-70 (114)
46 d3dplr1 g.44.1.1 (R:19-106) RI 65.3 1.4 0.0001 33.3 2.2 32 236-293 52-84 (88)
47 d2jnea1 g.41.18.1 (A:1-71) Hyp 61.9 2 0.00014 31.1 2.2 34 283-318 3-42 (71)
48 d1oaia_ a.5.2.3 (A:) FG-bindin 59.9 10 0.00074 26.3 5.8 39 54-92 6-44 (59)
49 d2g3qa1 a.5.2.1 (A:1339-1381) 58.8 6 0.00044 25.5 3.9 27 66-92 14-40 (43)
50 d1efub3 a.5.2.2 (B:1-54) Elong 55.0 18 0.0013 24.5 6.2 48 57-104 6-53 (54)
51 d1k3xa3 g.39.1.8 (A:223-262) E 54.9 2.8 0.0002 26.9 1.8 23 281-303 11-35 (40)
52 d2f9yb1 c.14.1.4 (B:23-285) Ac 54.5 1.2 9E-05 40.8 0.0 28 282-309 2-31 (263)
53 d1wj7a1 a.5.2.1 (A:8-98) Ubiqu 54.1 14 0.001 27.7 6.0 40 54-93 31-70 (91)
54 d1zbdb_ g.50.1.1 (B:) Effector 53.3 2.2 0.00016 34.3 1.5 35 281-316 47-82 (124)
55 d2d8va1 g.43.1.1 (A:8-61) Zinc 52.5 2.3 0.00016 29.0 1.1 29 124-155 3-32 (54)
56 d1wima_ g.44.1.1 (A:) UbcM4-in 51.6 1.6 0.00012 33.0 0.3 35 280-317 3-38 (94)
57 d2hf1a1 b.171.1.1 (A:2-60) Hyp 51.0 3.8 0.00028 28.6 2.2 27 283-309 8-35 (59)
58 d2jnya1 b.171.1.1 (A:1-59) Unc 49.8 4.1 0.0003 28.4 2.2 28 282-309 10-38 (59)
59 d1z60a1 g.49.1.2 (A:328-386) T 49.4 3.2 0.00023 28.9 1.5 35 214-255 16-51 (59)
60 d2pk7a1 b.171.1.1 (A:3-61) Unc 48.7 4.8 0.00035 28.1 2.4 28 282-309 6-34 (59)
61 d1nc8a_ g.40.1.1 (A:) HIV nucl 43.5 3.1 0.00022 24.3 0.6 19 242-260 6-24 (29)
62 d1weoa_ g.44.1.1 (A:) Cellulos 42.2 23 0.0017 26.2 5.5 50 119-177 13-67 (93)
63 d1wiva_ a.5.2.1 (A:) Ubiquitin 41.6 23 0.0017 25.3 5.5 35 58-93 32-66 (73)
64 d2cura1 g.39.1.3 (A:33-63) Fou 41.4 12 0.00085 22.1 2.9 30 125-155 2-31 (31)
65 d1tdza3 g.39.1.8 (A:225-271) D 40.8 5.4 0.00039 26.4 1.6 14 282-295 18-31 (47)
66 d1wgla_ a.5.2.4 (A:) Toll-inte 39.2 19 0.0014 24.8 4.4 37 57-93 11-48 (59)
67 d1z60a1 g.49.1.2 (A:328-386) T 38.3 8.4 0.00061 26.7 2.3 37 121-158 14-51 (59)
68 d1k82a3 g.39.1.8 (A:225-268) D 38.2 6.3 0.00046 25.6 1.5 14 282-295 16-29 (44)
69 d1odha_ d.239.1.1 (A:) Mgcm1 { 37.5 12 0.00085 30.8 3.5 34 253-307 83-118 (158)
70 d1r2za3 g.39.1.8 (A:229-274) D 36.8 6.7 0.00049 25.7 1.5 14 282-295 18-31 (46)
71 d1xb2b1 a.5.2.2 (B:56-111) Elo 36.6 37 0.0027 23.0 5.5 40 56-95 5-44 (56)
72 d1qxfa_ g.41.8.4 (A:) Ribosoma 36.3 12 0.00087 25.8 2.8 30 214-246 8-38 (58)
73 d1wfka_ g.50.1.1 (A:) Zinc fin 36.2 8.9 0.00065 28.7 2.4 34 282-317 9-43 (88)
74 d1mn3a_ a.5.2.4 (A:) Vacuolar 36.1 26 0.0019 23.6 4.6 40 53-92 10-50 (54)
75 d1qkla_ a.143.1.2 (A:) RPB6 {H 36.1 57 0.0041 25.8 7.5 24 41-64 52-75 (127)
76 d2cu8a1 g.39.1.3 (A:8-37) Cyst 35.9 6.1 0.00044 23.5 1.0 12 282-293 2-13 (30)
77 d1vg5a_ a.5.2.1 (A:) Rhomboid 34.9 31 0.0023 24.6 5.3 29 65-93 38-66 (73)
78 d2dasa1 g.39.1.17 (A:8-56) Zin 33.9 5 0.00037 26.5 0.5 26 283-308 14-47 (49)
79 d2exfa1 g.40.1.1 (A:12-53) HIV 31.7 14 0.0011 23.5 2.5 16 244-259 3-18 (42)
80 d1rmda1 g.37.1.1 (A:87-116) V( 31.7 7.7 0.00056 22.9 1.0 23 166-188 2-24 (30)
81 d1joca1 g.50.1.1 (A:1348-1411) 31.6 10 0.00076 26.4 2.0 32 122-153 8-41 (64)
82 d2a1jb1 a.60.2.5 (B:219-296) D 31.5 41 0.003 23.9 5.5 52 49-105 3-59 (78)
83 d1ee8a3 g.39.1.8 (A:211-266) D 31.2 12 0.00085 25.5 2.1 14 282-295 25-38 (56)
84 d1zbdb_ g.50.1.1 (B:) Effector 31.1 43 0.0031 26.1 6.1 35 212-251 47-82 (124)
85 d1pfta_ g.41.3.1 (A:) Transcri 30.7 12 0.00084 25.0 2.0 27 281-307 4-32 (50)
86 d1vqoz1 g.41.8.1 (Z:10-82) Rib 30.4 10 0.00075 27.4 1.8 30 280-309 25-55 (73)
87 d1aipc1 a.5.2.2 (C:2-53) Elong 29.5 73 0.0053 21.1 6.2 40 56-95 3-42 (52)
88 d1wiia_ g.41.3.4 (A:) Hypothet 29.5 8.4 0.00061 28.8 1.1 28 282-309 23-57 (85)
89 d1jj2y_ g.41.8.1 (Y:) Ribosoma 29.3 11 0.0008 27.2 1.7 29 281-309 26-55 (73)
90 d1dsqa_ g.40.1.1 (A:) Nucleic 28.8 11 0.0008 20.9 1.3 18 243-260 3-20 (26)
91 d1wila_ g.50.1.3 (A:) Hypothet 27.2 26 0.0019 25.7 3.6 34 120-154 13-47 (89)
92 d2o35a1 a.293.1.1 (A:2-80) Hyp 26.3 14 0.00099 26.9 1.8 17 145-161 39-55 (79)
93 d1wjia_ a.5.2.1 (A:) Tudor dom 25.8 56 0.0041 22.3 5.2 29 66-94 19-47 (63)
94 d1z67a1 a.259.1.1 (A:3-131) Hy 23.4 42 0.0031 26.7 4.5 47 43-92 56-103 (129)
95 d1x58a1 a.4.1.1 (A:8-56) Hypot 23.3 9.5 0.0007 24.7 0.4 27 377-403 6-32 (49)
96 d1y02a2 g.50.1.1 (A:20-70) Rif 23.0 20 0.0015 23.8 2.1 28 221-251 5-33 (51)
97 d1wfpa_ g.80.1.1 (A:) Zinc fin 22.9 39 0.0029 24.2 3.8 30 120-150 23-52 (74)
98 d1vfya_ g.50.1.1 (A:) vps27p p 22.7 24 0.0017 24.6 2.6 27 221-250 10-37 (67)
99 d2ct1a1 g.37.1.1 (A:44-71) Tra 22.0 11 0.00078 21.5 0.3 12 283-294 3-14 (28)
100 d1ufza_ a.5.9.1 (A:) HBS1-like 21.9 1E+02 0.0076 22.3 6.1 47 46-93 26-74 (83)
101 d1wgna_ a.5.2.1 (A:) Ubiquitin 21.2 71 0.0052 21.8 4.9 36 57-93 21-56 (63)
102 d1wffa_ g.80.1.1 (A:) ANUBL1 ( 21.1 51 0.0037 24.2 4.3 28 123-150 26-53 (85)
103 d2gmga1 a.4.5.82 (A:1-105) Hyp 20.2 15 0.0011 28.3 1.1 8 302-309 69-77 (105)
104 d1v6ga2 g.39.1.3 (A:42-81) Act 20.0 22 0.0016 22.1 1.5 29 123-151 1-29 (40)
No 1
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.9e-20 Score=139.25 Aligned_cols=42 Identities=45% Similarity=1.100 Sum_probs=40.4
Q ss_pred HHhcCcccCCCCCccceecCCCCceeec---cccccccccccccc
Q 043224 277 WISSHTKPCPKCCKPIEKNGGCNMVRCK---CGITFNWISGLEYS 318 (516)
Q Consensus 277 wi~~ntK~CPkC~~~IEKn~GCnhMtC~---C~~~FCw~C~~~w~ 318 (516)
||..|||+||+|+++|||++|||||+|+ ||++|||+|+++|.
T Consensus 1 wi~~ntK~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~ 45 (60)
T d1wd2a_ 1 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE 45 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSG
T ss_pred CchhcCcCCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCccc
Confidence 7889999999999999999999999994 99999999999996
No 2
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3e-16 Score=129.33 Aligned_cols=87 Identities=23% Similarity=0.552 Sum_probs=76.6
Q ss_pred CCcccccccccccCCCCeeec-CCCCcccHHHHHHHHHhhhhcCCccccccccccccc--ccCHHHHHHhhCCCChHHHH
Q 043224 120 SSTFCCNICCDDVSPQEVTTM-DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNV--VCDEAKIRCLVSARDSNIAD 196 (516)
Q Consensus 120 ~~~~~C~IC~e~~~~~~~~~l-~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~--~i~~~~i~~ll~~~~~e~~~ 196 (516)
++...|+||+++++.++++.+ +|+|.||.+||+.|+..+|.+|...+|+||..+|.. .++...|+.+++ +++++
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C~~~~~~~~~~i~~ll~---~~~~~ 79 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVA---AEIMQ 79 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHSC---HHHHH
T ss_pred CCCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCCCCCcccCHHHHHHhCC---HHHHH
Confidence 356789999999988887765 899999999999999999999887889999988865 688999999998 78999
Q ss_pred HHHHHHHHHhhhc
Q 043224 197 KFERFLLESYIDD 209 (516)
Q Consensus 197 ~y~~~~~~~~v~~ 209 (516)
||+++.++..+.+
T Consensus 80 ky~~~~l~~~~~s 92 (94)
T d1wima_ 80 RYKKLQFERSGPS 92 (94)
T ss_dssp HHHHHHHHSSCSS
T ss_pred HHHHHHHHhcccc
Confidence 9999999876644
No 3
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.9e-13 Score=106.85 Aligned_cols=67 Identities=25% Similarity=0.619 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhhcCCCcccCCCCCCCCceEeecCCCcceeecc-CCccccccccccc---CCCCCchhHHHHhHH
Q 043224 197 KFERFLLESYIDDNRRVKWCPSVPHCGNAIQVEADELCEVECA-CGFQFCFSCSSVA---HSPCSCLMWELWSKK 267 (516)
Q Consensus 197 ~y~~~~~~~~v~~~~~~~~CP~~p~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~~~---H~p~~C~~~~~w~~k 267 (516)
+|++++++++|..+++++||| +|++++...++ ...++|+ ||+.||+.|+.+| |.|.+|+++++|++.
T Consensus 2 ~Y~~~l~~~~l~~~~~~k~CP---~C~~~~~~~~~-~~~~~C~~C~~~fC~~C~~~w~~~H~~~tC~~~~~wk~~ 72 (73)
T d2ct7a1 2 LFHKKLTEGVLMRDPKFLWCA---QCSFGFIYERE-QLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRM 72 (73)
T ss_dssp SSSSCCCCSCCCSCCCEECCS---SSCCCEECCCS-CSCEECTTTCCEECSSSCSBCCTTTTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCCC---CCCCEeEECCC-CCEEEcCCCCCeECcccCcchhcCCCCCCHHHHHHHHHc
Confidence 466777888999999999998 79999987765 4568996 9999999999999 999999999999653
No 4
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=1.3e-10 Score=90.42 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=36.7
Q ss_pred cCcccCCCCCccceecCCCCceee-cccccccccccccc
Q 043224 280 SHTKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY 317 (516)
Q Consensus 280 ~ntK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w 317 (516)
.+++.||+|+.+|++++||++|+| +||+.|||.|+.+|
T Consensus 16 ~~~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w 54 (73)
T d2ct7a1 16 PKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 54 (73)
T ss_dssp CCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CCCCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcch
Confidence 478999999999999999999999 89999999999999
No 5
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=1.7e-07 Score=67.34 Aligned_cols=49 Identities=22% Similarity=0.548 Sum_probs=37.6
Q ss_pred ccccccccccCCCC--eeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCH
Q 043224 123 FCCNICCDDVSPQE--VTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDE 180 (516)
Q Consensus 123 ~~C~IC~e~~~~~~--~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~ 180 (516)
.+|+||++++...+ +..++|||.||.+|+..|+... ..+||. |...++.
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~-------~~~CP~--CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE-------NGLCPA--CRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTS-------CCBCTT--TCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhc-------CCCCCc--cCCcCCC
Confidence 47999999986432 3446999999999999997642 247998 9887764
No 6
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.15 E-value=5.1e-07 Score=71.73 Aligned_cols=51 Identities=24% Similarity=0.578 Sum_probs=41.4
Q ss_pred CcccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCHHH
Q 043224 121 STFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEAK 182 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~~ 182 (516)
..++|+||++.+ .+++.++|||.||..|+..|+... .-+||. |...+....
T Consensus 22 ~~l~C~IC~~~~--~~pv~~~CgH~FC~~Ci~~~~~~~-------~~~CP~--Cr~p~~~~~ 72 (86)
T d1rmda2 22 KSISCQICEHIL--ADPVETSCKHLFCRICILRCLKVM-------GSYCPS--CRYPCFPTD 72 (86)
T ss_dssp HHTBCTTTCSBC--SSEEECTTSCEEEHHHHHHHHHHT-------CSBCTT--TCCBCCGGG
T ss_pred cCcCCccCCcch--hcceecCCCChhhHHHHHHHHhhC-------CCcCcc--cCCCCChhh
Confidence 457899999986 567888999999999999999642 236998 998877654
No 7
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.08 E-value=7.9e-07 Score=69.58 Aligned_cols=71 Identities=13% Similarity=0.168 Sum_probs=50.6
Q ss_pred CcccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCHHHHHHhhCCCChHHHHHHHH
Q 043224 121 STFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEAKIRCLVSARDSNIADKFER 200 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~~i~~ll~~~~~e~~~~y~~ 200 (516)
+.+.|+||++-+ .+++.++|||.||..|+..|+... .-.||. |+..+..+. +.. +. -.+
T Consensus 6 ~~l~CpIc~~l~--~dPv~~~cGhtfc~~ci~~~l~~~-------~~~cP~--c~~~l~~~~---l~p--N~-----~L~ 64 (80)
T d2c2la2 6 DYLCGKISFELM--REPCITPSGITYDRKDIEEHLQRV-------GHFNPV--TRSPLTQEQ---LIP--NL-----AMK 64 (80)
T ss_dssp STTBCTTTCSBC--SSEEECSSCCEEETTHHHHHHHHT-------CSSCTT--TCCCCCGGG---CEE--CH-----HHH
T ss_pred ccccCcCcCchh--hhhcccCCcCeecHHHHHHHHhcC-------CccCCC--ccccccccc---ccc--HH-----HHH
Confidence 678999999987 567889999999999999998642 236987 887776543 222 11 124
Q ss_pred HHHHHhhhcCCC
Q 043224 201 FLLESYIDDNRR 212 (516)
Q Consensus 201 ~~~~~~v~~~~~ 212 (516)
.+++.|++.++.
T Consensus 65 ~~I~~~l~~~~~ 76 (80)
T d2c2la2 65 EVIDAFISENGW 76 (80)
T ss_dssp HHHHHHHTTCSC
T ss_pred HHHHHHHHHCCC
Confidence 456667776663
No 8
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04 E-value=1.3e-06 Score=71.66 Aligned_cols=54 Identities=22% Similarity=0.541 Sum_probs=42.2
Q ss_pred CcccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCHHHH
Q 043224 121 STFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEAKI 183 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~~i 183 (516)
....|+||++.+ .+++.++|||.||..|+..|+... . ....||. |...+....+
T Consensus 20 ~~l~CpIC~~~~--~~pv~~~CgH~fC~~Ci~~~~~~~--~---~~~~CP~--Cr~~~~~~~l 73 (103)
T d1jm7a_ 20 KILECPICLELI--KEPVSTKCDHIFCKFCMLKLLNQK--K---GPSQCPL--CKNDITKRSL 73 (103)
T ss_dssp HHTSCSSSCCCC--SSCCBCTTSCCCCSHHHHHHHHSS--S---SSCCCTT--TSCCCCTTTC
T ss_pred cCcCCCccCchh--CCeEEcCCCCchhhHHHHHHHHHC--C---CCCcCcC--CCCcCChhhC
Confidence 346899999986 467778999999999999998653 1 2357998 9988875543
No 9
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.03 E-value=2e-06 Score=67.15 Aligned_cols=47 Identities=26% Similarity=0.605 Sum_probs=38.0
Q ss_pred cccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccC
Q 043224 122 TFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCD 179 (516)
Q Consensus 122 ~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~ 179 (516)
...|+||++.+ .+++.++|||.||.+|+..|+... .-+||. |+..|.
T Consensus 23 ~~~C~IC~~~~--~~~~~~~CgH~fC~~Ci~~wl~~~-------~~~CP~--Cr~~i~ 69 (79)
T d1fbva4 23 FQLCKICAEND--KDVKIEPCGHLMCTSCLTSWQESE-------GQGCPF--CRCEIK 69 (79)
T ss_dssp TTBCTTTSSSB--CCEECSSSCCEECHHHHHHHHHTT-------CCSCTT--TCCCCC
T ss_pred CCCCccCCCcC--CCeEEeCCCCeeeHHHHHHHHHHC-------cCcCCC--CCcCcc
Confidence 34699999986 567888999999999999998642 236998 988765
No 10
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02 E-value=1.9e-06 Score=64.64 Aligned_cols=50 Identities=22% Similarity=0.513 Sum_probs=37.2
Q ss_pred cccccccccccC--C-CCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCH
Q 043224 122 TFCCNICCDDVS--P-QEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDE 180 (516)
Q Consensus 122 ~~~C~IC~e~~~--~-~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~ 180 (516)
..+|+||++++. . ..+...+|||.||.+|+..|+... . -+||. |...+..
T Consensus 3 d~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~----~---~~CP~--CR~~i~~ 55 (65)
T d1g25a_ 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG----A---GNCPE--CGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT----S---SSCTT--TCCCCSS
T ss_pred CCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcC----c---CCCCC--CCcCccc
Confidence 468999998742 1 234556999999999999999642 1 26998 9987754
No 11
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.95 E-value=1.1e-06 Score=68.26 Aligned_cols=51 Identities=12% Similarity=0.201 Sum_probs=40.4
Q ss_pred CCcccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCHH
Q 043224 120 SSTFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEA 181 (516)
Q Consensus 120 ~~~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~ 181 (516)
.+.+.|+||++.+ .+++.++|||.||+.|+..|+... .-.||. |+..+...
T Consensus 6 P~~l~CpIc~~~m--~dPV~~~cgh~fc~~ci~~~~~~~-------~~~cP~--~~~~l~~~ 56 (78)
T d1t1ha_ 6 PEYFRCPISLELM--KDPVIVSTGQTYERSSIQKWLDAG-------HKTCPK--SQETLLHA 56 (78)
T ss_dssp SSSSSCTTTSCCC--SSEEEETTTEEEEHHHHHHHHTTT-------CCBCTT--TCCBCSSC
T ss_pred CccCCCcCcCchh--hCceEccCCCcchHHHHHHHHHHC-------CCCCCc--ccccCCcc
Confidence 3679999999987 567888999999999999998642 236887 77766644
No 12
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=97.93 E-value=2.5e-06 Score=64.55 Aligned_cols=47 Identities=30% Similarity=0.612 Sum_probs=37.4
Q ss_pred cccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccC
Q 043224 122 TFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCD 179 (516)
Q Consensus 122 ~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~ 179 (516)
...|+||++.+. +..+.++|||.||..|+..|+..+ -+||. |...+.
T Consensus 5 ~d~C~IC~~~~~-~~~~~~~C~H~Fc~~Ci~~w~~~~--------~~CP~--CR~~i~ 51 (68)
T d1chca_ 5 AERCPICLEDPS-NYSMALPCLHAFCYVCITRWIRQN--------PTCPL--CKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCC-SCEEETTTTEEESTTHHHHHHHHS--------CSTTT--TCCCCC
T ss_pred CCCCccCCcCcc-CCcEEeCCCCcCcHHHHHHHHHhC--------CcCCC--CCcchH
Confidence 456999999874 345667999999999999999742 36998 988654
No 13
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.91 E-value=4.8e-06 Score=69.37 Aligned_cols=55 Identities=22% Similarity=0.504 Sum_probs=40.6
Q ss_pred CcccccccccccCCC----------------CeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCH
Q 043224 121 STFCCNICCDDVSPQ----------------EVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDE 180 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~----------------~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~ 180 (516)
....|+||++++... ....++|||.||..|+..|+..+-..| .++||. |..++..
T Consensus 24 ~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~---~~~CP~--CR~~~~~ 94 (114)
T d1v87a_ 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDG---SLQCPS--CKTIYGE 94 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSS---CCBCTT--TCCBSSS
T ss_pred ccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCC---CCcccc--ccchhcc
Confidence 345799999986421 123468999999999999998753333 478998 9887653
No 14
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=97.79 E-value=3.4e-06 Score=61.03 Aligned_cols=48 Identities=21% Similarity=0.547 Sum_probs=36.8
Q ss_pred CcccccccccccCCCC-eeec-CCCCcccHHHHHHHHHhhhhcCCccccccccccccccc
Q 043224 121 STFCCNICCDDVSPQE-VTTM-DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVC 178 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~-~~~l-~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i 178 (516)
+..+|+||++++..++ +..+ .|+|.||..|+..|+..+ -+||. |...|
T Consensus 4 d~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~--------~~CP~--CR~~i 53 (55)
T d1iyma_ 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSH--------STCPL--CRLTV 53 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTC--------CSCSS--SCCCS
T ss_pred CCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhC--------CcCCC--CCCEe
Confidence 3467999999987544 4445 799999999999998642 26998 88654
No 15
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71 E-value=4.9e-06 Score=67.35 Aligned_cols=46 Identities=24% Similarity=0.592 Sum_probs=35.3
Q ss_pred CcccccccccccCCCCeeec-CCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCH
Q 043224 121 STFCCNICCDDVSPQEVTTM-DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDE 180 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l-~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~ 180 (516)
..++|+||++.+ .+++.+ .|||.||..|+..|+.. +||. |...+..
T Consensus 21 ~~l~C~IC~~~~--~~pv~~~~CgH~fC~~Ci~~~~~~----------~CP~--Cr~~~~~ 67 (97)
T d1jm7b_ 21 KLLRCSRCTNIL--REPVCLGGCEHIFCSNCVSDCIGT----------GCPV--CYTPAWI 67 (97)
T ss_dssp HTTSCSSSCSCC--SSCBCCCSSSCCBCTTTGGGGTTT----------BCSS--SCCBCSC
T ss_pred hcCCCccCCchh--hcCceeCCCCCchhHHHHHHHHhc----------cccc--cCCcCch
Confidence 357899999987 345554 89999999999888632 4998 9876543
No 16
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.63 E-value=1.2e-05 Score=58.26 Aligned_cols=48 Identities=10% Similarity=-0.051 Sum_probs=38.2
Q ss_pred cccccccccCCCCeeec-CCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCHHHH
Q 043224 124 CCNICCDDVSPQEVTTM-DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEAKI 183 (516)
Q Consensus 124 ~C~IC~e~~~~~~~~~l-~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~~i 183 (516)
.|+||++.+ .+.+.+ .|||.||++|+.+|+... -+||. |+..+..+++
T Consensus 2 ~C~Ic~~~~--~~Pv~~~~cGh~fc~~cI~~~l~~~--------~~CP~--c~~~l~~~dL 50 (56)
T d2baya1 2 LCAISGKVP--RRPVLSPKSRTIFEKSLLEQYVKDT--------GNDPI--TNEPLSIEEI 50 (56)
T ss_dssp CCTTTCSCC--SSEEEETTTTEEEEHHHHHHHHHHH--------SBCTT--TCCBCCGGGC
T ss_pred CCccCCchH--HhcCccCCCCCcccHHHHHHHHhhc--------cCCCc--cCCcCCHHhc
Confidence 699999986 455554 799999999999999863 25998 8888876543
No 17
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61 E-value=7.3e-06 Score=59.45 Aligned_cols=44 Identities=18% Similarity=0.548 Sum_probs=34.4
Q ss_pred cccccccccccCCCCeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccCH
Q 043224 122 TFCCNICCDDVSPQEVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDE 180 (516)
Q Consensus 122 ~~~C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~ 180 (516)
..+|+||++.+ .+...++|||.||..|+.+ ...+||. |...++.
T Consensus 6 ~l~C~IC~~~~--~~p~~lpCgH~fC~~Ci~~-----------~~~~CP~--Cr~~~~~ 49 (56)
T d1bora_ 6 FLRCQQCQAEA--KCPKLLPCLHTLCSGCLEA-----------SGMQCPI--CQAPWPL 49 (56)
T ss_dssp CSSCSSSCSSC--BCCSCSTTSCCSBTTTCSS-----------SSSSCSS--CCSSSSC
T ss_pred CCCCcccCccc--CCCEEecCCCHHhHHHHHc-----------CCCcCcC--CCCcccC
Confidence 46899999987 4567789999999999742 2457998 9887653
No 18
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=96.95 E-value=0.0004 Score=50.49 Aligned_cols=51 Identities=16% Similarity=0.409 Sum_probs=36.5
Q ss_pred CcccccccccccCCCCeeec---CCCCcccHHHHHHHHHhhhhcCCcccccccccccccccC
Q 043224 121 STFCCNICCDDVSPQEVTTM---DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCD 179 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l---~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~ 179 (516)
....|.||++++........ .|+|.||..|+..|+..+ + ..+||. |...+.
T Consensus 5 d~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~---~---~~~CP~--Cr~~~~ 58 (60)
T d1vyxa_ 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS---R---NTACQI--CGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHH---T---CSBCTT--TCCBCC
T ss_pred CCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhC---C---CCCCcc--cCCeee
Confidence 35679999998754333222 456999999999999765 1 257998 887653
No 19
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.71 E-value=0.00065 Score=53.38 Aligned_cols=48 Identities=21% Similarity=0.366 Sum_probs=34.6
Q ss_pred cccccccccccCCC----------------CeeecCCCCcccHHHHHHHHHhhhhcCCcccccccccccccccC
Q 043224 122 TFCCNICCDDVSPQ----------------EVTTMDCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCD 179 (516)
Q Consensus 122 ~~~C~IC~e~~~~~----------------~~~~l~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~ 179 (516)
...|.||.+++... .+..++|||.||..|+..||... -.||. |...+.
T Consensus 21 ~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~--------~~CP~--CR~~~~ 84 (88)
T d3dplr1 21 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR--------QVCPL--DNREWE 84 (88)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC--------SBCSS--SCSBCC
T ss_pred CCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHC--------CcCCC--CCCccc
Confidence 34588887765321 13456899999999999999752 36998 987654
No 20
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.21 E-value=0.0026 Score=50.87 Aligned_cols=51 Identities=8% Similarity=-0.028 Sum_probs=38.1
Q ss_pred CCCcccccccccccCCCCeeecCCC-CcccHHHHHHHHHhhhhcCCcccccccccccccccCHH
Q 043224 119 CSSTFCCNICCDDVSPQEVTTMDCG-HCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVVCDEA 181 (516)
Q Consensus 119 ~~~~~~C~IC~e~~~~~~~~~l~Cg-H~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~i~~~ 181 (516)
.+..+.|+||.+-+ .+++.+.|+ |.||+.|+..|+.. +. .||. |+..+..+
T Consensus 19 ~P~~f~CPI~~~lm--~dPV~~~~~~~ty~r~~I~~~l~~----~~----~~P~--~~~~l~~~ 70 (98)
T d1wgma_ 19 ACDEFLDPIMSTLM--CDPVVLPSSRVTVDRSTIARHLLS----DQ----TDPF--NRSPLTMD 70 (98)
T ss_dssp CCTTTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHTTT----SC----BCTT--TCSBCCTT
T ss_pred CcHHhCCcCchhHH--HHHHhcccccchhhHHHHHHHHHh----cC----Cccc--ccccccch
Confidence 34679999999986 677777665 58999999999853 12 5887 66666653
No 21
>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.12 E-value=0.0061 Score=41.60 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhhh
Q 043224 54 AQMGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVEE 94 (516)
Q Consensus 54 ~~~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e~ 94 (516)
.+++.|.+..+|+|.++..|+..|...+||.+..+..||+.
T Consensus 4 ~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~ 44 (46)
T d1v92a_ 4 ERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44 (46)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999964
No 22
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.57 E-value=0.0079 Score=44.05 Aligned_cols=52 Identities=25% Similarity=0.587 Sum_probs=33.3
Q ss_pred CCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccceec
Q 043224 216 CPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEKN 295 (516)
Q Consensus 216 CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEKn 295 (516)
|| =|...+...+.. ..+.-+|||.||..|. ..|+..+.+.||.|+.+|.++
T Consensus 6 Cp---IC~~~~~~~~~~-~~~~~~C~H~fc~~Ci-------------------------~~~~~~~~~~CP~CR~~i~~~ 56 (65)
T d1g25a_ 6 CP---RCKTTKYRNPSL-KLMVNVCGHTLCESCV-------------------------DLLFVRGAGNCPECGTPLRKS 56 (65)
T ss_dssp CS---TTTTHHHHCSSC-CEEECTTCCCEEHHHH-------------------------HHHHHTTSSSCTTTCCCCSSC
T ss_pred CC---cCCceeecCCce-EEEeCccChHhhHHHH-------------------------HHHhCcCcCCCCCCCcCcccc
Confidence 66 465443332222 2345579999999995 235545557899999998765
Q ss_pred C
Q 043224 296 G 296 (516)
Q Consensus 296 ~ 296 (516)
+
T Consensus 57 ~ 57 (65)
T d1g25a_ 57 N 57 (65)
T ss_dssp C
T ss_pred c
Confidence 3
No 23
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.03 E-value=0.012 Score=42.48 Aligned_cols=37 Identities=27% Similarity=0.687 Sum_probs=29.4
Q ss_pred CcccCCCCCCCCceEeecCCCcceeecc---CCccccccccccc
Q 043224 212 RVKWCPSVPHCGNAIQVEADELCEVECA---CGFQFCFSCSSVA 252 (516)
Q Consensus 212 ~~~~CP~~p~C~~~i~~~~~~~~~v~C~---Cg~~fC~~C~~~~ 252 (516)
+.+.|| .|+..|...++- ..++|. ||+.||+.|+++|
T Consensus 5 ntK~CP---~C~~~ieK~~GC-nhM~C~~~~C~~~fCw~C~~~~ 44 (60)
T d1wd2a_ 5 NTKECP---KCHVTIEKDGGC-NHMVCRNQNCKAEFCWVCLGPW 44 (60)
T ss_dssp CCCCCT---TTCCCCSSCCSC-CSSSCCSSGGGSCCSSSSCSCS
T ss_pred cCcCCC---CCCCeEEECCCC-CCeEeCCCCCCCeEECCCCCcc
Confidence 457898 799999976543 358894 9999999999865
No 24
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.33 E-value=0.012 Score=40.97 Aligned_cols=34 Identities=32% Similarity=0.829 Sum_probs=25.2
Q ss_pred eeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCcccee
Q 043224 236 VECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEK 294 (516)
Q Consensus 236 v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEK 294 (516)
+.++|||.||..|. .+ |+......||.|+.++..
T Consensus 18 ~~~~CgH~~c~~C~------------~~-------------w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 18 FPCTCGYQICRFCW------------HR-------------IRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CSSSSSCCCCHHHH------------HH-------------HTTTSCCBCTTTCCBCSC
T ss_pred EecCCCCccchHHH------------HH-------------HHhhcCCCCCccCCcCCC
Confidence 46789999999994 22 444445679999998764
No 25
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.20 E-value=0.12 Score=37.65 Aligned_cols=54 Identities=26% Similarity=0.592 Sum_probs=39.3
Q ss_pred CCCcccccccccccCCCCeeecC--CCCcccHHHHHHHHHhhhhcCCcccccccc-cccc
Q 043224 119 CSSTFCCNICCDDVSPQEVTTMD--CGHCFCNNCWTEHFIVKINDGQSRRIKCMA-LKCN 175 (516)
Q Consensus 119 ~~~~~~C~IC~e~~~~~~~~~l~--CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~-~~C~ 175 (516)
++....|.+|-+.+....++..+ =+|.||..|-+.+|..+-..+. +.||. .+|.
T Consensus 5 ~~~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~q~~~~e---vyCPSG~kCp 61 (80)
T d2cs3a1 5 NSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGE---VYCPSGEKCP 61 (80)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSC---CCCTTSSCCB
T ss_pred CCCceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHhcCCCCc---EECCCCCccc
Confidence 34568899999988655554432 2799999999999999877654 67775 2444
No 26
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.55 E-value=0.023 Score=43.95 Aligned_cols=47 Identities=28% Similarity=0.598 Sum_probs=32.6
Q ss_pred cCCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCcccee
Q 043224 215 WCPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEK 294 (516)
Q Consensus 215 ~CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEK 294 (516)
-|| =|...+.. .|.-+|||.||..|- ..|+....+.||.|+.++..
T Consensus 25 ~C~---IC~~~~~~------pv~~~CgH~FC~~Ci-------------------------~~~~~~~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 25 SCQ---ICEHILAD------PVETSCKHLFCRICI-------------------------LRCLKVMGSYCPSCRYPCFP 70 (86)
T ss_dssp BCT---TTCSBCSS------EEECTTSCEEEHHHH-------------------------HHHHHHTCSBCTTTCCBCCG
T ss_pred CCc---cCCcchhc------ceecCCCChhhHHHH-------------------------HHHHhhCCCcCcccCCCCCh
Confidence 488 57655431 255579999999994 23555555789999998865
Q ss_pred c
Q 043224 295 N 295 (516)
Q Consensus 295 n 295 (516)
.
T Consensus 71 ~ 71 (86)
T d1rmda2 71 T 71 (86)
T ss_dssp G
T ss_pred h
Confidence 4
No 27
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.45 E-value=0.082 Score=39.89 Aligned_cols=55 Identities=24% Similarity=0.517 Sum_probs=35.9
Q ss_pred hhcCCCcccCCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCC
Q 043224 207 IDDNRRVKWCPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCP 286 (516)
Q Consensus 207 v~~~~~~~~CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CP 286 (516)
.+......-|| =|-..+. ..+.=+|||.||..|- ..|+..+.+.||
T Consensus 17 ~~~~~~~~~C~---IC~~~~~------~~~~~~CgH~fC~~Ci-------------------------~~wl~~~~~~CP 62 (79)
T d1fbva4 17 CEMGSTFQLCK---ICAENDK------DVKIEPCGHLMCTSCL-------------------------TSWQESEGQGCP 62 (79)
T ss_dssp HTTSCCTTBCT---TTSSSBC------CEECSSSCCEECHHHH-------------------------HHHHHTTCCSCT
T ss_pred HhcCCCCCCCc---cCCCcCC------CeEEeCCCCeeeHHHH-------------------------HHHHHHCcCcCC
Confidence 33344444588 4743321 1244469999999984 236666678899
Q ss_pred CCCccceec
Q 043224 287 KCCKPIEKN 295 (516)
Q Consensus 287 kC~~~IEKn 295 (516)
-|+..|.+.
T Consensus 63 ~Cr~~i~~~ 71 (79)
T d1fbva4 63 FCRCEIKGT 71 (79)
T ss_dssp TTCCCCCCC
T ss_pred CCCcCccCC
Confidence 999999764
No 28
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=88.29 E-value=0.051 Score=39.80 Aligned_cols=34 Identities=15% Similarity=0.376 Sum_probs=27.4
Q ss_pred cCcccCCCCCccceecCCCCceee-ccccccccccccccc
Q 043224 280 SHTKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEYS 318 (516)
Q Consensus 280 ~ntK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w~ 318 (516)
+....||=|.-.+.. ..++ .|||.||+.|+..|-
T Consensus 3 ~~~d~C~IC~~~~~~-----~~~~~~C~H~Fc~~Ci~~w~ 37 (68)
T d1chca_ 3 TVAERCPICLEDPSN-----YSMALPCLHAFCYVCITRWI 37 (68)
T ss_dssp CCCCCCSSCCSCCCS-----CEEETTTTEEESTTHHHHHH
T ss_pred CCCCCCccCCcCccC-----CcEEeCCCCcCcHHHHHHHH
Confidence 456789999887742 3567 799999999999995
No 29
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.57 E-value=0.092 Score=41.55 Aligned_cols=48 Identities=29% Similarity=0.586 Sum_probs=30.4
Q ss_pred cCCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCcccee
Q 043224 215 WCPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEK 294 (516)
Q Consensus 215 ~CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEK 294 (516)
-|| =|...+.. .|.-+|||.||..|-. .|... ..++..||-|+.++..
T Consensus 23 ~Cp---IC~~~~~~------pv~~~CgH~fC~~Ci~------------~~~~~-----------~~~~~~CP~Cr~~~~~ 70 (103)
T d1jm7a_ 23 ECP---ICLELIKE------PVSTKCDHIFCKFCML------------KLLNQ-----------KKGPSQCPLCKNDITK 70 (103)
T ss_dssp SCS---SSCCCCSS------CCBCTTSCCCCSHHHH------------HHHHS-----------SSSSCCCTTTSCCCCT
T ss_pred CCC---ccCchhCC------eEEcCCCCchhhHHHH------------HHHHH-----------CCCCCcCcCCCCcCCh
Confidence 488 58665431 1455799999999952 22210 1234689999988754
No 30
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.22 E-value=0.14 Score=38.31 Aligned_cols=46 Identities=22% Similarity=0.416 Sum_probs=32.1
Q ss_pred cCCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCcccee
Q 043224 215 WCPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEK 294 (516)
Q Consensus 215 ~CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEK 294 (516)
-|| =|..++.- -|..+|||.||..|- ..|+..+...||.|+.++..
T Consensus 10 ~Cp---Ic~~~m~d------PV~~~cgh~fc~~ci-------------------------~~~~~~~~~~cP~~~~~l~~ 55 (78)
T d1t1ha_ 10 RCP---ISLELMKD------PVIVSTGQTYERSSI-------------------------QKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SCT---TTSCCCSS------EEEETTTEEEEHHHH-------------------------HHHHTTTCCBCTTTCCBCSS
T ss_pred CCc---CcCchhhC------ceEccCCCcchHHHH-------------------------HHHHHHCCCCCCcccccCCc
Confidence 577 47665532 266689999999884 23566666789999887653
No 31
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.98 E-value=0.76 Score=32.73 Aligned_cols=40 Identities=30% Similarity=0.337 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHc-CCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 54 AQMGDLLRVMDLL-SLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 54 ~~~~~i~~v~~~l-~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
++...|..|.++| .+..+....+|.+|+-|.|.++....+
T Consensus 5 el~s~I~qV~Dl~PdLG~GFi~~~L~~Y~~n~E~vI~~lLe 45 (63)
T d2di0a1 5 ELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILE 45 (63)
T ss_dssp HHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 4677899999999 799999999999999999999999985
No 32
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.86 E-value=0.16 Score=35.55 Aligned_cols=32 Identities=22% Similarity=0.525 Sum_probs=23.8
Q ss_pred eeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccceecC
Q 043224 236 VECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEKNG 296 (516)
Q Consensus 236 v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEKn~ 296 (516)
+..+|||.||..|...+ ...||.|+.+|....
T Consensus 20 ~~lpCgH~fC~~Ci~~~-----------------------------~~~CP~Cr~~~~~~~ 51 (56)
T d1bora_ 20 KLLPCLHTLCSGCLEAS-----------------------------GMQCPICQAPWPLGA 51 (56)
T ss_dssp SCSTTSCCSBTTTCSSS-----------------------------SSSCSSCCSSSSCCS
T ss_pred EEecCCCHHhHHHHHcC-----------------------------CCcCcCCCCcccCCC
Confidence 45689999999996321 257999999886543
No 33
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.24 E-value=0.22 Score=37.26 Aligned_cols=46 Identities=7% Similarity=-0.004 Sum_probs=31.6
Q ss_pred cCCCCCCCCceEeecCCCcceeeccCCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCcccee
Q 043224 215 WCPSVPHCGNAIQVEADELCEVECACGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEK 294 (516)
Q Consensus 215 ~CP~~p~C~~~i~~~~~~~~~v~C~Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEK 294 (516)
.|| =|..++.- -|.-+|||.||..|-. .|+..+...||.|+.++..
T Consensus 9 ~Cp---Ic~~l~~d------Pv~~~cGhtfc~~ci~-------------------------~~l~~~~~~cP~c~~~l~~ 54 (80)
T d2c2la2 9 CGK---ISFELMRE------PCITPSGITYDRKDIE-------------------------EHLQRVGHFNPVTRSPLTQ 54 (80)
T ss_dssp BCT---TTCSBCSS------EEECSSCCEEETTHHH-------------------------HHHHHTCSSCTTTCCCCCG
T ss_pred cCc---CcCchhhh------hcccCCcCeecHHHHH-------------------------HHHhcCCccCCCccccccc
Confidence 587 57766542 1555799999998841 2444555679999988754
No 34
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.41 E-value=0.43 Score=36.94 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=25.8
Q ss_pred ccCCCCCccceecCCCCceee-ccccccccccccccc
Q 043224 283 KPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEYS 318 (516)
Q Consensus 283 K~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w~ 318 (516)
-.||-|...+.. -+++ .|||.||..|...|-
T Consensus 23 l~C~IC~~~~~~-----pv~~~~CgH~fC~~Ci~~~~ 54 (97)
T d1jm7b_ 23 LRCSRCTNILRE-----PVCLGGCEHIFCSNCVSDCI 54 (97)
T ss_dssp TSCSSSCSCCSS-----CBCCCSSSCCBCTTTGGGGT
T ss_pred CCCccCCchhhc-----CceeCCCCCchhHHHHHHHH
Confidence 479999988853 3666 799999999999996
No 35
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.35 E-value=0.37 Score=36.63 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=31.4
Q ss_pred cccCCCCCccceecCCCCceeeccccccccccccccc--c--cccCC
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYS--N--GYIEV 324 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC~C~~~FCw~C~~~w~--C--~y~~~ 324 (516)
.++|..|++.|.-..| ++|+|+..||-...-+-. | .|+..
T Consensus 25 ~~RC~~C~KKl~l~~~---~~CrCg~~FC~~HR~pe~H~CtfDyK~~ 68 (85)
T d1wffa_ 25 MKHCFLCGKKTGLATS---FECRCGNNFCASHRYAEAHGCNYDYKSA 68 (85)
T ss_dssp CCBCSSSCCBCSSSSC---EECTTCCEECTTTCSTGGGTCCSCCSSS
T ss_pred CCcChhcCCeecCCcC---eecCCCCEehhhcCCCcCcCCCcchHHH
Confidence 3589999998865433 899999999999999865 8 56543
No 36
>d2k4xa1 g.41.8.8 (A:1-55) Ribosomal protein S27ae {Thermoplasma acidophilum [TaxId: 2303]}
Probab=81.57 E-value=0.26 Score=34.07 Aligned_cols=28 Identities=25% Similarity=0.622 Sum_probs=20.4
Q ss_pred cccCCCCCccceecCCCCceee-cccccc
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
-+.||+|+.-|.--.-=|.++| +||+-.
T Consensus 18 ~k~CP~CG~GvFmA~H~dR~~CGKCgyTe 46 (55)
T d2k4xa1 18 HRFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred cCcCcCCCCcEEeeecCCCccccCCcccE
Confidence 4789999876654444478999 898753
No 37
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=79.91 E-value=0.45 Score=30.37 Aligned_cols=26 Identities=27% Similarity=0.896 Sum_probs=19.7
Q ss_pred ccCCCCCccceecCCCCceee-cccccc
Q 043224 283 KPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 283 K~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
-.||+|+.-.-=..| ..+.| -|+|+|
T Consensus 4 P~CP~C~seytYedg-~l~vCPeC~hEW 30 (38)
T d2akla2 4 PPCPQCNSEYTYEDG-ALLVCPECAHEW 30 (38)
T ss_dssp CCCTTTCCCCCEECS-SSEEETTTTEEE
T ss_pred CcCCCCCCcceEcCC-CEEECCcccCcC
Confidence 479999986655555 57889 799886
No 38
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=79.91 E-value=0.78 Score=34.54 Aligned_cols=59 Identities=29% Similarity=0.665 Sum_probs=43.6
Q ss_pred cCCCCCCCCceEeecCCCcceeecc-CCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccce
Q 043224 215 WCPSVPHCGNAIQVEADELCEVECA-CGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIE 293 (516)
Q Consensus 215 ~CP~~p~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IE 293 (516)
-|- -|+--|-.......-|-|. |+.-.|..|. ++ -++..++.||.|+.+..
T Consensus 18 ~Cq---iCGd~VG~~~~Ge~FVAC~eC~FPvCrpCy----------EY---------------ErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 18 FCE---ICGDQIGLTVEGDLFVACNECGFPACRPCY----------EY---------------ERREGTQNCPQCKTRYK 69 (93)
T ss_dssp BCS---SSCCBCCBCSSSSBCCSCSSSCCCCCHHHH----------HH---------------HHHTSCSSCTTTCCCCC
T ss_pred hhh---hcccccccCCCCCEEEEecccCCccchHHH----------HH---------------HHhccCccCcccCChhh
Confidence 465 5888777766666779997 9999998774 22 13456799999999999
Q ss_pred ecCCCCce
Q 043224 294 KNGGCNMV 301 (516)
Q Consensus 294 Kn~GCnhM 301 (516)
+-.|+-.|
T Consensus 70 r~kgsprv 77 (93)
T d1weoa_ 70 RLRGSPRV 77 (93)
T ss_dssp CCTTCCCC
T ss_pred hhcCCCCC
Confidence 88776543
No 39
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=79.83 E-value=0.21 Score=34.82 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=27.5
Q ss_pred cccCCCCCccceecCCCCceee-ccccccccccccccc
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEYS 318 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w~ 318 (516)
...||-|...++.++. -++. .|+|.||+.|...|-
T Consensus 5 ~~~C~ICl~~~~~~~~--~~~l~~C~H~Fh~~Ci~~Wl 40 (55)
T d1iyma_ 5 GVECAVCLAELEDGEE--ARFLPRCGHGFHAECVDMWL 40 (55)
T ss_dssp SCCCTTTCCCCCTTSC--CEECSSSCCEECTTHHHHTT
T ss_pred CCCCeEECccccCCCE--EEEeCCCCCcccHHHHHHHH
Confidence 3579999988886544 2455 599999999999995
No 40
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=79.39 E-value=0.56 Score=33.60 Aligned_cols=39 Identities=23% Similarity=0.492 Sum_probs=30.6
Q ss_pred CcccCCCCCccceecCCCCceeeccccccccccccccc--c--cccC
Q 043224 281 HTKPCPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYS--N--GYIE 323 (516)
Q Consensus 281 ntK~CPkC~~~IEKn~GCnhMtC~C~~~FCw~C~~~w~--C--~y~~ 323 (516)
...+|..|++.|.-.+ ++|+|+..||-...-+-. | .|+.
T Consensus 14 k~~RC~~C~KKl~l~~----~~CrCg~~FC~~HR~pe~H~CtfDyK~ 56 (64)
T d1wfha_ 14 RPNRCTVCRKRVGLTG----FMCRCGTTFCGSHRYPEVHGCTFDFKS 56 (64)
T ss_dssp SCCCCTTTCCCCCTTC----EECSSSCEECTTTCSTTTTTCCCCCSC
T ss_pred CCCcChhhCCCcccee----eeccCCCEehhhcCCCcCcCCCCcchh
Confidence 3468999998877642 899999999999987765 8 5554
No 41
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.97 E-value=0.27 Score=34.24 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=23.8
Q ss_pred eecc-CCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccceec
Q 043224 236 VECA-CGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEKN 295 (516)
Q Consensus 236 v~C~-Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEKn 295 (516)
|.-+ ||+.||..|- .+ |+..+ +.||-|+.++..+
T Consensus 14 v~~~~cGh~fc~~cI------------~~-------------~l~~~-~~CP~c~~~l~~~ 48 (56)
T d2baya1 14 VLSPKSRTIFEKSLL------------EQ-------------YVKDT-GNDPITNEPLSIE 48 (56)
T ss_dssp EEETTTTEEEEHHHH------------HH-------------HHHHH-SBCTTTCCBCCGG
T ss_pred CccCCCCCcccHHHH------------HH-------------HHhhc-cCCCccCCcCCHH
Confidence 5555 9999999884 23 44332 5799999988653
No 42
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.64 E-value=0.71 Score=34.00 Aligned_cols=39 Identities=21% Similarity=0.393 Sum_probs=30.5
Q ss_pred cccCCCCCccceecCCCCceeeccccccccccccccc--c--cccCC
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYS--N--GYIEV 324 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC~C~~~FCw~C~~~w~--C--~y~~~ 324 (516)
-.+|..|++.|.-. .++|+|+..||-...-+-. | .|+.+
T Consensus 25 ~~RC~~C~KKl~l~----~~~CrCg~~FC~~HR~pe~H~CtfDyK~~ 67 (74)
T d1wfla_ 25 KNRCFMCRKKVGLT----GFDCRCGNLFCGLHRYSDKHNCPYDYKAE 67 (74)
T ss_dssp TTBCSSSCCBCGGG----CEECTTSCEECSSSCSTTTTTCCCCGGGT
T ss_pred CCcChhhCCcccce----eeEccCCCEehhhcCCCcCcCCCCccccc
Confidence 35899999877764 2899999999999987755 8 56554
No 43
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=72.47 E-value=1.1 Score=33.00 Aligned_cols=39 Identities=23% Similarity=0.457 Sum_probs=30.1
Q ss_pred CcccCCCCCccceecCCCCceeeccccccccccccccc--c--cccC
Q 043224 281 HTKPCPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYS--N--GYIE 323 (516)
Q Consensus 281 ntK~CPkC~~~IEKn~GCnhMtC~C~~~FCw~C~~~w~--C--~y~~ 323 (516)
...+|..|++.|.-. .++|+|+..||-...-+-. | .|+.
T Consensus 24 kk~RC~~C~KKl~l~----~~~CrCg~~FC~~HR~pe~H~C~fDyK~ 66 (74)
T d1wfpa_ 24 TATRCLSCNKKVGVT----GFKCRCGSTFCGTHRYPESHECQFDFKG 66 (74)
T ss_dssp CCCBCSSSCCBCTTT----CEECTTSCEECTTTCSTTTSCCCSCTTS
T ss_pred CCCcChhcCCccCCC----ceecCCCChhhhccCCccCcCCCCcchh
Confidence 357899999877543 3899999999999997765 8 4544
No 44
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.12 E-value=2.3 Score=27.48 Aligned_cols=36 Identities=11% Similarity=0.103 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHh
Q 043224 56 MGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLV 92 (516)
Q Consensus 56 ~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~ 92 (516)
.+.|..+.+ +|.+.+.|+.-|+..+||.++.++.++
T Consensus 5 e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~Ll 40 (41)
T d1oqya1 5 ETMLTEIMS-MGYERERVVAALRASYNNPHRAVEYLL 40 (41)
T ss_dssp HHHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTTT
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 445666655 689999999999999999999887654
No 45
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.36 E-value=1.4 Score=34.66 Aligned_cols=11 Identities=27% Similarity=0.794 Sum_probs=9.9
Q ss_pred cCCcccccccc
Q 043224 239 ACGFQFCFSCS 249 (516)
Q Consensus 239 ~Cg~~fC~~C~ 249 (516)
+|||.||..|.
T Consensus 60 ~CgH~FH~~Ci 70 (114)
T d1v87a_ 60 KCSHAFHLLCL 70 (114)
T ss_dssp SSCCEECHHHH
T ss_pred CCCChhhHHHH
Confidence 59999999995
No 46
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.27 E-value=1.4 Score=33.26 Aligned_cols=32 Identities=28% Similarity=0.727 Sum_probs=23.3
Q ss_pred eecc-CCcccccccccccCCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccce
Q 043224 236 VECA-CGFQFCFSCSSVAHSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIE 293 (516)
Q Consensus 236 v~C~-Cg~~fC~~C~~~~H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IE 293 (516)
+... |||.|+..|. ..|+..+ ..||-|+.+..
T Consensus 52 ~~~~~C~H~FH~~Ci-------------------------~~Wl~~~-~~CP~CR~~~~ 84 (88)
T d3dplr1 52 VAWGVCNHAFHFHCI-------------------------SRWLKTR-QVCPLDNREWE 84 (88)
T ss_dssp EEEETTSCEEEHHHH-------------------------HHHHTTC-SBCSSSCSBCC
T ss_pred eEEccccCcccHHHH-------------------------HHHHHHC-CcCCCCCCccc
Confidence 5554 9999999994 2366555 57999998654
No 47
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=61.86 E-value=2 Score=31.09 Aligned_cols=34 Identities=24% Similarity=0.597 Sum_probs=27.7
Q ss_pred ccCCCCCccceecCCCCceee-cccc-----ccccccccccc
Q 043224 283 KPCPKCCKPIEKNGGCNMVRC-KCGI-----TFNWISGLEYS 318 (516)
Q Consensus 283 K~CPkC~~~IEKn~GCnhMtC-~C~~-----~FCw~C~~~w~ 318 (516)
-.||.|...++-.+| +..| .|.. -||--|..+-.
T Consensus 3 ~~CP~C~~eL~~~~~--~~~C~~C~~~~~~~a~CPdC~~~Le 42 (71)
T d2jnea1 3 LHCPQCQHVLDQDNG--HARCRSCGEFIEMKALCPDCHQPLQ 42 (71)
T ss_dssp CBCSSSCSBEEEETT--EEEETTTCCEEEEEEECTTTCSBCE
T ss_pred CcCCCccCcccccCC--CEehhhhhhhheeEEeCCccccHHH
Confidence 479999999999877 8999 6865 46888988754
No 48
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.94 E-value=10 Score=26.26 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHh
Q 043224 54 AQMGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLV 92 (516)
Q Consensus 54 ~~~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~ 92 (516)
.|++.|..++...|++..-+...|...+||-++.+..|.
T Consensus 6 ~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~ 44 (59)
T d1oaia_ 6 EQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFT 44 (59)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 467889999999999999999999999999999988876
No 49
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=58.77 E-value=6 Score=25.49 Aligned_cols=27 Identities=26% Similarity=0.518 Sum_probs=24.2
Q ss_pred cCCCHHHHHHHHHHhCCChHHHHHHHh
Q 043224 66 LSLKEKHARTLLIHYRWDVEKVFAVLV 92 (516)
Q Consensus 66 l~i~~~~a~~LL~~~~W~~~~l~e~~~ 92 (516)
.|.+.+.|+.-|.+.+||.+...+.+.
T Consensus 14 MGF~e~~A~~AL~k~~wnleaAtN~LL 40 (43)
T d2g3qa1 14 MGFTEEEAHNALEKCNWDLEAATNFLL 40 (43)
T ss_dssp TTSCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 478899999999999999999888776
No 50
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=54.96 E-value=18 Score=24.52 Aligned_cols=48 Identities=15% Similarity=0.096 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhhhChhHHHHHhC
Q 043224 57 GDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVEEGKDKLFAQAG 104 (516)
Q Consensus 57 ~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e~~~~~~~~~~g 104 (516)
+.|.++.+.+|.+.-++..-|...+||.++.++-+-+.+..+.-+.+|
T Consensus 6 ~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~Lr~kG~~~A~Kk~G 53 (54)
T d1efub3 6 SLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAG 53 (54)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHHHhcC
Confidence 457778899999999999999999999999998877555444444444
No 51
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=54.94 E-value=2.8 Score=26.92 Aligned_cols=23 Identities=30% Similarity=0.699 Sum_probs=16.0
Q ss_pred CcccCCCCCccceec--CCCCceee
Q 043224 281 HTKPCPKCCKPIEKN--GGCNMVRC 303 (516)
Q Consensus 281 ntK~CPkC~~~IEKn--~GCnhMtC 303 (516)
..++||.|+.+|.|. +|=.--.|
T Consensus 11 ~g~pC~~C~~~I~~~~~~gR~t~~C 35 (40)
T d1k3xa3 11 DGEPCERCGSIIEKTTLSSRPFYWC 35 (40)
T ss_dssp TTSBCTTTCCBCEEEEETTEEEEEC
T ss_pred CCCccCcCCCEEEEEEECCCCCEEC
Confidence 358999999999983 44333444
No 52
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}
Probab=54.49 E-value=1.2 Score=40.84 Aligned_cols=28 Identities=21% Similarity=0.512 Sum_probs=22.0
Q ss_pred cccCCCCCccceecC-CCCceee-cccccc
Q 043224 282 TKPCPKCCKPIEKNG-GCNMVRC-KCGITF 309 (516)
Q Consensus 282 tK~CPkC~~~IEKn~-GCnhMtC-~C~~~F 309 (516)
|..||+|+.+|.+.. .=|.-.| .|+|||
T Consensus 2 W~~C~~C~~~~~~~~l~~~~~vC~~C~~h~ 31 (263)
T d2f9yb1 2 WTKCDSCGQVLYRAELERNLEVCPKCDHHM 31 (263)
T ss_dssp EECCTTTCCCEETTHHHHTTTBCTTTCCBC
T ss_pred cCcCCCCcceeeHHHHHHhCCCCcCCCCCC
Confidence 478999999888753 3356688 799998
No 53
>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.05 E-value=14 Score=27.74 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 54 AQMGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 54 ~~~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
.+++.|..|+++.+-+.+.|.+-|.-.+-+.++.++.+.|
T Consensus 31 ~i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLE 70 (91)
T d1wj7a1 31 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLE 70 (91)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHh
Confidence 3577899999999999999999999999999999998885
No 54
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=53.28 E-value=2.2 Score=34.34 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=26.9
Q ss_pred CcccCCCCCccceecCCCCceee-ccccccccccccc
Q 043224 281 HTKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLE 316 (516)
Q Consensus 281 ntK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~ 316 (516)
+.+.|+.|+.+.....+ ....| .||..||-.|+..
T Consensus 47 ~~~~C~~C~~~f~~~~~-~~~~C~~C~~~~C~~C~~~ 82 (124)
T d1zbdb_ 47 GVNRCILCGEQLGMLGS-ASVVCEDCKKNVCTKCGVE 82 (124)
T ss_dssp SSSBCSSSCCBCSTTSC-CEEECTTTCCEEETTSEEE
T ss_pred CCCcCcccCCcccCCCC-CCCcCccCCcccccCCCCC
Confidence 46789999988765433 34689 7999999999754
No 55
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.51 E-value=2.3 Score=29.03 Aligned_cols=29 Identities=28% Similarity=0.851 Sum_probs=22.0
Q ss_pred cccccccccCCCCeeecCCC-CcccHHHHHHHH
Q 043224 124 CCNICCDDVSPQEVTTMDCG-HCFCNNCWTEHF 155 (516)
Q Consensus 124 ~C~IC~e~~~~~~~~~l~Cg-H~fC~~C~~~yl 155 (516)
-|.||.++ ..+.-+.|. ..||..||+..=
T Consensus 3 WC~ICneD---A~lrC~gCdgdLyC~rC~rE~H 32 (54)
T d2d8va1 3 WCCICNED---ATLRCAGCDGDLYCARCFREGH 32 (54)
T ss_dssp SCTTTCSC---CCEEETTTTSEEECSSHHHHHT
T ss_pred EeEEecCC---CceEecCCCCceehHHHHHHhc
Confidence 48999987 345556884 579999999764
No 56
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.58 E-value=1.6 Score=33.01 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=23.5
Q ss_pred cCcccCCCCCccceecCCCCceee-cccccccccccccc
Q 043224 280 SHTKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY 317 (516)
Q Consensus 280 ~ntK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w 317 (516)
..+..||-|.-.+..+.. ++- .|+|.||-.|+..|
T Consensus 3 ~~~~~C~IC~~~~~~~~~---~~~~~C~H~fC~~Cl~~~ 38 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQM---TTIAQCQCIFCTLCLKQY 38 (94)
T ss_dssp CSBCCCSSSCCCCBGGGE---EEETTTTEEEEHHHHHHH
T ss_pred CCCCcCccCCCcccCCce---EEECCCCCEeCCcCHHHH
Confidence 356789999766643221 333 58888888888765
No 57
>d2hf1a1 b.171.1.1 (A:2-60) Hypothetical protein CV3345 {Chromobacterium violaceum [TaxId: 536]}
Probab=51.01 E-value=3.8 Score=28.57 Aligned_cols=27 Identities=22% Similarity=0.504 Sum_probs=20.8
Q ss_pred ccCCCCCccceecCCCCceee-cccccc
Q 043224 283 KPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 283 K~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
-.||.|+.+++-+.+=+...| .|+..|
T Consensus 8 L~CP~ck~~L~~~~~~~~Lvc~~~~l~Y 35 (59)
T d2hf1a1 8 LVCPLCKGPLVFDKSKDELICKGDRLAF 35 (59)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred hcCCCCCCeeeEeCCCCEEecCCcCccc
Confidence 479999999997666667888 677544
No 58
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=49.78 E-value=4.1 Score=28.40 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=20.6
Q ss_pred cccCCCCCccceecCCCCceee-cccccc
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
.-.||.|+.+++-..+=+-..| .|+..|
T Consensus 10 iL~CP~ck~~L~~~~~~~~Lvc~~~~~~Y 38 (59)
T d2jnya1 10 VLACPKDKGPLRYLESEQLLVNERLNLAY 38 (59)
T ss_dssp CCBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred HhcCCCCCCEeEEeCCCCEEEcCccCccc
Confidence 4579999999986655556778 677554
No 59
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.39 E-value=3.2 Score=28.94 Aligned_cols=35 Identities=26% Similarity=0.766 Sum_probs=23.9
Q ss_pred ccCCCCCCCCceEeecCCCcceeecc-CCcccccccccccCCC
Q 043224 214 KWCPSVPHCGNAIQVEADELCEVECA-CGFQFCFSCSSVAHSP 255 (516)
Q Consensus 214 ~~CP~~p~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~~~H~p 255 (516)
+.|- +|...+. ......|+ |+..||..|-.=.|..
T Consensus 16 ~~C~---gC~~~l~----~~~~y~C~~C~~~FC~dCD~fiHe~ 51 (59)
T d1z60a1 16 RFCY---GCQGELK----DQHVYVCAVCQNVFCVDCDVFVHDS 51 (59)
T ss_dssp CEET---TTTEECT----TSEEECCTTTTCCBCHHHHHTTTTT
T ss_pred CCcc---CCCCcCC----CCceEECcCCCCccccccchhhhhh
Confidence 4675 6875542 12347897 9999999997666643
No 60
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779 {Pseudomonas fluorescens [TaxId: 294]}
Probab=48.65 E-value=4.8 Score=28.07 Aligned_cols=28 Identities=18% Similarity=0.511 Sum_probs=21.4
Q ss_pred cccCCCCCccceecCCCCceee-cccccc
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
.-.||.|+.+.+-...=+...| .|+..|
T Consensus 6 iL~CP~ck~~L~~~~~~~~Lvc~~~~laY 34 (59)
T d2pk7a1 6 ILACPICKGPLKLSADKTELISKGAGLAY 34 (59)
T ss_dssp TCCCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred heECCCCCCcceEeCCCCEEecCCcCccc
Confidence 3579999999987776677888 676543
No 61
>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=43.55 E-value=3.1 Score=24.34 Aligned_cols=19 Identities=26% Similarity=0.644 Sum_probs=14.9
Q ss_pred cccccccccccCCCCCchh
Q 043224 242 FQFCFSCSSVAHSPCSCLM 260 (516)
Q Consensus 242 ~~fC~~C~~~~H~p~~C~~ 260 (516)
..-||+|+++-|.--.|..
T Consensus 6 ~ikCfNCGkeGH~ar~CrA 24 (29)
T d1nc8a_ 6 VIRCWNCGKEGHSARQCRA 24 (29)
T ss_dssp CCBCTTTSCBSSCGGGCCS
T ss_pred eeEeecCCccchhhhhccC
Confidence 4569999999998777753
No 62
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.17 E-value=23 Score=26.17 Aligned_cols=50 Identities=22% Similarity=0.606 Sum_probs=34.0
Q ss_pred CCCcccccccccccCC---CCeeec--CCCCcccHHHHHHHHHhhhhcCCcccccccccccccc
Q 043224 119 CSSTFCCNICCDDVSP---QEVTTM--DCGHCFCNNCWTEHFIVKINDGQSRRIKCMALKCNVV 177 (516)
Q Consensus 119 ~~~~~~C~IC~e~~~~---~~~~~l--~CgH~fC~~C~~~yl~~~I~~g~~~~i~CP~~~C~~~ 177 (516)
......|.||.+++.. .+++.. .|+-..|+.|+.- .+++|. -.||. |+..
T Consensus 13 ~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEY----ErkeG~---q~Cpq--Ckt~ 67 (93)
T d1weoa_ 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY----ERREGT---QNCPQ--CKTR 67 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH----HHHTSC---SSCTT--TCCC
T ss_pred hcccchhhhcccccccCCCCCEEEEecccCCccchHHHHH----HHhccC---ccCcc--cCCh
Confidence 4456789999999753 233332 6888899999754 345665 36887 7754
No 63
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=41.61 E-value=23 Score=25.30 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=29.8
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 58 DLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 58 ~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
.|..+.+ +|.+...|+.-|+..++|++..++-+++
T Consensus 32 ~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls 66 (73)
T d1wiva_ 32 SVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFN 66 (73)
T ss_dssp HHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 3555554 7999999999999999999999998884
No 64
>d2cura1 g.39.1.3 (A:33-63) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.38 E-value=12 Score=22.12 Aligned_cols=30 Identities=17% Similarity=0.556 Sum_probs=20.2
Q ss_pred ccccccccCCCCeeecCCCCcccHHHHHHHH
Q 043224 125 CNICCDDVSPQEVTTMDCGHCFCNNCWTEHF 155 (516)
Q Consensus 125 C~IC~e~~~~~~~~~l~CgH~fC~~C~~~yl 155 (516)
|.-|-..+.. ..++.-=.|.||.+|++..+
T Consensus 2 C~~C~K~Lag-~rFTa~eDq~yCVdCYK~~v 31 (31)
T d2cura1 2 CVTCSKKLAG-QRFTAVEDQYYCVDCYKNFV 31 (31)
T ss_dssp CTTTCCBCTT-SCEEECSSCEEEHHHHHHHH
T ss_pred cccccchhcC-ceeEEecceEEEeeeecccC
Confidence 5566666543 33444557899999998764
No 65
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=40.77 E-value=5.4 Score=26.37 Aligned_cols=14 Identities=29% Similarity=0.686 Sum_probs=12.2
Q ss_pred cccCCCCCccceec
Q 043224 282 TKPCPKCCKPIEKN 295 (516)
Q Consensus 282 tK~CPkC~~~IEKn 295 (516)
.++||.|+.+|.|.
T Consensus 18 g~~C~~C~~~I~~~ 31 (47)
T d1tdza3 18 GEKCSRCGAEIQKI 31 (47)
T ss_dssp TSBCTTTCCBCEEE
T ss_pred CCCcCCCCcEEEEE
Confidence 47999999999984
No 66
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.22 E-value=19 Score=24.77 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=33.0
Q ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 57 GDLLRVMDLL-SLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 57 ~~i~~v~~~l-~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
+.|..+.+++ ++..+..+..|+..++|++..++.+.+
T Consensus 11 e~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~ 48 (59)
T d1wgla_ 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQ 48 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 4577888999 899999999999999999999998874
No 67
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.30 E-value=8.4 Score=26.69 Aligned_cols=37 Identities=22% Similarity=0.457 Sum_probs=25.7
Q ss_pred CcccccccccccCCCCeeec-CCCCcccHHHHHHHHHhh
Q 043224 121 STFCCNICCDDVSPQEVTTM-DCGHCFCNNCWTEHFIVK 158 (516)
Q Consensus 121 ~~~~C~IC~e~~~~~~~~~l-~CgH~fC~~C~~~yl~~~ 158 (516)
....|.-|...++....+.. .|++.||.+| .-|+...
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dC-D~fiHe~ 51 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDC-DVFVHDS 51 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHH-HHTTTTT
T ss_pred CCCCccCCCCcCCCCceEECcCCCCcccccc-chhhhhh
Confidence 34579899888765444443 8999999999 3445443
No 68
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=38.16 E-value=6.3 Score=25.63 Aligned_cols=14 Identities=36% Similarity=0.857 Sum_probs=12.1
Q ss_pred cccCCCCCccceec
Q 043224 282 TKPCPKCCKPIEKN 295 (516)
Q Consensus 282 tK~CPkC~~~IEKn 295 (516)
.++||+|+.+|.+.
T Consensus 16 g~~C~~C~~~I~~~ 29 (44)
T d1k82a3 16 GEPCRVCGTPIVAT 29 (44)
T ss_dssp TSBCTTTCCBCEEE
T ss_pred CCCcCCCCCEEEEE
Confidence 47999999999983
No 69
>d1odha_ d.239.1.1 (A:) Mgcm1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.46 E-value=12 Score=30.78 Aligned_cols=34 Identities=26% Similarity=0.683 Sum_probs=24.0
Q ss_pred CCCCCchhHHHHhHHhHHHHHHHHHHhcCcccCCCCCccceecCCCCceee--cccc
Q 043224 253 HSPCSCLMWELWSKKFEVESLSLNWISSHTKPCPKCCKPIEKNGGCNMVRC--KCGI 307 (516)
Q Consensus 253 H~p~~C~~~~~w~~k~~~e~~~~~wi~~ntK~CPkC~~~IEKn~GCnhMtC--~C~~ 307 (516)
=+|.+|+...+- +..|+||+|+.+++ ++.| .|||
T Consensus 83 lRPAicdkAR~K---------------Q~~k~CpnC~g~L~------~~~Crgh~Gy 118 (158)
T d1odha_ 83 LRPAICDKARQK---------------QQRKSCPNCNGPLK------LIPCRGHGGF 118 (158)
T ss_dssp ECCCSSHHHHHH---------------HHHSBCSSSCCBEE------EECCCTBTTB
T ss_pred echHHHHHHHHH---------------HhcCCCCCCCCcee------EEeccCccCC
Confidence 369999876431 22489999998887 5778 4765
No 70
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=36.81 E-value=6.7 Score=25.70 Aligned_cols=14 Identities=50% Similarity=1.175 Sum_probs=12.1
Q ss_pred cccCCCCCccceec
Q 043224 282 TKPCPKCCKPIEKN 295 (516)
Q Consensus 282 tK~CPkC~~~IEKn 295 (516)
-++||+|+.+|.+.
T Consensus 18 g~~C~~C~~~I~~~ 31 (46)
T d1r2za3 18 GNPCKRCGTPIEKT 31 (46)
T ss_dssp TSBCTTTCCBCEEE
T ss_pred CCccCCCCCeEEEE
Confidence 47999999999973
No 71
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=36.59 E-value=37 Score=23.01 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhhhC
Q 043224 56 MGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVEEG 95 (516)
Q Consensus 56 ~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e~~ 95 (516)
.+.|.++.+.+|.+.-++..-|...+||.++.++-+-+.+
T Consensus 5 ~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~LrkkG 44 (56)
T d1xb2b1 5 KELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQA 44 (56)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4567888999999999999999999999999998776543
No 72
>d1qxfa_ g.41.8.4 (A:) Ribosomal protein S27e {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=36.26 E-value=12 Score=25.79 Aligned_cols=30 Identities=23% Similarity=0.481 Sum_probs=22.7
Q ss_pred ccCCCCCCCCceEeecCCCcceeecc-CCccccc
Q 043224 214 KWCPSVPHCGNAIQVEADELCEVECA-CGFQFCF 246 (516)
Q Consensus 214 ~~CP~~p~C~~~i~~~~~~~~~v~C~-Cg~~fC~ 246 (516)
..|| +|++.-.+-......|.|. ||+..|.
T Consensus 8 VkC~---~C~n~~ivFsha~t~V~C~~Cg~~L~~ 38 (58)
T d1qxfa_ 8 VKCP---DCEHEQVIFDHPSTIVKCIICGRTVAE 38 (58)
T ss_dssp EECT---TTCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred eECC---CCCCeEEEEecCceEEEccccCCEEec
Confidence 3588 8999877655555679997 9998875
No 73
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.22 E-value=8.9 Score=28.71 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=25.5
Q ss_pred cccCCCCCccceecCCCCceee-cccccccccccccc
Q 043224 282 TKPCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY 317 (516)
Q Consensus 282 tK~CPkC~~~IEKn~GCnhMtC-~C~~~FCw~C~~~w 317 (516)
-..|..|++..- -.=-.-.| .||..||..|....
T Consensus 9 ~s~C~~C~~~Fs--~~~rrhhCr~CG~vfC~~Cs~~~ 43 (88)
T d1wfka_ 9 ESRCYGCAVKFT--LFKKEYGCKNCGRAFCNGCLSFS 43 (88)
T ss_dssp CSBCTTTCCBCC--SSSCEEECSSSCCEEETTTSCEE
T ss_pred cCcCcccCchhc--cccccccccccChhhChHHhCCc
Confidence 357999998763 22335789 69999999999853
No 74
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.12 E-value=26 Score=23.63 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHhCCChHHHHHHHh
Q 043224 53 AAQMGDLLRVMDLL-SLKEKHARTLLIHYRWDVEKVFAVLV 92 (516)
Q Consensus 53 ~~~~~~i~~v~~~l-~i~~~~a~~LL~~~~W~~~~l~e~~~ 92 (516)
++.++.+..+.+++ ++..+.....|...+|+++..++.+.
T Consensus 10 ~e~~e~~~~Lk~MFP~~D~~VI~~VL~a~~G~vd~aidaLL 50 (54)
T d1mn3a_ 10 NERKDTLNTLQNMFPDMDPSLIEDVCIAKKSRIEPCVDALL 50 (54)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHSCSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34566789999999 89999999999999999999988775
No 75
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.05 E-value=57 Score=25.81 Aligned_cols=24 Identities=8% Similarity=-0.063 Sum_probs=15.7
Q ss_pred CCccccCHHHHHHHHHHHHHHHHH
Q 043224 41 ASSMVIPKESLLAAQMGDLLRVMD 64 (516)
Q Consensus 41 ~~~~vlt~~~i~~~~~~~i~~v~~ 64 (516)
....+||+=+..+.+-....+++.
T Consensus 52 ~T~p~lTkYE~arilG~Ra~Qi~~ 75 (127)
T d1qkla_ 52 ITTPYMTKYERARVLGTRALQIAM 75 (127)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCcccHHHHHHHHHHHHHHHhc
Confidence 345778887777776666665543
No 76
>d2cu8a1 g.39.1.3 (A:8-37) Cysteine-rich (intestinal) protein, CRP, CRIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.95 E-value=6.1 Score=23.53 Aligned_cols=12 Identities=42% Similarity=0.955 Sum_probs=9.4
Q ss_pred cccCCCCCccce
Q 043224 282 TKPCPKCCKPIE 293 (516)
Q Consensus 282 tK~CPkC~~~IE 293 (516)
+..||+|+.++-
T Consensus 2 ~~~CprC~K~VY 13 (30)
T d2cu8a1 2 ASKCPKCDKTVY 13 (30)
T ss_dssp CCBCTTTCCBCC
T ss_pred CCcCCCCCCcee
Confidence 468999998763
No 77
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.90 E-value=31 Score=24.57 Aligned_cols=29 Identities=10% Similarity=0.163 Sum_probs=26.5
Q ss_pred HcCCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 65 LLSLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 65 ~l~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
-+|.+...|+.-|+..++|+++.++.+++
T Consensus 38 ~MGF~~~~a~~AL~~~~~n~e~A~~~Ll~ 66 (73)
T d1vg5a_ 38 AMGFDRTQVEVALAAADDDLTVAVEILMS 66 (73)
T ss_dssp TTTCCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred HhCCCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 46899999999999999999999998884
No 78
>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.90 E-value=5 Score=26.45 Aligned_cols=26 Identities=31% Similarity=0.758 Sum_probs=20.3
Q ss_pred ccCCCCCcccee------cCCCCceee--ccccc
Q 043224 283 KPCPKCCKPIEK------NGGCNMVRC--KCGIT 308 (516)
Q Consensus 283 K~CPkC~~~IEK------n~GCnhMtC--~C~~~ 308 (516)
-.|-+|+++.+| .-|..|+.| .|-..
T Consensus 14 v~Ca~Ckk~lqKGQTAyqrkGs~~LFCSt~Cl~~ 47 (49)
T d2dasa1 14 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSS 47 (49)
T ss_dssp CBCTTTCCBCCTTSCCEECTTCCCEESSHHHHHH
T ss_pred eEecccchHHhccchHHhhCCCcceeEcchhhcc
Confidence 468899999987 479999999 37443
No 79
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=31.68 E-value=14 Score=23.45 Aligned_cols=16 Identities=31% Similarity=0.885 Sum_probs=10.1
Q ss_pred cccccccccCCCCCch
Q 043224 244 FCFSCSSVAHSPCSCL 259 (516)
Q Consensus 244 fC~~C~~~~H~p~~C~ 259 (516)
-||+|+..-|.-..|.
T Consensus 3 ~C~~Cg~~GH~~~~Cp 18 (42)
T d2exfa1 3 KCFNCGKEGHTARNCR 18 (42)
T ss_dssp CCTTTCCSSSCTTTCS
T ss_pred ccccCCCcCcCcccCc
Confidence 3666666666666664
No 80
>d1rmda1 g.37.1.1 (A:87-116) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.68 E-value=7.7 Score=22.86 Aligned_cols=23 Identities=35% Similarity=0.427 Sum_probs=18.0
Q ss_pred cccccccccccccCHHHHHHhhC
Q 043224 166 RIKCMALKCNVVCDEAKIRCLVS 188 (516)
Q Consensus 166 ~i~CP~~~C~~~i~~~~i~~ll~ 188 (516)
.++||...|...++.+.....++
T Consensus 2 ~vkCp~keC~eEvsleKYnhHvS 24 (30)
T d1rmda1 2 MVKCPAQDCNEEVSLEKYNHHVS 24 (30)
T ss_dssp EEECCSTTCCCEEEHHHHHHHHH
T ss_pred ccccccccccchhchhhhcchhh
Confidence 47999999999888776665554
No 81
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.58 E-value=10 Score=26.41 Aligned_cols=32 Identities=25% Similarity=0.589 Sum_probs=22.1
Q ss_pred cccccccccccCCCCe-e-ecCCCCcccHHHHHH
Q 043224 122 TFCCNICCDDVSPQEV-T-TMDCGHCFCNNCWTE 153 (516)
Q Consensus 122 ~~~C~IC~e~~~~~~~-~-~l~CgH~fC~~C~~~ 153 (516)
...|.+|-..|....- . --.||+.||..|...
T Consensus 8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~ 41 (64)
T d1joca1 8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 41 (64)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCcCcCcCCcccCCccccchhhhCCeecccccCC
Confidence 4569999888754321 1 127999999999643
No 82
>d2a1jb1 a.60.2.5 (B:219-296) DNA excision repair protein ERCC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.48 E-value=41 Score=23.95 Aligned_cols=52 Identities=23% Similarity=0.419 Sum_probs=31.0
Q ss_pred HHHHHHHHHH-HHHHHH----HcCCCHHHHHHHHHHhCCChHHHHHHHhhhChhHHHHHhCc
Q 043224 49 ESLLAAQMGD-LLRVMD----LLSLKEKHARTLLIHYRWDVEKVFAVLVEEGKDKLFAQAGV 105 (516)
Q Consensus 49 ~~i~~~~~~~-i~~v~~----~l~i~~~~a~~LL~~~~W~~~~l~e~~~e~~~~~~~~~~gl 105 (516)
+-|....+.. +.++.+ |=+|.+..|..|+.+|+ +.+.+.. .+.+.+..--|+
T Consensus 3 daike~~~~~~~~~~~~~L~~I~gIg~~~a~~L~~~F~-s~~~i~~----A~~eeL~~i~Gi 59 (78)
T d2a1jb1 3 DLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFG-SLEQLIA----ASREDLALCPGL 59 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHS-SHHHHHS----CCHHHHHTSSSC
T ss_pred hHHHHHHcCCcHHHHHHHhcCCCCcCHHHHHHHHHHhC-CcHHHHh----hhHHHHHHhhhh
Confidence 3344333333 444444 44788999999999998 5555543 455555544343
No 83
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=31.17 E-value=12 Score=25.54 Aligned_cols=14 Identities=43% Similarity=1.251 Sum_probs=12.1
Q ss_pred cccCCCCCccceec
Q 043224 282 TKPCPKCCKPIEKN 295 (516)
Q Consensus 282 tK~CPkC~~~IEKn 295 (516)
.++||.|+.+|.+.
T Consensus 25 g~~C~~C~~~I~~~ 38 (56)
T d1ee8a3 25 GLPCPACGRPVERR 38 (56)
T ss_dssp TSBCTTTCCBCEEE
T ss_pred CcccccCCceEEEE
Confidence 47999999999974
No 84
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.11 E-value=43 Score=26.09 Aligned_cols=35 Identities=26% Similarity=0.633 Sum_probs=24.6
Q ss_pred CcccCCCCCCCCceEeecCCCcceeecc-CCcccccccccc
Q 043224 212 RVKWCPSVPHCGNAIQVEADELCEVECA-CGFQFCFSCSSV 251 (516)
Q Consensus 212 ~~~~CP~~p~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~~ 251 (516)
...-|+ .|+..+..-. .....|. ||..||..|+..
T Consensus 47 ~~~~C~---~C~~~f~~~~--~~~~~C~~C~~~~C~~C~~~ 82 (124)
T d1zbdb_ 47 GVNRCI---LCGEQLGMLG--SASVVCEDCKKNVCTKCGVE 82 (124)
T ss_dssp SSSBCS---SSCCBCSTTS--CCEEECTTTCCEEETTSEEE
T ss_pred CCCcCc---ccCCcccCCC--CCCCcCccCCcccccCCCCC
Confidence 455687 6887655322 2347897 999999999854
No 85
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=30.66 E-value=12 Score=24.98 Aligned_cols=27 Identities=30% Similarity=0.701 Sum_probs=16.3
Q ss_pred CcccCCCCCcc-ceecCCCCceee-cccc
Q 043224 281 HTKPCPKCCKP-IEKNGGCNMVRC-KCGI 307 (516)
Q Consensus 281 ntK~CPkC~~~-IEKn~GCnhMtC-~C~~ 307 (516)
..+.||.|+.. |.-+..=--+.| .||.
T Consensus 4 ~~~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~ 32 (50)
T d1pfta_ 4 KQKVCPACESAELIYDPERGEIVCAKCGY 32 (50)
T ss_dssp SCCSCTTTSCCCEEEETTTTEEEESSSCC
T ss_pred ccccCcCCCCCcEEEECCCCeEecccCCc
Confidence 35789999763 444321126788 6774
No 86
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=30.44 E-value=10 Score=27.39 Aligned_cols=30 Identities=23% Similarity=0.699 Sum_probs=24.4
Q ss_pred cCcccCCCCCccceecCCCCceee-cccccc
Q 043224 280 SHTKPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 280 ~ntK~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
...-.||.|+..-.|..+----.| +|++.|
T Consensus 25 ~~ky~Cp~Cgk~~vkR~a~GIW~C~kC~~~~ 55 (73)
T d1vqoz1 25 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKF 55 (73)
T ss_dssp HSCBCCSSSSCSCEEEEETTEEEETTTCCEE
T ss_pred hCCccCCCCCCceeEEEEEEEEECCCCCCEE
Confidence 456799999998888777777888 788876
No 87
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=29.53 E-value=73 Score=21.09 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=34.5
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhhhC
Q 043224 56 MGDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVEEG 95 (516)
Q Consensus 56 ~~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e~~ 95 (516)
.+.|.++.+.+|.+..++.--|...++|.++.++-+-+.+
T Consensus 3 ~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~Lr~~G 42 (52)
T d1aipc1 3 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERG 42 (52)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 3567888999999999999999999999999988776433
No 88
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.45 E-value=8.4 Score=28.76 Aligned_cols=28 Identities=21% Similarity=0.653 Sum_probs=18.4
Q ss_pred cccCCCCCc------cceecCCCCceee-cccccc
Q 043224 282 TKPCPKCCK------PIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 282 tK~CPkC~~------~IEKn~GCnhMtC-~C~~~F 309 (516)
+=.||.|+- .|.|..|=-+++| .||..|
T Consensus 23 ~F~CPfCnh~~sV~vk~dkk~~~g~l~C~vCg~~~ 57 (85)
T d1wiia_ 23 QFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEF 57 (85)
T ss_dssp CCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEE
T ss_pred eEcCCCCCCCCeEEEEEEecCCEEEEEEecCCCeE
Confidence 457999872 3345667667888 577555
No 89
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=29.33 E-value=11 Score=27.25 Aligned_cols=29 Identities=28% Similarity=0.668 Sum_probs=23.2
Q ss_pred CcccCCCCCccceecCCCCceee-cccccc
Q 043224 281 HTKPCPKCCKPIEKNGGCNMVRC-KCGITF 309 (516)
Q Consensus 281 ntK~CPkC~~~IEKn~GCnhMtC-~C~~~F 309 (516)
..-.||.|+..--|..+.---.| +|++.|
T Consensus 26 ~ky~Cp~Cgk~~vkR~a~GIW~C~kC~~~~ 55 (73)
T d1jj2y_ 26 KKHKCPVCGFKKLKRAGTGIWMCGHCGYKI 55 (73)
T ss_dssp SCBCCSSSCCSCEEEEETTEEEETTTCCEE
T ss_pred CCccCCCCCCCceEEEEEEEEECCCCCCEE
Confidence 45689999988777777777888 688776
No 90
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=28.76 E-value=11 Score=20.89 Aligned_cols=18 Identities=33% Similarity=0.785 Sum_probs=15.2
Q ss_pred ccccccccccCCCCCchh
Q 043224 243 QFCFSCSSVAHSPCSCLM 260 (516)
Q Consensus 243 ~fC~~C~~~~H~p~~C~~ 260 (516)
-.||.|+..-|....|..
T Consensus 3 pvcfscgktghikkdck~ 20 (26)
T d1dsqa_ 3 PVCFSCGKTGHIKRDCKE 20 (26)
T ss_dssp CBCTTTCCBSSCTTTTTC
T ss_pred CEEEecCCcccchhhhhh
Confidence 369999999999888864
No 91
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.21 E-value=26 Score=25.70 Aligned_cols=34 Identities=15% Similarity=0.483 Sum_probs=25.1
Q ss_pred CCcccccccccccCCCCeeec-CCCCcccHHHHHHH
Q 043224 120 SSTFCCNICCDDVSPQEVTTM-DCGHCFCNNCWTEH 154 (516)
Q Consensus 120 ~~~~~C~IC~e~~~~~~~~~l-~CgH~fC~~C~~~y 154 (516)
.....|.|| +-+..+..+.. -|+-.|...|+++.
T Consensus 13 ~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence 356789999 55555555544 68889999999975
No 92
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=26.34 E-value=14 Score=26.91 Aligned_cols=17 Identities=24% Similarity=0.651 Sum_probs=14.1
Q ss_pred cccHHHHHHHHHhhhhc
Q 043224 145 CFCNNCWTEHFIVKIND 161 (516)
Q Consensus 145 ~fC~~C~~~yl~~~I~~ 161 (516)
-||++|+..|+...-.+
T Consensus 39 GFCRNCLskWy~~~a~~ 55 (79)
T d2o35a1 39 GFCRNCLSNWYREAAEA 55 (79)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 49999999998877654
No 93
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.85 E-value=56 Score=22.33 Aligned_cols=29 Identities=17% Similarity=0.354 Sum_probs=26.0
Q ss_pred cCCCHHHHHHHHHHhCCChHHHHHHHhhh
Q 043224 66 LSLKEKHARTLLIHYRWDVEKVFAVLVEE 94 (516)
Q Consensus 66 l~i~~~~a~~LL~~~~W~~~~l~e~~~e~ 94 (516)
+|.+...|+.-|+..+.|.++.++-+++.
T Consensus 19 MGF~~~~a~~AL~~~~~~~e~A~~wL~~~ 47 (63)
T d1wjia_ 19 MGFSKEASRQALMDNGNNLEAALNVLLTS 47 (63)
T ss_dssp TTCCHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCHHHHHHHHHHC
Confidence 49999999999999999999999988853
No 94
>d1z67a1 a.259.1.1 (A:3-131) Hypothetical protein YidB {Shigella flexneri [TaxId: 623]}
Probab=23.42 E-value=42 Score=26.71 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=38.1
Q ss_pred ccccCHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHh
Q 043224 43 SMVIPKESLLAAQMGD-LLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLV 92 (516)
Q Consensus 43 ~~vlt~~~i~~~~~~~-i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~ 92 (516)
-.-+++++|.+.+-.+ |++++..+|++++++...|..+ .-.+++++.
T Consensus 56 N~pIs~~ql~~~lG~d~l~~lA~q~Gl~~~~~~~~LA~~---LP~~Vd~lT 103 (129)
T d1z67a1 56 NQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQ---LPKIIDALS 103 (129)
T ss_dssp CCCCCHHHHHHHHCHHHHHHHHHHHTCCHHHHHHHHHHH---HHHHHHHTC
T ss_pred CCCCCHHHHHHHhCHHHHHHHHHHHCcCHHHHHHHHHHH---hHHHHhccC
Confidence 4779999999999776 9999999999999999988755 444555543
No 95
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.33 E-value=9.5 Score=24.70 Aligned_cols=27 Identities=15% Similarity=0.470 Sum_probs=21.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhhhh
Q 043224 377 SKDFGWIKDGLNKLFRARRILSFSYPF 403 (516)
Q Consensus 377 ~~~~~fl~~a~~~l~~~R~~L~~sY~~ 403 (516)
..++.||..++...=..-..+.|||+|
T Consensus 6 ~eEv~YL~~GVK~~G~~WNsILWs~PF 32 (49)
T d1x58a1 6 KEEVNYLFHGVKTMGNHWNSILWSFPF 32 (49)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhcchhhhhhhccCC
Confidence 346788888888877777888999996
No 96
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.99 E-value=20 Score=23.77 Aligned_cols=28 Identities=32% Similarity=0.781 Sum_probs=18.7
Q ss_pred CCCceEeecCCCcceeecc-CCcccccccccc
Q 043224 221 HCGNAIQVEADELCEVECA-CGFQFCFSCSSV 251 (516)
Q Consensus 221 ~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~~ 251 (516)
.|+..+..- .....|. ||..||..|...
T Consensus 5 ~C~~~F~~~---~rkhhCr~CG~~fC~~Cs~~ 33 (51)
T d1y02a2 5 SCGAHFANT---ARKQTCLDCKKNFCMTCSSQ 33 (51)
T ss_dssp TTCCCCSSG---GGCEECTTTCCEECGGGEEC
T ss_pred ccCCcccCC---ccCcccccCCcccCccccCC
Confidence 465544322 2347896 999999999643
No 97
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.87 E-value=39 Score=24.22 Aligned_cols=30 Identities=27% Similarity=0.536 Sum_probs=21.8
Q ss_pred CCcccccccccccCCCCeeecCCCCcccHHH
Q 043224 120 SSTFCCNICCDDVSPQEVTTMDCGHCFCNNC 150 (516)
Q Consensus 120 ~~~~~C~IC~e~~~~~~~~~l~CgH~fC~~C 150 (516)
....-|.+|--.+... .+...||+.||...
T Consensus 23 ~kk~RC~~C~KKl~l~-~~~CrCg~~FC~~H 52 (74)
T d1wfpa_ 23 STATRCLSCNKKVGVT-GFKCRCGSTFCGTH 52 (74)
T ss_dssp CCCCBCSSSCCBCTTT-CEECTTSCEECTTT
T ss_pred CCCCcChhcCCccCCC-ceecCCCChhhhcc
Confidence 3456799998776543 35679999999753
No 98
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.71 E-value=24 Score=24.62 Aligned_cols=27 Identities=30% Similarity=0.571 Sum_probs=19.0
Q ss_pred CCCceEeecCCCcceeecc-CCccccccccc
Q 043224 221 HCGNAIQVEADELCEVECA-CGFQFCFSCSS 250 (516)
Q Consensus 221 ~C~~~i~~~~~~~~~v~C~-Cg~~fC~~C~~ 250 (516)
.|+..+..- .....|. ||..||..|..
T Consensus 10 ~C~~~F~~~---~rkhhCr~CG~~fC~~Cs~ 37 (67)
T d1vfya_ 10 ICSKKFSLL---NRKHHCRSCGGVFCQEHSS 37 (67)
T ss_dssp TTCCBCBTT---BCCEECTTTCCEECGGGSC
T ss_pred cCCCcccCc---ccccccccCCCEecccccC
Confidence 576655432 2357896 99999999963
No 99
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.04 E-value=11 Score=21.47 Aligned_cols=12 Identities=33% Similarity=0.794 Sum_probs=9.4
Q ss_pred ccCCCCCcccee
Q 043224 283 KPCPKCCKPIEK 294 (516)
Q Consensus 283 K~CPkC~~~IEK 294 (516)
-+||.|...|-+
T Consensus 3 ~qcphc~tiiar 14 (28)
T d2ct1a1 3 FHCPHCDTVIAR 14 (28)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCcchhheee
Confidence 369999988865
No 100
>d1ufza_ a.5.9.1 (A:) HBS1-like protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.90 E-value=1e+02 Score=22.29 Aligned_cols=47 Identities=17% Similarity=0.312 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 46 IPKESLLAAQMGDLLRVMDLLS--LKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 46 lt~~~i~~~~~~~i~~v~~~l~--i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
|+..+= .++..=+.+|.+++| ||.....-.-+++++|.++.++.+++
T Consensus 26 Ls~~d~-aRL~SCldqmR~VvGDsvpe~~lv~avlk~dydvekALd~vL~ 74 (83)
T d1ufza_ 26 LSEIDQ-ARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLE 74 (83)
T ss_dssp CCHHHH-HHHHHHHHHHHHHTTTTSCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cCHHHH-HHHHHHHHHHHHHHcccCCHHHHHHHHHHccCCHHHHHHHHHh
Confidence 444332 344566888999996 78888888888999999999998884
No 101
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.22 E-value=71 Score=21.85 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCChHHHHHHHhh
Q 043224 57 GDLLRVMDLLSLKEKHARTLLIHYRWDVEKVFAVLVE 93 (516)
Q Consensus 57 ~~i~~v~~~l~i~~~~a~~LL~~~~W~~~~l~e~~~e 93 (516)
+.|..+.+ +|.+...|+.-|+..+||++..++-+++
T Consensus 21 ~~v~~L~~-MGF~~~~a~~AL~~~~~n~e~A~~~Lls 56 (63)
T d1wgna_ 21 QCVETVVN-MGYSYECVLRAMKKKGENIEQILDYLFA 56 (63)
T ss_dssp HHHHHHHH-HHCCHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 34555543 5889999999999999999999998884
No 102
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.13 E-value=51 Score=24.20 Aligned_cols=28 Identities=21% Similarity=0.545 Sum_probs=21.9
Q ss_pred ccccccccccCCCCeeecCCCCcccHHH
Q 043224 123 FCCNICCDDVSPQEVTTMDCGHCFCNNC 150 (516)
Q Consensus 123 ~~C~IC~e~~~~~~~~~l~CgH~fC~~C 150 (516)
.-|.+|--.+.....+...||+.||...
T Consensus 26 ~RC~~C~KKl~l~~~~~CrCg~~FC~~H 53 (85)
T d1wffa_ 26 KHCFLCGKKTGLATSFECRCGNNFCASH 53 (85)
T ss_dssp CBCSSSCCBCSSSSCEECTTCCEECTTT
T ss_pred CcChhcCCeecCCcCeecCCCCEehhhc
Confidence 4799999887654457789999999764
No 103
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=20.15 E-value=15 Score=28.32 Aligned_cols=8 Identities=63% Similarity=1.759 Sum_probs=4.3
Q ss_pred ee-cccccc
Q 043224 302 RC-KCGITF 309 (516)
Q Consensus 302 tC-~C~~~F 309 (516)
.| +||+.|
T Consensus 69 ~CrkCGfvF 77 (105)
T d2gmga1 69 QCRKCGFVF 77 (105)
T ss_dssp BBTTTCCBC
T ss_pred hhhhcCCee
Confidence 35 455555
No 104
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=22 Score=22.13 Aligned_cols=29 Identities=28% Similarity=0.823 Sum_probs=20.6
Q ss_pred ccccccccccCCCCeeecCCCCcccHHHH
Q 043224 123 FCCNICCDDVSPQEVTTMDCGHCFCNNCW 151 (516)
Q Consensus 123 ~~C~IC~e~~~~~~~~~l~CgH~fC~~C~ 151 (516)
+.|.+|-..+|..+-++.+=....|..|-
T Consensus 1 FvC~vCr~pFP~GDRVTFnGKeC~CQ~Cs 29 (40)
T d1v6ga2 1 FVCAVCRLPFPPGDRVTFNGKECMCQKCS 29 (40)
T ss_dssp SSCSSSCCCCCSSSCEEEETTEEEEHHHH
T ss_pred CcccccCCCCCCCCeEEEcCceeehhhcC
Confidence 46999999999887766543344666664
Done!